BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011868
(476 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 197/333 (59%), Gaps = 46/333 (13%)
Query: 3 IAEK-KQEG-MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQ 60
+AEK K +G +++G Y LG TLG G FGKVK + +G AVKIL + +I L + +
Sbjct: 3 MAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK 62
Query: 61 IKREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF 120
I+REI LKL +HP++++L++V+++ S I+MV+EYV+GGELFD I GRL E E R+LF
Sbjct: 63 IRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLF 122
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
QQ++ GV YCH V HRDLK EN+
Sbjct: 123 QQILSGVDYCHRHMVVHRDLKP-----------------------------------ENV 147
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
LLD+ N KI+DFGLS + D L +CGSPNY APEV++ R Y G DIWS GV
Sbjct: 148 LLDAHMNAKIADFGLSNM---MSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGV 204
Query: 241 ILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
ILY +L G LPFDD ++ L++KI G F P++L+P +LL+ +L+ +P+KR TI I
Sbjct: 205 ILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
Query: 301 KADEWFEQDYT----PANPDDDEEDIFVDNEAF 329
+ EWF+QD P +P +D+EA
Sbjct: 265 REHEWFKQDLPKYLFPEDP--SYSSTMIDDEAL 295
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 184/304 (60%), Gaps = 39/304 (12%)
Query: 7 KQEG-MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
K +G +++G Y LG TLG G FGKVK + +G AVKIL + +I L + +IKREI
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 66 ATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID 125
LKL +HP++++L++V+++ + +MV+EYV+GGELFD I GR++E E R+LFQQ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS 122
Query: 126 GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK 185
V YCH V HRDLK EN+LLD+
Sbjct: 123 AVDYCHRHMVVHRDLKP-----------------------------------ENVLLDAH 147
Query: 186 GNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
N KI+DFGLS + D L T+CGSPNY APEV++ R Y G DIWSCGVILY +
Sbjct: 148 MNAKIADFGLSNM---MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
L G LPFDD ++ L++KI G F +P++L+ LL +L+ +P+KR TI I+ EW
Sbjct: 205 LCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW 264
Query: 306 FEQD 309
F+QD
Sbjct: 265 FKQD 268
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 183/304 (60%), Gaps = 39/304 (12%)
Query: 7 KQEG-MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
K +G +++G Y LG TLG G FGKVK + +G AVKIL + +I L + +IKREI
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 66 ATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID 125
LKL +HP++++L++V+++ + +MV+EYV+GGELFD I GR++E E R+LFQQ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS 122
Query: 126 GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK 185
V YCH V HRDLK EN+LLD+
Sbjct: 123 AVDYCHRHMVVHRDLKP-----------------------------------ENVLLDAH 147
Query: 186 GNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
N KI+DFGLS + D L +CGSPNY APEV++ R Y G DIWSCGVILY +
Sbjct: 148 MNAKIADFGLSNM---MSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
L G LPFDD ++ L++KI G F +P++L+ LL +L+ +P+KR TI I+ EW
Sbjct: 205 LCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW 264
Query: 306 FEQD 309
F+QD
Sbjct: 265 FKQD 268
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 182/301 (60%), Gaps = 39/301 (12%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
+G +G Y++ +TLGEG+FGKVK A +G A+KI+ K + + +I+REI+ L
Sbjct: 9 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 68
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
+LL+HP++++L++V+ SK +I MV+EY G ELFD I + ++ E E R+ FQQ+I V
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
YCH + HRDLK EN+LLD N+
Sbjct: 128 YCHRHKIVHRDLKP-----------------------------------ENLLLDEHLNV 152
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
KI+DFGLS + D L T+CGSPNY APEV++ + Y G D+WSCGVILYV+L
Sbjct: 153 KIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 249 YLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
LPFDD ++ VL++ I G + LPK+LSPGA L++++L NP+ RI+I I D+WF+
Sbjct: 210 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 269
Query: 309 D 309
D
Sbjct: 270 D 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 182/301 (60%), Gaps = 39/301 (12%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
+G +G Y++ +TLGEG+FGKVK A +G A+KI+ K + + +I+REI+ L
Sbjct: 8 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 67
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
+LL+HP++++L++V+ SK +I MV+EY G ELFD I + ++ E E R+ FQQ+I V
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
YCH + HRDLK EN+LLD N+
Sbjct: 127 YCHRHKIVHRDLKP-----------------------------------ENLLLDEHLNV 151
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
KI+DFGLS + D L T+CGSPNY APEV++ + Y G D+WSCGVILYV+L
Sbjct: 152 KIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 249 YLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
LPFDD ++ VL++ I G + LPK+LSPGA L++++L NP+ RI+I I D+WF+
Sbjct: 209 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268
Query: 309 D 309
D
Sbjct: 269 D 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 182/301 (60%), Gaps = 39/301 (12%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
+G +G Y++ +TLGEG+FGKVK A +G A+KI+ K + + +I+REI+ L
Sbjct: 3 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 62
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
+LL+HP++++L++V+ SK +I MV+EY G ELFD I + ++ E E R+ FQQ+I V
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
YCH + HRDLK EN+LLD N+
Sbjct: 122 YCHRHKIVHRDLKP-----------------------------------ENLLLDEHLNV 146
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
KI+DFGLS + D L T+CGSPNY APEV++ + Y G D+WSCGVILYV+L
Sbjct: 147 KIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 249 YLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
LPFDD ++ VL++ I G + LPK+LSPGA L++++L NP+ RI+I I D+WF+
Sbjct: 204 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 263
Query: 309 D 309
D
Sbjct: 264 D 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 180/298 (60%), Gaps = 39/298 (13%)
Query: 12 RLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+G Y++ +TLGEG+FGKVK A +G A+KI+ K + + +I+REI+ L+LL
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 72 KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
+HP++++L++V+ SK +I MV+EY G ELFD I + ++ E E R+ FQQ+I V YCH
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ HRDLK EN+LLD N+KI+
Sbjct: 121 RHKIVHRDLKP-----------------------------------ENLLLDEHLNVKIA 145
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLS + D L T+CGSPNY APEV++ + Y G D+WSCGVILYV+L LP
Sbjct: 146 DFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
Query: 252 FDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
FDD ++ VL++ I G + LPK+LSPGA L++++L NP+ RI+I I D+WF+ D
Sbjct: 203 FDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 175/294 (59%), Gaps = 39/294 (13%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+G Y + TLGEG+FGKVK A + A+K + + + + +++REI+ LKLL+
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP++++L++V+ + + I MV+EY GGELFD I K R+ E EGR+ FQQ+I + YCH
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
+ HRDLK EN+LLD N+KI+D
Sbjct: 127 HKIVHRDLKP-----------------------------------ENLLLDDNLNVKIAD 151
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGLS + D L T+CGSPNY APEV+ + Y G D+WSCG++LYV+L G LPF
Sbjct: 152 FGLSNI---MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWF 306
DD + L++K+ + +P +LSPGAQ+L+R+++ +P++RITI I+ D WF
Sbjct: 209 DDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 182/315 (57%), Gaps = 44/315 (13%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+G Y L +T+G+GNF KVK A+ + +G A+KI++K ++ + ++ RE+ +K+L
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILN 69
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPN+V+L EV+ ++ +Y+++EY +GGE+FD + + GR++E E R F+Q++ V YCH
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K + HRDLK EN+LLD+ NIKI+D
Sbjct: 130 KRIVHRDLKA-----------------------------------ENLLLDADMNIKIAD 154
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FG S F G L T CGSP Y APE+ + YDG D+WS GVILY +++G LPF
Sbjct: 155 FGFS---NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
D +NL L +++ RG +++P ++S +NLL++ L NP+KR T+ I D W
Sbjct: 212 DGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWIN----- 266
Query: 313 ANPDDDEEDIFVDNE 327
A ++DE FV+ E
Sbjct: 267 AGHEEDELKPFVEPE 281
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 184/325 (56%), Gaps = 44/325 (13%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK 62
IA E +G Y L +T+G+GNF KVK A+ + +G A+KI++K ++ + ++
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLF 62
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQ 122
RE+ +K+L HPN+V+L EV+ ++ +Y+++EY +GGE+FD + + GR++E E R F+Q
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ 122
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
++ V YCH K + HRDLK EN+LL
Sbjct: 123 IVSAVQYCHQKRIVHRDLKA-----------------------------------ENLLL 147
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
D+ NIKI+DFG S F G L CG+P Y APE+ + YDG D+WS GVIL
Sbjct: 148 DADMNIKIADFGFS---NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
Y +++G LPFD +NL L +++ RG +++P ++S +NLL++ L NP+KR T+ I
Sbjct: 205 YTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
Query: 303 DEWFEQDYTPANPDDDEEDIFVDNE 327
D W A ++DE FV+ E
Sbjct: 265 DRWIN-----AGHEEDELKPFVEPE 284
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 181/322 (56%), Gaps = 44/322 (13%)
Query: 4 AEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
A E +G Y L +T+G+GNF KVK A+ + +G AVKI++K ++ + ++ R
Sbjct: 4 ATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFR 62
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
E+ +K+L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + GR++E E R F+Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ V YCH K + HRDLK EN+LLD
Sbjct: 123 VSAVQYCHQKFIVHRDLKA-----------------------------------ENLLLD 147
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ NIKI+DFG S F L T CGSP Y APE+ + YDG D+WS GVILY
Sbjct: 148 ADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
+++G LPFD +NL L +++ RG +++P ++S +NLL+K L NP KR T+ I D
Sbjct: 205 TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
Query: 304 EWFEQDYTPANPDDDEEDIFVD 325
W + +DDE +V+
Sbjct: 265 RWMNVGH-----EDDELKPYVE 281
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 173/303 (57%), Gaps = 39/303 (12%)
Query: 4 AEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
A E +G Y L +T+G+GNF KVK A+ + +G AVKI++K ++ + ++ R
Sbjct: 4 ATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFR 62
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
E+ +K+L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + GR++E E R F+Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ V YCH K + HRDLK EN+LLD
Sbjct: 123 VSAVQYCHQKFIVHRDLKA-----------------------------------ENLLLD 147
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ NIKI+DFG S F L T CGSP Y APE+ + YDG D+WS GVILY
Sbjct: 148 ADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
+++G LPFD +NL L +++ RG +++P ++S +NLL+K L NP KR T+ I D
Sbjct: 205 TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
Query: 304 EWF 306
W
Sbjct: 265 RWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 181/322 (56%), Gaps = 44/322 (13%)
Query: 4 AEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
A E +G Y L +T+G+GNF KVK A+ + +G AV+I++K ++ + ++ R
Sbjct: 4 ATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL-QKLFR 62
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
E+ +K+L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + GR++E E R F+Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ V YCH K + HRDLK EN+LLD
Sbjct: 123 VSAVQYCHQKFIVHRDLKA-----------------------------------ENLLLD 147
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ NIKI+DFG S F L T CGSP Y APE+ + YDG D+WS GVILY
Sbjct: 148 ADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
+++G LPFD +NL L +++ RG +++P ++S +NLL+K L NP KR T+ I D
Sbjct: 205 TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
Query: 304 EWFEQDYTPANPDDDEEDIFVD 325
W + +DDE +V+
Sbjct: 265 RWMNVGH-----EDDELKPYVE 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 180/322 (55%), Gaps = 44/322 (13%)
Query: 4 AEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
A E +G Y L +T+G+GNF KVK A+ + +G AVKI++K ++ + ++ R
Sbjct: 4 ATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFR 62
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
E+ +K+L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + GR++E E R F+Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ V YCH K + HRDLK EN+LLD
Sbjct: 123 VSAVQYCHQKFIVHRDLKA-----------------------------------ENLLLD 147
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ NIKI+DFG S F L CG+P Y APE+ + YDG D+WS GVILY
Sbjct: 148 ADMNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
+++G LPFD +NL L +++ RG +++P ++S +NLL+K L NP KR T+ I D
Sbjct: 205 TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
Query: 304 EWFEQDYTPANPDDDEEDIFVD 325
W + +DDE +V+
Sbjct: 265 RWMNVGH-----EDDELKPYVE 281
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 180/322 (55%), Gaps = 44/322 (13%)
Query: 4 AEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
A E +G Y L +T+G+GNF KVK A+ + +G AV+I++K ++ + ++ R
Sbjct: 4 ATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL-QKLFR 62
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
E+ +K+L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + GR++E E R F+Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ V YCH K + HRDLK EN+LLD
Sbjct: 123 VSAVQYCHQKFIVHRDLKA-----------------------------------ENLLLD 147
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ NIKI+DFG S F L CGSP Y APE+ + YDG D+WS GVILY
Sbjct: 148 ADMNIKIADFGFS---NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
+++G LPFD +NL L +++ RG +++P ++S +NLL+K L NP KR T+ I D
Sbjct: 205 TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
Query: 304 EWFEQDYTPANPDDDEEDIFVD 325
W + +DDE +V+
Sbjct: 265 RWMNVGH-----EDDELKPYVE 281
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 178/315 (56%), Gaps = 44/315 (13%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
+ +G Y L +T+G+GNF KVK A+ + +G AVKI++K ++ + ++ RE+ +K+
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKV 62
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + G ++E E R F+Q++ V YC
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYC 122
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H K + HRDLK EN+LLD+ NIKI
Sbjct: 123 HQKFIVHRDLKA-----------------------------------ENLLLDADMNIKI 147
Query: 191 SDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYL 250
+DFG S F L T CGSP Y APE+ + YDG D+WS GVILY +++G L
Sbjct: 148 ADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 251 PFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
PFD +NL L +++ RG +++P ++S +NLL+K L NP KR T+ I D W
Sbjct: 205 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN--- 261
Query: 311 TPANPDDDEEDIFVD 325
+DDE +V+
Sbjct: 262 --VGHEDDELKPYVE 274
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 180/319 (56%), Gaps = 39/319 (12%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L YEL T+G G F KVK A + +G A+KI++KN + +IK EI LK L+
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLR 66
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
H ++ +L+ VL + +KI+MVLEY GGELFD I S+ RL E E R +F+Q++ V+Y H+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
+G HRDLK EN+L D +K+ D
Sbjct: 127 QGYAHRDLKP-----------------------------------ENLLFDEYHKLKLID 151
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL A P+ +D L T CGS Y APE++ + Y G+ +D+WS G++LYV++ G+LPF
Sbjct: 152 FGLCAKPKGNKDYHL-QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYT- 311
DD N+ LY+KI RG + +PKWLSP + LL+++L+ +P KRI++ + W QDY
Sbjct: 211 DDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNY 270
Query: 312 PANPDDDEEDIFVDNEAFS 330
P I +D++ +
Sbjct: 271 PVEWQSKNPFIHLDDDCVT 289
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 168/302 (55%), Gaps = 39/302 (12%)
Query: 4 AEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
A E +G Y L +T+G+GNF KVK A+ + +G AVKI++K ++ + ++ R
Sbjct: 4 ATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFR 62
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
E+ K+L HPN+V+L EV+ ++ +Y+V EY +GGE+FD + + GR +E E R F+Q+
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ V YCH K + HRDLK EN+LLD
Sbjct: 123 VSAVQYCHQKFIVHRDLKA-----------------------------------ENLLLD 147
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ NIKI+DFG S F L CG+P Y APE+ + YDG D+WS GVILY
Sbjct: 148 ADXNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
+++G LPFD +NL L +++ RG +++P + S +NLL+K L NP KR T+ I D
Sbjct: 205 TLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILNPSKRGTLEQIXKD 264
Query: 304 EW 305
W
Sbjct: 265 RW 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 180/322 (55%), Gaps = 47/322 (14%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK 62
I E +G Y L +T+G+GNF KVK A+ + +G AVKI++K ++ + ++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLF 62
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQ 122
RE+ +K+L HPN+V+L EV+ ++ +Y+V+EY +GGE+FD + + GR++E E R F+Q
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
++ V YCH K + HRDLK EN+LL
Sbjct: 123 IVSAVQYCHQKYIVHRDLKA-----------------------------------ENLLL 147
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
D NIKI+DFG S F L T CGSP Y APE+ + YDG D+WS GVIL
Sbjct: 148 DGDMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
Y +++G LPFD +NL L +++ RG +++P ++S +NLL+K+L NP+KR ++ I
Sbjct: 205 YTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMK 264
Query: 303 DEWFE--------QDYTPANPD 316
D W + YT +PD
Sbjct: 265 DRWMNVGHEEEELKPYTEPDPD 286
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 160/304 (52%), Gaps = 58/304 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYEL + +G GNFG + +D S AVK +E+ KI + +KREI + L+HP
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHP 74
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+VR EV+ + + + +V+EY +GGELF++I + GR E E R FQQLI GVSYCH
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG--NIKISD 192
V HRDLK LEN LLD +KI D
Sbjct: 135 VCHRDLK-----------------------------------LENTLLDGSPAPRLKICD 159
Query: 193 FGLSALPQHFRDDGLLHT----TCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
FG S +LH+ T G+P Y+APEVL + YDG +D+WSCGV LYV+L G
Sbjct: 160 FGYSK-------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
Query: 249 YLPFDD----RNLAVLYQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF+D +N +I + +P + +SP ++L+ +I +P KRI+I I+
Sbjct: 213 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 272
Query: 303 DEWF 306
EWF
Sbjct: 273 HEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 159/304 (52%), Gaps = 58/304 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYEL + +G GNFG + +D S AVK +E+ KI +KREI + L+HP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIAANVKREIINHRSLRHP 75
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+VR EV+ + + + +V+EY +GGELF++I + GR E E R FQQLI GVSYCH
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG--NIKISD 192
V HRDLK LEN LLD +KI D
Sbjct: 136 VCHRDLK-----------------------------------LENTLLDGSPAPRLKICD 160
Query: 193 FGLSALPQHFRDDGLLHT----TCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
FG S +LH+ T G+P Y+APEVL + YDG +D+WSCGV LYV+L G
Sbjct: 161 FGYSK-------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 249 YLPFDD----RNLAVLYQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF+D +N +I + +P + +SP ++L+ +I +P KRI+I I+
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 303 DEWF 306
EWF
Sbjct: 274 HEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 159/304 (52%), Gaps = 58/304 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYEL + +G GNFG + +D S AVK +E+ KI + +KREI + L+HP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHP 75
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+VR EV+ + + + +V+EY +GGELF++I + GR E E R FQQLI GVSYCH
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG--NIKISD 192
V HRDLK LEN LLD +KI
Sbjct: 136 VCHRDLK-----------------------------------LENTLLDGSPAPRLKICA 160
Query: 193 FGLSALPQHFRDDGLLHT----TCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
FG S +LH+ T G+P Y+APEVL + YDG +D+WSCGV LYV+L G
Sbjct: 161 FGYSK-------SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 249 YLPFDD----RNLAVLYQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF+D +N +I + +P + +SP ++L+ +I +P KRI+I I+
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 303 DEWF 306
EWF
Sbjct: 274 HEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 159/304 (52%), Gaps = 58/304 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYEL + +G GNFG + +D S AVK +E+ KI + +KREI + L+HP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHP 75
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+VR EV+ + + + +V+EY +GGELF++I + GR E E R FQQLI GVSYCH
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG--NIKISD 192
V HRDLK LEN LLD +KI
Sbjct: 136 VCHRDLK-----------------------------------LENTLLDGSPAPRLKICA 160
Query: 193 FGLSALPQHFRDDGLLHT----TCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
FG S +LH+ T G+P Y+APEVL + YDG +D+WSCGV LYV+L G
Sbjct: 161 FGYSK-------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 249 YLPFDD----RNLAVLYQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF+D +N +I + +P + +SP ++L+ +I +P KRI+I I+
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 303 DEWF 306
EWF
Sbjct: 274 HEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 159/304 (52%), Gaps = 58/304 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYEL + +G GNFG + +D + AVK +E+ KI + +KREI + L+HP
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE----KIDENVKREIINHRSLRHP 75
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+VR EV+ + + + +V+EY +GGELF++I + GR E E R FQQLI GVSY H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--GNIKISD 192
V HRDLK LEN LLD +KI+D
Sbjct: 136 VAHRDLK-----------------------------------LENTLLDGSPAPRLKIAD 160
Query: 193 FGLSALPQHFRDDGLLH----TTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
FG S +LH + G+P Y+APEVL + YDG +D+WSCGV LYV+L G
Sbjct: 161 FGYSKA-------SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 249 YLPFDD----RNLAVLYQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF+D +N +I + +P + +SP ++L+ +I +P KRI+I I+
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 303 DEWF 306
EWF
Sbjct: 274 HEWF 277
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 58/304 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ + +G GNFG + +D + AVK +E+ I + ++REI + L+HP
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----AAIDENVQREIINHRSLRHP 76
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+VR EV+ + + + +++EY +GGEL+++I + GR E E R FQQL+ GVSYCH+
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG--NIKISD 192
+ HRDLK LEN LLD +KI D
Sbjct: 137 ICHRDLK-----------------------------------LENTLLDGSPAPRLKICD 161
Query: 193 FGLSALPQHFRDDGLLHT----TCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
FG S +LH+ T G+P Y+APEVL + YDG +D+WSCGV LYV+L G
Sbjct: 162 FGYSK-------SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
Query: 249 YLPFDD----RNLAVLYQKIFRGDFKLPK--WLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF+D R+ Q+I + +P +SP +L+ +I +P RI+I IK
Sbjct: 215 AYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274
Query: 303 DEWF 306
WF
Sbjct: 275 HSWF 278
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 160/306 (52%), Gaps = 46/306 (15%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+L LG+G F V+ + +G +A KI+ ++ + +++RE +LLKHPN
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLKHPN 64
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ ++ + Y+V + VTGGELF+ I ++ EA+ QQ+++ V++CH G+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISD 192
HRDLK EN+LL SK +K++D
Sbjct: 125 VHRDLKP-----------------------------------ENLLLASKSKGAAVKLAD 149
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ Q D G+P Y++PEVL Y G D+W+CGVILY++L GY PF
Sbjct: 150 FGLAIEVQG--DQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPF 206
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D + LYQ+I G DF P+W ++P A++L+ K+L NP KRIT + W Q
Sbjct: 207 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
Query: 309 DYTPAN 314
T A+
Sbjct: 267 RSTVAS 272
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 163/314 (51%), Gaps = 46/314 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+L LG+G F V+ + +G +A KI+ ++ + +++RE +LLKHPN
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLKHPN 64
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ ++ + Y+V + VTGGELF+ I ++ EA+ QQ+++ V++CH G+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISD 192
HRDLK EN+LL SK +K++D
Sbjct: 125 VHRDLKP-----------------------------------ENLLLASKSKGAAVKLAD 149
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ Q D G+P Y++PEVL Y G D+W+CGVILY++L GY PF
Sbjct: 150 FGLAIEVQ--GDQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDMWACGVILYILLVGYPPF 206
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D + LYQ+I G DF P+W ++P A++L+ K+L NP KRIT + W Q
Sbjct: 207 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
Query: 309 DYTPANPDDDEEDI 322
T A+ +E +
Sbjct: 267 RSTVASMMHRQETV 280
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 155/301 (51%), Gaps = 48/301 (15%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E TLG G F +V A++ +G FAVK + K + + + I+ EIA L+ +KH N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS--IENEIAVLRKIKHEN 81
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+V L ++ S + +Y+V++ V+GGELFD+I KG E + L +Q++D V Y H G+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL---DSKGNIKISD 192
HRDLK EN+L D + I ISD
Sbjct: 142 VHRDLKP-----------------------------------ENLLYYSQDEESKIMISD 166
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGLS + ++ T CG+P YVAPEVLA + Y A D WS GVI Y++L GY PF
Sbjct: 167 FGLSKMEGK---GDVMSTACGTPGYVAPEVLAQKPYSKAV-DCWSIGVIAYILLCGYPPF 222
Query: 253 DDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D N + L+++I + +++ P W +S A++ +R ++E +P KR T W
Sbjct: 223 YDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAG 282
Query: 309 D 309
D
Sbjct: 283 D 283
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 160/314 (50%), Gaps = 46/314 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+L +G+G F V+ L +G +A KI+ ++ + +++RE +LLKH N
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICRLLKHSN 64
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ ++ + Y+V + VTGGELF+ I ++ EA+ QQ+++ V +CH GV
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 124
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKISD 192
HRDLK EN+LL SK +K++D
Sbjct: 125 VHRDLKP-----------------------------------ENLLLASKCKGAAVKLAD 149
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ Q D G+P Y++PEVL Y G DIW+CGVILY++L GY PF
Sbjct: 150 FGLAIEVQ--GDQQAWFGFAGTPGYLSPEVLRKEAY-GKPVDIWACGVILYILLVGYPPF 206
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D + LYQ+I G DF P+W ++P A+NL+ ++L NP KRIT W Q
Sbjct: 207 WDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQ 266
Query: 309 DYTPANPDDDEEDI 322
T A+ +E +
Sbjct: 267 RSTVASMMHRQETV 280
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 159/304 (52%), Gaps = 48/304 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ R LG+G+FG+V +D +G AVK++ K ++ + + RE+ LK L HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+++L+E K Y+V E TGGELFD+I S+ R E + ++ +Q++ G++Y H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKIS 191
+ HRDLK P EN+LL+SK NI+I
Sbjct: 147 IVHRDLK---------------------------P--------ENLLLESKSKDANIRII 171
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLS HF + G+ Y+APEVL G D+WS GVILY++L+G P
Sbjct: 172 DFGLST---HFEASKKMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILLSGCPP 226
Query: 252 FDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F+ N + +K+ +G F+LP+W +S A++L+RK+L P RI+ EW
Sbjct: 227 FNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI- 285
Query: 308 QDYT 311
Q YT
Sbjct: 286 QTYT 289
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 160/304 (52%), Gaps = 48/304 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ R LG+G+FG+V +D +G AVK++ K ++ + + RE+ LK L HP
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+++L+E K Y+V E TGGELFD+I S+ R E + ++ +Q++ G++Y H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKIS 191
+ HRDLK P EN+LL+SK NI+I
Sbjct: 171 IVHRDLK---------------------------P--------ENLLLESKSKDANIRII 195
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLS HF + G+ Y+APEVL YD D+WS GVILY++L+G P
Sbjct: 196 DFGLST---HFEASKKMKDKIGTAYYIAPEVLHGT-YD-EKCDVWSTGVILYILLSGCPP 250
Query: 252 FDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F+ N + +K+ +G F+LP+W +S A++L+RK+L P RI+ EW
Sbjct: 251 FNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI- 309
Query: 308 QDYT 311
Q YT
Sbjct: 310 QTYT 313
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 160/304 (52%), Gaps = 48/304 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ R LG+G+FG+V +D +G AVK++ K ++ + + RE+ LK L HP
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+++L+E K Y+V E TGGELFD+I S+ R E + ++ +Q++ G++Y H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKIS 191
+ HRDLK P EN+LL+SK NI+I
Sbjct: 170 IVHRDLK---------------------------P--------ENLLLESKSKDANIRII 194
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLS HF + G+ Y+APEVL YD D+WS GVILY++L+G P
Sbjct: 195 DFGLST---HFEASKKMKDKIGTAYYIAPEVLHGT-YD-EKCDVWSTGVILYILLSGCPP 249
Query: 252 FDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F+ N + +K+ +G F+LP+W +S A++L+RK+L P RI+ EW
Sbjct: 250 FNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI- 308
Query: 308 QDYT 311
Q YT
Sbjct: 309 QTYT 312
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 48/304 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ R LG+G+FG+V +D +G AVK++ K ++ + + RE+ LK L HP
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+++L+E K Y+V E TGGELFD+I S+ R E + ++ +Q++ G++Y H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKIS 191
+ HRDLK EN+LL+SK NI+I
Sbjct: 153 IVHRDLKP-----------------------------------ENLLLESKSKDANIRII 177
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLS HF + G+ Y+APEVL G D+WS GVILY++L+G P
Sbjct: 178 DFGLST---HFEASKKMKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILLSGCPP 232
Query: 252 FDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F+ N + +K+ +G F+LP+W +S A++L+RK+L P RI+ EW
Sbjct: 233 FNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI- 291
Query: 308 QDYT 311
Q YT
Sbjct: 292 QTYT 295
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 161/314 (51%), Gaps = 46/314 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+L LG+G F V+ + +G +A KI+ ++ + +++RE +LLKHPN
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARICRLLKHPN 82
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ ++ + Y++ + VTGGELF+ I ++ EA+ QQ+++ V +CH GV
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKISD 192
HRDLK EN+LL SK +K++D
Sbjct: 143 VHRDLKP-----------------------------------ENLLLASKLKGAAVKLAD 167
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ + + G+P Y++PEVL Y G D+W+CGVILY++L GY PF
Sbjct: 168 FGLAIEVE--GEQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPF 224
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D + LYQ+I G DF P+W ++P A++L+ K+L NP KRIT A W
Sbjct: 225 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 284
Query: 309 DYTPANPDDDEEDI 322
T A+ +E +
Sbjct: 285 RSTVASCMHRQETV 298
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 50/302 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+ LG G F +V A+D + A+K + K + + + ++ EIA L +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPN 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+V L ++ S +Y++++ V+GGELFD+I KG E + +L Q++D V Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL---LDSKGNIKISD 192
HRDLK EN+L LD I ISD
Sbjct: 138 VHRDLKP-----------------------------------ENLLYYSLDEDSKIMISD 162
Query: 193 FGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
FGLS + D G +L T CG+P YVAPEVLA + Y A D WS GVI Y++L GY P
Sbjct: 163 FGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAV-DCWSIGVIAYILLCGYPP 217
Query: 252 FDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F D N A L+++I + +++ P W +S A++ +R ++E +P KR T W
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
Query: 308 QD 309
D
Sbjct: 278 GD 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 50/302 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+ LG G F +V A+D + A+K + K + + + ++ EIA L +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPN 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+V L ++ S +Y++++ V+GGELFD+I KG E + +L Q++D V Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL---LDSKGNIKISD 192
HRDLK EN+L LD I ISD
Sbjct: 138 VHRDLKP-----------------------------------ENLLYYSLDEDSKIMISD 162
Query: 193 FGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
FGLS + D G +L T CG+P YVAPEVLA + Y A D WS GVI Y++L GY P
Sbjct: 163 FGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAV-DCWSIGVIAYILLCGYPP 217
Query: 252 FDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F D N A L+++I + +++ P W +S A++ +R ++E +P KR T W
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
Query: 308 QD 309
D
Sbjct: 278 GD 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 50/302 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+ LG G F +V A+D + A+K + K + + + ++ EIA L +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPN 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+V L ++ S +Y++++ V+GGELFD+I KG E + +L Q++D V Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL---LDSKGNIKISD 192
HRDLK EN+L LD I ISD
Sbjct: 138 VHRDLKP-----------------------------------ENLLYYSLDEDSKIMISD 162
Query: 193 FGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
FGLS + D G +L T CG+P YVAPEVLA + Y A D WS GVI Y++L GY P
Sbjct: 163 FGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAV-DCWSIGVIAYILLCGYPP 217
Query: 252 FDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F D N A L+++I + +++ P W +S A++ +R ++E +P KR T W
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
Query: 308 QD 309
D
Sbjct: 278 GD 279
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 50/302 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+ LG G F +V A+D + A+K + K + + + ++ EIA L +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS--MENEIAVLHKIKHPN 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+V L ++ S +Y++++ V+GGELFD+I KG E + +L Q++D V Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL---LDSKGNIKISD 192
HRDLK EN+L LD I ISD
Sbjct: 138 VHRDLKP-----------------------------------ENLLYYSLDEDSKIMISD 162
Query: 193 FGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
FGLS + D G +L T CG+P YVAPEVLA + Y A D WS GVI Y++L GY P
Sbjct: 163 FGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAV-DCWSIGVIAYILLCGYPP 217
Query: 252 FDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F D N A L+++I + +++ P W +S A++ +R ++E +P KR T W
Sbjct: 218 FYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
Query: 308 QD 309
D
Sbjct: 278 GD 279
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 48/304 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ R LG+G+FG+V +D +G AVK++ K ++ + + RE+ LK L HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+ +L+E K Y+V E TGGELFD+I S+ R E + ++ +Q++ G++Y H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKIS 191
+ HRDLK P EN+LL+SK NI+I
Sbjct: 147 IVHRDLK---------------------------P--------ENLLLESKSKDANIRII 171
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLS HF G+ Y+APEVL G D+WS GVILY++L+G P
Sbjct: 172 DFGLST---HFEASKKXKDKIGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILLSGCPP 226
Query: 252 FDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F+ N + +K+ +G F+LP+W +S A++L+RK L P RI+ EW
Sbjct: 227 FNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI- 285
Query: 308 QDYT 311
Q YT
Sbjct: 286 QTYT 289
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 64
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 125 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 149
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 150 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 209
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 210 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 265
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 46/314 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+L LG+G F V+ + +G +A I+ ++ + +++RE +LLKHPN
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPN 71
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ ++ + Y++ + VTGGELF+ I ++ EA+ QQ+++ V +CH GV
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKISD 192
HR+LK EN+LL SK +K++D
Sbjct: 132 VHRNLKP-----------------------------------ENLLLASKLKGAAVKLAD 156
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ + + G+P Y++PEVL Y G D+W+CGVILY++L GY PF
Sbjct: 157 FGLAIEVE--GEQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPF 213
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D + LYQ+I G DF P+W ++P A++L+ K+L NP KRIT A W
Sbjct: 214 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273
Query: 309 DYTPANPDDDEEDI 322
T A+ +E +
Sbjct: 274 RSTVASCMHRQETV 287
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 47/288 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y++ LG+G F V+ +GL FA KI+ ++ + +++RE + L+HPN
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ + +S Y+V + VTGGELF+ I ++ EA+ QQ+++ ++YCH+ G+
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISD 192
HR+LK EN+LL SK +K++D
Sbjct: 126 VHRNLKP-----------------------------------ENLLLASKAKGAAVKLAD 150
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ D H G+P Y++PEVL Y DIW+CGVILY++L GY PF
Sbjct: 151 FGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV-DIWACGVILYILLVGYPPF 206
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRIT 296
D + LY +I G D+ P+W ++P A++L+ +L NP KRIT
Sbjct: 207 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 47/288 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y++ LG+G F V+ +GL FA KI+ ++ + +++RE + L+HPN
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPN 89
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ + +S Y+V + VTGGELF+ I ++ EA+ QQ+++ ++YCH+ G+
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISD 192
HR+LK EN+LL SK +K++D
Sbjct: 150 VHRNLKP-----------------------------------ENLLLASKAKGAAVKLAD 174
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ D H G+P Y++PEVL Y DIW+CGVILY++L GY PF
Sbjct: 175 FGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV-DIWACGVILYILLVGYPPF 230
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRIT 296
D + LY +I G D+ P+W ++P A++L+ +L NP KRIT
Sbjct: 231 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 47/288 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y++ LG+G F V+ +GL FA KI+ ++ + +++RE + L+HPN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ + +S Y+V + VTGGELF+ I ++ EA+ QQ+++ ++YCH+ G+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISD 192
HR+LK EN+LL SK +K++D
Sbjct: 127 VHRNLKP-----------------------------------ENLLLASKAKGAAVKLAD 151
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ D H G+P Y++PEVL Y DIW+CGVILY++L GY PF
Sbjct: 152 FGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV-DIWACGVILYILLVGYPPF 207
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRIT 296
D + LY +I G D+ P+W ++P A++L+ +L NP KRIT
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 255
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 47/288 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y++ LG+G F V+ +GL FA KI+ ++ + +++RE + L+HPN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ + +S Y+V + VTGGELF+ I ++ EA+ QQ+++ ++YCH+ G+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISD 192
HR+LK EN+LL SK +K++D
Sbjct: 127 VHRNLKP-----------------------------------ENLLLASKAKGAAVKLAD 151
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ D H G+P Y++PEVL Y DIW+CGVILY++L GY PF
Sbjct: 152 FGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV-DIWACGVILYILLVGYPPF 207
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRIT 296
D + LY +I G D+ P+W ++P A++L+ +L NP KRIT
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 255
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 40/304 (13%)
Query: 2 VIAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQI 61
+AE + + +++GR LG+G FG V A++ + A+K+L K+++ + Q+
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 62 KREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ 121
+REI L+HPN++R++ + +IY++LE+ GEL+ ++ GR E +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
+L D + YCH + V HRD+K EN+L
Sbjct: 122 ELADALHYCHERKVIHRDIKP-----------------------------------ENLL 146
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+ KG +KI+DFG S R + CG+ +Y+ PE++ + +D D+W GV+
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHDEKV-DLWCAGVL 201
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIK 301
Y L G PFD + +++I D K P +LS G+++L+ K+L +P +R+ + G+
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Query: 302 ADEW 305
W
Sbjct: 262 EHPW 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 40/304 (13%)
Query: 2 VIAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQI 61
+AE + + +++GR LG+G FG V A++ + A+K+L K+++ + Q+
Sbjct: 3 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 62
Query: 62 KREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ 121
+REI L+HPN++R++ + +IY++LE+ GEL+ ++ GR E +
Sbjct: 63 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 122
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
+L D + YCH + V HRD+K EN+L
Sbjct: 123 ELADALHYCHERKVIHRDIKP-----------------------------------ENLL 147
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+ KG +KI+DFG S R + CG+ +Y+ PE++ + +D D+W GV+
Sbjct: 148 MGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHDEKV-DLWCAGVL 202
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIK 301
Y L G PFD + +++I D K P +LS G+++L+ K+L +P +R+ + G+
Sbjct: 203 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 262
Query: 302 ADEW 305
W
Sbjct: 263 EHPW 266
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 160/314 (50%), Gaps = 49/314 (15%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
+G RY + LG+G+FG+V +D + +AVK++ K + K T I RE+ L
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELL 75
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
K L HPN+++L E+L S Y+V E TGGELFD+I + R E + ++ +Q+ G++
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--- 185
Y H + HRDLK P ENILL+SK
Sbjct: 136 YMHKHNIVHRDLK---------------------------P--------ENILLESKEKD 160
Query: 186 GNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+IKI DFGLS F+ + + G+ Y+APEVL RG D+WS GVILY++
Sbjct: 161 CDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYIL 215
Query: 246 LTGYLPFDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIK 301
L+G PF +N + +++ G F LP+W +S A++L+RK+L +P RIT
Sbjct: 216 LSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
Query: 302 ADEWFEQDYTPANP 315
W Q Y+ P
Sbjct: 276 EHPWI-QKYSSETP 288
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI +L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINAMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ CG+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY GE++ ++ + E +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 124 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 149 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 203
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 204 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 263
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 264 WITANSSKPSNCQNKE 279
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 149/294 (50%), Gaps = 40/294 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+++GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ R E +L + +SYCH+K V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 134 IHRDIKP-----------------------------------ENLLLGSNGELKIADFGW 158
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R D T CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 159 SVHAPSSRRD----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGMPPFEAH 213
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
Y++I R +F P +++ GA++L+ ++L+ N +R+T+A + W + +
Sbjct: 214 TYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ G+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 46/298 (15%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y L T+G G++G+VK A + + A K + K ++ D+ K+EI +K L HPN
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK---YFVEDVDRFKQEIEIMKSLDHPN 84
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+E + IY+V+E TGGELF+++ K +E++ ++ + ++ V+YCH V
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-IKISDFG 194
HRDLK + FL L DS + +K+ DFG
Sbjct: 145 AHRDLKP------------ENFLF---------------------LTDSPDSPLKLIDFG 171
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+A F+ ++ T G+P YV+P+VL G G D WS GV++YV+L GY PF
Sbjct: 172 LAA---RFKPGKMMRTKVGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSA 226
Query: 255 RNLAVLYQKIFRGDFKLPK--WL--SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ KI G F P+ WL SP A++L+R++L +P +RIT EWFE+
Sbjct: 227 PTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 43/317 (13%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 145 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 169
Query: 185 KGNIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
G +KI+DFG S P RDD CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 170 AGELKIADFGWSVHAPSSRRDD-----LCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCY 223
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 224 EFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 283
Query: 304 EWFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 284 PWITANSSKPSNCQNKE 300
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ G+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 46/298 (15%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y L T+G G++G+VK A + + A K + K ++ D+ K+EI +K L HPN
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK---YFVEDVDRFKQEIEIMKSLDHPN 67
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+E + IY+V+E TGGELF+++ K +E++ ++ + ++ V+YCH V
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-IKISDFG 194
HRDLK + FL L DS + +K+ DFG
Sbjct: 128 AHRDLKP------------ENFLF---------------------LTDSPDSPLKLIDFG 154
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+A F+ ++ T G+P YV+P+VL G G D WS GV++YV+L GY PF
Sbjct: 155 LAA---RFKPGKMMRTKVGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSA 209
Query: 255 RNLAVLYQKIFRGDFKLPK--WL--SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ KI G F P+ WL SP A++L+R++L +P +RIT EWFE+
Sbjct: 210 PTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHEN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 127 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ G+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 152 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ G+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 40/296 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++L +TLGEG +G+V+ A + + AVKI++ R + + IK+EI K+L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHEN 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
VV+ + + Y+ LEY +GGELFD+I + E + ++ F QL+ GV Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LLD + N+KISDFGL
Sbjct: 126 THRDIKP-----------------------------------ENLLLDERDNLKISDFGL 150
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ + LL+ G+ YVAPE+L R + D+WSCG++L +L G LP+D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 256 NLAVL-YQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
+ + Y L W + LL KIL NP RITI IK D W+ +
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 40/304 (13%)
Query: 2 VIAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQI 61
+AE + + +++ R LG+G FG V A++ + A+K+L K+++ + Q+
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 62 KREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ 121
+REI L+HPN++R++ + +IY++LE+ GEL+ ++ GR E +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
+L D + YCH + V HRD+K EN+L
Sbjct: 122 ELADALHYCHERKVIHRDIKP-----------------------------------ENLL 146
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+ KG +KI+DFG S R + CG+ +Y+ PE++ + +D D+W GV+
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHDEKV-DLWCAGVL 201
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIK 301
Y L G PFD + +++I D K P +LS G+++L+ K+L +P +R+ + G+
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Query: 302 ADEW 305
W
Sbjct: 262 EHPW 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 157/307 (51%), Gaps = 48/307 (15%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
+G RY + LG+G+FG+V +D + +AVK++ K + K T I RE+ L
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELL 75
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
K L HPN+++L E+L S Y+V E TGGELFD+I + R E + ++ +Q+ G++
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--- 185
Y H + HRDLK ENILL+SK
Sbjct: 136 YMHKHNIVHRDLKP-----------------------------------ENILLESKEKD 160
Query: 186 GNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+IKI DFGLS F+ + + G+ Y+APEVL RG D+WS GVILY++
Sbjct: 161 CDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYIL 215
Query: 246 LTGYLPFDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIK 301
L+G PF +N + +++ G F LP+W +S A++L+RK+L +P RIT
Sbjct: 216 LSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
Query: 302 ADEWFEQ 308
W ++
Sbjct: 276 EHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 157/307 (51%), Gaps = 48/307 (15%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
+G RY + LG+G+FG+V +D + +AVK++ K + K T I RE+ L
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELL 75
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
K L HPN+++L E+L S Y+V E TGGELFD+I + R E + ++ +Q+ G++
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--- 185
Y H + HRDLK ENILL+SK
Sbjct: 136 YMHKHNIVHRDLKP-----------------------------------ENILLESKEKD 160
Query: 186 GNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+IKI DFGLS F+ + + G+ Y+APEVL RG D+WS GVILY++
Sbjct: 161 CDIKIIDFGLSTC---FQQNTKMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYIL 215
Query: 246 LTGYLPFDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIK 301
L+G PF +N + +++ G F LP+W +S A++L+RK+L +P RIT
Sbjct: 216 LSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
Query: 302 ADEWFEQ 308
W ++
Sbjct: 276 EHPWIQK 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 41/314 (13%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 67 TLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
L+HPN++RL+ +++Y++LEY G ++ ++ + E +L +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SYCH+K V HRD+K EN+LL S G
Sbjct: 122 LSYCHSKRVIHRDIKP-----------------------------------ENLLLGSAG 146
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI+DFG S R D T CG+ +Y+ PE++ R +D D+WS GV+ Y L
Sbjct: 147 ELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFL 201
Query: 247 TGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWF 306
G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 202 VGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
Query: 307 EQDYT-PANPDDDE 319
+ + P+N + E
Sbjct: 262 TANSSKPSNCQNKE 275
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 40/294 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+++GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ R E +L + +SYCH+K V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 134 IHRDIKP-----------------------------------ENLLLGSNGELKIADFGW 158
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R T CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 159 SVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGMPPFEAH 213
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
Y++I R +F P +++ GA++L+ ++L+ N +R+T+A + W + +
Sbjct: 214 TYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 124 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 149 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 203
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 204 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 263
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 264 WITANSSKPSNCQNKE 279
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 122 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 147 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 201
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 202 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 261
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 262 WITANSSKPSNCQNKE 277
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 50/293 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G F +V + +G FA+K ++K+ ++ EIA LK +KH N+V L +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTLED 73
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+ S + Y+V++ V+GGELFD+I +G E + + QQ++ V Y H G+ HRDLK
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL---DSKGNIKISDFGLSAL 198
EN+L + I I+DFGLS +
Sbjct: 134 P-----------------------------------ENLLYLTPEENSKIMITDFGLSKM 158
Query: 199 PQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLA 258
Q +G++ T CG+P YVAPEVLA + Y A D WS GVI Y++L GY PF + +
Sbjct: 159 EQ----NGIMSTACGTPGYVAPEVLAQKPYSKAV-DCWSIGVITYILLCGYPPFYEETES 213
Query: 259 VLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
L++KI G +F+ P W +S A++ + +LE +P +R T + W +
Sbjct: 214 KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 16 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 135
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 136 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 160
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 161 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 215
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 216 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 275
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 276 WITANSSKPSNCQNKE 291
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 145 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 169
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 170 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 224
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 225 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 284
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 285 WITANSSKPSNCQNKE 300
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 144/300 (48%), Gaps = 38/300 (12%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ RY GR LG+G F K D+D+ FA K++ K+ ++ +++ EIA K L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
+P+VV H +Y+VLE L + + + E E R +Q I GV Y HN
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
V HRDLK L N+ L+ ++KI D
Sbjct: 161 NRVIHRDLK-----------------------------------LGNLFLNDDMDVKIGD 185
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ + D T CG+PNY+APEVL +G+ DIWS G ILY +L G PF
Sbjct: 186 FGLATKIEF--DGERKKTLCGTPNYIAPEVLCKKGHSFEV-DIWSLGCILYTLLVGKPPF 242
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
+ L Y +I + ++ +P+ ++P A L+R++L +P R ++A + DE+F Y P
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 46/314 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y+L LG+G F V+ +A KI+ ++ + +++RE +LLKHPN
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICRLLKHPN 91
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+VRLH+ ++ + Y+V + VTGGELF+ I ++ EA+ Q+++ V++ H +
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKISD 192
HRDLK EN+LL SK +K++D
Sbjct: 152 VHRDLKP-----------------------------------ENLLLASKCKGAAVKLAD 176
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ Q + G+P Y++PEVL Y G DIW+CGVILY++L GY PF
Sbjct: 177 FGLAIEVQ--GEQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDIWACGVILYILLVGYPPF 233
Query: 253 DDRNLAVLYQKIFRG--DFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
D + LYQ+I G DF P+W ++P A+NL+ ++L NP KRIT W Q
Sbjct: 234 WDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQ 293
Query: 309 DYTPANPDDDEEDI 322
T A+ +E +
Sbjct: 294 RSTVASMMHRQETV 307
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 47/289 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ + LG G +G+V +D +G A+KI++K+ + + + E+A LK L HP
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+++L+E K Y+V+E GGELFD+I + + E + + +Q++ G +Y H
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKIS 191
+ HRDLK P EN+LL+SK IKI
Sbjct: 125 IVHRDLK---------------------------P--------ENLLLESKSRDALIKIV 149
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLSA HF G + G+ Y+APEVL + YD D+WSCGVILY++L GY P
Sbjct: 150 DFGLSA---HFEVGGKMKERLGTAYYIAPEVLRKK-YD-EKCDVWSCGVILYILLCGYPP 204
Query: 252 FDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRIT 296
F + + +++ +G F P W +S A+ L++ +L P KRI+
Sbjct: 205 FGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRIS 253
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 121 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 145
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R L CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 146 AGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 200
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 201 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 260
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 261 WITANSSKPSNCQNKE 276
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 124 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE + R +D D+WS GV+ Y
Sbjct: 149 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEXIEGRXHDEKV-DLWSLGVLCYE 203
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 204 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHP 263
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 264 WITANSSKPSNCQNKE 279
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 148/289 (51%), Gaps = 47/289 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY+ + LG G +G+V +D +G A+KI++K+ + + + E+A LK L HP
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
N+++L+E K Y+V+E GGELFD+I + + E + + +Q++ G +Y H
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 141
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKIS 191
+ HRDLK EN+LL+SK IKI
Sbjct: 142 IVHRDLKP-----------------------------------ENLLLESKSRDALIKIV 166
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGLSA HF G + G+ Y+APEVL + YD D+WSCGVILY++L GY P
Sbjct: 167 DFGLSA---HFEVGGKMKERLGTAYYIAPEVLRKK-YD-EKCDVWSCGVILYILLCGYPP 221
Query: 252 FDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRIT 296
F + + +++ +G F P W +S A+ L++ +L P KRI+
Sbjct: 222 FGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRIS 270
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 121 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 145
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI++FG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 146 AGELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 200
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 201 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 260
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 261 WITANSSKPSNCQNKE 276
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 155/315 (49%), Gaps = 43/315 (13%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 67 TLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
L+HPN++RL+ +++Y++LEY G ++ ++ + E +L +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SYCH+K V HRD+K EN+LL S G
Sbjct: 122 LSYCHSKRVIHRDIKP-----------------------------------ENLLLGSAG 146
Query: 187 NIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFG S P R D CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 147 ELKIADFGWSVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEF 200
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 201 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
Query: 306 FEQDYT-PANPDDDE 319
+ + P+N + E
Sbjct: 261 ITANSSKPSNCQNKE 275
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 41/305 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 133 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 157
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R L CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 158 SVHAPSSRRAAL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 212
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYT-PAN 314
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W + + P+N
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
Query: 315 PDDDE 319
+ E
Sbjct: 273 CQNKE 277
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 155/315 (49%), Gaps = 43/315 (13%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 67 TLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
L+HPN++RL+ +++Y++LEY G ++ ++ + E +L +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SYCH+K V HRD+K EN+LL S G
Sbjct: 126 LSYCHSKRVIHRDIKP-----------------------------------ENLLLGSAG 150
Query: 187 NIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFG S P R D CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 151 ELKIADFGWSVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEF 204
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 205 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
Query: 306 FEQDYT-PANPDDDE 319
+ + P+N + E
Sbjct: 265 ITANSSKPSNCQNKE 279
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 42/291 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 133 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 157
Query: 196 SA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
S P RDD CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 158 SVHAPSSRRDD-----LCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEA 211
Query: 255 RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 212 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 152/306 (49%), Gaps = 43/306 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
S P R D CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEA 208
Query: 255 RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYT-PA 313
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W + + P+
Sbjct: 209 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
Query: 314 NPDDDE 319
N + E
Sbjct: 269 NCQNKE 274
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 41/316 (12%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY GE++ ++ + E +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 124 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R L G+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 149 AGELKIADFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 203
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 204 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 263
Query: 305 WFEQDYT-PANPDDDE 319
W + + P+N + E
Sbjct: 264 WITANSSKPSNCQNKE 279
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 155/315 (49%), Gaps = 43/315 (13%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 67 TLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
L+HPN++RL+ +++Y++LEY G ++ ++ + E +L +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SYCH+K V HRD+K EN+LL S G
Sbjct: 121 LSYCHSKRVIHRDIKP-----------------------------------ENLLLGSAG 145
Query: 187 NIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFG S P R D CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 146 ELKIADFGWSVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEF 199
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
Query: 306 FEQDYT-PANPDDDE 319
+ + P+N + E
Sbjct: 260 ITANSSKPSNCQNKE 274
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 40/301 (13%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 122 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 147 AGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 201
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 202 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 261
Query: 305 W 305
W
Sbjct: 262 W 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 41/305 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R T CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 209
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYT-PAN 314
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W + + P+N
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
Query: 315 PDDDE 319
+ E
Sbjct: 270 CQNKE 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 21 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 80
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 140
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 141 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 165
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G T CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 166 IQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 219
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 220 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 279
Query: 303 DEWF 306
+WF
Sbjct: 280 HKWF 283
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G T CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 143/300 (47%), Gaps = 38/300 (12%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ RY GR LG+G F K D+D+ FA K++ K+ ++ +++ EIA K L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
+P+VV H +Y+VLE L + + + E E R +Q I GV Y HN
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
V HRDLK L N+ L+ ++KI D
Sbjct: 161 NRVIHRDLK-----------------------------------LGNLFLNDDMDVKIGD 185
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ + D CG+PNY+APEVL +G+ DIWS G ILY +L G PF
Sbjct: 186 FGLATKIEF--DGERKKXLCGTPNYIAPEVLCKKGHSFEV-DIWSLGCILYTLLVGKPPF 242
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
+ L Y +I + ++ +P+ ++P A L+R++L +P R ++A + DE+F Y P
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 143/300 (47%), Gaps = 38/300 (12%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ RY GR LG+G F K D+D+ FA K++ K+ ++ +++ EIA K L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
+P+VV H +Y+VLE L + + + E E R +Q I GV Y HN
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
V HRDLK L N+ L+ ++KI D
Sbjct: 161 NRVIHRDLK-----------------------------------LGNLFLNDDMDVKIGD 185
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ + D CG+PNY+APEVL +G+ DIWS G ILY +L G PF
Sbjct: 186 FGLATKIEF--DGERKKDLCGTPNYIAPEVLCKKGHSFEV-DIWSLGCILYTLLVGKPPF 242
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
+ L Y +I + ++ +P+ ++P A L+R++L +P R ++A + DE+F Y P
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 41/305 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R L CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRTEL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 209
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYT-PAN 314
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W + + P+N
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
Query: 315 PDDDE 319
+ E
Sbjct: 270 CQNKE 274
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 40/301 (13%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 122 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI+DFG S R L CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 147 AGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 201
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 202 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 261
Query: 305 W 305
W
Sbjct: 262 W 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 153/311 (49%), Gaps = 41/311 (13%)
Query: 5 EKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
E K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ L+HPN++RL+ +++Y++LEY G ++ ++ + E +L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ +SYCH+K V HRD+K EN+LL S
Sbjct: 122 NALSYCHSKRVIHRDIKP-----------------------------------ENLLLGS 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G +KI++FG S R T CG+ +Y+ PE++ R +D D+WS GV+ Y
Sbjct: 147 AGELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYE 201
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
L G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + +
Sbjct: 202 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 261
Query: 305 WFEQDYT-PAN 314
W + + P+N
Sbjct: 262 WITANSSKPSN 272
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 143/300 (47%), Gaps = 38/300 (12%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ RY GR LG+G F K D+D+ FA K++ K+ ++ +++ EIA K L
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
+P+VV H +Y+VLE L + + + E E R +Q I GV Y HN
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
V HRDLK L N+ L+ ++KI D
Sbjct: 145 NRVIHRDLK-----------------------------------LGNLFLNDDMDVKIGD 169
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ + D CG+PNY+APEVL +G+ DIWS G ILY +L G PF
Sbjct: 170 FGLATKIEF--DGERKKDLCGTPNYIAPEVLCKKGHSFEV-DIWSLGCILYTLLVGKPPF 226
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
+ L Y +I + ++ +P+ ++P A L+R++L +P R ++A + DE+F Y P
Sbjct: 227 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ +S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R L CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRAAL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 209
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 210 TYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 155/312 (49%), Gaps = 45/312 (14%)
Query: 10 GMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
G ++ +++G LG+G+F V A+ + +GL A+K+++K + + +++ E+
Sbjct: 7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVS 128
LKHP+++ L+ + +Y+VLE GE+ + ++ + E E R Q+I G+
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
Y H+ G+ HRDL L N+LL NI
Sbjct: 127 YLHSHGILHRDL-----------------------------------TLSNLLLTRNMNI 151
Query: 189 KISDFGLSA---LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
KI+DFGL+ +P +T CG+PNY++PE+ A R G SD+WS G + Y +
Sbjct: 152 KIADFGLATQLKMPHEKH-----YTLCGTPNYISPEI-ATRSAHGLESDVWSLGCMFYTL 205
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
L G PFD + K+ D+++P +LS A++L+ ++L NP R++++ + +
Sbjct: 206 LIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265
Query: 306 FEQDYTPANPDD 317
++ + + D+
Sbjct: 266 MSRNSSTKSKDE 277
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 176 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 200
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G T CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 201 IQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 254
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 314
Query: 303 DEWF 306
+WF
Sbjct: 315 HKWF 318
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R L CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRAAL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 209
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 129 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 153
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R T CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 154 SVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 208
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 209 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 134 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 158
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R T CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 159 SVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 213
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 214 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +T+G G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFGL+ R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G FA+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G FA+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G FA+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R L CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRTXL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 209
