BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011872
(475 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554300|ref|XP_002518190.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
gi|223542786|gb|EEF44323.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
Length = 458
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/461 (85%), Positives = 421/461 (91%), Gaps = 10/461 (2%)
Query: 15 LSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTY 74
LS+ T SS SSS + S +KSVKLREDWR+RS+PIPPGGTYPAKDHCSRCGLCDTY
Sbjct: 8 LSLPTFISSSYSSSKDTNSNSSNKSVKLREDWRQRSRPIPPGGTYPAKDHCSRCGLCDTY 67
Query: 75 YIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQ 134
YI+HV++ACAFLGDGMSRIEGLE VVHGRGR+ DS D+ YLGVHEELLYARKTKPVEGAQ
Sbjct: 68 YISHVRNACAFLGDGMSRIEGLEAVVHGRGRKIDSSDEMYLGVHEELLYARKTKPVEGAQ 127
Query: 135 WTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKG 194
WTGIVTTIAIEMLK MV+AV+CVQS DP+DRLSPRPVLARTP+EVLAAKG
Sbjct: 128 WTGIVTTIAIEMLKADMVDAVICVQS----------DPEDRLSPRPVLARTPQEVLAAKG 177
Query: 195 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 254
VKPTLSPNLNTLALVEA+GVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR
Sbjct: 178 VKPTLSPNLNTLALVEASGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 237
Query: 255 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 314
EGLDKFLKAAS EPETVLHYEFMQDYKVHLKHLDG IEEVPYFCLPA DLVDVIAPSCYS
Sbjct: 238 EGLDKFLKAASDEPETVLHYEFMQDYKVHLKHLDGRIEEVPYFCLPATDLVDVIAPSCYS 297
Query: 315 CFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 374
CFDYTNALADLVVGYMGVPKY G+SMTQHPQY+TVRN+RG+EML LV+ LLEITPTISSG
Sbjct: 298 CFDYTNALADLVVGYMGVPKYAGVSMTQHPQYVTVRNDRGREMLDLVRGLLEITPTISSG 357
Query: 375 DRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 434
DRRPFVMETVKADDNAK+G+GPSQ APKFVGN +AF +NL+GPKGLEFARYSLDYHTIRN
Sbjct: 358 DRRPFVMETVKADDNAKLGKGPSQSAPKFVGNFLAFILNLIGPKGLEFARYSLDYHTIRN 417
Query: 435 YLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 475
YL+ NRAWGK RA++H PSYAKKIVEMYNQNGQIDQML +K
Sbjct: 418 YLYTNRAWGKARAERHTPSYAKKIVEMYNQNGQIDQMLQNK 458
>gi|225433343|ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
gi|297741879|emb|CBI33314.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/438 (87%), Positives = 416/438 (94%), Gaps = 10/438 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
KSVKLR+DWR+RS+PIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 30 KSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLE 89
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
+VHGRGR+ SLD+TYLGV+E+LLYARKT+PVEGAQWTGIVTTIAIEMLK GMVEAV+C
Sbjct: 90 PLVHGRGRKAYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVIC 149
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVEAAGVKRL
Sbjct: 150 VQS----------DPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 199
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE HLNL+KLYVLGTNCVDNGTREGLDKFL AASSEPETVLHYEFM
Sbjct: 200 LFCGVGCQVQALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFM 259
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKVHLKHLDGHIEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY G
Sbjct: 260 QDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALADLVVGYMGVPKYPG 319
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
+SMTQHPQY+TVRNERG+EMLSLV+NLLEI PT SSGDRRPFVMETVKADDNAK+G+GPS
Sbjct: 320 VSMTQHPQYVTVRNERGREMLSLVENLLEIIPTTSSGDRRPFVMETVKADDNAKLGKGPS 379
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
QPAPKFVGNLIAF +NL+GPKGLEFARYSLDYHTIRNY++VNR WGK+RAD+HMPSYAKK
Sbjct: 380 QPAPKFVGNLIAFILNLIGPKGLEFARYSLDYHTIRNYIYVNRMWGKQRADRHMPSYAKK 439
Query: 458 IVEMYNQNGQIDQMLSSK 475
+V++YNQNG+ID+MLS+K
Sbjct: 440 LVDLYNQNGEIDKMLSNK 457
>gi|356534864|ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
Length = 452
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/438 (86%), Positives = 412/438 (94%), Gaps = 10/438 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K L++DWR +SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 25 KDTSLKQDWRTKSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIERLE 84
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ D+LD+TYLGV+EELLYARK PVEGAQWTGIVTTIAIEMLK+GMVEAV+C
Sbjct: 85 PVVHGRGRKTDNLDETYLGVYEELLYARKLNPVEGAQWTGIVTTIAIEMLKSGMVEAVIC 144
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DPDDR +PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL
Sbjct: 145 VQS----------DPDDRFAPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 194
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVEHHLNL+KLYVLGTNCVDNGTR+GLDKFLKAAS PETVLHYEFM
Sbjct: 195 LFCGVGCQVQALRSVEHHLNLDKLYVLGTNCVDNGTRQGLDKFLKAASQSPETVLHYEFM 254
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY+G
Sbjct: 255 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYSG 314
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
I MTQHPQY+TVRNERG+EMLSL++NLLEITPTIS+GDRRPFVMETVKADD AK+GRGPS
Sbjct: 315 IGMTQHPQYVTVRNERGREMLSLIENLLEITPTISTGDRRPFVMETVKADDEAKLGRGPS 374
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
QPAPKF+GNL+AF +NL+GPKGLEFARYSLDYHTIRNYLHVNR WGK+RAD+HMP+YAKK
Sbjct: 375 QPAPKFIGNLLAFILNLIGPKGLEFARYSLDYHTIRNYLHVNRMWGKERADRHMPTYAKK 434
Query: 458 IVEMYNQNGQIDQMLSSK 475
IV++YNQNGQI++MLS+K
Sbjct: 435 IVDLYNQNGQIEKMLSNK 452
>gi|297848696|ref|XP_002892229.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
gi|297338071|gb|EFH68488.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
Length = 461
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/468 (83%), Positives = 421/468 (89%), Gaps = 12/468 (2%)
Query: 8 AKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSR 67
+K S LP S + ++SSS S + + K VKLREDWR++SKPIPPGGTYPAKDHCSR
Sbjct: 6 SKLSLLPPCFSVV--NTSSSRSKDMNTEPKKKVKLREDWREKSKPIPPGGTYPAKDHCSR 63
Query: 68 CGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKT 127
CGLCDTYYIAHVK+ACAFLGDGMSRIE LE VVHGRGR+ DSL+DTY GVH+E LYARK
Sbjct: 64 CGLCDTYYIAHVKEACAFLGDGMSRIESLEPVVHGRGRKPDSLEDTYFGVHQEQLYARKL 123
Query: 128 KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPE 187
KPVEGAQWTGIVTTIAIEMLK+ MVEAVVCVQS DP+DRLSPRPVLARTPE
Sbjct: 124 KPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQS----------DPEDRLSPRPVLARTPE 173
Query: 188 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTN 247
EVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQALRSVE HLNLEKLYVLGTN
Sbjct: 174 EVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTN 233
Query: 248 CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDV 307
CVDNGTR+GLDKFLKAAS EPETVLHYEFMQDYKV LKHLDGHIEEVPYF LPANDLVDV
Sbjct: 234 CVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHLDGHIEEVPYFSLPANDLVDV 293
Query: 308 IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 367
IAPSCYSCFDYTNALADLV+GYMGVPKY+G++MT HPQYITVRNERGKEMLSLV+NLLEI
Sbjct: 294 IAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYITVRNERGKEMLSLVENLLEI 353
Query: 368 TPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSL 427
TPTISSGDRRPFV ETVKADDNAK GRGP+QPAP FVGN+IAF ++LVGPKGLEFARYSL
Sbjct: 354 TPTISSGDRRPFVTETVKADDNAKFGRGPAQPAPIFVGNIIAFILSLVGPKGLEFARYSL 413
Query: 428 DYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 475
DYHTIRNYLHVNR WGK+RA+ HMPSYAKKIVEMYN+NG ID+MLS K
Sbjct: 414 DYHTIRNYLHVNRKWGKQRANIHMPSYAKKIVEMYNKNGHIDKMLSRK 461
>gi|449487600|ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymethyl chlorophyll a
reductase, chloroplastic-like [Cucumis sativus]
Length = 459
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/469 (82%), Positives = 430/469 (91%), Gaps = 14/469 (2%)
Query: 6 ANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHC 65
A A SLPLS+ +C SSSSSSP+ K VKLR+DWR+RS+PIPPGGTYPAK+ C
Sbjct: 3 AIANLCSLPLSLPILC----SSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQC 58
Query: 66 SRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYAR 125
SRCGLCDTYYIAHVKDACAFLGDGMSRIE +E VVHGRGR+ D+LD+TY GVHE+LLYAR
Sbjct: 59 SRCGLCDTYYIAHVKDACAFLGDGMSRIEEMEPVVHGRGRKXDTLDETYFGVHEKLLYAR 118
Query: 126 KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLART 185
K KPVEGAQWTGIVTTIA+EMLK+GMVEAVVCVQS DP+DRLSPRP+LART
Sbjct: 119 KIKPVEGAQWTGIVTTIAVEMLKSGMVEAVVCVQS----------DPEDRLSPRPILART 168
Query: 186 PEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLG 245
PEEVLAA+GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE HLNLEKLYVLG
Sbjct: 169 PEEVLAARGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLG 228
Query: 246 TNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 305
TNCVDNGTREGLDKFLKAAS+EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV
Sbjct: 229 TNCVDNGTREGLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 288
Query: 306 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLL 365
DVIAPSCYSCFDYTNALADLVVGYMGVPKY+GISMTQHPQYITVRNERG+EML LV+ L
Sbjct: 289 DVIAPSCYSCFDYTNALADLVVGYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYL 348
Query: 366 EITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARY 425
EITPTIS+G+RRP VMETVKADD+AK+G+GPSQPAPKF+GN+IAFF+NL+GPKGLEFARY
Sbjct: 349 EITPTISNGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARY 408
Query: 426 SLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 474
SLDYHTIRN+L+V+R WGK+RADKH P+YAKKIV++YNQ G+ID++LS+
Sbjct: 409 SLDYHTIRNHLYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSN 457
>gi|449433213|ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a reductase,
chloroplastic-like [Cucumis sativus]
Length = 459
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/469 (82%), Positives = 430/469 (91%), Gaps = 14/469 (2%)
Query: 6 ANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHC 65
A A SLPLS+ +C SSSSSSP+ K VKLR+DWR+RS+PIPPGGTYPAK+ C
Sbjct: 3 AIANLCSLPLSLPILC----SSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQC 58
Query: 66 SRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYAR 125
SRCGLCDTYYIAHVKDACAFLGDGMSRIE +E VVHGRGR+ D+LD+TY GVHE+LLYAR
Sbjct: 59 SRCGLCDTYYIAHVKDACAFLGDGMSRIEEMEPVVHGRGRKTDTLDETYFGVHEKLLYAR 118
Query: 126 KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLART 185
K KPVEGAQWTGIVTTIA+EMLK+GMVEAVVCVQS DP+DRLSPRP+LART
Sbjct: 119 KIKPVEGAQWTGIVTTIAVEMLKSGMVEAVVCVQS----------DPEDRLSPRPILART 168
Query: 186 PEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLG 245
PEEVLAA+GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE HLNLEKLYVLG
Sbjct: 169 PEEVLAARGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLG 228
Query: 246 TNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 305
TNCVDNGTREGLDKFLKAAS+EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV
Sbjct: 229 TNCVDNGTREGLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 288
Query: 306 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLL 365
DVIAPSCYSCFDYTNALADLVVGYMGVPKY+GISMTQHPQYITVRNERG+EML LV+ L
Sbjct: 289 DVIAPSCYSCFDYTNALADLVVGYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYL 348
Query: 366 EITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARY 425
EITPTIS+G+RRP VMETVKADD+AK+G+GPSQPAPKF+GN+IAFF+NL+GPKGLEFARY
Sbjct: 349 EITPTISNGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARY 408
Query: 426 SLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 474
SLDYHTIRN+L+V+R WGK+RADKH P+YAKKIV++YNQ G+ID++LS+
Sbjct: 409 SLDYHTIRNHLYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSN 457
>gi|356577586|ref|XP_003556905.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
Length = 452
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/475 (80%), Positives = 421/475 (88%), Gaps = 23/475 (4%)
Query: 1 MTCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYP 60
M+ AK SSL +S++ SS SKD S L++DWR +SKPIPPGGTYP
Sbjct: 1 MSSLFLYAKLSSLSISLTI---------RSSSSKDTS----LKQDWRTKSKPIPPGGTYP 47
Query: 61 AKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
AKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS IE LE VVHGRGR+ D++D+TYLGV+EE
Sbjct: 48 AKDHCSRCGLCDTYYIAHVKNACAFLGDGMSNIERLEPVVHGRGRKTDNMDETYLGVYEE 107
Query: 121 LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRP 180
LLYARK +P EGAQWTGIVTTIAIEMLK+GMVEAV+CVQS DPDD+ +PRP
Sbjct: 108 LLYARKLQPAEGAQWTGIVTTIAIEMLKSGMVEAVICVQS----------DPDDKFAPRP 157
Query: 181 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK 240
VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC VGCQVQALRSVEHHLNL+K
Sbjct: 158 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCVVGCQVQALRSVEHHLNLDK 217
Query: 241 LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 300
LYVLGTNCVDNGTREGLDKFLKAAS PE VLHYEFMQDYKVHLKHLDGHIEEVPYFCLP
Sbjct: 218 LYVLGTNCVDNGTREGLDKFLKAASQSPEIVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 277
Query: 301 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 360
NDLVDVIAPSCYSCFDYTNAL DLVVGYMGVPK++GI MTQHPQY+TVRN+RG+EMLSL
Sbjct: 278 TNDLVDVIAPSCYSCFDYTNALVDLVVGYMGVPKHSGIGMTQHPQYVTVRNKRGREMLSL 337
Query: 361 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 420
++ LLEITPTIS+G+RRPFVMETVKADD AK+GRGPSQPAPKF+G+L+AF +NLVGPKGL
Sbjct: 338 IEKLLEITPTISTGNRRPFVMETVKADDEAKLGRGPSQPAPKFIGSLLAFILNLVGPKGL 397
Query: 421 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 475
EFARYSLDYHTIRNYLHVNR WGK+RADKHMP+YAKKIV+ YNQNGQI++MLS+K
Sbjct: 398 EFARYSLDYHTIRNYLHVNRMWGKERADKHMPTYAKKIVDSYNQNGQIEKMLSNK 452
>gi|224110688|ref|XP_002315601.1| predicted protein [Populus trichocarpa]
gi|222864641|gb|EEF01772.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/433 (86%), Positives = 401/433 (92%), Gaps = 10/433 (2%)
Query: 43 REDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHG 102
REDWR+RSKPIPPGG YPAKDHCS+CGLCDTYY+AHVK+ACAFLGDGMS+IEGLE VVHG
Sbjct: 34 REDWRQRSKPIPPGGIYPAKDHCSQCGLCDTYYVAHVKNACAFLGDGMSKIEGLEPVVHG 93
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLV 162
RGR+ DS D+ Y GVHEELLYARKTKPVEGAQWTGIVT+IAIEMLK+GMVEAV+CVQS
Sbjct: 94 RGRKADSFDEAYFGVHEELLYARKTKPVEGAQWTGIVTSIAIEMLKSGMVEAVICVQS-- 151
Query: 163 ILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 222
DP+DR SPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV
Sbjct: 152 --------DPEDRFSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 203
Query: 223 GCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 282
GCQVQALRSVEHHLNL+KLYVLGTNCVDNGTREGLDKFLKAAS EPETVLHYEFMQDYKV
Sbjct: 204 GCQVQALRSVEHHLNLDKLYVLGTNCVDNGTREGLDKFLKAASDEPETVLHYEFMQDYKV 263
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
HLKHLDG IEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY G+SMTQ
Sbjct: 264 HLKHLDGRIEEVPYFCLPANELVDVIAPSCYSCFDYTNALADLVVGYMGVPKYPGVSMTQ 323
Query: 343 HPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPK 402
HPQYITVRNERG+EM+ LVKNLLEITPTI+SGDRRPFVMETV ADDNAK+G+GPSQP PK
Sbjct: 324 HPQYITVRNERGREMIGLVKNLLEITPTINSGDRRPFVMETVNADDNAKLGKGPSQPLPK 383
Query: 403 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
F+GN IAF +NLVGPKGLEFARYSLDYHTIRNYL+ NR WGK RAD+H PSYAKKIVE Y
Sbjct: 384 FIGNFIAFLLNLVGPKGLEFARYSLDYHTIRNYLYTNRTWGKDRADRHTPSYAKKIVESY 443
Query: 463 NQNGQIDQMLSSK 475
N+NGQID ML +K
Sbjct: 444 NKNGQIDLMLQNK 456
>gi|30678943|ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
gi|75150253|sp|Q8GS60.1|HCAR_ARATH RecName: Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|25083091|gb|AAN72040.1| unknown protein [Arabidopsis thaliana]
gi|26451024|dbj|BAC42618.1| unknown protein [Arabidopsis thaliana]
gi|30387563|gb|AAP31947.1| At1g04620 [Arabidopsis thaliana]
gi|332189601|gb|AEE27722.1| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
Length = 462
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/438 (86%), Positives = 405/438 (92%), Gaps = 10/438 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE
Sbjct: 35 KKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLE 94
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVC
Sbjct: 95 PVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVC 154
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRL
Sbjct: 155 VQS----------DPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRL 204
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE HLNLEKLYVLGTNCVDNGTR+GLDKFLKAAS EPETVLHYEFM
Sbjct: 205 LFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFM 264
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKV LKHLDGHIEEVPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G
Sbjct: 265 QDYKVQLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSG 324
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
++MT HPQYITVRNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+
Sbjct: 325 LNMTDHPQYITVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPA 384
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
QPAP FVGN+IAF +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKK
Sbjct: 385 QPAPLFVGNIIAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKK 444
Query: 458 IVEMYNQNGQIDQMLSSK 475
IVEMYN+NGQID+MLS K
Sbjct: 445 IVEMYNKNGQIDKMLSKK 462
>gi|2494116|gb|AAB80625.1| Similar to Synechocystis hypothetical protein (gb|D90915)
[Arabidopsis thaliana]
Length = 433
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/438 (83%), Positives = 394/438 (89%), Gaps = 22/438 (5%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE
Sbjct: 18 KKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLE 77
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVC
Sbjct: 78 PVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVC 137
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRL
Sbjct: 138 VQS----------DPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRL 187
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE HLNLEKLYVLGTNCVDNGTR+GLDKFLKAAS EPETVLHYEFM
Sbjct: 188 LFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFM 247
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKV PYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G
Sbjct: 248 QDYKV------------PYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSG 295
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
++MT HPQYITVRNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+
Sbjct: 296 LNMTDHPQYITVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPA 355
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
QPAP FVGN+IAF +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKK
Sbjct: 356 QPAPLFVGNIIAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKK 415
Query: 458 IVEMYNQNGQIDQMLSSK 475
IVEMYN+NGQID+MLS K
Sbjct: 416 IVEMYNKNGQIDKMLSKK 433
>gi|75144471|sp|Q7XTG7.2|HCAR_ORYSJ RecName: Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|38344778|emb|CAE01504.2| OSJNBb0026L04.9 [Oryza sativa Japonica Group]
gi|38347660|emb|CAE04699.2| OSJNBa0041M06.1 [Oryza sativa Japonica Group]
gi|116309054|emb|CAH66165.1| H0107B07.4 [Oryza sativa Indica Group]
Length = 471
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/471 (79%), Positives = 412/471 (87%), Gaps = 19/471 (4%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQS DPDDRL+P PVL
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQS----------DPDDRLAPMPVL 180
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY 242
ARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE +L LEKLY
Sbjct: 181 ARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLY 240
Query: 243 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 302
VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA
Sbjct: 241 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAK 300
Query: 303 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 362
DLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYITVRN+RG+EMLSLV+
Sbjct: 301 DLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYPGVSMTQHPQYITVRNDRGREMLSLVE 360
Query: 363 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 422
LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPAP FVGN+IAF +NL+GPKGLEF
Sbjct: 361 GLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPAPTFVGNVIAFLLNLIGPKGLEF 420
Query: 423 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 473
ARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE Y+++G+I+ ML
Sbjct: 421 ARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVEAYDKDGRIESMLQ 471
>gi|326525733|dbj|BAJ88913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/433 (82%), Positives = 393/433 (90%), Gaps = 11/433 (2%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
LREDWR++S+PIPPGG YPAKD CS CGLCDTYYIAHV +ACAFLGDGMSR+E LE VVH
Sbjct: 48 LREDWREKSRPIPPGGVYPAKDKCSNCGLCDTYYIAHVNNACAFLGDGMSRVEDLEPVVH 107
Query: 102 GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSL 161
GRGR KD++D+ Y GVHE+LLYARKT+PV+GAQWTGI+TTIA+EMLK MV+AVVCVQS
Sbjct: 108 GRGR-KDTMDEMYYGVHEQLLYARKTEPVQGAQWTGIITTIAVEMLKANMVDAVVCVQS- 165