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K++I + Q++REI L HPN
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ + +IY++LEY GEL+ ++ E + ++L D + YCH K V
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL KG +KI+DFG
Sbjct: 145 IHRDIKP-----------------------------------ENLLLGLKGELKIADFGW 169
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R T CG+ +Y+ PE++ R ++ D+W GV+ Y +L G PF+
Sbjct: 170 SVHAPSLRRK----TMCGTLDYLPPEMIEGRMHNEKV-DLWCIGVLCYELLVGNPPFESA 224
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
+ Y++I + D K P + GAQ+L+ K+L NP +R+ +A + A W
Sbjct: 225 SHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 130 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R L CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 155 SVHAPSSRRXXL----CGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 209
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 41/314 (13%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ L +E+GR LG+G FG V A++ S A+K+L K ++ + Q++RE+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 67 TLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
L+HPN++RL+ +++Y++LEY G ++ ++ + E +L +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SYCH+K V HRD+K EN+LL S G
Sbjct: 122 LSYCHSKRVIHRDIKP-----------------------------------ENLLLGSAG 146
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI+DFG S R T G+ +Y+ PE++ R +D D+WS GV+ Y L
Sbjct: 147 ELKIADFGWSCHAPSSRRT----TLSGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFL 201
Query: 247 TGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWF 306
G PF+ Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 202 VGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
Query: 307 EQDYT-PANPDDDE 319
+ + P+N + E
Sbjct: 262 TANSSKPSNSQNKE 275
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYQMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFGL+ R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 81
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 141
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 142 EYLHSLDLIYRDLKP-----------------------------------ENLLIDEQGY 166
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 167 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 220
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 221 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 280
Query: 303 DEWF 306
+WF
Sbjct: 281 HKWF 284
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 40/290 (13%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+GR LG+G FG V A++ A+K+L K ++ + Q++RE+ L+HPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++RL+ +++Y++LEY G ++ ++ + E +L + +SYCH+K V
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K EN+LL S G +KI+DFG
Sbjct: 127 IHRDIKP-----------------------------------ENLLLGSAGELKIADFGW 151
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
S R T CG+ +Y+ PE++ R +D D+WS GV+ Y L G PF+
Sbjct: 152 SVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEAN 206
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
Y++I R +F P +++ GA++L+ ++L+ NP +R + + W
Sbjct: 207 TYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 89
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 149
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 150 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 174
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 175 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 228
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 229 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 288
Query: 303 DEWF 306
+WF
Sbjct: 289 HKWF 292
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 147
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 148 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 172
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 173 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 226
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 227 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 286
Query: 303 DEWF 306
+WF
Sbjct: 287 HKWF 290
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 175
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 176 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 200
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 201 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 254
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 314
Query: 303 DEWF 306
+WF
Sbjct: 315 HKWF 318
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 147
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 148 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 172
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 173 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 226
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 227 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 286
Query: 303 DEWF 306
+WF
Sbjct: 287 HKWF 290
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLIIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 56 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 176 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 200
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 201 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 254
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 314
Query: 303 DEWF 306
+WF
Sbjct: 315 HKWF 318
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 59/303 (19%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK-HPNVVR 78
+ LGEG+F + S FAVKI+ K ++ ++EI LKL + HPN+V+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVK 70
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
LHEV + ++V+E + GGELF++I K E E + ++L+ VS+ H+ GV HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISDFGL 195
DLK EN+L + + IKI DFG
Sbjct: 131 DLKP-----------------------------------ENLLFTDENDNLEIKIIDFGF 155
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFD-- 253
+ L D+ L T C + +Y APE+L GYD + D+WS GVILY +L+G +PF
Sbjct: 156 ARLKP--PDNQPLKTPCFTLHYAAPELLNQNGYD-ESCDLWSLGVILYTMLSGQVPFQSH 212
Query: 254 DRNLAV-----LYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
DR+L + +KI +GDF K +S A++L++ +L +P KR+ ++G++ +E
Sbjct: 213 DRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNE 272
Query: 305 WFE 307
W +
Sbjct: 273 WLQ 275
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P + +L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +T+G G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY+ GG++F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P + +L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E RTLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
+ + P +V+L S +YMVLEY GGE+F + GR E R Q++
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +T+G G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY+ GG++F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 162/322 (50%), Gaps = 50/322 (15%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITD-QIKREIATLKLL 71
+G+Y +G LGEG++GKVK D ++ AVKIL+K ++ + + +K+EI L+ L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 72 KHPNVVRLHEVLAS--KSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGV 127
+H NV++L +VL + K K+YMV+EY G E+ D + K R + F QLIDG+
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGL 122
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H++G+ H+D+K N+LL + G
Sbjct: 123 EYLHSQGIVHKDIKP-----------------------------------GNLLLTTGGT 147
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLAN--RGYDGATSDIWSCGVILYVI 245
+KIS G++ F D T+ GSP + PE+ AN + G DIWS GV LY I
Sbjct: 148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI-ANGLDTFSGFKVDIWSAGVTLYNI 206
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
TG PF+ N+ L++ I +G + +P P +LL+ +LE P KR +I I+ W
Sbjct: 207 TTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW 266
Query: 306 FEQDYTPAN------PDDDEED 321
F + + PA P D +D
Sbjct: 267 FRKKHPPAEAPVPIPPSPDTKD 288
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + +++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P + +L S +YMV+EY GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+++D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLMIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
IK++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+AP ++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 150/289 (51%), Gaps = 52/289 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+ LG G V + + P+A+K+L+K + KI ++ EI L L HPN
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKI---VRTEIGVLLRLSHPN 109
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+++L E+ + ++I +VLE VTGGELFD+I KG E + +Q+++ V+Y H G+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS---KGNIKISD 192
HRDLK EN+L + +KI+D
Sbjct: 170 VHRDLKP-----------------------------------ENLLYATPAPDAPLKIAD 194
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGLS + +H L+ T CG+P Y APE+L Y G D+WS G+I Y++L G+ PF
Sbjct: 195 FGLSKIVEH---QVLMKTVCGTPGYCAPEILRGCAY-GPEVDMWSVGIITYILLCGFEPF 250
Query: 253 -DDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRIT 296
D+R ++++I ++ P W +S A++L+RK++ +P KR+T
Sbjct: 251 YDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT 299
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVK-----RITIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + K + + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q L ++E +TLG G+FG+V + ++G +A+KIL+K +++ LK + E
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 156 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 180
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + I
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXN 294
Query: 303 DEWF 306
+WF
Sbjct: 295 HKWF 298
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G CG+P +APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G G+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +L +++ +TLG G+FG+V + +SG +A+KIL+K +++ LK + E
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
L+ + P +V+L S +YMV+EYV GGE+F + GR E R Q++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ + +RDLK EN+L+D +G
Sbjct: 155 EYLHSLDLIYRDLKP-----------------------------------ENLLIDQQGY 179
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I+++DFG + R G G+P Y+APE++ ++GY+ A D W+ GV++Y +
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKAV-DWWALGVLIYEMAA 233
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKA 302
GY PF +Y+KI G + P S ++LLR +L+ + KR + IK
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 303 DEWF 306
+WF
Sbjct: 294 HKWF 297
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 50/315 (15%)
Query: 1 MVIAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQ 60
M I KK G Y+ + LG G +G+V +D + + A+KI+ K + +
Sbjct: 26 MFITSKK--GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSK 82
Query: 61 IKREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF 120
+ E+A LKLL HPN+++L++ K Y+V+E GGELFD+I + + E + +
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII 142
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
+Q++ GV+Y H + HRDLK P EN+
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLK---------------------------P--------ENL 167
Query: 181 LLDSKGN---IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
LL+SK IKI DFGLSA+ F + + G+ Y+APEVL + YD D+WS
Sbjct: 168 LLESKEKDALIKIVDFGLSAV---FENQKKMKERLGTAYYIAPEVLRKK-YD-EKCDVWS 222
Query: 238 CGVILYVILTGYLPFDDRNLAVLYQKIFRGD--FKLPKW--LSPGAQNLLRKILEPNPVK 293
GVIL+++L GY PF + + +K+ +G F P+W +S GA++L++++L+ + +
Sbjct: 223 IGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQR 282
Query: 294 RITIAGIKADEWFEQ 308
RI+ W ++
Sbjct: 283 RISAQQALEHPWIKE 297
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 46/301 (15%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L +++ RTLG G+FG+V + +G +A+K+L+K ++ LK + E L ++
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP ++R+ +I+M+++Y+ GGELF + R + ++ + Y H+
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K + +RDLK ENILLD G+IKI+D
Sbjct: 125 KDIIYRDLKP-----------------------------------ENILLDKNGHIKITD 149
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FG + ++ D + + CG+P+Y+APEV++ + Y+ + D WS G+++Y +L GY PF
Sbjct: 150 FGFA---KYVPD--VTYXLCGTPDYIAPEVVSTKPYNKSI-DWWSFGILIYEMLAGYTPF 203
Query: 253 DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI-----TIAGIKADEWFE 307
D N Y+KI + + P + + ++LL +++ + +R+ +K WF+
Sbjct: 204 YDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 263
Query: 308 Q 308
+
Sbjct: 264 E 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 57/329 (17%)
Query: 6 KKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITD------ 59
+K+EG Y R LG G +G+V ++ + A+K+++K++ + +D
Sbjct: 28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 60 ----QIKREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAE 115
+I EI+ LK L HPN+++L +V K Y+V E+ GGELF++I ++ + E +
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 116 GRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVL 175
+ +Q++ G+ Y H + HRD I+P
Sbjct: 148 AANIMKQILSGICYLHKHNIVHRD---------------------------IKP------ 174
Query: 176 QLENILLDSKG---NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT 232
ENILL++K NIKI DFGLS+ F D L G+ Y+APEVL +
Sbjct: 175 --ENILLENKNSLLNIKIVDFGLSSF---FSKDYKLRDRLGTAYYIAPEVLKKKY--NEK 227
Query: 233 SDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRG----DFKLPKWLSPGAQNLLRKILE 288
D+WSCGVI+Y++L GY PF +N + +K+ +G DF K +S A+ L++ +L
Sbjct: 228 CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLT 287
Query: 289 PNPVKRITIAGIKADEWFEQDYTPANPDD 317
+ KR T W ++ N D
Sbjct: 288 YDYNKRCTAEEALNSRWIKKYANNINKSD 316
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 157/294 (53%), Gaps = 46/294 (15%)
Query: 16 YELGRTLGEGNFGKVKFAQDL---DSGLPFAVKILEKNRIIHLKITDQI--KREIATLKL 70
+EL + LG+G+FGKV + + DSG +A+K+L+K LK+ D++ K E L
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKAT---LKVRDRVRTKMERDILAD 86
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+ HP VV+LH ++ K+Y++L+++ GG+LF +++ + E + + +L G+ +
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ G+ +RDLK ENILLD +G+IK+
Sbjct: 147 HSLGIIYRDLKP-----------------------------------ENILLDEEGHIKL 171
Query: 191 SDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYL 250
+DFGLS + + ++ CG+ Y+APEV+ +G+ ++D WS GV+++ +LTG L
Sbjct: 172 TDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSL 228
Query: 251 PFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
PF ++ I + +P++LS AQ+LLR + + NP R+ A+E
Sbjct: 229 PFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEE 282
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 154/286 (53%), Gaps = 46/286 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL---DSGLPFAVKILEKNRIIHLKITDQI--KREIATLK 69
++EL + LG+G+FGKV + + D+ +A+K+L+K LK+ D++ K E L
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT---LKVRDRVRTKMERDILV 81
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ HP +V+LH ++ K+Y++L+++ GG+LF +++ + E + + +L + +
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ G+ +RDLK ENILLD +G+IK
Sbjct: 142 LHSLGIIYRDLKP-----------------------------------ENILLDEEGHIK 166
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
++DFGLS + + ++ CG+ Y+APEV+ RG+ ++D WS GV+++ +LTG
Sbjct: 167 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGT 223
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
LPF ++ I + +P++LSP AQ+LLR + + NP R+
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 154/286 (53%), Gaps = 46/286 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL---DSGLPFAVKILEKNRIIHLKITDQI--KREIATLK 69
++EL + LG+G+FGKV + + D+ +A+K+L+K LK+ D++ K E L
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT---LKVRDRVRTKMERDILV 82
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ HP +V+LH ++ K+Y++L+++ GG+LF +++ + E + + +L + +
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ G+ +RDLK ENILLD +G+IK
Sbjct: 143 LHSLGIIYRDLKP-----------------------------------ENILLDEEGHIK 167
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
++DFGLS + + ++ CG+ Y+APEV+ RG+ ++D WS GV+++ +LTG
Sbjct: 168 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGT 224
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
LPF ++ I + +P++LSP AQ+LLR + + NP R+
Sbjct: 225 LPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 154/286 (53%), Gaps = 46/286 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL---DSGLPFAVKILEKNRIIHLKITDQI--KREIATLK 69
++EL + LG+G+FGKV + + D+ +A+K+L+K LK+ D++ K E L
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT---LKVRDRVRTKMERDILV 81
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ HP +V+LH ++ K+Y++L+++ GG+LF +++ + E + + +L + +
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ G+ +RDLK ENILLD +G+IK
Sbjct: 142 LHSLGIIYRDLKP-----------------------------------ENILLDEEGHIK 166
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
++DFGLS + + ++ CG+ Y+APEV+ RG+ ++D WS GV+++ +LTG
Sbjct: 167 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGT 223
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
LPF ++ I + +P++LSP AQ+LLR + + NP R+
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 269
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 42/291 (14%)
Query: 9 EGMRLGRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRII-HLKITDQIKRE 64
E +R +EL R LG+G +GKV + ++G FA+K+L+K I+ + K T K E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
L+ +KHP +V L + K+Y++LEY++GGELF ++ +G E ++
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ + H KG+ +RDLK ENI+L+
Sbjct: 132 MALGHLHQKGIIYRDLKP-----------------------------------ENIMLNH 156
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+G++K++DFGL H D + HT CG+ Y+APE+L G++ A D WS G ++Y
Sbjct: 157 QGHVKLTDFGLCKESIH--DGTVTHTFCGTIEYMAPEILMRSGHNRAV-DWWSLGALMYD 213
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
+LTG PF N KI + LP +L+ A++LL+K+L+ N R+
Sbjct: 214 MLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRL 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 38/292 (13%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G F K D D+ FA KI+ K+ ++ +++ EI+ + L H +VV H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+++VLE L + + L E E R +Q++ G Y H V HRDLK
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
L N+ L+ +KI DFGL+ ++
Sbjct: 149 -----------------------------------LGNLFLNEDLEVKIGDFGLATKVEY 173
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLY 261
D T CG+PNY+APEVL+ +G+ D+WS G I+Y +L G PF+ L Y
Sbjct: 174 --DGERKKTLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPFETSCLKETY 230
Query: 262 QKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPA 313
+I + ++ +PK ++P A +L++K+L+ +P R TI + DE+F Y PA
Sbjct: 231 LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 38/292 (13%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G F K D D+ FA KI+ K+ ++ +++ EI+ + L H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+++VLE L + + L E E R +Q++ G Y H V HRDLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
L N+ L+ +KI DFGL+ ++
Sbjct: 145 -----------------------------------LGNLFLNEDLEVKIGDFGLATKVEY 169
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLY 261
D T CG+PNY+APEVL+ +G+ D+WS G I+Y +L G PF+ L Y
Sbjct: 170 --DGERKKTLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 262 QKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPA 313
+I + ++ +PK ++P A +L++K+L+ +P R TI + DE+F Y PA
Sbjct: 227 LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 278
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 41/287 (14%)
Query: 12 RLG--RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
RLG +E R LG+G+FGKV A+ ++G +AVK+L+K+ I+ + E L
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 70 LLK-HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
L + HP + +L + +++ V+E+V GG+L I R EA R ++I +
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ H+KG+ +RDLK L+N+LLD +G+
Sbjct: 139 FLHDKGIIYRDLK-----------------------------------LDNVLLDHEGHC 163
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG+ + + T CG+P+Y+APE+L Y G D W+ GV+LY +L G
Sbjct: 164 KLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEMLY-GPAVDWWAMGVLLYEMLCG 220
Query: 249 YLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
+ PF+ N L++ I + P WL A +L+ + NP R+
Sbjct: 221 HAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRL 267
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 38/292 (13%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G F K D D+ FA KI+ K+ ++ +++ EI+ + L H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+++VLE L + + L E E R +Q++ G Y H V HRDLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
L N+ L+ +KI DFGL+ ++
Sbjct: 145 -----------------------------------LGNLFLNEDLEVKIGDFGLATKVEY 169
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLY 261
D T CG+PNY+APEVL+ +G+ D+WS G I+Y +L G PF+ L Y
Sbjct: 170 --DGERKKTLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 262 QKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPA 313
+I + ++ +PK ++P A +L++K+L+ +P R TI + DE+F Y PA
Sbjct: 227 LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 278
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 149/301 (49%), Gaps = 44/301 (14%)
Query: 1 MVIAEKKQEGMRLGRYELG-----RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHL 55
M ++KQ L R +L LG+G+FGKV A + +A+KIL+K+ +I
Sbjct: 1 MPSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD 60
Query: 56 KITDQIKREIATLKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEA 114
+ E L LL K P + +LH + ++Y V+EYV GG+L I G+ +E
Sbjct: 61 DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP 120
Query: 115 EGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNV 174
+ ++ G+ + H +G+ +RDLK
Sbjct: 121 QAVFYAAEISIGLFFLHKRGIIYRDLK--------------------------------- 147
Query: 175 LQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSD 234
L+N++LDS+G+IKI+DFG+ +H D CG+P+Y+APE++A + Y G + D
Sbjct: 148 --LDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEIIAYQPY-GKSVD 202
Query: 235 IWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKR 294
W+ GV+LY +L G PFD + L+Q I + PK LS A ++ + ++ +P KR
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKR 262
Query: 295 I 295
+
Sbjct: 263 L 263
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 42/291 (14%)
Query: 9 EGMRLGRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRII-HLKITDQIKRE 64
E +R +EL R LG+G +GKV + ++G FA+K+L+K I+ + K T K E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
L+ +KHP +V L + K+Y++LEY++GGELF ++ +G E ++
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ + H KG+ +RDLK ENI+L+
Sbjct: 132 MALGHLHQKGIIYRDLKP-----------------------------------ENIMLNH 156
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+G++K++DFGL H D + H CG+ Y+APE+L G++ A D WS G ++Y
Sbjct: 157 QGHVKLTDFGLCKESIH--DGTVTHXFCGTIEYMAPEILMRSGHNRAV-DWWSLGALMYD 213
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
+LTG PF N KI + LP +L+ A++LL+K+L+ N R+
Sbjct: 214 MLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRL 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 133
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 134 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 156
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + T CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 157 EGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 215
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 216 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 131 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 153
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + T CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 38/292 (13%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G F K D D+ FA KI+ K+ ++ +++ EI+ + L H +VV H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+++VLE L + + L E E R +Q++ G Y H V HRDLK
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
L N+ L+ +KI DFGL+ ++
Sbjct: 143 -----------------------------------LGNLFLNEDLEVKIGDFGLATKVEY 167
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLY 261
D CG+PNY+APEVL+ +G+ D+WS G I+Y +L G PF+ L Y
Sbjct: 168 --DGERKKVLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPFETSCLKETY 224
Query: 262 QKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPA 313
+I + ++ +PK ++P A +L++K+L+ +P R TI + DE+F Y PA
Sbjct: 225 LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 276
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 38/292 (13%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G F K D D+ FA KI+ K+ ++ +++ EI+ + L H +VV H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+++VLE L + + L E E R +Q++ G Y H V HRDLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
L N+ L+ +KI DFGL+ ++
Sbjct: 167 -----------------------------------LGNLFLNEDLEVKIGDFGLATKVEY 191
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLY 261
D CG+PNY+APEVL+ +G+ D+WS G I+Y +L G PF+ L Y
Sbjct: 192 --DGERKKVLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPFETSCLKETY 248
Query: 262 QKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPA 313
+I + ++ +PK ++P A +L++K+L+ +P R TI + DE+F Y PA
Sbjct: 249 LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 300
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 131 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 153
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + T CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 38/292 (13%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G F K D D+ FA KI+ K+ ++ +++ EI+ + L H +VV H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+++VLE L + + L E E R +Q++ G Y H V HRDLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
L N+ L+ +KI DFGL+ ++
Sbjct: 169 -----------------------------------LGNLFLNEDLEVKIGDFGLATKVEY 193
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLY 261
D CG+PNY+APEVL+ +G+ D+WS G I+Y +L G PF+ L Y
Sbjct: 194 --DGERKKVLCGTPNYIAPEVLSKKGHSFEV-DVWSIGCIMYTLLVGKPPFETSCLKETY 250
Query: 262 QKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPA 313
+I + ++ +PK ++P A +L++K+L+ +P R TI + DE+F Y PA
Sbjct: 251 LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 70/350 (20%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A+KI+ K + I + D ++ EI LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 72 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 131 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 155
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 156 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272
Query: 301 KADEWFEQDYTPANPDDDEEDIFVD-----NEAFSMHEV---PSDGGRTP 342
W + D+D + F D NE+ ++ +V PS + P
Sbjct: 273 LRHPWLQ--------DEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRP 314
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 70/350 (20%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A+KI+ K + I + D ++ EI LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 72 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 131 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 155
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 156 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272
Query: 301 KADEWFEQDYTPANPDDDEEDIFVD-----NEAFSMHEV---PSDGGRTP 342
W + D+D + F D NE+ ++ +V PS + P
Sbjct: 273 LRHPWLQ--------DEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRP 314
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 70/350 (20%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A+KI+ K + I + D ++ EI LK
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 71 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 129
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 130 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 154
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 155 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 212 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 271
Query: 301 KADEWFEQDYTPANPDDDEEDIFVD-----NEAFSMHEV---PSDGGRTP 342
W + D+D + F D NE+ ++ +V PS + P
Sbjct: 272 LRHPWLQ--------DEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRP 313
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y++G LG G F VK ++ +GL +A K ++K + + ++I+RE++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPN++ LH+V +++ + ++LE V+GGELFD +A K L E E +Q++DGV+Y H
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K +I
Sbjct: 134 KKIAHFDLKP-----------------------------------ENIMLLDKNIPIPHI 158
Query: 189 KISDFGLSALPQHFRDDGL-LHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
K+ DFGL+ H +DG+ G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 159 KLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 213
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + D + S A++ +RK+L KR+TI
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 304 EW 305
W
Sbjct: 274 PW 275
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 70/350 (20%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A+KI+ K + I + D ++ EI LK
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 78 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 137 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 161
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 162 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 219 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 278
Query: 301 KADEWFEQDYTPANPDDDEEDIFVD-----NEAFSMHEV---PSDGGRTP 342
W + D+D + F D NE+ ++ +V PS + P
Sbjct: 279 LRHPWLQ--------DEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRP 320
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 131 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 153
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 150/309 (48%), Gaps = 54/309 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A+KI+ K + I + D ++ EI LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 72 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 131 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 155
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 156 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272
Query: 301 KADEWFEQD 309
W + +
Sbjct: 273 LRHPWLQDE 281
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 131 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 153
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 158/345 (45%), Gaps = 54/345 (15%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHP 74
+ + +G+G+FGKV A+ + +AVK+L+K I+ K I E L K +KHP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+V LH + K+Y VL+Y+ GGELF + + E R ++ + Y H+
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ +RDLK ENILLDS+G+I ++DFG
Sbjct: 160 IVYRDLKP-----------------------------------ENILLDSQGHIVLTDFG 184
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L ++ + T CG+P Y+APEVL + YD T D W G +LY +L G PF
Sbjct: 185 LCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYS 241
Query: 255 RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKR-------------ITIAGIK 301
RN A +Y I +L ++ A++LL +L+ + KR + + I
Sbjct: 242 RNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN 301
Query: 302 ADEWFEQDYTPA-NPD-DDEEDIFVDNEAFSMHEVPSDGGRTPGS 344
D+ + TP NP+ D+ + F+ VP+ G+ P S
Sbjct: 302 WDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKAPDS 346
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 135
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 136 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 158
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 159 EGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 217
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 218 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG+G FGKV ++ +G +A+KIL K II E L+ +HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++ V+EY GGELF ++ + E R +++ + Y H++ V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K LEN++LD G+IKI+DFGL
Sbjct: 131 IK-----------------------------------LENLMLDKDGHIKITDFGLCK-- 153
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAV 259
+ D + CG+P Y+APEVL + Y G D W GV++Y ++ G LPF +++
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 260 LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
L++ I + + P+ LSP A++LL +L+ +P +R+ A E E +
Sbjct: 213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 39/291 (13%)
Query: 6 KKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
K + + + +E + LG+G FGKV ++ +G +A+KIL+K I+ E
Sbjct: 143 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 202
Query: 66 ATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID 125
L+ +HP + L + ++ V+EY GGELF ++ + E R +++
Sbjct: 203 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 262
Query: 126 GVSYCHN-KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y H+ K V +RDLK LEN++LD
Sbjct: 263 ALDYLHSEKNVVYRDLK-----------------------------------LENLMLDK 287
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G+IKI+DFGL + +D + T CG+P Y+APEVL + Y G D W GV++Y
Sbjct: 288 DGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYE 344
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
++ G LPF +++ L++ I + + P+ L P A++LL +L+ +P +R+
Sbjct: 345 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 395
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 39/291 (13%)
Query: 6 KKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
K + + + +E + LG+G FGKV ++ +G +A+KIL+K I+ E
Sbjct: 140 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 199
Query: 66 ATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID 125
L+ +HP + L + ++ V+EY GGELF ++ + E R +++
Sbjct: 200 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 259
Query: 126 GVSYCHN-KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y H+ K V +RDLK LEN++LD
Sbjct: 260 ALDYLHSEKNVVYRDLK-----------------------------------LENLMLDK 284
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
G+IKI+DFGL + +D + T CG+P Y+APEVL + Y G D W GV++Y
Sbjct: 285 DGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYE 341
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
++ G LPF +++ L++ I + + P+ L P A++LL +L+ +P +R+
Sbjct: 342 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 392
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 146/302 (48%), Gaps = 58/302 (19%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG G FG V ++ SGL +K + K+R +QI+ EI LK L HPN++++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS---KGR-LQEAEGRKLFQQLIDGVSYCHNKGV 135
EV +Y+V+E GGEL ++I S +G+ L E +L +Q+++ ++Y H++ V
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS---KGNIKISD 192
H+DLK ENIL IKI D
Sbjct: 146 VHKDLKP-----------------------------------ENILFQDTSPHSPIKIID 170
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
FGL+ L F+ D G+ Y+APEV DIWS GV++Y +LTG LPF
Sbjct: 171 FGLAEL---FKSDEHSTNAAGTALYMAPEVFKRDV--TFKCDIWSAGVVMYFLLTGCLPF 225
Query: 253 DDRNLAVLYQKIFRGDFKLPKW------LSPGAQNLLRKILEPNPVKRITIAGIKADEWF 306
+L + QK +K P + L+P A +LL+++L +P +R + A + EWF
Sbjct: 226 TGTSLEEVQQK---ATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
Query: 307 EQ 308
+Q
Sbjct: 283 KQ 284
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 154/307 (50%), Gaps = 54/307 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLKLLKH 73
YEL +G+G F V+ + ++G FAVKI++ + T+ +KRE + +LKH
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR----LQEAEGRKLFQQLIDGVSY 129
P++V L E +S +YMV E++ G +L +I + EA +Q+++ + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-- 187
CH+ + HRD+K EN+LL SK N
Sbjct: 146 CHDNNIIHRDVKP-----------------------------------ENVLLASKENSA 170
Query: 188 -IKISDFGLSALPQHFRDDGLLH-TTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+K+ DFG++ + GL+ G+P+++APEV+ Y G D+W CGVIL+++
Sbjct: 171 PVKLGDFGVAI---QLGESGLVAGGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFIL 226
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLP--KW--LSPGAQNLLRKILEPNPVKRITIAGIK 301
L+G LPF L++ I +G +K+ +W +S A++L+R++L +P +RIT+
Sbjct: 227 LSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 302 ADEWFEQ 308
W ++
Sbjct: 286 NHPWLKE 292
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 54/309 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A++I+ K + I + D ++ EI LK
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 211 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 269
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 270 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 294
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 295 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 352 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 411
Query: 301 KADEWFEQD 309
W + +
Sbjct: 412 LRHPWLQDE 420
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 54/309 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNR--IIHLKITD---QIKREIATLKL 70
Y + +TLG G G+VK A + + A++I+ K + I + D ++ EI LK
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L HP ++++ ++ Y+VLE + GGELFDK+ RL+EA + F Q++ V Y
Sbjct: 197 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--- 187
H G+ HRDLK EN+LL S+
Sbjct: 256 HENGIIHRDLKP-----------------------------------ENVLLSSQEEDCL 280
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGVILYVI 245
IKI+DFG S + + L+ T CG+P Y+APEVL + G G D WS GVIL++
Sbjct: 281 IKITDFGHSKI---LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 246 LTGYLPFDD-RNLAVLYQKIFRGDFK-LPK-W--LSPGAQNLLRKILEPNPVKRITIAGI 300
L+GY PF + R L +I G + +P+ W +S A +L++K+L +P R T
Sbjct: 338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397
Query: 301 KADEWFEQD 309
W + +
Sbjct: 398 LRHPWLQDE 406
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKIT-DQIKREIATLKLLK 72
Y++G LG G F VK ++ +GL +A K ++K +R ++ ++I+RE++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
H NV+ LH+V +++ + ++LE V+GGELFD +A K L E E +Q++DGV+Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K +I
Sbjct: 134 KKIAHFDLKP-----------------------------------ENIMLLDKNIPIPHI 158
Query: 189 KISDFGLSALPQHFRDDGL-LHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
K+ DFGL+ H +DG+ G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 159 KLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 213
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + D + S A++ +RK+L KR+TI
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 304 EW 305
W
Sbjct: 274 PW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKIT-DQIKREIATLKLLK 72
Y++G LG G F VK ++ +GL +A K ++K +R ++ ++I+RE++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
H NV+ LH+V +++ + ++LE V+GGELFD +A K L E E +Q++DGV+Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K +I
Sbjct: 134 KKIAHFDLKP-----------------------------------ENIMLLDKNIPIPHI 158
Query: 189 KISDFGLSALPQHFRDDGL-LHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
K+ DFGL+ H +DG+ G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 159 KLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 213
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + D + S A++ +RK+L KR+TI
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 304 EW 305
W
Sbjct: 274 PW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKIT-DQIKREIATLKLLK 72
Y++G LG G F VK ++ +GL +A K ++K +R ++ ++I+RE++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
H NV+ LH+V +++ + ++LE V+GGELFD +A K L E E +Q++DGV+Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K +I
Sbjct: 134 KKIAHFDLKP-----------------------------------ENIMLLDKNIPIPHI 158
Query: 189 KISDFGLSALPQHFRDDGL-LHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
K+ DFGL+ H +DG+ G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 159 KLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 213
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + D + S A++ +RK+L KR+TI
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 304 EW 305
W
Sbjct: 274 PW 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKIT-DQIKREIATLKLLK 72
Y++G LG G F VK ++ +GL +A K ++K +R ++ ++I+RE++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
H NV+ LH+V +++ + ++LE V+GGELFD +A K L E E +Q++DGV+Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K +I
Sbjct: 134 KKIAHFDLKP-----------------------------------ENIMLLDKNIPIPHI 158
Query: 189 KISDFGLSALPQHFRDDGL-LHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
K+ DFGL+ H +DG+ G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 159 KLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 213
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + D + S A++ +RK+L KR+TI
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 304 EW 305
W
Sbjct: 274 PW 275
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 139/284 (48%), Gaps = 39/284 (13%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ +E + LG+G FGKV ++ +G +A+KIL+K I+ E L+ +
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP + L + ++ V+EY GGELF ++ + E R +++ + Y H+
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 133 -KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K V +RDLK LEN++LD G+IKI+
Sbjct: 128 EKNVVYRDLK-----------------------------------LENLMLDKDGHIKIT 152
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGL + +D + CG+P Y+APEVL + Y G D W GV++Y ++ G LP
Sbjct: 153 DFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLP 209
Query: 252 FDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
F +++ L++ I + + P+ L P A++LL +L+ +P +R+
Sbjct: 210 FYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 139/284 (48%), Gaps = 39/284 (13%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ +E + LG+G FGKV ++ +G +A+KIL+K I+ E L+ +
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP + L + ++ V+EY GGELF ++ + E R +++ + Y H+
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 133 -KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K V +RDLK LEN++LD G+IKI+
Sbjct: 127 EKNVVYRDLK-----------------------------------LENLMLDKDGHIKIT 151
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGL + +D + CG+P Y+APEVL + Y G D W GV++Y ++ G LP
Sbjct: 152 DFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLP 208
Query: 252 FDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
F +++ L++ I + + P+ L P A++LL +L+ +P +R+
Sbjct: 209 FYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 139/284 (48%), Gaps = 39/284 (13%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ +E + LG+G FGKV ++ +G +A+KIL+K I+ E L+ +
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP + L + ++ V+EY GGELF ++ + E R +++ + Y H+
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 133 -KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K V +RDLK LEN++LD G+IKI+
Sbjct: 129 EKNVVYRDLK-----------------------------------LENLMLDKDGHIKIT 153
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFGL + +D + CG+P Y+APEVL + Y G D W GV++Y ++ G LP
Sbjct: 154 DFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLP 210
Query: 252 FDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
F +++ L++ I + + P+ L P A++LL +L+ +P +R+
Sbjct: 211 FYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKIT-DQIKREIATLKLLK 72
Y++G LG G F VK ++ +GL +A K ++K +R ++ ++I+RE++ L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
H NV+ LH+V +++ + ++LE V+GGELFD +A K L E E +Q++DGV+Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K +I
Sbjct: 134 KKIAHFDLKP-----------------------------------ENIMLLDKNIPIPHI 158
Query: 189 KISDFGLSALPQHFRDDGL-LHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
K+ DFGL+ H +DG+ G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 159 KLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 213
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + D + S A++ +RK+L KR+TI
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 304 EW 305
W
Sbjct: 274 PW 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 152/325 (46%), Gaps = 69/325 (21%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK-------------- 56
++L +Y L +G+G++G VK A + + +A+K+L K ++I
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 57 ---------ITDQIKREIATLKLLKHPNVVRLHEVL--ASKSKIYMVLEYVTGGELFDKI 105
+Q+ +EIA LK L HPNVV+L EVL ++ +YMV E V G + + +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-V 128
Query: 106 ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMI 165
+ L E + R FQ LI G+ Y H + + HRD+K
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP----------------------- 165
Query: 166 VIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFR-DDGLLHTTCGSPNYVAPEVLA 224
N+L+ G+IKI+DFG+S F+ D LL T G+P ++APE L+
Sbjct: 166 ------------SNLLVGEDGHIKIADFGVS---NEFKGSDALLSNTVGTPAFMAPESLS 210
Query: 225 N--RGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKW--LSPGAQ 280
+ + G D+W+ GV LY + G PF D + L+ KI + P ++ +
Sbjct: 211 ETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLK 270
Query: 281 NLLRKILEPNPVKRITIAGIKADEW 305
+L+ ++L+ NP RI + IK W
Sbjct: 271 DLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 50/301 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
YE+G LG G F V+ + +G +A K ++K R+ + ++I+RE+ L+ ++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPN++ LH++ +K+ + ++LE V+GGELFD +A K L E E + +Q++DGV Y H+
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K I
Sbjct: 127 KRIAHFDLKP-----------------------------------ENIMLLDKNVPNPRI 151
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K+ DFG++ G+P +VAPE++ N G +D+WS GVI Y++L+G
Sbjct: 152 KLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSG 207
Query: 249 YLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
PF L + + D + S A++ +R++L +P +R+TIA
Sbjct: 208 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267
Query: 305 W 305
W
Sbjct: 268 W 268
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 132 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 156
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 157 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 211
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 212 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
Query: 304 EW 305
W
Sbjct: 272 PW 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 132 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 156
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 157 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 211
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 212 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
Query: 304 EW 305
W
Sbjct: 272 PW 273
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPAFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 45/296 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +++ +EL + LG+G+FGKV A+ + FA+K L+K+ ++ + D ++ +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL---MDDDVECTMVE 68
Query: 68 LKLL----KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
++L +HP + + +K ++ V+EY+ GG+L I S + + ++
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 128
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
I G+ + H+KG+ +RDLK L+NILLD
Sbjct: 129 ILGLQFLHSKGIVYRDLK-----------------------------------LDNILLD 153
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
G+IKI+DFG+ ++ D + CG+P+Y+APE+L + Y+ + D WS GV+LY
Sbjct: 154 KDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSV-DWWSFGVLLY 210
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAG 299
+L G PF ++ L+ I + P+WL A++LL K+ P KR+ + G
Sbjct: 211 EMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG 266
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 39/286 (13%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
M+L + LG+G+FGKV ++ + +AVKIL+K+ +I + E L L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K P + +LH + ++Y V+EYV GG+L I GR +E ++ G+ +
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
+KG+ +RDLK L+N++LDS+G+IK
Sbjct: 137 LQSKGIIYRDLK-----------------------------------LDNVMLDSEGHIK 161
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
I+DFG+ ++ D CG+P+Y+APE++A + Y G + D W+ GV+LY +L G
Sbjct: 162 IADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQ 218
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
PF+ + L+Q I + PK +S A + + ++ +P KR+
Sbjct: 219 APFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRL 264
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 151 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 175
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 176 AKVLSPESKQARANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 234
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 235 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 155 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 179
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 180 AKVLSPESKQARANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 238
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 239 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 278
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++LE V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 152 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 176
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 177 AKVLSPESKQARANAFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 235
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 39/286 (13%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
M+L + LG+G+FGKV ++ + +AVKIL+K+ +I + E L L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K P + +LH + ++Y V+EYV GG+L I GR +E ++ G+ +
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
+KG+ +RDLK L+N++LDS+G+IK
Sbjct: 458 LQSKGIIYRDLK-----------------------------------LDNVMLDSEGHIK 482
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
I+DFG+ ++ D CG+P+Y+APE++A + Y G + D W+ GV+LY +L G
Sbjct: 483 IADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQ 539
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
PF+ + L+Q I + PK +S A + + ++ +P KR+
Sbjct: 540 APFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRL 585
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 144/303 (47%), Gaps = 57/303 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
YE+ +G G++ K + + FAVKI++K++ D + L+ +HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK------RDPTEEIEILLRYGQHPN 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++ L +V +Y+V E + GGEL DKI + E E + + V Y H +GV
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL-LDSKGN---IKIS 191
HRDLK NIL +D GN I+I
Sbjct: 138 VHRDLKP-----------------------------------SNILYVDESGNPESIRIC 162
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFG + Q ++GLL T C + N+VAPEVL +GYD A DIWS GV+LY +LTGY P
Sbjct: 163 DFGFAK--QLRAENGLLMTPCYTANFVAPEVLERQGYDAA-CDIWSLGVLLYTMLTGYTP 219
Query: 252 F----DDRNLAVLYQKIFRGDFKLPK--W--LSPGAQNLLRKILEPNPVKRITIAGIKAD 303
F DD +L +I G F L W +S A++L+ K+L +P +R+T A +
Sbjct: 220 FANGPDDTPEEIL-ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278
Query: 304 EWF 306
W
Sbjct: 279 PWI 281
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 131 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 155
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 156 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 214
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITI------AGIKADEWFE 307
N +++QKI + ++ P+ P A++L+ K+L + KR+ +KA +FE
Sbjct: 215 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 130 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 154
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 155 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 213
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 214 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 253
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 129 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 153
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 154 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 212
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 213 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 252
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 136 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 160
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 161 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 219
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 220 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 259
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 152 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 176
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 235
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 50/301 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
YE+G LG G F V+ + +G +A K ++K R+ + ++I+RE+ L+ ++
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPN++ LH++ +K+ + ++LE V+GGELFD +A K L E E + +Q++DGV Y H+
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K I
Sbjct: 148 KRIAHFDLKP-----------------------------------ENIMLLDKNVPNPRI 172
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K+ DFG++ G+P +VAPE++ N G +D+WS GVI Y++L+G
Sbjct: 173 KLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSG 228
Query: 249 YLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
PF L + + D + S A++ +R++L +P +R+ IA
Sbjct: 229 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 288
Query: 305 W 305
W
Sbjct: 289 W 289
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 132 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 156
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 157 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 215
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITI------AGIKADEWFE 307
N +++QKI + ++ P+ P A++L+ K+L + KR+ +KA +FE
Sbjct: 216 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 154 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 178
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 237
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 151 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 175
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 176 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 234
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 235 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 274
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 152 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 176
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 235
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 159 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 183
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 184 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 242
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 243 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 282
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 50/301 (16%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
YE+G LG G F V+ + +G +A K ++K R+ + ++I+RE+ L+ ++
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPN++ LH++ +K+ + ++LE V+GGELFD +A K L E E + +Q++DGV Y H+
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG----NI 188
K + H DLK ENI+L K I
Sbjct: 134 KRIAHFDLKP-----------------------------------ENIMLLDKNVPNPRI 158
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K+ DFG++ G+P +VAPE++ N G +D+WS GVI Y++L+G
Sbjct: 159 KLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSG 214
Query: 249 YLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
PF L + + D + S A++ +R++L +P +R+ IA
Sbjct: 215 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 274
Query: 305 W 305
W
Sbjct: 275 W 275
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 154 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 178
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 237
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 154 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 178
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 237
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 155 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 179
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 180 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 238
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 239 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 278
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 157 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 181
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 182 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 240
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P P A++L+ K+L + KR+
Sbjct: 241 NEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRL 280
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F A++L + +A+KILEK II + RE + L HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 152 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 176
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 235
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 147/302 (48%), Gaps = 52/302 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---ITDQIKREIATLKLLK 72
Y+ G LG G F VK ++ +GL +A K ++K R + + I+RE++ LK ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HPNV+ LHEV +K+ + ++ E V GGELFD +A K L E E + +Q+++GV Y H+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI-LLDS---KGNI 188
+ H DLK ENI LLD K I
Sbjct: 133 LQIAHFDLKP-----------------------------------ENIMLLDRNVPKPRI 157
Query: 189 KISDFGLSALPQHFRDDG-LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ H D G G+P +VAPE++ N G +D+WS GVI Y++L+
Sbjct: 158 KIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLS 212
Query: 248 GYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
G PF LA + + + + S A++ +R++L +P KR+TI
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 304 EW 305
W
Sbjct: 273 PW 274
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 154 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 178
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-AXKSSDLWALGCIIYQLVAGLPPFRAG 237
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++ KI + ++ P+ P A++L+ K+L + KR+
Sbjct: 238 NEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y GEL I G E R +++ + Y H KG+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 154 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 178
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + + G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAG 237
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++ KI + ++ P+ P A++L+ K+L + KR+
Sbjct: 238 NEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
++ G+ LGEG+F V A++L + +A+KILEK II + RE + L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V+L+ K+Y L Y G L I G E R +++ + Y H KG+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK ENILL+ +I+I+DFG
Sbjct: 154 IHRDLKP-----------------------------------ENILLNEDMHIQITDFGT 178
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + ++ G+ YV+PE+L + +SD+W+ G I+Y ++ G PF
Sbjct: 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKS-ASKSSDLWALGCIIYQLVAGLPPFRAG 237
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
N +++QKI + ++ P+ P A++L+ K+L + KR+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 45/296 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
Q +++ + L + LG+G+FGKV A+ + FA+K L+K+ ++ + D ++ +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL---MDDDVECTMVE 67
Query: 68 LKLL----KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
++L +HP + + +K ++ V+EY+ GG+L I S + + ++
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
I G+ + H+KG+ +RDLK L+NILLD
Sbjct: 128 ILGLQFLHSKGIVYRDLK-----------------------------------LDNILLD 152
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
G+IKI+DFG+ ++ D + CG+P+Y+APE+L + Y+ + D WS GV+LY
Sbjct: 153 KDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV-DWWSFGVLLY 209
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAG 299
+L G PF ++ L+ I + P+WL A++LL K+ P KR+ + G
Sbjct: 210 EMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG 265
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 143/303 (47%), Gaps = 57/303 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
YE+ +G G++ K + FAVKI++K++ T++I+ L+ +HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK---RDPTEEIE---ILLRYGQHPN 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++ L +V +Y+V E GGEL DKI + E E + + V Y H +GV
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL-LDSKGN---IKIS 191
HRDLK NIL +D GN I+I
Sbjct: 138 VHRDLKP-----------------------------------SNILYVDESGNPESIRIC 162
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFG + Q ++GLL T C + N+VAPEVL +GYD A DIWS GV+LY LTGY P
Sbjct: 163 DFGFAK--QLRAENGLLXTPCYTANFVAPEVLERQGYDAA-CDIWSLGVLLYTXLTGYTP 219
Query: 252 F----DDRNLAVLYQKIFRGDFKLPK--W--LSPGAQNLLRKILEPNPVKRITIAGIKAD 303
F DD +L +I G F L W +S A++L+ K L +P +R+T A +
Sbjct: 220 FANGPDDTPEEIL-ARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRH 278
Query: 304 EWF 306
W
Sbjct: 279 PWI 281
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 54/307 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLKLLKH 73
YEL +G+G F V+ + ++G FAVKI++ + T+ +KRE + +LKH
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR----LQEAEGRKLFQQLIDGVSY 129
P++V L E +S +YMV E++ G +L +I + EA +Q+++ + Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-- 187
CH+ + HRD+K C +LL SK N
Sbjct: 148 CHDNNIIHRDVK---PHC--------------------------------VLLASKENSA 172
Query: 188 -IKISDFGLSALPQHFRDDGLLH-TTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+K+ FG++ + GL+ G+P+++APEV+ Y G D+W CGVIL+++
Sbjct: 173 PVKLGGFGVAI---QLGESGLVAGGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFIL 228
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLP--KW--LSPGAQNLLRKILEPNPVKRITIAGIK 301
L+G LPF L++ I +G +K+ +W +S A++L+R++L +P +RIT+
Sbjct: 229 LSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 287
Query: 302 ADEWFEQ 308
W ++
Sbjct: 288 NHPWLKE 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 54/307 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLKLLKH 73
YEL +G+G F V+ + ++G FAVKI++ + T+ +KRE + +LKH
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR----LQEAEGRKLFQQLIDGVSY 129
P++V L E +S +YMV E++ G +L +I + EA +Q+++ + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-- 187
CH+ + HRD+K C +LL SK N
Sbjct: 146 CHDNNIIHRDVK---PHC--------------------------------VLLASKENSA 170
Query: 188 -IKISDFGLSALPQHFRDDGLLH-TTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+K+ FG++ + GL+ G+P+++APEV+ Y G D+W CGVIL+++
Sbjct: 171 PVKLGGFGVAI---QLGESGLVAGGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFIL 226
Query: 246 LTGYLPFDDRNLAVLYQKIFRGDFKLP--KW--LSPGAQNLLRKILEPNPVKRITIAGIK 301
L+G LPF L++ I +G +K+ +W +S A++L+R++L +P +RIT+
Sbjct: 227 LSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 302 ADEWFEQ 308
W ++
Sbjct: 286 NHPWLKE 292
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 161/309 (52%), Gaps = 52/309 (16%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDL---DSGLPFAVKILEKNRIIH-LKITDQIKRE 64
E + + +EL + LG G +GKV + + D+G +A+K+L+K I+ K T+ + E
Sbjct: 49 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTE 108
Query: 65 IATLKLLKH-PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
L+ ++ P +V LH +++K++++L+Y+ GGELF ++ + R E E + ++
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI 168
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ + + H G+ +RD+K LENILLD
Sbjct: 169 VLALEHLHKLGIIYRDIK-----------------------------------LENILLD 193
Query: 184 SKGNIKISDFGLSALPQHFRDDGL--LHTTCGSPNYVAPEVL--ANRGYDGATSDIWSCG 239
S G++ ++DFGLS + F D + CG+ Y+AP+++ + G+D A D WS G
Sbjct: 194 SNGHVVLTDFGLS---KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAV-DWWSLG 249
Query: 240 VILYVILTGYLPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
V++Y +LTG PF + + A + ++I + + P+ +S A++L++++L +P KR+
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 309
Query: 296 TIAGIKADE 304
ADE
Sbjct: 310 GCGPRDADE 318
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 147/300 (49%), Gaps = 48/300 (16%)
Query: 6 KKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
K + L ++L R +G G++ KV + + +A+++++K + + D ++ E
Sbjct: 44 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEK 103
Query: 66 ATL-KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ HP +V LH ++S+++ V+EYV GG+L + + +L E R ++
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
++Y H +G+ +RDLK L+N+LLDS
Sbjct: 164 LALNYLHERGIIYRDLK-----------------------------------LDNVLLDS 188
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+G+IK++D+G+ + R T CG+PNY+APE+L Y G + D W+ GV+++
Sbjct: 189 EGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFE 245
Query: 245 ILTGYLPFD--------DRNLA-VLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
++ G PFD D+N L+Q I ++P+ LS A ++L+ L +P +R+
Sbjct: 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 305
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 144/310 (46%), Gaps = 55/310 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILE--KNRIIHLK---ITDQIKREIATLK 69
+Y+ +G G V+ +G FAVKI+E R+ + + + +RE L+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 70 LLK-HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
+ HP+++ L + S S +++V + + GELFD + K L E E R + + L++ VS
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ H + HRDLK ENILLD I
Sbjct: 215 FLHANNIVHRDLKP-----------------------------------ENILLDDNMQI 239
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVL------ANRGYDGATSDIWSCGVIL 242
++SDFG S H L CG+P Y+APE+L + GY G D+W+CGVIL
Sbjct: 240 RLSDFGFSC---HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY-GKEVDLWACGVIL 295
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIA 298
+ +L G PF R ++ + I G ++ P+W S ++L+ ++L+ +P R+T
Sbjct: 296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAE 355
Query: 299 GIKADEWFEQ 308
+FE+
Sbjct: 356 QALQHPFFER 365
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 57/305 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y + T+G G++ + K + + +AVK+++K++ D + L+ +HPN
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK------RDPSEEIEILLRYGQHPN 82
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++ L +V +Y+V E + GGEL DKI + E E + + V Y H++GV
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL-LDSKGN---IKIS 191
HRDLK NIL +D GN ++I
Sbjct: 143 VHRDLKP-----------------------------------SNILYVDESGNPECLRIC 167
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFG + Q ++GLL T C + N+VAPEVL +GYD DIWS G++LY +L GY P
Sbjct: 168 DFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGYDEG-CDIWSLGILLYTMLAGYTP 224
Query: 252 F----DDRNLAVLYQKIFRGDFKLP--KW--LSPGAQNLLRKILEPNPVKRITIAGIKAD 303
F D +L +I G F L W +S A++L+ K+L +P +R+T +
Sbjct: 225 FANGPSDTPEEIL-TRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 304 EWFEQ 308
W Q
Sbjct: 284 PWVTQ 288
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 57/305 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y + T+G G++ + K + + +AVK+++K++ D + L+ +HPN
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK------RDPSEEIEILLRYGQHPN 82
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
++ L +V +Y+V E + GGEL DKI + E E + + V Y H++GV
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL-LDSKGN---IKIS 191
HRDLK NIL +D GN ++I
Sbjct: 143 VHRDLKP-----------------------------------SNILYVDESGNPECLRIC 167
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
DFG + Q ++GLL T C + N+VAPEVL +GYD DIWS G++LY +L GY P
Sbjct: 168 DFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGYDEG-CDIWSLGILLYTMLAGYTP 224
Query: 252 F----DDRNLAVLYQKIFRGDFKLP--KW--LSPGAQNLLRKILEPNPVKRITIAGIKAD 303
F D +L +I G F L W +S A++L+ K+L +P +R+T +
Sbjct: 225 FANGPSDTPEEIL-TRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 304 EWFEQ 308
W Q
Sbjct: 284 PWVTQ 288
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 6 KKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
K + L ++L R +G G++ KV + + +A+K+++K + + D ++ E
Sbjct: 12 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK 71
Query: 66 ATL-KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ HP +V LH ++S+++ V+EYV GG+L + + +L E R ++
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
++Y H +G+ +RDLK L+N+LLDS
Sbjct: 132 LALNYLHERGIIYRDLK-----------------------------------LDNVLLDS 156
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+G+IK++D+G+ + R CG+PNY+APE+L Y G + D W+ GV+++
Sbjct: 157 EGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFE 213
Query: 245 ILTGYLPFD--------DRNLA-VLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
++ G PFD D+N L+Q I ++P+ +S A ++L+ L +P +R+
Sbjct: 214 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERL 273
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 48/293 (16%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLL 71
L ++L R +G G++ KV + + +A+K+++K + + D ++ E +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 72 KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
HP +V LH ++S+++ V+EYV GG+L + + +L E R ++ ++Y H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+G+ +RDLK L+N+LLDS+G+IK++
Sbjct: 124 ERGIIYRDLK-----------------------------------LDNVLLDSEGHIKLT 148
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
D+G+ + R CG+PNY+APE+L Y G + D W+ GV+++ ++ G P
Sbjct: 149 DYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSP 205
Query: 252 FD--------DRNLA-VLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
FD D+N L+Q I ++P+ LS A ++L+ L +P +R+
Sbjct: 206 FDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 48/293 (16%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLL 71
L ++L R +G G++ KV + + +A+K+++K + + D ++ E +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 72 KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
HP +V LH ++S+++ V+EYV GG+L + + +L E R ++ ++Y H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+G+ +RDLK L+N+LLDS+G+IK++
Sbjct: 128 ERGIIYRDLK-----------------------------------LDNVLLDSEGHIKLT 152
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP 251
D+G+ + R CG+PNY+APE+L Y G + D W+ GV+++ ++ G P
Sbjct: 153 DYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSP 209
Query: 252 FD--------DRNLA-VLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
FD D+N L+Q I ++P+ LS A ++L+ L +P +R+
Sbjct: 210 FDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 262
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 148/336 (44%), Gaps = 72/336 (21%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK-ITDQIKREIATLKLLK-- 72
Y LG LG+G FG V L L A+K++ +NR++ ++D + + L K
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 73 ----HPNVVRLHEVLASKSKIYMVLEY-VTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
HP V+RL + ++ +VLE + +LFD I KG L E R F Q++ +
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKG 186
+CH++GV HRD+K ENIL+D +G
Sbjct: 153 QHCHSRGVVHRDIKD-----------------------------------ENILIDLRRG 177
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
K+ DFG AL D+ G+ Y PE ++ Y + +WS G++LY ++
Sbjct: 178 CAKLIDFGSGAL---LHDEPYTDFD-GTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233
Query: 247 TGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWF 306
G +PF +R+ Q+I + P +SP L+R+ L P P R ++ I D W
Sbjct: 234 CGDIPF-ERD-----QEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
Query: 307 EQDYTPANPDDDEEDIFVDNEAFSMHEVPSDGGRTP 342
+ TPA ED+ ++ PS GG P
Sbjct: 288 Q---TPA------EDVPLN---------PSKGGPAP 305
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 149/311 (47%), Gaps = 49/311 (15%)
Query: 8 QEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++G Y++ LG G FG V + +G F K + + K T +K EI+
Sbjct: 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD-KYT--VKNEISI 101
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDG 126
+ L HP ++ LH+ K ++ ++LE+++GGELFD+IA++ ++ EAE +Q +G
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK- 185
+ + H + H D+K ENI+ ++K
Sbjct: 162 LKHMHEHSIVHLDIKP-----------------------------------ENIMCETKK 186
Query: 186 -GNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
++KI DFGL+ D ++ T + + APE++ +R G +D+W+ GV+ YV
Sbjct: 187 ASSVKIIDFGLAT---KLNPDEIVKVTTATAEFAAPEIV-DREPVGFYTDMWAIGVLGYV 242
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPK----WLSPGAQNLLRKILEPNPVKRITIAGI 300
+L+G PF + Q + R D++ + +SP A++ ++ +L+ P KR+T+
Sbjct: 243 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 302
Query: 301 KADEWFEQDYT 311
W + D++
Sbjct: 303 LEHPWLKGDHS 313
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 53/309 (17%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L Y++ LG G FG V + +G FA K + H + +++EI T+ +L+