Query: 162 VILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 221
DPDDR +PRPVLARTPEEV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCG
Sbjct: 166 ---------DPDDRFAPRPVLARTPEEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 216
Query: 222 VGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 281
VGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFL AASSEPETVLHYEFMQDYK
Sbjct: 217 VGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYK 276
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 341
VHLKHLDGHIEEVPYF LPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMT
Sbjct: 277 VHLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMT 336
Query: 342 QHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAP 401
QHPQYITVRNERG+EMLSLV++LLE TPT+SSG R+PFVMETVKADD AKMG+GPS PAP
Sbjct: 337 QHPQYITVRNERGREMLSLVESLLESTPTVSSGARQPFVMETVKADDAAKMGKGPSNPAP 396
Query: 402 KFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEM 461
FVGN+IAF +NL+GPKGLEF RYSLDYHTIRNYL+VNRAWG RA++HMPSYAKKIVE
Sbjct: 397 IFVGNIIAFLLNLIGPKGLEFGRYSLDYHTIRNYLYVNRAWGSSRAEQHMPSYAKKIVEA 456
Query: 462 YNQNGQIDQMLSS 474
YN++G+ID ML
Sbjct: 457 YNKDGRIDSMLQQ 469
>gi|326528691|dbj|BAJ97367.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 483
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/433 (82%), Positives = 392/433 (90%), Gaps = 11/433 (2%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
LREDWR++S+PIPPGG YPAKD CS CGLCDTYYIAHV +ACAFLGDGMSR+E LE VVH
Sbjct: 60 LREDWREKSRPIPPGGVYPAKDKCSNCGLCDTYYIAHVNNACAFLGDGMSRVEDLEPVVH 119
Query: 102 GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSL 161
GRGR KD++D+ Y GVHE+LLYARKT+PV+GAQWTGI+TTIA+EMLK MV+AVVCVQS
Sbjct: 120 GRGR-KDTMDEMYYGVHEQLLYARKTEPVQGAQWTGIITTIAVEMLKANMVDAVVCVQS- 177
Query: 162 VILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 221
DPDDR +PRPVLARTPEEV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCG
Sbjct: 178 ---------DPDDRFAPRPVLARTPEEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 228
Query: 222 VGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 281
VGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFL AASSEPETVLHYEFMQDYK
Sbjct: 229 VGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYK 288
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 341
VHLKHLDGHIEEVPYF LPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMT
Sbjct: 289 VHLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMT 348
Query: 342 QHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAP 401
QHPQYITVRNERG+EMLSLV+ LLE TPT+SSG R+PFVMETVKADD AKMG+GPS PAP
Sbjct: 349 QHPQYITVRNERGREMLSLVEGLLESTPTVSSGARQPFVMETVKADDAAKMGKGPSNPAP 408
Query: 402 KFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEM 461
FVGN+IAF +NL+GPKGLEF RYSLDYHTIRNYL+VNRAWG RA++HMPSYAKKIVE
Sbjct: 409 IFVGNIIAFLLNLIGPKGLEFGRYSLDYHTIRNYLYVNRAWGSSRAEQHMPSYAKKIVEA 468
Query: 462 YNQNGQIDQMLSS 474
YN++G+ID ML
Sbjct: 469 YNKDGRIDSMLQQ 481
>gi|357144250|ref|XP_003573225.1| PREDICTED: uncharacterized protein all1601-like [Brachypodium
distachyon]
Length = 466
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/439 (80%), Positives = 394/439 (89%), Gaps = 11/439 (2%)
Query: 35 DGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIE 94
+G +REDWR++S PIPPGG YPAKD CSRCGLCDTYYIAHV ACAFLGDGMSR+E
Sbjct: 35 NGRGKKAVREDWREKSNPIPPGGVYPAKDKCSRCGLCDTYYIAHVNTACAFLGDGMSRVE 94
Query: 95 GLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
LE +VHGRGR KD++D+ Y GVH++LLY+RKT+PV+GAQWTGIVTTIA+EMLK MV+A
Sbjct: 95 DLEPIVHGRGR-KDTMDELYFGVHDQLLYSRKTQPVQGAQWTGIVTTIAVEMLKANMVDA 153
Query: 155 VVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV 214
VVCVQS DP+DRL+PRPVLARTPEEV+AAKGVKPTLSPNL+TLALVEAAGV
Sbjct: 154 VVCVQS----------DPEDRLAPRPVLARTPEEVIAAKGVKPTLSPNLDTLALVEAAGV 203
Query: 215 KRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHY 274
KRLLFCGVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAAS+EPETVLHY
Sbjct: 204 KRLLFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASTEPETVLHY 263
Query: 275 EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 334
EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPK
Sbjct: 264 EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPK 323
Query: 335 YTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGR 394
Y+G+SMTQHPQYITVRNERG+EMLSLV+ LLE TPT+SSG R FVMETVKADD AKMG+
Sbjct: 324 YSGVSMTQHPQYITVRNERGREMLSLVEGLLESTPTVSSGAREAFVMETVKADDAAKMGK 383
Query: 395 GPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSY 454
GP+ PAP+FVGN+IAF +NL+GPKGLEF RYSLDYHTIRNYL+V RAWG RA++HMPSY
Sbjct: 384 GPANPAPRFVGNIIAFLLNLIGPKGLEFGRYSLDYHTIRNYLYVKRAWGSTRAEQHMPSY 443
Query: 455 AKKIVEMYNQNGQIDQMLS 473
AKKIVE YN++G+ID ML
Sbjct: 444 AKKIVEAYNKDGRIDSMLQ 462
>gi|218192630|gb|EEC75057.1| hypothetical protein OsI_11171 [Oryza sativa Indica Group]
Length = 503
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/493 (76%), Positives = 418/493 (84%), Gaps = 31/493 (6%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLV----IL--------SYYYN- 169
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQ + IL +++
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQRHLNNNQILHNCFPLQKDFFHGL 190
Query: 170 ---------SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 220
SDPDDRL+P PVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFC
Sbjct: 191 EKTVVCLLCSDPDDRLAPMPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 250
Query: 221 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
GVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY
Sbjct: 251 GVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 310
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
KVHLKHLDGHIEEVPYFCLPA DLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SM
Sbjct: 311 KVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYPGVSM 370
Query: 341 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 400
TQHPQYITVRN+RG+EMLSLV+ LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPA
Sbjct: 371 TQHPQYITVRNDRGREMLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPA 430
Query: 401 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 460
P FVGN+IAF +NL+GPKGLEFARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE
Sbjct: 431 PTFVGNVIAFLLNLIGPKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVE 490
Query: 461 MYNQNGQIDQMLS 473
Y+++G+I+ ML
Sbjct: 491 AYDKDGRIESMLQ 503
>gi|414869973|tpg|DAA48530.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 470
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/437 (80%), Positives = 396/437 (90%), Gaps = 12/437 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRL
Sbjct: 162 VQS----------DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRL 211
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE +L LEKLYVLGTN DNGTREGLDKFLKAASSEPETV+HYEFM
Sbjct: 212 LFCGVGCQVQALRSVEKYLGLEKLYVLGTN-FDNGTREGLDKFLKAASSEPETVMHYEFM 270
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G
Sbjct: 271 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAG 330
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
+SMTQHPQYITVRN+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS
Sbjct: 331 VSMTQHPQYITVRNDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPS 390
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
+PAP+FVG+++AF +NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKK
Sbjct: 391 KPAPRFVGDILAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKK 450
Query: 458 IVEMYNQNGQIDQMLSS 474
IVE Y+++G+I+ M++
Sbjct: 451 IVEAYDKDGRIEAMVTQ 467
>gi|148906965|gb|ABR16627.1| unknown [Picea sitchensis]
Length = 462
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/474 (75%), Positives = 401/474 (84%), Gaps = 18/474 (3%)
Query: 2 TCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPA 61
+C +KF L + +S C SSS +S K ++LR+DWR+RS+PI PGG YPA
Sbjct: 7 SCTPFFSKFQPLFVPLSVRCSSSSGASR--------KEIQLRDDWRERSRPITPGGIYPA 58
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
KDHCS+CGLCDTYYIAHVK AC+FLGDGMS+IE LE VHGRGR++DSLDD Y GVHEE+
Sbjct: 59 KDHCSQCGLCDTYYIAHVKKACSFLGDGMSKIEVLEPRVHGRGRKEDSLDDLYFGVHEEV 118
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
YARK +P+EGAQWTGIVTTIAIEML++ V+AV+CVQS D +DR SP+P
Sbjct: 119 NYARKIEPLEGAQWTGIVTTIAIEMLRSNKVDAVICVQS----------DAEDRFSPKPF 168
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 241
LARTPEEVLA +GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR+VE +L LEKL
Sbjct: 169 LARTPEEVLAGRGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRTVEKYLGLEKL 228
Query: 242 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 301
YVLGTNCVDNGTREGLDKFLK AS P+TVLHYEFMQDYKVHLKHLDGH EEVPYFCLPA
Sbjct: 229 YVLGTNCVDNGTREGLDKFLKVASDSPDTVLHYEFMQDYKVHLKHLDGHTEEVPYFCLPA 288
Query: 302 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
++L DVIAPSCYSCFDYTNALADLVVGYMGVPKY GISMTQHPQYITVRNERG+EML +
Sbjct: 289 DELTDVIAPSCYSCFDYTNALADLVVGYMGVPKYPGISMTQHPQYITVRNERGREMLDMA 348
Query: 362 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 421
++LLEITPT+SSG RR FVMETVKADD AK +G SQP P+FVGN IAF +NL GPKGLE
Sbjct: 349 RHLLEITPTVSSGKRRSFVMETVKADDKAKTAKGNSQPVPRFVGNAIAFILNLFGPKGLE 408
Query: 422 FARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 475
FARYSLDYHTIRNYLHV R WGK+RA+KH+PSYAKKIV MYN NG+ID++L +K
Sbjct: 409 FARYSLDYHTIRNYLHVYRTWGKQRAEKHIPSYAKKIVTMYNDNGEIDKLLFTK 462
>gi|242079547|ref|XP_002444542.1| hypothetical protein SORBIDRAFT_07g023570 [Sorghum bicolor]
gi|241940892|gb|EES14037.1| hypothetical protein SORBIDRAFT_07g023570 [Sorghum bicolor]
Length = 478
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/437 (79%), Positives = 395/437 (90%), Gaps = 11/437 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ LREDWR++SKPIPPG YPAKDHCS CGLCDTYY+AHVK ACAFLG+GMSR+E LE
Sbjct: 50 RAKALREDWRQKSKPIPPGAVYPAKDHCSHCGLCDTYYVAHVKTACAFLGEGMSRVEDLE 109
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PV+GAQWTGIVTTIA+EMLK +V+AVVC
Sbjct: 110 PQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVQGAQWTGIVTTIAVEMLKANLVDAVVC 168
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRL
Sbjct: 169 VQS----------DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRL 218
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAAS+EPETV+HYEFM
Sbjct: 219 LFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASNEPETVMHYEFM 278
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G
Sbjct: 279 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAG 338
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
+SMTQHPQYITVRN+RG+EMLSLV LLE TPTISSG R+PFVMETVKADD AK+G+ PS
Sbjct: 339 VSMTQHPQYITVRNDRGREMLSLVDGLLESTPTISSGSRQPFVMETVKADDAAKLGKDPS 398
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
+PAP+FVG+++AF +NLVGPKGLEFARYSLDYHTIRNYLHV R WGK+RA++H+P YAKK
Sbjct: 399 KPAPRFVGDILAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRVWGKQRAEQHIPGYAKK 458
Query: 458 IVEMYNQNGQIDQMLSS 474
IVE Y+++G+I+ M++
Sbjct: 459 IVEAYDKDGRIEAMVTQ 475
>gi|212722724|ref|NP_001131424.1| uncharacterized protein LOC100192754 [Zea mays]
gi|194691478|gb|ACF79823.1| unknown [Zea mays]
Length = 470
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/437 (80%), Positives = 395/437 (90%), Gaps = 12/437 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRL
Sbjct: 162 VQS----------DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRL 211
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE +L LEKLYVLGTN DNGTREGLDKFLKAASSEPETV+HYEFM
Sbjct: 212 LFCGVGCQVQALRSVEKYLGLEKLYVLGTN-FDNGTREGLDKFLKAASSEPETVMHYEFM 270
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G
Sbjct: 271 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAG 330
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 397
+SMTQHPQYITVRN+RG+ ML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS
Sbjct: 331 VSMTQHPQYITVRNDRGQVMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPS 390
Query: 398 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 457
+PAP+FVG+++AF +NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKK
Sbjct: 391 KPAPRFVGDILAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKK 450
Query: 458 IVEMYNQNGQIDQMLSS 474
IVE Y+++G+I+ M++
Sbjct: 451 IVEAYDKDGRIEAMVTQ 467
>gi|414869974|tpg|DAA48531.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 512
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/478 (73%), Positives = 398/478 (83%), Gaps = 52/478 (10%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
VQS DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRL
Sbjct: 162 VQS----------DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRL 211
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
LFCGVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETV+HYEFM
Sbjct: 212 LFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVMHYEFM 271
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G
Sbjct: 272 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAG 331
Query: 338 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKM----- 392
+SMTQHPQYITVRN+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+
Sbjct: 332 VSMTQHPQYITVRNDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGTSPN 391
Query: 393 ------------------------------------GRGPSQPAPKFVGNLIAFFINLVG 416
G+GPS+PAP+FVG+++AF +NLVG
Sbjct: 392 HHLYGILVLSIGIELVVTMTIRLAYIHVNKQTNGSTGKGPSKPAPRFVGDILAFLLNLVG 451
Query: 417 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 474
PKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I+ M++
Sbjct: 452 PKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEAMVTQ 509
>gi|168035893|ref|XP_001770443.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678320|gb|EDQ64780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/457 (72%), Positives = 384/457 (84%), Gaps = 13/457 (2%)
Query: 17 ISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYI 76
+ T+ C S S+ + +V DWR+++KPI PG TYPAKDHCS+CGLCDTYYI
Sbjct: 1 MRTLICLVLSVSNVVVLGYATATVDSPSDWREKAKPIKPGSTYPAKDHCSQCGLCDTYYI 60
Query: 77 AHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWT 136
AHVKDACAFLGDGMSRIE LE VHGRGR +S++D + GVH+E+LYARKT+PVEGAQWT
Sbjct: 61 AHVKDACAFLGDGMSRIEVLEPKVHGRGRNPESMEDLFFGVHDEMLYARKTEPVEGAQWT 120
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GIVTTIA+EML+ MV+AV+CVQS DP+DR P PVLARTPEEVLAA+GVK
Sbjct: 121 GIVTTIAMEMLRKDMVDAVICVQS----------DPEDRFKPNPVLARTPEEVLAARGVK 170
Query: 197 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREG 256
PTLSPNL+TLA VEAAGVKRLLFCGVGCQVQALRSVE HL LEKLYVLGTNCVDNG R+G
Sbjct: 171 PTLSPNLSTLAFVEAAGVKRLLFCGVGCQVQALRSVEKHLGLEKLYVLGTNCVDNGPRQG 230
Query: 257 LDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCF 316
LDKFLKAAS +P+TVLHYEFMQDYK L + VPYFCLPA+DL DVIAPSCYSCF
Sbjct: 231 LDKFLKAASDDPDTVLHYEFMQDYKALYHKL---LYCVPYFCLPADDLTDVIAPSCYSCF 287
Query: 317 DYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDR 376
DYTN LADLVVGYMGVPKY G+ MT+HPQYITVRN RGKEML LV+ LL++TPTISSG+R
Sbjct: 288 DYTNGLADLVVGYMGVPKYPGVPMTRHPQYITVRNGRGKEMLDLVRPLLDVTPTISSGNR 347
Query: 377 RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYL 436
PFVMETVKADD AK+G+ +QPAP+FVGN+IA+ +NLVGPKGLEF RYSLDYH IRNYL
Sbjct: 348 GPFVMETVKADDKAKLGKEKTQPAPRFVGNIIAWLLNLVGPKGLEFGRYSLDYHNIRNYL 407
Query: 437 HVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 473
HV+RAWG+KRAD+H+PSYAKK+V +YN+NG+ID++L
Sbjct: 408 HVHRAWGQKRADQHIPSYAKKLVSLYNKNGEIDKILE 444
>gi|222628616|gb|EEE60748.1| hypothetical protein OsJ_14296 [Oryza sativa Japonica Group]
Length = 455
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/493 (67%), Positives = 372/493 (75%), Gaps = 79/493 (16%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLV----IL--------SYYYN- 169
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQ + IL +++
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQRHLNNNQILHNCFPLQKDFFHGL 190
Query: 170 ---------SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 220
SDPDDRL+P PVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFC
Sbjct: 191 EKTVVCLLCSDPDDRLAPMPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 250
Query: 221 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
GVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY
Sbjct: 251 GVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 310
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
K VPYFCLPA DLVDVIAPSCY
Sbjct: 311 K------------VPYFCLPAKDLVDVIAPSCY--------------------------- 331
Query: 341 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 400
RN+RG+EMLSLV+ LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPA
Sbjct: 332 ---------RNDRGREMLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPA 382
Query: 401 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 460
P FVGN+IAF +NL+GPKGLEFARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE
Sbjct: 383 PTFVGNVIAFLLNLIGPKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVE 442
Query: 461 MYNQNGQIDQMLS 473
Y+++G+I+ ML
Sbjct: 443 AYDKDGRIESMLQ 455
>gi|255079718|ref|XP_002503439.1| predicted protein [Micromonas sp. RCC299]
gi|226518706|gb|ACO64697.1| predicted protein [Micromonas sp. RCC299]
Length = 530
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 283/434 (65%), Positives = 344/434 (79%), Gaps = 12/434 (2%)
Query: 39 SVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLET 98
S + EDWR++SKPI PGG YPAK+HCS+CGLCDTYYIAHVKDACAFLGDGMSRIE LE
Sbjct: 38 SAAIAEDWREKSKPIAPGGNYPAKEHCSQCGLCDTYYIAHVKDACAFLGDGMSRIETLEP 97
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
VHGRGR + D+ LGV +E+ YA++ +PVEGAQWTGIVT+IAIEMLK+G VE VVCV
Sbjct: 98 TVHGRGRDLGN-DEMRLGVVDEVFYAKRNRPVEGAQWTGIVTSIAIEMLKSGKVEGVVCV 156
Query: 159 QSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLL 218
S DPD+ + PRP+LA T EE+L++KGVKP LSPNL+ LA VEA G+KR+L
Sbjct: 157 AS----------DPDNAMHPRPILATTVEEILSSKGVKPALSPNLSVLAEVEARGLKRVL 206
Query: 219 FCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ 278
F GVGC VQALRSVE +L LEKLYV+GTNC DNG +E L KFL+ AS +P TV+HYEFMQ
Sbjct: 207 FIGVGCAVQALRSVEKYLGLEKLYVMGTNCTDNGRKETLSKFLENASEDPATVVHYEFMQ 266
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
DY+VHLKH DG E+VPYFCLPAN L DVIAPSCYSCFDY N LAD+VVGYMGVP Y
Sbjct: 267 DYQVHLKHTDGSFEKVPYFCLPANKLKDVIAPSCYSCFDYVNGLADIVVGYMGVPYYH-T 325
Query: 339 SMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQ 398
MT+HPQY+TVRNERGKEM +++ ++TP++SSG+R+PFVM+TV +DD A +GRGP +
Sbjct: 326 DMTRHPQYVTVRNERGKEMFDMIRGDCDVTPSVSSGERKPFVMQTVISDDEATLGRGPEE 385
Query: 399 PAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKI 458
PAP VG IA+ + +GPKG EF YSLDYHTIRNYL+V R +G++RA +H+P YA+ +
Sbjct: 386 PAPLPVGKAIAWLLEKIGPKGKEFGMYSLDYHTIRNYLYVKRTFGEERATRHVPDYARLV 445
Query: 459 VEMYNQNGQIDQML 472
V+ YN G +D+ L
Sbjct: 446 VDEYNVYGAVDERL 459
>gi|384250915|gb|EIE24393.1| hypothetical protein COCSUDRAFT_14021 [Coccomyxa subellipsoidea
C-169]
Length = 436
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 290/427 (67%), Positives = 335/427 (78%), Gaps = 16/427 (3%)
Query: 43 REDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHG 102
+ DWR ++KPI G TYPAK CS CGLCDTYY+AHVKDACAFLGDGMS+IE LE VHG
Sbjct: 24 KADWRSKAKPIKEGSTYPAKQFCSHCGLCDTYYVAHVKDACAFLGDGMSKIESLEEQVHG 83
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLV 162
R R DSLDD + GVHE+++YA T PV GAQWTGIVT IAIEML++G VEAVVCVQ+
Sbjct: 84 RRRDLDSLDDLHFGVHEDMMYALNTPPVPGAQWTGIVTQIAIEMLESGQVEAVVCVQN-- 141
Query: 163 ILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 222
D DR SP+P +AR E++L AKGVKPTLSPNLNTLA VEA VKRLLF GV
Sbjct: 142 --------DEADRFSPKPFVARCKEDILKAKGVKPTLSPNLNTLATVEALDVKRLLFIGV 193
Query: 223 GCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 282
QALRSVE +L LE LYVLGTNCVDNG REGL+KFL AASS+P+TVLHYEFMQDY+V
Sbjct: 194 ----QALRSVEKYLGLEALYVLGTNCVDNGPREGLEKFLNAASSDPDTVLHYEFMQDYRV 249
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
H+KHLDG E VPYFCLPANDL DVIAPSCYSCFDY NALADLVVGYMGVP Y G MT
Sbjct: 250 HIKHLDGSFEYVPYFCLPANDLTDVIAPSCYSCFDYPNALADLVVGYMGVP-YYGTDMTS 308
Query: 343 HPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPK 402
HPQYITVRN RG+ M+ VK L+I PT+++GDR PFVM+TV +DD K+G P+ PAP+
Sbjct: 309 HPQYITVRNARGRAMMDAVKPRLKILPTMAAGDRTPFVMQTVLSDDAGKLGTAPN-PAPR 367
Query: 403 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
FVGN IA + +GPKGLEF RYS+DYH IRN+++VNR G RA +H P +AK++V MY
Sbjct: 368 FVGNAIAKVLTWLGPKGLEFGRYSIDYHYIRNWIYVNRHMGPARAQRHTPEFAKRLVAMY 427
Query: 463 NQNGQID 469
N+ G+ID
Sbjct: 428 NEKGEID 434
>gi|302842339|ref|XP_002952713.1| hypothetical protein VOLCADRAFT_93375 [Volvox carteri f.
nagariensis]
gi|300262057|gb|EFJ46266.1| hypothetical protein VOLCADRAFT_93375 [Volvox carteri f.