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLR 106
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK-GRLQEAEGRKLFQQLIDGVSYCH 131
HP +V LH+ +++ M+ E+++GGELF+K+A + ++ E E + +Q+ G+ + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--GNIK 189
H DLK ENI+ +K +K
Sbjct: 167 ENNYVHLDLKP-----------------------------------ENIMFTTKRSNELK 191
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
+ DFGL+A H + T G+ + APEV + G +D+WS GV+ Y++L+G
Sbjct: 192 LIDFGLTA---HLDPKQSVKVTTGTAEFAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGL 247
Query: 250 LPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
PF DD L + + D +S ++ +RK+L +P R+TI W
Sbjct: 248 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 307
Query: 306 FEQDYTPAN 314
TP N
Sbjct: 308 L----TPGN 312
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 53/309 (17%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L Y++ LG G FG V + +G FA K + H + +++EI T+ +L+
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLR 212
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK-GRLQEAEGRKLFQQLIDGVSYCH 131
HP +V LH+ +++ M+ E+++GGELF+K+A + ++ E E + +Q+ G+ + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--GNIK 189
H DLK ENI+ +K +K
Sbjct: 273 ENNYVHLDLKP-----------------------------------ENIMFTTKRSNELK 297
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
+ DFGL+A H + T G+ + APEV + G +D+WS GV+ Y++L+G
Sbjct: 298 LIDFGLTA---HLDPKQSVKVTTGTAEFAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGL 353
Query: 250 LPF----DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
PF DD L + + D +S ++ +RK+L +P R+TI W
Sbjct: 354 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413
Query: 306 FEQDYTPAN 314
TP N
Sbjct: 414 L----TPGN 418
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 55/284 (19%)
Query: 35 DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHEVLASKSKIYMVLE 94
D+ G F+ + +++ R LK D ++ K+ HPN+++L + + + ++V +
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILR------KVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 95 YVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATL 154
+ GELFD + K L E E RK+ + L++ + H + HRDLK
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP------------ 152
Query: 155 QVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGS 214
ENILLD NIK++DFG S L + CG+
Sbjct: 153 -----------------------ENILLDDDMNIKLTDFGFSC---QLDPGEKLRSVCGT 186
Query: 215 PNYVAPEVLA------NRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGD 268
P+Y+APE++ + GY G D+WS GVI+Y +L G PF R ++ + I G+
Sbjct: 187 PSYLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 269 FKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
++ P+W S ++L+ + L P KR T A +F+Q
Sbjct: 246 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 55/284 (19%)
Query: 35 DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHEVLASKSKIYMVLE 94
D+ G F+ + +++ R LK D ++ K+ HPN+++L + + + ++V +
Sbjct: 38 DVTGGGSFSAEEVQELREATLKEVDILR------KVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 95 YVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATL 154
+ GELFD + K L E E RK+ + L++ + H + HRDLK
Sbjct: 92 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP------------ 139
Query: 155 QVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGS 214
ENILLD NIK++DFG S L CG+
Sbjct: 140 -----------------------ENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGT 173
Query: 215 PNYVAPEVLA------NRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGD 268
P+Y+APE++ + GY G D+WS GVI+Y +L G PF R ++ + I G+
Sbjct: 174 PSYLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 232
Query: 269 FKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
++ P+W S ++L+ + L P KR T A +F+Q
Sbjct: 233 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 55/284 (19%)
Query: 35 DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHEVLASKSKIYMVLE 94
D+ G F+ + +++ R LK D ++ K+ HPN+++L + + + ++V +
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILR------KVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 95 YVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATL 154
+ GELFD + K L E E RK+ + L++ + H + HRDLK
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP------------ 152
Query: 155 QVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGS 214
ENILLD NIK++DFG S L CG+
Sbjct: 153 -----------------------ENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGT 186
Query: 215 PNYVAPEVLA------NRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGD 268
P+Y+APE++ + GY G D+WS GVI+Y +L G PF R ++ + I G+
Sbjct: 187 PSYLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 269 FKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
++ P+W S ++L+ + L P KR T A +F+Q
Sbjct: 246 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 136/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE + +LFD I +G LQE R F Q+++ V
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 129 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 153
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 154 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 210 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
Query: 308 QDYTP 312
P
Sbjct: 264 DVLLP 268
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 125 HCHNXGVLHRDIKD-----------------------------------ENILIDLNRGE 149
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 150 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 206 GDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Query: 308 QDYTP 312
P
Sbjct: 260 DVLLP 264
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 42/291 (14%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
+ +Y + +GEG+FGK + + G + +K + +R+ K ++ +RE+A L +K
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMK 81
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRL-QEAEGRKLFQQLIDGVSYC 130
HPN+V+ E +Y+V++Y GG+LF +I A KG L QE + F Q+ + +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H++ + HRD+K +NI L G +++
Sbjct: 142 HDRKILHRDIKS-----------------------------------QNIFLTKDGTVQL 166
Query: 191 SDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYL 250
DFG++ + + L G+P Y++PE+ N+ Y+ SDIW+ G +LY + T
Sbjct: 167 GDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNN-KSDIWALGCVLYELCTLKH 223
Query: 251 PFDDRNLAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
F+ ++ L KI G F + S ++L+ ++ + NP R ++ I
Sbjct: 224 AFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 130 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 154
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 155 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 211 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
Query: 308 QDYTP 312
P
Sbjct: 265 DVLLP 269
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 130 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 154
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 155 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 211 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
Query: 308 QDYTP 312
P
Sbjct: 265 DVLLP 269
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 129 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 153
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 154 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 210 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
Query: 308 QDYTP 312
P
Sbjct: 264 DVLLP 268
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 125 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 149
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 150 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 206 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Query: 308 QDYTP 312
P
Sbjct: 260 DVLLP 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 172 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 196
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 197 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 253 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
Query: 308 QDYTP 312
P
Sbjct: 307 DVLLP 311
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 157 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 181
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 182 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 238 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
Query: 308 QDYTP 312
P
Sbjct: 292 DVLLP 296
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 130 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 154
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 155 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 211 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
Query: 308 QDYTP 312
P
Sbjct: 265 DVLLP 269
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 13 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 72
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 73 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 132
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 158
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 159 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ ++I RG + +S Q+L+R L P R
Sbjct: 214 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPXDRP 267
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 268 TFEEIQNHPWMQDVLLP 284
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 12 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 71
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 72 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 131
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 132 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 157
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 158 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 212
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ ++I RG + +S Q+L+R L P R
Sbjct: 213 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 266
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 267 TFEEIQNHPWMQDVLLP 283
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 128 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 152
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 153 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 208
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 209 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
Query: 308 QDYTP 312
P
Sbjct: 263 DVLLP 267
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 13 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 72
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 73 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 132
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 158
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 159 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ ++I RG + +S Q+L+R L P R
Sbjct: 214 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 267
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 268 TFEEIQNHPWMQDVLLP 284
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 172 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 196
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 197 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 253 GDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
Query: 308 QDYTP 312
P
Sbjct: 307 DVLLP 311
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 12 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 71
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 72 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 131
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 132 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 157
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 158 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 212
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ ++I RG + +S Q+L+R L P R
Sbjct: 213 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 266
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 267 TFEEIQNHPWMQDVLLP 283
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 152 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 176
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 177 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 232
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 233 GDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
Query: 308 QDYTP 312
P
Sbjct: 287 DVLLP 291
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 164 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 188
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 189 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 244
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 245 GDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
Query: 308 QDYTP 312
P
Sbjct: 299 DVLLP 303
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 13 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 72
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 73 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 132
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 158
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 159 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ ++I RG + +S Q+L+R L P R
Sbjct: 214 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRP 267
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 268 TFEEIQNHPWMQDVLLP 284
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 177 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 201
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 202 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 257
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ ++I RG + +S Q+L+R L P R T I+ W +
Sbjct: 258 GDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
Query: 308 QDYTP 312
P
Sbjct: 312 DVLLP 316
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 53/301 (17%)
Query: 16 YELGRT--LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
Y + +T LG G FG+V ++ +GL A KI+ K R +K +++K EI+ + L H
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKII-KTR--GMKDKEEVKNEISVMNQLDH 145
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDGVSYCHN 132
N+++L++ SK+ I +V+EYV GGELFD+I + L E + +Q+ +G+ + H
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL---DSKGNIK 189
+ H DLK ENIL D+K IK
Sbjct: 206 MYILHLDLKP-----------------------------------ENILCVNRDAK-QIK 229
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
I DFGL+ + ++ L G+P ++APEV+ N + +D+WS GVI Y++L+G
Sbjct: 230 IIDFGLA---RRYKPREKLKVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGL 285
Query: 250 LPFDDRNLAVLYQKIF--RGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
PF N A I R D + ++ +S A+ + K+L RI+ + W
Sbjct: 286 SPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPW 345
Query: 306 F 306
Sbjct: 346 L 346
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 26 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 85
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 86 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 145
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 171
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 172 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ + Q FR + +S Q+L+R L P R
Sbjct: 227 WSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------QRVSSECQHLIRWCLALRPSDRP 280
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 281 TFEEIQNHPWMQDVLLP 297
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 25 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 84
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 85 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 144
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 170
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 171 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ + Q FR + +S Q+L+R L P R
Sbjct: 226 WSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------QRVSSECQHLIRWCLALRPSDRP 279
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 280 TFEEIQNHPWMQDVLLP 296
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 140/297 (47%), Gaps = 47/297 (15%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
+ E + +E+ R +G+G+FGKV Q D+ +A+K + K + + + +E+
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ 67
Query: 67 TLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
++ L+HP +V L + ++MV++ + GG+L + +E + +L+
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA 127
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y N+ + HRD+K +NILLD G
Sbjct: 128 LDYLQNQRIIHRDMKP-----------------------------------DNILLDEHG 152
Query: 187 NIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANR---GYDGATSDIWSCGVIL 242
++ I+DF ++A LP+ + + T G+ Y+APE+ ++R GY A D WS GV
Sbjct: 153 HVHITDFNIAAMLPR----ETQITTMAGTKPYMAPEMFSSRKGAGYSFAV-DWWSLGVTA 207
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQ---NLLRKILEPNPVKRIT 296
Y +L G P+ R+ + + + + + S +Q +LL+K+LEPNP +R +
Sbjct: 208 YELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 26 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 85
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 86 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 145
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 171
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 172 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ + Q FR + +S Q+L+R L P R
Sbjct: 227 WSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------QRVSSECQHLIRWCLALRPSDRP 280
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 281 TFEEIQNHPWMQDVLLP 297
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 125 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 149
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 150 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ + Q FR + +S Q+L+R L P R T I+ W +
Sbjct: 206 GDIPFEHDEEIIGGQVFFR------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Query: 308 QDYTP 312
P
Sbjct: 260 DVLLP 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 25 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 84
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 85 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 144
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 170
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 171 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ + Q FR + +S Q+L+R L P R
Sbjct: 226 WSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------QRVSSECQHLIRWCLALRPSDRP 279
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 280 TFEEIQNHPWMQDVLLP 296
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 26 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 85
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 86 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 145
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 171
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 172 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ + Q FR + +S Q+L+R L P R
Sbjct: 227 WSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------QRVSXECQHLIRWCLALRPSDRP 280
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 281 TFEEIQNHPWMQDVLLP 297
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLL 71
+Y++G LG G FG V + LP A+K +EK+RI L ++ E+ LK +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 72 KH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
V+RL + ++LE +LFD I +G LQE R F Q+++ V
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-SKGN 187
+CHN GV HRD+K ENIL+D ++G
Sbjct: 157 HCHNCGVLHRDIKD-----------------------------------ENILIDLNRGE 181
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ DFG AL + D + G+ Y PE + Y G ++ +WS G++LY ++
Sbjct: 182 LKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
G +PF+ + Q FR + +S Q+L+R L P R T I+ W +
Sbjct: 238 GDIPFEHDEEIIGGQVFFR------QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
Query: 308 QDYTP 312
P
Sbjct: 292 DVLLP 296
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G FG V + LP A+K +EK+RI L
Sbjct: 26 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 85
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 86 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 145
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 171
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 172 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ + Q FR + +S Q+L+R L P R
Sbjct: 227 WSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------QRVSXECQHLIRWCLALRPSDRP 280
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 281 TFEEIQNHPWMQDVLLP 297
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH-PNVV 77
+ LG G F V+ +G +A K L+K R +I EIA L+L K P V+
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVI 92
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNKGV 135
LHEV + S+I ++LEY GGE+F + + E + +L +Q+++GV Y H +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS---KGNIKISD 192
H DLK +NILL S G+IKI D
Sbjct: 153 VHLDLKP-----------------------------------QNILLSSIYPLGDIKIVD 177
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT--SDIWSCGVILYVILTGYL 250
FG+S H + L G+P Y+APE+L YD T +D+W+ G+I Y++LT
Sbjct: 178 FGMSRKIGHACE---LREIMGTPEYLAPEIL---NYDPITTATDMWNIGIIAYMLLTHTS 231
Query: 251 PF--DDRNLAVLYQKIFRGDFKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWF 306
PF +D L D+ + +S A + ++ +L NP KR T + W
Sbjct: 232 PFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
Query: 307 EQ 308
+Q
Sbjct: 292 QQ 293
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 145/346 (41%), Gaps = 88/346 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRI--IHLKITDQIKREIATLKLLK 72
+Y L +G+G++G V+ A + + A+KI+ KN+I I+ K ++IK E+ +K L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIA-----SKGRL---------------- 111
HPN+ RL+EV + I +V+E GG L DK+ S G+
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 112 -------------------QEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIA 152
+E + +Q+ + Y HN+G+ HRD+K
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP---------- 196
Query: 153 TLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN--IKISDFGLSALPQHFRDDGL--L 208
EN L + + IK+ DFGLS + +
Sbjct: 197 -------------------------ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 209 HTTCGSPNYVAPEVL--ANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFR 266
T G+P +VAPEVL N Y G D WS GV+L+++L G +PF N A ++
Sbjct: 232 TTKAGTPYFVAPEVLNTTNESY-GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290
Query: 267 GD--FKLPKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQ 308
F+ P + LSP A++LL +L N +R W Q
Sbjct: 291 KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 140/325 (43%), Gaps = 54/325 (16%)
Query: 9 EGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIH-LKITD----QIKR 63
EG +Y LG G FG V A D + VK ++K +++ I D ++
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLE-YVTGGELFDKIASKGRLQEAEGRKLFQQ 122
EIA L ++H N++++ ++ ++ +V+E + +G +LF I RL E +F+Q
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
L+ V Y K + HRD+K ENI++
Sbjct: 139 LVSAVGYLRLKDIIHRDIKD-----------------------------------ENIVI 163
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
IK+ DFG +A + L +T CG+ Y APEVL Y G ++WS GV L
Sbjct: 164 AEDFTIKLIDFGSAA---YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
Y ++ PF + ++ P +S +L+ +L+P P +R T+ +
Sbjct: 221 YTLVFEENPFCE------LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274
Query: 303 DEWFEQDYTPAN-PDDDEEDIFVDN 326
D W Q P N D E++F N
Sbjct: 275 DPWVTQ---PVNLADYTWEEVFRVN 296
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 72
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 133 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 157
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 158 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 213
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 214 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 273
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 274 MNHPWIMQSTKVPQTP 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 118
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 179 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 203
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 204 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 259
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 260 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 320 MNHPWIMQSTKVPQTP 335
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 135 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 159
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 160 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 215
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 216 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 275
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 276 MNHPWIMQSTKVPQTP 291
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 73
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 134 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 158
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 159 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 214
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 215 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 274
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 275 MNHPWIMQSTKVPQTP 290
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 124
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 185 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 209
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 210 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 265
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 266 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 325
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 326 MNHPWIMQSTKVPQTP 341
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 78
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 139 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 163
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 164 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 219
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 220 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 279
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 280 MNHPWIMQSTKVPQTP 295
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 37 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 88
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 89 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 149 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 173
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 174 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 229
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 230 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 289
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 290 MNHPWIMQSTKVPQTP 305
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 79
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 140 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 164
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 165 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 220
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 221 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 280
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 281 MNHPWIMQSTKVPQTP 296
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 80
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 81 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 141 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 165
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 166 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 221
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 222 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 281
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 282 MNHPWIMQSTKVPQTP 297
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 143/322 (44%), Gaps = 78/322 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHPNVVRLH 80
LGEG + KV+ A L +G +AVKI+EK + H + ++ RE+ TL + + N++ L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEK-QAGHSR--SRVFREVETLYQCQGNKNILELI 77
Query: 81 EVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDL 140
E ++ Y+V E + GG + I + E E ++ + + + + H KG+ HRDL
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKISDFGL-- 195
K ENIL +S +KI DF L
Sbjct: 138 KP-----------------------------------ENILCESPEKVSPVKICDFDLGS 162
Query: 196 ------SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT-----SDIWSCGVILYV 244
S P + L T CGS Y+APEV+ D AT D+WS GV+LY+
Sbjct: 163 GMKLNNSCTPITTPE---LTTPCGSAEYMAPEVV-EVFTDQATFYDKRCDLWSLGVVLYI 218
Query: 245 ILTGYLPFD---------DRNLAV------LYQKIFRGDFKLP--KW--LSPGAQNLLRK 285
+L+GY PF DR L++ I G ++ P W +S A++L+ K
Sbjct: 219 MLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISK 278
Query: 286 ILEPNPVKRITIAGIKADEWFE 307
+L + +R++ A + W +
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 50/310 (16%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
M+ Y++ + +G G FG+V+ + S +A+K+L K +I + E +
Sbjct: 72 MKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 131
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
P VV+L +YMV+EY+ GG+L + + S + E + +++ +
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ G+ HRD+K +N+LLD G++K+
Sbjct: 191 HSMGLIHRDVKP-----------------------------------DNMLLDKHGHLKL 215
Query: 191 SDFGLSALPQHFRDDGLLH--TTCGSPNYVAPEVLANRG---YDGATSDIWSCGVILYVI 245
+DFG + G++H T G+P+Y++PEVL ++G Y G D WS GV L+ +
Sbjct: 216 ADFGTC---MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Query: 246 LTGYLPFDDRNLAVLYQKIF--RGDFKLPK--WLSPGAQNLLRKILEPNPVK--RITIAG 299
L G PF +L Y KI + P+ +S A+NL+ L V+ R +
Sbjct: 273 LVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEE 332
Query: 300 IKADEWFEQD 309
IK +F+ D
Sbjct: 333 IKQHPFFKND 342
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 50/310 (16%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
M+ YE+ + +G G FG+V+ + + +A+K+L K +I + E +
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
P VV+L +YMV+EY+ GG+L + + S + E R +++ +
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ G HRD+K +N+LLD G++K+
Sbjct: 185 HSMGFIHRDVKP-----------------------------------DNMLLDKSGHLKL 209
Query: 191 SDFGLSALPQHFRDDGLLH--TTCGSPNYVAPEVLANRG---YDGATSDIWSCGVILYVI 245
+DFG +G++ T G+P+Y++PEVL ++G Y G D WS GV LY +
Sbjct: 210 ADFGTC---MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 246 LTGYLPFDDRNLAVLYQKIF--RGDFKLP--KWLSPGAQNLLRKILEPNPVK--RITIAG 299
L G PF +L Y KI + P +S A+NL+ L V+ R +
Sbjct: 267 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE 326
Query: 300 IKADEWFEQD 309
IK +F+ D
Sbjct: 327 IKRHLFFKND 336
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 141/326 (43%), Gaps = 71/326 (21%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHPNVVRL 79
LGEG +V+ +L + +AVKI+EK I ++ RE+ L + H NV+ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
E + + Y+V E + GG + I + E E + Q + + + HNKG+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISDFGLS 196
LK ENIL + +KI DFGL
Sbjct: 137 LKP-----------------------------------ENILCEHPNQVSPVKICDFGLG 161
Query: 197 ALPQHFRDDGLLH-----TTCGSPNYVAPEVLANRGYDGAT----SDIWSCGVILYVILT 247
+ + D + T CGS Y+APEV+ + + D+WS GVILY++L+
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 248 GYLPFD---------DRNLA------VLYQKIFRGDFKLP--KW--LSPGAQNLLRKILE 288
GY PF DR A +L++ I G ++ P W +S A++L+ K+L
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 289 PNPVKRITIAGIKADEWFEQDYTPAN 314
+ +R++ A + W Q P N
Sbjct: 282 RDAKQRLSAAQVLQHPWV-QGCAPEN 306
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 135 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 159
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L T C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 160 KLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 215
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 216 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 275
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 276 MNHPWIMQSTKVPQTP 291
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 50/310 (16%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
M+ YE+ + +G G FG+V+ + + +A+K+L K +I + E +
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
P VV+L +YMV+EY+ GG+L + + S + E R +++ +
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ G HRD+K +N+LLD G++K+
Sbjct: 190 HSMGFIHRDVKP-----------------------------------DNMLLDKSGHLKL 214
Query: 191 SDFGLSALPQHFRDDGLLH--TTCGSPNYVAPEVLANRG---YDGATSDIWSCGVILYVI 245
+DFG +G++ T G+P+Y++PEVL ++G Y G D WS GV LY +
Sbjct: 215 ADFGTC---MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 246 LTGYLPFDDRNLAVLYQKIF--RGDFKLP--KWLSPGAQNLLRKILEPNPVK--RITIAG 299
L G PF +L Y KI + P +S A+NL+ L V+ R +
Sbjct: 272 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE 331
Query: 300 IKADEWFEQD 309
IK +F+ D
Sbjct: 332 IKRHLFFKND 341
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 50/310 (16%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
M+ YE+ + +G G FG+V+ + + +A+K+L K +I + E +
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
P VV+L +YMV+EY+ GG+L + + S + E R +++ +
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ G HRD+K +N+LLD G++K+
Sbjct: 190 HSMGFIHRDVKP-----------------------------------DNMLLDKSGHLKL 214
Query: 191 SDFGLSALPQHFRDDGLLH--TTCGSPNYVAPEVLANRG---YDGATSDIWSCGVILYVI 245
+DFG +G++ T G+P+Y++PEVL ++G Y G D WS GV LY +
Sbjct: 215 ADFGTC---MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 246 LTGYLPFDDRNLAVLYQKIF--RGDFKLP--KWLSPGAQNLLRKILEPNPVK--RITIAG 299
L G PF +L Y KI + P +S A+NL+ L V+ R +
Sbjct: 272 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE 331
Query: 300 IKADEWFEQD 309
IK +F+ D
Sbjct: 332 IKRHLFFKND 341
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 66/316 (20%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 72
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 133 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 157
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG + + L C +P YVAPEVL YD + D+WS GVI+Y++L G
Sbjct: 158 KLTDFGFA---KETTSHNSLTEPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCG 213
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 214 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 273
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 274 MNHPWIMQSTKVPQTP 289
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 3 IAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITD 59
+A K++ +Y++G LG G G V + LP A+K +EK+RI L
Sbjct: 40 LAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT 99
Query: 60 QIKREIATLKLLKH--PNVVRLHEVLASKSKIYMVLEYVTG-GELFDKIASKGRLQEAEG 116
++ E+ LK + V+RL + ++LE +LFD I +G LQE
Sbjct: 100 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 159
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
R F Q+++ V +CHN GV HRD+K
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKD---------------------------------- 185
Query: 177 LENILLD-SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDI 235
ENIL+D ++G +K+ DFG AL + D + G+ Y PE + Y G ++ +
Sbjct: 186 -ENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 236 WSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
WS G++LY ++ G +PF+ ++I RG + +S Q+L+R L P R
Sbjct: 241 WSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 294
Query: 296 TIAGIKADEWFEQDYTP 312
T I+ W + P
Sbjct: 295 TFEEIQNHPWMQDVLLP 311
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 71/326 (21%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHPNVVRL 79
LGEG +V+ +L + +AVKI+EK I ++ RE+ L + H NV+ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
E + + Y+V E + GG + I + E E + Q + + + HNKG+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN---IKISDFGLS 196
LK ENIL + +KI DF L
Sbjct: 137 LKP-----------------------------------ENILCEHPNQVSPVKICDFDLG 161
Query: 197 ALPQHFRDDGLLH-----TTCGSPNYVAPEVLANRGYDGAT----SDIWSCGVILYVILT 247
+ + D + T CGS Y+APEV+ + + D+WS GVILY++L+
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 248 GYLPFD---------DRNLA------VLYQKIFRGDFKLP--KW--LSPGAQNLLRKILE 288
GY PF DR A +L++ I G ++ P W +S A++L+ K+L
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 289 PNPVKRITIAGIKADEWFEQDYTPAN 314
+ +R++ A + W Q P N
Sbjct: 282 RDAKQRLSAAQVLQHPWV-QGCAPEN 306
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 52/295 (17%)
Query: 7 KQEGMRLGR--YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKRE 64
K + MRL R +E+ + +G G FG+V + ++ FA+KIL K ++ T + E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 65 IATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQL 123
L + LH + +Y+V++Y GG+L ++ + RL E R ++
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ + H HRD+K +NIL+D
Sbjct: 185 VIAIDSVHQLHYVHRDIKP-----------------------------------DNILMD 209
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTC--GSPNYVAPEVL----ANRGYDGATSDIWS 237
G+I+++DFG S L +DG + ++ G+P+Y++PE+L +G G D WS
Sbjct: 210 MNGHIRLADFG-SCL--KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 238 CGVILYVILTGYLPFDDRNLAVLYQKIF--RGDFKLPKW---LSPGAQNLLRKIL 287
GV +Y +L G PF +L Y KI + F+ P +S A++L+R+++
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLI 321
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 48/300 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYELG LG G +V A+DL AVK+L + + +RE L HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 75 NVVRLHEVLASKSKI----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+V +++ +++ Y+V+EYV G L D + ++G + ++ +++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H G+ HRD+K NIL+ + +K+
Sbjct: 133 HQNGIIHRDVKP-----------------------------------ANILISATNAVKV 157
Query: 191 SDFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
DFG++ A+ G+ Y++PE D A SD++S G +LY +LTG
Sbjct: 158 VDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGE 216
Query: 250 LPFD-DRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRI-TIAGIKAD 303
PF D ++V YQ + R D P + LS ++ K L NP R T A ++AD
Sbjct: 217 PPFTGDSPVSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 48/300 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYELG LG G +V A+DL AVK+L + + +RE L HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 75 NVVRLHEVLASKSKI----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+V +++ +++ Y+V+EYV G L D + ++G + ++ +++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H G+ HRD+K NI++ + +K+
Sbjct: 133 HQNGIIHRDVKP-----------------------------------ANIMISATNAVKV 157
Query: 191 SDFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
DFG++ A+ G+ Y++PE D A SD++S G +LY +LTG
Sbjct: 158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGE 216
Query: 250 LPFD-DRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRI-TIAGIKAD 303
PF D ++V YQ + R D P + LS ++ K L NP R T A ++AD
Sbjct: 217 PPFTGDSPVSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 58/293 (19%)
Query: 42 FAVKILEKNRIIHLKITDQIKREIA-TLKLLKHPNVVRLHEVL----ASKSKIYMVLEYV 96
F + EK + L+ + +RE+ + + P++VR+ +V A + + +V E +
Sbjct: 82 FNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECL 141
Query: 97 TGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATL 154
GGELF +I +G E E ++ + + + + Y H+ + HRD+K
Sbjct: 142 DGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKP------------ 189
Query: 155 QVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNIKISDFGLSALPQHFRDDGLLHTT 211
EN+L SK +K++DFG + + L T
Sbjct: 190 -----------------------ENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTP 223
Query: 212 CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF-DDRNLAV---LYQKIFRG 267
C +P YVAPEVL YD + D WS GVI Y++L GY PF + LA+ +I G
Sbjct: 224 CYTPYYVAPEVLGPEKYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXG 282
Query: 268 DFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY-TPANP 315
++ P+W +S + L+R +L+ P +R TI W Q P P
Sbjct: 283 QYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTP 335
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 46/296 (15%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L + + + +G G F +V A L G+P A+K ++ ++ K +EI LK L
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI----ASKGRLQEAEGRKLFQQLIDGVS 128
HPNV++ + +++ +VLE G+L I K + E K F QL +
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ H++ V HRD+K N+ + + G +
Sbjct: 151 HMHSRRVMHRDIKP-----------------------------------ANVFITATGVV 175
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K+ D GL H+ G+P Y++PE + GY+ SDIWS G +LY +
Sbjct: 176 KLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAAL 232
Query: 249 YLPF--DDRNLAVLYQKIFRGDF-KLPK-WLSPGAQNLLRKILEPNPVKRITIAGI 300
PF D NL L +KI + D+ LP S + L+ + P+P KR + +
Sbjct: 233 QSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 48/300 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYELG LG G +V A+DL AVK+L + + +RE L HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 75 NVVRLHEVLASKSKI----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+V +++ +++ Y+V+EYV G L D + ++G + ++ +++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H G+ HRD+K NI++ + +K+
Sbjct: 133 HQNGIIHRDVKP-----------------------------------ANIMISATNAVKV 157
Query: 191 SDFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
DFG++ A+ G+ Y++PE D A SD++S G +LY +LTG
Sbjct: 158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGE 216
Query: 250 LPFD-DRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRI-TIAGIKAD 303
PF D ++V YQ + R D P + LS ++ K L NP R T A ++AD
Sbjct: 217 PPFTGDSPVSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 48/300 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYELG LG G +V A+DL AVK+L + + +RE L HP
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 89
Query: 75 NVVRLHEVLASKSKI----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+V +++ +++ Y+V+EYV G L D + ++G + ++ +++
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 149
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H G+ HRD+K NI++ + +K+
Sbjct: 150 HQNGIIHRDVKP-----------------------------------ANIMISATNAVKV 174
Query: 191 SDFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
DFG++ A+ G+ Y++PE D A SD++S G +LY +LTG
Sbjct: 175 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGE 233
Query: 250 LPFD-DRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRI-TIAGIKAD 303
PF D ++V YQ + R D P + LS ++ K L NP R T A ++AD
Sbjct: 234 PPFTGDSPVSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 292
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 127/300 (42%), Gaps = 48/300 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYELG LG G +V A+DL AVK+L + + +RE L HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 75 NVVRLHEVLASKSKI----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+V +++ +++ Y+V+EYV G L D + ++G + ++ +++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H G+ HRD+K NI++ + +K+
Sbjct: 133 HQNGIIHRDVKPA-----------------------------------NIMISATNAVKV 157
Query: 191 SDFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
DFG++ A+ G+ Y++PE D A SD++S G +LY +LTG
Sbjct: 158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGE 216
Query: 250 LPFD-DRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRI-TIAGIKAD 303
PF D +V YQ + R D P + LS ++ K L NP R T A ++AD
Sbjct: 217 PPFTGDSPDSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYELG LG G +V A+DL AVK+L + + +RE L HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 75 NVVRLHEVLASKSKI----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
+V ++ +++ Y+V+EYV G L D + ++G + ++ +++
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H G+ HRD+K NI++ + +K+
Sbjct: 133 HQNGIIHRDVKP-----------------------------------ANIMISATNAVKV 157
Query: 191 SDFGLSALPQHFRDDG--LLHTTC--GSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
DFG++ + D G + T G+ Y++PE D A SD++S G +LY +L
Sbjct: 158 MDFGIA---RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVL 213
Query: 247 TGYLPFD-DRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRI-TIAGI 300
TG PF D ++V YQ + R D P + LS ++ K L NP R T A +
Sbjct: 214 TGEPPFTGDSPVSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 301 KAD 303
+AD
Sbjct: 273 RAD 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 59/301 (19%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLL 71
YE+ T+G G++G+ + + G KIL + + +T+ K+ E+ L+ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 72 KHPNVVRLHEVLASKSK--IYMVLEYVTGGELFDKIA--SKGR--LQEAEGRKLFQQLID 125
KHPN+VR ++ + ++ +Y+V+EY GG+L I +K R L E ++ QL
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 126 GVSYCHNKG-----VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
+ CH + V HRDLK N+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPA-----------------------------------NV 147
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
LD K N+K+ DFGL+ + H D T G+P Y++PE + Y+ SDIWS G
Sbjct: 148 FLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPEQMNRMSYN-EKSDIWSLGC 204
Query: 241 ILYVILTGYLPFDDRNLAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKRITIAG 299
+LY + PF + L KI G F ++P S ++ ++L R ++
Sbjct: 205 LLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEE 264
Query: 300 I 300
I
Sbjct: 265 I 265
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 180/423 (42%), Gaps = 71/423 (16%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
+ + + + R +G G FG+V + D+G +A+K L+K RI + E L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 71 LKH---PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
+ P +V + + K+ +L+ + GG+L ++ G EA+ R ++I G+
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ HN+ V +RDLK NILLD G+
Sbjct: 306 EHMHNRFVVYRDLKPA-----------------------------------NILLDEHGH 330
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++ISD GL+ + H + G+ Y+APEVL +++D +S G +L+ +L
Sbjct: 331 VRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 386
Query: 248 GYLPF---DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
G+ PF ++ + + +LP SP ++LL +L+ + +R+ G A E
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
Query: 305 WFEQDYTPANPDDDEEDIFVDNEAFSMHEVPSDGGRTPGSPPLINAFQLIGMSSCLDLSG 364
E + + +D + + + P PPLI + + D+ G
Sbjct: 447 VKESPFFRS----------LDWQMVFLQKYP---------PPLIPPRGEVNAADAFDI-G 486
Query: 365 FFEKEDVSERKIRFTSNHSAKD----LLERIEDIVTEMGF-RVQKKNGKLKATQEHKPQK 419
F++ED K+ + ++ + ER + V E F + + +L+A ++ K K
Sbjct: 487 SFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAK-NK 545
Query: 420 SLG 422
LG
Sbjct: 546 QLG 548
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 180/423 (42%), Gaps = 71/423 (16%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
+ + + + R +G G FG+V + D+G +A+K L+K RI + E L L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 71 LKH---PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
+ P +V + + K+ +L+ + GG+L ++ G EA+ R ++I G+
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ HN+ V +RDLK NILLD G+
Sbjct: 305 EHMHNRFVVYRDLKPA-----------------------------------NILLDEHGH 329
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++ISD GL+ + H + G+ Y+APEVL +++D +S G +L+ +L
Sbjct: 330 VRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 385
Query: 248 GYLPF---DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
G+ PF ++ + + +LP SP ++LL +L+ + +R+ G A E
Sbjct: 386 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 445
Query: 305 WFEQDYTPANPDDDEEDIFVDNEAFSMHEVPSDGGRTPGSPPLINAFQLIGMSSCLDLSG 364
E + + +D + + + P PPLI + + D+ G
Sbjct: 446 VKESPFFRS----------LDWQMVFLQKYP---------PPLIPPRGEVNAADAFDI-G 485
Query: 365 FFEKEDVSERKIRFTSNHSAKD----LLERIEDIVTEMGF-RVQKKNGKLKATQEHKPQK 419
F++ED K+ + ++ + ER + V E F + + +L+A ++ K K
Sbjct: 486 SFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAK-NK 544
Query: 420 SLG 422
LG
Sbjct: 545 QLG 547
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 52/288 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G+FG V A+ S + AVKIL + H + ++ RE+A +K L+HPN+V
Sbjct: 45 IGAGSFGTVHRAEWHGSDV--AVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID---GVSYCHNKG--VF 136
+ + +V EY++ G L+ + G ++ + R+ D G++Y HN+ +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HRDLK N+L+D K +K+ DFGLS
Sbjct: 162 HRDLKS-----------------------------------PNLLVDKKYTVKVCDFGLS 186
Query: 197 ALPQHFRDDGLLHT--TCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L + L + G+P ++APEVL + + SD++S GVIL+ + T P+ +
Sbjct: 187 RL----KASXFLXSKXAAGTPEWMAPEVLRDEPSN-EKSDVYSFGVILWELATLQQPWGN 241
Query: 255 RNLAVLYQKI-FRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
N A + + F+ ++P+ L+P ++ P KR + A I
Sbjct: 242 LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 156/367 (42%), Gaps = 65/367 (17%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
+ + + + R +G G FG+V + D+G +A+K L+K RI + E L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 71 LKH---PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
+ P +V + + K+ +L+ + GG+L ++ G EA+ R ++I G+
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ HN+ V +RDLK NILLD G+
Sbjct: 306 EHMHNRFVVYRDLKPA-----------------------------------NILLDEHGH 330
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++ISD GL+ + H + G+ Y+APEVL +++D +S G +L+ +L
Sbjct: 331 VRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 386
Query: 248 GYLPF---DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
G+ PF ++ + + +LP SP ++LL +L+ + +R+ G A E
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
Query: 305 WFEQDYTPANPDDDEEDIFVDNEAFSMHEVPSDGGRTPGSPPLINAFQLIGMSSCLDLSG 364
E + + +D + + + P PPLI + + D+ G
Sbjct: 447 VKESPFFRS----------LDWQMVFLQKYP---------PPLIPPRGEVNAADAFDI-G 486
Query: 365 FFEKEDV 371
F++ED
Sbjct: 487 SFDEEDT 493
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 156/367 (42%), Gaps = 65/367 (17%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
+ + + + R +G G FG+V + D+G +A+K L+K RI + E L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 71 LKH---PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
+ P +V + + K+ +L+ + GG+L ++ G EA+ R ++I G+
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ HN+ V +RDLK NILLD G+
Sbjct: 306 EHMHNRFVVYRDLKPA-----------------------------------NILLDEHGH 330
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++ISD GL+ + H + G+ Y+APEVL +++D +S G +L+ +L
Sbjct: 331 VRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 386
Query: 248 GYLPF---DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
G+ PF ++ + + +LP SP ++LL +L+ + +R+ G A E
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
Query: 305 WFEQDYTPANPDDDEEDIFVDNEAFSMHEVPSDGGRTPGSPPLINAFQLIGMSSCLDLSG 364
E + + +D + + + P PPLI + + D+ G
Sbjct: 447 VKESPFFRS----------LDWQMVFLQKYP---------PPLIPPRGEVNAADAFDI-G 486
Query: 365 FFEKEDV 371
F++ED
Sbjct: 487 SFDEEDT 493
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 58/299 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
LG+G +G V +DL + + A+K I E++ + + + EIA K LKH N+V+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 81 EVLASKSKIYMVLEYVTGGELFDKIASK-GRLQEAEGRKLF--QQLIDGVSYCHNKGVFH 137
+ I + +E V GG L + SK G L++ E F +Q+++G+ Y H+ + H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS-KGNIKISDFGLS 196
RD+K +N+L+++ G +KISDFG S
Sbjct: 146 RDIKG-----------------------------------DNVLINTYSGVLKISDFGTS 170
Query: 197 ALPQHFRDDGL---LHTTCGSPNYVAPEVL--ANRGYDGATSDIWSCGVILYVILTGYLP 251
R G+ T G+ Y+APE++ RGY G +DIWS G + + TG P
Sbjct: 171 K-----RLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGKPP 224
Query: 252 F---DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
F + A+ +F+ ++P+ +S A+ + K EP+P KR + DE+ +
Sbjct: 225 FYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 139/300 (46%), Gaps = 58/300 (19%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
LG+G +G V +DL + + A+K I E++ + + + EIA K LKH N+V+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQY 70
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASK-GRLQEAEGRKLF--QQLIDGVSYCHNKGVF 136
+ I + +E V GG L + SK G L++ E F +Q+++G+ Y H+ +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS-KGNIKISDFGL 195
HRD+K +N+L+++ G +KISDFG
Sbjct: 131 HRDIKG-----------------------------------DNVLINTYSGVLKISDFGT 155
Query: 196 SALPQHFRDDGL---LHTTCGSPNYVAPEVL--ANRGYDGATSDIWSCGVILYVILTGYL 250
S R G+ T G+ Y+APE++ RGY G +DIWS G + + TG
Sbjct: 156 SK-----RLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGKP 209
Query: 251 PF---DDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFE 307
PF + A+ +F+ ++P+ +S A+ + K EP+P KR + DE+ +
Sbjct: 210 PFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 59/301 (19%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLL 71
YE+ T+G G++G+ + + G KIL + + +T+ K+ E+ L+ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 72 KHPNVVRLHEVLASKSK--IYMVLEYVTGGELFDKI--ASKGR--LQEAEGRKLFQQLID 125
KHPN+VR ++ + ++ +Y+V+EY GG+L I +K R L E ++ QL
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 126 GVSYCHNKG-----VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
+ CH + V HRDLK N+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPA-----------------------------------NV 147
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
LD K N+K+ DFGL+ + H D+ G+P Y++PE + Y+ SDIWS G
Sbjct: 148 FLDGKQNVKLGDFGLARILNH--DEDFAKEFVGTPYYMSPEQMNRMSYN-EKSDIWSLGC 204
Query: 241 ILYVILTGYLPFDDRNLAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKRITIAG 299
+LY + PF + L KI G F ++P S ++ ++L R ++
Sbjct: 205 LLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEE 264
Query: 300 I 300
I
Sbjct: 265 I 265
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 133/303 (43%), Gaps = 54/303 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQI--KREIATLKLLK 72
+Y + LG G FG V + S + K ++ +K TDQ+ K+EI+ L + +
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK------VKGTDQVLVKKEISILNIAR 59
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCH 131
H N++ LHE S ++ M+ E+++G ++F++I S L E E Q+ + + + H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK--GNIK 189
+ + H D IRP ENI+ ++ IK
Sbjct: 120 SHNIGHFD---------------------------IRP--------ENIIYQTRRSSTIK 144
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
I +FG + + + LL T +P Y APEV + AT D+WS G ++YV+L+G
Sbjct: 145 IIEFGQARQLKPGDNFRLLFT---APEYYAPEVHQHDVVSTAT-DMWSLGTLVYVLLSGI 200
Query: 250 LPFDDRNLAVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
PF + + I ++ K +S A + + ++L R+T + W
Sbjct: 201 NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260
Query: 306 FEQ 308
+Q
Sbjct: 261 LKQ 263
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 52/288 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G+FG V A+ S + AVKIL + H + ++ RE+A +K L+HPN+V
Sbjct: 45 IGAGSFGTVHRAEWHGSDV--AVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID---GVSYCHNKG--VF 136
+ + +V EY++ G L+ + G ++ + R+ D G++Y HN+ +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HR+LK N+L+D K +K+ DFGLS
Sbjct: 162 HRNLKS-----------------------------------PNLLVDKKYTVKVCDFGLS 186
Query: 197 ALPQHFRDDGLLH--TTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L + L + G+P ++APEVL + + SD++S GVIL+ + T P+ +
Sbjct: 187 RL----KASTFLSSKSAAGTPEWMAPEVLRDEPSN-EKSDVYSFGVILWELATLQQPWGN 241
Query: 255 RNLAVLYQKI-FRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
N A + + F+ ++P+ L+P ++ P KR + A I
Sbjct: 242 LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 58/260 (22%)
Query: 74 PNVVRLHEVLAS----KSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGV 127
P++V + +V + K + +++E + GGELF +I +G E E ++ + + +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ + HRD+K EN+L SK
Sbjct: 123 QFLHSHNIAHRDVKP-----------------------------------ENLLYTSKEK 147
Query: 188 ---IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+K++DFG + L T C +P YVAPEVL YD + D+WS GVI+Y+
Sbjct: 148 DAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYI 202
Query: 245 ILTGYLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRIT 296
+L G+ PF + A+ + ++I G + P+W +S A+ L+R +L+ +P +R+T
Sbjct: 203 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT 262
Query: 297 IAGIKADEWFEQDY-TPANP 315
I W Q P P
Sbjct: 263 ITQFMNHPWINQSMVVPQTP 282
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 59/301 (19%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLL 71
YE+ T+G G++G+ + + G KIL + + +T+ K+ E+ L+ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 72 KHPNVVRLHEVLASKSK--IYMVLEYVTGGELFDKI--ASKGR--LQEAEGRKLFQQLID 125
KHPN+VR ++ + ++ +Y+V+EY GG+L I +K R L E ++ QL
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 126 GVSYCHNKG-----VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
+ CH + V HRDLK N+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPA-----------------------------------NV 147
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
LD K N+K+ DFGL+ + H D G+P Y++PE + Y+ SDIWS G
Sbjct: 148 FLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYN-EKSDIWSLGC 204
Query: 241 ILYVILTGYLPFDDRNLAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKRITIAG 299
+LY + PF + L KI G F ++P S ++ ++L R ++
Sbjct: 205 LLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEE 264
Query: 300 I 300
I
Sbjct: 265 I 265
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 58/260 (22%)
Query: 74 PNVVRLHEVLAS----KSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGV 127
P++V + +V + K + +++E + GGELF +I +G E E ++ + + +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ + HRD+K EN+L SK
Sbjct: 142 QFLHSHNIAHRDVKP-----------------------------------ENLLYTSKEK 166
Query: 188 ---IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+K++DFG + L T C +P YVAPEVL YD + D+WS GVI+Y+
Sbjct: 167 DAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYI 221
Query: 245 ILTGYLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRIT 296
+L G+ PF + A+ + ++I G + P+W +S A+ L+R +L+ +P +R+T
Sbjct: 222 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT 281
Query: 297 IAGIKADEWFEQDY-TPANP 315
I W Q P P
Sbjct: 282 ITQFMNHPWINQSMVVPQTP 301
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 52/291 (17%)
Query: 11 MRLGR--YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
M+L R +E+ + +G G FG+V + ++ +A+KIL K ++ T + E L
Sbjct: 69 MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL 128
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGV 127
+ LH ++ +Y+V++Y GG+L ++ + +L E R +++ +
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 188
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
H HRD+K +N+LLD G+
Sbjct: 189 DSIHQLHYVHRDIKP-----------------------------------DNVLLDVNGH 213
Query: 188 IKISDFGLSALPQHFRDDGLLHTTC--GSPNYVAPEVLA----NRGYDGATSDIWSCGVI 241
I+++DFG S L + DDG + ++ G+P+Y++PE+L G G D WS GV
Sbjct: 214 IRLADFG-SCLKMN--DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 270
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGD--FKLPKW---LSPGAQNLLRKIL 287
+Y +L G PF +L Y KI + F+ P +S A++L+++++
Sbjct: 271 MYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 52/291 (17%)
Query: 11 MRLGR--YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
M+L R +E+ + +G G FG+V + ++ +A+KIL K ++ T + E L
Sbjct: 85 MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL 144
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGV 127
+ LH ++ +Y+V++Y GG+L ++ + +L E R +++ +
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 204
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
H HRD+K +N+LLD G+
Sbjct: 205 DSIHQLHYVHRDIKP-----------------------------------DNVLLDVNGH 229
Query: 188 IKISDFGLSALPQHFRDDGLLHTTC--GSPNYVAPEVLA----NRGYDGATSDIWSCGVI 241
I+++DFG S L + DDG + ++ G+P+Y++PE+L G G D WS GV
Sbjct: 230 IRLADFG-SCLKMN--DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 286
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGD--FKLPKW---LSPGAQNLLRKIL 287
+Y +L G PF +L Y KI + F+ P +S A++L+++++
Sbjct: 287 MYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 82/331 (24%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKI--LEKNRIIHLKITDQIKREIATLKLLK 72
+Y +GEG +G V AQ+ + G FA+K LEK I REI+ LK LK
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE---DEGIPSTTIREISILKELK 58
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
H N+V+L++V+ +K ++ +V E++ +L D +G L+ + QL++G++YC
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H++ V HRDLK +N+L++ +G +KI
Sbjct: 117 HDRRVLHRDLKP-----------------------------------QNLLINREGELKI 141
Query: 191 SDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+DFGL+ +P ++ + Y AP+VL T DIWS G I ++
Sbjct: 142 ADFGLARAFGIPVRKYTHEIV-----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 248 GYLPFDDRNLAVLYQKIFR-----------GDFKLPKW------------------LSPG 278
G F + A +IFR +LPK+ L
Sbjct: 197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 279 AQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
+LL K+L+ +P +RIT +F+++
Sbjct: 257 GIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 50/294 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+ LG+G FGKV AQ+ ++ + A K+++ L + EI L HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL---EDYMVEIDILASCDHPN 95
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNKG 134
+V+L + ++ +++++E+ GG + + R L E++ + + +Q +D ++Y H+
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDLK NIL G+IK++DFG
Sbjct: 156 IIHRDLKA-----------------------------------GNILFTLDGDIKLADFG 180
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVL-----ANRGYDGATSDIWSCGVILYVILTGY 249
+SA ++ R + G+P ++APEV+ +R YD +D+WS G+ L +
Sbjct: 181 VSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIE 237
Query: 250 LPFDDRNLAVLYQKIFRGD---FKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
P + N + KI + + P S ++ L+K LE N R T + +
Sbjct: 238 PPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 82/331 (24%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKI--LEKNRIIHLKITDQIKREIATLKLLK 72
+Y +GEG +G V AQ+ + G FA+K LEK I REI+ LK LK
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE---DEGIPSTTIREISILKELK 58
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
H N+V+L++V+ +K ++ +V E++ +L D +G L+ + QL++G++YC
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H++ V HRDLK +N+L++ +G +KI
Sbjct: 117 HDRRVLHRDLKP-----------------------------------QNLLINREGELKI 141
Query: 191 SDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+DFGL+ +P ++ + Y AP+VL T DIWS G I ++
Sbjct: 142 ADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 248 GYLPFDDRNLAVLYQKIFR-----------GDFKLPKW------------------LSPG 278
G F + A +IFR +LPK+ L
Sbjct: 197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 279 AQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
+LL K+L+ +P +RIT +F+++
Sbjct: 257 GIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 50/294 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+ LG+G FGKV AQ+ ++ + A K+++ L + EI L HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL---EDYMVEIDILASCDHPN 95
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNKG 134
+V+L + ++ +++++E+ GG + + R L E++ + + +Q +D ++Y H+
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDLK NIL G+IK++DFG
Sbjct: 156 IIHRDLKA-----------------------------------GNILFTLDGDIKLADFG 180
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVL-----ANRGYDGATSDIWSCGVILYVILTGY 249
+SA ++ R + G+P ++APEV+ +R YD +D+WS G+ L +
Sbjct: 181 VSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIE 237
Query: 250 LPFDDRNLAVLYQKIFRGD---FKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
P + N + KI + + P S ++ L+K LE N R T + +
Sbjct: 238 PPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 82/331 (24%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKI--LEKNRIIHLKITDQIKREIATLKLLK 72
+Y +GEG +G V AQ+ + G FA+K LEK I REI+ LK LK
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE---DEGIPSTTIREISILKELK 58
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
H N+V+L++V+ +K ++ +V E++ +L D +G L+ + QL++G++YC
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H++ V HRDLK +N+L++ +G +KI
Sbjct: 117 HDRRVLHRDLKP-----------------------------------QNLLINREGELKI 141
Query: 191 SDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+DFGL+ +P ++ + Y AP+VL T DIWS G I ++
Sbjct: 142 ADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 248 GYLPFDDRNLAVLYQKIFR-----------GDFKLPKW------------------LSPG 278
G F + A +IFR +LPK+ L
Sbjct: 197 GAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 279 AQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
+LL K+L+ +P +RIT +F+++
Sbjct: 257 GIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 70/320 (21%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKI--LEKNRIIHLKITDQIKREIATLKLLKH 73
YEL +G G V+ A A+K LEK + D++ +EI + H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS----MDELLKEIQAMSQCHH 72
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFD---KIASKGR-----LQEAEGRKLFQQLID 125
PN+V + K ++++V++ ++GG + D I +KG L E+ + +++++
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 126 GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK 185
G+ Y H G HRD+K NILL
Sbjct: 133 GLEYLHKNGQIHRDVKA-----------------------------------GNILLGED 157
Query: 186 GNIKISDFGLSALPQHFRD---DGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVI 241
G+++I+DFG+SA D + + T G+P ++APEV+ RGYD +DIWS G+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD-FKADIWSFGIT 216
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQN--LLRK-----------ILE 288
+ TG P+ + + D P L G Q+ +L+K L+
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLTLQND---PPSLETGVQDKEMLKKYGKSFRKMISLCLQ 273
Query: 289 PNPVKRITIAGIKADEWFEQ 308
+P KR T A + ++F++
Sbjct: 274 KDPEKRPTAAELLRHKFFQK 293
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 51/281 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A++ SG AVK+++ + ++ + E+ ++ +H NVV +++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL---LFNEVVIMRDYQHFNVVEMYK 109
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++++E++ GG L D I S+ RL E + + + ++ ++Y H +GV HRD+K
Sbjct: 110 SYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 169 S-----------------------------------DSILLTLDGRVKLSDFGFCA--QI 191
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
+D G+P ++APEV++ Y DIWS G+++ ++ G P F D + +
Sbjct: 192 SKDVPKRKXLVGTPYWMAPEVISRSLY-ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM 250
Query: 261 YQKIFRGDFKLPKW-----LSPGAQNLLRKILEPNPVKRIT 296
K R D PK +SP ++ L ++L +P +R T
Sbjct: 251 --KRLR-DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT 288
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E+++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK EN+L++++G IK++DFGL+
Sbjct: 130 LKP-----------------------------------ENLLINTEGAIKLADFGLA--- 151
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 152 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 209 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 269 LHYDPNKRISAKAALAHPFF-QDVTKPVP 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E+++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 131
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK EN+L++++G IK++DFGL+
Sbjct: 132 LKP-----------------------------------ENLLINTEGAIKLADFGLA--- 153
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 154 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 271 LHYDPNKRISAKAALAHPFF-QDVTKPVP 298
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 50/294 (17%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+ LG+G FGKV AQ+ ++ + A K+++ L + EI L HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL---EDYMVEIDILASCDHPN 95
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNKG 134
+V+L + ++ +++++E+ GG + + R L E++ + + +Q +D ++Y H+
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDLK NIL G+IK++DFG
Sbjct: 156 IIHRDLKA-----------------------------------GNILFTLDGDIKLADFG 180
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVL-----ANRGYDGATSDIWSCGVILYVILTGY 249
+SA ++ R G+P ++APEV+ +R YD +D+WS G+ L +
Sbjct: 181 VSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIE 237
Query: 250 LPFDDRNLAVLYQKIFRGD---FKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
P + N + KI + + P S ++ L+K LE N R T + +
Sbjct: 238 PPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 70/320 (21%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKI--LEKNRIIHLKITDQIKREIATLKLLKH 73
YEL +G G V+ A A+K LEK + D++ +EI + H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS----MDELLKEIQAMSQCHH 67
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFD---KIASKGR-----LQEAEGRKLFQQLID 125
PN+V + K ++++V++ ++GG + D I +KG L E+ + +++++
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 126 GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK 185
G+ Y H G HRD+K NILL
Sbjct: 128 GLEYLHKNGQIHRDVKA-----------------------------------GNILLGED 152
Query: 186 GNIKISDFGLSALPQHFRD---DGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVI 241
G+++I+DFG+SA D + + T G+P ++APEV+ RGYD +DIWS G+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD-FKADIWSFGIT 211
Query: 242 LYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQN--LLRK-----------ILE 288
+ TG P+ + + D P L G Q+ +L+K L+
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLTLQND---PPSLETGVQDKEMLKKYGKSFRKMISLCLQ 268
Query: 289 PNPVKRITIAGIKADEWFEQ 308
+P KR T A + ++F++
Sbjct: 269 KDPEKRPTAAELLRHKFFQK 288
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 59/290 (20%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+Y +G+G G V A D+ +G A++ + + Q K+E+ ++L
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMR 73
Query: 72 --KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K+PN+V + ++++V+EY+ GG L D + ++ + E + + ++ + + +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRD+K +NILL G++K
Sbjct: 133 LHSNQVIHRDIKS-----------------------------------DNILLGMDGSVK 157
Query: 190 ISDFGLSA--LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++DFG A P+ + ++ G+P ++APEV+ + Y G DIWS G++ ++
Sbjct: 158 LTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIE 212
Query: 248 GYLPFDDRN-LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
G P+ + N L LY G +L P+ LS ++ L + LE + KR
Sbjct: 213 GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 55/288 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+Y +G+G G V A D+ +G A++ + + Q K+E+ ++L
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMR 72
Query: 72 --KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K+PN+V + ++++V+EY+ GG L D + ++ + E + + ++ + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRD+K +NILL G++K
Sbjct: 132 LHSNQVIHRDIKS-----------------------------------DNILLGMDGSVK 156
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
++DFG A Q + T G+P ++APEV+ + Y G DIWS G++ ++ G
Sbjct: 157 LTDFGFCA--QITPEQSKRSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGE 213
Query: 250 LPFDDRN-LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
P+ + N L LY G +L P+ LS ++ L + L+ + KR
Sbjct: 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 59/290 (20%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+Y +G+G G V A D+ +G A++ + + Q K+E+ ++L
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMR 72
Query: 72 --KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K+PN+V + ++++V+EY+ GG L D + ++ + E + + ++ + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRD+K +NILL G++K
Sbjct: 132 LHSNQVIHRDIKS-----------------------------------DNILLGMDGSVK 156
Query: 190 ISDFGLSA--LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++DFG A P+ + ++ G+P ++APEV+ + Y G DIWS G++ ++
Sbjct: 157 LTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIE 211
Query: 248 GYLPFDDRN-LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
G P+ + N L LY G +L P+ LS ++ L + LE + KR
Sbjct: 212 GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 261
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 55/288 (19%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+Y +G+G G V A D+ +G A++ + + Q K+E+ ++L
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMR 73
Query: 72 --KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K+PN+V + ++++V+EY+ GG L D + ++ + E + + ++ + + +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HR++K +NILL G++K
Sbjct: 133 LHSNQVIHRNIKS-----------------------------------DNILLGMDGSVK 157
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGY 249
++DFG A Q + T G+P ++APEV+ + Y G DIWS G++ ++ G