nagariensis]
Length = 496
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/460 (61%), Positives = 354/460 (76%), Gaps = 20/460 (4%)
Query: 24 SSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDAC 83
S +++P+++ S L DWR+RSKPI PG +YPAK +CS CGLCDTYY+AHVKDAC
Sbjct: 46 SDGIDAATPTRELGSSSPLPADWRQRSKPISPGSSYPAKQYCSSCGLCDTYYVAHVKDAC 105
Query: 84 AFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIA 143
AFLGDGMSR+E LE VHGR R + D+ + GV + YA T PVEGAQWTGIVT IA
Sbjct: 106 AFLGDGMSRVERLEERVHGRRRNANDDDELHFGVTRSMSYAVNTPPVEGAQWTGIVTQIA 165
Query: 144 IEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLA--------AKGV 195
IEML++G VEAVVCVQS D +DR +P+PV+ART E+++ A+GV
Sbjct: 166 IEMLRSGKVEAVVCVQS----------DENDRFTPKPVVARTVEDIIKVGRGLWGRARGV 215
Query: 196 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTRE 255
KPTLSPNLN LA VEA VK+LLF GVGCQVQALRS+E +L L+KLYVLGTNCVDNG R
Sbjct: 216 KPTLSPNLNVLATVEALQVKKLLFIGVGCQVQALRSIEPYLGLDKLYVLGTNCVDNGPRA 275
Query: 256 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 315
GLDKFL+AAS+ P+ LHYEFMQDY+VH+KH DG E VPYFCLPA +L DVIAPSCYSC
Sbjct: 276 GLDKFLRAASTRPQEALHYEFMQDYRVHVKHTDGSFEYVPYFCLPAKELNDVIAPSCYSC 335
Query: 316 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGD 375
FDYTN LAD+VVGYMGVP Y + M +HPQY+ VRNERG+E+L VK+ LE++PT+S GD
Sbjct: 336 FDYTNGLADMVVGYMGVP-YLDLDMIRHPQYLVVRNERGQELLDSVKHRLEMSPTVSMGD 394
Query: 376 RRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 435
RR VM+TV +DD AK+G PAP+++GNL+A+ +NL+GPKGLEF +YS+DYH IRNY
Sbjct: 395 RRSVVMQTVASDDQAKLGE-LRDPAPRWLGNLLAWLLNLIGPKGLEFGKYSIDYHYIRNY 453
Query: 436 LHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 475
L+V+R WG KRA++H+PS+ K+IV Y+++G + + L+ K
Sbjct: 454 LYVHRNWGAKRAEQHIPSFVKEIVRQYDKDGAVTKRLNLK 493
>gi|307102673|gb|EFN50942.1| hypothetical protein CHLNCDRAFT_55433 [Chlorella variabilis]
Length = 454
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/440 (63%), Positives = 338/440 (76%), Gaps = 21/440 (4%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
DWR +++PIP G +YPAK+HCS CGLCDTYYIAHVK+ACAFLGDGMS+I LE HGR
Sbjct: 18 DWRHKARPIPAGSSYPAKEHCSHCGLCDTYYIAHVKEACAFLGDGMSKIGQLEEQAHGRR 77
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVIL 164
R + S D+ GV +++LYAR VEGAQWTGIVT IAIEML++G V+AVVCVQS
Sbjct: 78 RDQGSEDELRFGVTQQVLYARNAPAVEGAQWTGIVTQIAIEMLESGQVDAVVCVQS---- 133
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
DDR SP+P++AR+ E++LAA+GVKPTLSPNL+ LA VEA VKRLLF GVGC
Sbjct: 134 ------QEDDRFSPKPMVARSREDILAARGVKPTLSPNLSVLATVEALDVKRLLFIGVGC 187
Query: 225 QVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM------- 277
QVQALRS+E HL LEKLYVLGTNCVDNG R+GL+KFL AASS+P+TVLHYEFM
Sbjct: 188 QVQALRSIEPHLQLEKLYVLGTNCVDNGPRQGLEKFLNAASSDPDTVLHYEFMQARERQA 247
Query: 278 --QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY 335
DYKVH+KH DG E +PYFCLPAN+L DVIAPSCYSCFDY NA ADLV+GYMGVP Y
Sbjct: 248 AAADYKVHIKHTDGSFEYIPYFCLPANELNDVIAPSCYSCFDYPNATADLVIGYMGVP-Y 306
Query: 336 TGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG 395
MT H QY+TVRN RG+E+L V++ L + P +SSG R FV++TV ADD AK+G+G
Sbjct: 307 QNTDMTSHLQYLTVRNPRGQELLDSVRHRLVVEPPVSSGSRGAFVLQTVLADDQAKLGKG 366
Query: 396 PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYA 455
P PAP++VGNL+A+ + VGPKGLEFA+YS+DYH IRNY+HV R WG KRA +H+P +A
Sbjct: 367 PD-PAPRWVGNLLAWVLERVGPKGLEFAKYSVDYHYIRNYIHVMRHWGPKRAAQHIPDFA 425
Query: 456 KKIVEMYNQNGQIDQMLSSK 475
++IV YN G + + + K
Sbjct: 426 QRIVAEYNPKGMVSERAALK 445
>gi|159482986|ref|XP_001699546.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272813|gb|EDO98609.1| predicted protein [Chlamydomonas reinhardtii]
Length = 418
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/436 (63%), Positives = 339/436 (77%), Gaps = 23/436 (5%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
L DWR+R+KPI PG +YPAK+HCS CGLCDTYY+AHVKDACAFLG GMSRI+ LE VH
Sbjct: 1 LAPDWRERAKPIQPGSSYPAKEHCSNCGLCDTYYVAHVKDACAFLGPGMSRIDELEERVH 60
Query: 102 GRGRRKDSLDDTYLGVHEE--LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ 159
GR R +S D+ + GV + YA V GAQWTGIVT IAIEML++G V+AVVCVQ
Sbjct: 61 GRRRDVNSDDELHFGVTAPGGMAYAANVPGVPGAQWTGIVTQIAIEMLQSGKVDAVVCVQ 120
Query: 160 SLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLF 219
S D +DR +P+PV+ART E+++ A+GVKPTLSPNLN LA VEA VK+LLF
Sbjct: 121 S----------DENDRFTPKPVVARTVEDIIKARGVKPTLSPNLNVLATVEALQVKKLLF 170
Query: 220 CGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD 279
GVGCQVQALRS+E HL LEKLYVLGTNCVDNG R+GLDKFLKAAS+ P+ LHYEFMQD
Sbjct: 171 IGVGCQVQALRSIEPHLGLEKLYVLGTNCVDNGPRKGLDKFLKAASTRPDQALHYEFMQD 230
Query: 280 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
Y+ VPYFCLPAN+L DVIAPSCYSCFDY NALAD+VVGYMGVP Y
Sbjct: 231 YRWGY---------VPYFCLPANELNDVIAPSCYSCFDYPNALADMVVGYMGVP-YLNKD 280
Query: 340 MTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQP 399
MT HPQY+ VRN+RG E+L V++ L+ITPT+S+GDRR VM+TV +DD AKMG+ P
Sbjct: 281 MTSHPQYVVVRNDRGNELLDSVRHRLQITPTVSTGDRRGIVMQTVASDDEAKMGQ-LRDP 339
Query: 400 APKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIV 459
AP+++GN++A+ +NL+GPKGLEF +YS+DYH IRNYL+VNR WG KRA++H+PS+AKKIV
Sbjct: 340 APRWLGNMLAWLLNLIGPKGLEFGKYSIDYHYIRNYLYVNRKWGAKRAEQHIPSFAKKIV 399
Query: 460 EMYNQNGQIDQMLSSK 475
+ Y+++G + + +S K
Sbjct: 400 QQYDKDGAVSKRISLK 415
>gi|308805665|ref|XP_003080144.1| unnamed protein product [Ostreococcus tauri]
gi|116058604|emb|CAL54311.1| unnamed protein product [Ostreococcus tauri]
Length = 453
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 260/426 (61%), Positives = 325/426 (76%), Gaps = 10/426 (2%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K ++PI G TYPAK+HCS CGLCDT ++A V+DACAFLG GMSR+E LE VVHGRGRR
Sbjct: 34 KSARPIQNGSTYPAKEHCSECGLCDTEHVARVRDACAFLGQGMSRVETLEPVVHGRGRRA 93
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ LGV +E YA +PV+GAQWTG+VT++A ML++GMVE V+CV S
Sbjct: 94 SPDDEDRLGVVDETFYAAMKRPVDGAQWTGVVTSVAKRMLESGMVEGVICVAS------- 146
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
DPD+ +PRP+LA T EE+++A+GVKP+LSPNL+ L+ VEA G+KR+LF GVGC V
Sbjct: 147 ---DPDEPRAPRPILATTVEEIVSARGVKPSLSPNLSVLSEVEARGLKRILFIGVGCAVS 203
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE +L +KLYV+G NC DNG E KF++ +S P TVLHYEFM DY+VH KHL
Sbjct: 204 ALRAVEPYLGFDKLYVMGVNCTDNGRLESFQKFIQLSSENPGTVLHYEFMPDYQVHFKHL 263
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E+VPYFCLPANDLVDVIAPSCYSCFDY N LAD+VVGYMG M +HPQY+
Sbjct: 264 DGTYEKVPYFCLPANDLVDVIAPSCYSCFDYVNGLADVVVGYMGSEYDPSKPMNEHPQYV 323
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
TVRN RG+EM+ LV++ ++++P+ SSGDRRPFVM+TV ADD AK GRGP +PAP+FVG L
Sbjct: 324 TVRNSRGREMIDLVRDDMDVSPSTSSGDRRPFVMQTVVADDEAKFGRGPEKPAPRFVGKL 383
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
IA+ + +GPKG EF YSLDYHTIRNYL+VNR WG +RA +H+P YAK++V Y+ NG
Sbjct: 384 IAWLLTKIGPKGKEFGMYSLDYHTIRNYLYVNRVWGAERAREHVPEYAKRVVREYDVNGA 443
Query: 468 IDQMLS 473
+ L+
Sbjct: 444 VSARLN 449
>gi|414869979|tpg|DAA48536.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 310
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/304 (85%), Positives = 289/304 (95%)
Query: 171 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR
Sbjct: 4 DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 63
Query: 231 SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 290
SVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHLDGH
Sbjct: 64 SVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHLDGH 123
Query: 291 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 350
IEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYITVR
Sbjct: 124 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYITVR 183
Query: 351 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 410
N+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG+++AF
Sbjct: 184 NDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDILAF 243
Query: 411 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 470
+NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I+
Sbjct: 244 LLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEA 303
Query: 471 MLSS 474
M++
Sbjct: 304 MVTQ 307
>gi|303272651|ref|XP_003055687.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463661|gb|EEH60939.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 524
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/430 (61%), Positives = 323/430 (75%), Gaps = 24/430 (5%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
DWR+++KPI PG +YPAK+HCS CGLCDTYY+AHVKDACAFLGDGMS+IE LE VVHGR
Sbjct: 51 DWREKAKPIAPGSSYPAKEHCSNCGLCDTYYVAHVKDACAFLGDGMSKIETLEPVVHGRA 110
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVIL 164
R S D++ LGV ++ YAR PV GAQWTG+VT+IAIEML +G V+ V+CV S
Sbjct: 111 RDLSS-DESRLGVARDVFYARMEAPVRGAQWTGVVTSIAIEMLASGKVDGVICVAS---- 165
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
D + + P+P+LA T EE+L+++GVKP LSPNL+ LA VEA G+K+LLF GVGC
Sbjct: 166 ------DDANPMLPKPILATTAEEILSSRGVKPALSPNLSVLAEVEARGIKKLLFVGVGC 219
Query: 225 QVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
VQALRSVE +L LE LYV+GTNC DNG +E L KFL AS +P+TV+HYEFMQDY
Sbjct: 220 AVQALRSVEKYLGLEALYVVGTNCTDNGRKETLSKFLDNASEDPKTVIHYEFMQDY---- 275
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
++VPYFCLPAN L DVIAPSCYSCFDY N LAD+VVGYMGVP + + MT HP
Sbjct: 276 -------QKVPYFCLPANKLKDVIAPSCYSCFDYVNGLADIVVGYMGVP-WMNVDMTAHP 327
Query: 345 QYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFV 404
QY+TVRNE+G EM L++ +TP++SSGDRRPFVM+TV +DD A +GRGP +PAP V
Sbjct: 328 QYVTVRNEKGAEMFDLIRERAVVTPSVSSGDRRPFVMQTVISDDEATLGRGPEEPAPIAV 387
Query: 405 GNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAW-GKKRADKHMPSYAKKIVEMYN 463
G IA+ + +GPKG EF YSLDYHTIRNYLHV R + G+ RA H+P YA+ +V+ YN
Sbjct: 388 GKAIAWLLEKIGPKGKEFGMYSLDYHTIRNYLHVKRRFGGEARAAAHVPKYARLVVDEYN 447
Query: 464 QNGQIDQMLS 473
+NG ID L+
Sbjct: 448 ENGAIDARLA 457
>gi|145342511|ref|XP_001416225.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576450|gb|ABO94518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 428
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/426 (60%), Positives = 317/426 (74%), Gaps = 23/426 (5%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDS 109
++PI PG YPAK+HCS CGLCDT ++A VK+ACAFLG G SRIE LE VVHGR R
Sbjct: 26 ARPIAPGSAYPAKEHCSECGLCDTAHVARVKEACAFLGPGQSRIETLEPVVHGRARSAAP 85
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYN 169
D++ LGV E Y PV+GAQWTGIVT++A+ L++G VE VVCV S
Sbjct: 86 SDESRLGVALETFYGAMRTPVDGAQWTGIVTSVALAALRSGAVEGVVCVAS--------- 136
Query: 170 SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL 229
DD +PRP+LA T EE+L+A+GVKP+LSPNL+ LA VEA G+KR+LF GVGC V AL
Sbjct: 137 -REDDSRAPRPILATTEEEILSARGVKPSLSPNLSVLAEVEARGLKRVLFIGVGCAVSAL 195
Query: 230 RSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG 289
R+VE HL L+ LYV+GTNC DNG EG +KF+ AAS +P+TV+HYEFMQDY
Sbjct: 196 RAVEPHLGLDALYVVGTNCTDNGRWEGFNKFIDAASDDPDTVMHYEFMQDY--------- 246
Query: 290 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 349
+VPYFCLPA DL DVIAPSCYSCFDY N LAD+VVGYMGVP Y M +HPQY+TV
Sbjct: 247 ---QVPYFCLPAKDLTDVIAPSCYSCFDYVNGLADVVVGYMGVP-YMDKPMDRHPQYVTV 302
Query: 350 RNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIA 409
RNERG+EM+ L++N +EITP+ SSGDRRPFVM+TV ADD AK+GRGP +PAP+ VG L+A
Sbjct: 303 RNERGREMIDLIRNDMEITPSTSSGDRRPFVMQTVVADDEAKLGRGPDKPAPRVVGKLLA 362
Query: 410 FFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQID 469
+ + +GPKG EF YSLDYHTIRNY++VNRAWG KRA++H+P YAK++V Y+ +G I
Sbjct: 363 WLLTKIGPKGKEFGMYSLDYHTIRNYMYVNRAWGAKRAEEHVPEYAKRVVREYDVDGAIS 422
Query: 470 QMLSSK 475
L K
Sbjct: 423 ARLRLK 428
>gi|115457714|ref|NP_001052457.1| Os04g0320100 [Oryza sativa Japonica Group]
gi|113564028|dbj|BAF14371.1| Os04g0320100 [Oryza sativa Japonica Group]
Length = 327
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/321 (79%), Positives = 273/321 (85%), Gaps = 19/321 (5%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQS DPDDRL+P PVL
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQS----------DPDDRLAPMPVL 180
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY 242
ARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE +L LEKLY
Sbjct: 181 ARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLY 240
Query: 243 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 302
VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA
Sbjct: 241 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAK 300
Query: 303 DLVDVIAPSCYSCFDYTNALA 323
DLVDVIAPSCYSCFDYTN LA
Sbjct: 301 DLVDVIAPSCYSCFDYTNGLA 321
>gi|412986215|emb|CCO17415.1| predicted protein [Bathycoccus prasinos]
Length = 480
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 312/441 (70%), Gaps = 27/441 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++ +PI PG +YPAK+HCS CGLCDT I++VKDACAFLG GMSRIE LE VHG+ RR
Sbjct: 49 RKGQPIKPGQSYPAKEHCSNCGLCDTSLISYVKDACAFLGPGMSRIEKLEEKVHGK-RRN 107
Query: 108 DSLDDTYLGV-------------HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
D+ LGV + + YA+K +P+E AQWTGIVT++A+EML+T V+
Sbjct: 108 TETDELRLGVLLNSDTKDNTNNSSQSIFYAKKKQPMEKAQWTGIVTSVALEMLRTKTVDC 167
Query: 155 VVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AG 213
VV V S + D R +P P L T E++LA +GVKP+LSPNL A +E
Sbjct: 168 VVAVGS---------GEADAR-NPEPKLCFTEEDILACRGVKPSLSPNLKVFAEIETNPE 217
Query: 214 VKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLH 273
+K +L+ GVGC V ALR VE +L L+ LYVLGTNC DNG +G KF+ A+ +P+ VLH
Sbjct: 218 IKNVLYIGVGCSVVALREVEQYLGLDNLYVLGTNCADNGRTDGFYKFVNNATDKPDEVLH 277
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD-VIAPSCYSCFDYTNALADLVVGYMGV 332
YEFM DYKVHLK DG E++PYF LPA +L VIA SC SCFDY N LADLVVGYMGV
Sbjct: 278 YEFMPDYKVHLKMRDGSYEKIPYFSLPAKELSSGVIAESCKSCFDYVNGLADLVVGYMGV 337
Query: 333 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKM 392
I M HPQY+TVRNERG++M+ L+KN L+ITP+ + GDR+PFV++TV +DD A +
Sbjct: 338 DYDESIPMNLHPQYVTVRNERGQKMVDLIKNDLQITPSTTRGDRKPFVLQTVISDDEAYL 397
Query: 393 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMP 452
GRGP + AP+FVGNLIA+ +N VGPKG EF YSLDYHTIRNYL+VNR +GK+RA +H+P
Sbjct: 398 GRGPEKGAPRFVGNLIAWVLNKVGPKGKEFGMYSLDYHTIRNYLYVNRIYGKERAKEHIP 457
Query: 453 SYAKKIVEMYN-QNGQIDQML 472
SYA KIVE Y +NG I + L
Sbjct: 458 SYAMKIVEEYEGKNGDISKRL 478
>gi|434397144|ref|YP_007131148.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Stanieria cyanosphaera PCC 7437]
gi|428268241|gb|AFZ34182.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Stanieria cyanosphaera PCC 7437]
Length = 398
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/416 (54%), Positives = 283/416 (68%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKPGSLRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEAQAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D DD Y GVH+E++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ
Sbjct: 65 DHEDDWYFGVHQEMMAARKKQPIAGAQWTGIVSTIACEMLTRGLVEGVVCVQ-------- 116
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N++ +DR P+PV+A TPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 117 -NTE-EDRFQPKPVIATTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +REGL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEKELGLEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV++ L+ P +S GDR+ V +++ A D A P + +
Sbjct: 287 VVRNQTGKEMLELVQDQLDTEPVMSQGDRKQAVQQSIPAYDKAVT-------LPMWAAKM 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R +K D H+P YAK+IV Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRHHPEK-LDAHVPEYAKRIVGQYQ 394
>gi|218437110|ref|YP_002375439.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7424]
gi|218169838|gb|ACK68571.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7424]
Length = 397
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/416 (53%), Positives = 281/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K I PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKAIKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEAQAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D DD Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 65 DRQDDWYFGVHQEMMAAKKKQPIEGAQWTGIVSTIACEMLTRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR P P+LA TPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 118 ---TPEDRFQPMPILATTPEEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR+GL KFL+ S P+T++HYEFMQD++VH KH
Sbjct: 175 ALRAVEKELGLEKLYVLGTPCVDNVTRDGLQKFLETTSKSPDTIVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q++
Sbjct: 235 DGSIETVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWL 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV++ +E +SSGDRR V +++ A D P + L
Sbjct: 287 VVRNDTGREMLDLVRDQIETQGVMSSGDRRQAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 340 MGVVIERIGPKGLEYARFSIDSHYTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQYK 394
>gi|113474585|ref|YP_720646.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Trichodesmium erythraeum IMS101]
gi|110165633|gb|ABG50173.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Trichodesmium erythraeum IMS101]
Length = 401
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/415 (54%), Positives = 282/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL + E LE HGR R
Sbjct: 12 KKAKALRPGARRPAKELCSECGLCDTYYIHYVKEACAFLN---QQFENLEMQTHGRIRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ ++TY GV+++++ +RK +P+EGAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 69 EDENETYFGVYQDMIASRKKQPIEGAQWTGIVSTIACEMLNQGIVEGVVCVQN------- 121
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEEVLAAK KPTLSPNL+ L +E +G+K++L GVGCQ+Q
Sbjct: 122 ---TKEDRFQPMPVIARTPEEVLAAKVNKPTLSPNLSVLEKIEKSGMKKILAIGVGCQIQ 178
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L+LEKLYVLGT CVDN TREGL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 179 ALRAVEKKLDLEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHE 238
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E+VP+F L L D+ APSC SCFDY N LADLVVGYMG T Q+I
Sbjct: 239 DGTVEKVPFFGLNTKKLKDIFAPSCLSCFDYVNGLADLVVGYMGA--------TFGWQWI 290
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
TVRNE GK+ML LV N LE P +S GDR V +++ A D A P + L
Sbjct: 291 TVRNETGKQMLDLVMNQLETQPLMSQGDRHQAVQQSIPAYDQAVT-------LPMWAAKL 343
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+ R+S+D H RNYL+V R + KK D H+P +AKKIVE Y
Sbjct: 344 MGVVIEKIGPKGLEYGRFSIDSHFTRNYLYVKRNYPKK-LDAHVPEFAKKIVEQY 397
>gi|307151243|ref|YP_003886627.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981471|gb|ADN13352.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7822]
Length = 397
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/416 (54%), Positives = 279/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLNQ---QVAELEAAAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+S DD Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML GMVE VVCVQ+
Sbjct: 65 ESQDDWYFGVHQEMMAAKKKQPIEGAQWTGIVSTIACEMLTRGMVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P+LA TPE++LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 118 ---TKEDRFQPMPILATTPEQILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +REGL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEKQLGLEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIETVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV++ +E +SSGDRR V ++ A D P + L
Sbjct: 287 VVRNDTGREMLDLVRDQIETQGVMSSGDRRQAVQNSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL V R + +K A H+P YAK+IV Y
Sbjct: 340 MGVVIERIGPKGLEYARFSIDSHYTRNYLFVKRNYPEKLA-AHVPEYAKRIVGQYK 394
>gi|428202925|ref|YP_007081514.1| coenzyme F420-reducing hydrogenase subunit beta [Pleurocapsa sp.
PCC 7327]
gi|427980357|gb|AFY77957.1| coenzyme F420-reducing hydrogenase, beta subunit [Pleurocapsa sp.
PCC 7327]
Length = 397
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/415 (53%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R
Sbjct: 8 KKARALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELEAEAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GVH++++ ARK +P+EGAQWTGIV+TIA EML G+VE VVC+Q+
Sbjct: 65 DNQDDWYFGVHQDMMAARKKQPIEGAQWTGIVSTIACEMLNRGIVEGVVCIQNTT----- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P+PVLA+TPEEVLAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 120 -----EDRFQPKPVLAKTPEEVLAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL S P+TV+HYEFMQD+KVH KH
Sbjct: 175 ALRTVEKELGLEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPDTVVHYEFMQDFKVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNE+G+EML L + L+ P +S GDR+ V +++ A D P + L
Sbjct: 287 VVRNEKGREMLELAREQLDTQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEK-LESHLPEFAKRIVGQY 393
>gi|22299388|ref|NP_682635.1| hypothetical protein tll1845 [Thermosynechococcus elongatus BP-1]
gi|22295571|dbj|BAC09397.1| tll1845 [Thermosynechococcus elongatus BP-1]
Length = 398
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/419 (54%), Positives = 283/419 (67%), Gaps = 29/419 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + PG PAK CS CGLCDTYYI +VK+ACAFL + E LE HGR R D
Sbjct: 9 KARALKPGSPRPAKTLCSECGLCDTYYIHYVKEACAFLN---QQFETLEQQSHGRARDLD 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+ D+ Y GVH+E++ ARKT+P+ GAQWTGIV+TIAI +L++G VE VVCVQ
Sbjct: 66 NWDECYFGVHQEMMAARKTEPIPGAQWTGIVSTIAIALLESGRVEGVVCVQ--------- 116
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
NS DR +P+PV+ART EE+LAA+ KPTLSPNL+ L VE AG+KRLL GVGCQ+QA
Sbjct: 117 NSQ-SDRFTPKPVIARTREEILAARVNKPTLSPNLSVLEQVEQAGLKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+V+ L LEKLYVLGT CVDN TR GL KFL+ S PETV++YEFMQD++VH KH D
Sbjct: 176 LRAVQDKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVIYYEFMQDFRVHFKHSD 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G E VP+F L N L DV APSC SCFDY N LADLVVGYMG P Q++
Sbjct: 236 GSTETVPFFGLKTNQLKDVFAPSCMSCFDYVNGLADLVVGYMGAPLGW--------QWLV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRNERG+EML LV++ LEI P S+GDR V +++ A D P + L+
Sbjct: 288 VRNERGQEMLDLVRDQLEIQPVTSAGDRHAAVQQSIPAYDKGVT-------LPMWAAKLV 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P++AKKIV+ Y Q
Sbjct: 341 GLVIERIGPKGLEYARFSIDSHFTRNYLYVRRNYPQKLA-AHVPAFAKKIVDQYQLPAQ 398
>gi|354566184|ref|ZP_08985357.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Fischerella sp. JSC-11]
gi|353546692|gb|EHC16140.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Fischerella sp. JSC-11]
Length = 399
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/416 (54%), Positives = 279/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +++ LE H R R
Sbjct: 10 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQVDELEAQTHTRSRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH+ ++ ARK +P+ GAQWTGIV+TIAIEML GMVE VVCVQ+
Sbjct: 67 DNADELYFGVHQSMMAARKQQPIPGAQWTGIVSTIAIEMLNRGMVEGVVCVQN------- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 120 ---TKEDRFGPMPVIARTPEEILAARVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH
Sbjct: 177 ALRTVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 237 DGSTETVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 288
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNERG+EML LVK+ LE P +S GDR V +++ A D P + L
Sbjct: 289 VVRNERGREMLELVKDQLETQPVMSKGDRTAAVQQSIPAYDKGVT-------LPMWAAKL 341
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R +K ++H+P YAK+IV Y
Sbjct: 342 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LEEHVPEYAKRIVGQYK 396
>gi|443478994|ref|ZP_21068668.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena biceps PCC 7429]
gi|443015623|gb|ELS30495.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena biceps PCC 7429]
Length = 398
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/416 (53%), Positives = 284/416 (68%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R+K + PAK+ CS CGLCDT+YI +VKDACAF+ I+ LET HGR R
Sbjct: 8 RRAKGLADTQRRPAKELCSECGLCDTHYIHYVKDACAFI---TQHIDELETQSHGRSRHL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ + Y GVH+E++ ARKT+P+EGAQWTGIV+++AI ML+ G+VE V+CVQS
Sbjct: 65 DNEQELYFGVHQEMVAARKTEPIEGAQWTGIVSSLAIAMLERGLVEGVICVQS------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
DR +P+PV+AR EE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 118 ---STSDRFTPQPVIARNREEILAARVNKPTLSPNLSVLEQIEQSGMKRLLAIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT C DN TR GL KFL S PETV+HYEFMQD+ VH KH
Sbjct: 175 ALRTVESKLGLEKLYVLGTPCTDNVTRSGLQKFLDTTSRSPETVVHYEFMQDFNVHFKHS 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E+VP+F L +L DV APSC +CFDYTNALAD+VVGYMG T Q+I
Sbjct: 235 DGSTEQVPFFGLNTKELKDVFAPSCMTCFDYTNALADIVVGYMGA--------TFGWQWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNE GKEML L+K+ L++ P IS GDRR V + + A DNA P ++ +
Sbjct: 287 VVRNETGKEMLELIKDQLQVQPVISQGDRRAAVQQGISAYDNA-------MTLPIWLAWI 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I+F +N VGPKGLE+ R+S+D H +RN+L+V R + KK + H+P +AK+IV Y
Sbjct: 340 ISFVVNKVGPKGLEYGRFSIDSHFVRNFLYVRRNYPKK-LEAHVPEFAKRIVAHYQ 394
>gi|414079287|ref|YP_007000711.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Anabaena sp.
90]
gi|413972566|gb|AFW96654.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Anabaena sp.
90]
Length = 397
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/415 (53%), Positives = 281/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RI+ LET H R R
Sbjct: 8 KKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIDELETTTHNRPRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 65 EDENELYFGVHQEMMSARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ARTPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 118 ---SKEDRFQPMPIIARTPEEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+ YEFMQD++VH KH
Sbjct: 175 ALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVSYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L D+ APSC SCFDY N+LAD+VVGYMG P Q+I
Sbjct: 235 DGSEETVPFFGLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAP--------YQWQWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LVK+ L P S G+R+P V +++ A D A P + L
Sbjct: 287 VVRNDTGKEMLELVKDQLHTQPVTSQGNRKPAVQQSIPAYDQAVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ +GPKGLE+AR+S+D H RNYL+V R G+K + H+P +AK+IV Y
Sbjct: 340 MGVVIDKIGPKGLEYARFSIDSHFARNYLYVKRNHGEK-LEAHVPEFAKRIVGQY 393
>gi|440684233|ref|YP_007159028.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Anabaena cylindrica PCC 7122]
gi|428681352|gb|AFZ60118.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Anabaena cylindrica PCC 7122]
Length = 397
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/420 (53%), Positives = 284/420 (67%), Gaps = 31/420 (7%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
D K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RI+ LET H R
Sbjct: 5 DSHKKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIDELETTTHNRP 61
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVIL 164
R ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 62 RNLKDENELYFGVHQEMMSARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQN---- 117
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
+DR P P++ARTP E+LAAK KPTLSPNL+ L +E +G+KRLL GVGC
Sbjct: 118 ------TKEDRFQPMPIIARTPAEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGC 171
Query: 225 QVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
Q+QALR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+ YEFMQD++VH
Sbjct: 172 QIQALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVSYEFMQDFRVHF 231
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP-KYTGISMTQH 343
KH DG E VP+F L N L D+ APSC SCFDY N+LAD+VVGYMG P K+
Sbjct: 232 KHEDGSEETVPFFGLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAPFKW-------- 283
Query: 344 PQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKF 403
Q+I VRN+ GKEML LVK+ ++ P +S GDR+P V +++ A D A P +
Sbjct: 284 -QWIVVRNDTGKEMLELVKDQIDTQPVMSKGDRKPAVQQSIPAYDQAVT-------LPMW 335
Query: 404 VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
L+ I+ +GPKGLE+AR+S+D H RNYL+V R G+K + H+P +AK+IV Y
Sbjct: 336 AAKLMGVVIDKIGPKGLEYARFSIDSHFARNYLYVKRNHGEK-LEAHVPEFAKRIVGQYK 394
>gi|332710426|ref|ZP_08430373.1| coenzyme F420-reducing hydrogenase, beta subunit [Moorea producens
3L]
gi|332350757|gb|EGJ30350.1| coenzyme F420-reducing hydrogenase, beta subunit [Moorea producens
3L]
Length = 401
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/415 (54%), Positives = 284/415 (68%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LET HGR R
Sbjct: 12 KKARALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLETKAHGRSRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D DD Y GV++++L A+K KP+EGAQWTGIV+TIA+EMLK G VE VVCVQ
Sbjct: 69 DHPDDWYFGVNQKMLTAKKIKPIEGAQWTGIVSTIAMEMLKQGKVEGVVCVQ-------- 120
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N++ +DR P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 121 -NTE-EDRFQPMPIIARTPEEVLAARVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQ 178
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALRSV++ L LEKLYVLGT CVDN REGL KFL+ S PETV+HYEFMQD+++H KH
Sbjct: 179 ALRSVQNELGLEKLYVLGTPCVDNVNREGLQKFLETTSRSPETVVHYEFMQDFRIHFKHE 238
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L DV A SC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 239 DGSIEKVPFFGLKTNQLKDVFASSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 290
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV++ LE P +S GDR+ V +++ A D P + +
Sbjct: 291 LVRNDIGQEMLDLVQDQLETQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKM 343
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL++ R +K + H+P YAK+IVE Y
Sbjct: 344 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYLKRNHPQK-LEAHVPEYAKRIVEQY 397
>gi|427731855|ref|YP_007078092.1| coenzyme F420-reducing hydrogenase subunit beta [Nostoc sp. PCC
7524]
gi|427367774|gb|AFY50495.1| coenzyme F420-reducing hydrogenase, beta subunit [Nostoc sp. PCC
7524]
Length = 397
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/415 (53%), Positives = 283/415 (68%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 QKAKALKAGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQTHTRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+
Sbjct: 65 DNPDELYFGVHQDMIAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 118 ---SKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD+++H KH
Sbjct: 175 ALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLKTNQLKDIFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LVK+ L+ P +S G+R+ V + + A D P +V L
Sbjct: 287 VVRNDTGKEMLDLVKDQLDTQPVMSEGNRKEAVQQGIPAYDKGVT-------LPMWVAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ +GPKGLE+AR+S+D H RNYL V R +G+K + H+P +AK+IV Y
Sbjct: 340 MGVVIDKIGPKGLEYARFSIDSHFTRNYLFVKRNYGEK-LEAHVPEFAKRIVGQY 393
>gi|443325346|ref|ZP_21054045.1| coenzyme F420-reducing hydrogenase, beta subunit [Xenococcus sp.
PCC 7305]
gi|442795030|gb|ELS04418.1| coenzyme F420-reducing hydrogenase, beta subunit [Xenococcus sp.
PCC 7305]
Length = 397
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/416 (52%), Positives = 282/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKTGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAALEEQAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D +D Y GVH+E++ ARK +P+EGAQWTGIV+++A ML+ G+VE VVCVQ+
Sbjct: 65 DQENDIYFGVHQEMMAARKKEPIEGAQWTGIVSSLACTMLRRGLVEGVVCVQNT------ 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ARTPEEVLAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 119 ----KEDRFQPFPIIARTPEEVLAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +REGL KFL S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEAELGLEKLYVLGTPCVDNVSREGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHQ 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E+VP+F L N L DV APSC SCFDY N+LAD+VVGYMG P Q+I
Sbjct: 235 DGSVEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADIVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEMLSL+++ ++ P +S GDR+ V +++ A D P + +
Sbjct: 287 VVRNDTGKEMLSLIQDQIDTQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKM 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL++ R +K AD H+P YA+KIVE Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYLKRNHPEKLAD-HVPDYARKIVEQYE 394
>gi|172039575|ref|YP_001806076.1| hypothetical protein cce_4662 [Cyanothece sp. ATCC 51142]
gi|354552165|ref|ZP_08971473.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
gi|171701029|gb|ACB54010.1| unknown [Cyanothece sp. ATCC 51142]
gi|353555487|gb|EHC24875.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
Length = 398
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/415 (54%), Positives = 279/415 (67%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LET+ HG+ R +
Sbjct: 9 KAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELETIAHGKSRNLE 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ ARK P+EGAQWTGIV+TIA EML+ G+VE VVCVQ+
Sbjct: 66 DENDCYFGVHQEMMAARKKDPIEGAQWTGIVSTIACEMLEKGLVEGVVCVQNT------- 118
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QA
Sbjct: 119 ---KEDRFQPMPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TREGL KFL+ S P+TV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKELGLEKLYVLGTPCVDNVTREGLQKFLETTSQSPDTVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E+VP+F L N L DV APSC SCFDY N+LADLVVGYMG Q+I
Sbjct: 236 GSVEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEMLSLV++ + P IS GDR+ V +++ A D P + L+
Sbjct: 288 VRNDTGKEMLSLVEDQINTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I VGPKGLE+AR+S+D H RNYL+V R +K D H+P YAKKIV Y
Sbjct: 341 GVVIEKVGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LDNHVPDYAKKIVSQYQ 394
>gi|428303898|ref|YP_007140723.1| coenzyme F420 hydrogenase [Crinalium epipsammum PCC 9333]
gi|428245433|gb|AFZ11213.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Crinalium epipsammum PCC 9333]
Length = 401
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/415 (53%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LE HGR R
Sbjct: 8 QKAKALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQITELEEETHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GV+++++ ARKT+P+EGAQWTGIV++IAIEML +GMVE VVCVQ+
Sbjct: 65 DNPDDWYFGVNQDMMAARKTEPIEGAQWTGIVSSIAIEMLNSGMVEGVVCVQNT------ 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 119 ----KEDRFQPMPVIARTPEEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN R GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEKKLGLEKLYVLGTPCVDNVNRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSVEMVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LVK+ LE P S GDR+ V +++ A D P + L
Sbjct: 287 VVRNDTGQEMLDLVKDQLETQPVTSKGDRKEAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNY+++ R +K D H+P YAK+IV Y
Sbjct: 340 MGVVIERIGPKGLEYARFSIDSHFTRNYIYLKRNHPEK-LDAHVPEYAKRIVGQY 393
>gi|209524048|ref|ZP_03272599.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira maxima CS-328]
gi|376004211|ref|ZP_09781958.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain
containing protein [Arthrospira sp. PCC 8005]
gi|209495423|gb|EDZ95727.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira maxima CS-328]
gi|375327417|emb|CCE17711.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain
containing protein [Arthrospira sp. PCC 8005]
Length = 400
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/415 (53%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQGIVEGVVCVQN------- 120
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P+LARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+Q
Sbjct: 121 ---TKEDRFGPMPILARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQ 177
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE + LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 178 ALRAVEKQMGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHE 237
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 238 DGSTETVPFFGLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 289
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+EML L+++ L+ P S GDRR V +++ A D A P + +
Sbjct: 290 VVRNDRGQEMLDLIQDQLDTQPVSSQGDRRAAVQQSIPAYDKAVT-------IPMWAAKM 342
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 343 MGVVIERIGPKGLEYARFSIDSHYTRNYLYVKRNYPEK-LENHVPDFAKRIVAQY 396
>gi|409991447|ref|ZP_11274708.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Arthrospira platensis str.
Paraca]
gi|291566576|dbj|BAI88848.1| 3,8-divinyl protochlorophyllide/chlorophyllide reductase
[Arthrospira platensis NIES-39]
gi|409937698|gb|EKN79101.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Arthrospira platensis str.
Paraca]
Length = 400
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/415 (53%), Positives = 279/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQGIVEGVVCVQNT------ 121
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PVLARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+Q
Sbjct: 122 ----KEDRFGPMPVLARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQ 177
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE + LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 178 ALRAVEKQMGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHE 237
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 238 DGSTETVPFFGLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 289
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+EML L+++ L+ P S GDR V +++ A D A P + +
Sbjct: 290 VVRNDRGQEMLDLIQDQLDTQPVSSKGDRHQAVQQSIPAYDKAVT-------IPMWAAKM 342
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R + +K D H+P +AK+IV Y
Sbjct: 343 MGVVIERIGPKGLEYARFSIDSHYTRNYLYVKRNYPEK-LDNHVPDFAKRIVAQY 396
>gi|428775162|ref|YP_007166949.1| coenzyme F420 hydrogenase [Halothece sp. PCC 7418]
gi|428689441|gb|AFZ42735.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halothece sp. PCC 7418]
Length = 398
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/416 (54%), Positives = 280/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAK CS CGLCDTYYI +VK+ACAFL + +I LE HG+ R
Sbjct: 8 RKAKALKAGSPRPAKALCSECGLCDTYYIHYVKEACAFLHE---QIADLEAQAHGQSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ DD Y GVH+E++ ARK +P+EGAQWTGIV+ IA EML+ G VE VVCVQ+
Sbjct: 65 EKEDDLYFGVHQEMMAARKKEPIEGAQWTGIVSAIACEMLQQGKVEGVVCVQNT------ 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G KRLL GVGCQ+Q
Sbjct: 119 ----PEDRFQPMPIIARTPEEVLAARVNKPTLSPNLSILEEVEQSGFKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L LEKLYVLGT CVDN TREGL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVQDKLGLEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L +L DV APSC SCFDY N+LADLVVGYMG P G Q+I
Sbjct: 235 DGSIEKVPFFGLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAP--FGY------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV++ LE S G+R+ V +++ A D P + L
Sbjct: 287 VVRNDIGKEMLDLVQDQLETQAVSSKGNRKAAVQQSIPAYDQGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I VGPKGLE+AR+S+D H RNYL+V R + +K D H+P YAK+IVE Y
Sbjct: 340 MGVVIEQVGPKGLEYARFSIDSHFTRNYLYVKRNYPEK-LDDHVPEYAKRIVEQYE 394
>gi|428206145|ref|YP_007090498.1| coenzyme F420 hydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428008066|gb|AFY86629.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 398
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/415 (53%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTYYI +VK+ACAFL + + LET H R R
Sbjct: 9 KKAKALKSGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQFDQLETQTHDRSRNL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH+ + ARK +P+ GAQWTGIV+TIAIEML G+VE VVCVQ+
Sbjct: 66 DNPDELYFGVHQSMTAARKKEPIPGAQWTGIVSTIAIEMLNRGIVEGVVCVQN------- 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 119 ---TKEDRFQPMPIIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 175
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH
Sbjct: 176 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFRVHFKHE 235
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E VP+F L N L DV APSC SCFDY N+LADLVVGYMG T Q+I
Sbjct: 236 DGSVETVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGA--------TFGWQWI 287
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+EML LV++ LE+ P IS GDR V +++ A D A P + L
Sbjct: 288 VVRNDRGREMLDLVQDKLELQPVISQGDRHQAVQQSIPAYDKAVT-------LPMWAAKL 340
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 341 MGVVIERIGPKGLEYARFSIDSHFTRNYLYVKRNYLEK-LEAHVPEFAKRIVGQY 394
>gi|428223919|ref|YP_007108016.1| coenzyme F420 hydrogenase [Geitlerinema sp. PCC 7407]
gi|427983820|gb|AFY64964.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Geitlerinema sp. PCC 7407]
Length = 398
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/416 (53%), Positives = 282/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R
Sbjct: 8 KKAKALKSSSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ DD Y GVH+ ++ ARK +P+EGAQWTGIV+++AIEML G VE VVCVQ
Sbjct: 65 EQWDDCYFGVHQTMMAARKQQPIEGAQWTGIVSSLAIEMLNRGWVEGVVCVQ-------- 116
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N++ DR P+PV+ARTPEE+LAA+ KPTLSPNL+ L LVE +G+K+LL GVGCQ+Q
Sbjct: 117 -NTE-SDRFGPQPVIARTPEEILAARVNKPTLSPNLSVLELVEQSGLKKLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L LEKLYVLGT CVDN +R+GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVQDKLGLEKLYVLGTPCVDNVSRDGLQKFLETTSRSPETVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+EML LV + LE P +S GDRR V +++ A + P + L
Sbjct: 287 VVRNDRGQEMLDLVMDQLETQPVMSKGDRRAAVQQSIPAYEKGVT-------LPMWAAQL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R +K AD H+P YA++IV Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVQRNHPEKLAD-HVPDYAQRIVGQYQ 394
>gi|282898594|ref|ZP_06306582.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cylindrospermopsis raciborskii CS-505]
gi|281196462|gb|EFA71371.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cylindrospermopsis raciborskii CS-505]
Length = 401
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/417 (54%), Positives = 283/417 (67%), Gaps = 31/417 (7%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+SK + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RIE LE H R R
Sbjct: 10 KKSKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIEELEVNTHQRCRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D ++ Y GVH+E++ ARK P+ GAQWTGIV+TIAIEML G+VE VVCVQ
Sbjct: 67 DKENELYFGVHQEMMAARKQVPIVGAQWTGIVSTIAIEMLNRGLVEGVVCVQ-------- 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
NS +DR P P++ARTPE +LAAK KPTLSPNL+ L +E +G+K+LL GVGCQ+Q
Sbjct: 119 -NSQ-EDRFQPMPIIARTPEAILAAKVNKPTLSPNLSVLEEIEQSGMKKLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P TV+ YEFMQD++VH KH
Sbjct: 177 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPGTVVSYEFMQDFRVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QY 346
DG E+VP+F L N L D+ APSC SCFDY N+LADLVVGYMG P +P Q+
Sbjct: 237 DGSEEKVPFFGLKTNILKDIFAPSCMSCFDYVNSLADLVVGYMGAP---------YPWQW 287
Query: 347 ITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGN 406
I VRN+ GK+ML LVK LEI P +S G+R+P V + +KA D+A P +V
Sbjct: 288 IVVRNDTGKQMLDLVKEQLEIQPVMSQGNRQPAVQQGIKAYDDAVT-------LPMWVAQ 340
Query: 407 LIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
L+ I+ +GPKGLE+ ++S+D H RNYL+V R +K + H+P +AK+IV YN
Sbjct: 341 LMGIVIDRIGPKGLEYGKFSIDSHFARNYLYVKRHHPQK-LEAHVPEFAKRIVAQYN 396
>gi|427736999|ref|YP_007056543.1| coenzyme F420-reducing hydrogenase subunit beta [Rivularia sp. PCC
7116]
gi|427372040|gb|AFY55996.1| coenzyme F420-reducing hydrogenase, beta subunit [Rivularia sp. PCC
7116]
Length = 397
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/415 (53%), Positives = 278/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYY+ +VK+ACAFL +I LE H R R
Sbjct: 8 KKAKALKPGSPRPAKELCSECGLCDTYYVHYVKEACAFLN---QQIAELEEQSHSRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GV +E++ ARK +P+ GAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 65 DNADELYFGVQQEMMAARKKEPIPGAQWTGIVSSIAIEMLNRGIVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEEVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 118 ---TQEDRFQPMPVIARTPEEVLAAKVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LAD+VVGYMG P Q+I
Sbjct: 235 DGSTETVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADIVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNERGKEML LVK+ +++ +S G+R+ V +++ A D P + L
Sbjct: 287 VVRNERGKEMLDLVKDQIDVQEVMSQGNRQAAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+ R +K D H+P +AK+IVE Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYTKRNHPEK-LDNHVPEFAKRIVEQY 393
>gi|428314173|ref|YP_007125150.1| coenzyme F420-reducing hydrogenase subunit beta [Microcoleus sp.