Sbjct: 158 LTDFGFCA--QITPEQSKRSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGE 214
Query: 250 LPFDDRN-LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
P+ + N L LY G +L P+ LS ++ L + LE + KR
Sbjct: 215 PPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK EN+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------ENLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E+++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 72 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 131 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 152
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 153 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 210 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 270 LHYDPNKRISAKAALAHPFF-QDVTKPVP 297
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E+++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 131
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 132 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 153
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 154 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 271 LHYDPNKRISAKAALAHPFF-QDVTKPVP 298
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+S+CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLSFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK EN+L++++G IK++DFGL+
Sbjct: 130 LKP-----------------------------------ENLLINTEGAIKLADFGLA--- 151
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 152 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 209 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 269 LHYDPNKRISAKAALAHPFF-QDVTKPVP 296
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK EN+L++++G IK++DFGL+
Sbjct: 131 LKP-----------------------------------ENLLINTEGAIKLADFGLA--- 152
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 153 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 210 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 270 LHYDPNKRISAKAALAHPFF-QDVTKPVP 297
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 76
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 135
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 136 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 157
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 158 ---RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 215 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 274
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 275 LHYDPNKRISAKAALAHPFF-QDVTKPVP 302
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E+V + D A G LF QL+ G+++CH+ V HRD
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 131
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 132 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 153
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 154 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 271 LHYDPNKRISAKAALAHPFF-QDVTKPVP 298
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKIL-----EKNRIIHLKITDQIKREIATLK 69
R + R L EG F V AQD+ SG +A+K L EKNR I I+ K
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI-------IQEVCFMKK 81
Query: 70 LLKHPNVVRL--------HEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKL 119
L HPN+V+ E +++ ++ E G E K+ S+G L K+
Sbjct: 82 LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141
Query: 120 FQQLIDGVSYCHNKG--VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQL 177
F Q V + H + + HRDLKV
Sbjct: 142 FYQTCRAVQHMHRQKPPIIHRDLKV----------------------------------- 166
Query: 178 ENILLDSKGNIKISDFGLSALPQHFRD-------DGLLH---TTCGSPNYVAPEV--LAN 225
EN+LL ++G IK+ DFG + H+ D L+ T +P Y PE+ L +
Sbjct: 167 ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226
Query: 226 RGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGA--QNLL 283
G DIW+ G ILY++ PF+D A L +I G + +P + +L+
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFRQHPFEDG--AKL--RIVNGKYSIPPHDTQYTVFHSLI 282
Query: 284 RKILEPNPVKRITIAGI 300
R +L+ NP +R++IA +
Sbjct: 283 RAMLQVNPEERLSIAEV 299
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 141/329 (42%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E+V D A G LF QL+ G+++CH+ V HRD
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 127
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 128 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 149
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 150 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 207 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 267 LHYDPNKRISAKAALAHPFF-QDVTKPVP 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 127
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 128 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 149
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 150 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 207 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 267 LHYDPNKRISAKAALAHPFF-QDVTKPVP 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 76
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 135
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 136 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 157
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 158 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 215 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 274
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 275 LHYDPNKRISAKAALAHPFF-QDVTKPVP 302
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 59/290 (20%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+Y +G+G G V A D+ +G A++ + + Q K+E+ ++L
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMR 72
Query: 72 --KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
K+PN+V + ++++V+EY+ GG L D + ++ + E + + ++ + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRD+K +NILL G++K
Sbjct: 132 LHSNQVIHRDIKS-----------------------------------DNILLGMDGSVK 156
Query: 190 ISDFGLSA--LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
++DFG A P+ + ++ G+P ++APEV+ + Y G DIWS G++ ++
Sbjct: 157 LTDFGFCAQITPEQSKRSEMV----GTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIE 211
Query: 248 GYLPFDDRN-LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
G P+ + N L LY G +L P+ LS ++ L + L+ + KR
Sbjct: 212 GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 73
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 132
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 133 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 154
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 155 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 212 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 271
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 272 LHYDPNKRISAKAALAHPFF-QDVTKPVP 299
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 42/231 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A + +G AVK ++ + + + + E+ ++ H NVV ++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +SY HN+GV HRD+K
Sbjct: 110 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL S G IK+SDFG A Q
Sbjct: 169 S-----------------------------------DSILLTSDGRIKLSDFGFCA--QV 191
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
++ G+P ++APEV++ Y G DIWS G+++ ++ G P+
Sbjct: 192 SKEVPKRKXLVGTPYWMAPEVISRLPY-GTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 130 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 151
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 152 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 209 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 269 LHYDPNKRISAKAALAHPFF-QDVTKPVP 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 127
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 128 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 149
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 150 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 207 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 267 LHYDPNKRISAKAALAHPFF-QDVTKPVP 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 130 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 151
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 152 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 209 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 269 LHYDPNKRISAKAALAHPFF-QDVTKPVP 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 127
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 128 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 149
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 150 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 207 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 267 LHYDPNKRISAKAALAHPFF-QDVTKPVP 294
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 127
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 128 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 149
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 150 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 207 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 267 LHYDPNKRISAKAALAHPFF-QDVTKPVP 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 131
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 132 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 153
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 154 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 271 LHYDPNKRISAKAALAHPFF-QDVTKPVP 298
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 131 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 152
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 153 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 210 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 270 LHYDPNKRISAKAALAHPFF-QDVTKPVP 297
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 268 LHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 45/291 (15%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG+G FG+V Q +G +A K LEK RI K E L+ + VV L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF--QQLIDGVSYCHNKGVFH 137
+K + +VL + GG+L I G+ E R +F ++ G+ H + + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDLK ENILLD G+I+ISD GL+
Sbjct: 310 RDLKP-----------------------------------ENILLDDHGHIRISDLGLAV 334
Query: 198 LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNL 257
H + + G+ Y+APEV+ N Y + D W+ G +LY ++ G PF R
Sbjct: 335 ---HVPEGQTIKGRVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKK 390
Query: 258 AVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
+ +++ R ++P + SP A++L ++L +P +R+ G A E
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 130 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 151
Query: 200 QHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 152 ---RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 209 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 269 LHYDPNKRISAKAALAHPFF-QDVTKPVP 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 73
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 132
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 133 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 154
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 155 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 212 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 271
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 272 LHYDPNKRISAKAALAHPFF-QDVTKPVP 299
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 131
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 132 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 153
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 154 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 271 LHYDPNKRISAKAALAHPFF-QDVTKPVP 298
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 142/345 (41%), Gaps = 87/345 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V + D+ SGL AVK L + IIH K T RE+ LK +K
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 108
Query: 73 HPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 166
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 167 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 191
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 192 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELL 246
Query: 247 TGYLPFDDRNLAVLYQKIFRGDFKLPKWL------------------------------- 275
TG F + Q+I R P +
Sbjct: 247 TGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGA 306
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPANPDDDEE 320
+P A +LL K+L + KRIT + A +F Q + +PDD+ E
Sbjct: 307 NPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYH---DPDDEPE 348
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 131 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 152
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 153 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 210 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 270 LHYDPNKRISAKAALAHPFF-QDVTKPVP 297
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 45/291 (15%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG+G FG+V Q +G +A K LEK RI K E L+ + VV L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF--QQLIDGVSYCHNKGVFH 137
+K + +VL + GG+L I G+ E R +F ++ G+ H + + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDLK ENILLD G+I+ISD GL+
Sbjct: 310 RDLKP-----------------------------------ENILLDDHGHIRISDLGLAV 334
Query: 198 LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNL 257
H + + G+ Y+APEV+ N Y + D W+ G +LY ++ G PF R
Sbjct: 335 ---HVPEGQTIKGRVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKK 390
Query: 258 AVLYQKIFRGDFKLP----KWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
+ +++ R ++P + SP A++L ++L +P +R+ G A E
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 79/329 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ D A G LF QL+ G+++CH+ V HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 131
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 132 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 153
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 154 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 287 LEPNPVKRITIAGIKADEWFEQDYTPANP 315
L +P KRI+ A +F QD T P
Sbjct: 271 LHYDPNKRISAKAALAHPFF-QDVTKPVP 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 139/321 (43%), Gaps = 78/321 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG +G V A++ +G A+K + + + REI+ LK L HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 82 VLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
LK +N+L++++G IK++DFGL+
Sbjct: 129 LKP-----------------------------------QNLLINTEGAIKLADFGLA--- 150
Query: 200 QHFRDDGLLHTT----CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLPFD 253
R G+ T + Y APE+L Y DIWS G I ++T P D
Sbjct: 151 ---RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
Query: 254 D---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLRKI 286
R L + ++ G D+K PKW L ++LL ++
Sbjct: 208 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 287 LEPNPVKRITIAGIKADEWFE 307
L +P KRI+ A +F+
Sbjct: 268 LHYDPNKRISAKAALAHPFFQ 288
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 51/246 (20%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKIL-----EKNRIIHLKITDQIKREIATLK 69
RY++ LG G V A+D + A+K + EK + + +RE+
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK-----RFEREVHNSS 66
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
L H N+V + +V Y+V+EY+ G L + I S G L Q++DG+ +
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ + HRD+K P +NIL+DS +K
Sbjct: 127 AHDMRIVHRDIK---------------------------P--------QNILIDSNKTLK 151
Query: 190 ISDFGLSALPQHFRDDGLLHTT--CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
I DFG++ + + L T G+ Y +PE D T DI+S G++LY +L
Sbjct: 152 IFDFGIA---KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT-DIYSIGIVLYEMLV 207
Query: 248 GYLPFD 253
G PF+
Sbjct: 208 GEPPFN 213
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 136/347 (39%), Gaps = 103/347 (29%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK----------ITDQIK 62
+ +YE +GEG +G V F K E + I+ LK +
Sbjct: 1 MQKYEKLEKIGEGTYGTV-----------FKAKNRETHEIVALKRVRLDDDDEGVPSSAL 49
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLF 120
REI LK LKH N+VRLH+VL S K+ +V E+ + FD + G L +
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFL 107
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
QL+ G+ +CH++ V HRDLK +N+
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKP-----------------------------------QNL 132
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPN-----YVAPEVLANRGYDGATSDI 235
L++ G +K++DFGL+ R G + C S Y P+VL + D+
Sbjct: 133 LINRNGELKLADFGLA------RAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 236 WSCGVILYVILTGYLP-FDDRNLAVLYQKIFR-----------GDFKLPKW--------- 274
WS G I + P F ++ ++IFR KLP +
Sbjct: 186 WSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Query: 275 ---------LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
L+ ++LL+ +L+ NPV+RI+ +F D+ P
Sbjct: 246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF-SDFCP 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 142/331 (42%), Gaps = 83/331 (25%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLKLLKHPNVVRL 79
+GEG +G V A++ +G V L K R+ + REI+ LK L HPN+V+L
Sbjct: 11 IGEGTYGVVYKARNKLTG---EVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 80 HEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
+V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V H
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLH 126
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDLK +N+L++++G IK++DFGL+
Sbjct: 127 RDLKP-----------------------------------QNLLINTEGAIKLADFGLA- 150
Query: 198 LPQHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLP 251
R G+ T + Y APE+L Y DIWS G I ++T P
Sbjct: 151 -----RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 252 FDD---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLR 284
D R L + ++ G D+K PKW L ++LL
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLS 265
Query: 285 KILEPNPVKRITIAGIKADEWFEQDYTPANP 315
++L +P KRI+ A +F QD T P
Sbjct: 266 QMLHYDPNKRISAKAALAHPFF-QDVTKPVP 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 142/331 (42%), Gaps = 83/331 (25%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLKLLKHPNVVRL 79
+GEG +G V A++ +G V L K R+ + REI+ LK L HPN+V+L
Sbjct: 10 IGEGTYGVVYKARNKLTG---EVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 80 HEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
+V+ +++K+Y+V E++ + D A G LF QL+ G+++CH+ V H
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCHSHRVLH 125
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDLK +N+L++++G IK++DFGL+
Sbjct: 126 RDLKP-----------------------------------QNLLINTEGAIKLADFGLA- 149
Query: 198 LPQHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT--GYLP 251
R G+ T + Y APE+L Y DIWS G I ++T P
Sbjct: 150 -----RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 252 FDD---------RNLAVLYQKIFRG-----DFK--LPKW-----------LSPGAQNLLR 284
D R L + ++ G D+K PKW L ++LL
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLS 264
Query: 285 KILEPNPVKRITIAGIKADEWFEQDYTPANP 315
++L +P KRI+ A +F QD T P
Sbjct: 265 QMLHYDPNKRISAKAALAHPFF-QDVTKPVP 294
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKSQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDS 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLC---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSLESRDLLID 335
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPQDQSFESRDLLID 335
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPTDQSFESRDLLID 335
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 85
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 144 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDS 168
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 169 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 341
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDX 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 81
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 140 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDS 164
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 165 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 337
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L K IIH K T RE+ LK +K
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT---YRELRLLKHMK 91
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 150 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 174
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 175 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 230 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 289
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 290 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 347
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A SG AVK ++ + + + + E+ ++ +H NVV ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +S H +GV HRD+K
Sbjct: 96 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 155 S-----------------------------------DSILLTHDGRVKLSDFGFCA--QV 177
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
++ G+P ++APE+++ Y G DIWS G+++ ++ G P F++ L +
Sbjct: 178 SKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 236
Query: 261 YQKIFRGDFKLPKWL------SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
K+ R + LP L SP + L ++L +P +R T A + + + PA+
Sbjct: 237 --KMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 292
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 56/301 (18%)
Query: 13 LGRYELGRTLGE-GNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
L + +GE G+FGKV AQ+ ++ + A K+++ L + EI L
Sbjct: 8 LNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL---EDYMVEIDILASC 64
Query: 72 KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYC 130
HPN+V+L + ++ +++++E+ GG + + R L E++ + + +Q +D ++Y
Sbjct: 65 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 124
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ + HRDLK NIL G+IK+
Sbjct: 125 HDNKIIHRDLKA-----------------------------------GNILFTLDGDIKL 149
Query: 191 SDFGLSALPQHF---RDDGLLHTTCGSPNYVAPEVLA-----NRGYDGATSDIWSCGVIL 242
+DFG+SA R D + G+P ++APEV+ +R YD +D+WS G+ L
Sbjct: 150 ADFGVSAKNTRTXIQRRDSFI----GTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITL 204
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD---FKLPKWLSPGAQNLLRKILEPNPVKRITIAG 299
+ P + N + KI + + P S ++ L+K LE N R T +
Sbjct: 205 IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQ 264
Query: 300 I 300
+
Sbjct: 265 L 265
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A SG AVK ++ + + + + E+ ++ +H NVV ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +S H +GV HRD+K
Sbjct: 94 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 153 S-----------------------------------DSILLTHDGRVKLSDFGFCA--QV 175
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
++ G+P ++APE+++ Y G DIWS G+++ ++ G P F++ L +
Sbjct: 176 SKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 234
Query: 261 YQKIFRGDFKLPKWL------SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
K+ R + LP L SP + L ++L +P +R T A + + + PA+
Sbjct: 235 --KMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 290
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPRDQSFESRDLLID 335
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A SG AVK ++ + ++ + E+ ++ +H NVV ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 215
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +S H +GV HRD+K
Sbjct: 216 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 275 S-----------------------------------DSILLTHDGRVKLSDFGFCA--QV 297
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
++ G+P ++APE+++ Y G DIWS G+++ ++ G P F++ L +
Sbjct: 298 SKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 356
Query: 261 YQKIFRGDFKLPKWL------SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
K+ R + LP L SP + L ++L +P +R T A + + + PA+
Sbjct: 357 --KMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 412
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 145 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 169
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 170 ELKILDFGLA---RHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSLESRDLLID 342
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 66/252 (26%)
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDK--IASKGRLQEAEGRK 118
REI+ +K LKH N+VRL++V+ +++K+ +V E++ + D + + R E K
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 119 LFQ-QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQL 177
FQ QL+ G+++CH + HRDLK
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKP----------------------------------- 136
Query: 178 ENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP----NYVAPEVLANRGYDGATS 233
+N+L++ +G +K+ DFGL+ R G+ T S Y AP+VL +
Sbjct: 137 QNLLINKRGQLKLGDFGLA------RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 234 DIWSCGVILYVILTGYLPF----DDRNLAVLY-------QKIFRGDFKLPKWLSPGAQNL 282
DIWSCG IL ++TG F D+ L +++ + ++ KLPK+ +P Q
Sbjct: 191 DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY-NPNIQQR 249
Query: 283 ----LRKILEPN 290
LR++L+P+
Sbjct: 250 PPRDLRQVLQPH 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A SG AVK ++ + + + + E+ ++ +H NVV ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +S H +GV HRD+K
Sbjct: 139 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 198 S-----------------------------------DSILLTHDGRVKLSDFGFCA--QV 220
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
++ G+P ++APE+++ Y G DIWS G+++ ++ G P F++ L +
Sbjct: 221 SKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 279
Query: 261 YQKIFRGDFKLPKWL------SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
K+ R + LP L SP + L ++L +P +R T A + + + PA+
Sbjct: 280 --KMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 335
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A SG AVK ++ + + + + E+ ++ +H NVV ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +S H +GV HRD+K
Sbjct: 85 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 144 S-----------------------------------DSILLTHDGRVKLSDFGFCA--QV 166
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
++ G+P ++APE+++ Y G DIWS G+++ ++ G P F++ L +
Sbjct: 167 SKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 225
Query: 261 YQKIFRGDFKLPKWL------SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
K+ R + LP L SP + L ++L +P +R T A + + + PA+
Sbjct: 226 --KMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 281
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 145 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 169
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 170 ELKILDFGLA---RHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSSESRDLLID 342
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 145 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 169
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 170 ELKILDFGLA---RHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 342
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+GEG+ G V A SG AVK ++ + + + + E+ ++ +H NVV ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
++++V+E++ GG L D I + R+ E + + ++ +S H +GV HRD+K
Sbjct: 89 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
++ILL G +K+SDFG A Q
Sbjct: 148 S-----------------------------------DSILLTHDGRVKLSDFGFCA--QV 170
Query: 202 FRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLP-FDDRNLAVL 260
++ G+P ++APE+++ Y G DIWS G+++ ++ G P F++ L +
Sbjct: 171 SKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 229
Query: 261 YQKIFRGDFKLPKWL------SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
K+ R + LP L SP + L ++L +P +R T A + + + PA+
Sbjct: 230 --KMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 285
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 84
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 143 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDX 167
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 168 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 340
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 102
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 160
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 161 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 185
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 186 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 241 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 300
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 301 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 358
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 85
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 144 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 168
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 169 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 341
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 102
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 160
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 161 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 185
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 186 ELKILDFGLA---RHTDDE--MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 241 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 300
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 301 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 358
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 81
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 140 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 164
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 165 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 337
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 145 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 169
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 170 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 342
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 84
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 143 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 167
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 168 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 340
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 91
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 150 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 174
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 175 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 230 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 289
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 290 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 347
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 91
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 150 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 174
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 175 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 230 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 289
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 290 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 347
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 99
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 157
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 158 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 182
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 183 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 238 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 297
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 298 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 355
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 81
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 140 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 164
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 165 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 337
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 84
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 143 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDX 167
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 168 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 340
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 90
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 148
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 149 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 173
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 174 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 229 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 288
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 289 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 346
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 85
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 144 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 168
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 169 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 341
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 134/324 (41%), Gaps = 60/324 (18%)
Query: 11 MRLGRYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
M L ++E+ RT LG G FG+V L AVK L+++ + ++ +
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLK 56
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF--- 120
E A +K +KHPN+V+L V + Y++ E++T G L D + R QE L
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 115
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
Q+ + Y K HRDL N
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAA-----------------------------------RNC 140
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCG 239
L+ +K++DFGLS L D H P + APE LA + SD+W+ G
Sbjct: 141 LVGENHLVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFG 197
Query: 240 VILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRIT 296
V+L+ I T G P+ + + +Y+ + D+++ P+ L+R + NP R +
Sbjct: 198 VLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 256
Query: 297 IAGIKADEWFEQDYTPANPDDDEE 320
A I FE + ++ D+ E
Sbjct: 257 FAEIHQA--FETMFQESSISDEVE 278
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 81
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 140 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 164
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 165 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 337
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 76
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 135 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 159
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 160 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 215 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 274
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 275 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 332
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 90
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 148
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 149 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDX 173
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 174 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 229 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 288
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 289 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 346
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 84
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 143 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 167
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 168 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 340
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 78
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 136
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 137 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 161
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 162 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 216
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 217 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 276
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 277 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 334
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 98
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 156
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 157 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 181
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 182 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 237 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 296
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 297 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 354
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 76
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 135 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 159
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 160 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 215 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 274
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 275 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 332
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 54/296 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+ LG+G FGKV A++ ++G A K++E ++ D I EI L HP
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIV-EIEILATCDHPY 77
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNKG 134
+V+L K+++++E+ GG + + R L E + + + +Q+++ +++ H+K
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDLK N+L+ +G+I+++DFG
Sbjct: 138 IIHRDLKA-----------------------------------GNVLMTLEGDIRLADFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEV-----LANRGYDGATSDIWSCGVILYVILTGY 249
+SA ++ + + G+P ++APEV + + YD +DIWS G+ L +
Sbjct: 163 VSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIE 219
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGA-----QNLLRKILEPNPVKRITIAGI 300
P + N + KI + D P L+P ++ L+ L+ NP R + A +
Sbjct: 220 PPHHELNPMRVLLKIAKSD--PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 273
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPFDQSFESRDLLID 335
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 54/294 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E+ LG+G FGKV A++ ++G A K++E ++ D I EI L HP
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYI-VEIEILATCDHPY 69
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNKG 134
+V+L K+++++E+ GG + + R L E + + + +Q+++ +++ H+K
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDLK N+L+ +G+I+++DFG
Sbjct: 130 IIHRDLKA-----------------------------------GNVLMTLEGDIRLADFG 154
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEV-----LANRGYDGATSDIWSCGVILYVILTGY 249
+SA ++ + + G+P ++APEV + + YD +DIWS G+ L +
Sbjct: 155 VSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIE 211
Query: 250 LPFDDRNLAVLYQKIFRGDFKLPKWLSPGA-----QNLLRKILEPNPVKRITIA 298
P + N + KI + D P L+P ++ L+ L+ NP R + A
Sbjct: 212 PPHHELNPMRVLLKIAKSD--PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 263
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 77
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 135
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 136 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 160
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 161 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 216 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 275
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 276 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 333
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 134 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 158
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 159 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 273
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 331
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 63
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y+++E++T G L D + R QE L Q+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 122
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 123 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 147
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 148 NHLVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 204
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 205 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 136/347 (39%), Gaps = 103/347 (29%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK----------ITDQIK 62
+ +YE +GEG +G V F K E + I+ LK +
Sbjct: 1 MQKYEKLEKIGEGTYGTV-----------FKAKNRETHEIVALKRVRLDDDDEGVPSSAL 49
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLF 120
REI LK LKH N+VRLH+VL S K+ +V E+ + FD + G L +
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFL 107
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
QL+ G+ +CH++ V HRDLK +N+
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKP-----------------------------------QNL 132
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPN-----YVAPEVLANRGYDGATSDI 235
L++ G +K+++FGL+ R G + C S Y P+VL + D+
Sbjct: 133 LINRNGELKLANFGLA------RAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 236 WSCGVILYVILTGYLP-FDDRNLAVLYQKIFR-----------GDFKLPKW--------- 274
WS G I + P F ++ ++IFR KLP +
Sbjct: 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Query: 275 ---------LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP 312
L+ ++LL+ +L+ NPV+RI+ +F D+ P
Sbjct: 246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF-SDFCP 291
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 67
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y+++E++T G L D + R QE L Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 126
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 127 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 151
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 152 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 208
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 209 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 151/358 (42%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI D+GL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDYGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 60/320 (18%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 62
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y+++E++T G L D + R QE L Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 122 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 147 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 203
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 204 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Query: 301 KADEWFEQDYTPANPDDDEE 320
FE + ++ D+ E
Sbjct: 263 HQA--FETMFQESSISDEVE 280
>pdb|2EHB|D Chain D, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 143
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 345 PPLINAFQLIGMSSCLDLSGFFEK-EDVSERKIRFTSNHSAKDLLERIEDIVTEMGFRVQ 403
P ++NAF++I +S L+LS F++ +D +R+ RF S +++ IE + MGF+
Sbjct: 4 PLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSH 63
Query: 404 KKNGKLKATQEHKPQKSLGSLSVAAEVFEISPSLYVVELRKSYGDP----TVYRQLCNKL 459
+N K E G L+V E++E++PSL++V++RK+ G+ Y++LC+KL
Sbjct: 64 TRN--FKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKL 121
Query: 460 SSDL-----GLPPSQEL 471
+ + G+P S+ L
Sbjct: 122 ENIIWRATEGIPKSEIL 138
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 48/241 (19%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIK-REIATLKL 70
+ +YE +GEG++G V ++ D+G A+K LE + K+ +I REI LK
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD---KMVKKIAMREIKLLKQ 80
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L+H N+V L EV K + Y+V E+V L D L +K Q+I+G+ +C
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ + HRD+K ENIL+ G +K+
Sbjct: 141 HSHNIIHRDIKP-----------------------------------ENILVSQSGVVKL 165
Query: 191 SDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFG + A P DD + + Y APE+L G D+W+ G ++ +
Sbjct: 166 CDFGFARTLAAPGEVYDDEV-----ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM 220
Query: 248 G 248
G
Sbjct: 221 G 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 60/320 (18%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 62
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y+++E++T G L D + R QE L Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 122 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 147 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 203
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 204 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Query: 301 KADEWFEQDYTPANPDDDEE 320
FE + ++ D+ E
Sbjct: 263 HQA--FETMFQESSISDEVE 280
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 67
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 126
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 127 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 151
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 152 NHLVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 208
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 209 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 50/242 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKIL---EKNRIIHLKITDQIKREIATLK 69
+ +YE +GEG++G V ++ D+G A+K E + +I KI REI LK
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIK-KIA---LREIRMLK 57
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
LKHPN+V L EV K ++++V EY L + + + E + + Q + V++
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
CH HRD+K ENIL+ IK
Sbjct: 118 CHKHNCIHRDVKP-----------------------------------ENILITKHSVIK 142
Query: 190 ISDFGLSAL---PQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+ DFG + L P + DD + + Y +PE+L G D+W+ G + +L
Sbjct: 143 LCDFGFARLLTGPSDYYDDEV-----ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
Query: 247 TG 248
+G
Sbjct: 198 SG 199
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 67
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 126
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 127 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 151
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 152 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 208
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 209 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 67
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 126
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 127 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 151
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 152 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 208
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 209 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCAKLTDDHVQFLIYQILRG 133
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 134 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 158
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 159 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 273
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 331
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 134/324 (41%), Gaps = 60/324 (18%)
Query: 11 MRLGRYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR 63
M L ++E+ RT LG G +G+V L AVK L+++ + ++ +
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLK 56
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF--- 120
E A +K +KHPN+V+L V + Y++ E++T G L D + R QE L
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 115
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
Q+ + Y K HRDL N
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAA-----------------------------------RNC 140
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCG 239
L+ +K++DFGLS L D H P + APE LA + SD+W+ G
Sbjct: 141 LVGENHLVKVADFGLSRLMTG--DTFTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFG 197
Query: 240 VILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRIT 296
V+L+ I T G P+ + + +Y+ + D+++ P+ L+R + NP R +
Sbjct: 198 VLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 256
Query: 297 IAGIKADEWFEQDYTPANPDDDEE 320
A I FE + ++ D+ E
Sbjct: 257 FAEIHQA--FETMFQESSISDEVE 278
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 62
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 122 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 147 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 203
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 204 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 62
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 122 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 147 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 203
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 204 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 67
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 126
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 127 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 151
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 152 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 208
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 209 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 75
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 134
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 135 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 159
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 160 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 216
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 217 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 64
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 124 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 149 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 205
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 206 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 62
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 122 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 147 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 203
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 204 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 66
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 125
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 126 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 150
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 151 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 207
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 208 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 64
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 124 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 149 NHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 205
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 206 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 99
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 157
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 158 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 182
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 183 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 238 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 297
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 298 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 355
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 99
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 157
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 158 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 182
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 183 ELKILDFGLA---RHTDDE--MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 238 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 297
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 298 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 355
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 126/302 (41%), Gaps = 58/302 (19%)
Query: 13 LGRYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
L ++E+ RT LG G +G+V L AVK L+++ + ++ +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 58
Query: 66 ATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQ 122
A +K +KHPN+V+L V + Y+++E++T G L D + R QE L Q
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQ 117
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ + Y K HRDL N L+
Sbjct: 118 ISSAMEYLEKKNFIHRDLAA-----------------------------------RNCLV 142
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVI 241
+K++DFGLS L D H P + APE LA + SD+W+ GV+
Sbjct: 143 GENHLVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 242 LYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIA 298
L+ I T G P+ + + +Y+ + D+++ P+ L+R + NP R + A
Sbjct: 200 LWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
Query: 299 GI 300
I
Sbjct: 259 EI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 62
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 121
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 122 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 146
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 147 NHLVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLW 203
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 204 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 151/360 (41%), Gaps = 96/360 (26%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDD--GLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ +H D+ G + T Y APE++ N + T DIWS G I+
Sbjct: 163 ELKILDFGLA---RHTDDEMAGFVATRW----YRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 245 ILTGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW------- 274
+LTG F D L A L +KI + ++PK
Sbjct: 216 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 275 -LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 151/360 (41%), Gaps = 96/360 (26%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDD--GLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ +H D+ G + T Y APE++ N + T DIWS G I+
Sbjct: 163 ELKILDFGLA---RHTDDEMAGFVATRW----YRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 245 ILTGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW------- 274
+LTG F D L A L +KI + ++PK
Sbjct: 216 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFI 275
Query: 275 -LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 98
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 156
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 157 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 181
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 182 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 237 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 296
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 297 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 354
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 89
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 147
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 148 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 172
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 173 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 228 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 287
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 288 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 345
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 85
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 144 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 168
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 169 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 283
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 341
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI FGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILGFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 134 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 158
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DFGL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 159 ELKILDFGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 273
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 331
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 53/312 (16%)
Query: 2 VIAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQI 61
++ K+ ++ +E+ + +G G F +V + +G +A+KI+ K ++
Sbjct: 49 IVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCF 108
Query: 62 KREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAE-GRKLF 120
+ E L + +LH ++ +Y+V+EY GG+L ++ G AE R
Sbjct: 109 REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL 168
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
+++ + H G HRD+K +NI
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKP-----------------------------------DNI 193
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHT--TCGSPNYVAPEVL------ANRGYDGAT 232
LLD G+I+++DFG S L R DG + + G+P+Y++PE+L G G
Sbjct: 194 LLDRCGHIRLADFG-SCL--KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPE 250
Query: 233 SDIWSCGVILYVILTGYLPFDDRNLAVLYQKI--FRGDFKLP---KWLSPGAQNLLRKIL 287
D W+ GV Y + G PF + A Y KI ++ LP + + A++ ++++L
Sbjct: 251 CDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL 310
Query: 288 EPNPVKRITIAG 299
P P R+ G
Sbjct: 311 CP-PETRLGRGG 321
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 151/360 (41%), Gaps = 96/360 (26%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 134 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 158
Query: 187 NIKISDFGLSALPQHFRDD--GLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ +H D+ G + T Y APE++ N + T DIWS G I+
Sbjct: 159 ELKILDFGLA---RHTDDEMAGFVATRW----YRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 245 ILTGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW------- 274
+LTG F D L A L +KI + ++PK
Sbjct: 212 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 275 -LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 331
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI D GL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDAGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 54/298 (18%)
Query: 13 LGRYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREI 65
+ ++E+ RT LG G +G+V L AVK L+++ + ++ +E
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 79
Query: 66 ATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ--QL 123
A +K +KHPN+V+L V + Y+V EY+ G L D + R + L+ Q+
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
+ Y K HRDL N L+
Sbjct: 140 SSAMEYLEKKNFIHRDLAA-----------------------------------RNCLVG 164
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVIL 242
+K++DFGLS L D H P + APE LA + SD+W+ GV+L
Sbjct: 165 ENHVVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNTFS-IKSDVWAFGVLL 221
Query: 243 YVILT-GYLPFDDRNLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIA 298
+ I T G P+ +L+ +Y + +G + P+ P L+R + +P R + A
Sbjct: 222 WEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFA 279
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI D GL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDRGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 150/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +GL AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI D GL+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDGGLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 53/288 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+++ LGEG++G V A ++G A+K + + +I +EI+ ++ P+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-----EIIKEISIMQQCDSPH 85
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNKG 134
VV+ + + +++V+EY G + D I + + L E E + Q + G+ Y H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRD+K NILL+++G+ K++DFG
Sbjct: 146 KIHRDIKA-----------------------------------GNILLNTEGHAKLADFG 170
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
++ Q + G+P ++APEV+ GY+ +DIWS G+ + G P+ D
Sbjct: 171 VAG--QLTDXMAKRNXVIGTPFWMAPEVIQEIGYN-CVADIWSLGITAIEMAEGKPPYAD 227
Query: 255 RNLAVLYQKIFR------GDFKLPKWLSPGAQNLLRKILEPNPVKRIT 296
+ + IF F+ P+ S + +++ L +P +R T
Sbjct: 228 IH---PMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 108/253 (42%), Gaps = 67/253 (26%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
LG+G FG+V A++ +A+K K R K++ I E+ L L H VVR +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLS-TILSEVMLLASLNHQYVVRYY 68
Query: 81 EV-------------LASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDG 126
+ KS +++ +EY G L+D I S+ Q E +LF+Q+++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SY H++G+ HRDLK + NI +D
Sbjct: 129 LSYIHSQGIIHRDLKPM-----------------------------------NIFIDESR 153
Query: 187 NIKISDFGLSALPQHFRDDGL-------------LHTTCGSPNYVAPEVLANRGYDGATS 233
N+KI DFGL A H D L L + G+ YVA EVL G+
Sbjct: 154 NVKIGDFGL-AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 234 DIWSCGVILYVIL 246
D++S G+I + ++
Sbjct: 213 DMYSLGIIFFEMI 225
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 269
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 328
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HR+L N L EN L
Sbjct: 329 SAMEYLEKKNFIHRNLAAR-----------------------------NCLVGENHL--- 356
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 357 ---VKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLW 410
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 411 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G+G+FG+V D + A+KI++ Q +EI L P V + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+K+++++EY+ GG D + G L E + + ++++ G+ Y H++ HRD+K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
N+LL G +K++DFG++
Sbjct: 132 A-----------------------------------ANVLLSEHGEVKLADFGVAG---Q 153
Query: 202 FRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
D + T G+P ++APEV+ YD + +DIWS G+ + G P +
Sbjct: 154 LTDTQIKRNTFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSE 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG GN G V SGL A K++ I I +QI RE+ L P +V +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDL 140
S +I + +E++ GG L + GR+ E K+ +I G++Y K + HRD+
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
K NIL++S+G IK+ DFG+S
Sbjct: 194 KP-----------------------------------SNILVNSRGEIKLCDFGVSGQ-- 216
Query: 201 HFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF---DDRNL 257
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P D + L
Sbjct: 217 --LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 273
Query: 258 AVLYQKIFRGD 268
+++ GD
Sbjct: 274 ELMFGCQVEGD 284
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 126/306 (41%), Gaps = 70/306 (22%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 63
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 122
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 123 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 147
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-------NYVAPEVLANRGYDGATSDIWS 237
+K++DFGLS L + T +P + APE LA + SD+W+
Sbjct: 148 NHLVKVADFGLSRL--------MTGDTYTAPAGAKFPIKWTAPESLAYNKF-SIKSDVWA 198
Query: 238 CGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
GV+L+ I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R
Sbjct: 199 FGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 257
Query: 295 ITIAGI 300
+ A I
Sbjct: 258 PSFAEI 263
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 54/255 (21%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKIT----DQIKREIATLKLLKHPNVV 77
LG GN G V SGL A K+ IHL+I +QI RE+ L P +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKL------IHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVF 136
+ S +I + +E++ GG L + GR+ E K+ +I G++Y K +
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 154
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HRD+K NIL++S+G IK+ DFG+S
Sbjct: 155 HRDVKP-----------------------------------SNILVNSRGEIKLCDFGVS 179
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF---D 253
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P D
Sbjct: 180 GQ----LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPD 234
Query: 254 DRNLAVLYQKIFRGD 268
+ L +++ GD
Sbjct: 235 AKELELMFGCQVEGD 249
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 126/306 (41%), Gaps = 70/306 (22%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 64
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 123
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HRDL N L+
Sbjct: 124 SAMEYLEKKNFIHRDLAA-----------------------------------RNCLVGE 148
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-------NYVAPEVLANRGYDGATSDIWS 237
+K++DFGLS L + T +P + APE LA + SD+W+
Sbjct: 149 NHLVKVADFGLSRL--------MTGDTYTAPAGAKFPIKWTAPESLAYNKF-SIKSDVWA 199
Query: 238 CGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
GV+L+ I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R
Sbjct: 200 FGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 258
Query: 295 ITIAGI 300
+ A I
Sbjct: 259 PSFAEI 264
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG GN G V SGL A K++ I I +QI RE+ L P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDL 140
S +I + +E++ GG L + GR+ E K+ +I G++Y K + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
K NIL++S+G IK+ DFG+S
Sbjct: 132 KP-----------------------------------SNILVNSRGEIKLCDFGVSGQ-- 154
Query: 201 HFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF---DDRNL 257
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P D + L
Sbjct: 155 --LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Query: 258 AVLYQKIFRGD 268
+++ GD
Sbjct: 212 ELMFGCQVEGD 222
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG GN G V SGL A K++ I I +QI RE+ L P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDL 140
S +I + +E++ GG L + GR+ E K+ +I G++Y K + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
K NIL++S+G IK+ DFG+S
Sbjct: 132 KP-----------------------------------SNILVNSRGEIKLCDFGVSGQ-- 154
Query: 201 HFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF---DDRNL 257
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P D + L
Sbjct: 155 --LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Query: 258 AVLYQKIFRGD 268
+++ GD
Sbjct: 212 ELMFGCQVEGD 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G+G+FG+V D + A+KI++ Q +EI L P V + +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 92
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+K+++++EY+ GG D + G L E + + ++++ G+ Y H++ HRD+K
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
N+LL G +K++DFG++
Sbjct: 152 A-----------------------------------ANVLLSEHGEVKLADFGVAG---Q 173
Query: 202 FRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
D + T G+P ++APEV+ YD + +DIWS G+ + G P +
Sbjct: 174 LTDTQIKRNTFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSE 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 266
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 325
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HR+L N L EN L
Sbjct: 326 SAMEYLEKKNFIHRNLAAR-----------------------------NCLVGENHL--- 353
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 354 ---VKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLW 407
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 408 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 58/300 (19%)
Query: 15 RYELGRT-------LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
++E+ RT LG G +G+V L AVK L+++ + ++ +E A
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 308
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF---QQLI 124
+K +KHPN+V+L V + Y++ E++T G L D + R QE L Q+
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 367
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y K HR+L N L EN L
Sbjct: 368 SAMEYLEKKNFIHRNLAAR-----------------------------NCLVGENHL--- 395
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+K++DFGLS L D H P + APE LA + SD+W+ GV+L+
Sbjct: 396 ---VKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLW 449
Query: 244 VILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITIAGI 300
I T G P+ +L+ +Y+ + D+++ P+ L+R + NP R + A I
Sbjct: 450 EIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 149/358 (41%), Gaps = 92/358 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLK 72
RY+ +G G +G V A D +G AVK L + IIH K T RE+ LK +K
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 73 HPNVVRLHEV------LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
H NV+ L +V L + +Y+V ++ G +L + I +L + + L Q++ G
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLV-THLMGADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H+ + HRDLK N+ ++
Sbjct: 138 LKYIHSADIIHRDLKP-----------------------------------SNLAVNEDC 162
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
+KI DF L+ +H D+ + + Y APE++ N + T DIWS G I+ +L
Sbjct: 163 ELKILDFYLA---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 247 TGYLPF------DDRNL---------AVLYQKI--------FRGDFKLPKW--------L 275
TG F D L A L +KI + ++PK
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 276 SPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTP-----ANPDD---DEEDIFVD 325
+P A +LL K+L + KRIT A A +F Q + P A+P D + D+ +D
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLID 335
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG GN G V SGL A K++ I I +QI RE+ L P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDL 140
S +I + +E++ GG L + GR+ E K+ +I G++Y K + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
K NIL++S+G IK+ DFG+S
Sbjct: 132 KP-----------------------------------SNILVNSRGEIKLCDFGVSGQ-- 154
Query: 201 HFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF---DDRNL 257
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P D + L
Sbjct: 155 --LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Query: 258 AVLYQKIFRGD 268
+++ GD
Sbjct: 212 ELMFGCQVEGD 222
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG GN G V SGL A K++ I I +QI RE+ L P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDL 140
S +I + +E++ GG L + GR+ E K+ +I G++Y K + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
K NIL++S+G IK+ DFG+S
Sbjct: 132 KP-----------------------------------SNILVNSRGEIKLCDFGVSGQ-- 154
Query: 201 HFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF---DDRNL 257
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P D + L
Sbjct: 155 --LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Query: 258 AVLYQKIFRGD 268
+++ GD
Sbjct: 212 ELMFGCQVEGD 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 69/251 (27%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK----------ITDQIK 62
+ +Y+ +GEG +G V A+D + RI+ LK I
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKD------------SQGRIVALKRIRLDAEDEGIPSTAI 67
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLF 120
REI+ LK L HPN+V L +V+ S+ + +V E++ ++ D+ +K LQ+++ +
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYL 125
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
QL+ GV++CH + HRDLK +N+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKP-----------------------------------QNL 150
Query: 181 LLDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
L++S G +K++DFGL+ +P H + Y AP+VL + DIWS
Sbjct: 151 LINSDGALKLADFGLARAFGIPVR----SYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 238 CGVILYVILTG 248
G I ++TG
Sbjct: 206 IGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 69/251 (27%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK----------ITDQIK 62
+ +Y+ +GEG +G V A+D + RI+ LK I
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKD------------SQGRIVALKRIRLDAEDEGIPSTAI 67
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLF 120
REI+ LK L HPN+V L +V+ S+ + +V E++ ++ D+ +K LQ+++ +
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYL 125
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
QL+ GV++CH + HRDLK +N+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKP-----------------------------------QNL 150
Query: 181 LLDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
L++S G +K++DFGL+ +P H + Y AP+VL + DIWS