PCC 7113]
gi|428255785|gb|AFZ21744.1| coenzyme F420-reducing hydrogenase, beta subunit [Microcoleus sp.
PCC 7113]
Length = 402
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/403 (55%), Positives = 274/403 (67%), Gaps = 29/403 (7%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R D+ DD Y GV++
Sbjct: 24 PAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELEEEAHGRSRHLDNPDDWYFGVNQ 80
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
++ ARKT+P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR P
Sbjct: 81 NMMAARKTEPIEGAQWTGIVSTIAIEMLNRGIVEGVVCVQN----------TKEDRFQPM 130
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L LE
Sbjct: 131 PIIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLGLE 190
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
KLYVLGT CVDN TR+GL KFL S PETV+HYEFMQD++VH KH DG E VP+F L
Sbjct: 191 KLYVLGTPCVDNVTRDGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFFGL 250
Query: 300 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EML
Sbjct: 251 KTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEMLD 302
Query: 360 LVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKG 419
LV+N LE P +S GDRR V +++ A D P + L+ I +GP+G
Sbjct: 303 LVQNQLETQPVMSKGDRRNAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGPQG 355
Query: 420 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
LE+AR+S+D H RNYL+V R +K ++H+P YAK+IV Y
Sbjct: 356 LEYARFSIDSHFTRNYLYVKRNHPEK-LEEHVPEYAKRIVGQY 397
>gi|218246210|ref|YP_002371581.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 8801]
gi|257059259|ref|YP_003137147.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 8802]
gi|218166688|gb|ACK65425.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 8801]
gi|256589425|gb|ACV00312.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 8802]
Length = 401
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/415 (53%), Positives = 278/415 (66%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL +S LE + HGR R D
Sbjct: 12 KAKGLKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLNQQISE---LEEIAHGRSRNLD 68
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GV++++ ARK +P+EGAQWTGIV+ IA EML G+VE VVCVQ+
Sbjct: 69 DENDWYFGVYQQMTAARKKQPIEGAQWTGIVSAIACEMLTQGLVEGVVCVQN-------- 120
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
P+DR P P++A+T EE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QA
Sbjct: 121 --TPEDRFQPMPIIAKTTEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQA 178
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLY+LGT CVDN TREGL FL+ S PETV+HYEFMQD++VH KH D
Sbjct: 179 LRAVEKKLGLEKLYILGTPCVDNVTREGLQTFLQTTSKSPETVIHYEFMQDFRVHFKHED 238
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG Q+I
Sbjct: 239 GSIEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIM 290
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRNE G+EML+LV+ ++ P IS GDR+ V +++ A D P + L+
Sbjct: 291 VRNETGREMLALVEEQIDTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLM 343
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I +GPKGLE+AR+S+D H RNYL++ R +K AD H+P YAK+IV Y
Sbjct: 344 GVVIEKIGPKGLEYARFSIDSHFTRNYLYLKRNHPEKLAD-HVPEYAKRIVNQYQ 397
>gi|427717858|ref|YP_007065852.1| coenzyme F420 hydrogenase [Calothrix sp. PCC 7507]
gi|427350294|gb|AFY33018.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Calothrix sp. PCC 7507]
Length = 402
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/415 (53%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK ACAF+ +I LET H R R
Sbjct: 12 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKSACAFIN---QQIGELETQTHTRPRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 69 DNPDELYFGVHQDMMAARKQEPIEGAQWTGIVSSIAIEMLNRGIVEGVVCVQN------- 121
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 122 ---TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 178
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH
Sbjct: 179 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHE 238
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 239 DGSTETVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 290
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LVK+ ++ P +S G+R+ V +++ A D P + L
Sbjct: 291 VVRNDTGKEMLDLVKDQIDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKL 343
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R +G+K + H+P +AK+IV Y
Sbjct: 344 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYGEK-LEAHVPEFAKRIVGQY 397
>gi|427711257|ref|YP_007059881.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
PCC 6312]
gi|427375386|gb|AFY59338.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
PCC 6312]
Length = 404
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/415 (53%), Positives = 277/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K I PAK+ CS CGLCDTYYI +VK+ACAF+ + + LET HGR R
Sbjct: 14 KKAKAIAANSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQFDTLETQTHGRSRDL 70
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH+E++ ARKT P+ GAQWTGIV++IAI ML G VE VVCVQ+
Sbjct: 71 DNWDECYFGVHQEMITARKTDPIPGAQWTGIVSSIAIAMLNQGWVEGVVCVQN------- 123
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR PRP++ARTP E+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 124 ---TPEDRFQPRPIIARTPAEILAARVNKPTLSPNLSVLEEIEKSGLKRLLVIGVGCQIQ 180
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL S P+TV++YEFMQD++VH KH
Sbjct: 181 ALRAVEDKLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPDTVIYYEFMQDFRVHFKHE 240
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L +L DV APSC SCFDY N LADLVVGYMG P Q+I
Sbjct: 241 DGSTETVPFFGLNTKELKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWI 292
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
TVRN+ G+EMLSLV++ LE P IS G+R+ V +++ A D P + L
Sbjct: 293 TVRNQTGREMLSLVQDQLETQPMISQGNRQAAVQQSIPAYDKGVT-------LPMWAAKL 345
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I VGPKGLE+AR+S+D H RNYL+ R + K A H+P +AKKIV+ Y
Sbjct: 346 MGVVIEKVGPKGLEYARFSIDSHFTRNYLYTLRNYPSKLA-AHVPEFAKKIVDQY 399
>gi|254412391|ref|ZP_05026165.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180701|gb|EDX75691.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/408 (54%), Positives = 275/408 (67%), Gaps = 29/408 (7%)
Query: 55 PGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTY 114
PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LET HGR R D+ DD Y
Sbjct: 32 PGTIRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIPELETQTHGRSRNLDNPDDWY 88
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
GV++ ++ ARK +P+EGAQWTGIV+TIAIEML +G VE VVCVQ+ +D
Sbjct: 89 FGVNQNMMAARKLQPIEGAQWTGIVSTIAIEMLTSGKVEGVVCVQN----------TKED 138
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 234
R P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE
Sbjct: 139 RFQPMPIIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEK 198
Query: 235 HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 294
L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG IE+V
Sbjct: 199 ELGLEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFQVHFKHEDGSIEKV 258
Query: 295 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 354
P+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG
Sbjct: 259 PFFGLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRG 310
Query: 355 KEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 414
+EML LV+N LE S GDR V +++ A D P + L+ I
Sbjct: 311 QEMLDLVQNQLETQSVTSKGDRHQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEK 363
Query: 415 VGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+GPKGLE+AR+S+D H RNYL+V R +K A H+P +AK+IV Y
Sbjct: 364 IGPKGLEYARFSIDSHFTRNYLYVKRHHPEKLA-AHIPEFAKRIVGQY 410
>gi|428768872|ref|YP_007160662.1| coenzyme F420 hydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683151|gb|AFZ52618.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanobacterium aponinum PCC 10605]
Length = 397
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/415 (53%), Positives = 279/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAKD CS CGLCDTYYI +VK+ACAF+ +I LET+ HGR R
Sbjct: 8 RKAKALKQGSRRPAKDLCSECGLCDTYYIHYVKEACAFIN---QQITELETIAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ +D Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML G+VE VVCVQ
Sbjct: 65 NNENDLYFGVHQEMMSAKKIEPIEGAQWTGIVSTIACEMLTQGLVEGVVCVQ-------- 116
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
NSD +DR P+P++A T EE+L AK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 117 -NSD-EDRFQPKPIIATTTEEILGAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+ YEFMQD++VH KH
Sbjct: 175 ALRAVEDKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVAYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E+VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSVEKVPFFGLKTNQLKDVFAPSCMTCFDYVNSLADLVVGYMGAPF--------GWQWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LVKN L P IS GDR V ++ A D P + L
Sbjct: 287 VVRNDIGREMLDLVKNQLHTQPVISRGDRTQAVQNSIPAYDQGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I VGPKGLE+AR+S+D H RNYL+V R + +K D H+P YA+KIV Y
Sbjct: 340 MGVVIEKVGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLKD-HVPEYAEKIVSQY 393
>gi|428780667|ref|YP_007172453.1| coenzyme F420-reducing hydrogenase subunit beta [Dactylococcopsis
salina PCC 8305]
gi|428694946|gb|AFZ51096.1| coenzyme F420-reducing hydrogenase, beta subunit [Dactylococcopsis
salina PCC 8305]
Length = 398
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/416 (53%), Positives = 278/416 (66%), Gaps = 31/416 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK CS CGLCDT+YI +VK+ACAFL + +I LE HG+ R
Sbjct: 9 KAKGLKPNSPRPAKALCSECGLCDTHYIHYVKEACAFLNE---QIAALEAEAHGKSRDLT 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
DD Y GVH+E++ AR +P+EGAQWTGIV++IA EML G VE VVCVQ+
Sbjct: 66 QEDDLYFGVHQEMMAARNKEPIEGAQWTGIVSSIACEMLTQGKVEGVVCVQN-------- 117
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
PDDR P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G KRLL GVGCQ+QA
Sbjct: 118 --HPDDRFQPMPIIARTPEEVLAARVNKPTLSPNLSILEQVEQSGFKRLLAIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LRSV+ + LEKLYVLGT CVDN TREGL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRSVQDKIGLEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP-KYTGISMTQHPQYI 347
G IE+VP+F L L DV APSC SCFDY N+LADLVVGYMG P +Y Q++
Sbjct: 236 GSIEKVPFFGLNTKKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFQY---------QWL 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML+LV + LE P S G+R+ V +++ A D P + L
Sbjct: 287 VVRNDIGKEMLNLVADQLETQPVSSQGNRKAAVQQSIPAYDQGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R + +K D H+P +AK+IVE Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLED-HVPEFAKRIVEQYE 394
>gi|427706065|ref|YP_007048442.1| coenzyme F420 hydrogenase [Nostoc sp. PCC 7107]
gi|427358570|gb|AFY41292.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nostoc sp. PCC 7107]
Length = 397
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/415 (52%), Positives = 282/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIDTLEAQAHSRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+
Sbjct: 65 DNPEELYFGVHQDMMAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 118 ---TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD+++H KH
Sbjct: 175 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRIHFKHS 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LVK+ ++ P +S G+R+ V + + A D P +V +
Sbjct: 287 VVRNDTGKEMLDLVKDQIDTQPVMSQGNRQEAVQQGIPAYDKGVT-------LPMWVAKM 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 340 MGVVIDKIGPKGLEYARFSIDSHFTRNYLYVKRNHHEK-LEAHVPEFAKRIVGQY 393
>gi|126655028|ref|ZP_01726467.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cyanothece sp. CCY0110]
gi|126622507|gb|EAZ93212.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cyanothece sp. CCY0110]
Length = 398
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/415 (53%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET+ HG+ R +
Sbjct: 9 KAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIAELETIAHGKSRNLE 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ ARK +P+EGAQWTGIV++IA EML G+VE VVCVQ+
Sbjct: 66 DENDCYFGVHQEMMAARKKEPIEGAQWTGIVSSIACEMLDKGIVEGVVCVQN-------- 117
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P PV+ART EEVLAA+ KPTLSPNL+ L ++ + +KRLL GVGCQ+QA
Sbjct: 118 --TKEDRFQPMPVIARTSEEVLAARVNKPTLSPNLSILEQIKESNLKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L L+KLYVLGT CVDN TREGL KFL+ S P+TV+HYEFMQD++VH KH D
Sbjct: 176 LRTVEKELGLKKLYVLGTPCVDNVTREGLQKFLETTSQSPDTVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG Q+I
Sbjct: 236 GSIEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN++GKEM +LV++ + P IS GDR+ V +++ A D P + L+
Sbjct: 288 VRNDKGKEMFALVEDQINTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I VGPKGLE+AR+S+D H RNYL+V R +K D H+P+YAKKIV Y
Sbjct: 341 GVVIERVGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LDNHVPNYAKKIVSQYQ 394
>gi|282898451|ref|ZP_06306441.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Raphidiopsis brookii D9]
gi|281196617|gb|EFA71523.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Raphidiopsis brookii D9]
Length = 401
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/420 (54%), Positives = 282/420 (67%), Gaps = 31/420 (7%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+SK + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RIE LE H R R
Sbjct: 10 KKSKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIEELEVNTHQRCRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D ++ Y GVH+E++ ARK P+ GAQWTGIV+TIAIEML G+VE VVCVQ
Sbjct: 67 DKENELYFGVHQEMMAARKQVPIVGAQWTGIVSTIAIEMLNCGLVEGVVCVQ-------- 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
NS +DR P P++ARTPE +LAAK KPTLSPNL+ L +E +G+K+LL GVGCQ+Q
Sbjct: 119 -NSQ-EDRFQPMPIIARTPEAILAAKVNKPTLSPNLSVLEEIEQSGMKKLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P TV+ YEFMQD++VH KH
Sbjct: 177 ALRAVEKQLGLEKLYVLGTPCVDNVTRTGLQKFLETTSHSPGTVVSYEFMQDFRVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QY 346
DG E+VP+F L N L D+ APSC SCFDY N+LADLVVGYMG P +P Q+
Sbjct: 237 DGSEEKVPFFGLKTNILKDIFAPSCMSCFDYVNSLADLVVGYMGAP---------YPWQW 287
Query: 347 ITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGN 406
I VRN GKEML LVK LEI P +S G+R+P V + +KA D+A P +V
Sbjct: 288 IVVRNNTGKEMLDLVKEQLEIQPVMSQGNRQPAVQQGIKAYDDAVT-------LPMWVAQ 340
Query: 407 LIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNG 466
L+ I+ +GPKGLE+ ++S+D H RNYL+V R K + H+P +AK+IV Y+ G
Sbjct: 341 LMGIVIDRIGPKGLEYGKFSIDSHFARNYLYVKRHHPHK-LEAHVPEFAKRIVAQYDLPG 399
>gi|298492095|ref|YP_003722272.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein ['Nostoc azollae' 0708]
gi|298234013|gb|ADI65149.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
['Nostoc azollae' 0708]
Length = 399
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/417 (52%), Positives = 281/417 (67%), Gaps = 31/417 (7%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LET H R R
Sbjct: 10 KKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQKIDQLETTTHNRPRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 67 EDENELYFGVHQEMMSARKLQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQN------- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 120 ---TKEDRFQPMPIIARTTEEILAAKVNKPTLSPNLSVLEQIEESGMKRLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR++E L LEKLYVLGT CVDN TR GL KFL+ S P TV+ YEFMQD++VH KH
Sbjct: 177 ALRAIEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPATVVSYEFMQDFRVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QY 346
DG E VP+F L N L D+ APSC SCFDY N+LAD+VVGYMG P P Q+
Sbjct: 237 DGSEETVPFFGLKTNILKDIFAPSCMSCFDYVNSLADIVVGYMGAP---------FPWQW 287
Query: 347 ITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGN 406
I VRN+ G+EML LVK+ LE P + GDR+P V + ++A D A P +V
Sbjct: 288 ILVRNDTGQEMLELVKDQLETQPVMFQGDRKPAVQQGIEAYDKAVT-------LPMWVAK 340
Query: 407 LIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
L+ I+ +GPKGLE+ R+S+D H RNYL+V R +K + H+P +A++IV YN
Sbjct: 341 LMGVVIDKIGPKGLEYGRFSIDSHFARNYLYVKRNHPEK-LEAHLPEFARRIVGQYN 396
>gi|17229093|ref|NP_485641.1| hypothetical protein all1601 [Nostoc sp. PCC 7120]
gi|20141923|sp|P46015.2|Y1601_ANASP RecName: Full=Uncharacterized protein all1601
gi|17135421|dbj|BAB77967.1| all1601 [Nostoc sp. PCC 7120]
Length = 397
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/415 (52%), Positives = 280/415 (67%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 QKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQAHQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH++++ A+K +P+ GAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 65 DNPDELYFGVHQDMIAAKKQQPIAGAQWTGIVSSIAIEMLNHGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 118 ---SKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD+++H KH
Sbjct: 175 ALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV+N L+ P +S G+R+ V + + A D P +V +
Sbjct: 287 LVRNDTGKEMLDLVQNQLDTQPVMSEGNRQEAVQQGISAYDKGVT-------LPMWVAKI 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ +GPKGLE+AR+S+D H RNYL V R +K A H+P +AK+IV Y
Sbjct: 340 MGVVIDKIGPKGLEYARFSIDSHFTRNYLFVKRNHPEKLA-AHVPEFAKRIVGQY 393
>gi|443669256|ref|ZP_21134490.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunitfamily protein
[Microcystis aeruginosa DIANCHI905]
gi|159027297|emb|CAO86839.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330451|gb|ELS45165.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunitfamily protein
[Microcystis aeruginosa DIANCHI905]
Length = 397
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/414 (53%), Positives = 279/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VKDACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKDACAFL---HQQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTIEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A+ H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLAN-HVPEYAKKIVEQY 393
>gi|186685427|ref|YP_001868623.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Nostoc
punctiforme PCC 73102]
gi|186467879|gb|ACC83680.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nostoc punctiforme PCC 73102]
Length = 397
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/415 (52%), Positives = 277/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LE H R R
Sbjct: 8 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGELEVETHTRSRHL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 65 DNPDELYFGVHQDMIAARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 118 ---TKEDRFQPMPIIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN R GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEKQLGLEKLYVLGTPCVDNVNRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSSETVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV++ L+ P S G+R+ V +++ A D P + L
Sbjct: 287 VVRNDTGKEMLDLVQDQLDTQPVTSKGNRKEAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IVE Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVEQY 393
>gi|425452531|ref|ZP_18832348.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765618|emb|CCI08525.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 397
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/414 (53%), Positives = 278/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|220907665|ref|YP_002482976.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864276|gb|ACL44615.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7425]
Length = 402
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/415 (53%), Positives = 273/415 (65%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + PAK+ CS CGLCDTYYI +VK ACAFL + + LE+ H R R
Sbjct: 13 KKARALKSSSRRPAKELCSECGLCDTYYIHYVKTACAFLN---QQFDQLESQTHDRPRNL 69
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ Y GVH+E++ ARKT+P+ GAQWTGIV+TIAIEML G+VE VVCVQ+
Sbjct: 70 ADDNELYFGVHQEMMAARKTEPIPGAQWTGIVSTIAIEMLSRGLVEGVVCVQNTA----- 124
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P+PV+ARTP E+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 -----EDRFQPKPVIARTPAEILAARVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQ 179
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALRSVE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH
Sbjct: 180 ALRSVEQQLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVHYEFMQDFRVHFKHE 239
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N LADLVVGYMG P Q++
Sbjct: 240 DGSEETVPFFGLKTNQLKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWL 291
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+EML LVK+ LE P +S GDRR V +++ A D P + L
Sbjct: 292 VVRNDRGREMLELVKDQLETQPVMSQGDRRAAVQQSIPAYDKGVT-------LPMWAAKL 344
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL V R + K H+P +AK+IV Y
Sbjct: 345 MGVVIEKIGPKGLEYARFSIDSHFTRNYLFVKRNYRDKLV-AHVPEFAKRIVNQY 398
>gi|425442236|ref|ZP_18822491.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716834|emb|CCH98976.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 397
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 279/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSMEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L+ +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|119487009|ref|ZP_01620881.1| hypothetical protein L8106_18871 [Lyngbya sp. PCC 8106]
gi|119455938|gb|EAW37072.1| hypothetical protein L8106_18871 [Lyngbya sp. PCC 8106]
Length = 400
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/416 (52%), Positives = 278/416 (66%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYY+ +V++ACAF+ +I LET HG+ R
Sbjct: 11 RKAKALKPGSRRPAKELCSECGLCDTYYVHYVREACAFIN---QQITQLETQTHGQSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ DD Y GVH+ ++ ARK +P+EGAQWTGIV++IA EML G+VE VVCVQ+
Sbjct: 68 ENDDDLYFGVHQTMMAARKKQPIEGAQWTGIVSSIACEMLTQGIVEGVVCVQN------- 120
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 121 ---TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQ 177
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 178 ALRAVEKELGLEKLYVLGTPCVDNVTRAGLQKFLETTSKSPETVVHYEFMQDFRVHFKHE 237
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L +L D+ APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 238 DGSIEKVPFFGLNTKELKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 289
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV L+ P S G R+P V +++ A D P + L
Sbjct: 290 VVRNDTGKEMLDLVSGQLDTQPVHSEGKRQPAVQQSIPAYDKGVT-------LPMWAAKL 342
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 343 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVGQYE 397
>gi|166366747|ref|YP_001659020.1| coenzyme F420 hydrogenase subunit beta [Microcystis aeruginosa
NIES-843]
gi|166089120|dbj|BAG03828.1| coenzyme F420 hydrogenase subunit beta [Microcystis aeruginosa
NIES-843]
Length = 397
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 276/414 (66%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L+ +SSGDR+ V ++ A D P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLDTQDVMSSGDRKQAVQNSIPAYDKGVT-------LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|434391958|ref|YP_007126905.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Gloeocapsa sp. PCC 7428]
gi|428263799|gb|AFZ29745.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Gloeocapsa sp. PCC 7428]
Length = 401
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/408 (53%), Positives = 274/408 (67%), Gaps = 29/408 (7%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK+ CS CGLCDTYYI +VK+ACAFL +I LET H R R D+ D+ Y GVH+
Sbjct: 23 PAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELETRSHTRARNLDNSDELYFGVHQ 79
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
+++ ARKT+P+ GAQWTGIV++IAI ML G+VE VVCVQ+ +DR P
Sbjct: 80 DMMAARKTEPILGAQWTGIVSSIAIAMLNRGVVEGVVCVQN----------TKEDRFQPM 129
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P++ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L LE
Sbjct: 130 PIIARTPEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKQLGLE 189
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
KLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F L
Sbjct: 190 KLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSEETVPFFGL 249
Query: 300 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EML
Sbjct: 250 KTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEMLD 301
Query: 360 LVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKG 419
LV++ LE P +S GDR V +++ A D P + L+ I +GPKG
Sbjct: 302 LVQDQLETQPVMSKGDRTAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPKG 354
Query: 420 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
LE+AR+S+D H RNYL+V R + +K A H+P +AK+IV Y Q
Sbjct: 355 LEYARFSIDSHFTRNYLYVKRHYPEKLA-AHVPEFAKRIVNQYKLPSQ 401
>gi|390438179|ref|ZP_10226671.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389838407|emb|CCI30795.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 397
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 279/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH +
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEN 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L+ +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425447724|ref|ZP_18827707.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389731640|emb|CCI04319.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 397
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 278/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLARGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425465794|ref|ZP_18845101.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389831913|emb|CCI24943.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 397
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 279/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSMEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L+ +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425457410|ref|ZP_18837113.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801237|emb|CCI19572.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 397
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 278/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425438251|ref|ZP_18818656.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676634|emb|CCH94392.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 397
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 277/414 (66%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN GKEML LVK+ L +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNNTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425460813|ref|ZP_18840294.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826458|emb|CCI23007.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 397
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 278/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSMEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425468516|ref|ZP_18847529.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389884813|emb|CCI34912.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 397
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 278/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKSNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIM 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK+ L+ +SSGDR+ V ++ A D +G + P + ++
Sbjct: 288 VRNDTGKEMLELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|411116284|ref|ZP_11388772.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoriales
cyanobacterium JSC-12]
gi|410713775|gb|EKQ71275.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoriales
cyanobacterium JSC-12]
Length = 403
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/421 (52%), Positives = 276/421 (65%), Gaps = 29/421 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL I LE HGR R
Sbjct: 12 KKARALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFL---TQHIAELEIEAHGRSRDL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+S DD Y GVH++++ ARK P+ GAQWTGIV++IAI+ML GMVE VVCVQ
Sbjct: 69 ESQDDWYFGVHQDMMAARKKDPIPGAQWTGIVSSIAIQMLTRGMVEGVVCVQ-------- 120
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N++ +DR P+PV+ART +E+LAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+Q
Sbjct: 121 -NTE-EDRFQPKPVIARTTDEILAARVNKPTLSPNLSVLEQIEQSNMKRLLVIGVGCQIQ 178
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL S P TV+HYEFMQD++VH KH
Sbjct: 179 ALRTVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPSTVIHYEFMQDFRVHFKHE 238
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 239 DGSTEMVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 290
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+EML LV++ + P +S GDR+ V ++ A D P + L
Sbjct: 291 VVRNDRGQEMLDLVRDQIATQPVMSQGDRKQAVQNSIPAYDKGVT-------LPMWAAKL 343
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
+ I VGPKGLE+AR+S+D H RNYL+V R +K + H+P YAK+IV Y G+
Sbjct: 344 MGVVIERVGPKGLEYARFSIDSHFTRNYLYVKRHHPEK-LESHVPEYAKRIVSQYKLPGR 402
Query: 468 I 468
Sbjct: 403 F 403
>gi|422301428|ref|ZP_16388796.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790684|emb|CCI13466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 397
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 275/414 (66%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLH---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTA------ 119
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 120 ----EDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQA 175
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH D
Sbjct: 176 LRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHED 235
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 236 GSIEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIV 287
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LVK L+ +SSGDR+ V ++ A D P + ++
Sbjct: 288 VRNDTGKEMLELVKAQLDTQDVMSSGDRKQAVQNSIPAYDKGVT-------LPMWAAKMM 340
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 341 GVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|75910412|ref|YP_324708.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Anabaena variabilis ATCC 29413]
gi|75704137|gb|ABA23813.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Anabaena variabilis ATCC 29413]
Length = 397
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/415 (52%), Positives = 277/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 KKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQAHQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D D+ Y GVH++++ ARK +P+ GAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 65 DHPDELYFGVHQDMIAARKQQPIPGAQWTGIVSSIAIEMLNRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 118 ---SKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD+++H H
Sbjct: 175 ALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVHYEFMQDFRIHFTHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSIEKVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN GKEML LV++ L+ P +S G+R+ V + + A D P +V +
Sbjct: 287 LVRNNTGKEMLDLVQDQLDTQPVMSQGNRQEAVQQGISAYDKGVT-------LPMWVAKM 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ +GPKGLE+AR+S+D H RNYL V R +K + H+P +AK+IV Y
Sbjct: 340 MGVVIDKIGPKGLEYARFSIDSHFTRNYLFVKRNHPEK-LEAHVPEFAKRIVGQY 393
>gi|443315201|ref|ZP_21044705.1| coenzyme F420-reducing hydrogenase, beta subunit [Leptolyngbya sp.
PCC 6406]
gi|442785212|gb|ELR95048.1| coenzyme F420-reducing hydrogenase, beta subunit [Leptolyngbya sp.
PCC 6406]
Length = 400
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/416 (53%), Positives = 276/416 (66%), Gaps = 30/416 (7%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAKD CS CGLCDTYYI +VKDACAFL + LET HGR R
Sbjct: 9 QKAKALRPGARRPAKDLCSECGLCDTYYIHYVKDACAFLN---QQFPTLETQTHGRSRDL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+S DD Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ
Sbjct: 66 ESEDDCYFGVHQDMMAARKQEPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQ-------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N+D DR P P++ARTPEE+LAA+ KPTLSPNL+ L V +G+KRLL GVGCQ+Q
Sbjct: 118 -NTD-RDRFQPMPIIARTPEEILAARVNKPTLSPNLSVLEQVAQSGMKRLLVIGVGCQIQ 175
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LE+LYVLGT CVDN TR GL KFL S PETV+HYEFMQD++VH KH
Sbjct: 176 ALRAVESQLGLEQLYVLGTPCVDNVTRAGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHE 235
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L +L DV APSC SCFDY N LADLVVGYMG P Q+I
Sbjct: 236 DGSTETVPFFGLNTRELKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWI 287
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+ ML V + L+ P S G+R V +++ A D P + L
Sbjct: 288 VVRNDRGQAMLETVMDQLDTQPVASQGNRVDAVQQSIAAYDKGVT-------LPMWAAKL 340
Query: 408 IAFFIN-LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ ++GPKGLE+AR+S+D H RNYL+ R + +K A H+P +AK+IV Y
Sbjct: 341 LGIVIDKVLGPKGLEYARFSIDSHFTRNYLYTRRNYPEKLA-AHVPEFAKRIVSRY 395
>gi|428215878|ref|YP_007089022.1| coenzyme F420-reducing hydrogenase subunit beta [Oscillatoria
acuminata PCC 6304]
gi|428004259|gb|AFY85102.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoria
acuminata PCC 6304]
Length = 401
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/416 (52%), Positives = 274/416 (65%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG R
Sbjct: 11 QKSKALKPGSRPPAKELCSECGLCDTYYIHYVKEACAFLNQ---QIATLEESAHGLSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ D+ Y GVH+ ++ ARK +P+ GAQWTGIV+TIA ML G+VE VVCVQ+
Sbjct: 68 ENPDELYFGVHQHMMAARKQEPIAGAQWTGIVSTIACSMLDRGLVEGVVCVQN------- 120
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR P P+LART EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 121 ---TPEDRFGPMPILARTKAEVLAAKVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQ 177
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALRSV+ L LEKLYVLGT CVDN +REGL KFL+ S PETV+HYEFMQD+++H KH
Sbjct: 178 ALRSVQKELGLEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRIHFKHE 237
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE+VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 238 DGSIEKVPFFGLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPYGW--------QWI 289
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV LE P +S GDR V +++ A + P + L
Sbjct: 290 VVRNQTGQEMLDLVTEQLETQPVMSRGDRHAAVQQSIPAYEKGVT-------LPMWAAKL 342
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 343 MGVAIERIGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKQIVSQYQ 397
>gi|416384585|ref|ZP_11684662.1| Coenzyme F420-reducing hydrogenase-like protein [Crocosphaera
watsonii WH 0003]
gi|357265028|gb|EHJ13841.1| Coenzyme F420-reducing hydrogenase-like protein [Crocosphaera
watsonii WH 0003]
Length = 404
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/415 (52%), Positives = 278/415 (66%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + G PAK+ CS CGLCDTYYI +V+ ACAF+ +I LET +HG+ R D
Sbjct: 15 KARGLKRGSRRPAKELCSDCGLCDTYYIHYVRKACAFINQ---QITELETSIHGKSRNLD 71
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+ D+ Y GVH+E++ ARK P+EGAQWTGIV+T+A EML+ G+VE VVCVQ+
Sbjct: 72 NEDECYFGVHQEMISARKKVPIEGAQWTGIVSTLACEMLERGLVEGVVCVQN-------- 123
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QA
Sbjct: 124 --TKEDRFGPMPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQA 181
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN +REGL KFL+ S P+TV+HYEFMQD++VH KH D
Sbjct: 182 LRAVEKELGLEKLYVLGTPCVDNVSREGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHED 241
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E+VP+F L N L DV APSC SCFDY N+LADLVVGYMG Q+I
Sbjct: 242 GSVEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIM 293
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRNE GKEML L+++ + P IS G+R+ V +++ A D P + L+
Sbjct: 294 VRNETGKEMLGLIEDQINTKPVISHGNRKQAVQQSIPAYDQGVT-------LPMWAAKLM 346
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I VGPKGLE+AR+S+D H RNYL++ R KK + H+P+YAKKIV Y
Sbjct: 347 GVVIERVGPKGLEYARFSIDSHFTRNYLYLKRNHPKK-LENHVPNYAKKIVSQYQ 400
>gi|443311444|ref|ZP_21041072.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechocystis sp.
PCC 7509]
gi|442778482|gb|ELR88747.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechocystis sp.
PCC 7509]
Length = 401
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/415 (52%), Positives = 272/415 (65%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYY+ +VKDACAF+ +I LET H R R
Sbjct: 12 KKAKALKPSSRRPAKELCSECGLCDTYYVHYVKDACAFIN---QQIAELETQTHTRSRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D D+ Y GV++ ++ ARKT P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 69 DDADELYFGVNQGMMAARKTDPIEGAQWTGIVSSIAIEMLTKGLVEGVVCVQN------- 121
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ARTPE++L A+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 122 ---TKEDRFQPMPIIARTPEDILKARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 178
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL S P TV+ YEFMQDY+VH KH
Sbjct: 179 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPGTVVSYEFMQDYRVHFKHE 238
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 239 DGSTETVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWI 290
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN G+EML LV++ L++ +SSGDR V +++ A D P + +
Sbjct: 291 VVRNNTGQEMLDLVQDQLQVQEVMSSGDRTAAVQQSIPAYDKGVT-------LPMWAAKM 343
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AKKIV Y
Sbjct: 344 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVQRQHPEK-LNAHVPEFAKKIVAQY 397
>gi|428772990|ref|YP_007164778.1| coenzyme F420 hydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428687269|gb|AFZ47129.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanobacterium stanieri PCC 7202]
Length = 398
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/416 (52%), Positives = 279/416 (67%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET HGR R
Sbjct: 8 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---HQQIAELETQAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ +D Y GV++E++ A+K +P+ GAQWTGIV+ IA +ML G+VE VVCVQ
Sbjct: 65 DNENDLYFGVYQEMITAQKKEPIAGAQWTGIVSAIACKMLTEGLVEGVVCVQ-------- 116
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
NS+ +DR P+P++A T EE+L A+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 117 -NSE-NDRFQPKPIIATTTEEILGARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR VE L LEKLYVLGT CVDN TREGL KFL S P+TV+ YEFMQD++VH KH
Sbjct: 175 ALREVEDKLGLEKLYVLGTPCVDNVTREGLQKFLDTTSDSPDTVVAYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E+VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGRVEKVPFFGLKTNQLKDVFAPSCMTCFDYVNSLADLVVGYMGSPF--------GWQWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV++ L+ P +S G+R+ V ++ A D P + L
Sbjct: 287 VVRNDTGKEMLDLVQDQLKTQPVMSKGNRKQAVQNSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I VGP+GLE+AR+S+D H RNYL+V R + +K D H+PSYAKKIV Y
Sbjct: 340 MGVVIEKVGPQGLEYARFSIDSHFTRNYLYVKRNYPEK-LDAHVPSYAKKIVSQYQ 394
>gi|434404674|ref|YP_007147559.1| coenzyme F420-reducing hydrogenase, beta subunit [Cylindrospermum
stagnale PCC 7417]
gi|428258929|gb|AFZ24879.1| coenzyme F420-reducing hydrogenase, beta subunit [Cylindrospermum
stagnale PCC 7417]
Length = 399
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/415 (51%), Positives = 276/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET H R R
Sbjct: 10 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGELETQTHNRPRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ ++ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 67 EDENEVYFGVHQDMMAARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQN------- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 120 ---TKEDRFQPMPIIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL KFL S P+TV+ YEFMQD++VH KH
Sbjct: 177 ALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPDTVVSYEFMQDFRVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 237 DGSTETVPFFGLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFRW--------QWI 288
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV++ L+ P +S G+R+ V +++ A D P + L
Sbjct: 289 VVRNDTGKEMLDLVQDQLDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKL 341
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 342 MGVVIERIGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVGQY 395
>gi|334119192|ref|ZP_08493279.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Microcoleus vaginatus FGP-2]
gi|333458663|gb|EGK87280.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Microcoleus vaginatus FGP-2]
Length = 400
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/415 (52%), Positives = 275/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK++CAFL I LE +HGR R
Sbjct: 10 QKSKALKPGSRRPAKELCSECGLCDTYYIHYVKESCAFL---TQHIAELEEEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GV + ++ ARK +P+EGAQWTGIV+TIAIEML+ G+VE VVCVQ+
Sbjct: 67 DNPDDWYFGVSQNMMAARKKEPIEGAQWTGIVSTIAIEMLEKGIVEGVVCVQN------- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++AR EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 120 ---TKEDRFQPMPIIARNREEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +R GL KFL S PETV+ YEFMQD+ VH KH
Sbjct: 177 ALRTVEKKLGLEKLYVLGTPCVDNVSRAGLQKFLDTTSRSPETVVSYEFMQDFNVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E+VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 237 DGSEEQVPFFGLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 288
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV + L P +S G+R+ V +++ A + P + L
Sbjct: 289 VVRNDTGQEMLDLVTDQLNTQPVMSKGNRKEAVQQSIPAYEKGVT-------LPMWAAKL 341
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ FI +GPKGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 342 MGVFIERIGPKGLEYARFSIDSHFTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQY 395
>gi|428216898|ref|YP_007101363.1| coenzyme F420 hydrogenase [Pseudanabaena sp. PCC 7367]
gi|427988680|gb|AFY68935.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena sp. PCC 7367]
Length = 396
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/414 (52%), Positives = 278/414 (67%), Gaps = 29/414 (7%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++KP+ PAK CS CGLCDTYYI +VK+ACAF+ I+ LE HGR R D
Sbjct: 7 KAKPLKNTTRRPAKALCSECGLCDTYYIHYVKEACAFI---TQHIDELEVESHGRSRDLD 63
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+ ++ Y GVH++++ A+K +P+ GAQWTGIV++IAI+ML+ +VE VVCVQS
Sbjct: 64 NENELYFGVHQDMIAAQKKEPIAGAQWTGIVSSIAIQMLEHKLVEGVVCVQSA------- 116
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
DR P+PV+ART EVLAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QA
Sbjct: 117 ---SHDRFQPKPVIARTAAEVLAARVNKPTLSPNLSVLEEIEQSGIKRLLVIGVGCQIQA 173
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN +R GLDKFL S PETV+HYEFMQD+ VH KH D
Sbjct: 174 LRTVEKELGLEKLYVLGTPCVDNVSRAGLDKFLNTTSRSPETVVHYEFMQDFNVHFKHED 233
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G IE VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 234 GSIEMVPFFGLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIV 285
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN+ GKEML LV++ L+ P +SGDR V + + A DNA P ++ +I
Sbjct: 286 VRNDTGKEMLDLVQDQLKTQPVDASGDRAAAVQQGIAAYDNATT-------IPIWLAWII 338
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+F +N +GPKGLE+ R+S+D H IRNYL+ R + +K A H+P +AK+IV Y
Sbjct: 339 SFVVNKIGPKGLEYGRFSIDSHFIRNYLYTRRNYPQKLA-AHVPEFAKRIVARY 391
>gi|158335991|ref|YP_001517165.1| coenzyme F420 hydrogenase subunit beta [Acaryochloris marina
MBIC11017]
gi|158306232|gb|ABW27849.1| coenzyme F420 hydrogenase beta subunit [Acaryochloris marina
MBIC11017]
Length = 399
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/416 (52%), Positives = 273/416 (65%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 10 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEEKAHGRSRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GV +++ ARK P+ GAQWTGIV+TI +EMLK G V+ VVC+Q
Sbjct: 67 DNEDDWYFGVSNQMMTARKVDPIPGAQWTGIVSTIGMEMLKQGKVDGVVCIQ-------- 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N+D +DR P+P++ARTPEEVLAA+ KPTLSPNL+ L +E +G+KRL GVGCQ Q
Sbjct: 119 -NTD-EDRFQPKPIIARTPEEVLAARVNKPTLSPNLSVLEQIEQSGLKRLCVIGVGCQTQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALRSV+ L LEKLYVLGT CVDN R GL FL+ S P+TV+HYEFMQD+++H KH
Sbjct: 177 ALRSVQDSLGLEKLYVLGTPCVDNVNRAGLQTFLETTSRSPDTVVHYEFMQDFRIHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE VP+F L N L D+ APSC SCFDYTN+LADLVVGYMG P Q++
Sbjct: 237 DGSIETVPFFGLKTNKLKDIFAPSCMSCFDYTNSLADLVVGYMGSPYGW--------QWL 288
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNE G+EML LV + LE P IS GDR V ++ A D P + L
Sbjct: 289 VVRNETGQEMLDLVMDQLETQPVISEGDRHAAVQNSIPAYDKGVT-------LPMWAAKL 341
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I+ +GP+GLE+AR+S+D H RNYL+V R + K D H+P YAK+IV Y+
Sbjct: 342 MGVVIDKIGPRGLEYARFSIDSHFTRNYLYVKRNYPDK-VDAHVPEYAKRIVSQYD 396
>gi|434386930|ref|YP_007097541.1| coenzyme F420-reducing hydrogenase, beta subunit [Chamaesiphon
minutus PCC 6605]
gi|428017920|gb|AFY94014.1| coenzyme F420-reducing hydrogenase, beta subunit [Chamaesiphon
minutus PCC 6605]
Length = 397
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/415 (51%), Positives = 276/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDT+YI +VK ACAFL +I LET HGR R
Sbjct: 8 QKAKALKPNSKRPAKELCSECGLCDTHYIHYVKTACAFLN---QQIPTLETQTHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D DD Y GVH++++ ARK +P+ GAQWTGIV+TIAIEML+ G+VE VVCVQ+
Sbjct: 65 DKEDDLYFGVHQQMMAARKIEPIPGAQWTGIVSTIAIEMLEQGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR P P++ART E+LAAK KPTLSPNL+ L + +G+K+LL GVGCQ+Q
Sbjct: 118 ---TPEDRFQPMPIIARTRAEILAAKVNKPTLSPNLSILEQIAESGLKKLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LE+LYVLGT C DN TR GL KFL+ S PETV++YEFMQD+ VH KH
Sbjct: 175 ALRAVEKELGLEQLYVLGTPCTDNVTRAGLQKFLETTSRSPETVVYYEFMQDFNVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSTELVPFFGLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG++ML LV N +E +S GDR V +++ A D A P +V +
Sbjct: 287 VVRNDRGQQMLDLVNNAIETQAVMSKGDRTAAVQQSIPAYDKAVT-------LPMWVAKI 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I+ +GPKGLE+AR+S+D H RNYL R + +K ++H+P +AKKIV+ Y
Sbjct: 340 MGVVIDKIGPKGLEYARFSIDSHFTRNYLFTKRNYPEK-LEQHVPEFAKKIVDRY 393
>gi|67921512|ref|ZP_00515030.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit,
N-terminal:Coenzyme F420 hydrogenase/dehydrogenase beta
subunit, C-terminal [Crocosphaera watsonii WH 8501]
gi|67856624|gb|EAM51865.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit,
N-terminal:Coenzyme F420 hydrogenase/dehydrogenase beta
subunit, C-terminal [Crocosphaera watsonii WH 8501]
Length = 404
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/415 (52%), Positives = 278/415 (66%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + G PAK+ CS CGLCDTYYI +V+ ACAF+ +I LET +HG+ R D
Sbjct: 15 KARGLKRGSRRPAKELCSDCGLCDTYYIHYVRKACAFIN---QQITELETSIHGKSRNLD 71
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+ ++ Y GVH+E++ ARK P+EGAQWTGIV+T+A EML+ G+VE VVCVQ+
Sbjct: 72 NENECYFGVHQEMISARKKVPIEGAQWTGIVSTLACEMLERGLVEGVVCVQN-------- 123
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
+DR P PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QA
Sbjct: 124 --TKEDRFDPMPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQA 181
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L LEKLYVLGT CVDN +REGL KFL+ S P+TV+HYEFMQD++VH KH D
Sbjct: 182 LRAVEKELGLEKLYVLGTPCVDNVSREGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHED 241
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E+VP+F L N L DV APSC SCFDY N+LADLVVGYMG Q+I
Sbjct: 242 GSVEKVPFFGLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIM 293
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRNE GKEML L+++ + P IS G+R+ V +++ A D P + L+
Sbjct: 294 VRNETGKEMLGLIEDQINTKPVISHGNRKQAVQQSIPAYDQGVT-------LPMWAAKLM 346
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I VGPKGLE+AR+S+D H RNYL++ R KK + H+P+YAKKIV Y
Sbjct: 347 GVVIERVGPKGLEYARFSIDSHFTRNYLYLKRNHPKK-LENHVPNYAKKIVSQYQ 400
>gi|359460880|ref|ZP_09249443.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Acaryochloris sp. CCMEE 5410]
Length = 397
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/416 (52%), Positives = 273/416 (65%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEEKAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GV +++ ARK P+ GAQWTGIV+TI +EMLK G V+ VVC+Q
Sbjct: 65 DNEDDWYFGVSNQMMTARKVDPIPGAQWTGIVSTIGMEMLKQGKVDGVVCIQ-------- 116
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
N+D +DR P+P++ARTPEEVLAA+ KPTLSPNL+ L +E +G+KRL GVGCQ Q
Sbjct: 117 -NTD-EDRFQPKPIIARTPEEVLAARVNKPTLSPNLSVLEQIEQSGLKRLCVIGVGCQTQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALRSV+ L LEKLYVLGT CVDN R GL FL+ S P+TV+HYEFMQD+++H KH
Sbjct: 175 ALRSVQDSLGLEKLYVLGTPCVDNVNRAGLQTFLETTSRSPDTVVHYEFMQDFRIHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE VP+F L N L D+ APSC SCFDYTN+LADLVVGYMG P Q++