Sbjct: 151 LINSDGALKLADFGLARAFGIPVR----SYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 238 CGVILYVILTG 248
G I ++TG
Sbjct: 206 IGCIFAEMITG 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 102
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 163 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 187
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 188 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 69
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 130 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 154
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 155 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 70
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 131 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 155
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 156 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 71
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 132 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 156
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 75
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 136 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 160
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 161 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 119/292 (40%), Gaps = 55/292 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E LG GN G V SGL A K++ I I +QI RE+ L P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 65
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-G 134
+V + S +I + +E++ GG L + GR+ E K+ +I G++Y K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRD+K NIL++S+G IK+ DFG
Sbjct: 126 IMHRDVKP-----------------------------------SNILVNSRGEIKLCDFG 150
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF-- 252
+S D + ++ G+ +Y++PE L Y SDIWS G+ L + G P
Sbjct: 151 VSGQ----LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 253 -----DDRNLAVLYQKIFRGDFKLPKWLSPGA-----QNLLRKILEPNPVKR 294
D R +++ + + P L G Q+ + K L NP +R
Sbjct: 206 PDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 257
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 74
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 135 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 159
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 77
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 138 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 162
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 163 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 76
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 137 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 161
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 162 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G+G+FG+V D + A+KI++ Q +EI L P + R
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+K+++++EY+ GG D + G L+E + ++++ G+ Y H++ HRD+K
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
N+LL +G++K++DFG++
Sbjct: 144 A-----------------------------------ANVLLSEQGDVKLADFGVAG---Q 165
Query: 202 FRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
D + G+P ++APEV+ YD +DIWS G+ + G P D
Sbjct: 166 LTDTQIKRNXFVGTPFWMAPEVIKQSAYD-FKADIWSLGITAIELAKGEPPNSD 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 74
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + A R+ + + Q+ G+ Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 135 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 159
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 78
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 139 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 163
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 164 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 71
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 132 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 156
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 48/243 (19%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
LG +G GNFG+V + AVK + LK + +E LK HPN+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIV 175
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDGVSYCHNKGVF 136
RL V K IY+V+E V GG+ + ++G RL+ ++ G+ Y +K
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HRDL N L+ K +KISDFG+S
Sbjct: 236 HRDLAA-----------------------------------RNCLVTEKNVLKISDFGMS 260
Query: 197 ALPQHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
DG+ + G + APE L N G + SD+WS G++L+ + G P
Sbjct: 261 ----REEADGVXAASGGLRQVPVKWTAPEAL-NYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 252 FDD 254
+ +
Sbjct: 316 YPN 318
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 48/243 (19%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
LG +G GNFG+V + AVK + LK + +E LK HPN+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIV 175
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDGVSYCHNKGVF 136
RL V K IY+V+E V GG+ + ++G RL+ ++ G+ Y +K
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HRDL N L+ K +KISDFG+S
Sbjct: 236 HRDLAA-----------------------------------RNCLVTEKNVLKISDFGMS 260
Query: 197 ALPQHFRDDGLLHTTCG----SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
DG+ + G + APE L N G + SD+WS G++L+ + G P
Sbjct: 261 ----REEADGVYAASGGLRQVPVKWTAPEAL-NYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 252 FDD 254
+ +
Sbjct: 316 YPN 318
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 89
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 150 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 174
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 230
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 46/252 (18%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+E LG GN G V Q SGL A K++ I I +QI RE+ L P
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 75
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG- 134
+V + S +I + +E++ GG L + R+ E K+ ++ G++Y K
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRD+K NIL++S+G IK+ DFG
Sbjct: 136 IMHRDVKP-----------------------------------SNILVNSRGEIKLCDFG 160
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF-- 252
+S D + ++ G+ +Y+APE L Y SDIWS G+ L + G P
Sbjct: 161 VSGQ----LIDSMANSFVGTRSYMAPERLQGTHYS-VQSDIWSMGLSLVELAVGRYPIPP 215
Query: 253 -DDRNLAVLYQK 263
D + L ++ +
Sbjct: 216 PDAKELEAIFGR 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G+G+FG+V D + A+KI++ Q +EI L P V + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 87
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+K+++++EY+ GG D + G L E + + ++++ G+ Y H++ HRD+K
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
N+LL G +K++DFG++
Sbjct: 147 AA-----------------------------------NVLLSEHGEVKLADFGVAG---Q 168
Query: 202 FRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
D + G+P ++APEV+ YD + +DIWS G+ + G P +
Sbjct: 169 LTDTQIKRNXFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSE 221
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 89
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 150 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 174
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 43/234 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G+G+FG+V D + A+KI++ Q +EI L V + +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSSYVTKYYG 88
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
SK+++++EY+ GG D + + G E + + ++++ G+ Y H++ HRD+K
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
N+LL +G++K++DFG++
Sbjct: 148 A-----------------------------------ANVLLSEQGDVKLADFGVAG---Q 169
Query: 202 FRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
D + T G+P ++APEV+ YD + +DIWS G+ + G P D
Sbjct: 170 LTDTQIKRNTFVGTPFWMAPEVIQQSAYD-SKADIWSLGITAIELAKGEPPNSD 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 50/238 (21%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+YE +GEG +GKV A+DL +G F + + + RE+A L+ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 72 KHPNVVRLHEVLA-----SKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLI 124
+HPNVVRL +V ++K+ +V E+V DK+ G E +F QL+
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLL 130
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ V HRDLK +NIL+ S
Sbjct: 131 RGLDFLHSHRVVHRDLKP-----------------------------------QNILVTS 155
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
G IK++DFGL+ + + L + + Y APEVL Y D+WS G I
Sbjct: 156 SGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIF 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G+G+FG+V D + A+KI++ Q +EI L P V + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+K+++++EY+ GG D + G L E + + ++++ G+ Y H++ HRD+K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQH 201
N+LL G +K++DFG++
Sbjct: 132 A-----------------------------------ANVLLSEHGEVKLADFGVAG---Q 153
Query: 202 FRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
D + G+P ++APEV+ YD + +DIWS G+ + G P +
Sbjct: 154 LTDTQIKRNXFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSE 206
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 121/286 (42%), Gaps = 61/286 (21%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKIT----DQIKREIATLKLLKHPNVV 77
LG GN G V SGL A K+ IHL+I +QI RE+ L P +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKL------IHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVF 136
+ S +I + +E++ GG L + GR+ E K+ +I G++Y K +
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 146
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HRD+K NIL++S+G IK+ DFG+S
Sbjct: 147 HRDVKP-----------------------------------SNILVNSRGEIKLCDFGVS 171
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRN 256
D + ++ G+ +Y++PE L Y SDIWS G+ L + G P +
Sbjct: 172 GQ----LIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIGSGS 226
Query: 257 LAVLYQKIFRGDF-------KLPKWL-SPGAQNLLRKILEPNPVKR 294
++ ++ D+ KLP + S Q+ + K L NP +R
Sbjct: 227 GSMAIFELL--DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 270
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 50/238 (21%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+YE +GEG +GKV A+DL +G F + + + RE+A L+ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 72 KHPNVVRLHEVLA-----SKSKIYMVLEYVTG--GELFDKIASKGRLQEAEGRKLFQQLI 124
+HPNVVRL +V ++K+ +V E+V DK+ G E +F QL+
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLL 130
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ V HRDLK +NIL+ S
Sbjct: 131 RGLDFLHSHRVVHRDLKP-----------------------------------QNILVTS 155
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
G IK++DFGL+ + + L + + Y APEVL Y D+WS G I
Sbjct: 156 SGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIF 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 50/238 (21%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL--- 71
+YE +GEG +GKV A+DL +G F + + + RE+A L+ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 72 KHPNVVRLHEVLA-----SKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLI 124
+HPNVVRL +V ++K+ +V E+V DK+ G E +F QL+
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLL 130
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ V HRDLK +NIL+ S
Sbjct: 131 RGLDFLHSHRVVHRDLKP-----------------------------------QNILVTS 155
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
G IK++DFGL+ + + L + + Y APEVL Y D+WS G I
Sbjct: 156 SGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIF 209
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 45/208 (21%)
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ- 121
RE++ LK LKH N+V LH+++ ++ + +V EY+ +L + G + KLF
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLF 107
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
QL+ G++YCH + V HRDLK +N+L
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKP-----------------------------------QNLL 132
Query: 182 LDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
++ +G +K++DFGL+ ++P D+ ++ + Y P++L D+W
Sbjct: 133 INERGELKLADFGLARAKSIPTKTYDNEVV-----TLWYRPPDILLGSTDYSTQIDMWGV 187
Query: 239 GVILYVILTGYLPFDDRNLAVLYQKIFR 266
G I Y + TG F + IFR
Sbjct: 188 GCIFYEMATGRPLFPGSTVEEQLHFIFR 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
R LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 74
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++E++ G L + + K R+ + + Q+ G+ Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 135 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 159
Query: 192 DFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ LPQ + + APE L + A SD+WS GV+LY + T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 67/253 (26%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
LG+G FG+V A++ +A+K K R K++ I E+ L L H VVR +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLS-TILSEVMLLASLNHQYVVRYY 68
Query: 81 EV-------------LASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDG 126
+ KS +++ +EY L+D I S+ Q E +LF+Q+++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SY H++G+ HRDLK + NI +D
Sbjct: 129 LSYIHSQGIIHRDLKPM-----------------------------------NIFIDESR 153
Query: 187 NIKISDFGLSALPQHFRDDGL-------------LHTTCGSPNYVAPEVLANRGYDGATS 233
N+KI DFGL A H D L L + G+ YVA EVL G+
Sbjct: 154 NVKIGDFGL-AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 234 DIWSCGVILYVIL 246
D++S G+I + ++
Sbjct: 213 DMYSLGIIFFEMI 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 85/343 (24%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-----ILEKNRIIHLKITDQI 61
K++ + Y + RTL +G F K+ + D+ +A+K +LEK R D+I
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCEK-DNKF-YALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 62 ---------KREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGEL--FDK---IAS 107
K E+ + +K+ + ++ + ++Y++ EY+ + FD+ +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 108 KGR---LQEAEGRKLFQQLIDGVSYCHN-KGVFHRDLKVILKSCHMRIATLQVFLLTFLL 163
K + + + + +++ SY HN K + HRD+K
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK---------------------- 179
Query: 164 MIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVL 223
P NIL+D G +K+SDFG S + D + + G+ ++ PE
Sbjct: 180 -----P--------SNILMDKNGRVKLSDFGES----EYMVDKKIKGSRGTYEFMPPEFF 222
Query: 224 ANRG-YDGATSDIWSCGVILYVILTGYLPFDDR-NLAVLYQKIFRGDFKLP--------- 272
+N Y+GA DIWS G+ LYV+ +PF + +L L+ I + + P
Sbjct: 223 SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYP 282
Query: 273 ----------KWLSPGAQNLLRKILEPNPVKRITIAGIKADEW 305
+LS + L+ L NP +RIT EW
Sbjct: 283 LTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG G FG+V Q +G +A K L K R+ K E L + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 HEVLASKSKIYMVLEYVTGGEL----FDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+K+ + +V+ + GG++ ++ QE Q++ G+ + H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
+RDLK EN+LLD GN++ISD GL
Sbjct: 311 IYRDLKP-----------------------------------ENVLLDDDGNVRISDLGL 335
Query: 196 SALPQHFRDDGLLHTT--CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFD 253
+ + G T G+P ++APE+L YD + D ++ GV LY ++ PF
Sbjct: 336 AVELKA----GQTKTKGYAGTPGFMAPELLLGEEYDFSV-DYFALGVTLYEMIAARGPFR 390
Query: 254 DRNLAV----LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
R V L Q++ P SP +++ +L+ +P KR+
Sbjct: 391 ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG G FG+V Q +G +A K L K R+ K E L + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 HEVLASKSKIYMVLEYVTGGEL----FDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+K+ + +V+ + GG++ ++ QE Q++ G+ + H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
+RDLK EN+LLD GN++ISD GL
Sbjct: 311 IYRDLKP-----------------------------------ENVLLDDDGNVRISDLGL 335
Query: 196 SALPQHFRDDGLLHTT--CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFD 253
+ + G T G+P ++APE+L YD + D ++ GV LY ++ PF
Sbjct: 336 AVELKA----GQTKTKGYAGTPGFMAPELLLGEEYDFSV-DYFALGVTLYEMIAARGPFR 390
Query: 254 DRNLAV----LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
R V L Q++ P SP +++ +L+ +P KR+
Sbjct: 391 ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG G FG+V Q +G +A K L K R+ K E L + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 HEVLASKSKIYMVLEYVTGGEL----FDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+K+ + +V+ + GG++ ++ QE Q++ G+ + H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
+RDLK EN+LLD GN++ISD GL
Sbjct: 311 IYRDLKP-----------------------------------ENVLLDDDGNVRISDLGL 335
Query: 196 SALPQHFRDDGLLHTT--CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFD 253
+ + G T G+P ++APE+L YD + D ++ GV LY ++ PF
Sbjct: 336 AVELKA----GQTKTKGYAGTPGFMAPELLLGEEYDFSV-DYFALGVTLYEMIAARGPFR 390
Query: 254 DRNLAV----LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
R V L Q++ P SP +++ +L+ +P KR+
Sbjct: 391 ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 64
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + AS+ + + + + +Q G+ Y
Sbjct: 65 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 124 LHAKSIIHRDLKS-----------------------------------NNIFLHEDNTVK 148
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT--SDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV+ + + + SD+++ G++LY ++T
Sbjct: 149 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 209 GQLPYSNIN 217
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R LG G FG+V Q +G +A K L K R+ K E L + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 HEVLASKSKIYMVLEYVTGGEL----FDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
+K+ + +V+ + GG++ ++ QE Q++ G+ + H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
+RDLK EN+LLD GN++ISD GL
Sbjct: 311 IYRDLKP-----------------------------------ENVLLDDDGNVRISDLGL 335
Query: 196 SALPQHFRDDGLLHTT--CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFD 253
+ + G T G+P ++APE+L YD + D ++ GV LY ++ PF
Sbjct: 336 AVELKA----GQTKTKGYAGTPGFMAPELLLGEEYDFSV-DYFALGVTLYEMIAARGPFR 390
Query: 254 DRNLAV----LYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
R V L Q++ P SP +++ +L+ +P KR+
Sbjct: 391 ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 71
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HRDL NIL++++ +KI
Sbjct: 132 TKRYIHRDLAT-----------------------------------RNILVENENRVKIG 156
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ + ++ + SP + APE L + A SD+WS GV+LY + T
Sbjct: 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 114/276 (41%), Gaps = 45/276 (16%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG GN G V SGL A K++ I I +QI RE+ L P +V +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDL 140
S +I + +E++ GG L + GR+ E K+ +I G++Y K + HRD+
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
K NIL++S+G IK+ DFG+S
Sbjct: 135 KP-----------------------------------SNILVNSRGEIKLCDFGVSGQ-- 157
Query: 201 HFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVL 260
D + + G+ +Y++PE L Y SDIWS G+ L + G P + L
Sbjct: 158 --LIDEMANEFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPRPPMAIFEL 214
Query: 261 YQKIF-RGDFKLPKWL-SPGAQNLLRKILEPNPVKR 294
I KLP + S Q+ + K L NP +R
Sbjct: 215 LDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 54/254 (21%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
G +EL +G G +G+V + + +G A+K+++ + ++IK+EI LK H
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSH 79
Query: 74 P-NVVRLHEVLASKS------KIYMVLEYVTGGELFDKIA-SKGR-LQEAEGRKLFQQLI 124
N+ + K+ ++++V+E+ G + D I +KG L+E + ++++
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+S+ H V HRD+K +N+LL
Sbjct: 140 RGLSHLHQHKVIHRDIKG-----------------------------------QNVLLTE 164
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT----SDIWSCGV 240
+K+ DFG+SA Q R G +T G+P ++APEV+A AT SD+WS G+
Sbjct: 165 NAEVKLVDFGVSA--QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222
Query: 241 ILYVILTGYLPFDD 254
+ G P D
Sbjct: 223 TAIEMAEGAPPLCD 236
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 46/247 (18%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R +G G+FG V FA+D+ + A+K + + + I +E+ L+ L+HPN ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++V+EY G K LQE E + + G++Y H+ + HRD
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K NILL G +K+ DFG +++
Sbjct: 180 VKA-----------------------------------GNILLSEPGLVKLGDFGSASIM 204
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVL--ANRG-YDGATSDIWSCGVILYVILTGYLP-FDDR 255
+ G+P ++APEV+ + G YDG D+WS G+ + P F+
Sbjct: 205 ------APANXFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGITCIELAERKPPLFNMN 257
Query: 256 NLAVLYQ 262
++ LY
Sbjct: 258 AMSALYH 264
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 87/316 (27%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT-LKLLKHPNVV 77
+ LG G GKV + + FA+K+L+ + +RE+ + + P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 78 RLHEVL----ASKSKIYMVLEYVTGGELFDKIASKG--RLQEAEGRKLFQQLIDGVSYCH 131
R+ +V A + + +V+E + GGELF +I +G E E ++ + + + + Y H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSK---GNI 188
+ + HRD+K EN+L SK +
Sbjct: 135 SINIAHRDVKP-----------------------------------ENLLYTSKRPNAIL 159
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
K++DFG A E + YD + D+WS GVI+Y++L G
Sbjct: 160 KLTDFGF-----------------------AKETTGEK-YD-KSCDMWSLGVIMYILLCG 194
Query: 249 YLPF-DDRNLAV---LYQKIFRGDFKL--PKW--LSPGAQNLLRKILEPNPVKRITIAGI 300
Y PF + LA+ + +I G ++ P+W +S + L+R +L+ P +R+TI
Sbjct: 195 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 254
Query: 301 KADEWFEQDY-TPANP 315
W Q P P
Sbjct: 255 MNHPWIMQSTKVPQTP 270
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 46/247 (18%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
R +G G+FG V FA+D+ + A+K + + + I +E+ L+ L+HPN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ ++V+EY G K LQE E + + G++Y H+ + HRD
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
+K NILL G +K+ DFG +++
Sbjct: 141 VKA-----------------------------------GNILLSEPGLVKLGDFGSASIM 165
Query: 200 QHFRDDGLLHTTCGSPNYVAPEVL--ANRG-YDGATSDIWSCGVILYVILTGYLP-FDDR 255
+ G+P ++APEV+ + G YDG D+WS G+ + P F+
Sbjct: 166 ------APANXFVGTPYWMAPEVILAMDEGQYDGKV-DVWSLGITCIELAERKPPLFNMN 218
Query: 256 NLAVLYQ 262
++ LY
Sbjct: 219 AMSALYH 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 138/340 (40%), Gaps = 82/340 (24%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 101
Query: 75 NVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
N++ +++++ + + +Y+V ++ G +L+ K+ L Q++ G+ Y
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLV-THLMGADLY-KLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRDLK N+LL++ ++K
Sbjct: 160 IHSANVLHRDLKP-----------------------------------SNLLLNTTXDLK 184
Query: 190 ISDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVIL 246
I DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L
Sbjct: 185 ICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEML 242
Query: 247 TG--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPG 278
+ YL + L +L Y K+P W L P
Sbjct: 243 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPN 301
Query: 279 AQ----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
A +LL K+L NP KRI + A + EQ Y P++
Sbjct: 302 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 341
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 52/250 (20%)
Query: 11 MRLGRYELG--RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL 68
M L R E+ + LG G FG VK + AVK++++ + D+ +E T+
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSE----DEFFQEAQTM 57
Query: 69 KLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGV 127
L HP +V+ + V + + IY+V EY++ G L + + S G+ L+ ++ ++ + +G+
Sbjct: 58 MKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM 117
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + HRDL N L+D
Sbjct: 118 AFLESHQFIHRDLAA-----------------------------------RNCLVDRDLC 142
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYV 244
+K+SDFG++ ++ DD + ++ G+ + APEV Y + SD+W+ G++++
Sbjct: 143 VKVSDFGMT---RYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKY-SSKSDVWAFGILMWE 197
Query: 245 ILT-GYLPFD 253
+ + G +P+D
Sbjct: 198 VFSLGKMPYD 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 49/237 (20%)
Query: 20 RTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ LG+GNFG V+ QD ++G AVK L+ + HL+ +REI LK L+H
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQD-NTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHD 72
Query: 75 NVVRLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCH 131
N+V+ V A + + +++EY+ G L D + K R+ + + Q+ G+ Y
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
K HR+L NIL++++ +KI
Sbjct: 133 TKRYIHRNLAT-----------------------------------RNILVENENRVKIG 157
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
DFGL+ + ++ + SP + APE L + A SD+WS GV+LY + T
Sbjct: 158 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 213
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 53/237 (22%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLKHPNVV 77
R +G G +G V A D AVK L + +IH + T RE+ LK LKH NV+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHENVI 90
Query: 78 RLHEVLASK------SKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
L +V S++Y+V + G +L + + S+ L + + L QL+ G+ Y H
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIH 148
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G+ HRDLK N+ ++ ++I
Sbjct: 149 SAGIIHRDLKP-----------------------------------SNVAVNEDSELRIL 173
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
DFGL+ + D + + Y APE++ N + T DIWS G I+ +L G
Sbjct: 174 DFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 145 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 169
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 170 ALPQN-DDHXVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 227
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 228 LNGSQILHKIDKEGERLPR 246
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 76
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + AS+ + + + + +Q G+ Y
Sbjct: 77 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 136 LHAKSIIHRDLKS-----------------------------------NNIFLHEDNTVK 160
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT--SDIWSCGVILYVILT 247
I DFGL+ + GS ++APEV+ + + + SD+++ G++LY ++T
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 221 GQLPYSNIN 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 39/288 (13%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
L +G G FGKV A + + + + I I + +++E +LKHPN++
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTI-ENVRQEAKLFAMLKHPNII 69
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV-- 135
L V + + +V+E+ GG L +++ S R+ Q+ G++Y H++ +
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 136 -FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDLK I LQ ++EN L +K +KI+DFG
Sbjct: 129 IIHRDLK------SSNILILQ--------------------KVENGDLSNK-ILKITDFG 161
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+ + R + + G+ ++APEV+ + SD+WS GV+L+ +LTG +PF
Sbjct: 162 LAR--EWHRTTKM--SAAGAYAWMAPEVIRASMFSKG-SDVWSYGVLLWELLTGEVPFRG 216
Query: 255 RN-LAVLYQ-KIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGI 300
+ LAV Y + + +P L+ P+P R + I
Sbjct: 217 IDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 135 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 159
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 160 ALPQN-DDHXVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 217
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 218 LNGSQILHKIDKEGERLPR 236
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 73 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 131
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 132 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 156
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 157 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 212
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 213 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 68 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 127 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 151
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 152 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 207
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 208 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 139 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 163
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 164 ALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 221
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 222 LNGSQILHKIDKEGERLPR 240
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 99 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 157
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 158 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 182
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 183 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 238
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 239 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 292
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 74 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 132
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 133 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 157
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 158 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 213
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 214 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 267
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 130 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 154
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 155 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 210
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 145 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 169
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 170 ALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 227
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 228 LNGSQILHKIDKEGERLPR 246
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 135 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 159
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 160 ALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 217
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 218 LNGSQILHKIDKEGERLPR 236
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 130 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 154
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 155 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 210
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 76 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 134
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 135 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 159
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 160 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 215
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 216 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 62/268 (23%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
+L + LG G FG+V ++ AVK L+ + E +K L+H +
Sbjct: 16 KLVKRLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKL 70
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID-------GVSY 129
VRL+ V+ + IY++ EY+ G L D + S + G+ L +LID G++Y
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKS-----DEGGKVLLPKLIDFSAQIAEGMAY 125
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
K HRDL+ NVL E+++ K
Sbjct: 126 IERKNYIHRDLRAA-----------------------------NVLVSESLM------CK 150
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
I+DFGL+ + + D G+ + APE + N G SD+WS G++LY I+
Sbjct: 151 IADFGLARVIE----DNEYTAREGAKFPIKWTAPEAI-NFGCFTIKSDVWSFGILLYEIV 205
Query: 247 T-GYLPFDDRNLAVLYQKIFRGDFKLPK 273
T G +P+ R A + + +G +++P+
Sbjct: 206 TYGKIPYPGRTNADVMTALSQG-YRMPR 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 86
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 132
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ YC+N H + + L SC ++A +L + + L N+L+
Sbjct: 133 LEYCYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLAS-------KKCIHRDLAARNVLV 183
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 184 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 240
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 241 LLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 71
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 117
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ YC+N H + + L SC ++A +L + + L N+L+
Sbjct: 118 LEYCYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-------HRDLAARNVLV 168
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 169 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGV 225
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 226 LLWEIFT 232
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 139 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 163
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 164 ALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 221
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 222 LNGSQILHKIDKEGERLPR 240
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 98/244 (40%), Gaps = 52/244 (21%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK--REIATL 68
M RYE +G G +G V A+D SG A+K + I RE+A L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 69 KLLK---HPNVVRLHEVLASKS-----KIYMVLEYVTGG--ELFDKIASKGRLQEAEGRK 118
+ L+ HPNVVRL +V A+ K+ +V E+V DK G L +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKD 124
Query: 119 LFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLE 178
L +Q + G+ + H + HRDLK E
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKP-----------------------------------E 149
Query: 179 NILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
NIL+ S G +K++DFGL+ + + L + Y APEVL Y D+WS
Sbjct: 150 NILVTSGGTVKLADFGLARI---YSYQMALTPVVVTLWYRAPEVLLQSTY-ATPVDMWSV 205
Query: 239 GVIL 242
G I
Sbjct: 206 GCIF 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 130 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 154
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 155 FGLS---RYMEDSTXXKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 210
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 45/259 (17%)
Query: 22 LGEGNFGKVKFAQ-DLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
LG+G+FG V+ + D SG + AVK L+ + + + D RE+ + L H N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
L+ V+ + + MV E G L D++ +G + Q+ +G+ Y +K H
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL-S 196
RDL N+LL ++ +KI DFGL
Sbjct: 135 RDLAA-----------------------------------RNLLLATRDLVKIGDFGLMR 159
Query: 197 ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
ALPQ+ D ++ P + APE L R + A SD W GV L+ + T G P+
Sbjct: 160 ALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 217
Query: 255 RNLAVLYQKIFRGDFKLPK 273
N + + KI + +LP+
Sbjct: 218 LNGSQILHKIDKEGERLPR 236
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILE-KNRIIHLKITDQIKREIATLK 69
M RYE +G G +G V A+D SG A+K + N L I+ RE+A L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLR 58
Query: 70 LLK---HPNVVRLHEVLASKS-----KIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKL 119
L+ HPNVVRL +V A+ K+ +V E+V DK G L + L
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDL 117
Query: 120 FQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLEN 179
+Q + G+ + H + HRDLK EN
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKP-----------------------------------EN 142
Query: 180 ILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
IL+ S G +K++DFGL+ + + L + Y APEVL Y D+WS G
Sbjct: 143 ILVTSGGTVKLADFGLARI---YSYQMALDPVVVTLWYRAPEVLLQSTY-ATPVDMWSVG 198
Query: 240 VIL 242
I
Sbjct: 199 CIF 201
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILE-KNRIIHLKITDQIKREIATLK 69
M RYE +G G +G V A+D SG A+K + N L I+ RE+A L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLR 58
Query: 70 LLK---HPNVVRLHEVLASKS-----KIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKL 119
L+ HPNVVRL +V A+ K+ +V E+V DK G L + L
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDL 117
Query: 120 FQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLEN 179
+Q + G+ + H + HRDLK EN
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKP-----------------------------------EN 142
Query: 180 ILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
IL+ S G +K++DFGL+ + + L + Y APEVL Y D+WS G
Sbjct: 143 ILVTSGGTVKLADFGLARI---YSYQMALFPVVVTLWYRAPEVLLQSTY-ATPVDMWSVG 198
Query: 240 VIL 242
I
Sbjct: 199 CIF 201
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 11 MRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILE-KNRIIHLKITDQIKREIATLK 69
M RYE +G G +G V A+D SG A+K + N L I+ RE+A L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLR 58
Query: 70 LLK---HPNVVRLHEVLASKS-----KIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKL 119
L+ HPNVVRL +V A+ K+ +V E+V DK G L + L
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDL 117
Query: 120 FQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLEN 179
+Q + G+ + H + HRDLK EN
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKP-----------------------------------EN 142
Query: 180 ILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
IL+ S G +K++DFGL+ + + L + Y APEVL Y D+WS G
Sbjct: 143 ILVTSGGTVKLADFGLARI---YSYQMALAPVVVTLWYRAPEVLLQSTY-ATPVDMWSVG 198
Query: 240 VIL 242
I
Sbjct: 199 CIF 201
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 139/346 (40%), Gaps = 82/346 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY + +GEG +G V A D A+K + H + REI L +H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE--HQTYCQRTLREIQILLRFRHE 101
Query: 75 NVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
NV+ + ++L + + +Y+V + + +L+ K+ +L Q++ G+ Y
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQD-LMETDLY-KLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRDLK N+L+++ ++K
Sbjct: 160 IHSANVLHRDLKP-----------------------------------SNLLINTTCDLK 184
Query: 190 ISDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVIL 246
I DFGL+ A P+H G L + Y APE++ N +GY + DIWS G IL +L
Sbjct: 185 ICDFGLARIADPEH-DHTGFLTEXVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEML 242
Query: 247 TG--------YLPFDDRNLAVL------------------YQKIFRGDFKL------PKW 274
+ YL + L +L Y + K+ PK
Sbjct: 243 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKS 302
Query: 275 LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDYTPANPDDDEE 320
S A +LL ++L NP KRIT+ A + EQ Y P + EE
Sbjct: 303 DS-KALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEE 347
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
G +E+ LG G FG V D+G A+K + + K ++ EI +K L H
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNH 71
Query: 74 PNVVRLHEV------LASKSKIYMVLEYVTGGEL---FDKIASKGRLQEAEGRKLFQQLI 124
PNVV EV LA + +EY GG+L ++ + L+E R L +
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y H + HRDLK IV++P ++
Sbjct: 132 SALRYLHENRIIHRDLKP--------------------ENIVLQPGPQRLIH-------- 163
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
KI D G + D G L T G+ Y+APE+L + Y T D WS G + +
Sbjct: 164 ----KIIDLGYAK----ELDQGELCTEFVGTLQYLAPELLEQKKYT-VTVDYWSFGTLAF 214
Query: 244 VILTGYLPF 252
+TG+ PF
Sbjct: 215 ECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
G +E+ LG G FG V D+G A+K + + K ++ EI +K L H
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNH 72
Query: 74 PNVVRLHEV------LASKSKIYMVLEYVTGGEL---FDKIASKGRLQEAEGRKLFQQLI 124
PNVV EV LA + +EY GG+L ++ + L+E R L +
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ Y H + HRDLK IV++P ++
Sbjct: 133 SALRYLHENRIIHRDLKP--------------------ENIVLQPGPQRLIH-------- 164
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTT-CGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
KI D G + D G L T G+ Y+APE+L + Y T D WS G + +
Sbjct: 165 ----KIIDLGYAK----ELDQGELCTEFVGTLQYLAPELLEQKKYT-VTVDYWSFGTLAF 215
Query: 244 VILTGYLPF 252
+TG+ PF
Sbjct: 216 ECITGFRPF 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 76
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++ ++ +V ++ G L+ + AS+ + + + + +Q G+ Y
Sbjct: 77 TRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 136 LHAKSIIHRDLKS-----------------------------------NNIFLHEDNTVK 160
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT--SDIWSCGVILYVILT 247
I DFGL+ + GS ++APEV+ + + + SD+++ G++LY ++T
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 221 GQLPYSNIN 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLKHPNVV 77
R +G G +G V A D AVK L + +IH + T RE+ LK LKH NV+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHENVI 90
Query: 78 RLHEVLASK------SKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
L +V S++Y+V + G +L + + + L + + L QL+ G+ Y H
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIH 148
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G+ HRDLK N+ ++ ++I
Sbjct: 149 SAGIIHRDLKP-----------------------------------SNVAVNEDSELRIL 173
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
DFGL+ + D + + Y APE++ N + T DIWS G I+ +L G
Sbjct: 174 DFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 451 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ S +K+ D
Sbjct: 510 KRFVHRDIAA-----------------------------------RNVLVSSNDCVKLGD 534
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 535 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 590
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 591 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLKHPNVV 77
R +G G +G V A D AVK L + +IH + T RE+ LK LKH NV+
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHENVI 82
Query: 78 RLHEVLASK------SKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
L +V S++Y+V + G +L + + + L + + L QL+ G+ Y H
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIH 140
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G+ HRDLK N+ ++ ++I
Sbjct: 141 SAGIIHRDLKP-----------------------------------SNVAVNEDCELRIL 165
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
DFGL+ + D + + Y APE++ N + T DIWS G I+ +L G
Sbjct: 166 DFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 102/258 (39%), Gaps = 65/258 (25%)
Query: 12 RLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLK 69
R RYE LGEG F V A+D ++ A+K ++ K I REI L+
Sbjct: 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 70 LLKHPNVVRLHEVLASKSKIYMVLEYV-TGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
L HPN++ L + KS I +V +++ T E+ K S L + + + G+
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL-VLTPSHIKAYMLMTLQGLE 126
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
Y H + HRDLK N+LLD G +
Sbjct: 127 YLHQHWILHRDLKP-----------------------------------NNLLLDENGVL 151
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPN-----------YVAPEVLANRGYDGATSDIWS 237
K++DFGL+ + GSPN Y APE+L G D+W+
Sbjct: 152 KLADFGLA-------------KSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWA 198
Query: 238 CGVILYVIL--TGYLPFD 253
G IL +L +LP D
Sbjct: 199 VGCILAELLLRVPFLPGD 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ + +K+ D
Sbjct: 130 KRFVHRDIAA-----------------------------------RNVLVSATDCVKLGD 154
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 155 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 210
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 60/245 (24%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKHP 74
G LG+G FG+ ++G +K L ++ ++ +R E+ ++ L+HP
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKEL-------IRFDEETQRTFLKEVKVMRCLEHP 67
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF-QQLIDGVSYCHNK 133
NV++ VL ++ + EY+ GG L I S R F + + G++Y H+
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
+ HRDL N L+ N+ ++DF
Sbjct: 128 NIIHRDLNS-----------------------------------HNCLVRENKNVVVADF 152
Query: 194 GLSAL-------PQHFR-----DDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
GL+ L P+ R D +T G+P ++APE++ R YD D++S G++
Sbjct: 153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKV-DVFSFGIV 211
Query: 242 LYVIL 246
L I+
Sbjct: 212 LCEII 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLP-FAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
R ELGR +GEG FG V + P AV I + ++ +E T++ H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHN 132
P++V+L V+ +++ +++++E T GEL + + + L+ QL ++Y +
Sbjct: 451 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
K HRD+ N+L+ + +K+ D
Sbjct: 510 KRFVHRDIAA-----------------------------------RNVLVSATDCVKLGD 534
Query: 193 FGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FGLS ++ D + G ++APE + R + A SD+W GV ++ IL G
Sbjct: 535 FGLS---RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGV 590
Query: 250 LPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
PF + +I G+ +P P +L+ K +P +R +KA
Sbjct: 591 KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 67/250 (26%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
LG+G FG+V A++ +A+K K R K++ I E+ L L H VVR +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLS-TILSEVXLLASLNHQYVVRYY 68
Query: 81 EV-------------LASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDG 126
+ KS +++ EY L+D I S+ Q E +LF+Q+++
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+SY H++G+ HR+LK NI +D
Sbjct: 129 LSYIHSQGIIHRNLKP-----------------------------------XNIFIDESR 153
Query: 187 NIKISDFGLSALPQHFRDDGL-------------LHTTCGSPNYVAPEVLANRGYDGATS 233
N+KI DFGL A H D L L + G+ YVA EVL G+
Sbjct: 154 NVKIGDFGL-AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
Query: 234 DIWSCGVILY 243
D +S G+I +
Sbjct: 213 DXYSLGIIFF 222
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
G +GEG FG V + +++ K+ I ++ Q +EI + +H N+V
Sbjct: 36 GNKMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIAS---KGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
L + + +V Y+ G L D+++ L K+ Q +G+++ H
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K NILLD KISDFGL
Sbjct: 155 IHRDIKS-----------------------------------ANILLDEAFTAKISDFGL 179
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + F + G+ Y+APE L RG SDI+S GV+L I+TG D+
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEH 237
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
G +GEG FG V + +++ K+ I ++ Q +EI + +H N+V
Sbjct: 36 GNKMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIAS---KGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
L + + +V Y+ G L D+++ L K+ Q +G+++ H
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K NILLD KISDFGL
Sbjct: 155 IHRDIKS-----------------------------------ANILLDEAFTAKISDFGL 179
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + F + G+ Y+APE L RG SDI+S GV+L I+TG D+
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEH 237
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 141 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 165
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 166 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 223
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 282
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 141 HSANVLHRDLKP-----------------------------------SNLLLNTTXDLKI 165
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 166 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 223
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 282
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 83
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 143 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 167
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 168 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 225
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 284
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 323
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
G +GEG FG V + +++ K+ I ++ Q +EI + +H N+V
Sbjct: 30 GNKMGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIAS---KGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
L + + +V Y+ G L D+++ L K+ Q +G+++ H
Sbjct: 89 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K NILLD KISDFGL
Sbjct: 149 IHRDIKS-----------------------------------ANILLDEAFTAKISDFGL 173
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + F + G+ Y+APE L RG SDI+S GV+L I+TG D+
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEH 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 141 HSANVLHRDLKP-----------------------------------SNLLLNTTXDLKI 165
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 166 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 223
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVP-WNRLFPNA 282
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 58/266 (21%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
+L + LG G FG+V ++ AVK L+ + E +K L+H +
Sbjct: 15 KLVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKL 69
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID-------GVSY 129
VRL+ V+ + IY++ E++ G L D + S + G+ L +LID G++Y
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKS-----DEGGKVLLPKLIDFSAQIAEGMAY 124
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
K HRDL+ NVL E+++ K
Sbjct: 125 IERKNYIHRDLRAA-----------------------------NVLVSESLM------CK 149
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
I+DFGL+ + + ++ P + APE + N G S++WS G++LY I+T
Sbjct: 150 IADFGLARVIED--NEYTAREGAKFPIKWTAPEAI-NFGCFTIKSNVWSFGILLYEIVTY 206
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPK 273
G +P+ R A + + +G +++P+
Sbjct: 207 GKIPYPGRTNADVMSALSQG-YRMPR 231
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 62
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 63 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 121
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 122 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 146
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 147 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 207 GQLPYSNIN 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 145 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 169
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 170 CDFGLARVADPDH-DHTGFLXEXVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 227
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 286
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 101
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 161 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 185
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 186 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 243
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 244 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 302
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 303 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 341
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 86
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 146 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 170
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 171 CDFGLARVADPDH-DHTGFLXEXVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 228
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 229 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 287
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 288 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 326
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 65
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 66 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 125 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 149
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 210 GQLPYSNIN 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 141 HSANVLHRDLKP-----------------------------------SNLLLNTTXDLKI 165
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 166 XDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 223
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVP-WNRLFPNA 282
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 89
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 148
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 149 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 173
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 174 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 231
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 232 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 290
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 291 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 329
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 141 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 165
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 166 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 223
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 282
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 86
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 146 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 170
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 171 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 228
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 229 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 287
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 288 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 326
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 87
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 146
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 147 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 171
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 172 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 229
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 230 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 288
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 289 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 327
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 78
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 137
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 138 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 162
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 163 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 220
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 221 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 279
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 280 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 318
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 145 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 169
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 170 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 227
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 286
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 65
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 66 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 125 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 149
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 210 GQLPYSNIN 218
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 79
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 139 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 163
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 164 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 221
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 222 NRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 280
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 319
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 79
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 139 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 163
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 164 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 221
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 222 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 280
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 319
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 60
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 61 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 120 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 144
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 205 GQLPYSNIN 213
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 145 HSANVLHRDLKP-----------------------------------SNLLLNTTXDLKI 169
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 170 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 227
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 286
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 87
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 88 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 146
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 147 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 171
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 172 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 232 GQLPYSNIN 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 88
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 89 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 148 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 172
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 173 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 233 GQLPYSNIN 241
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYXQRTLREIKILLRFRHE 85
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 145 HSANVLHRDLKP-----------------------------------SNLLLNTTXDLKI 169
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 170 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 227
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 286
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 58/241 (24%)
Query: 20 RTLGEGNFGKVKF----AQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
R LGEG+FGKV + +G AVK L+ + + K+EI L+ L H +
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYHEH 94
Query: 76 VVRLHEVL--ASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK 133
+++ A + + +V+EYV G L D + + + A+ QQ+ +G++Y H +
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL N+LLD+ +KI DF
Sbjct: 154 HYIHRDLAA-----------------------------------RNVLLDNDRLVKIGDF 178
Query: 194 GLS-ALPQ-----HFRDDGLLHTTCGSPN-YVAPEVLANRGYDGATSDIWSCGVILYVIL 246
GL+ A+P+ R+DG SP + APE L + A SD+WS GV LY +L
Sbjct: 179 GLAKAVPEGHEXYRVREDG------DSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELL 231
Query: 247 T 247
T
Sbjct: 232 T 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 75
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 76 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 121
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ Y +N H + + L SC ++A +L + + L N+L+
Sbjct: 122 LEYSYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-------HRDLAARNVLV 172
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 173 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 229
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 230 LLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 78
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 79 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 124
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ Y +N H + + L SC ++A +L + + L N+L+
Sbjct: 125 LEYSYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-------HRDLAARNVLV 175
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 176 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 232
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 233 LLWEIFT 239
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 75/308 (24%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
L LG+G V + +G FA+K+ N I L+ D RE LK L H N+V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 78 RL---HEVLASKSKIYMVLEYVTGGELF---DKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
+L E ++ K+ +++E+ G L+ ++ ++ L E+E + + ++ G+++
Sbjct: 71 KLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
G+ HR++K N++++ I D + K++
Sbjct: 130 ENGIVHRNIK-----------------------------PGNIMRV--IGEDGQSVYKLT 158
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLA-------NRGYDGATSDIWSCGVILYV 244
DFG + + DD + G+ Y+ P++ ++ GAT D+WS GV Y
Sbjct: 159 DFGAA---RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 245 ILTGYLPFD-----DRNLAVLYQKI--------------------FRGDFKLPKWLSPGA 279
TG LPF RN V+Y+ I + GD + LS G
Sbjct: 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGL 275
Query: 280 QNLLRKIL 287
Q LL +L
Sbjct: 276 QVLLTPVL 283
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 79
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 80 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 125
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ Y +N H + + L SC ++A +L + + L N+L+
Sbjct: 126 LEYSYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-------HRDLAARNVLV 176
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 177 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 233
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 234 LLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 86
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 132
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ Y +N H + + L SC ++A +L + + L N+L+
Sbjct: 133 LEYSYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-------HRDLAARNVLV 183
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 184 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 240
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 241 LLWEIFT 247
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A++ + H + REI L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 145 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 169
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 170 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 227
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 286
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 86
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQAREPPG 132
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ Y +N H + + L SC ++A +L + + L N+L+
Sbjct: 133 LEYSYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-------HRDLAARNVLV 183
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 184 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 240
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 241 LLWEIFT 247
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 136/339 (40%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKCQHLSNDHICYFLYQILRGLKYI 144
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 145 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 169
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 170 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 227
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 286
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + EQ Y P++
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 127
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E L + G
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LQARRPPG 173
Query: 127 VSYCHNKGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ Y +N H + + L SC ++A +L + + L N+L+
Sbjct: 174 LEYSYNPS--HNPEEQLSSKDLVSCAYQVARGMEYLAS-------KKCIHRDLAARNVLV 224
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV
Sbjct: 225 TEDNVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGV 281
Query: 241 ILYVILT 247
+L+ I T
Sbjct: 282 LLWEIFT 288
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 127/325 (39%), Gaps = 85/325 (26%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKI-TDQIKREIATLKLLKHPNVVRLH 80
+G G +G V A D SG A+K L +R +I + RE+ LK ++H NV+ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 81 EVLASKSKI------YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+V S + Y+V+ ++ KI + E + + L Q++ G+ Y H+ G
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAG 146
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
V HRDLK N+ ++ +KI DFG
Sbjct: 147 VVHRDLKP-----------------------------------GNLAVNEDCELKILDFG 171
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+ D + + Y APEV+ + + T DIWS G I+ +LTG F
Sbjct: 172 LAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226
Query: 255 RNLAVLYQKIF------------------------------RGDFK--LPKWLSPGAQNL 282
++ +I R DF P+ SP A +L
Sbjct: 227 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR-ASPQAADL 285
Query: 283 LRKILEPNPVKRITIAGIKADEWFE 307
L K+LE + KR+T A +FE
Sbjct: 286 LEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLAFRHE 83
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 143 HSANVLHRDLKP-----------------------------------SNLLLNTTSDLKI 167
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 168 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 225
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVP-WNRLFPNA 284
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + Q Y P++
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSD 323
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 63/252 (25%)
Query: 18 LGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITD-------QIKREIAT 67
L +G G+FG V K+ D+ AVKIL K+ D + E+A
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDV------AVKIL--------KVVDPTPEQFQAFRNEVAV 85
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDG 126
L+ +H N++ L +K + +V ++ G L+ + + + Q + + +Q G
Sbjct: 86 LRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y H K + HRD+K NI L
Sbjct: 145 MDYLHAKNIIHRDMKS-----------------------------------NNIFLHEGL 169
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD--GATSDIWSCGVILYV 244
+KI DFGL+ + + + GS ++APEV+ + + SD++S G++LY
Sbjct: 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE 229
Query: 245 ILTGYLPFDDRN 256
++TG LP+ N
Sbjct: 230 LMTGELPYSHIN 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 60
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 61 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 120 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 144
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 145 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 205 GQLPYSNIN 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 126/324 (38%), Gaps = 83/324 (25%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKI-TDQIKREIATLKLLKHPNVVRLH 80
+G G +G V A D SG A+K L +R +I + RE+ LK ++H NV+ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 81 EVLASKSKI------YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+V S + Y+V+ ++ KI E + + L Q++ G+ Y H+ G
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
V HRDLK N+ ++ +KI DFG
Sbjct: 165 VVHRDLKP-----------------------------------GNLAVNEDCELKILDFG 189
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+ D + + Y APEV+ + + T DIWS G I+ +LTG F
Sbjct: 190 LAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244
Query: 255 RNLAVLYQKIF------------------------------RGDF-KLPKWLSPGAQNLL 283
++ +I R DF +L SP A +LL
Sbjct: 245 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLL 304
Query: 284 RKILEPNPVKRITIAGIKADEWFE 307
K+LE + KR+T A +FE
Sbjct: 305 EKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 80/339 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RY +GEG +G V A D + + A+K + H + REI L +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLAFRHE 83
Query: 75 NVVRLHEVLASKS----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
N++ +++++ + + K +++ + +L+ K+ L Q++ G+ Y
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
H+ V HRDLK N+LL++ ++KI
Sbjct: 143 HSANVLHRDLKP-----------------------------------SNLLLNTTCDLKI 167
Query: 191 SDFGLS--ALPQHFRDDGLLHTTCGSPNYVAPEVLAN-RGYDGATSDIWSCGVILYVILT 247
DFGL+ A P H G L + Y APE++ N +GY + DIWS G IL +L+
Sbjct: 168 CDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLS 225
Query: 248 G--------YLPFDDRNLAVL------------------YQKIFRGDFKLPKW--LSPGA 279
YL + L +L Y K+P W L P A
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP-WNRLFPNA 284
Query: 280 Q----NLLRKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+LL K+L NP KRI + A + Q Y P++
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSD 323
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 38/245 (15%)
Query: 15 RYELGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIAT 67
R LG+ LGEG FG+V A+ LD P AVK+L K+ ++D I E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEM 86
Query: 68 LKLL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+K++ KH N++ L +Y+++EY ASKG L+E + L
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREYLQARRPPGLEFS 136
Query: 127 VSYCHN--KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
+ HN + + +DL SC ++A +L + + L N+L+
Sbjct: 137 FNPSHNPEEQLSSKDLV----SCAYQVARGMEYLAS-------KKCIHRDLAARNVLVTE 185
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+KI+DFGL+ H D TT G ++APE L +R Y SD+WS GV+L
Sbjct: 186 DNVMKIADFGLARDIHHI--DXXKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLL 242
Query: 243 YVILT 247
+ I T
Sbjct: 243 WEIFT 247
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 60
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++ ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 61 TRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 120 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 144
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 205 GQLPYSNIN 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 127/308 (41%), Gaps = 75/308 (24%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
L LG+G V + +G FA+K+ N I L+ D RE LK L H N+V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 78 RL---HEVLASKSKIYMVLEYVTGGELF---DKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
+L E ++ K+ +++E+ G L+ ++ ++ L E+E + + ++ G+++
Sbjct: 71 KLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
G+ HR++K N++++ I D + K++
Sbjct: 130 ENGIVHRNIK-----------------------------PGNIMRV--IGEDGQSVYKLT 158
Query: 192 DFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLA-------NRGYDGATSDIWSCGVILYV 244
DFG + + DD G+ Y+ P++ ++ GAT D+WS GV Y
Sbjct: 159 DFGAA---RELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 245 ILTGYLPFD-----DRNLAVLYQKI--------------------FRGDFKLPKWLSPGA 279
TG LPF RN V+Y+ I + GD + LS G
Sbjct: 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGL 275
Query: 280 QNLLRKIL 287
Q LL +L
Sbjct: 276 QVLLTPVL 283
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 88
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 89 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 148 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 172
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 173 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 233 GQLPYSNIN 241
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 49/249 (19%)
Query: 14 GRYELGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
G+ +G+ +G G+FG V K+ D+ AVK+L ++ K E+ L+
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQL-QAFKNEVGVLRK 80
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSY 129
+H N++ L ++K ++ +V ++ G L+ + + + + + + +Q G+ Y
Sbjct: 81 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 139
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H K + HRDLK NI L +K
Sbjct: 140 LHAKSIIHRDLKS-----------------------------------NNIFLHEDLTVK 164
Query: 190 ISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEV--LANRGYDGATSDIWSCGVILYVILT 247
I DFGL+ + GS ++APEV + ++ SD+++ G++LY ++T
Sbjct: 165 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
Query: 248 GYLPFDDRN 256
G LP+ + N
Sbjct: 225 GQLPYSNIN 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 72/273 (26%)
Query: 20 RTLGEGNFGKV-KFAQDLDSG---LPFAVKIL-----EKNRIIHLKITDQIKREIATLKL 70
+ +G G FG+V K SG +P A+K L EK R+ L E +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-------EAGIMGQ 102
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID----- 125
H N++RL V++ + ++ EY+ G L DK L+E +G QL+
Sbjct: 103 FSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKF-----LREKDGEFSVLQLVGMLRGI 156
Query: 126 --GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
G+ Y N HRDL NIL++
Sbjct: 157 AAGMKYLANMNYVHRDLAA-----------------------------------RNILVN 181
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGV 240
S K+SDFGLS + + D +TT G + APE ++ R + A SD+WS G+
Sbjct: 182 SNLVCKVSDFGLSRVLED--DPEATYTTSGGKIPIRWTAPEAISYRKFTSA-SDVWSFGI 238
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRGDFKLP 272
+++ ++T G P+ + + + + I G F+LP
Sbjct: 239 VMWEVMTYGERPYWELSNHEVMKAINDG-FRLP 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 54/249 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLL 71
+ +YE +G+G FG+V A+ +G A+K +L +N IT REI L+LL
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT--ALREIKILQLL 74
Query: 72 KHPNVVRLHEVLASKS--------KIYMVLEYVTG--GELFDKIASKGRLQEAEGRKLFQ 121
KH NVV L E+ +K+ IY+V ++ L + K L E +++ Q
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQ 132
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
L++G+ Y H + HRD+K N+L
Sbjct: 133 MLLNGLYYIHRNKILHRDMKA-----------------------------------ANVL 157
Query: 182 LDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
+ G +K++DFGL+ +L ++ + + + + Y PE+L G D+W
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGA 216
Query: 239 GVILYVILT 247
G I+ + T
Sbjct: 217 GCIMAEMWT 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 58/241 (24%)
Query: 20 RTLGEGNFGKVKF----AQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
R LGEG+FGKV + +G AVK L++ L+ Q REI L+ L H +
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ--REIEILRTLYHEH 72
Query: 76 VVRLHEVLASKSK--IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK 133
+V+ + + + +V+EYV G L D + + + A+ QQ+ +G++Y H +
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HR L N+LLD+ +KI DF
Sbjct: 132 HYIHRALAA-----------------------------------RNVLLDNDRLVKIGDF 156
Query: 194 GLS-ALPQ-----HFRDDGLLHTTCGSPN-YVAPEVLANRGYDGATSDIWSCGVILYVIL 246
GL+ A+P+ R+DG SP + APE L + A SD+WS GV LY +L
Sbjct: 157 GLAKAVPEGHEYYRVREDG------DSPVFWYAPECLKECKFYYA-SDVWSFGVTLYELL 209
Query: 247 T 247
T
Sbjct: 210 T 210
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 54/249 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLL 71
+ +YE +G+G FG+V A+ +G A+K +L +N IT REI L+LL
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT--ALREIKILQLL 73
Query: 72 KHPNVVRLHEVLASKS--------KIYMVLEYVTG--GELFDKIASKGRLQEAEGRKLFQ 121
KH NVV L E+ +K+ IY+V ++ L + K L E +++ Q
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQ 131
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
L++G+ Y H + HRD+K N+L
Sbjct: 132 MLLNGLYYIHRNKILHRDMKA-----------------------------------ANVL 156
Query: 182 LDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
+ G +K++DFGL+ +L ++ + + + + Y PE+L G D+W
Sbjct: 157 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGA 215
Query: 239 GVILYVILT 247
G I+ + T
Sbjct: 216 GCIMAEMWT 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 58/241 (24%)
Query: 20 RTLGEGNFGKVKF----AQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
R LGEG+FGKV + +G AVK L++ L+ Q REI L+ L H +
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ--REIEILRTLYHEH 71
Query: 76 VVRLHEVLASKSK--IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK 133
+V+ + + + +V+EYV G L D + + + A+ QQ+ +G++Y H +
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HR L N+LLD+ +KI DF
Sbjct: 131 HYIHRALAA-----------------------------------RNVLLDNDRLVKIGDF 155
Query: 194 GLS-ALPQ-----HFRDDGLLHTTCGSPN-YVAPEVLANRGYDGATSDIWSCGVILYVIL 246
GL+ A+P+ R+DG SP + APE L + A SD+WS GV LY +L
Sbjct: 156 GLAKAVPEGHEYYRVREDG------DSPVFWYAPECLKECKFYYA-SDVWSFGVTLYELL 208
Query: 247 T 247
T
Sbjct: 209 T 209
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 54/249 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLL 71
+ +YE +G+G FG+V A+ +G A+K +L +N IT REI L+LL
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT--ALREIKILQLL 74
Query: 72 KHPNVVRLHEVLASKS--------KIYMVLEYVTG--GELFDKIASKGRLQEAEGRKLFQ 121
KH NVV L E+ +K+ IY+V ++ L + K L E +++ Q
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQ 132
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
L++G+ Y H + HRD+K N+L
Sbjct: 133 MLLNGLYYIHRNKILHRDMKA-----------------------------------ANVL 157
Query: 182 LDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
+ G +K++DFGL+ +L ++ + + + + Y PE+L G D+W
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGA 216
Query: 239 GVILYVILT 247
G I+ + T
Sbjct: 217 GCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 54/249 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLL 71
+ +YE +G+G FG+V A+ +G A+K +L +N IT REI L+LL
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT--ALREIKILQLL 74
Query: 72 KHPNVVRLHEVLAS--------KSKIYMVLEYVTG--GELFDKIASKGRLQEAEGRKLFQ 121
KH NVV L E+ + K+ IY+V ++ L + K L E +++ Q
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQ 132
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
L++G+ Y H + HRD+K N+L
Sbjct: 133 MLLNGLYYIHRNKILHRDMKA-----------------------------------ANVL 157
Query: 182 LDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
+ G +K++DFGL+ +L ++ + + + + Y PE+L G D+W
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGA 216
Query: 239 GVILYVILT 247
G I+ + T
Sbjct: 217 GCIMAEMWT 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 81/310 (26%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR--EIATLKLLKHPNVVRL 79
LG G+FG+V +D +G AVK K+ ++ R E+ L P +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK----------KVRLEVFRAEELMACAGLTSPRIVPL 150
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ + + + +E + GG L + +G L E Q ++G+ Y H++ + H D
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG-NIKISDFGLSAL 198
+K +N+LL S G + + DFG +
Sbjct: 211 VKA-----------------------------------DNVLLSSDGSHAALCDFGHAVC 235
Query: 199 PQHFRDDGLLHTTC------GSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
+ DGL + G+ ++APEV+ R D A D+WS ++ +L G P
Sbjct: 236 ---LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD-AKVDVWSSCCMMLHMLNGCHP- 290
Query: 253 DDRNLAVLYQKIFRGDF------------KLPKWLSPGAQNLLRKILEPNPVKRITIA-- 298
+ + FRG ++P +P +++ L P+ R++ A
Sbjct: 291 --------WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
Query: 299 GIKADEWFEQ 308
G K + +Q
Sbjct: 343 GGKVNRALQQ 352
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG G FG VK+ + A+K++++ + D+ E + L H +V+L
Sbjct: 10 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 64
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
+ V + I+++ EY+ G L + + + R Q + ++ + + + + Y +K HR
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L++ +G +K+SDFGLS
Sbjct: 125 DLAA-----------------------------------RNCLVNDQGVVKVSDFGLS-- 147
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
++ DD ++ GS + PEVL + + SDIW+ GV+++ I + G +P++
Sbjct: 148 -RYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG G FG VK+ + A+K++++ + D+ E + L H +V+L
Sbjct: 14 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 68
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
+ V + I+++ EY+ G L + + + R Q + ++ + + + + Y +K HR
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L++ +G +K+SDFGLS
Sbjct: 129 DLAA-----------------------------------RNCLVNDQGVVKVSDFGLS-- 151
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
++ DD ++ GS + PEVL + + SDIW+ GV+++ I + G +P++
Sbjct: 152 -RYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 68/256 (26%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKR----EIAT 67
R + + +G G+ G+V + + G +P A+K L+ T++ +R E +
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG------YTERQRRDFLSEASI 103
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID-- 125
+ HPN++RL V+ +V EY+ G L D L+ +G+ QL+
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTF-----LRTHDGQFTIMQLVGML 157
Query: 126 -----GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
G+ Y + G HRDL N+
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAA-----------------------------------RNV 182
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWS 237
L+DS K+SDFGLS + + D +TT G + APE +A R + A SD+WS
Sbjct: 183 LVDSNLVCKVSDFGLSRVLED--DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA-SDVWS 239
Query: 238 CGVILYVILT-GYLPF 252
GV+++ +L G P+
Sbjct: 240 FGVVMWEVLAYGERPY 255
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG G FG VK+ + A+K++++ + D+ E + L H +V+L
Sbjct: 15 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 69
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
+ V + I+++ EY+ G L + + + R Q + ++ + + + + Y +K HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L++ +G +K+SDFGLS
Sbjct: 130 DLAA-----------------------------------RNCLVNDQGVVKVSDFGLS-- 152
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
++ DD ++ GS + PEVL + + SDIW+ GV+++ I + G +P++
Sbjct: 153 -RYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 58/246 (23%)
Query: 20 RTLGEGNFGKVKFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKR----EIATLKLLK 72
R +G G FG+V + G LP A+K L+ + T++ +R E + +
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK------VGYTEKQRRDFLGEASIMGQFD 81
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYC 130
HPN++ L V+ + +V EY+ G L D K G+ + + + + G+ Y
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 131 HNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKI 190
+ G HRDL NIL++S K+
Sbjct: 141 SDMGYVHRDLAA-----------------------------------RNILINSNLVCKV 165
Query: 191 SDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILY-VIL 246
SDFGLS + + D +TT G + APE +A R + A SD+WS G++++ V+
Sbjct: 166 SDFGLSRVLED--DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA-SDVWSYGIVMWEVVS 222
Query: 247 TGYLPF 252
G P+
Sbjct: 223 YGERPY 228
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 122/315 (38%), Gaps = 57/315 (18%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D G+ AVK L + H K + RE+ LK
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK---RAYRELVLLKC 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHME--LDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ + + ++ + Y APEV+ GY A DIWS G I+
Sbjct: 162 DCTLKILDFGLA---RTACTNFMMTPYVVTRYYRAPEVILGMGY-AANVDIWSVGCIMGE 217
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
++ G + F + + K+ Q +R +E P GIK +E
Sbjct: 218 LVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRP----KYPGIKFEE 273
Query: 305 WFEQDYTPANPDDDE 319
F P+ + D+
Sbjct: 274 LFPDWIFPSESERDK 288
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG G FG VK+ + A+K++++ + D+ E + L H +V+L
Sbjct: 30 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 84
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
+ V + I+++ EY+ G L + + + R Q + ++ + + + + Y +K HR
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L++ +G +K+SDFGLS
Sbjct: 145 DLAA-----------------------------------RNCLVNDQGVVKVSDFGLS-- 167
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
++ DD ++ GS + PEVL + + SDIW+ GV+++ I + G +P++
Sbjct: 168 -RYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG G FG VK+ + A+K++++ + D+ E + L H +V+L
Sbjct: 21 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 75
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
+ V + I+++ EY+ G L + + + R Q + ++ + + + + Y +K HR
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L++ +G +K+SDFGLS
Sbjct: 136 DLAA-----------------------------------RNCLVNDQGVVKVSDFGLS-- 158
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
++ DD ++ GS + PEVL + + SDIW+ GV+++ I + G +P++
Sbjct: 159 -RYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 58/241 (24%)
Query: 20 RTLGEGNFGKVKF----AQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
R LGEG+FGKV + +G AVK L+ + + K+EI L+ L H +
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLYHEH 77
Query: 76 VVRLHEVLASKSK--IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK 133
+++ + + + +V+EYV G L D + + + A+ QQ+ +G++Y H++
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HR+L N+LLD+ +KI DF
Sbjct: 137 HYIHRNLAA-----------------------------------RNVLLDNDRLVKIGDF 161
Query: 194 GLS-ALPQ-----HFRDDGLLHTTCGSPN-YVAPEVLANRGYDGATSDIWSCGVILYVIL 246
GL+ A+P+ R+DG SP + APE L + A SD+WS GV LY +L
Sbjct: 162 GLAKAVPEGHEYYRVREDG------DSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELL 214
Query: 247 T 247
T
Sbjct: 215 T 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 64/254 (25%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKR----EIAT 67
R + + +G G+ G+V + + G +P A+K L+ T++ +R E +
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG------YTERQRRDFLSEASI 103
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID-- 125
+ HPN++RL V+ +V EY+ G L D L+ +G+ QL+
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTF-----LRTHDGQFTIMQLVGML 157
Query: 126 -----GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
G+ Y + G HRDL N+
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAA-----------------------------------RNV 182
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCG 239
L+DS K+SDFGLS + + D T P + APE +A R + A SD+WS G
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSA-SDVWSFG 241
Query: 240 VILYVILT-GYLPF 252
V+++ +L G P+
Sbjct: 242 VVMWEVLAYGERPY 255
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 47/234 (20%)
Query: 22 LGEGNFGKVKFAQ----DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
LG+GNFG V+ + ++G AVK L+ + + +REI LK L +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---DFQREIQILKALHSDFIV 71
Query: 78 RLHEVL--ASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+ V + ++ +V+EY+ G L D + + RL + Q+ G+ Y ++
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL NIL++S+ ++KI+DFG
Sbjct: 132 CVHRDLAA-----------------------------------RNILVESEAHVKIADFG 156
Query: 195 LSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
L+ L +D ++ SP + APE L++ + SD+WS GV+LY + T
Sbjct: 157 LAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFT 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 55/257 (21%)
Query: 20 RTLGEGNFGKVKFA----QDLDSGLPFAVKILEK----NRIIHLKITDQIKREIATLKLL 71
R LGEG+FGKV+ + ++G AVK L+ N I L K+EI L+ L
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL------KKEIEILRNL 80
Query: 72 KHPNVVRLHEVLASK--SKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVS 128
H N+V+ + + I +++E++ G L + + +K ++ + K Q+ G+
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
Y ++ HRDL N+L++S+ +
Sbjct: 141 YLGSRQYVHRDLAA-----------------------------------RNVLVESEHQV 165
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNY-VAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ + ++ + SP + APE L + A SD+WS GV L+ +LT
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSFGVTLHELLT 224
Query: 248 GYLPFDDRNLAVLYQKI 264
Y D +A+ + I
Sbjct: 225 -YCDSDSSPMALFLKMI 240
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKHPN 75
R +G G FG+V + LP + + + + T++ +R E + + HPN
Sbjct: 49 RVIGAGEFGEVCSGR---LKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNK 133
VV L V+ + +V+E++ G L D K G+ + + + + G+ Y +
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
G HRDL NIL++S K+SDF
Sbjct: 165 GYVHRDLAA-----------------------------------RNILVNSNLVCKVSDF 189
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
GLS + + D ++TT G + APE + R + A SD+WS G++++ +++ G
Sbjct: 190 GLSRVIED--DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA-SDVWSYGIVMWEVMSYGE 246
Query: 250 LPFDDRNLAVLYQKIFRGDFKLP 272
P+ D + + + I G ++LP
Sbjct: 247 RPYWDMSNQDVIKAIEEG-YRLP 268
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 95/233 (40%), Gaps = 49/233 (21%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL-- 79
+G G +G V A D +G A+K L + L + RE+ LK ++H NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAYRELRLLKHMRHENVIGLLD 91
Query: 80 ----HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
E L + Y+V+ ++ G K+ +L E + L Q++ G+ Y H G+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRDLK N+ ++ +KI DFGL
Sbjct: 150 IHRDLKP-----------------------------------GNLAVNEDCELKILDFGL 174
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
+ + D + + Y APEV+ N T DIWS G I+ ++TG
Sbjct: 175 AR-----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 115/298 (38%), Gaps = 79/298 (26%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR--EIATLKLLKHPNVVRL 79
LG G+FG+V +D +G AVK K+ ++ R E+ L P +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK----------KVRLEVFRAEELMACAGLTSPRIVPL 131
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
+ + + + +E + GG L + +G L E Q ++G+ Y H++ + H D
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG-NIKISDFGLSAL 198
+K +N+LL S G + + DFG +
Sbjct: 192 VKA-----------------------------------DNVLLSSDGSHAALCDFGHAVC 216
Query: 199 PQHFRDDGLLHTTC------GSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPF 252
+ DGL G+ ++APEV+ R D A D+WS ++ +L G P
Sbjct: 217 ---LQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD-AKVDVWSSCCMMLHMLNGCHP- 271
Query: 253 DDRNLAVLYQKIFRGDF------------KLPKWLSPGAQNLLRKILEPNPVKRITIA 298
+ + FRG ++P +P +++ L P+ R++ A
Sbjct: 272 --------WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAA 321
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 53/292 (18%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKIL----EKNRIIHLKITDQIKREIATLKLLK 72
E + +G+G FG V + + A+K L + ++ + +RE+ + L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCH 131
HPN+V+L+ ++ + + MV+E+V G+L+ ++ K ++ + +L + G+ Y
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 132 NKG--VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI- 188
N+ + HRDL+ + +FL + LD +
Sbjct: 140 NQNPPIVHRDLR-----------SPNIFLQS---------------------LDENAPVC 167
Query: 189 -KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVL-ANRGYDGATSDIWSCGVILYVIL 246
K++DFGLS H GLL G+ ++APE + A +D +S +ILY IL
Sbjct: 168 AKVADFGLSQQSVH-SVSGLL----GNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 247 TGYLPFDDRNLA-VLYQKIFRGDF---KLPKWLSPGAQNLLRKILEPNPVKR 294
TG PFD+ + + + + R + +P+ P +N++ +P KR
Sbjct: 223 TGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 50/239 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ LG G FG VK+ + A+K++++ + D+ E + L H +V+L
Sbjct: 15 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 69
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
+ V + I+++ EY+ G L + + + R Q + ++ + + + + Y +K HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L++ +G +K+SDFGLS
Sbjct: 130 DLAA-----------------------------------RNCLVNDQGVVKVSDFGLS-- 152
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
++ DD + GS + PEVL + + SDIW+ GV+++ I + G +P++
Sbjct: 153 -RYVLDDEYTSSR-GSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 55/257 (21%)
Query: 20 RTLGEGNFGKVKFA----QDLDSGLPFAVKILEK----NRIIHLKITDQIKREIATLKLL 71
R LGEG+FGKV+ + ++G AVK L+ N I L K+EI L+ L
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL------KKEIEILRNL 68
Query: 72 KHPNVVRLHEVLASK--SKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVS 128
H N+V+ + + I +++E++ G L + + +K ++ + K Q+ G+
Sbjct: 69 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 128
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
Y ++ HRDL N+L++S+ +
Sbjct: 129 YLGSRQYVHRDLAA-----------------------------------RNVLVESEHQV 153
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSPNY-VAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI DFGL+ + ++ + SP + APE L + A SD+WS GV L+ +LT
Sbjct: 154 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSFGVTLHELLT 212
Query: 248 GYLPFDDRNLAVLYQKI 264
Y D +A+ + I
Sbjct: 213 -YCDSDSSPMALFLKMI 228
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 58/241 (24%)
Query: 20 RTLGEGNFGKVKF----AQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
R LGEG+FGKV + +G AVK L+ + + K+EI L+ L H +
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLYHEH 77
Query: 76 VVRLHEVLASKSK--IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK 133
+++ + + + +V+EYV G L D + + + A+ QQ+ +G++Y H +
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HR+L N+LLD+ +KI DF
Sbjct: 137 HYIHRNLAA-----------------------------------RNVLLDNDRLVKIGDF 161
Query: 194 GLS-ALPQ-----HFRDDGLLHTTCGSPN-YVAPEVLANRGYDGATSDIWSCGVILYVIL 246
GL+ A+P+ R+DG SP + APE L + A SD+WS GV LY +L
Sbjct: 162 GLAKAVPEGHEYYRVREDG------DSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELL 214
Query: 247 T 247
T
Sbjct: 215 T 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 57/256 (22%)
Query: 10 GMRLGRYELG-------RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK 62
G+ G +E+ + LG G FG VK+ + A+K++++ + D+
Sbjct: 13 GLGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFI 67
Query: 63 REIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQ 121
E + L H +V+L+ V + I+++ EY+ G L + + + R Q + ++ +
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
+ + + Y +K HRDL N L
Sbjct: 128 DVCEAMEYLESKQFLHRDLAA-----------------------------------RNCL 152
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSC 238
++ +G +K+SDFGLS ++ DD ++ GS + PEVL + + SDIW+
Sbjct: 153 VNDQGVVKVSDFGLS---RYVLDDEET-SSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAF 207
Query: 239 GVILYVILT-GYLPFD 253
GV+++ I + G +P++
Sbjct: 208 GVLMWEIYSLGKMPYE 223
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 53/282 (18%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
+ +G G FG V L+ A+K +++ + D E + L HP +V+L
Sbjct: 33 QEIGSGQFGLVHLGYWLNKD-KVAIKTIKEGSMSE----DDFIEEAEVMMKLSHPKLVQL 87
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGR-KLFQQLIDGVSYCHNKGVFHR 138
+ V ++ I +V E++ G L D + ++ L AE + + +G++Y V HR
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
DL N L+ IK+SDFG++
Sbjct: 148 DLAA-----------------------------------RNCLVGENQVIKVSDFGMT-- 170
Query: 199 PQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDD 254
F D ++ G+ + +PEV + Y + SD+WS GV+++ + + G +P+++
Sbjct: 171 --RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYEN 227
Query: 255 RNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
R+ + + + I G F+L P+ S ++ + P R
Sbjct: 228 RSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDR 268
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 91/240 (37%), Gaps = 41/240 (17%)
Query: 19 GRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVR 78
G GEG FG V + +++ K+ I ++ Q +EI +H N+V
Sbjct: 27 GNKXGEGGFGVV-YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIAS---KGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
L + + +V Y G L D+++ L K+ Q +G+++ H
Sbjct: 86 LLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
HRD+K NILLD KISDFGL
Sbjct: 146 IHRDIKSA-----------------------------------NILLDEAFTAKISDFGL 170
Query: 196 SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDR 255
+ + F G+ Y APE L RG SDI+S GV+L I+TG D+
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAVDEH 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 20 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 136 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 160
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 161 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 217
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 218 GERPYWEMSNQDVIKAVDEG-YRLP 241
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 131/327 (40%), Gaps = 72/327 (22%)
Query: 10 GMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATL 68
G L +E + LG G FG V A++ +A+K I NR + +++ RE+ L
Sbjct: 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL---AREKVMREVKAL 57
Query: 69 KLLKHPNVVRLHEVLASKSK------------IYMVLEYVTGGELFDKIASKGRLQEAEG 116
L+HP +VR K+ +Y+ ++ L D + + ++E E
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 117 R---KLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFN 173
+F Q+ + V + H+KG+ HRDLK
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKP------------------------------- 146
Query: 174 VLQLENILLDSKGNIKISDFGL-SALPQHFRDDGLL--------HT-TCGSPNYVAPEVL 223
NI +K+ DFGL +A+ Q + +L HT G+ Y++PE +
Sbjct: 147 ----SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Query: 224 ANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLS---PGAQ 280
Y DI+S G+IL+ +L PF + V R + K P + P
Sbjct: 203 HGNSYSHKV-DIFSLGLILFELL---YPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEY 257
Query: 281 NLLRKILEPNPVKRITIAGIKADEWFE 307
+++ +L P+P++R I + FE
Sbjct: 258 VMVQDMLSPSPMERPEAINIIENAVFE 284
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 59/291 (20%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
+L + LG G FG+V A + AVK ++ + + E +K L+H +
Sbjct: 185 KLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKL 239
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQ-QLIDGVSYCHNKG 134
V+LH V+ +K IY++ E++ G L D + S +G Q F Q+ +G+++ +
Sbjct: 240 VKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL+ NIL+ + KI+DFG
Sbjct: 299 YIHRDLRAA-----------------------------------NILVSASLVCKIADFG 323
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
L+ + F + APE + N G SD+WS G++L I+T G +P+
Sbjct: 324 LARVGAKF-----------PIKWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYP 371
Query: 254 DRNLAVLYQKIFRGDFKLPKWLSPGAQ--NLLRKILEPNPVKRITIAGIKA 302
+ + + + RG +++P+ + + N++ + + P +R T I++
Sbjct: 372 GMSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 421
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 30 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 84
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 85 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 144 LRAA-----------------------------------NILVSDTLSCKIADFGLARLI 168
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 169 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 225
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 226 PEVIQNLERG 235
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 29 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 83
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 84 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 143 LRAA-----------------------------------NILVSDTLSCKIADFGLARLI 167
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 168 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 224
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 225 PEVIQNLERG 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGFVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 37 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 153 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 177
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 178 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 234
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 235 GERPYWEMSNQDVIKAVDEG-YRLP 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 27 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 81
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 82 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 141 LRAA-----------------------------------NILVSDTLSCKIADFGLARLI 165
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 166 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 222
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 223 PEVIQNLERG 232
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 55/294 (18%)
Query: 10 GMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
+ + +L +T+G+G FG V G AVK ++ + + E + +
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMT 241
Query: 70 LLKHPNVVRLHEVLAS-KSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKLFQQLIDG 126
L+H N+V+L V+ K +Y+V EY+ G L D + S+GR L K + +
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y HRDL N+L+
Sbjct: 302 MEYLEGNNFVHRDLAA-----------------------------------RNVLVSEDN 326
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
K+SDFGL+ +D G L + APE L + + SD+WS G++L+ I
Sbjct: 327 VAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFS-TKSDVWSFGILLWEIY 380
Query: 247 T-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKRITI 297
+ G +P+ L + ++ +G +K+ P P ++++ + R T
Sbjct: 381 SFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 23 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 77
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 78 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 137 LRA-----------------------------------ANILVSDTLSCKIADFGLARLI 161
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 162 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 218
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 219 PEVIQNLERG 228
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 135 LRAA-----------------------------------NILVSDTLSCKIADFGLARLI 159
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 160 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 217 PEVIQNLERG 226
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 22 LGEGNFGKVKFAQ----DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
LG+GNFG V+ + ++G AVK L+ + + +REI LK L +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---DFQREIQILKALHSDFIV 74
Query: 78 RLHEVL--ASKSKIYMVLEYVTGGELFDKIA-SKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+ V + + +V+EY+ G L D + + RL + Q+ G+ Y ++
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL NIL++S+ ++KI+DFG
Sbjct: 135 CVHRDLAA-----------------------------------RNILVESEAHVKIADFG 159
Query: 195 LSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
L+ L +D ++ SP + APE L++ + SD+WS GV+LY + T
Sbjct: 160 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFT 212
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 47 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 163 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 187
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 188 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 244
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 245 GERPYWEMSNQDVIKAVDEG-YRLP 268
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 53/263 (20%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
+L + LG G FG+V A + AVK ++ + + E +K L+H +
Sbjct: 18 KLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKL 72
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQ-QLIDGVSYCHNKG 134
V+LH V+ +K IY++ E++ G L D + S +G Q F Q+ +G+++ +
Sbjct: 73 VKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL+ NIL+ + KI+DFG
Sbjct: 132 YIHRDLRAA-----------------------------------NILVSASLVCKIADFG 156
Query: 195 LSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYL 250
L+ + +D G+ + APE + N G SD+WS G++L I+T G +
Sbjct: 157 LARV----IEDNEYTAREGAKFPIKWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRI 211
Query: 251 PFDDRNLAVLYQKIFRGDFKLPK 273
P+ + + + + RG +++P+
Sbjct: 212 PYPGMSNPEVIRALERG-YRMPR 233
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 22 LGEGNFGKVKFAQ----DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
LG+GNFG V+ + ++G AVK L+ + + +REI LK L +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---DFQREIQILKALHSDFIV 87
Query: 78 RLHEVL--ASKSKIYMVLEYVTGGELFDKIA-SKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+ V + + +V+EY+ G L D + + RL + Q+ G+ Y ++
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL NIL++S+ ++KI+DFG
Sbjct: 148 CVHRDLAA-----------------------------------RNILVESEAHVKIADFG 172
Query: 195 LSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
L+ L +D ++ SP + APE L++ + SD+WS GV+LY + T
Sbjct: 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFT 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 22 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 76
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 77 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 136 LRA-----------------------------------ANILVSDTLSCKIADFGLARLI 160
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 161 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 217
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 218 PEVIQNLERG 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 22 LGEGNFGKVKFAQ----DLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
LG+GNFG V+ + ++G AVK L+ + + +REI LK L +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---DFQREIQILKALHSDFIV 75
Query: 78 RLHEVL--ASKSKIYMVLEYVTGGELFDKIA-SKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
+ V + + +V+EY+ G L D + + RL + Q+ G+ Y ++
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL NIL++S+ ++KI+DFG
Sbjct: 136 CVHRDLAA-----------------------------------RNILVESEAHVKIADFG 160
Query: 195 LSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
L+ L +D ++ SP + APE L++ + SD+WS GV+LY + T
Sbjct: 161 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFT 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D +TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MKIADFGLARDINNI--DYYKNTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MKIADFGLARDINNI--DXXKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 78/267 (29%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK---------R 63
L +YEL + LG+G +G V + D +G AVK KI D + R
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK----------KIFDAFQNSTDAQRTFR 57
Query: 64 EIATL-KLLKHPNVVRLHEVLASKSK--IYMVLEYVTGGELFDKIASKGRLQEAEGRKLF 120
EI L +L H N+V L VL + + +Y+V +Y+ + L+ + +
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVV 115
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
QLI + Y H+ G+ HRD+K NI
Sbjct: 116 YQLIKVIKYLHSGGLLHRDMKP-----------------------------------SNI 140
Query: 181 LLDSKGNIKISDFGLS-----------ALP-------QHFRDDG-LLHTTCGSPNYVAPE 221
LL+++ ++K++DFGLS +P ++F DD +L + Y APE
Sbjct: 141 LLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPE 200
Query: 222 VLANRGYDGATSDIWSCGVILYVILTG 248
+L D+WS G IL IL G
Sbjct: 201 ILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 135 LRA-----------------------------------ANILVSDTLSCKIADFGLARLI 159
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 160 ED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 217 PEVIQNLERG 226
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 53/292 (18%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKIL----EKNRIIHLKITDQIKREIATLKLLK 72
E + +G+G FG V + + A+K L + ++ + +RE+ + L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCH 131
HPN+V+L+ ++ + + MV+E+V G+L+ ++ K ++ + +L + G+ Y
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 132 NKG--VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI- 188
N+ + HRDL+ + +FL + LD +
Sbjct: 140 NQNPPIVHRDLR-----------SPNIFLQS---------------------LDENAPVC 167
Query: 189 -KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVL-ANRGYDGATSDIWSCGVILYVIL 246
K++DFG S H GLL G+ ++APE + A +D +S +ILY IL
Sbjct: 168 AKVADFGTSQQSVH-SVSGLL----GNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 247 TGYLPFDDRNLA-VLYQKIFRGDF---KLPKWLSPGAQNLLRKILEPNPVKR 294
TG PFD+ + + + + R + +P+ P +N++ +P KR
Sbjct: 223 TGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 52/252 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 31 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 85
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 86 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 145 LRAA-----------------------------------NILVSDTLSCKIADFGLARL- 168
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE + N G SD+WS G++L I+T G +P+
Sbjct: 169 ---IEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 224
Query: 256 NLAVLYQKIFRG 267
+ Q + RG
Sbjct: 225 TNPEVIQNLERG 236
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G FG V L+ A+K + + + + E + L HP +V+L+
Sbjct: 15 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYG 69
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGR-KLFQQLIDGVSYCHNKGVFHRDL 140
V ++ I +V E++ G L D + ++ L AE + + +G++Y V HRDL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDL 129
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
N L+ IK+SDFG++
Sbjct: 130 AA-----------------------------------RNCLVGENQVIKVSDFGMT---- 150
Query: 201 HFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRN 256
F D ++ G+ + +PEV + Y + SD+WS GV+++ + + G +P+++R+
Sbjct: 151 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRS 209
Query: 257 LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
+ + + I G F+L P+ S ++ + P R
Sbjct: 210 NSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDR 248
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 53/263 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKHPN 75
+ +G G FG+V + +P +I + + TD+ +R E + + HPN
Sbjct: 35 KVIGVGEFGEVCSGR---LKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNK 133
++ L V+ + ++ EY+ G L D K GR + + + + G+ Y +
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL NIL++S K+SDF
Sbjct: 151 SAVHRDLAA-----------------------------------RNILVNSNLVCKVSDF 175
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
G+S + + D +TT G + APE +A R + A SD+WS G++++ +++ G
Sbjct: 176 GMSRVLED--DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGE 232
Query: 250 LPFDDRNLAVLYQKIFRGDFKLP 272
P+ D + + + I G ++LP
Sbjct: 233 RPYWDMSNQDVIKAIEEG-YRLP 254
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 52/252 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 27 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 81
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 82 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 141 LRAA-----------------------------------NILVSDTLSCKIADFGLARL- 164
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE + N G SD+WS G++L I+T G +P+
Sbjct: 165 ---IEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
Query: 256 NLAVLYQKIFRG 267
+ Q + RG
Sbjct: 221 TNPEVIQNLERG 232
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 52/252 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 26 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 81 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 140 LRAA-----------------------------------NILVSDTLSCKIADFGLARLI 164
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+ D G+ + APE + N G SD+WS G++L I+T G +P+
Sbjct: 165 E----DNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 219
Query: 256 NLAVLYQKIFRG 267
+ Q + RG
Sbjct: 220 TNPEVIQNLERG 231
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 52/252 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 135 LRA-----------------------------------ANILVSDTLSCKIADFGLARLI 159
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+ D G+ + APE + N G SD+WS G++L I+T G +P+
Sbjct: 160 E----DNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 256 NLAVLYQKIFRG 267
+ Q + RG
Sbjct: 215 TNPEVIQNLERG 226
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 46/246 (18%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRD----DGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI+DFGL+ RD D TT G ++APE L +R Y SD+WS GV+
Sbjct: 196 MKIADFGLA------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVL 248
Query: 242 LYVILT 247
++ I T
Sbjct: 249 MWEIFT 254
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 53/292 (18%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKIL----EKNRIIHLKITDQIKREIATLKLLK 72
E + +G+G FG V + + A+K L + ++ + +RE+ + L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCH 131
HPN+V+L+ ++ + + MV+E+V G+L+ ++ K ++ + +L + G+ Y
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 132 NKG--VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI- 188
N+ + HRDL+ + +FL + LD +
Sbjct: 140 NQNPPIVHRDLR-----------SPNIFLQS---------------------LDENAPVC 167
Query: 189 -KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVL-ANRGYDGATSDIWSCGVILYVIL 246
K++DF LS H GLL G+ ++APE + A +D +S +ILY IL
Sbjct: 168 AKVADFSLSQQSVH-SVSGLL----GNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 247 TGYLPFDDRNLA-VLYQKIFRGDF---KLPKWLSPGAQNLLRKILEPNPVKR 294
TG PFD+ + + + + R + +P+ P +N++ +P KR
Sbjct: 223 TGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G FG V L+ A+K + + + + E + L HP +V+L+
Sbjct: 13 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYG 67
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGR-KLFQQLIDGVSYCHNKGVFHRDL 140
V ++ I +V E++ G L D + ++ L AE + + +G++Y V HRDL
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
N L+ IK+SDFG++
Sbjct: 128 AA-----------------------------------RNCLVGENQVIKVSDFGMT---- 148
Query: 201 HFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRN 256
F D ++ G+ + +PEV + Y + SD+WS GV+++ + + G +P+++R+
Sbjct: 149 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRS 207
Query: 257 LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
+ + + I G F+L P+ S ++ + P R
Sbjct: 208 NSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDR 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 133/354 (37%), Gaps = 95/354 (26%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLKH 73
++L LGEG +G V A +G A+K +E + L+ REI LK KH
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 74 PNVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
N++ + + S ++Y++ E + ++ S L + + Q + V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
H V HRDLK N+L++S ++
Sbjct: 127 VLHGSNVIHRDLKP-----------------------------------SNLLINSNCDL 151
Query: 189 KISDFGLSALPQHFRDDGLLHT--TCGSPNYV------APEVLANRGYDGATSDIWSCGV 240
K+ DFGL+ + D T G YV APEV+ D+WSCG
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 241 IL------------------YVILTGYL--PFDDRNLAVLYQKIFRGDFK-LPKW----- 274
IL +++ G + P D +L + R K LP +
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 275 ------LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY--TPANPDDDEE 320
++P +LL+++L +P KRIT A E E Y T +P+D+ E
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRIT-----AKEALEHPYLQTYHDPNDEPE 320
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 52/247 (21%)
Query: 10 GMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
+ + +L +T+G+G FG V G AVK ++ + + E + +
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMT 54
Query: 70 LLKHPNVVRLHEVLAS-KSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKLFQQLIDG 126
L+H N+V+L V+ K +Y+V EY+ G L D + S+GR L K + +
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y HRDL N+L+
Sbjct: 115 MEYLEGNNFVHRDLAA-----------------------------------RNVLVSEDN 139
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
K+SDFGL+ +D G L + APE L + + SD+WS G++L+ I
Sbjct: 140 VAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFS-TKSDVWSFGILLWEIY 193
Query: 247 T-GYLPF 252
+ G +P+
Sbjct: 194 SFGRVPY 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G FG V L+ A+K + + + + E + L HP +V+L+
Sbjct: 15 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYG 69
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGR-KLFQQLIDGVSYCHNKGVFHRDL 140
V ++ I +V E++ G L D + ++ L AE + + +G++Y V HRDL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 129
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
N L+ IK+SDFG++
Sbjct: 130 AA-----------------------------------RNCLVGENQVIKVSDFGMT---- 150
Query: 201 HFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRN 256
F D ++ G+ + +PEV + Y + SD+WS GV+++ + + G +P+++R+
Sbjct: 151 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRS 209
Query: 257 LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
+ + + I G F+L P+ S ++ + P R
Sbjct: 210 NSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDR 248
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL+ + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLARVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 65/269 (24%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
+L + LG G FG+V A + AVK ++ + + E +K L+H +
Sbjct: 191 KLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKL 245
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK--------LFQQLIDGVS 128
V+LH V+ +K IY++ E++ G L D + S EG K Q+ +G++
Sbjct: 246 VKLHAVV-TKEPIYIITEFMAKGSLLDFLKSD------EGSKQPLPKLIDFSAQIAEGMA 298
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ + HRDL+ NIL+ +
Sbjct: 299 FIEQRNYIHRDLRAA-----------------------------------NILVSASLVC 323
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVI 245
KI+DFGL+ + + D G+ + APE + N G SD+WS G++L I
Sbjct: 324 KIADFGLARVIE----DNEYTAREGAKFPIKWTAPEAI-NFGSFTIKSDVWSFGILLMEI 378
Query: 246 LT-GYLPFDDRNLAVLYQKIFRGDFKLPK 273
+T G +P+ + + + + RG +++P+
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERG-YRMPR 406
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 53/263 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKHPN 75
+ +G G FG+V + +P +I + + TD+ +R E + + HPN
Sbjct: 20 KVIGVGEFGEVCSGR---LKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNK 133
++ L V+ + ++ EY+ G L D K GR + + + + G+ Y +
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL NIL++S K+SDF
Sbjct: 136 SYVHRDLAA-----------------------------------RNILVNSNLVCKVSDF 160
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
G+S + + D +TT G + APE +A R + A SD+WS G++++ +++ G
Sbjct: 161 GMSRVLED--DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGE 217
Query: 250 LPFDDRNLAVLYQKIFRGDFKLP 272
P+ D + + + I G ++LP
Sbjct: 218 RPYWDMSNQDVIKAIEEG-YRLP 239
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 52/252 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 16 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 70
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 71 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 130 LRA-----------------------------------ANILVSDTLSCKIADFGLARLI 154
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+ D G+ + APE + N G SD+WS G++L I+T G +P+
Sbjct: 155 E----DNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 209
Query: 256 NLAVLYQKIFRG 267
+ Q + RG
Sbjct: 210 TNPEVIQNLERG 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 52/247 (21%)
Query: 10 GMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
+ + +L +T+G+G FG V G AVK ++ + + E + +
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMT 69
Query: 70 LLKHPNVVRLHEVLAS-KSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKLFQQLIDG 126
L+H N+V+L V+ K +Y+V EY+ G L D + S+GR L K + +
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y HRDL N+L+
Sbjct: 130 MEYLEGNNFVHRDLAA-----------------------------------RNVLVSEDN 154
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
K+SDFGL+ +D G L + APE L + + SD+WS G++L+ I
Sbjct: 155 VAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFS-TKSDVWSFGILLWEIY 208
Query: 247 T-GYLPF 252
+ G +P+
Sbjct: 209 SFGRVPY 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 53/263 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKHPN 75
+ +G G FG+V + +P +I + + TD+ +R E + + HPN
Sbjct: 14 KVIGVGEFGEVCSGR---LKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNK 133
++ L V+ + ++ EY+ G L D K GR + + + + G+ Y +
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL NIL++S K+SDF
Sbjct: 130 SYVHRDLAA-----------------------------------RNILVNSNLVCKVSDF 154
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
G+S + + D +TT G + APE +A R + A SD+WS G++++ +++ G
Sbjct: 155 GMSRVLED--DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGE 211
Query: 250 LPFDDRNLAVLYQKIFRGDFKLP 272
P+ D + + + I G ++LP
Sbjct: 212 RPYWDMSNQDVIKAIEEG-YRLP 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 85
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 131
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 132 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 184
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 185 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEI 241
Query: 246 LT 247
T
Sbjct: 242 FT 243
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 53/280 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G FG V L+ A+K + + + + E + L HP +V+L+
Sbjct: 18 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYG 72
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGR-KLFQQLIDGVSYCHNKGVFHRDL 140
V ++ I +V E++ G L D + ++ L AE + + +G++Y V HRDL
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
N L+ IK+SDFG++
Sbjct: 133 AA-----------------------------------RNCLVGENQVIKVSDFGMT---- 153
Query: 201 HFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRN 256
F D ++ G+ + +PEV + Y + SD+WS GV+++ + + G +P+++R+
Sbjct: 154 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRS 212
Query: 257 LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
+ + + I G F+L P+ S ++ P R
Sbjct: 213 NSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWRERPEDR 251
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 88
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 134
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 135 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 187
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 188 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEI 244
Query: 246 LT 247
T
Sbjct: 245 FT 246
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 66/256 (25%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK-----------GRLQEAEGR- 117
+ KH N++ L +Y+++EY + G L + + ++ R+ E +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 118 ----KLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFN 173
QL G+ Y ++ HRDL
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAA------------------------------- 185
Query: 174 VLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGA 231
N+L+ +KI+DFGL+ + D TT G ++APE L +R Y
Sbjct: 186 ----RNVLVTENNVMKIADFGLARDINNI--DXXKKTTNGRLPVKWMAPEALFDRVY-TH 238
Query: 232 TSDIWSCGVILYVILT 247
SD+WS GV+++ I T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 142
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 188
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 241
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 242 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEI 298
Query: 246 LT 247
T
Sbjct: 299 FT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 83
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 129
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 130 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLTARNVLVTENNV 182
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 183 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEI 239
Query: 246 LT 247
T
Sbjct: 240 FT 241
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 132/354 (37%), Gaps = 95/354 (26%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLKH 73
++L LGEG +G V A +G A+K +E + L+ REI LK KH
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 74 PNVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
N++ + + S ++Y++ E + ++ S L + + Q + V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
H V HRDLK N+L++S ++
Sbjct: 127 VLHGSNVIHRDLKP-----------------------------------SNLLINSNCDL 151
Query: 189 KISDFGLSALPQHFRDDGLLHT--------TCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
K+ DFGL+ + D T + Y APEV+ D+WSCG
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 241 IL------------------YVILTGYL--PFDDRNLAVLYQKIFRGDFK-LPKW----- 274
IL +++ G + P D +L + R K LP +
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 275 ------LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY--TPANPDDDEE 320
++P +LL+++L +P KRIT A E E Y T +P+D+ E
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRIT-----AKEALEHPYLQTYHDPNDEPE 320
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 59/246 (23%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
E+ +G G FG V A+ + A+K +E I E+ L + HPN+
Sbjct: 12 EVEEVVGRGAFGVVCKAKWRAKDV--AIKQIESESERKAFIV-----ELRQLSRVNHPNI 64
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRL---QEAEGRKLFQQLIDGVSYCHN- 132
V+L+ A + + +V+EY GG L++ + L A Q GV+Y H+
Sbjct: 65 VKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 133 --KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI-K 189
K + HRDLK N+LL + G + K
Sbjct: 123 QPKALIHRDLKP-----------------------------------PNLLLVAGGTVLK 147
Query: 190 ISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
I DFG + + H ++ GS ++APEV Y D++S G+IL+ ++T
Sbjct: 148 ICDFGTACDIQTHMTNNK------GSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITR 200
Query: 249 YLPFDD 254
PFD+
Sbjct: 201 RKPFDE 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V EY+ G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLGRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++EY ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
++I+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MRIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 52/247 (21%)
Query: 10 GMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
+ + +L +T+G+G FG V G AVK ++ + + E + +
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMT 60
Query: 70 LLKHPNVVRLHEVLAS-KSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKLFQQLIDG 126
L+H N+V+L V+ K +Y+V EY+ G L D + S+GR L K + +
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ Y HRDL N+L+
Sbjct: 121 MEYLEGNNFVHRDLAA-----------------------------------RNVLVSEDN 145
Query: 187 NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
K+SDFGL+ +D G L + APE L + SD+WS G++L+ I
Sbjct: 146 VAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREAAFS-TKSDVWSFGILLWEIY 199
Query: 247 T-GYLPF 252
+ G +P+
Sbjct: 200 SFGRVPY 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 59/246 (23%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
E+ +G G FG V A+ + A+K +E I E+ L + HPN+
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAKDV--AIKQIESESERKAFIV-----ELRQLSRVNHPNI 63
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRL---QEAEGRKLFQQLIDGVSYCHN- 132
V+L+ A + + +V+EY GG L++ + L A Q GV+Y H+
Sbjct: 64 VKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 133 --KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI-K 189
K + HRDLK N+LL + G + K
Sbjct: 122 QPKALIHRDLKP-----------------------------------PNLLLVAGGTVLK 146
Query: 190 ISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
I DFG + + H ++ GS ++APEV Y D++S G+IL+ ++T
Sbjct: 147 ICDFGTACDIQTHMTNNK------GSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITR 199
Query: 249 YLPFDD 254
PFD+
Sbjct: 200 RKPFDE 205
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 120/315 (38%), Gaps = 57/315 (18%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D G+ AVK L + H K + RE+ LK
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK---RAYRELVLLKC 77
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHME--LDHERMSYLLYQML 134
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 135 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 159
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ + + ++ + Y APEV+ GY DIWS G I+
Sbjct: 160 DCTLKILDFGLA---RTASTNFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 215
Query: 245 ILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADE 304
++ G + F + + K+ Q +R +E P GI +E
Sbjct: 216 LVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRP----AYPGIAFEE 271
Query: 305 WFEQDYTPANPDDDE 319
F P+ + D+
Sbjct: 272 LFPDWIFPSESERDK 286
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 53/280 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G FG V L+ A+K + + + + E + L HP +V+L+
Sbjct: 16 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYG 70
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGR-KLFQQLIDGVSYCHNKGVFHRDL 140
V ++ I +V E++ G L D + ++ L AE + + +G++Y V HRDL
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130
Query: 141 KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQ 200
N L+ IK+SDFG++
Sbjct: 131 AA-----------------------------------RNCLVGENQVIKVSDFGMT---- 151
Query: 201 HFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRN 256
F D ++ G+ + +PEV + Y + SD+WS GV+++ + + G +P+++R+
Sbjct: 152 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRS 210
Query: 257 LAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
+ + + I G F+L P+ S ++ P R
Sbjct: 211 NSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWRERPEDR 249
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FGKV + L G AVK L++ R ++ Q + E+ + + H N++RL
Sbjct: 46 LGRGGFGKV-YKGRLADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNLLRLRG 102
Query: 82 VLASKSKIYMVLEYVTGGE----LFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK---G 134
+ ++ +V Y+ G L ++ S+ L + +++ G++Y H+
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRD+K NILLD + + DFG
Sbjct: 163 IIHRDVKAA-----------------------------------NILLDEEFEAVVGDFG 187
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+ L ++D + G+ ++APE L+ G +D++ GV+L ++TG FD
Sbjct: 188 LAKL-MDYKDXHVXXAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 255 RNLA 258
LA
Sbjct: 246 ARLA 249
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 101/256 (39%), Gaps = 55/256 (21%)
Query: 9 EGMRLG-RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIAT 67
G LG RY + LG G G V A D D A+K K + + REI
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKI 61
Query: 68 LKLLKHPNVVRLHEVLASK--------------SKIYMVLEYVTGGELFDKIASKGRLQE 113
++ L H N+V++ E+L + +Y+V EY+ + +G L E
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLE 119
Query: 114 AEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFN 173
R QL+ G+ Y H+ V HRDLK +F+ T
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLK-----------PANLFINT------------- 155
Query: 174 VLQLENILLDSKGNIKISDFGLS-ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAT 232
E+++L KI DFGL+ + H+ G L + Y +P +L +
Sbjct: 156 ----EDLVL------KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKA 205
Query: 233 SDIWSCGVILYVILTG 248
D+W+ G I +LTG
Sbjct: 206 IDMWAAGCIFAEMLTG 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 132/354 (37%), Gaps = 95/354 (26%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKLLKH 73
++L LGEG +G V A +G A+K +E + L+ REI LK KH
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 74 PNVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVS 128
N++ + + S ++Y++ E + ++ S L + + Q + V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
H V HRDLK N+L++S ++
Sbjct: 127 VLHGSNVIHRDLKP-----------------------------------SNLLINSNCDL 151
Query: 189 KISDFGLSALPQHFRDDGLLHTT--------CGSPNYVAPEVLANRGYDGATSDIWSCGV 240
K+ DFGL+ + D T + Y APEV+ D+WSCG
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 241 IL------------------YVILTGYL--PFDDRNLAVLYQKIFRGDFK-LPKW----- 274
IL +++ G + P D +L + R K LP +
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 275 ------LSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY--TPANPDDDEE 320
++P +LL+++L +P KRIT A E E Y T +P+D+ E
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRIT-----AKEALEHPYLQTYHDPNDEPE 320
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK--ITDQIKREIATLKL 70
+ RY LGEG +G+V A D + A+K + R+ H + + RE++ LK
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIK---RIRLEHEEEGVPGTAIREVSLLKE 89
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYC 130
L+H N++ L V+ +++++ EY +L + + + QLI+GV++C
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 131 HNKGVFHRDLK 141
H++ HRDLK
Sbjct: 149 HSRRCLHRDLK 159
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 61/266 (22%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
+L + LG G FG+V + + A+K L+ + + E +K LKH +
Sbjct: 12 QLIKRLGNGQFGEV-WMGTWNGNTKVAIKTLKPGTMS----PESFLEEAQIMKKLKHDKL 66
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKL--------FQQLIDGVS 128
V+L+ V+ S+ IY+V EY+ G L D L++ EGR L Q+ G++
Sbjct: 67 VQLYAVV-SEEPIYIVTEYMNKGSLLD------FLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 129 YCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
Y HRDL+ NIL+ +
Sbjct: 120 YIERMNYIHRDLRSA-----------------------------------NILVGNGLIC 144
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
KI+DFGL+ L + ++ P + APE A G SD+WS G++L ++T
Sbjct: 145 KIADFGLARLIED--NEXTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELVT 201
Query: 248 -GYLPFDDRNLAVLYQKIFRGDFKLP 272
G +P+ N + +++ RG +++P
Sbjct: 202 KGRVPYPGMNNREVLEQVERG-YRMP 226
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V E + G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGAVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FG+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 17 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 71
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HR+
Sbjct: 72 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 131 LRA-----------------------------------ANILVSDTLSCKIADFGLARLI 155
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE + N G SD+WS G++L I+T G +P+
Sbjct: 156 ED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 212
Query: 258 AVLYQKIFRG 267
+ Q + RG
Sbjct: 213 PEVIQNLERG 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 20 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V E + G L D K + + + + + G+ Y
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 136 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 160
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 161 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 217
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 218 GERPYWEMSNQDVIKAVDEG-YRLP 241
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 67/258 (25%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ GM EL +G G FG+V A+ G + +K ++ N ++ +RE+
Sbjct: 7 KRFGMDFKEIEL---IGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVK 56
Query: 67 TLKLLKHPNVVRLHEVL-------------ASKSK---IYMVLEYVTGGELFDKIASK-- 108
L L H N+V + +S+SK +++ +E+ G L I +
Sbjct: 57 ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116
Query: 109 GRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIR 168
+L + +LF+Q+ GV Y H+K + +RDLK
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKP-------------------------- 150
Query: 169 PWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGY 228
NI L +KI DFGL ++DG + G+ Y++PE ++++ Y
Sbjct: 151 ---------SNIFLVDTKQVKIGDFGLVT---SLKNDGKRXRSKGTLRYMSPEQISSQDY 198
Query: 229 DGATSDIWSCGVILYVIL 246
G D+++ G+IL +L
Sbjct: 199 -GKEVDLYALGLILAELL 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 47/244 (19%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G FGKV + L G AVK L++ R ++ Q + E+ + + H N++RL
Sbjct: 38 LGRGGFGKV-YKGRLADGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNLLRLRG 94
Query: 82 VLASKSKIYMVLEYVTGGE----LFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNK---G 134
+ ++ +V Y+ G L ++ S+ L + +++ G++Y H+
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRD+K NILLD + + DFG
Sbjct: 155 IIHRDVKAA-----------------------------------NILLDEEFEAVVGDFG 179
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+ L ++D + G ++APE L+ G +D++ GV+L ++TG FD
Sbjct: 180 LAKL-MDYKDXHVXXAVRGXIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDL 237
Query: 255 RNLA 258
LA
Sbjct: 238 ARLA 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 118/303 (38%), Gaps = 66/303 (21%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHPNVVRL 79
+GEGNFG+V A+ GL I E+ L KL HPN++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAE--------------GRKLFQQLID 125
+ +Y+ +EY G L D + K R+ E + ++L D
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 126 ---GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
G+ Y K HRDL NIL+
Sbjct: 141 VARGMDYLSQKQFIHRDLAA-----------------------------------RNILV 165
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGV 240
KI+DFGLS + + + T G ++A E L N SD+WS GV
Sbjct: 166 GENYVAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGV 219
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQ--NLLRKILEPNPVKRITI 297
+L+ I++ G P+ A LY+K+ +G ++L K L+ + +L+R+ P +R +
Sbjct: 220 LLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 278
Query: 298 AGI 300
A I
Sbjct: 279 AQI 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 18 LGRTLGEGNFGKVKFAQDLD-----SGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
LG+TLGEG FGKV A AVK+L++N ++ D + E LK +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS-ELRDLLS-EFNVLKQVN 84
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP+V++L+ + + +++EY G L +G L+E+ RK+ + ++
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRES--RKVGPGYLGSGGSRNS 136
Query: 133 KGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ H D + + L S +I+ +L L+ L NIL+ +
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLV-------HRDLAARNILVAEGRKM 189
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
KISDFGLS + +D + + G ++A E L + Y SD+WS GV+L+ I+
Sbjct: 190 KISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIV 246
Query: 247 T-GYLPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
T G P+ L+ + G + P S L+ + + P KR A I D
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 18 LGRTLGEGNFGKVKFAQDLD-----SGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
LG+TLGEG FGKV A AVK+L++N ++ D + E LK +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS-ELRDLLS-EFNVLKQVN 84
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP+V++L+ + + +++EY G L +G L+E+ RK+ + ++
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRES--RKVGPGYLGSGGSRNS 136
Query: 133 KGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ H D + + L S +I+ +L L+ L NIL+ +
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV-------HRDLAARNILVAEGRKM 189
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
KISDFGLS + +D + + G ++A E L + Y SD+WS GV+L+ I+
Sbjct: 190 KISDFGLSR--DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIV 246
Query: 247 T-GYLPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
T G P+ L+ + G + P S L+ + + P KR A I D
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 118/303 (38%), Gaps = 66/303 (21%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHPNVVRL 79
+GEGNFG+V A+ GL I E+ L KL HPN++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAE--------------GRKLFQQLID 125
+ +Y+ +EY G L D + K R+ E + ++L D
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 126 ---GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
G+ Y K HRDL NIL+
Sbjct: 151 VARGMDYLSQKQFIHRDLAA-----------------------------------RNILV 175
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGV 240
KI+DFGLS + + + T G ++A E L Y SD+WS GV
Sbjct: 176 GENYVAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGV 229
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQ--NLLRKILEPNPVKRITI 297
+L+ I++ G P+ A LY+K+ +G ++L K L+ + +L+R+ P +R +
Sbjct: 230 LLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 288
Query: 298 AGI 300
A I
Sbjct: 289 AQI 291
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 128/310 (41%), Gaps = 62/310 (20%)
Query: 15 RYELGRTLGEGNFGKVKFA---QDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
++ LGR LG+G FG V+ A Q+ S + AVK+L K II ++ RE A +K
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEF 82
Query: 72 KHPNVVRLHEV-LASKSK----IYMV-LEYVTGGELFDKIASKGRLQEAEGRKLFQQLID 125
HP+V +L V L S++K I MV L ++ G+L + + R+ E Q L+
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA-SRIGENPFNLPLQTLVR 141
Query: 126 -------GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLE 178
G+ Y ++ HRDL
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAA-----------------------------------R 166
Query: 179 NILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDI 235
N +L + ++DFGLS + C S ++A E LA+ Y SD+
Sbjct: 167 NCMLAEDMTVCVADFGLS---RKIYSGDYYRQGCASKLPVKWLALESLADNLYT-VHSDV 222
Query: 236 WSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVK 293
W+ GV ++ I+T G P+ A +Y + G+ K P +L+ + +P +
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQ 282
Query: 294 RITIAGIKAD 303
R + ++ +
Sbjct: 283 RPSFTCLRME 292
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 104/252 (41%), Gaps = 58/252 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYE+ + +G+G+FG+V A D A+K++ + H Q EI L+ L+
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 75 ------NVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDG 126
NV+ + E ++ I M E ++ EL K +G RK ++
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQC 212
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H + H DLK ENILL +G
Sbjct: 213 LDALHKNRIIHCDLKP-----------------------------------ENILLKQQG 237
Query: 187 --NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
IK+ DFG S+ +H R ++T S Y APEV+ Y G D+WS G IL
Sbjct: 238 RSGIKVIDFG-SSCYEHQR----VYTXIQSRFYRAPEVILGARY-GMPIDMWSLGCILAE 291
Query: 245 ILTGY--LPFDD 254
+LTGY LP +D
Sbjct: 292 LLTGYPLLPGED 303
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 18 LGRTLGEGNFGKVKFAQDLD-----SGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
LG+TLGEG FGKV A AVK+L++N ++ D + E LK +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS-ELRDLLS-EFNVLKQVN 84
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHN 132
HP+V++L+ + + +++EY G L +G L+E+ RK+ + ++
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRES--RKVGPGYLGSGGSRNS 136
Query: 133 KGVFHRDLKVI----LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNI 188
+ H D + + L S +I+ +L L+ L NIL+ +
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV-------HRDLAARNILVAEGRKM 189
Query: 189 KISDFGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
KISDFGLS + +D + + G ++A E L + Y SD+WS GV+L+ I+
Sbjct: 190 KISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIV 246
Query: 247 T-GYLPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKAD 303
T G P+ L+ + G + P S L+ + + P KR A I D
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 104/252 (41%), Gaps = 58/252 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYE+ + +G+G+FG+V A D A+K++ + H Q EI L+ L+
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 75 ------NVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDG 126
NV+ + E ++ I M E ++ EL K +G RK ++
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQC 212
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H + H DLK ENILL +G
Sbjct: 213 LDALHKNRIIHCDLKP-----------------------------------ENILLKQQG 237
Query: 187 --NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
IK+ DFG S+ +H R ++T S Y APEV+ Y G D+WS G IL
Sbjct: 238 RSGIKVIDFG-SSCYEHQR----VYTXIQSRFYRAPEVILGARY-GMPIDMWSLGCILAE 291
Query: 245 ILTGY--LPFDD 254
+LTGY LP +D
Sbjct: 292 LLTGYPLLPGED 303
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 63/257 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G+FG+V +D +G AVK K R+ ++ E+ L P +V L+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----EELVACAGLSSPRIVPLYG 131
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+ + + +E + GG L I G L E Q ++G+ Y H + + H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-IKISDFGLSALPQ 200
+N+LL S G+ + DFG +
Sbjct: 192 A-----------------------------------DNVLLSSDGSRAALCDFGHALC-- 214
Query: 201 HFRDDGLLHTTC------GSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
+ DGL + G+ ++APEV+ + D A DIWS ++ +L G P
Sbjct: 215 -LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD-AKVDIWSSCCMMLHMLNGCHP--- 269
Query: 255 RNLAVLYQKIFRGDFKL 271
+ + FRG L
Sbjct: 270 ------WTQYFRGPLCL 280
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++ Y ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVAY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 53/265 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLKH 73
+ + +G G FG+V + LP +I + + + T++ +R E + + H
Sbjct: 49 IDKVVGAGEFGEVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCH 131
PN++RL V+ + +V E + G L D K + + + + + G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ G HRDL NIL++S K+S
Sbjct: 165 DMGYVHRDLAA-----------------------------------RNILINSNLVCKVS 189
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + + D +TT G + +PE +A R + A SD+WS G++L+ +++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMSY 246
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ + + + + + G ++LP
Sbjct: 247 GERPYWEMSNQDVIKAVDEG-YRLP 270
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 52/252 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG G G+V + AVK L++ + D E +K L+H +VRL+
Sbjct: 21 LGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ ++ IY++ EY+ G L D K S +L + + Q+ +G+++ + HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ NIL+ + KI+DFGL+ L
Sbjct: 135 LRAA-----------------------------------NILVSDTLSCKIADFGLARL- 158
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE + N G SD+WS G++L I+T G +P+
Sbjct: 159 ---IEDAEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 256 NLAVLYQKIFRG 267
+ Q + RG
Sbjct: 215 TNPEVIQNLERG 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 38/242 (15%)
Query: 18 LGRTLGEGNFGKVKFAQ--DLDSGLP-----FAVKILEKNRIIHLKITDQIKREIATLKL 70
LG+ LGEG FG+V A+ +D P AVK+L K+ ++D + E+ +K+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 71 L-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
+ KH N++ L +Y+++ Y ASKG L+E L + G+ Y
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVGY----------ASKGNLREY----LRARRPPGMEY 142
Query: 130 CHNKGVFHRDLKVI--LKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
++ + L SC ++A +L + + L N+L+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-------HRDLAARNVLVTENNV 195
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVI 245
+KI+DFGL+ + D TT G ++APE L +R Y SD+WS GV+++ I
Sbjct: 196 MKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEI 252
Query: 246 LT 247
T
Sbjct: 253 FT 254
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 186
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 187 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 52 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 110
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 139
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 140 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 194
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 254
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 255 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 71 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 158
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 159 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 273
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 55 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 113
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 142
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 143 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 197
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 198 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 257
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 258 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 288
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 51 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 109
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 138
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 139 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 193
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 194 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 253
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 254 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 284
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 71 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 158
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 159 ---LIVD--GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 273
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 74
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 133 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 157
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 158 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 214
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 215 AELLLG-------------QPIFPGD 227
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 132 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 156
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 157 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 214 AELLLG-------------QPIFPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 92
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 151 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 175
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 176 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 232
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 233 AELLLG-------------QPIFPGD 245
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 186
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 187 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 126/304 (41%), Gaps = 66/304 (21%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK----HPN 75
+ LG G+ G V F G P AVK + + D + +KLL HPN
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRM---------LIDFCDIALMEIKLLTESDDHPN 88
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG------RLQ-EAEGRKLFQQLIDGVS 128
V+R + + +Y+ LE + L D + SK +LQ E L +Q+ GV+
Sbjct: 89 VIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 129 YCHNKGVFHRDLKV--ILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H+ + HRDLK IL S R Q EN+
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQ------------------QTGAENL------ 183
Query: 187 NIKISDFG----LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGV 240
I ISDFG L + FR + L+ G+ + APE+L T DI+S G
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXN--LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGC 241
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL-------PKWLSPGAQNLLRKILEPNPV 292
+ Y IL+ G PF D+ I RG F L + L A +L+ ++++ +P+
Sbjct: 242 VFYYILSKGKHPFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPL 299
Query: 293 KRIT 296
KR T
Sbjct: 300 KRPT 303
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 100/257 (38%), Gaps = 63/257 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G+FG+V +D +G AVK K R+ ++ E+ L P +V L+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----EELVACAGLSSPRIVPLYG 133
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+ + + +E + GG L I G L E Q ++G+ Y H + + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-IKISDFGLSALPQ 200
+N+LL S G+ + DFG +
Sbjct: 194 A-----------------------------------DNVLLSSDGSRAALCDFGHALC-- 216
Query: 201 HFRDDGLLHTTC------GSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
+ DGL + G+ ++APEV+ + D A DIWS ++ +L G P
Sbjct: 217 -LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD-AKVDIWSSCCMMLHMLNGCHP--- 271
Query: 255 RNLAVLYQKIFRGDFKL 271
+ + FRG L
Sbjct: 272 ------WTQYFRGPLCL 282
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 81
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 140 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 164
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 165 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 221
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 222 AELLLG-------------QPIFPGD 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 85
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 144 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 168
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 169 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 225
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 226 AELLLG-------------QPIFPGD 238
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 132 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 156
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 157 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 214 AELLLG-------------QPIFPGD 226
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 149
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 150 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 174
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 175 DFGL-ARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 232
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 233 GAPPYPDVN 241
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 59 DQIKREIATL-KLLKHPN-VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEG 116
D + EIA L KL +H + ++RL++ + IYMV+E +L + K + E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ ++ +++ V H G+ H DLK P F
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLK---------------------------PANF---- 186
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD------- 229
+++D G +K+ DFG++ Q + + G+ NY+ PE + +
Sbjct: 187 ---LIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSK 241
Query: 230 ---GATSDIWSCGVILYVILTGYLPFDD--RNLAVLYQKIF-RGDFKLPKWLSPGAQNLL 283
SD+WS G ILY + G PF ++ L+ I + + P Q++L
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301
Query: 284 RKILEPNPVKRITIAGIKADEWFEQDYTPAN 314
+ L+ +P +RI+I + A + + P N
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 100/257 (38%), Gaps = 63/257 (24%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G+FG+V +D +G AVK K R+ ++ E+ L P +V L+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----EELVACAGLSSPRIVPLYG 117
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLK 141
+ + + +E + GG L I G L E Q ++G+ Y H + + H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 142 VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-IKISDFGLSALPQ 200
+N+LL S G+ + DFG +
Sbjct: 178 A-----------------------------------DNVLLSSDGSRAALCDFGHALC-- 200
Query: 201 HFRDDGLLHTTC------GSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
+ DGL + G+ ++APEV+ + D A DIWS ++ +L G P
Sbjct: 201 -LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD-AKVDIWSSCCMMLHMLNGCHP--- 255
Query: 255 RNLAVLYQKIFRGDFKL 271
+ + FRG L
Sbjct: 256 ------WTQYFRGPLCL 266
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 126/304 (41%), Gaps = 66/304 (21%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK----HPN 75
+ LG G+ G V F G P AVK + + D + +KLL HPN
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRM---------LIDFCDIALMEIKLLTESDDHPN 88
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG------RLQ-EAEGRKLFQQLIDGVS 128
V+R + + +Y+ LE + L D + SK +LQ E L +Q+ GV+
Sbjct: 89 VIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 129 YCHNKGVFHRDLKV--ILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H+ + HRDLK IL S R Q EN+
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQ------------------QTGAENL------ 183
Query: 187 NIKISDFG----LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS--DIWSCGV 240
I ISDFG L + FR + L+ G+ + APE+L T DI+S G
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXN--LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGC 241
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL-------PKWLSPGAQNLLRKILEPNPV 292
+ Y IL+ G PF D+ I RG F L + L A +L+ ++++ +P+
Sbjct: 242 VFYYILSKGKHPFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPL 299
Query: 293 KRIT 296
KR T
Sbjct: 300 KRPT 303
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 49/265 (18%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLK 72
++ + +G G FG+V LP +I + + T++ +R E + +
Sbjct: 36 KIEQVIGAGEFGEVCSGH---LKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 92
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCH 131
HPNV+ L V+ + + ++ E++ G L + + G+ + + + + G+ Y
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ HRDL NIL++S K+S
Sbjct: 153 DMNYVHRDLAA-----------------------------------RNILVNSNLVCKVS 177
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + D + G + APE + R + A SD+WS G++++ +++
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA-SDVWSYGIVMWEVMSY 236
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ D + I D++LP
Sbjct: 237 GERPYWDMTNQDVINAI-EQDYRLP 260
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 85
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 144 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 168
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 169 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 225
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 226 AELLLG-------------QPIFPGD 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 77
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 136 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 160
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 161 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 217
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 218 AELLLG-------------QPIFPGD 230
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K+
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKV 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D S+ E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDAT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS GVI+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 60/254 (23%)
Query: 13 LGRYELGRTLGEGNFGKV--KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKL 70
L YE G +G G +G V +D +A+K +E I+ REIA L+
Sbjct: 21 LFEYE-GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-----GISMSACREIALLRE 74
Query: 71 LKHPNVVRLHEVLASKS--KIYMVLEYVTGGELFDKI-------ASKGRLQEAEG--RKL 119
LKHPNV+ L +V S + K++++ +Y +L+ I A+K +Q G + L
Sbjct: 75 LKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 120 FQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLEN 179
Q++DG+ Y H V HRDLK N
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPA-----------------------------------N 158
Query: 180 ILL----DSKGNIKISDFGLSAL-PQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSD 234
IL+ +G +KI+D G + L + L + Y APE+L + D
Sbjct: 159 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 218
Query: 235 IWSCGVILYVILTG 248
IW+ G I +LT
Sbjct: 219 IWAIGCIFAELLTS 232
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 53/259 (20%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
E+G +G+G FG+V + + + +E++ LK KRE+ + +H NV
Sbjct: 36 EIGELIGKGRFGQV-YHGRWHGEVAIRLIDIERDNEDQLK---AFKREVMAYRQTRHENV 91
Query: 77 VRLHEVLASKSKIYMVLEYVTGGELFDKIA-SKGRLQEAEGRKLFQQLIDGVSYCHNKGV 135
V S + ++ G L+ + +K L + R++ Q+++ G+ Y H KG+
Sbjct: 92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI 151
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGL 195
H+DLK +N+ D+ G + I+DFGL
Sbjct: 152 LHKDLKS-----------------------------------KNVFYDN-GKVVITDFGL 175
Query: 196 ---SALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYD--------GATSDIWSCGVILYV 244
S + Q R + L G ++APE++ D SD+++ G I Y
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235
Query: 245 ILTGYLPFDDRNL-AVLYQ 262
+ PF + A+++Q
Sbjct: 236 LHAREWPFKTQPAEAIIWQ 254
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 44/215 (20%)
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGEL--FDKIASKGRLQEAEGRKLFQ 121
E + + +HPN++RL V+ + + ++ E++ G L F ++ + G+ + + +
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLR 123
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
+ G+ Y HRDL NIL
Sbjct: 124 GIASGMRYLAEMSYVHRDLAA-----------------------------------RNIL 148
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSC 238
++S K+SDFGLS + D ++ G + APE +A R + A SD WS
Sbjct: 149 VNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSA-SDAWSY 207
Query: 239 GVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKLP 272
G++++ +++ G P+ D + + I D++LP
Sbjct: 208 GIVMWEVMSFGERPYWDMSNQDVINAI-EQDYRLP 241
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 107
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 166 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 190
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 191 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 247
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 248 AELLLG-------------QPIFPGD 260
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 132 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 156
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 157 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 214 AELLLG-------------QPIFPGD 226
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 53/287 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL----KLLKHPNVV 77
LG G++G+V + + G +AVK + + R++A + K+ +HP V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVK----RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV 120
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKG-RLQEAEGRKLFQQLIDGVSYCHNKGVF 136
RL + +Y+ E + G L + G L EA+ + + +++ H++G+
Sbjct: 121 RLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
H D+K NI L +G K+ DFGL
Sbjct: 180 HLDVKPA-----------------------------------NIFLGPRGRCKLGDFGLL 204
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV-ILYVILTGYLPFDDR 255
G G P Y+APE+L +G G +D++S G+ IL V LP
Sbjct: 205 V---ELGTAGAGEVQEGDPRYMAPELL--QGSYGTAADVFSLGLTILEVACNMELPHGGE 259
Query: 256 NLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKA 302
L Q +F LS +++L +LEP+P R T + A
Sbjct: 260 GWQQLRQGYLPPEFT--AGLSSELRSVLVMMLEPDPKLRATAEALLA 304
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 86
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 145 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 169
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 170 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 226
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 227 AELLLG-------------QPIFPGD 239
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K+
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKV 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D S+ E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDAT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS GVI+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 119/298 (39%), Gaps = 52/298 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
+G G+F V D ++ + A L+ ++ + + K E LK L+HPN+VR ++
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-RQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 82 VLASKSK----IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKG--V 135
S K I +V E T G L + + R +Q++ G+ + H + +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 136 FHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS-KGNIKISDFG 194
HRDLK +NI + G++KI D G
Sbjct: 153 IHRDLKC-----------------------------------DNIFITGPTGSVKIGDLG 177
Query: 195 LSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDD 254
L+ L + G+P + APE + YD + D+++ G T P+ +
Sbjct: 178 LATLKRA----SFAKAVIGTPEFXAPEXYEEK-YDESV-DVYAFGXCXLEXATSEYPYSE 231
Query: 255 -RNLAVLYQKIFRG--DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQD 309
+N A +Y+++ G K P + ++ + N +R +I + +F+++
Sbjct: 232 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 71/316 (22%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
R G+TLG G FGKV A D+ + AVK+L+ + HL + + E+ L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLS 104
Query: 70 LL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK------------------GR 110
L H N+V L ++ EY G+L + + K
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 111 LQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPW 170
L + Q+ G+++ +K HRDL
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA---------------------------- 196
Query: 171 KFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRG 227
NILL KI DFGL+ +H ++D ++ P ++APE + N
Sbjct: 197 -------RNILLTHGRITKICDFGLA---RHIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 228 YDGATSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLR 284
Y SD+WS G+ L+ + + G P+ + + K+ + F++ P+ ++++
Sbjct: 247 YT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 305
Query: 285 KILEPNPVKRITIAGI 300
+ +P+KR T I
Sbjct: 306 TCWDADPLKRPTFKQI 321
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 78
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 137 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 161
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 162 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 218
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 219 AELLLG-------------QPIFPGD 231
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 66/303 (21%)
Query: 21 TLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL-KLLKHPNVVRL 79
+GEGNFG+V A+ GL I E+ L KL HPN++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAE--------------GRKLFQQLID 125
+ +Y+ +EY G L D + K R+ E + ++L D
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 126 ---GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
G+ Y K HR+L NIL+
Sbjct: 148 VARGMDYLSQKQFIHRNLAA-----------------------------------RNILV 172
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGS--PNYVAPEVLANRGYDGATSDIWSCGV 240
KI+DFGLS + + + T G ++A E L N SD+WS GV
Sbjct: 173 GENYVAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGV 226
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQ--NLLRKILEPNPVKRITI 297
+L+ I++ G P+ A LY+K+ +G ++L K L+ + +L+R+ P +R +
Sbjct: 227 LLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 285
Query: 298 AGI 300
A I
Sbjct: 286 AQI 288
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 101
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 160 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 184
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 185 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 241
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 242 AELLLG-------------QPIFPGD 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 107
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 166 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 190
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 191 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 247
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 248 AELLLG-------------QPIFPGD 260
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 55/254 (21%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
YE+ T+G G +G V A+ +G A+K + N + + RE+ LK KH N
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 76 VVRLHEVLASK------SKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
++ + ++L +Y+VL+ + +L I S L R QL+ G+ Y
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRDLK N+L++ +K
Sbjct: 174 MHSAQVIHRDLKP-----------------------------------SNLLVNENCELK 198
Query: 190 ISDFGLS-------ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
I DFG++ A Q+F + + Y APE++ + D+WS G I
Sbjct: 199 IGDFGMARGLCTSPAEHQYF-----MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 253
Query: 243 YVILTGYLPFDDRN 256
+L F +N
Sbjct: 254 GEMLARRQLFPGKN 267
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 55/254 (21%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
YE+ T+G G +G V A+ +G A+K + N + + RE+ LK KH N
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 76 VVRLHEVLASK------SKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
++ + ++L +Y+VL+ + +L I S L R QL+ G+ Y
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ V HRDLK N+L++ +K
Sbjct: 175 MHSAQVIHRDLKP-----------------------------------SNLLVNENCELK 199
Query: 190 ISDFGLS-------ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
I DFG++ A Q+F + + Y APE++ + D+WS G I
Sbjct: 200 IGDFGMARGLCTSPAEHQYF-----MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 254
Query: 243 YVILTGYLPFDDRN 256
+L F +N
Sbjct: 255 GEMLARRQLFPGKN 268
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 109
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 168 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 192
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 193 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 249
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 250 AELLLG-------------QPIFPGD 262
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 108/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 73
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K +Y+ VL+YV E ++A +K L + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 132 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 156
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 157 PDTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 214 AELLLG-------------QPIFPGD 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 111
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 170 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 194
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 195 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 251
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 252 AELLLG-------------QPIFPGD 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 74/266 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK-ILEKNRIIHLKITDQIKREIATLKLLKHP 74
Y + +G G+FG V A+ DSG A+K +L+ R + RE+ ++ L H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHC 152
Query: 75 NVVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQL 123
N+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
++Y H+ G+ HRD+K +N+LLD
Sbjct: 211 FRSLAYIHSFGICHRDIKP-----------------------------------QNLLLD 235
Query: 184 SKGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVIL 242
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 236 PDTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVL 292
Query: 243 YVILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 293 AELLLG-------------QPIFPGD 305
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y + +G G+FG V A+ DSG A+K + + + RE+ ++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 76 VVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQLI 124
+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
++Y H+ G+ HRD+K +N+LLD
Sbjct: 133 RSLAYIHSFGICHRDIKP-----------------------------------QNLLLDP 157
Query: 185 KGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 158 DTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGD------FKLPKWLSPGAQNLLRKILEPNPVKRITI 297
+L G Q IF GD ++ K L + +R+ + PN
Sbjct: 215 ELLLG-------------QPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPN-YTEFAF 259
Query: 298 AGIKADEWFEQDYTPANPDD 317
IKA W + + P P +
Sbjct: 260 PQIKAHPW-TKVFRPRTPPE 278
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 118/304 (38%), Gaps = 61/304 (20%)
Query: 18 LGRTLGEGNFGKV---KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
LG+ LGEG FG V Q+ + L AVK ++ + +I ++ E A +K HP
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREI-EEFLSEAACMKDFSHP 96
Query: 75 NVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLID---- 125
NV+RL V S K ++L ++ G+L + RL+ Q L+
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY-SRLETGPKHIPLQTLLKFMVD 155
Query: 126 ---GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
G+ Y N+ HRDL N +L
Sbjct: 156 IALGMEYLSNRNFLHRDLAA-----------------------------------RNCML 180
Query: 183 DSKGNIKISDFGLSA---LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
+ ++DFGLS ++R + ++A E LA+R Y + SD+W+ G
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV---KWIAIESLADRVYT-SKSDVWAFG 236
Query: 240 VILYVILT-GYLPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRITI 297
V ++ I T G P+ +Y + G K P+ ++ +P+ R T
Sbjct: 237 VTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 298 AGIK 301
+ ++
Sbjct: 297 SVLR 300
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 44/215 (20%)
Query: 64 EIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGEL--FDKIASKGRLQEAEGRKLFQ 121
E + + +HPN++RL V+ + + ++ E++ G L F ++ + G+ + + +
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLR 125
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
+ G+ Y HRDL NIL
Sbjct: 126 GIASGMRYLAEMSYVHRDLAA-----------------------------------RNIL 150
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSC 238
++S K+SDFGLS + D ++ G + APE +A R + A SD WS
Sbjct: 151 VNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSA-SDAWSY 209
Query: 239 GVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKLP 272
G++++ +++ G P+ D + + I D++LP
Sbjct: 210 GIVMWEVMSFGERPYWDMSNQDVINAI-EQDYRLP 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
V+ L + L S+ +VL Y+ G+L + I ++ + F Q+ G+ Y +K
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL N +LD K +K++DF
Sbjct: 172 KFVHRDLAA-----------------------------------RNCMLDEKFTVKVADF 196
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
GL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T G
Sbjct: 197 GL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGA 254
Query: 250 LPFDDRN 256
P+ D N
Sbjct: 255 PPYPDVN 261
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 150
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 151 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 175
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 176 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 233
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 234 GAPPYPDVN 242
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 142
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 143 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 167
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 168 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 225
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 226 GAPPYPDVN 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 147
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 148 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 172
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 173 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 230
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 231 GAPPYPDVN 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
V+ L + L S+ +VL Y+ G+L + I ++ + F Q+ G+ Y +K
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL N +LD K +K++DF
Sbjct: 171 KFVHRDLAA-----------------------------------RNCMLDEKFTVKVADF 195
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
GL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T G
Sbjct: 196 GL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGA 253
Query: 250 LPFDDRN 256
P+ D N
Sbjct: 254 PPYPDVN 260
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 148
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 149 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 173
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 174 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 231
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 232 GAPPYPDVN 240
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 64/319 (20%)
Query: 18 LGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK---REIATLKLLKHP 74
L R LGEG FGKV F + + P KIL + + + K RE L L+H
Sbjct: 17 LKRELGEGAFGKV-FLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE 75
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG-------------RLQEAEGRKLFQ 121
++V+ + V + MV EY+ G+L + + G L +++ + Q
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
Q+ G+ Y ++ HRDL N L EN+L
Sbjct: 136 QIAAGMVYLASQHFVHRDLAT-----------------------------RNCLVGENLL 166
Query: 182 LDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSC 238
+KI DFG+S ++R G HT ++ PE + R + SD+WS
Sbjct: 167 ------VKIGDFGMSRDVYSTDYYRVGG--HTML-PIRWMPPESIMYRKFT-TESDVWSL 216
Query: 239 GVILYVILT-GYLPFDDRNLAVLYQKIFRGD-FKLPKWLSPGAQNLLRKILEPNPVKRIT 296
GV+L+ I T G P+ + + + I +G + P+ L+ + P R
Sbjct: 217 GVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKN 276
Query: 297 IAGIKADEWFEQDYTPANP 315
I GI Q+ A+P
Sbjct: 277 IKGIHT---LLQNLAKASP 292
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 107/266 (40%), Gaps = 73/266 (27%)
Query: 15 RYELGRTLGEGNFGKVKFAQD-LDSGLPFAVKILEKNRIIH-LKITDQIKREIATLKLLK 72
RYE+ +G G++G V A D L+ + KIL R+ L +I REIA L L
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL---RVFEDLIDCKRILREIAILNRLN 110
Query: 73 HPNVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
H +VV++ +++ K ++Y+VLE + + + L E + L L+ GV
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
Y H+ G+ HRDLK N L++ +
Sbjct: 170 KYVHSAGILHRDLKPA-----------------------------------NCLVNQDCS 194
Query: 188 IKISDFGL-----------SALPQHFRDDGL-LHTTCGSPN-------------YVAPE- 221
+K+ DFGL S LP R+D + L T + N Y APE
Sbjct: 195 VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL 254
Query: 222 VLANRGYDGATSDIWSCGVILYVILT 247
+L Y A D+WS G I +L
Sbjct: 255 ILLQENYTEAI-DVWSIGCIFAELLN 279
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 72/265 (27%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y + +G G+FG V A+ DSG A+K + + + RE+ ++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 76 VVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQLI 124
+VRL S K ++Y+ VL+YV E ++A +K L + QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
++Y H+ G+ HRD+K +N+LLD
Sbjct: 133 RSLAYIHSFGICHRDIKP-----------------------------------QNLLLDP 157
Query: 185 KGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 158 DTAVLKLCDFGSAK--QLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGD 268
+L G Q IF GD
Sbjct: 215 ELLLG-------------QPIFPGD 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 150
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 151 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 175
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 176 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 233
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 234 GAPPYPDVN 242
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 149
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 150 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 174
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 175 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 232
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 233 GAPPYPDVN 241
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ Y
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLA 145
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 146 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 170
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 171 DFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 228
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 229 GAPPYPDVN 237
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 80/271 (29%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
K+ GM EL +G G FG+V A+ G + ++ ++ N ++ +RE+
Sbjct: 8 KRFGMDFKEIEL---IGSGGFGQVFKAKHRIDGKTYVIRRVKYN-------NEKAEREVK 57
Query: 67 TLKLLKHPNVVRLHEVL--------------------------ASKSK---IYMVLEYVT 97
L L H N+V + +S+SK +++ +E+
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 98 GGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQ 155
G L I + +L + +LF+Q+ GV Y H+K + HRDLK
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP------------- 164
Query: 156 VFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSP 215
NI L +KI DFGL ++DG + G+
Sbjct: 165 ----------------------SNIFLVDTKQVKIGDFGLVT---SLKNDGKRTRSKGTL 199
Query: 216 NYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
Y++PE ++++ Y G D+++ G+IL +L
Sbjct: 200 RYMSPEQISSQDY-GKEVDLYALGLILAELL 229
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 102/252 (40%), Gaps = 58/252 (23%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
RYE+ + +G+G FG+V A D A+K++ + H Q EI L+ L+
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 75 ------NVVRLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGRLQEAEGRKLFQQLIDG 126
NV+ + E ++ I M E ++ EL K +G RK ++
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQC 212
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H + H DLK ENILL +G
Sbjct: 213 LDALHKNRIIHCDLKP-----------------------------------ENILLKQQG 237
Query: 187 --NIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
IK+ DFG S+ +H R ++ S Y APEV+ Y G D+WS G IL
Sbjct: 238 RSGIKVIDFG-SSCYEHQR----VYXXIQSRFYRAPEVILGARY-GMPIDMWSLGCILAE 291
Query: 245 ILTGY--LPFDD 254
+LTGY LP +D
Sbjct: 292 LLTGYPLLPGED 303
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K+L +N K +I E + + P
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGVGSPY 80
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + +V + + G L D + ++GRL + Q+ G+SY +
Sbjct: 81 VSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ S ++KI+DFG
Sbjct: 140 LVHRDLAA-----------------------------------RNVLVKSPNHVKITDFG 164
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L D+ H G ++A E + R + SD+WS GV ++ ++T G P
Sbjct: 165 LARLLDI--DETEYHADGGKVPIKWMALESILRRRFT-HQSDVWSYGVTVWELMTFGAKP 221
Query: 252 FD 253
+D
Sbjct: 222 YD 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 179 NILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVL----ANRGYDGATSD 234
NILLD GNIK+ DFG+S D G Y+APE + + +GYD SD
Sbjct: 156 NILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYD-VRSD 211
Query: 235 IWSCGVILYVILTGYLPFDDRNLAVLYQ--KIFRGD 268
+WS G+ LY + TG P+ N +V Q ++ +GD
Sbjct: 212 VWSLGITLYELATGRFPYPKWN-SVFDQLTQVVKGD 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 126/320 (39%), Gaps = 81/320 (25%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y + +G G+FG V A+ DSG A+K + + + RE+ ++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 76 VVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIA-----SKGRLQEAEGRKLFQQLI 124
+VRL S K ++Y+ VL+YV ++A +K L + QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVY--RVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
++Y H+ G+ HRD+K +N+LLD
Sbjct: 133 RSLAYIHSFGICHRDIKP-----------------------------------QNLLLDP 157
Query: 185 KGNI-KISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ K+ DFG + Q R + + C S Y APE++ ++ D+WS G +L
Sbjct: 158 DTAVLKLCDFGSAK--QLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGD------FKLPKWLSPGAQNLLRKILEPNPVKRITI 297
+L G Q IF GD ++ K L + +R+ + PN
Sbjct: 215 ELLLG-------------QPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPN-YTEFAF 259
Query: 298 AGIKADEWFEQDYTPANPDD 317
IKA W + + P P +
Sbjct: 260 PQIKAHPW-TKVFRPRTPPE 278
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 98/248 (39%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K+
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKV 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D S+ E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDAT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 127/308 (41%), Gaps = 70/308 (22%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK----HPN 75
+ LG G+ G V F G P AVK + + D + +KLL HPN
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRM---------LIDFCDIALMEIKLLTESDDHPN 70
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG------RLQ-EAEGRKLFQQLIDGVS 128
V+R + + +Y+ LE + L D + SK +LQ E L +Q+ GV+
Sbjct: 71 VIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 129 YCHNKGVFHRDLKV--ILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H+ + HRDLK IL S R Q EN+
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQ------------------QTGAENL------ 165
Query: 187 NIKISDFGLS----ALPQHFRDDGLLHTTCGSPNYVAPEV------LANRGYDGATSDIW 236
I ISDFGL + FR + L+ G+ + APE+ L + + DI+
Sbjct: 166 RILISDFGLCKKLDSGQSSFRTN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223
Query: 237 SCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL-------PKWLSPGAQNLLRKILE 288
S G + Y IL+ G PF D+ I RG F L + L A +L+ ++++
Sbjct: 224 SMGCVFYYILSKGKHPFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMID 281
Query: 289 PNPVKRIT 296
+P+KR T
Sbjct: 282 HDPLKRPT 289
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 98/248 (39%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K+
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKV 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D S+ E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDAT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
V+ L + L S+ +VL Y+ G+L + I ++ + F Q+ G+ + +K
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL N +LD K +K++DF
Sbjct: 212 KFVHRDLAA-----------------------------------RNCMLDEKFTVKVADF 236
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
GL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T G
Sbjct: 237 GL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGA 294
Query: 250 LPFDDRN 256
P+ D N
Sbjct: 295 PPYPDVN 301
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 52/294 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V+EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARLI 164
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE A G SD+WS G++L + T G +P+
Sbjct: 165 ED--NEXTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
Query: 258 AVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 69/262 (26%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIH-LKITDQIKREIATLKLLKHP 74
YE+ +G G++G V A D ++ A+K + NR+ L +I REI L LK
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIK--KVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 75 NVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
++RLH+++ + ++Y+VLE + +L + L E + + L+ G +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H G+ HRDLK N LL+ ++K
Sbjct: 147 IHESGIIHRDLKP-----------------------------------ANCLLNQDCSVK 171
Query: 190 ISDFGLSALPQ-----HFRDDGLLHTTCGSPN------------------YVAPE-VLAN 225
I DFGL+ H +D P Y APE +L
Sbjct: 172 ICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ 231
Query: 226 RGYDGATSDIWSCGVILYVILT 247
Y + DIWS G I +L
Sbjct: 232 ENYTNSI-DIWSTGCIFAELLN 252
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 36/248 (14%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
RYE+ TLGEG FGKV D + G AVKI++ + + + EI L+ L
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLN 69
Query: 73 --HPN----VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRL--QEAEGRKLFQQLI 124
PN V++ E I +V E + G +D I G L + RK+ Q+
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
V++ H+ + H DLK + F+ + + + E L++
Sbjct: 129 KSVNFLHSNKLTHTDLKPE--------------NILFVQSDYTEAYNPKIKRDERTLINP 174
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+IK+ DFG + DD T + +Y APEV+ G+ D+WS G IL
Sbjct: 175 --DIKVVDFGSATY-----DDEHHSTLVSTRHYRAPEVILALGW-SQPCDVWSIGCILIE 226
Query: 245 ILTGYLPF 252
G+ F
Sbjct: 227 YYLGFTVF 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
V+ L + L S+ +VL Y+ G+L + I ++ + F Q+ G+ + +K
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL N +LD K +K++DF
Sbjct: 153 KFVHRDLAA-----------------------------------RNCMLDEKFTVKVADF 177
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
GL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T G
Sbjct: 178 GL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGA 235
Query: 250 LPFDDRN 256
P+ D N
Sbjct: 236 PPYPDVN 242
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ +
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLA 150
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 151 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 175
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 176 DFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 233
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 234 GAPPYPDVN 242
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 128/312 (41%), Gaps = 70/312 (22%)
Query: 20 RTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK----HPN 75
+ LG G+ G V F G P AVK + + D + +KLL HPN
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRM---------LIDFCDIALMEIKLLTESDDHPN 70
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKG------RLQ-EAEGRKLFQQLIDGVS 128
V+R + + +Y+ LE + L D + SK +LQ E L +Q+ GV+
Sbjct: 71 VIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 129 YCHNKGVFHRDLKV--ILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
+ H+ + HRDLK IL S R Q EN+
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQ------------------QTGAENL------ 165
Query: 187 NIKISDFGLS----ALPQHFRDDGLLHTTCGSPNYVAPEV------LANRGYDGATSDIW 236
I ISDFGL + FR + L+ G+ + APE+ L + + DI+
Sbjct: 166 RILISDFGLCKKLDSGQXXFRXN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223
Query: 237 SCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL-------PKWLSPGAQNLLRKILE 288
S G + Y IL+ G PF D+ I RG F L + L A +L+ ++++
Sbjct: 224 SMGCVFYYILSKGKHPFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMID 281
Query: 289 PNPVKRITIAGI 300
+P+KR T +
Sbjct: 282 HDPLKRPTAMKV 293
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ +
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLA 148
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 149 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 173
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 174 DFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 231
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 232 GAPPYPDVN 240
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 44/247 (17%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
V+ L + L S+ +VL Y+ G+L + I ++ + F Q+ G+ + +K
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRDL N +LD K +K++DF
Sbjct: 158 KFVHRDLAA-----------------------------------RNCMLDEKFTVKVADF 182
Query: 194 GLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
GL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T G
Sbjct: 183 GL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGA 240
Query: 250 LPFDDRN 256
P+ D N
Sbjct: 241 PPYPDVN 247
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 48/249 (19%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ +
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLA 151
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 152 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 176
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGL A + ++ +H G+ ++A E L + + SD+WS GV+L+ ++T
Sbjct: 177 DFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTR 234
Query: 248 GYLPFDDRN 256
G P+ D N
Sbjct: 235 GAPPYPDVN 243
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D S+ E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDAT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V+EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 52/251 (20%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G+FG V LD+ G + NRI + Q E +K HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 76 VVRLHEV-LASKSKIYMVLEYVTGGELFDKIASKGR---LQEAEGRKLFQQLIDGVSYCH 131
V+ L + L S+ +VL Y+ G+L + I ++ +++ G L Q+ G+ +
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLA 151
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+K HRDL N +LD K +K++
Sbjct: 152 SKKFVHRDLAA-----------------------------------RNCMLDEKFTVKVA 176
Query: 192 DFGLS--ALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
DFGL+ L + F +H G+ ++A E L + + SD+WS GV+L+ ++
Sbjct: 177 DFGLARDMLDKEFDS---VHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELM 232
Query: 247 T-GYLPFDDRN 256
T G P+ D N
Sbjct: 233 TRGAPPYPDVN 243
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 49/265 (18%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKR----EIATLKLLK 72
++ + +G G FG+V LP +I + + T++ +R E + +
Sbjct: 10 KIEQVIGAGEFGEVCSGH---LKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 66
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCH 131
HPNV+ L V+ + + ++ E++ G L + + G+ + + + + G+ Y
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ HR L NIL++S K+S
Sbjct: 127 DMNYVHR-----------------------------------ALAARNILVNSNLVCKVS 151
Query: 192 DFGLSALPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT- 247
DFGLS + D + G + APE + R + A SD+WS G++++ +++
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA-SDVWSYGIVMWEVMSY 210
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLP 272
G P+ D + I D++LP
Sbjct: 211 GERPYWDMTNQDVINAI-EQDYRLP 234
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI--QMELDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 XGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 162 DXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 214
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 99/254 (38%), Gaps = 66/254 (25%)
Query: 18 LGRTLGEGNFGKVKFAQDLD-----SGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L R LGEG FGKV A+ + + AVK L+ + K +RE L L+
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK---DFQREAELLTNLQ 75
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI----------------ASKGRLQEAEG 116
H ++V+ + V + MV EY+ G+L + +KG L ++
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
+ Q+ G+ Y ++ HRDL
Sbjct: 136 LHIASQIASGMVYLASQHFVHRDLAT---------------------------------- 161
Query: 177 LENILLDSKGNIKISDFGLSA---LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATS 233
N L+ + +KI DFG+S ++R G HT ++ PE + R + S
Sbjct: 162 -RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG--HTML-PIRWMPPESIMYRKFT-TES 216
Query: 234 DIWSCGVILYVILT 247
D+WS GVIL+ I T
Sbjct: 217 DVWSFGVILWEIFT 230
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKX 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI--QMELDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 XGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 162 DXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 214
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 72
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI--QMELDHERMSYLLYQML 129
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 130 XGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 154
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 155 DXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 207
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVI 231
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D S+ E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V+EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 17 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 72 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 131 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 154
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 155 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 210
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 211 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 263
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 106/273 (38%), Gaps = 68/273 (24%)
Query: 1 MVIAEKKQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITD- 59
MVI + K Y + LGEG F V + L G +A+K RI+ + D
Sbjct: 23 MVIIDNKH-------YLFIQKLGEGGFSYVDLVEGLHDGHFYALK-----RILCHEQQDR 70
Query: 60 -QIKREIATLKLLKHPNVVRLHEVL----ASKSKIYMVLEYVTGGELFDKI---ASKGR- 110
+ +RE +L HPN++RL +K + +++L + G L+++I KG
Sbjct: 71 EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF 130
Query: 111 LQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPW 170
L E + L + G+ H KG HRDLK
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPT--------------------------- 163
Query: 171 KFNVLQLENILLDSKGNIKISDFG--------LSALPQHFRDDGLLHTTCGSPNYVAPEV 222
NILL +G + D G + Q C + +Y APE+
Sbjct: 164 --------NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-TISYRAPEL 214
Query: 223 LANRGYD--GATSDIWSCGVILYVILTGYLPFD 253
+ + + +D+WS G +LY ++ G P+D
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 19 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 74 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 133 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 156
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 157 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 212
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 213 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 265
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 67/310 (21%)
Query: 17 ELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+ G+TLG G FGKV A D+ L AVK+L+ H + + E+ + L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHL 106
Query: 72 -KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQE-----------AEGRKL 119
+H N+V L + ++ EY G+L + + K R+ E A R L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 120 FQ---QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
Q+ G+++ +K HRD+
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAA---------------------------------- 192
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRGYDGATS 233
N+LL + KI DFGL+ + +D ++ P ++APE + + Y S
Sbjct: 193 -RNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQS 247
Query: 234 DIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPN 290
D+WS G++L+ I + G P+ + + K+ + +++ P + ++++
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 307
Query: 291 PVKRITIAGI 300
P R T I
Sbjct: 308 PTHRPTFQQI 317
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 71/316 (22%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
R G+TLG G FGKV A D+ + AVK+L+ + HL + + E+ L
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLS 97
Query: 70 LL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK------------------GR 110
L H N+V L ++ EY G+L + + K
Sbjct: 98 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 111 LQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPW 170
L + Q+ G+++ +K HRDL
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA---------------------------- 189
Query: 171 KFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRG 227
NILL KI DFGL+ + ++D ++ P ++APE + N
Sbjct: 190 -------RNILLTHGRITKICDFGLA---RDIKNDSNYVVKGNARLPVKWMAPESIFNCV 239
Query: 228 YDGATSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLR 284
Y SD+WS G+ L+ + + G P+ + + K+ + F++ P+ ++++
Sbjct: 240 YT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 298
Query: 285 KILEPNPVKRITIAGI 300
+ +P+KR T I
Sbjct: 299 TCWDADPLKRPTFKQI 314
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 15 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 70 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 129 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 152
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 153 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 208
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 209 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 261
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 192 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 247 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 306 LRAA-----------------------------NILVGENLV------CKVADFGLARLI 330
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 331 ----EDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 386 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 438
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 52/294 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 23 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY+ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 137 LRAA-----------------------------NILVGENLV------CKVADFGLARLI 161
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE A G SD+WS G++L + T G +P+
Sbjct: 162 ED--NEWTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 218
Query: 258 AVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 219 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 269
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 275 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 330 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 389 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 412
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 413 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 469 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 521
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 74/252 (29%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
Y + +G G+FG V A+ ++S K+L+ R + RE+ ++++KHPN
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN--------RELQIMRIVKHPN 93
Query: 76 VVRLHEVLAS----KSKIYM--VLEYVTGGELFDKIASKGRLQEAEGRKLFQ----QLID 125
VV L S K ++++ VLEYV ++ +L++ L + QL+
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 126 GVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD-S 184
++Y H+ G+ HRD+K +N+LLD
Sbjct: 153 SLAYIHSIGICHRDIKP-----------------------------------QNLLLDPP 177
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPN--------YVAPEVLANRGYDGATSDIW 236
G +K+ DFG + + G PN Y APE++ DIW
Sbjct: 178 SGVLKLIDFGSAKI-----------LIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIW 226
Query: 237 SCGVILYVILTG 248
S G ++ ++ G
Sbjct: 227 STGCVMAELMQG 238
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 192 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 247 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 306 LRAA-----------------------------NILVGENLV------CKVADFGLARLI 330
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 331 ----EDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 386 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 438
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 71/316 (22%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
R G+TLG G FGKV A D+ + AVK+L+ + HL + + E+ L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLS 104
Query: 70 LL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK------------------GR 110
L H N+V L ++ EY G+L + + K
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 111 LQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPW 170
L + Q+ G+++ +K HRDL
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA---------------------------- 196
Query: 171 KFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRG 227
NILL KI DFGL+ + ++D ++ P ++APE + N
Sbjct: 197 -------RNILLTHGRITKICDFGLA---RDIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 228 YDGATSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLR 284
Y SD+WS G+ L+ + + G P+ + + K+ + F++ P+ ++++
Sbjct: 247 YT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 305
Query: 285 KILEPNPVKRITIAGI 300
+ +P+KR T I
Sbjct: 306 TCWDADPLKRPTFKQI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 80
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 137
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 138 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 162
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 163 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 215
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 216 MGEMVRHKILFPGRDYIDQWNKVI 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 50/239 (20%)
Query: 22 LGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
LG GNFG V+ + + A+K+L++ T+++ RE + L +P +VRL
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASK-GRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
V +++ + +V+E GG L + K + + +L Q+ G+ Y K HR
Sbjct: 76 IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS-A 197
DL N+LL ++ KISDFGLS A
Sbjct: 135 DLAA-----------------------------------RNVLLVNRHYAKISDFGLSKA 159
Query: 198 LPQHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPF 252
L DD + APE + R + + SD+WS GV ++ L+ G P+
Sbjct: 160 LGA---DDSYYTARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPY 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 71/316 (22%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
R G+TLG G FGKV A D+ + AVK+L+ + HL + + E+ L
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLS 81
Query: 70 LL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK------------------GR 110
L H N+V L ++ EY G+L + + K
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 111 LQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPW 170
L + Q+ G+++ +K HRDL
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA---------------------------- 173
Query: 171 KFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRG 227
NILL KI DFGL+ + ++D ++ P ++APE + N
Sbjct: 174 -------RNILLTHGRITKICDFGLA---RDIKNDSNYVVKGNARLPVKWMAPESIFNCV 223
Query: 228 YDGATSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLR 284
Y SD+WS G+ L+ + + G P+ + + K+ + F++ P+ ++++
Sbjct: 224 YT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 282
Query: 285 KILEPNPVKRITIAGI 300
+ +P+KR T I
Sbjct: 283 TCWDADPLKRPTFKQI 298
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 36/248 (14%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDS-GLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
RYE+ TLGEG FGKV D + G AVKI++ + + + EI L+ L
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLN 69
Query: 73 --HPN----VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRL--QEAEGRKLFQQLI 124
PN V++ E I +V E + G +D I G L + RK+ Q+
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
V++ H+ + H DLK + F+ + + + E L++
Sbjct: 129 KSVNFLHSNKLTHTDLKPE--------------NILFVQSDYTEAYNPKIKRDERTLINP 174
Query: 185 KGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+IK+ DFG + DD T +Y APEV+ G+ D+WS G IL
Sbjct: 175 --DIKVVDFGSATY-----DDEHHSTLVXXRHYRAPEVILALGW-SQPCDVWSIGCILIE 226
Query: 245 ILTGYLPF 252
G+ F
Sbjct: 227 YYLGFTVF 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 162 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 214
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 63/306 (20%)
Query: 17 ELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+ G+TLG G FGKV A D+ L AVK+L+ H + + E+ + L
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHL 98
Query: 72 -KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKL--------F 120
+H N+V L + ++ EY G+L + + K L + +GR L
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
Q+ G+++ +K HRD+ N+
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAA-----------------------------------RNV 183
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRGYDGATSDIWS 237
LL + KI DFGL+ + +D ++ P ++APE + + Y SD+WS
Sbjct: 184 LLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWS 239
Query: 238 CGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
G++L+ I + G P+ + + K+ + +++ P + ++++ P R
Sbjct: 240 YGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 299
Query: 295 ITIAGI 300
T I
Sbjct: 300 PTFQQI 305
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 162 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 214
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 71/316 (22%)
Query: 15 RYELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLK 69
R G+TLG G FGKV A D+ + AVK+L+ + HL + + E+ L
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLS 99
Query: 70 LL-KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK------------------GR 110
L H N+V L ++ EY G+L + + K
Sbjct: 100 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 111 LQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPW 170
L + Q+ G+++ +K HRDL
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA---------------------------- 191
Query: 171 KFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRG 227
NILL KI DFGL+ + ++D ++ P ++APE + N
Sbjct: 192 -------RNILLTHGRITKICDFGLA---RDIKNDSNYVVKGNARLPVKWMAPESIFNCV 241
Query: 228 YDGATSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLR 284
Y SD+WS G+ L+ + + G P+ + + K+ + F++ P+ ++++
Sbjct: 242 YT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 300
Query: 285 KILEPNPVKRITIAGI 300
+ +P+KR T I
Sbjct: 301 TCWDADPLKRPTFKQI 316
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 80
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 137
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 138 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 162
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 163 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 215
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 216 MGEMVRHKILFPGRDYIDQWNKVI 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 63/306 (20%)
Query: 17 ELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+ G+TLG G FGKV A D+ L AVK+L+ H + + E+ + L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHL 106
Query: 72 -KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKL--------F 120
+H N+V L + ++ EY G+L + + K L + +GR L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 121 QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENI 180
Q+ G+++ +K HRD+ N+
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAA-----------------------------------RNV 191
Query: 181 LLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRGYDGATSDIWS 237
LL + KI DFGL+ + +D ++ P ++APE + + Y SD+WS
Sbjct: 192 LLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWS 247
Query: 238 CGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPNPVKR 294
G++L+ I + G P+ + + K+ + +++ P + ++++ P R
Sbjct: 248 YGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 307
Query: 295 ITIAGI 300
T I
Sbjct: 308 PTFQQI 313
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 73
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 130
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 131 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 155
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 156 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 208
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 209 MGEMVRHKILFPGRDYIDQWNKVI 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 72
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 129
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 130 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 154
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 155 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 207
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVI 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 78
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 135
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 136 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 160
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 161 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 213
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 214 MGEMVRHKILFPGRDYIDQWNKVI 237
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 23 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY+ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 137 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 160
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 161 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 217 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 269
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 53/261 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMEPEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPFDDRNLAVLYQKIF 265
++ + F R+ + K+
Sbjct: 218 MVCHKILFPGRDYIDQWNKVI 238
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 102/263 (38%), Gaps = 59/263 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 117
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 174
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 175 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 199
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 200 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 252
Query: 242 LYVILTGYLPFDDRNLAVLYQKI 264
+ ++ + F R+ + K+
Sbjct: 253 MGEMVRHKILFPGRDYIDQWNKV 275
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 73
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 130
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 131 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 155
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 156 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCI 208
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 209 MGEMVRHKILFPGRDYIDQWNKVI 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 117
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 174
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 175 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 199
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 200 DCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 252
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 253 MGEMVRHKILFPGRDYIDQWNKVI 276
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 193 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGNMS----PEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 248 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL L
Sbjct: 307 LRAA-----------------------------NILVGENLV------CKVADFGLGRLI 331
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 332 ----EDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 386
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 387 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 439
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 102/264 (38%), Gaps = 59/264 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKX 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI--QMELDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 162 DXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 214
Query: 242 LYVILTGYLPFDDRNLAVLYQKIF 265
+ ++ + F R+ + K+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 102/263 (38%), Gaps = 59/263 (22%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK---RAYRELVLMKX 79
Query: 71 LKHPNVVRLHEVLASKSK------IYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLI 124
+ H N++ L V + +Y+V+E + L I + L L Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQML 136
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
G+ + H+ G+ HRDLK NI++ S
Sbjct: 137 CGIKHLHSAGIIHRDLKP-----------------------------------SNIVVKS 161
Query: 185 KGNIKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I
Sbjct: 162 DXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCI 214
Query: 242 LYVILTGYLPFDDRNLAVLYQKI 264
+ ++ + F R+ + K+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKV 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K ++H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L N+L EN++ K++DFGL+ L
Sbjct: 140 LAAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 26 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VLASKSKIYMVLEYVTGGELFDKIASK-GR-LQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D + + G+ L+ + + Q+ G++Y HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 140 LRAA-----------------------------NILVGENLV------CKVADFGLARL- 163
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 164 ---IEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + +P +R T ++A F +DY
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQA---FLEDY 272
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 122/310 (39%), Gaps = 67/310 (21%)
Query: 17 ELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+ G+TLG G FGKV A D+ L AVK+L+ H + + E+ + L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHL 106
Query: 72 -KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAE-----------GRKL 119
+H N+V L + ++ EY G+L + + K R+ E + R L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 120 FQ---QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
Q+ G+++ +K HRD+
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAA---------------------------------- 192
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRGYDGATS 233
N+LL + KI DFGL+ + +D ++ P ++APE + + Y S
Sbjct: 193 -RNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQS 247
Query: 234 DIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILEPN 290
D+WS G++L+ I + G P+ + + K+ + +++ P + ++++
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 307
Query: 291 PVKRITIAGI 300
P R T I
Sbjct: 308 PTHRPTFQQI 317
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 56/296 (18%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 192 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ IY+V EY++ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 247 VV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 306 LRAA-----------------------------NILVGENLV------CKVADFGLARLI 330
Query: 200 QHFRDDGLLHTTCGSP---NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDR 255
+D G+ + APE A G SD+WS G++L + T G +P+
Sbjct: 331 ----EDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 256 NLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 386 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 438
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 217
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 218 MIKGGVLF 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 53/261 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 79
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 140 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 164
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY D+WS G I+
Sbjct: 165 LKILDFGLA------RTAGTSFMMEPEVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGE 217
Query: 245 ILTGYLPFDDRNLAVLYQKIF 265
++ + F R+ + K+
Sbjct: 218 MVCHKILFPGRDYIDQWNKVI 238
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 80
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 141 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 165
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 166 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 218
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 219 MIKGGVLF 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 76/270 (28%)
Query: 17 ELGRTLGEGNFGKVKFAQDLDSGLPF------AVKILEKNRIIHLKITDQIKREIATLKL 70
E R +GEG FG+V F LP+ AVK+L++ ++ +RE A +
Sbjct: 50 EYVRDIGEGAFGRV-FQARAPGLLPYEPFTMVAVKMLKEEASADMQA--DFQREAALMAE 106
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFD----------------------KIASK 108
+PN+V+L V A + ++ EY+ G+L + +++S
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 109 G--RLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIV 166
G L AE + +Q+ G++Y + HRDL
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT------------------------ 202
Query: 167 IRPWKFNVLQLENILLDSKGNIKISDFGLS---ALPQHFRDDGLLHTTCGSPNYVAPEVL 223
N L+ +KI+DFGLS +++ DG ++ PE +
Sbjct: 203 -----------RNCLVGENMVVKIADFGLSRNIYSADYYKADG---NDAIPIRWMPPESI 248
Query: 224 ANRGYDGATSDIWSCGVILYVILT-GYLPF 252
Y SD+W+ GV+L+ I + G P+
Sbjct: 249 FYNRYT-TESDVWAYGVVLWEIFSYGLQPY 277
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 47/286 (16%)
Query: 20 RTLGEGNFGKVKFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNV 76
R +G+G+FG V + +D + A+K L +RI ++ + RE ++ L HPNV
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 77 VRLHEVLASKSKI-YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNKG 134
+ L ++ + +++L Y+ G+L I S R + F Q+ G+ Y +
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
HRDL N +LD +K++DFG
Sbjct: 145 FVHRDLAA-----------------------------------RNCMLDESFTVKVADFG 169
Query: 195 LS--ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L + + + A E L + SD+WS GV+L+ +LT G P
Sbjct: 170 LARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT-TKSDVWSFGVLLWELLTRGAPP 228
Query: 252 FDDRNLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRIT 296
+ + L + +G P++ ++++ E +P R T
Sbjct: 229 YRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPT 274
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 72/271 (26%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAV-KILEKNRIIHLKITDQIKREIATLKLL 71
+ R+++ R G+G FG V+ ++ +G+ A+ K+++ R + ++ QI +++A +L
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL--QIMQDLA---VL 76
Query: 72 KHPNVVRLHEVLAS-----KSKIYM--VLEYVTGGELFDKIASKGRLQEAEGRKLFQ--- 121
HPN+V+L + + IY+ V+EYV L + R Q A L +
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 122 -QLIDGVSYCH--NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLE 178
QLI + H + V HRD+K NVL E
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIK-----------------------------PHNVLVNE 166
Query: 179 NILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPE-VLANRGYDGATSDIWS 237
+ G +K+ DFG SA + + + S Y APE + N+ Y A DIWS
Sbjct: 167 -----ADGTLKLCDFG-SAKKLSPSEPNVAYIC--SRYYRAPELIFGNQHYTTAV-DIWS 217
Query: 238 CGVILYVILTGYLPFDDRNLAVLYQKIFRGD 268
G I ++ G + IFRGD
Sbjct: 218 VGCIFAEMMLG-------------EPIFRGD 235
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 53/261 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 84
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 145 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 169
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY D+WS G I+
Sbjct: 170 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGE 222
Query: 245 ILTGYLPFDDRNLAVLYQKIF 265
++ + F R+ + K+
Sbjct: 223 MVCHKILFPGRDYIDQWNKVI 243
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 81
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 141
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 142 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 166
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY DIWS G I+
Sbjct: 167 LKILDFGLA------RTAGTSFMMVPFVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGE 219
Query: 245 ILTGYLPF 252
++ G + F
Sbjct: 220 MIKGGVLF 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 53/261 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEK--NRIIHLKITDQIKREIATLKL 70
L RY+ + +G G G V A D A+K L + H K + RE+ +K
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK---RAYRELVLMKC 73
Query: 71 LKHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRK---LFQQLIDGV 127
+ H N++ L V + + + EL D + E + + L Q++ G+
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
+ H+ G+ HRDLK NI++ S
Sbjct: 134 KHLHSAGIIHRDLKP-----------------------------------SNIVVKSDCT 158
Query: 188 IKISDFGLSALPQHFRDDG---LLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYV 244
+KI DFGL+ R G ++ + Y APEV+ GY D+WS G I+
Sbjct: 159 LKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGE 211
Query: 245 ILTGYLPFDDRNLAVLYQKIF 265
++ + F R+ + K+
Sbjct: 212 MVCHKILFPGRDYIDQWNKVI 232
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 63/304 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLLKHPNVVR 78
LGEG FGKV F + + LP K+L + + +RE L +L+H ++VR
Sbjct: 26 LGEGAFGKV-FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIASK---------------GRLQEAEGRKLFQQL 123
V + MV EY+ G+L + S G L + + Q+
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
G+ Y HRDL N L+
Sbjct: 145 AAGMVYLAGLHFVHRDLAT-----------------------------------RNCLVG 169
Query: 184 SKGNIKISDFGLSA---LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI DFG+S ++R G T ++ PE + R + SD+WS GV
Sbjct: 170 QGLVVKIGDFGMSRDIYSTDYYRVGG---RTMLPIRWMPPESILYRKFT-TESDVWSFGV 225
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIA 298
+L+ I T G P+ + I +G + + P+ P ++R + P +R +I
Sbjct: 226 VLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 285
Query: 299 GIKA 302
+ A
Sbjct: 286 DVHA 289
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 50/239 (20%)
Query: 22 LGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRL 79
LG GNFG V+ + + A+K+L++ T+++ RE + L +P +VRL
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 80 HEVLASKSKIYMVLEYVTGGELFDKIASK-GRLQEAEGRKLFQQLIDGVSYCHNKGVFHR 138
V +++ + +V+E GG L + K + + +L Q+ G+ Y K HR
Sbjct: 402 IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 139 DLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSAL 198
+L N+LL ++ KISDFGLS
Sbjct: 461 NLAA-----------------------------------RNVLLVNRHYAKISDFGLS-- 483
Query: 199 PQHFRDDGLLHTTCGSP----NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPF 252
+ D +T + + APE + R + + SD+WS GV ++ L+ G P+
Sbjct: 484 -KALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPY 540
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 52/294 (17%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLHE 81
LG+G FG+V + + A+K L+ + + +E +K L+H +V+L+
Sbjct: 16 LGQGCFGEV-WMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 82 VLASKSKIYMVLEYVTGGELFD--KIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRD 139
V+ S+ I +V EY++ G L D K + L+ + + Q+ G++Y HRD
Sbjct: 71 VV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 140 LKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALP 199
L+ N+L EN++ K++DFGL+ L
Sbjct: 130 LRAA-----------------------------NILVGENLV------CKVADFGLARLI 154
Query: 200 QHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFDDRNL 257
+ ++ P + APE A G SD+WS G++L + T G +P+
Sbjct: 155 ED--NEXTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 211
Query: 258 AVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIAGIKADEWFEQDY 310
+ ++ RG P +L+ + P +R T ++A F +DY
Sbjct: 212 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA---FLEDY 262
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 63/304 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLLKHPNVVR 78
LGEG FGKV F + + LP K+L + + +RE L +L+H ++VR
Sbjct: 20 LGEGAFGKV-FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIASK---------------GRLQEAEGRKLFQQL 123
V + MV EY+ G+L + S G L + + Q+
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
G+ Y HRDL N L+
Sbjct: 139 AAGMVYLAGLHFVHRDLAT-----------------------------------RNCLVG 163
Query: 184 SKGNIKISDFGLSA---LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI DFG+S ++R G T ++ PE + R + SD+WS GV
Sbjct: 164 QGLVVKIGDFGMSRDIYSTDYYRVGG---RTMLPIRWMPPESILYRKFT-TESDVWSFGV 219
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIA 298
+L+ I T G P+ + I +G + + P+ P ++R + P +R +I
Sbjct: 220 VLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 279
Query: 299 GIKA 302
+ A
Sbjct: 280 DVHA 283
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 63/304 (20%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRII---HLKITDQIKREIATLKLLKHPNVVR 78
LGEG FGKV F + + LP K+L + + +RE L +L+H ++VR
Sbjct: 49 LGEGAFGKV-FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 79 LHEVLASKSKIYMVLEYVTGGELFDKIASK---------------GRLQEAEGRKLFQQL 123
V + MV EY+ G+L + S G L + + Q+
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
G+ Y HRDL N L+
Sbjct: 168 AAGMVYLAGLHFVHRDLAT-----------------------------------RNCLVG 192
Query: 184 SKGNIKISDFGLSA---LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGV 240
+KI DFG+S ++R G T ++ PE + R + SD+WS GV
Sbjct: 193 QGLVVKIGDFGMSRDIYSTDYYRVGG---RTMLPIRWMPPESILYRKFT-TESDVWSFGV 248
Query: 241 ILYVILT-GYLPFDDRNLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKRITIA 298
+L+ I T G P+ + I +G + + P+ P ++R + P +R +I
Sbjct: 249 VLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 308
Query: 299 GIKA 302
+ A
Sbjct: 309 DVHA 312
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH-P 74
Y+L R LG G + +V A ++ + VKIL+ + ++IKREI L+ L+ P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLRGGP 92
Query: 75 NVVRLHEVL---ASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
N++ L +++ S++ +V E+V + F ++ L + + R +++ + YCH
Sbjct: 93 NIITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG-NIKI 190
+ G+ HRD+K N+++D + +++
Sbjct: 149 SMGIMHRDVKP-----------------------------------HNVMIDHEHRKLRL 173
Query: 191 SDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYL 250
D+GL+ + + S + PE+L + + D+WS G +L ++
Sbjct: 174 IDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 251 PF 252
PF
Sbjct: 231 PF 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 64/258 (24%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIH-LKITDQIKREIATLKLLKHP 74
Y + +G G++G V A D ++ A+K + NR+ L +I REI L LK
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIK--KVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 75 NVVRLHEVLASKS-----KIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSY 129
++RL++++ ++Y+VLE + +L + L E + + L+ G ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H G+ HRDLK N LL+ ++K
Sbjct: 145 IHESGIIHRDLKP-----------------------------------ANCLLNQDCSVK 169
Query: 190 ISDFGLSALPQHFRDDGLL-----HTTCGSPN---------------YVAPEVLANRGYD 229
+ DFGL+ +D ++ + G N Y APE++ +
Sbjct: 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 229
Query: 230 GATSDIWSCGVILYVILT 247
+ DIWS G I +L
Sbjct: 230 TKSIDIWSTGCIFAELLN 247
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 110/297 (37%), Gaps = 94/297 (31%)
Query: 17 ELGRTLGEGNFGKVKFA-----QDLDSGLPFAVKILEKNRIIHLKITDQIKRE--IATLK 69
E G+ LG G FGKV A + AVK+L++ D +RE ++ LK
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK-------ADSSEREALMSELK 100
Query: 70 LL----KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--------------GRL 111
++ H N+V L IY++ EY G+L + + SK RL
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 112 QEAEGRKLFQ---------QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFL 162
+E E + Q+ G+ + K HRDL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA-------------------- 200
Query: 163 LMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRD-----DGLLHTTCGSP-N 216
N+L+ +KI DFGL+ RD + ++ P
Sbjct: 201 ---------------RNVLVTHGKVVKICDFGLA------RDIMSDSNYVVRGNARLPVK 239
Query: 217 YVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD----DRNLAVLYQKIFRGD 268
++APE L G SD+WS G++L+ I + G P+ D N L Q F+ D
Sbjct: 240 WMAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD 295
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 101/280 (36%), Gaps = 71/280 (25%)
Query: 2 VIAEKKQEGMR---LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK-- 56
+I + KQ ++ L LGE FGKV G F E+ + + +K
Sbjct: 11 LINQHKQAKLKEISLSAVRFMEELGEDRFGKVY------KGHLFGPAPGEQTQAVAIKTL 64
Query: 57 -------ITDQIKREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGELF------- 102
+ ++ + E L+HPNVV L V+ + M+ Y + G+L
Sbjct: 65 KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS 124
Query: 103 ---------DKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIAT 153
D K L+ + L Q+ G+ Y + V H+DL
Sbjct: 125 PHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT----------- 173
Query: 154 LQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCG 213
N+L+ K N+KISD GL LL +
Sbjct: 174 ------------------------RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 214 SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPF 252
++APE + G SDIWS GV+L+ + + G P+
Sbjct: 210 PIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 22 LGEGNFGKV-KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
+G G FG V K + LD G +A+K +K + + ++ A L +H +VVR
Sbjct: 17 IGSGEFGSVFKCVKRLD-GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 81 EVLASKSKIYMVLEYVTGGELFDKIASKGRL----QEAEGRKLFQQLIDGVSYCHNKGVF 136
A + + EY GG L D I+ R+ +EAE + L Q+ G+ Y H+ +
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 135
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
H D +K ++ I+ + P + E+ +K KI D G
Sbjct: 136 HMD----IKPSNIFISRTSI------------PNAASEEGDEDDWASNKVMFKIGDLG-- 177
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRN 256
H G ++A EVL +DI++ + + V G P RN
Sbjct: 178 ----HVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL-PRN 231
Query: 257 LAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKR 294
+ +I +G ++P+ LS LL+ ++ P+P +R
Sbjct: 232 -GDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERR 269
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 22 LGEGNFGKV-KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
+G G FG V K + LD G +A+K +K + + ++ A L +H +VVR
Sbjct: 17 IGSGEFGSVFKCVKRLD-GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 81 EVLASKSKIYMVLEYVTGGELFDKIASKGRL----QEAEGRKLFQQLIDGVSYCHNKGVF 136
A + + EY GG L D I+ R+ +EAE + L Q+ G+ Y H+ +
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 135
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
H D +K ++ I+ + P + E+ +K KI D G
Sbjct: 136 HMD----IKPSNIFISRTSI------------PNAASEEGDEDDWASNKVMFKIGDLG-- 177
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRN 256
H G ++A EVL +DI++ + + V G P RN
Sbjct: 178 ----HVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL-PRN 231
Query: 257 LAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKR 294
+ +I +G ++P+ LS LL+ ++ P+P +R
Sbjct: 232 -GDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERR 269
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 22 LGEGNFGKV-KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
+G G FG V K + LD G +A+K +K + + ++ A L +H +VVR
Sbjct: 19 IGSGEFGSVFKCVKRLD-GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77
Query: 81 EVLASKSKIYMVLEYVTGGELFDKIASKGRL----QEAEGRKLFQQLIDGVSYCHNKGVF 136
A + + EY GG L D I+ R+ +EAE + L Q+ G+ Y H+ +
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
H D +K ++ I+ + P + E+ +K KI D G
Sbjct: 138 HMD----IKPSNIFISRTSI------------PNAASEEGDEDDWASNKVMFKIGDLG-- 179
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRN 256
H G ++A EVL +DI++ + + V G P RN
Sbjct: 180 ----HVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL-PRN 233
Query: 257 LAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKR 294
+ +I +G ++P+ LS LL+ ++ P+P +R
Sbjct: 234 -GDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERR 271
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 22 LGEGNFGKV-KFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVVRLH 80
+G G FG V K + LD G +A+K +K + + ++ A L +H +VVR
Sbjct: 15 IGSGEFGSVFKCVKRLD-GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 73
Query: 81 EVLASKSKIYMVLEYVTGGELFDKIASKGRL----QEAEGRKLFQQLIDGVSYCHNKGVF 136
A + + EY GG L D I+ R+ +EAE + L Q+ G+ Y H+ +
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 133
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
H D +K ++ I+ + P + E+ +K KI D G
Sbjct: 134 HMD----IKPSNIFISRTSI------------PNAASEEGDEDDWASNKVMFKIGDLG-- 175
Query: 197 ALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRN 256
H G ++A EVL +DI++ + + V G P RN
Sbjct: 176 ----HVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPL-PRN 229
Query: 257 LAVLYQKIFRGDF-KLPKWLSPGAQNLLRKILEPNPVKR 294
+ +I +G ++P+ LS LL+ ++ P+P +R
Sbjct: 230 -GDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERR 267
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 53/259 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILE--KNRIIHLKITDQIKREIATLKLLKH 73
+ LG G FG V + G +P +K++E R +TD + + L H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM----LAIGSLDH 92
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHN 132
++VRL L S + +V +Y+ G L D + +G L Q+ G+ Y
Sbjct: 93 AHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
G+ HR+L N+LL S ++++D
Sbjct: 152 HGMVHRNLAA-----------------------------------RNVLLKSPSQVQVAD 176
Query: 193 FGLS-ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FG++ LP D LL++ +P ++A E + Y SD+WS GV ++ ++T G
Sbjct: 177 FGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGKYT-HQSDVWSYGVTVWELMTFGA 233
Query: 250 LPFDDRNLAVLYQKIFRGD 268
P+ LA + + +G+
Sbjct: 234 EPYAGLRLAEVPDLLEKGE 252
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 122/327 (37%), Gaps = 98/327 (29%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKIL------EKNRIIHLKITDQIKREIATLKLLKHPN 75
+G G G+V + +G AVK + E+N+ I + + LK P
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-------VVLKSHDCPY 85
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSYCHNK 133
+V+ + + +++ +E + G +K+ + G + E K+ ++ + Y K
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 134 -GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
GV HRD+K NILLD +G IK+ D
Sbjct: 144 HGVIHRDVKP-----------------------------------SNILLDERGQIKLCD 168
Query: 193 FGLSALPQHFRDDGLLHTTCGSPNYVAPEVL-----ANRGYDGATSDIWSCGVILYVILT 247
FG+S DD + G Y+APE + YD +D+WS G+ L + T
Sbjct: 169 FGISG---RLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD-IRADVWSLGISLVELAT 224
Query: 248 GYLPFDD--RNLAVLYQKI------------FRGDF-------------KLPKWLSPGAQ 280
G P+ + + VL + + F GDF K PK+
Sbjct: 225 GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKY------ 278
Query: 281 NLLRKILEPNPVKRITIAGIKADEWFE 307
K+LE + +KR + WF+
Sbjct: 279 ---NKLLEHSFIKRYETLEVDVASWFK 302
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 68/257 (26%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLK---------ITDQIKREIATLKLLK 72
LGE FGKV G F E+ + + +K + ++ + E L+
Sbjct: 17 LGEDRFGKVY------KGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ 70
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELF----------------DKIASKGRLQEAEG 116
HPNVV L V+ + M+ Y + G+L D K L+ +
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 117 RKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ 176
L Q+ G+ Y + V H+DL
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLAT---------------------------------- 156
Query: 177 LENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIW 236
N+L+ K N+KISD GL LL + ++APE + G SDIW
Sbjct: 157 -RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM-YGKFSIDSDIW 214
Query: 237 SCGVILYVILT-GYLPF 252
S GV+L+ + + G P+
Sbjct: 215 SYGVVLWEVFSYGLQPY 231
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 76 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 135 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 159
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 160 ALRADENXYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 92 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 151 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 175
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 176 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 92 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 151 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 175
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 176 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 221
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 53/249 (21%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILE--KNRIIHLKITDQIKREIATLKLLKH 73
+ LG G FG V + G +P +K++E R +TD + + L H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM----LAIGSLDH 74
Query: 74 PNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHN 132
++VRL L S + +V +Y+ G L D + +G L Q+ G+ Y
Sbjct: 75 AHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 133 KGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISD 192
G+ HR+L N+LL S ++++D
Sbjct: 134 HGMVHRNLAA-----------------------------------RNVLLKSPSQVQVAD 158
Query: 193 FGLS-ALPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GY 249
FG++ LP D LL++ +P ++A E + Y SD+WS GV ++ ++T G
Sbjct: 159 FGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGKYT-HQSDVWSYGVTVWELMTFGA 215
Query: 250 LPFDDRNLA 258
P+ LA
Sbjct: 216 EPYAGLRLA 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 88/233 (37%), Gaps = 49/233 (21%)
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG----ELFDKIASKGRLQEAEGRKLFQQL 123
L +HP++V L ++++ ++ +Y+ G L+ + + ++
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
G+ Y H + + HRD+K I NILLD
Sbjct: 149 ARGLHYLHTRAIIHRDVKSI-----------------------------------NILLD 173
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
KI+DFG+S L G+ Y+ PE +G SD++S GV+L+
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLF 232
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQN-LLRKILEPNPVKRI 295
+L + + Q + R L +W N L +I++PN +I
Sbjct: 233 EVLCAR--------SAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 56/244 (22%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA----TLKLLKHPNVV 77
LG G +G V+ + + SG AVK RI + + KR + +++ + P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVK-----RIRATVNSQEQKRLLMDLDISMRTVDCPFTV 69
Query: 78 RLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNK- 133
+ L + +++ +E + + + ++ KG+ + E K+ ++ + + H+K
Sbjct: 70 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
V HRD+K N+L+++ G +K+ DF
Sbjct: 130 SVIHRDVKP-----------------------------------SNVLINALGQVKMCDF 154
Query: 194 GLSALPQHFRDDGLLHTTCGSPNYVAPE----VLANRGYDGATSDIWSCGVILYVILTGY 249
G+S + DD G Y+APE L +GY SDIWS G+ + +
Sbjct: 155 GISG---YLVDDVAKDIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILR 210
Query: 250 LPFD 253
P+D
Sbjct: 211 FPYD 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 90 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 149 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 173
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 174 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 219
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 33/255 (12%)
Query: 8 QEGMRLGR-YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA 66
++GM L + + R +G+G FG+V Q +D+ +AVK++ + K T K E
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK----KYTRSAKIEAD 83
Query: 67 TLKLLKHPNVVRLHEVLASKSKIY---MVLEYVTGGELFDKIASKGRLQ--EAEGRKLFQ 121
LK +++ ++ + V +Y M L + G +I ++ E KL+
Sbjct: 84 ILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYC 143
Query: 122 -QLIDGVSYCHNKGVFHRDLK---VILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQL 177
+++ ++Y + H DLK ++L + + + V +T I I K
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK------ 197
Query: 178 ENILLDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
S G IK+ DFG + + + + Y APEV+ N G+D +SD+WS
Sbjct: 198 ------STG-IKLIDFGCATFKSDYHG-----SIINTRQYRAPEVILNLGWD-VSSDMWS 244
Query: 238 CGVILYVILTGYLPF 252
G +L + TG L F
Sbjct: 245 FGCVLAELYTGSLLF 259
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 82 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 141 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 165
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 211
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 76 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 135 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 159
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 160 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 205
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 88/233 (37%), Gaps = 49/233 (21%)
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGG----ELFDKIASKGRLQEAEGRKLFQQL 123
L +HP++V L ++++ ++ +Y+ G L+ + + ++
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
G+ Y H + + HRD+K I NILLD
Sbjct: 149 ARGLHYLHTRAIIHRDVKSI-----------------------------------NILLD 173
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
KI+DFG+S L G+ Y+ PE +G SD++S GV+L+
Sbjct: 174 ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLF 232
Query: 244 VILTGYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQN-LLRKILEPNPVKRI 295
+L + + Q + R L +W N L +I++PN +I
Sbjct: 233 EVLCAR--------SAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 66/269 (24%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK---- 62
K E + RY L R LG G+F V A+D+ + A+KI+ +++ D+IK
Sbjct: 12 KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 71
Query: 63 -------REIAT-----LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGE----LFDKIA 106
+E + LKLL H N H+ + +++V+ + GE L K
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFN----HK---GPNGVHVVMVFEVLGENLLALIKKYE 124
Query: 107 SKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDLKVILKSCHMRIATLQVFLLTFLLMI 165
+G + +++ +QL+ G+ Y H + G+ H D+K L+ I
Sbjct: 125 HRG-IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP----------------ENVLMEI 167
Query: 166 VIRPWKFNVLQLENILLDSKGNIKISDFGLSAL-PQHFRDDGLLHTTCGSPNYVAPEVLA 224
V P EN++ IKI+D G + +H+ + + + Y +PEVL
Sbjct: 168 VDSP--------ENLI-----QIKIADLGNACWYDEHYTN------SIQTREYRSPEVLL 208
Query: 225 NRGYDGATSDIWSCGVILYVILTGYLPFD 253
+ G +DIWS +++ ++TG F+
Sbjct: 209 GAPW-GCGADIWSTACLIFELITGDFLFE 236
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 61/248 (24%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+KIL N K + E + + HP+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPH 101
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF----QQLIDGVSYCH 131
+VRL V S + I +V + + G L + + ++ G +L Q+ G+ Y
Sbjct: 102 LVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEH---KDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ + HRDL N+L+ S ++KI+
Sbjct: 158 ERRLVHRDLAA-----------------------------------RNVLVKSPNHVKIT 182
Query: 192 DFGLSAL-----PQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
DFGL+ L ++ D G + ++A E + R + SD+WS GV ++ ++
Sbjct: 183 DFGLARLLEGDEKEYNADGGKMPI-----KWMALECIHYRKFT-HQSDVWSYGVTIWELM 236
Query: 247 T-GYLPFD 253
T G P+D
Sbjct: 237 TFGGKPYD 244
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 72 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 131 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 155
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 156 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 201
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 66/269 (24%)
Query: 7 KQEGMRLGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIK---- 62
K E + RY L R LG G+F V A+D+ + A+KI+ +++ D+IK
Sbjct: 12 KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 71
Query: 63 -------REIAT-----LKLLKHPNVVRLHEVLASKSKIYMVLEYVTGGE----LFDKIA 106
+E + LKLL H N + +++V+ + GE L K
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFN-------HKGPNGVHVVMVFEVLGENLLALIKKYE 124
Query: 107 SKGRLQEAEGRKLFQQLIDGVSYCHNK-GVFHRDLKVILKSCHMRIATLQVFLLTFLLMI 165
+G + +++ +QL+ G+ Y H + G+ H D+K L+ I
Sbjct: 125 HRG-IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP----------------ENVLMEI 167
Query: 166 VIRPWKFNVLQLENILLDSKGNIKISDFGLSAL-PQHFRDDGLLHTTCGSPNYVAPEVLA 224
V P EN++ IKI+D G + +H+ + + + Y +PEVL
Sbjct: 168 VDSP--------ENLI-----QIKIADLGNACWYDEHYTN------SIQTREYRSPEVLL 208
Query: 225 NRGYDGATSDIWSCGVILYVILTGYLPFD 253
+ G +DIWS +++ ++TG F+
Sbjct: 209 GAPW-GCGADIWSTACLIFELITGDFLFE 236
>pdb|2ZFD|B Chain B, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 123
Score = 48.9 bits (115), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 348 INAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSAKDLLERIEDIVTEMGFRVQKKNG 407
+NAF +I S +LSG F +R RF S +A+ ++ER+E+IV+ V KK
Sbjct: 6 MNAFDIISGSPGFNLSGLFGDARKYDRVERFVSAWTAERVVERLEEIVSAENLTVAKKE- 64
Query: 408 KLKATQEHKPQKSLGSLSVAAEVFEISPSLYVVELRK 444
T K + G+ ++ E+ +++ L ++E+RK
Sbjct: 65 ----TWGMKIEGQKGNFAMVVEINQLTDELVMIEVRK 97
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 70 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 129 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 153
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILY 243
+ + T P + APE + + + SD+WS GV+++
Sbjct: 154 ALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 199
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 61/248 (24%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+KIL N K + E + + HP+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLF----QQLIDGVSYCH 131
+VRL V S + I +V + + G L + + ++ G +L Q+ G+ Y
Sbjct: 79 LVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEH---KDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKIS 191
+ + HRDL N+L+ S ++KI+
Sbjct: 135 ERRLVHRDLAA-----------------------------------RNVLVKSPNHVKIT 159
Query: 192 DFGLSAL-----PQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVIL 246
DFGL+ L ++ D G + ++A E + R + SD+WS GV ++ ++
Sbjct: 160 DFGLARLLEGDEKEYNADGGKMPI-----KWMALECIHYRKFT-HQSDVWSYGVTIWELM 213
Query: 247 T-GYLPFD 253
T G P+D
Sbjct: 214 TFGGKPYD 221
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 42/237 (17%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 434 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 492
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 493 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 517
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPF 252
+ + T P + APE + + + SD+WS GV+++ + G P+
Sbjct: 518 ALRADENYYKAQTHGKWPVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 122/319 (38%), Gaps = 76/319 (23%)
Query: 17 ELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+ G+TLG G FGKV A D+ L AVK+L+ H + + E+ + L
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHL 91
Query: 72 -KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGR---------------LQEAE 115
+H N+V L + ++ EY G+L + + K L + +
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 116 GRKL--------FQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVI 167
GR L Q+ G+++ +K HRD+
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAA------------------------- 186
Query: 168 RPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLA 224
N+LL + KI DFGL+ + +D ++ P ++APE +
Sbjct: 187 ----------RNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNARLPVKWMAPESIF 233
Query: 225 NRGYDGATSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQN 281
+ Y SD+WS G++L+ I + G P+ + + K+ + +++ P + +
Sbjct: 234 DCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS 292
Query: 282 LLRKILEPNPVKRITIAGI 300
+++ P R T I
Sbjct: 293 IMQACWALEPTHRPTFQQI 311
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 42/237 (17%)
Query: 20 RTLGEGNFGKVK--FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG GNFG VK + Q AVKIL KN + D++ E ++ L +P +V
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFH 137
R+ + ++S + +V+E G L + +++ +L Q+ G+ Y H
Sbjct: 435 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 493
Query: 138 RDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSA 197
RDL N+LL ++ KISDFGLS
Sbjct: 494 RDLAA-----------------------------------RNVLLVTQHYAKISDFGLSK 518
Query: 198 LPQHFRDDGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPF 252
+ + T P + APE + + + SD+WS GV+++ + G P+
Sbjct: 519 ALRADENYYKAQTHGKWPVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 18 LGRTLGEGNFGKVK---FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
L R LGEG FG+V + + AVK +K+ + K ++ E +K L HP
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 69
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
++V+L ++ + ++++E GEL + + L+ Q+ ++Y +
Sbjct: 70 HIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRD+ V NIL+ S +K+ DF
Sbjct: 129 NCVHRDIAV-----------------------------------RNILVASPECVKLGDF 153
Query: 194 GLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYL 250
GLS ++ D+ + +++PE + R + A SD+W V ++ IL+ G
Sbjct: 154 GLS---RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA-SDVWMFAVCMWEILSFGKQ 209
Query: 251 PF---DDRNLAVLYQKIFRGDFKLPK--WLSPGAQNLLRKILEPNPVKR 294
PF +++++ + +K GD +LPK P L+ + + +P R
Sbjct: 210 PFFWLENKDVIGVLEK---GD-RLPKPDLCPPVLYTLMTRCWDYDPSDR 254
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 18 LGRTLGEGNFGKVK---FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
L R LGEG FG+V + + AVK +K+ + K ++ E +K L HP
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 85
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
++V+L ++ + ++++E GEL + + L+ Q+ ++Y +
Sbjct: 86 HIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRD+ V NIL+ S +K+ DF
Sbjct: 145 NCVHRDIAV-----------------------------------RNILVASPECVKLGDF 169
Query: 194 GLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYL 250
GLS ++ D+ + +++PE + R + A SD+W V ++ IL+ G
Sbjct: 170 GLS---RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA-SDVWMFAVCMWEILSFGKQ 225
Query: 251 PF---DDRNLAVLYQKIFRGDFKLPK--WLSPGAQNLLRKILEPNPVKR 294
PF +++++ + +K GD +LPK P L+ + + +P R
Sbjct: 226 PFFWLENKDVIGVLEK---GD-RLPKPDLCPPVLYTLMTRCWDYDPSDR 270
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 60/291 (20%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLD-SGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
G+YE+ + G G + A D + +G P +K L + + +R+ L +
Sbjct: 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQF--LAEVV 137
Query: 73 HPNVVRLHEVLASKSKI-----YMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGV 127
HP++V++ + + Y+V+EYV G L K + +L AE +++ +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL--KRSKGQKLPVAEAIAYLLEILPAL 195
Query: 128 SYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN 187
SY H+ G+ + DLK ENI+L ++
Sbjct: 196 SYLHSIGLVYNDLKP-----------------------------------ENIML-TEEQ 219
Query: 188 IKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILT 247
+K+ D G + F G L+ G+P + APE++ R +DI++ G L LT
Sbjct: 220 LKLIDLGAVSRINSF---GYLY---GTPGFQAPEIV--RTGPTVATDIYTVGRTL-AALT 270
Query: 248 GYLPFDDRNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITIA 298
LP RN + D L + S G LLR+ ++P+P +R T A
Sbjct: 271 LDLP--TRN-GRYVDGLPEDDPVLKTYDSYG--RLLRRAIDPDPRQRFTTA 316
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 18 LGRTLGEGNFGKVK---FAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
L R LGEG FG+V + + AVK +K+ + K ++ E +K L HP
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 73
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ-QLIDGVSYCHNK 133
++V+L ++ + ++++E GEL + + L+ Q+ ++Y +
Sbjct: 74 HIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
HRD+ V NIL+ S +K+ DF
Sbjct: 133 NCVHRDIAV-----------------------------------RNILVASPECVKLGDF 157
Query: 194 GLSALPQHFRDDGLLHTTCG--SPNYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYL 250
GLS ++ D+ + +++PE + R + A SD+W V ++ IL+ G
Sbjct: 158 GLS---RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA-SDVWMFAVCMWEILSFGKQ 213
Query: 251 PF---DDRNLAVLYQKIFRGDFKLPK--WLSPGAQNLLRKILEPNPVKR 294
PF +++++ + +K GD +LPK P L+ + + +P R
Sbjct: 214 PFFWLENKDVIGVLEK---GD-RLPKPDLCPPVLYTLMTRCWDYDPSDR 258
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 48/252 (19%)
Query: 14 GRYELGRTLGEG--NFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
G YEL +G+G + V A+ +G V+ + + +T ++ E+ KL
Sbjct: 9 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVT-FLQGELHVSKLF 67
Query: 72 KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSY 129
HPN+V + +++++V ++ G D I + + E + Q ++ + Y
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ G HR +K+ H+ I+ L+ L N+ + S G +
Sbjct: 128 IHHMGYVHRS----VKASHILISVDGKVYLSGL--------------RSNLSMISHGQRQ 169
Query: 190 --ISDF---GLSALPQHFRDDGLLHTTCGSPNYVAPEVLAN--RGYDGATSDIWSCGVIL 242
+ DF + LP +++PEVL +GYD A SDI+S G+
Sbjct: 170 RVVHDFPKYSVKVLP-----------------WLSPEVLQQNLQGYD-AKSDIYSVGITA 211
Query: 243 YVILTGYLPFDD 254
+ G++PF D
Sbjct: 212 CELANGHVPFKD 223
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 48/252 (19%)
Query: 14 GRYELGRTLGEG--NFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
G YEL +G+G + V A+ +G V+ + + +T ++ E+ KL
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVT-FLQGELHVSKLF 83
Query: 72 KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASK--GRLQEAEGRKLFQQLIDGVSY 129
HPN+V + +++++V ++ G D I + + E + Q ++ + Y
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 130 CHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIK 189
H+ G HR +K+ H+ I+ L+ L N+ + S G +
Sbjct: 144 IHHMGYVHRS----VKASHILISVDGKVYLSGL--------------RSNLSMISHGQRQ 185
Query: 190 --ISDF---GLSALPQHFRDDGLLHTTCGSPNYVAPEVLAN--RGYDGATSDIWSCGVIL 242
+ DF + LP +++PEVL +GYD A SDI+S G+
Sbjct: 186 RVVHDFPKYSVKVLP-----------------WLSPEVLQQNLQGYD-AKSDIYSVGITA 227
Query: 243 YVILTGYLPFDD 254
+ G++PF D
Sbjct: 228 CELANGHVPFKD 239
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 89/277 (32%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAV-KILEKNRIIHLKITDQIKREIATLKLLKH 73
+Y LG+TLG G+FG V D++SG FA+ K+L+ R + RE+ +K+L H
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN--------RELDIMKVLDH 59
Query: 74 PNVVRL--------------------HEVLASKSK------------------IYMVLEY 95
N+++L H L K+ + +++EY
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 96 V--TGGELFDKIASKGRLQEAEGRKLF-QQLIDGVSYCHNKGVFHRDLKVILKSCHMRIA 152
V T ++ GR ++ QL V + H+ G+ HRD+K
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP---------- 169
Query: 153 TLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGN-IKISDFGLSALPQHFRDDGLLHTT 211
+N+L++SK N +K+ DFG + + + +
Sbjct: 170 -------------------------QNLLVNSKDNTLKLCDFGSAK--KLIPSEPSVAXI 202
Query: 212 CGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTG 248
C S Y APE++ + D+WS G + ++ G
Sbjct: 203 C-SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 56/244 (22%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIA----TLKLLKHPNVV 77
LG G +G V+ + + SG AVK RI + + KR + +++ + P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVK-----RIRATVNSQEQKRLLMDLDISMRTVDCPFTV 113
Query: 78 RLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNK- 133
+ L + +++ +E + + + ++ KG+ + E K+ ++ + + H+K
Sbjct: 114 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
V HRD+K N+L+++ G +K+ DF
Sbjct: 174 SVIHRDVKP-----------------------------------SNVLINALGQVKMCDF 198
Query: 194 GLSALPQHFRDDGLLHTTCGSPNYVAPE----VLANRGYDGATSDIWSCGVILYVILTGY 249
G+S + D G Y+APE L +GY SDIWS G+ + +
Sbjct: 199 GISG---YLVDSVAKTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILR 254
Query: 250 LPFD 253
P+D
Sbjct: 255 FPYD 258
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 120/312 (38%), Gaps = 69/312 (22%)
Query: 17 ELGRTLGEGNFGKVKFAQDL-----DSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
+ G+TLG G FGKV A D+ L AVK+L+ H + + E+ + L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHL 106
Query: 72 -KHPNVVRLHEVLASKSKIYMVLEYVTGGELFDKI-------------ASKGRLQEAEGR 117
+H N+V L + ++ EY G+L + + S ++ R
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 118 KLFQ---QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNV 174
L Q+ G+++ +K HRD+
Sbjct: 167 DLLHFSSQVAQGMAFLASKNCIHRDVAA-------------------------------- 194
Query: 175 LQLENILLDSKGNIKISDFGLSALPQHFRDDG--LLHTTCGSP-NYVAPEVLANRGYDGA 231
N+LL + KI DFGL+ + +D ++ P ++APE + + Y
Sbjct: 195 ---RNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT-V 247
Query: 232 TSDIWSCGVILYVILT-GYLPFDDRNLAVLYQKIFRGDFKL--PKWLSPGAQNLLRKILE 288
SD+WS G++L+ I + G P+ + + K+ + +++ P + ++++
Sbjct: 248 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 307
Query: 289 PNPVKRITIAGI 300
P R T I
Sbjct: 308 LEPTHRPTFQQI 319
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 65/305 (21%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFT 78
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQ 122
+VVRL V++ +V+E + G+L + S + + GR ++ +
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ DG++Y + K HRDL N ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAA-----------------------------------RNCMV 163
Query: 183 DSKGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
+KI DFG++ ++R GLL ++APE L + G +SD+WS
Sbjct: 164 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMAPESLKD-GVFTTSSDMWS 217
Query: 238 CGVILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
GV+L+ I + P+ N VL + G P +L+R + NP R
Sbjct: 218 FGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 296 TIAGI 300
T I
Sbjct: 278 TFLEI 282
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 79
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 139 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 163
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 164 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 220
Query: 252 FD 253
+D
Sbjct: 221 YD 222
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 65/303 (21%)
Query: 20 RTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 79
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQLI 124
+VVRL V++ +V+E + G+L + S + + GR ++ ++
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
DG++Y + K HRDL N ++
Sbjct: 140 DGMAYLNAKKFVHRDLAA-----------------------------------RNCMVAH 164
Query: 185 KGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
+KI DFG++ ++R GLL ++APE L + G +SD+WS G
Sbjct: 165 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMAPESLKD-GVFTTSSDMWSFG 218
Query: 240 VILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITI 297
V+L+ I + P+ N VL + G P +L+R + NP R T
Sbjct: 219 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 278
Query: 298 AGI 300
I
Sbjct: 279 LEI 281
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 65/305 (21%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFT 78
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQ 122
+VVRL V++ +V+E + G+L + S + + GR ++ +
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ DG++Y + K HRDL N ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAA-----------------------------------RNCMV 163
Query: 183 DSKGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
+KI DFG++ ++R GLL ++APE L + G +SD+WS
Sbjct: 164 AHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV-----RWMAPESLKD-GVFTTSSDMWS 217
Query: 238 CGVILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
GV+L+ I + P+ N VL + G P +L+R + NP R
Sbjct: 218 FGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 296 TIAGI 300
T I
Sbjct: 278 TFLEI 282
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 82 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 141 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 165
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 166 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 222
Query: 252 FD 253
+D
Sbjct: 223 YD 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 45/240 (18%)
Query: 20 RTLGEGNFGKVKFAQDLDSG--LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPNVV 77
+ LG G FG V + G + V I+E K +I E + + +P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 78 RLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKGVF 136
RL + + S + ++ + + G L D + K + Q+ G++Y ++ +
Sbjct: 115 RLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 173
Query: 137 HRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLS 196
HRDL N+L+ + ++KI+DFGL+
Sbjct: 174 HRDLAA-----------------------------------RNVLVKTPQHVKITDFGLA 198
Query: 197 ALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLPFD 253
L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P+D
Sbjct: 199 KLLGA--EEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 82
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 142 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 166
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 167 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 223
Query: 252 FD 253
+D
Sbjct: 224 YD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 79
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 139 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 163
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 164 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 220
Query: 252 FD 253
+D
Sbjct: 221 YD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 140 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 164
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 165 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 221
Query: 252 FD 253
+D
Sbjct: 222 YD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 79 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 138 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 163 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 219
Query: 252 FD 253
+D
Sbjct: 220 YD 221
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 120/309 (38%), Gaps = 77/309 (24%)
Query: 20 RTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 77
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQLI 124
+VVRL V++ +V+E + G+L + S + + GR ++ ++
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
DG++Y + K HRDL N ++
Sbjct: 138 DGMAYLNAKKFVHRDLAA-----------------------------------RNCMVAH 162
Query: 185 KGNIKISDFGLSALPQHFRD-----------DGLLHTTCGSPNYVAPEVLANRGYDGATS 233
+KI DFG++ RD GLL ++APE L + G +S
Sbjct: 163 DFTVKIGDFGMT------RDIXETDXXRKGGKGLLPV-----RWMAPESLKD-GVFTTSS 210
Query: 234 DIWSCGVILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNP 291
D+WS GV+L+ I + P+ N VL + G P +L+R + NP
Sbjct: 211 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNP 270
Query: 292 VKRITIAGI 300
R T I
Sbjct: 271 KMRPTFLEI 279
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 121/311 (38%), Gaps = 77/311 (24%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFT 78
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQ 122
+VVRL V++ +V+E + G+L + S + + GR ++ +
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ DG++Y + K HRDL N ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAA-----------------------------------RNCMV 163
Query: 183 DSKGNIKISDFGLSALPQHFRD-----------DGLLHTTCGSPNYVAPEVLANRGYDGA 231
+KI DFG++ RD GLL ++APE L + G
Sbjct: 164 AHDFTVKIGDFGMT------RDIXETDXXRKGGKGLLPV-----RWMAPESLKD-GVFTT 211
Query: 232 TSDIWSCGVILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEP 289
+SD+WS GV+L+ I + P+ N VL + G P +L+R +
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 290 NPVKRITIAGI 300
NP R T I
Sbjct: 272 NPKMRPTFLEI 282
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 138 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 163 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 219
Query: 252 FD 253
+D
Sbjct: 220 YD 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 75
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ +G++Y ++
Sbjct: 76 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 135 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 159
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 160 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 216
Query: 252 FD 253
+D
Sbjct: 217 YD 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 121/311 (38%), Gaps = 77/311 (24%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFT 78
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQ 122
+VVRL V++ +V+E + G+L + S + + GR ++ +
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ DG++Y + K HRDL N ++
Sbjct: 139 IADGMAYLNAKKFVHRDLAA-----------------------------------RNCMV 163
Query: 183 DSKGNIKISDFGLSALPQHFRD-----------DGLLHTTCGSPNYVAPEVLANRGYDGA 231
+KI DFG++ RD GLL ++APE L + G
Sbjct: 164 AHDFTVKIGDFGMT------RDIXETDXXRKGGKGLLPV-----RWMAPESLKD-GVFTT 211
Query: 232 TSDIWSCGVILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEP 289
+SD+WS GV+L+ I + P+ N VL + G P +L+R +
Sbjct: 212 SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQF 271
Query: 290 NPVKRITIAGI 300
NP R T I
Sbjct: 272 NPNMRPTFLEI 282
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 88
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 89 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 148 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 172
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 173 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 229
Query: 252 FD 253
+D
Sbjct: 230 YD 231
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 138 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 163 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 219
Query: 252 FD 253
+D
Sbjct: 220 YD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 141 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 165
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 166 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 222
Query: 252 FD 253
+D
Sbjct: 223 YD 224
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 65/305 (21%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLK 72
L R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFT 78
Query: 73 HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQ 122
+VVRL V++ +V+E + G+L + S + + GR ++ +
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 123 LIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
+ DG++Y + K HR+L N ++
Sbjct: 139 IADGMAYLNAKKFVHRNLAA-----------------------------------RNCMV 163
Query: 183 DSKGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
+KI DFG++ ++R GLL ++APE L + G +SD+WS
Sbjct: 164 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMAPESLKD-GVFTTSSDMWS 217
Query: 238 CGVILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRI 295
GV+L+ I + P+ N VL + G P +L+R + NP R
Sbjct: 218 FGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRP 277
Query: 296 TIAGI 300
T I
Sbjct: 278 TFLEI 282
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 141 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 165
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 166 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 222
Query: 252 FD 253
+D
Sbjct: 223 YD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 103
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 104 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 163 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 187
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 188 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 244
Query: 252 FD 253
+D
Sbjct: 245 YD 246
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 84
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 85 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 144 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 168
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 169 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 225
Query: 252 FD 253
+D
Sbjct: 226 YD 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 141 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 165
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 166 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 222
Query: 252 FD 253
+D
Sbjct: 223 YD 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 138 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 163 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 219
Query: 252 FD 253
+D
Sbjct: 220 YD 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 121/303 (39%), Gaps = 65/303 (21%)
Query: 20 RTLGEGNFGKV--KFAQDLDSG---LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHP 74
R LG+G+FG V A+D+ G AVK + ++ + +I + E + +K
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 81
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGR---------KLFQQLI 124
+VVRL V++ +V+E + G+L + S + + GR ++ ++
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
DG++Y + K HR+L N ++
Sbjct: 142 DGMAYLNAKKFVHRNLAA-----------------------------------RNCMVAH 166
Query: 185 KGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
+KI DFG++ ++R GLL ++APE L + G +SD+WS G
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMAPESLKD-GVFTTSSDMWSFG 220
Query: 240 VILYVILT-GYLPFDD-RNLAVLYQKIFRGDFKLPKWLSPGAQNLLRKILEPNPVKRITI 297
V+L+ I + P+ N VL + G P +L+R + NP R T
Sbjct: 221 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTF 280
Query: 298 AGI 300
I
Sbjct: 281 LEI 283
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 140 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 164
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 165 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 221
Query: 252 FD 253
+D
Sbjct: 222 YD 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 72
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKI-ASKGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 73 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 132 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 156
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 157 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 213
Query: 252 FD 253
+D
Sbjct: 214 YD 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 85
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 145 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 169
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 170 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 226
Query: 252 FD 253
+D
Sbjct: 227 YD 228
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 53/243 (21%)
Query: 49 KNRIIHLKITDQI-----------KREIATLKLLKHPNVVRLHEVLASKSKIYMVLEYVT 97
+ RI+ LK+ + +RE T L+ P+VV +H+ ++Y+ +
Sbjct: 58 RERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLIN 117
Query: 98 GGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVF 157
G +L + +G L + +Q+ + H G HRD+K
Sbjct: 118 GVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP--------------- 162
Query: 158 LLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFGLSALPQHFRDDGL--LHTTCGSP 215
ENIL+ + + DFG+++ D+ L L T G+
Sbjct: 163 --------------------ENILVSADDFAYLVDFGIASATT---DEKLTQLGNTVGTL 199
Query: 216 NYVAPEVLANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFRGDFKLPKWL 275
Y APE + + +DI++ +LY LTG P+ L+V I + P +
Sbjct: 200 YYXAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQA-IPRPSTV 257
Query: 276 SPG 278
PG
Sbjct: 258 RPG 260
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 94/244 (38%), Gaps = 56/244 (22%)
Query: 22 LGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATL----KLLKHPNVV 77
LG G +G V+ + + SG AVK RI + + KR + L + + P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVK-----RIRATVNSQEQKRLLXDLDISXRTVDCPFTV 96
Query: 78 RLHEVLASKSKIYMVLEYVTGG--ELFDKIASKGR-LQEAEGRKLFQQLIDGVSYCHNK- 133
+ L + +++ E + + ++ KG+ + E K+ ++ + + H+K
Sbjct: 97 TFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 134 GVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDF 193
V HRD+K N+L+++ G +K DF
Sbjct: 157 SVIHRDVKP-----------------------------------SNVLINALGQVKXCDF 181
Query: 194 GLSALPQHFRDDGLLHTTCGSPNYVAPE----VLANRGYDGATSDIWSCGVILYVILTGY 249
G+S + DD G Y APE L +GY SDIWS G+ +
Sbjct: 182 GISG---YLVDDVAKDIDAGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILR 237
Query: 250 LPFD 253
P+D
Sbjct: 238 FPYD 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 102/256 (39%), Gaps = 54/256 (21%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKIT------DQIKREIATL 68
R LG+ LG G FG+V A F + R + +K+ + + ++ L
Sbjct: 28 RLNLGKPLGRGAFGQVIEAD------AFGIDKTATXRTVAVKMLKEGATHSEHRALMSEL 81
Query: 69 KLL----KHPNVVRLHEVLASKSKIYMVL-EYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
K+L H NVV L MV+ E+ G L + SK
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--------------- 126
Query: 124 IDGVSYCHNKGVFHRDL-KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
N+ V ++DL K L H+ + QV + + R L NILL
Sbjct: 127 -------RNEFVPYKDLYKDFLTLEHLICYSFQV--AKGMEFLASRKXIHRDLAARNILL 177
Query: 183 DSKGNIKISDFGLS----ALPQHFRD-DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWS 237
K +KI DFGL+ P + R D L ++APE + +R Y SD+WS
Sbjct: 178 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-----KWMAPETIFDRVYT-IQSDVWS 231
Query: 238 CGVILYVILT-GYLPF 252
GV+L+ I + G P+
Sbjct: 232 FGVLLWEIFSLGASPY 247
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 82
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 142 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 166
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 167 RAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 223
Query: 252 FD 253
+D
Sbjct: 224 YD 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 59/248 (23%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSGLPFA-VKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ R LG+G+FG V A+ + P V I N ++ + E + +K
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFD-------KIASKGRLQEAEGRKLFQ---QLI 124
+VVRL V++ +++E +T G+L +A+ L K+ Q ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
DG++Y + HRDL N ++
Sbjct: 149 DGMAYLNANKFVHRDLAA-----------------------------------RNCMVAE 173
Query: 185 KGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
+KI DFG++ ++R GLL +++PE L + G SD+WS G
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMSPESLKD-GVFTTYSDVWSFG 227
Query: 240 VILYVILT 247
V+L+ I T
Sbjct: 228 VVLWEIAT 235
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 43/264 (16%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDS---GLPFAVKILEKNRIIHLKITDQIKREIATLKLL 71
RYE+ TLGEG FG+V Q +D G A+KI++ K + + EI L+ +
Sbjct: 34 RYEIVSTLGEGTFGRV--VQCVDHRRGGARVALKIIKNVE----KYKEAARLEINVLEKI 87
Query: 72 --KHPN----VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQE--AEGRKLFQQL 123
K P+ V++ + + + E + G FD + L + R + QL
Sbjct: 88 NEKDPDNKNLCVQMFDWFDYHGHMCISFE-LLGLSTFDFLKDNNYLPYPIHQVRHMAFQL 146
Query: 124 IDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLD 183
V + H+ + H DLK L + +N+ + +
Sbjct: 147 CQAVKFLHDNKLTHTDLKP----------------ENILFVNSDYELTYNLEKKRDERSV 190
Query: 184 SKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+++ DFG + D T + +Y APEV+ G+ D+WS G I++
Sbjct: 191 KSTAVRVVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGW-SQPCDVWSIGCIIF 244
Query: 244 VILTGYLPF---DDRNLAVLYQKI 264
G+ F D+R + ++I
Sbjct: 245 EYYVGFTLFQTHDNREHLAMMERI 268
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ L G FG V + G +P A+K E K +I E + + +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 85
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 86 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 145 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 169
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 170 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 226
Query: 252 FD 253
+D
Sbjct: 227 YD 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 140 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 164
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 165 RAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 221
Query: 252 FD 253
+D
Sbjct: 222 YD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++++ + G L D + K + Q+ G++Y ++
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 140 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 164
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 165 RAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 221
Query: 252 FD 253
+D
Sbjct: 222 YD 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 103/253 (40%), Gaps = 48/253 (18%)
Query: 15 RYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKIT------DQIKREIATL 68
R LG+ LG G FG+V A F + R + +K+ + + ++ L
Sbjct: 28 RLNLGKPLGRGAFGQVIEAD------AFGIDKTATXRTVAVKMLKEGATHSEHRALMSEL 81
Query: 69 KLL----KHPNVVRLHEVLASKSKIYMVL-EYVTGGELFDKIASKGRLQEAEGRKLFQQL 123
K+L H NVV L MV+ E+ G L + SK
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--------------- 126
Query: 124 IDGVSYCHNKGVFHRDL-KVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL 182
N+ V ++DL K L H+ + QV + + R L NILL
Sbjct: 127 -------RNEFVPYKDLYKDFLTLEHLIXYSFQV--AKGMEFLASRKXIHRDLAARNILL 177
Query: 183 DSKGNIKISDFGLSALPQHFRD-DGLLHTTCGSP-NYVAPEVLANRGYDGATSDIWSCGV 240
K +KI DFGL+ ++D D + P ++APE + +R Y SD+WS GV
Sbjct: 178 SEKNVVKIXDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGV 234
Query: 241 ILYVILT-GYLPF 252
+L+ I + G P+
Sbjct: 235 LLWEIFSLGASPY 247
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 183 DSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGA--TSDIWSCGV 240
D I ++D S F+ G ++ +P +VAPE L + D ++D+WS V
Sbjct: 149 DMTARISMADVKFS-----FQSPGRMY----APAWVAPEALQKKPEDTNRRSADMWSFAV 199
Query: 241 ILYVILTGYLPFDD-RNLAVLYQKIFRG-DFKLPKWLSPGAQNLLRKILEPNPVKR 294
+L+ ++T +PF D N+ + + G +P +SP L++ + +P KR
Sbjct: 200 LLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKR 255
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 114/308 (37%), Gaps = 61/308 (19%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK----ILEKNRIIHLK----ITDQIKREIAT 67
Y + R + G++G V D G+P A+K + R +++ + ++ REI
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 68 LKLLKHPNVVRLHEVLA-----SKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ- 121
L HPN++ L ++ + K+Y+V E + +L I + + + + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
++ G+ H GV HRD L NIL
Sbjct: 142 HILLGLHVLHEAGVVHRD-----------------------------------LHPGNIL 166
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPE-VLANRGYDGATSDIWSCGV 240
L +I I DF L+ + D H Y APE V+ +G+ D+WS G
Sbjct: 167 LADNNDITICDFNLAR--EDTADANKTHYVTHRW-YRAPELVMQFKGFTKLV-DMWSAGC 222
Query: 241 ILYVILTGYLPFDDRNLAVLYQKIFR--GDFKLPK---WLSPGAQNLLRKILEPNPVKRI 295
++ + F KI G K+ + SP A++ LR L P +
Sbjct: 223 VMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW 282
Query: 296 TIAGIKAD 303
T AD
Sbjct: 283 TAVVPTAD 290
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 114/308 (37%), Gaps = 61/308 (19%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVK----ILEKNRIIHLK----ITDQIKREIAT 67
Y + R + G++G V D G+P A+K + R +++ + ++ REI
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 68 LKLLKHPNVVRLHEVLA-----SKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQ- 121
L HPN++ L ++ + K+Y+V E + +L I + + + + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 122 QLIDGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENIL 181
++ G+ H GV HRD L NIL
Sbjct: 142 HILLGLHVLHEAGVVHRD-----------------------------------LHPGNIL 166
Query: 182 LDSKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPE-VLANRGYDGATSDIWSCGV 240
L +I I DF L+ + D H Y APE V+ +G+ D+WS G
Sbjct: 167 LADNNDITICDFNLAR--EDTADANKTHYVTHRW-YRAPELVMQFKGFTKLV-DMWSAGC 222
Query: 241 ILYVILTGYLPFDDRNLAVLYQKIFR--GDFKLPK---WLSPGAQNLLRKILEPNPVKRI 295
++ + F KI G K+ + SP A++ LR L P +
Sbjct: 223 VMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW 282
Query: 296 TIAGIKAD 303
T AD
Sbjct: 283 TAVVPTAD 290
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 108/253 (42%), Gaps = 52/253 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL- 71
+ RYE+ +G+G+FG+V A D A+KI+ KN+ L +Q + E+ L+L+
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFL---NQAQIEVRLLELMN 89
Query: 72 KHPN-----VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
KH +V L ++ + +V E ++ L D
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-----------------------YNLYDL 126
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL--DS 184
+ + +GV L + K ++ T +FL T L I+ L+ ENILL
Sbjct: 127 LRNTNFRGV---SLNLTRKFAQ-QMCTALLFLATPELSII-----HCDLKPENILLCNPK 177
Query: 185 KGNIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ IKI DFG S L Q ++ S Y +PEVL YD A D+WS G IL
Sbjct: 178 RSAIKIVDFGSSCQLGQR------IYQXIQSRFYRSPEVLLGMPYDLAI-DMWSLGCILV 230
Query: 244 VILTGYLPFDDRN 256
+ TG F N
Sbjct: 231 EMHTGEPLFSGAN 243
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 59/248 (23%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSGLPFA-VKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ R LG+G+FG V A+ + P V I N ++ + E + +K
Sbjct: 19 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFD-------KIASKGRLQEAEGRKLFQ---QLI 124
+VVRL V++ +++E +T G+L +A+ L K+ Q ++
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
DG++Y + HRDL N ++
Sbjct: 139 DGMAYLNANKFVHRDLAA-----------------------------------RNCMVAE 163
Query: 185 KGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
+KI DFG++ ++R GLL +++PE L + G SD+WS G
Sbjct: 164 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMSPESLKD-GVFTTYSDVWSFG 217
Query: 240 VILYVILT 247
V+L+ I T
Sbjct: 218 VVLWEIAT 225
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 108/253 (42%), Gaps = 52/253 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL- 71
+ RYE+ +G+G+FG+V A D A+KI+ KN+ L +Q + E+ L+L+
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFL---NQAQIEVRLLELMN 108
Query: 72 KHPN-----VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
KH +V L ++ + +V E ++ L D
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-----------------------YNLYDL 145
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILL--DS 184
+ + +GV L + K ++ T +FL T L I+ L+ ENILL
Sbjct: 146 LRNTNFRGV---SLNLTRKFAQ-QMCTALLFLATPELSII-----HCDLKPENILLCNPK 196
Query: 185 KGNIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ IKI DFG S L Q ++ S Y +PEVL YD A D+WS G IL
Sbjct: 197 RSAIKIVDFGSSCQLGQR------IYQXIQSRFYRSPEVLLGMPYDLAI-DMWSLGCILV 249
Query: 244 VILTGYLPFDDRN 256
+ TG F N
Sbjct: 250 EMHTGEPLFSGAN 262
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 91/242 (37%), Gaps = 22/242 (9%)
Query: 16 YELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLK--- 72
+++ +GEG F V A V EK + HL T R A L+ L
Sbjct: 23 FKIEDKIGEGTFSSVYLAT-----AQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAG 77
Query: 73 -HPNVVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDGVSYCH 131
NV+ + + + + Y+ D + S L E R+ L + H
Sbjct: 78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS---LSFQEVREYMLNLFKALKRIH 134
Query: 132 NKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQ-LENILLDSKGNIKI 190
G+ HRD+K + R+ + L+ F L K +L+ +++ + +
Sbjct: 135 QFGIVHRDVKPSNFLYNRRLK--KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 191 SDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILYVILTGYL 250
LS Q + G+P + APEVL D+WS GVI +L+G
Sbjct: 193 CSICLSRRQQ-------VAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245
Query: 251 PF 252
PF
Sbjct: 246 PF 247
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 42/252 (16%)
Query: 15 RYELGRTLGEGNFGKV----KFAQDLDSGL-PFAVKILEKNRII--HLKITDQIKREIAT 67
R +LG+ LG G FG+V F D + AVK+L++ H + ++K
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---IL 86
Query: 68 LKLLKHPNVVRLHEVLASKSKIYMVL-EYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
+ + H NVV L MV+ E+ G L + SK R F
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--------RNEF------ 132
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKG 186
V Y ++D + H+ + QV + + R L NILL K
Sbjct: 133 VPYKEAPEDLYKDFLTLE---HLICYSFQV--AKGMEFLASRKCIHRDLAARNILLSEKN 187
Query: 187 NIKISDFGLS----ALPQHFRD-DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVI 241
+KI DFGL+ P + R D L ++APE + +R Y SD+WS GV+
Sbjct: 188 VVKICDFGLARDIYKDPDYVRKGDARLPL-----KWMAPETIFDRVYT-IQSDVWSFGVL 241
Query: 242 LYVILT-GYLPF 252
L+ I + G P+
Sbjct: 242 LWEIFSLGASPY 253
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 52/253 (20%)
Query: 13 LGRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLL- 71
+ RYE+ +G+G+FG+V A D A+KI+ KN+ L +Q + E+ L+L+
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFL---NQAQIEVRLLELMN 108
Query: 72 KHPN-----VVRLHEVLASKSKIYMVLEYVTGGELFDKIASKGRLQEAEGRKLFQQLIDG 126
KH +V L ++ + +V E ++ L+D + + G
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTN--------------FRG 153
Query: 127 VSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS-- 184
VS + + ++ T +FL T L I+ L+ ENILL +
Sbjct: 154 VSLN------------LTRKFAQQMCTALLFLATPELSII-----HCDLKPENILLCNPK 196
Query: 185 KGNIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCGVILY 243
+ IKI DFG S L Q ++ S Y +PEVL YD A D+WS G IL
Sbjct: 197 RXAIKIVDFGSSCQLGQR------IYQXIQSRFYRSPEVLLGMPYDLAI-DMWSLGCILV 249
Query: 244 VILTGYLPFDDRN 256
+ TG F N
Sbjct: 250 EMHTGEPLFSGAN 262
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
GRY + R LG G+F V + D+ A+K+++ T+ EI LK +++
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE----HYTETALDEIRLLKSVRN 92
Query: 74 -----PNVVRLHEVL-------ASKSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKL 119
PN + ++L + + I MV E V G L I L +K+
Sbjct: 93 SDPNDPNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKI 151
Query: 120 FQQLIDGVSYCHNKG-VFHRDLK---VILKSCHMRIATLQVFLLTFLLMIVIRP------ 169
QQ++ G+ Y H K + H D+K ++L I L + P
Sbjct: 152 IQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 211
Query: 170 --------WKFNVLQLENILLDSKGNIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAP 220
+ N L+ +N K +KI+D G + + +HF +D + Y +
Sbjct: 212 TAPATAGNFLVNPLEPKNA---EKLKVKIADLGNACWVHKHFTED------IQTRQYRSL 262
Query: 221 EVLANRGYDGATSDIWSCGVILYVILTGYLPFD 253
EVL GY+ +DIWS + + + TG F+
Sbjct: 263 EVLIGSGYN-TPADIWSTACMAFELATGDYLFE 294
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ L G FG V + G +P A+K E K +I E + + +P+
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 138 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 163 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 219
Query: 252 FD 253
+D
Sbjct: 220 YD 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 138 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 162
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 163 RAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 219
Query: 252 FD 253
+D
Sbjct: 220 YD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ L G FG V + G +P A+K E K +I E + + +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 85
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 145 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 169
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
L+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 170 LAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 226
Query: 252 FD 253
+D
Sbjct: 227 YD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 140 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 164
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 165 RAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 221
Query: 252 FD 253
+D
Sbjct: 222 YD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 49/242 (20%)
Query: 20 RTLGEGNFGKVKFAQDLDSG----LPFAVKILEKNRIIHLKITDQIKREIATLKLLKHPN 75
+ LG G FG V + G +P A+K E K +I E + + +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAYVMASVDNPH 85
Query: 76 VVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-KGRLQEAEGRKLFQQLIDGVSYCHNKG 134
V RL + + S + ++ + + G L D + K + Q+ G++Y ++
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 135 VFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDSKGNIKISDFG 194
+ HRDL N+L+ + ++KI+DFG
Sbjct: 145 LVHRDLAA-----------------------------------RNVLVKTPQHVKITDFG 169
Query: 195 LSALPQHFRDDGLLHTTCGSP--NYVAPEVLANRGYDGATSDIWSCGVILYVILT-GYLP 251
+ L ++ H G ++A E + +R Y SD+WS GV ++ ++T G P
Sbjct: 170 RAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKP 226
Query: 252 FD 253
+D
Sbjct: 227 YD 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 59/248 (23%)
Query: 18 LGRTLGEGNFGKV--KFAQDLDSGLPFA-VKILEKNRIIHLKITDQIKREIATLKLLKHP 74
+ R LG+G+FG V A+ + P V I N ++ + E + +K
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 75 NVVRLHEVLASKSKIYMVLEYVTGGELFDKIAS-------KGRLQEAEGRKLFQ---QLI 124
+VVRL V++ +++E +T G+L + S L K+ Q ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 125 DGVSYCHNKGVFHRDLKVILKSCHMRIATLQVFLLTFLLMIVIRPWKFNVLQLENILLDS 184
DG++Y + HRDL N ++
Sbjct: 149 DGMAYLNANKFVHRDLAA-----------------------------------RNCMVAE 173
Query: 185 KGNIKISDFGLSA---LPQHFRD--DGLLHTTCGSPNYVAPEVLANRGYDGATSDIWSCG 239
+KI DFG++ ++R GLL +++PE L + G SD+WS G
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMSPESLKD-GVFTTYSDVWSFG 227
Query: 240 VILYVILT 247
V+L+ I T
Sbjct: 228 VVLWEIAT 235
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 14 GRYELGRTLGEGNFGKVKFAQDLDSGLPFAVKILEKNRIIHLKITDQIKREIATLKLLKH 73
GRY + R LG G+F V + D+ A+K+++ T+ EI LK +++
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE----HYTETALDEIRLLKSVRN 76
Query: 74 -----PNVVRLHEVL-------ASKSKIYMVLEYVTGGELFDKIASKGR--LQEAEGRKL 119
PN + ++L + + I MV E V G L I L +K+
Sbjct: 77 SDPNDPNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKI 135
Query: 120 FQQLIDGVSYCHNKG-VFHRDLK---VILKSCHMRIATLQVFLLTFLLMIVIRP------ 169
QQ++ G+ Y H K + H D+K ++L I L + P
Sbjct: 136 IQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 195
Query: 170 --------WKFNVLQLENILLDSKGNIKISDFGLSA-LPQHFRDDGLLHTTCGSPNYVAP 220
+ N L+ +N K +KI+D G + + +HF +D + Y +
Sbjct: 196 TAPATAGNFLVNPLEPKNA---EKLKVKIADLGNACWVHKHFTED------IQTRQYRSL 246
Query: 221 EVLANRGYDGATSDIWSCGVILYVILTGYLPFD 253
EVL GY+ +DIWS + + + TG F+
Sbjct: 247 EVLIGSGYN-TPADIWSTACMAFELATGDYLFE 278
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,448,854
Number of Sequences: 62578
Number of extensions: 630001
Number of successful extensions: 5394
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 1863
Number of HSP's gapped (non-prelim): 2105
length of query: 476
length of database: 14,973,337
effective HSP length: 102
effective length of query: 374
effective length of database: 8,590,381
effective search space: 3212802494
effective search space used: 3212802494
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)