Sbjct: 235 DGSIETVPFFGLKTNKLKDIFAPSCMSCFDYTNSLADLVVGYMGSPYGW--------QWL 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNE G+EML LV + LE P IS GDR V ++ A D P + L
Sbjct: 287 VVRNETGQEMLDLVMDQLETQPVISEGDRHAAVQNSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I+ +GP+GLE+AR+S+D H RNYL+V R + K D H+P YAK+IV Y+
Sbjct: 340 MGVVIDKIGPRGLEYARFSIDSHFTRNYLYVKRNYPDK-VDAHVPEYAKRIVSQYD 394
>gi|119512109|ref|ZP_01631202.1| hypothetical protein N9414_07474 [Nodularia spumigena CCY9414]
gi|119463267|gb|EAW44211.1| hypothetical protein N9414_07474 [Nodularia spumigena CCY9414]
Length = 397
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/415 (52%), Positives = 277/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAF+ +I GLE H R R
Sbjct: 8 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGGLEEQTHKRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+
Sbjct: 65 DNENELYFGVHQDMIAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+ RLL GVGCQ+Q
Sbjct: 118 ---TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMTRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TR GL FL+ S P+TV+HYEFMQD++VH KH
Sbjct: 175 ALRAVEKELGLEKLYVLGTPCVDNVTRAGLQTFLETTSRSPDTVVHYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC +CFDY N+LADLVVGYMG P Q+I
Sbjct: 235 DGSSETVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWI 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ GKEML LV++ L+ P +S G+R+ V +++ A D P + L
Sbjct: 287 VVRNDTGKEMLDLVQDQLDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P +AK+IV Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEFAKRIVGGY 393
>gi|300869262|ref|ZP_07113854.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Oscillatoria sp. PCC 6506]
gi|300332718|emb|CBN59052.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Oscillatoria sp. PCC 6506]
Length = 400
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/415 (52%), Positives = 274/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAFL I LE +HGR R
Sbjct: 10 KKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFL---TQHIAELEAEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GV++ ++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+
Sbjct: 67 DNPDDWYFGVNQTMMAARKKEPIEGAQWTGIVSTIAIEMLNRGIVEGVVCVQN------- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++A TPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 120 ---TKEDRFQPMPIIATTPEEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +R+GL KFL+ S ETV+ YEFMQD+ VH KH
Sbjct: 177 ALRTVEKKLGLEKLYVLGTPCVDNVSRDGLQKFLETTSRSHETVVSYEFMQDFNVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E+VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 237 DGTTEKVPFFGLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 288
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV L P +S G+R P V +++ A + P + L
Sbjct: 289 VVRNDTGQEMLDLVMEQLNTQPVMSQGNRMPAVQQSIPAYEKGVT-------LPMWAAKL 341
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ FI +GPKGLE+AR+S+D H RNYL+V R +K + H+P YAK+IV Y
Sbjct: 342 MGVFIEKIGPKGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEYAKRIVGQY 395
>gi|428220142|ref|YP_007104312.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
PCC 7502]
gi|427993482|gb|AFY72177.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
PCC 7502]
Length = 396
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/403 (53%), Positives = 271/403 (67%), Gaps = 29/403 (7%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK CS CGLCDTYYI +VK+ACAF+ I+ LE H R R D+ + Y GVH+
Sbjct: 18 PAKALCSECGLCDTYYIHYVKEACAFI---TQHIQELEVQTHRRDRNLDNEQELYFGVHQ 74
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
E++ ARKT P+ GAQWTGIV++IAIEML +G VE VVCVQ+ SD DR +P+
Sbjct: 75 EMIAARKTDPIAGAQWTGIVSSIAIEMLTSGKVEGVVCVQA---------SD-SDRFTPK 124
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P++A TPEE+LAA+ KPTLSPNL+ L LVE +G+KRLL GVGCQ+QALR+VE L LE
Sbjct: 125 PIIATTPEEILAARVNKPTLSPNLSVLELVERSGMKRLLVIGVGCQIQALRTVEKQLGLE 184
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
KLYVLGT CVDN R GL KFL S P TV+ YEFMQD+ VH KH DG E VP+F L
Sbjct: 185 KLYVLGTPCVDNVNRAGLQKFLDTTSRSPSTVVSYEFMQDFNVHFKHEDGSTEMVPFFGL 244
Query: 300 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
+L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 245 NTKELKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEMLE 296
Query: 360 LVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKG 419
V++ LE P +SSGDR V + + A DNA P +V ++I F +N +GPKG
Sbjct: 297 SVQSQLESQPVMSSGDRHSAVQQGIAAYDNATT-------LPMWVASIINFVVNKIGPKG 349
Query: 420 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
LE+ R+S+D H IRNYL+ R + +K + H+P +AK+I+ Y
Sbjct: 350 LEYGRFSIDSHFIRNYLYTKRNYPQK-LEAHVPEFAKRIIAQY 391
>gi|56750204|ref|YP_170905.1| hypothetical protein syc0195_d [Synechococcus elongatus PCC 6301]
gi|81300168|ref|YP_400376.1| coenzyme F420 hydrogenase [Synechococcus elongatus PCC 7942]
gi|56685163|dbj|BAD78385.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169049|gb|ABB57389.1| coenzyme F420 hydrogenase [Synechococcus elongatus PCC 7942]
Length = 401
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/416 (51%), Positives = 275/416 (66%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++ + PG PAKD CS CGLCDT Y+ +VK+ACAFL + E LE VHGR R
Sbjct: 8 RRARALKPGSRRPAKDLCSECGLCDTSYVHYVKEACAFLN---QQFEPLEQQVHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ D+ Y GVH+ + A+K +P+EGAQWTGIV+ +A ML+ G VE VVCVQ+
Sbjct: 65 ENPDELYFGVHQSMTAAQKREPIEGAQWTGIVSALACRMLEQGWVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P DR P PV+ART +E+LAA+ KPTLSPNLN L L+E +G+KRLL GVGCQ+Q
Sbjct: 118 ---SPSDRFQPMPVIARTTDEILAARVNKPTLSPNLNILDLIEQSGLKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L L+KLYVLGT CVDN +R GL KFL+ S PETV+HYEFMQD+++H KH
Sbjct: 175 ALRAVQDKLGLDKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG IE VP+F L +L DV APSC SCFDYTN LADLVVGYMG P Q++
Sbjct: 235 DGSIEMVPFFGLKTKELKDVFAPSCLSCFDYTNGLADLVVGYMGAPFGW--------QWL 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNE G+EM L+++ L + P SSGDRR V ++ A + P + L
Sbjct: 287 VVRNEIGQEMFDLIQDDLRLQPVQSSGDRRAAVQNSIPAYEQGVQ-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+AR+S+D H RN L+V R + +K A+ H+P +AK+IV Y
Sbjct: 340 MGLVIERIGPKGLEYARFSIDSHFTRNALYVRRNYPEK-AETHIPEFAKRIVSQYQ 394
>gi|443322535|ref|ZP_21051555.1| coenzyme F420-reducing hydrogenase, beta subunit [Gloeocapsa sp.
PCC 73106]
gi|442787696|gb|ELR97409.1| coenzyme F420-reducing hydrogenase, beta subunit [Gloeocapsa sp.
PCC 73106]
Length = 397
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/415 (51%), Positives = 273/415 (65%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++++ + PG PAK+ CS CGLCDT+YI +VK+ACAFL +I LE HGR R
Sbjct: 8 QKARALKPGSRRPAKELCSECGLCDTHYIHYVKEACAFLN---QQIAALEATFHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+ IA ML G VE VVCVQ+
Sbjct: 65 DNENELYFGVHQQMIAARKKEPIEGAQWTGIVSAIACTMLTQGKVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P+LA TPEE+LAA+ KPTLSPNL+ L +E +G+KR+L GVGCQ+Q
Sbjct: 118 ---TKEDRFQPMPILATTPEEILAARVNKPTLSPNLSILEQIEKSGMKRVLAIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN TREGL KFL S PETV+HYEFMQD++VH KH
Sbjct: 175 ALRTVEKKLGLEKLYVLGTPCVDNVTREGLQKFLDTTSRSPETVVHYEFMQDFQVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +E+VP+F L N L DV APSC SCFDY N+LADLVVGYMG P Q++
Sbjct: 235 DGSVEKVPFFGLKTNQLKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWL 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV LE +S GDR V +++ A D P + L
Sbjct: 287 VVRNDTGQEMLDLVWEQLETQAVMSKGDRHQAVQQSIPAYDKGVT-------LPMWAAKL 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ I +GPKGLE+AR+S+D H RNYL++ R + KK + +P YA+KIV Y
Sbjct: 340 MGVVIEKIGPKGLEYARFSIDSHFTRNYLYLKRNYPKK-LESQVPEYAQKIVNQY 393
>gi|428318671|ref|YP_007116553.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428242351|gb|AFZ08137.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 400
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/415 (52%), Positives = 275/415 (66%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK++CAFL I LE +HGR R
Sbjct: 10 QKSKALKPGSRRPAKELCSECGLCDTYYIHYVKESCAFL---TQHIAELEAEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ DD Y GV + ++ ARK +P+EGAQWTGIV+TIAIEML+ G+VE VVCVQ+
Sbjct: 67 NNPDDWYFGVSQNMMAARKKEPIEGAQWTGIVSTIAIEMLEKGIVEGVVCVQN------- 119
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P++A EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 120 ---TKEDRFQPMPIIATNREEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQ 176
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +R GL KFL S PETV+ YEFMQD+KVH KH
Sbjct: 177 ALRTVEKKLGLEKLYVLGTPCVDNVSRAGLQKFLDTTSRSPETVVSYEFMQDFKVHFKHE 236
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E+VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 237 DGSEEKVPFFGLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 288
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV + L P +S G+R+ V +++ A + P + L
Sbjct: 289 VVRNDTGQEMLDLVTDQLNTQPVMSKGNRKEAVQQSIPAYEKGVT-------LPMWAAKL 341
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ FI +GPKGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 342 MGVFIERIGPKGLEYARFSIDSHFTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQY 395
>gi|86605899|ref|YP_474662.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-3-3Ab]
gi|86554441|gb|ABC99399.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-3-3Ab]
Length = 402
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/420 (51%), Positives = 282/420 (67%), Gaps = 36/420 (8%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR---- 105
++PI G YPAK+ CS+CGLCDT Y+AHVK+ACAFL +R LE HGR R
Sbjct: 9 ARPIR-SGHYPAKELCSQCGLCDTRYVAHVKEACAFLNQQFTR---LEEQTHGRSRESLR 64
Query: 106 -RKDSLDDT-YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
+ D++ D+ Y GV+E + AR+ P+ GAQWTGIV++I ++ L +G+VE VVCVQ+
Sbjct: 65 SKSDAVSDSDYFGVYEAMYTARRRDPIPGAQWTGIVSSIGMKALSSGLVEGVVCVQA--- 121
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVG 223
DP DR PRPVLARTPE VLAA+ KPTLSPNL+ L VE +G+KRLL GVG
Sbjct: 122 -------DPRDRFQPRPVLARTPEAVLAARVNKPTLSPNLSVLEQVEQSGLKRLLVIGVG 174
Query: 224 CQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 283
CQ+QALR+VE +L LEKLYVLGT CVDN +R GL KFL+ S P+TV+HYEFMQD+ VH
Sbjct: 175 CQIQALRAVEKNLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPQTVVHYEFMQDFHVH 234
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
KH DG +E+VP+F L +L DV APSC +CFDY N+LADLVVGYMG P
Sbjct: 235 FKHEDGSVEKVPFFGLKTKELKDVFAPSCLTCFDYVNSLADLVVGYMGSPFGW------- 287
Query: 344 PQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKF 403
Q++ VRN RG+E+L LV LE P IS G RR V + ++A + A P +
Sbjct: 288 -QWLLVRNARGRELLDLVWEELETQPVISRGSRRAAVQQGIQAYEQAL-------SLPMW 339
Query: 404 VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ L+A I GP+GLE+AR+S+D H +RNYL+V R + K ++H+P +A++IVE Y
Sbjct: 340 LAQLLAVAIQRFGPRGLEYARFSIDSHFVRNYLYVRRHYPHK-LEQHVPPFARRIVEQYQ 398
>gi|16331168|ref|NP_441896.1| hypothetical protein slr1923 [Synechocystis sp. PCC 6803]
gi|383322911|ref|YP_005383764.1| hypothetical protein SYNGTI_2002 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326080|ref|YP_005386933.1| hypothetical protein SYNPCCP_2001 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491964|ref|YP_005409640.1| hypothetical protein SYNPCCN_2001 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437232|ref|YP_005651956.1| hypothetical protein SYNGTS_2003 [Synechocystis sp. PCC 6803]
gi|451815324|ref|YP_007451776.1| hypothetical protein MYO_120210 [Synechocystis sp. PCC 6803]
gi|1653662|dbj|BAA18574.1| slr1923 [Synechocystis sp. PCC 6803]
gi|339274264|dbj|BAK50751.1| hypothetical protein SYNGTS_2003 [Synechocystis sp. PCC 6803]
gi|359272230|dbj|BAL29749.1| hypothetical protein SYNGTI_2002 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275400|dbj|BAL32918.1| hypothetical protein SYNPCCN_2001 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278570|dbj|BAL36087.1| hypothetical protein SYNPCCP_2001 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781293|gb|AGF52262.1| hypothetical protein MYO_120210 [Synechocystis sp. PCC 6803]
Length = 398
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/416 (52%), Positives = 275/416 (66%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ + + LE HGR R
Sbjct: 8 QKAKGLKPGSPRPAKELCSDCGLCDTYYIHYVKEACAFIN---QQFDHLEEQTHGRSREL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ Y GVH+++L A+K +P+ GAQWTGIV+TI EML G+VE VVCVQ+
Sbjct: 65 GKEDEVYFGVHQKMLTAQKKEPIPGAQWTGIVSTIGCEMLNKGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR P+ V+ARTP EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 118 ---TPEDRFQPQVVIARTPAEVLAAKVNKPTLSPNLSVLEEVEKSGLKRLLVIGVGCQIQ 174
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +R GL KFL+ S PETV++YEFMQD++VH KH
Sbjct: 175 ALRAVEKQLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVYYEFMQDFRVHFKHE 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L +V APSC SCFDY N LADLVVGYMG P Q++
Sbjct: 235 DGSTELVPFFGLKTNQLKEVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWL 286
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV++ L I SSGDR V + + A D A P +V +
Sbjct: 287 VVRNQTGQEMLDLVQDQLHIGQVSSSGDRHQAVQQGITAYDKAVT-------LPMWVAKI 339
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I+ +GP GLE+AR+S+D H RNYL+V R +K AD H+P +AKKIVE Y
Sbjct: 340 MGLVIDKIGPTGLEYARFSIDSHFTRNYLYVKRNHPEKLAD-HVPPFAKKIVEQYK 394
>gi|407961454|dbj|BAM54694.1| hypothetical protein BEST7613_5763 [Bacillus subtilis BEST7613]
Length = 405
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/416 (52%), Positives = 275/416 (66%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ + + LE HGR R
Sbjct: 15 QKAKGLKPGSPRPAKELCSDCGLCDTYYIHYVKEACAFIN---QQFDHLEEQTHGRSREL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ Y GVH+++L A+K +P+ GAQWTGIV+TI EML G+VE VVCVQ+
Sbjct: 72 GKEDEVYFGVHQKMLTAQKKEPIPGAQWTGIVSTIGCEMLNKGLVEGVVCVQN------- 124
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR P+ V+ARTP EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 ---TPEDRFQPQVVIARTPAEVLAAKVNKPTLSPNLSVLEEVEKSGLKRLLVIGVGCQIQ 181
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE L LEKLYVLGT CVDN +R GL KFL+ S PETV++YEFMQD++VH KH
Sbjct: 182 ALRAVEKQLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVYYEFMQDFRVHFKHE 241
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L +V APSC SCFDY N LADLVVGYMG P Q++
Sbjct: 242 DGSTELVPFFGLKTNQLKEVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWL 293
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+ G+EML LV++ L I SSGDR V + + A D A P +V +
Sbjct: 294 VVRNQTGQEMLDLVQDQLHIGQVSSSGDRHQAVQQGITAYDKAVT-------LPMWVAKI 346
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I+ +GP GLE+AR+S+D H RNYL+V R +K AD H+P +AKKIVE Y
Sbjct: 347 MGLVIDKIGPTGLEYARFSIDSHFTRNYLYVKRNHPEKLAD-HVPPFAKKIVEQYK 401
>gi|170079232|ref|YP_001735870.1| putative coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Synechococcus sp. PCC 7002]
gi|169886901|gb|ACB00615.1| putative coenzyme F420 hydrogenase/dehydrogenase, beta subunit
[Synechococcus sp. PCC 7002]
Length = 399
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/416 (51%), Positives = 269/416 (64%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K +P G PAK CS CGLCDT++I +VK+ACAFL + + LET VHGR R
Sbjct: 9 KKAKGLPRGSVRPAKALCSDCGLCDTHFIHYVKEACAFLN---QQFDKLETKVHGRKRDL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D + Y GVH++++ ARKT+P+EGAQWTGIV+++A +ML+ +VE VVCVQS
Sbjct: 66 DQEQEMYFGVHQKMVAARKTEPIEGAQWTGIVSSLACKMLEEKLVEGVVCVQS------- 118
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
PDDR P P++A TPEE+LAA+ KPTLSPNL L +E G K+LL GVGCQ+Q
Sbjct: 119 ---SPDDRFQPMPIIATTPEEILAARVNKPTLSPNLTILEQIEQGGFKKLLVIGVGCQIQ 175
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L LEKLYVLG CVDN TR GL KFL S PETV++YEFMQD+KVH KH
Sbjct: 176 ALRAVQDKLGLEKLYVLGLPCVDNVTRAGLQKFLDTTSRSPETVVYYEFMQDFKVHFKHE 235
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L DV APSC SCFDYTN LADLVVGYMG P Q++
Sbjct: 236 DGSTETVPFFGLKTNQLKDVFAPSCMSCFDYTNGLADLVVGYMGAPFGW--------QWM 287
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRNE G+EM LV + +E P S GDRR V ++ A D P + L
Sbjct: 288 VVRNETGQEMFDLVADQIETQPVSSKGDRRAAVQNSIPAYDKGVT-------LPMWAAKL 340
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ I +GPKGLE+A++S+D H RNYL+ R + K + H+P +AKKIV Y
Sbjct: 341 MGIVIEKIGPKGLEYAKFSIDSHFTRNYLYTRRNYPGK-LEAHVPEFAKKIVAQYE 395
>gi|86608737|ref|YP_477499.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557279|gb|ABD02236.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 402
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/420 (52%), Positives = 277/420 (65%), Gaps = 36/420 (8%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR---R 106
++PI G YPAK+ CS+CGLCDT Y+AHVK+ACAFL +++ LE HGR R R
Sbjct: 9 ARPIR-SGRYPAKELCSQCGLCDTRYVAHVKEACAFLNQQLTQ---LEEQTHGRSRESLR 64
Query: 107 KDSL---DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
SL D Y GV+E + ARK P+ GAQWTGIV++I ++ L TG+VE VVCVQ+
Sbjct: 65 SGSLAVTDTDYFGVYEAMYTARKRDPIPGAQWTGIVSSIGMKALTTGLVEGVVCVQA--- 121
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVG 223
D DR PRP+LARTPE V AA+ KPTLSPNL+ L VE +G+KRLL GVG
Sbjct: 122 -------DERDRFQPRPILARTPEAVWAARVNKPTLSPNLSVLEQVEQSGLKRLLVIGVG 174
Query: 224 CQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 283
CQ+QALR+VE L LEKLYVLGT CVDN +R GL KFL+ S P+TV+HYEFMQD+ +H
Sbjct: 175 CQIQALRAVEKKLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPQTVVHYEFMQDFHIH 234
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
KH DG +E+VP+F L +L DV APSC SCFDY NALADLVVGYMG P
Sbjct: 235 FKHEDGSVEKVPFFGLKTKELKDVFAPSCLSCFDYVNALADLVVGYMGSPLGW------- 287
Query: 344 PQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKF 403
Q++ VRN+RG+E+L LV LE P IS G RR V + + A D A P +
Sbjct: 288 -QWLLVRNQRGQELLDLVWEELETQPVISQGSRRAAVQQGIPAYDQAL-------SLPMW 339
Query: 404 VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ L+ I GP+GLE+AR+S+D H RNYL+V R + +K ++H+P +A++IVE Y
Sbjct: 340 LARLLGAAIQRFGPRGLEYARFSIDSHFTRNYLYVRRHYPQK-LEQHVPPFARRIVEQYQ 398
>gi|428302019|ref|YP_007140325.1| coenzyme F420 hydrogenase [Calothrix sp. PCC 6303]
gi|428238563|gb|AFZ04353.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Calothrix sp. PCC 6303]
Length = 404
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/423 (50%), Positives = 278/423 (65%), Gaps = 36/423 (8%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTY++ +VK+ACAF+ +I LE HGR R
Sbjct: 8 KKAKALKAGSRRPAKELCSECGLCDTYFVHYVKNACAFIN---QQIGALEQQTHGRERLT 64
Query: 108 -------DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQS 160
++ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML GMVE VVCVQ+
Sbjct: 65 SRQLPILENPDELYFGVHQQMMAARKVEPIEGAQWTGIVSSIAIEMLNRGMVEGVVCVQN 124
Query: 161 LVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 220
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL
Sbjct: 125 ----------TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEEIEKSGMKRLLVI 174
Query: 221 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
GVGCQ+QALR+VE L LEKLYVLGT CVDN TR GL KFL S P+TV++YEFMQD+
Sbjct: 175 GVGCQIQALRAVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPDTVVYYEFMQDF 234
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
+VH KH DG +E VP+F L +L DV APSC SCFDY N+LADLVVGYMG P
Sbjct: 235 RVHFKHEDGSLETVPFFGLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW---- 290
Query: 341 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 400
Q++ VRN+ GKEML LV++ +E P S G R+ V +++ A D
Sbjct: 291 ----QWLIVRNDTGKEMLELVQDQIETQPVTSQGKRQEAVQQSIPAYDKGVT-------L 339
Query: 401 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 460
P + L+ I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV+
Sbjct: 340 PMWAAKLMGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRHHPEK-LESHVPEFAKQIVK 398
Query: 461 MYN 463
Y
Sbjct: 399 QYK 401
>gi|449016811|dbj|BAM80213.1| similar to coenzyme F420-reducing hydrogenase, beta subunit
[Cyanidioschyzon merolae strain 10D]
Length = 508
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/415 (52%), Positives = 267/415 (64%), Gaps = 39/415 (9%)
Query: 58 TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGV 117
YPAK CS CGLCDT YI +V+D+CAFL I LE VHGR R DS D+ Y GV
Sbjct: 118 VYPAKSLCSHCGLCDTRYITYVRDSCAFLNQ---HIAELEQKVHGRSRALDSEDELYFGV 174
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
+ +L ARK KP+ GAQWTGIV+++AI ML++G+VE VVCVQS DDR
Sbjct: 175 FQSMLVARKKKPIAGAQWTGIVSSLAIAMLESGLVEGVVCVQS----------SKDDRFK 224
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 237
P PV+AR E+LAA+ KPTLSPNL+ L VE +G+KRLLF GVGCQV+ALRSV+ +
Sbjct: 225 PVPVIARNRAEILAARVNKPTLSPNLSVLDAVERSGIKRLLFIGVGCQVEALRSVQDRIG 284
Query: 238 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI------ 291
LEKLYVLGT CVDN TR GL KFL SS PETV++YEFMQD++VH KH D I
Sbjct: 285 LEKLYVLGTPCVDNVTRAGLQKFLDTTSSSPETVVYYEFMQDFRVHFKHDDSVIGGPGRK 344
Query: 292 --EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 349
E VP+F L +L +V APSC SCFDY N LADLVVGYMG P Q++
Sbjct: 345 WDEIVPFFALNTQELKEVFAPSCLSCFDYVNGLADLVVGYMGAPFGW--------QWLVA 396
Query: 350 RNERGKEMLSLVKNL--LEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
RNE G EML L + + LE P + GDRR V +++ A D A P+++
Sbjct: 397 RNETGLEMLELARQVCGLEEGPVDACGDRRAAVQQSITAYDRALT-------LPRWIAEF 449
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+A I +GPKGLE+AR+S+D H RNYL+V R + +K D H+P YAK+IV Y
Sbjct: 450 LAIIIGKIGPKGLEYARFSIDSHFTRNYLYVRRRYPEK-LDAHVPEYAKRIVSQY 503
>gi|427701554|ref|YP_007044776.1| coenzyme F420-reducing hydrogenase subunit beta [Cyanobium gracile
PCC 6307]
gi|427344722|gb|AFY27435.1| coenzyme F420-reducing hydrogenase, beta subunit [Cyanobium gracile
PCC 6307]
Length = 406
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/415 (49%), Positives = 273/415 (65%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
R++P+ G PAKD CS CGLCD+ ++A+V+ ACAFL R E +E HGR RR D
Sbjct: 17 RARPLAKGSPKPAKDLCSDCGLCDSRWVAYVRRACAFL---EQRFEAMEEQAHGRSRRLD 73
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
D+ Y GVH+ ++ AR +P+EGAQWTGIV+ I + L++G+V+AV+CVQ
Sbjct: 74 DEDELYFGVHQRMVTARLRQPIEGAQWTGIVSRIGVRALESGLVDAVLCVQQ-------- 125
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
PDDR +P PVLARTP+EVLAA+ KPTLSPNL L + +G++RLL GVGCQ+QA
Sbjct: 126 --SPDDRFTPVPVLARTPQEVLAARVNKPTLSPNLEVLEQLPGSGIERLLAIGVGCQIQA 183
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+V+ L L+KLYVLG CVDN +R+GL FL++AS P+TV+HYEFMQD+++H +H D
Sbjct: 184 LRAVQATLPLQKLYVLGLPCVDNVSRQGLQTFLESASRSPDTVVHYEFMQDFRIHFRHSD 243
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G E VP+F L L DV APSC SCFDYTNA ADLVVGYMG T Q++T
Sbjct: 244 GQEETVPFFGLDTPALKDVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWVT 295
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN G+E+L LV+ L++ P SSGDRR V + + A + A P ++ L+
Sbjct: 296 VRNPLGQELLDLVEPELDLAPVTSSGDRRQAVQQGIDAYEKALK-------LPMWLAELV 348
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
F+ GPKGLE+ R+S+D H RN L + R +K D H+P++A++IV Y
Sbjct: 349 GVFVQRFGPKGLEYGRFSIDSHFTRNALWLQRHHPEK-VDAHIPAFARRIVARYR 402
>gi|318040250|ref|ZP_07972206.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Synechococcus sp. CB0101]
Length = 404
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 274/416 (65%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R+KP+ G YPAKD CS+CGLCD+ ++A+VKD+CAFL R + +E HGR R
Sbjct: 15 ERAKPLAKGSVYPAKDLCSQCGLCDSRWVAYVKDSCAFLN---QRFDAMEAAAHGRSRDL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GV + +L AR +P++GAQWTGIV+ I + L+TG+V+AV+CV
Sbjct: 72 DNEDELYFGVQQRMLTARLQQPLDGAQWTGIVSRIGVRALETGLVDAVLCV--------- 122
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
DDR +P P LARTPEEVL+A+ KPTLSPNL L + +G+KRLL GVGCQ+Q
Sbjct: 123 -GQSEDDRFTPVPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIKRLLAIGVGCQIQ 181
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L L++L+VLG CVDN +R+GL FL++ S P+TV+HYEFMQD+++H +H
Sbjct: 182 ALRAVQPTLPLDELFVLGLPCVDNVSRQGLQTFLESTVSSPDTVVHYEFMQDFRIHFRHS 241
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L L DV APSC SCFDYTNA ADLVVGYMG T Q++
Sbjct: 242 DGREETVPFFGLDTPKLKDVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWL 293
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
TVRN +G+++L LV+ L++ P SSG R+ V + ++A D A P +V NL
Sbjct: 294 TVRNPKGQQLLDLVEAELDVAPVSSSGQRQAAVQQGIEAYDKAVK-------LPIWVANL 346
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
I FF+ GPKGLE+ R+S+D H RN + + R K + H+P++A++I+ Y
Sbjct: 347 IGFFVERFGPKGLEYGRFSIDSHFTRNAVWLRRHHPDK-VEAHIPAFARRIISRYR 401
>gi|87303404|ref|ZP_01086192.1| hypothetical protein WH5701_10265 [Synechococcus sp. WH 5701]
gi|87282052|gb|EAQ74014.1| hypothetical protein WH5701_10265 [Synechococcus sp. WH 5701]
Length = 394
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/415 (48%), Positives = 273/415 (65%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++P+ G PA+D CS CGLCDT ++A+V+DACAFL G R+E L HGR R
Sbjct: 5 ERARPLAKGSVKPARDLCSECGLCDTGWVAYVRDACAFLTQGFDRMEEL---AHGRRRDL 61
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ D+ Y GV+E +L AR P+EGAQWTGIV+ I + L++G+V+AV+CVQ
Sbjct: 62 ANDDELYFGVYERMLTARLQPPIEGAQWTGIVSRIGVRALESGLVDAVLCVQQ------- 114
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
PDDR +P PVLARTPEEVLAA+ KPTLSPNL L + +G++RLL GVGCQ+Q
Sbjct: 115 ---SPDDRFTPVPVLARTPEEVLAARVNKPTLSPNLEVLQQLPGSGIRRLLAIGVGCQIQ 171
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L L++LYVLG CVDN +R GL FL++AS +TV+HYEFMQD+++H +H
Sbjct: 172 ALRAVQDTLPLDELYVLGMPCVDNVSRSGLQTFLESASRSADTVVHYEFMQDFRIHFRHS 231
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L +L V APSC SCFDYTNA ADLVVGYMG + Q++
Sbjct: 232 DGSEETVPFFGLDTPNLKSVFAPSCLSCFDYTNAGADLVVGYMGA--------SFGRQWL 283
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN +G+++L LV+ L+ P S G+RR V + ++A D A P ++ +
Sbjct: 284 VVRNPKGQQLLDLVEAELDTAPVTSQGNRRAAVQQGIEAYDKAVK-------LPLWLAEV 336
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ FF+N GPKGLE+ R+S+D H RN + V R +AD+H+P++AK I+ Y
Sbjct: 337 VGFFVNRFGPKGLEYGRFSIDSHFTRNAIWVRRH-HPDQADRHIPAFAKAIISRY 390
>gi|148239886|ref|YP_001225273.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
WH 7803]
gi|147848425|emb|CAK23976.1| Coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
WH 7803]
Length = 402
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/415 (48%), Positives = 269/415 (64%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++PIP PAKD CS CGLCD+ ++A+V+ ACAFL +G+E HGR R D
Sbjct: 13 QARPIPRDRIRPAKDLCSDCGLCDSRWVAYVRQACAFLHQDF---DGMERKAHGRARDLD 69
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
D+ Y GV + +L AR P+ GAQWTGIV+ + + L+TG+V+AV+CVQ
Sbjct: 70 QEDELYFGVQQRMLTARLQTPIAGAQWTGIVSRLGVRALETGLVDAVLCVQQ-------- 121
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
PDDR +P PVLARTPEEVLAA+ KPTLS NL+ L + +G+KRLL GVGCQVQA
Sbjct: 122 --SPDDRFTPMPVLARTPEEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQVQA 179
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+V+ L LE LYVLG CVDN +REGL FL++AS+ P+TV+HYEFMQD+++H +H D
Sbjct: 180 LRAVQDTLPLEALYVLGLPCVDNVSREGLQTFLESASATPDTVVHYEFMQDFRIHFRHSD 239
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G +E VP+F L L DV APSC SCFDY NA ADLVVGYMG Q++
Sbjct: 240 GRVETVPFFGLDTPALKDVFAPSCLSCFDYVNAGADLVVGYMGAEFGR--------QWLV 291
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN RG+++L LV+ L+ P +S GDRR V + + A D A P ++ ++
Sbjct: 292 VRNSRGEDLLKLVEAELDQAPVMSRGDRRQAVQQGIDAYDKALR-------LPMWLAEVV 344
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ + VGPKGLE+ R+S+D H RN L + R + ++H+P++A++IVE Y
Sbjct: 345 GWIVQRVGPKGLEYGRFSIDSHFTRNALWLRRH-HPEVVERHLPAFARRIVERYR 398
>gi|88808927|ref|ZP_01124436.1| hypothetical protein WH7805_04526 [Synechococcus sp. WH 7805]
gi|88786869|gb|EAR18027.1| hypothetical protein WH7805_04526 [Synechococcus sp. WH 7805]
Length = 402
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/415 (48%), Positives = 269/415 (64%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++PIP PAKD CS CGLCD+ ++A+V+ ACAFL +G+E HGR R D
Sbjct: 13 QARPIPRDRIRPAKDLCSDCGLCDSRWVAYVRQACAFLHQD---FDGMERKAHGRTRNLD 69
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
D+ Y GV + +L AR P++GAQWTGIV+ + + L++G+V+AV+CVQ
Sbjct: 70 QEDELYFGVQQRMLTARLQTPIDGAQWTGIVSRLGVRALESGLVDAVLCVQQ-------- 121
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
PDDR +P PVLARTP EVLAA+ KPTLS NL+ L + +G+KRLL GVGCQVQA
Sbjct: 122 --SPDDRFTPMPVLARTPAEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQVQA 179
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+V+ L L+ LYVLG CVDN +REGL FL++AS+ P+TV+HYEFMQD+++H +H D
Sbjct: 180 LRAVQDTLPLDALYVLGLPCVDNVSREGLQTFLESASASPDTVVHYEFMQDFRIHFRHSD 239
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
GH+E VP+F L L DV APSC SCFDY NA ADLVVGYMG Q++
Sbjct: 240 GHVETVPFFGLDTPALKDVFAPSCLSCFDYVNAGADLVVGYMGAEFGR--------QWLV 291
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN RG+E+L LV+ L+ P S GDRR V + + A D A P ++ L+
Sbjct: 292 VRNSRGEELLKLVEAELDQAPVSSRGDRRQAVQQGIDAYDKALR-------LPMWLAELV 344
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ + VGPKGLE+ R+S+D H RN L + R + ++H+P++A++IVE Y
Sbjct: 345 GWIVQRVGPKGLEYGRFSIDSHFTRNALWLRRH-HPEMVERHLPAFARRIVERYR 398
>gi|37520447|ref|NP_923824.1| hypothetical protein gll0878 [Gloeobacter violaceus PCC 7421]
gi|35211441|dbj|BAC88819.1| gll0878 [Gloeobacter violaceus PCC 7421]
Length = 391
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/410 (50%), Positives = 265/410 (64%), Gaps = 29/410 (7%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P PA + CS CGLCDT Y+ + K ACAF+ M + LE+ HGR R D+ +
Sbjct: 7 PKPKNRPALELCSECGLCDTSYLRYAKWACAFITQHM---DELESKTHGRERDLDNEREL 63
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
Y GVH ++ ARK KPVEGAQWTGIV+TI + L++G+V+AV+CV +D
Sbjct: 64 YFGVHRQMYAARKRKPVEGAQWTGIVSTIGVRALESGLVDAVLCV----------GADKI 113
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
DR +PRP+LARTPEEVLAA+ KPTLSPNL+ L + G+KRLL GVGCQ+QALR+V+
Sbjct: 114 DRFTPRPLLARTPEEVLAARVNKPTLSPNLSVLDEIPKLGIKRLLAIGVGCQIQALRTVQ 173
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L LE LYVLGT CVDN TR+GL FL + S P TV+HYEFMQD+++H KH DG IE+
Sbjct: 174 DKLGLEALYVLGTPCVDNVTRQGLQTFLDSTSRSPATVVHYEFMQDFRIHFKHEDGSIEK 233
Query: 294 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 353
VP+F L L +V APSC SCFDY N LADLVVGYMG Q+I RNE+
Sbjct: 234 VPFFGLDTKALKEVFAPSCLSCFDYVNGLADLVVGYMGA--------QFGWQWIVERNEK 285
Query: 354 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 413
G+ +L LV++ LE T + SG R V + ++A D A P +V ++ I+
Sbjct: 286 GRVLLDLVRDELEFTDIVESGKRFAAVQQGIEAYDKAVT-------LPMWVAKVMGAVID 338
Query: 414 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+GP+GLE+AR+S+D H RNYL+V R + K D+H+P YAKKIV Y
Sbjct: 339 KIGPRGLEYARFSIDSHFARNYLYVRRRYPGK-FDRHIPRYAKKIVSRYK 387
>gi|317970406|ref|ZP_07971796.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Synechococcus sp. CB0205]
Length = 405
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/415 (46%), Positives = 270/415 (65%), Gaps = 29/415 (6%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
R++P+ G TYPAKD CS+CGLCD+ ++A+VKD+CAFL R E +ET HGR R +
Sbjct: 16 RARPLAKGSTYPAKDLCSQCGLCDSRWVAYVKDSCAFLN---QRFEAMETAAHGRSRDLE 72
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+ D+ Y GV + +L AR +P++GAQWTGI + I + L++G+V+AV+CV
Sbjct: 73 NEDELYFGVQQRMLTARLQQPIDGAQWTGIASRIGVLALESGLVDAVLCV---------- 122
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
DDR +P P LARTPEEVL+A+ KPTLSPNL L + +G+++LL GVGCQ+QA
Sbjct: 123 GQSEDDRFTPVPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIRKLLAIGVGCQIQA 182
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR+VE L L++LYVLG C DN +REGL FL+ S PETV+HYEFMQD+++H +H D
Sbjct: 183 LRAVESTLPLDQLYVLGLPCTDNVSREGLQTFLETTVSSPETVVHYEFMQDFRIHFRHSD 242
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 348
G E VP+F L L +V APSC SCFDYTNA ADLVVGYMG T Q++T
Sbjct: 243 GREETVPFFGLDTPKLKNVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWLT 294
Query: 349 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
VRN RG+++L LV+ L++ P S G R+ V + ++A D A P ++ +I
Sbjct: 295 VRNPRGQQLLDLVEAELDVAPVTSRGQRQAAVQQGIEAYDKALK-------LPIWLAKII 347
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
F+ GP+GLE+ R+S+D H RN L + R +K + H+P++A++I+ Y
Sbjct: 348 GCFVGRFGPQGLEYGRFSIDSHFTRNALWLRRNHPEK-VEAHIPAFAQRIISRYK 401
>gi|452822609|gb|EME29627.1| coenzyme F420 hydrogenase beta subunit [Galdieria sulphuraria]
Length = 485
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 267/412 (64%), Gaps = 37/412 (8%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVH 118
YPAK CS CGLCDT +I +VKD+CAFL +S LE VHG+ R + ++ Y GVH
Sbjct: 98 YPAKSLCSHCGLCDTRFIHYVKDSCAFLNQHISE---LEYTVHGKSRDLEVENELYFGVH 154
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSP 178
++ AR+ +P+ GAQW+GIVT+IA +L+TG V+ +VCV++ D DR P
Sbjct: 155 LNMIAARRKQPLPGAQWSGIVTSIATRLLETGKVQGIVCVRN----------DEQDRFQP 204
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 238
+PVLA TPEE+ A++ KPTLSPNL+ L VEA+G R+ GVGCQV+ALRSV+ L L
Sbjct: 205 KPVLATTPEEIYASRVNKPTLSPNLSVLDTVEASGFTRIGVIGVGCQVEALRSVQSKLGL 264
Query: 239 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI------- 291
EKLYVLGT CVDN TR+GLDKFL+ S+ P+TV+HYEFMQD++VH KH D +
Sbjct: 265 EKLYVLGTPCVDNVTRKGLDKFLRTTSTSPDTVVHYEFMQDFRVHFKHDDKVVGGPGKQW 324
Query: 292 -EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 350
E VP+F L N+L D+ APSC SCFDY N+LADLVVGYMG P Q+I VR
Sbjct: 325 TETVPFFGLKTNELKDIFAPSCLSCFDYVNSLADLVVGYMGAPF--------GWQWIVVR 376
Query: 351 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 410
NE G EML LV + +E P SSG+R V ++ A D P ++ L+
Sbjct: 377 NEIGMEMLDLVSSQIETMPLSSSGNRLQAVQNSIPAYDKG-------MTLPMWIAQLLGV 429
Query: 411 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
I+ +GPKGLE+AR+S+D H RNYL++ R + +H+P YA++I+E Y
Sbjct: 430 VIDKLGPKGLEYARFSIDSHFTRNYLYMKRNF-PNILQRHVPEYARRIIEQY 480
>gi|254432879|ref|ZP_05046582.1| coenzyme F420 hydrogenase [Cyanobium sp. PCC 7001]
gi|197627332|gb|EDY39891.1| coenzyme F420 hydrogenase [Cyanobium sp. PCC 7001]
Length = 381
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 263/405 (64%), Gaps = 29/405 (7%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVH 118
YPAKD CS+CGLCD+ ++A+V+ +CAFL R E +E HGR R D+ D+ Y GVH
Sbjct: 2 YPAKDLCSQCGLCDSRWVAYVRQSCAFL---HQRFEAMEAAAHGRSRDLDNEDELYFGVH 58
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSP 178
+ ++ AR +P+EGAQWTGIV+ I + L+TG+V+AV+CV DR +P
Sbjct: 59 QRMVTARLARPLEGAQWTGIVSRIGVRALETGLVDAVLCV----------GQSEHDRFTP 108
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 238
P LARTPEEVL+A+ KPTLSPNL L + +G++RLL GVGCQ+QALR+V+ L L
Sbjct: 109 VPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIRRLLAIGVGCQIQALRAVQPTLPL 168
Query: 239 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 298
+ LYVLG CVDN +R GL FL++ S PETV+HYEFMQD+++H +H DG E VP+F
Sbjct: 169 DALYVLGLPCVDNVSRAGLQTFLESTVSSPETVVHYEFMQDFRIHFRHSDGRTETVPFFG 228
Query: 299 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
L L DV APSC SCFDYTNA ADLVVGYMG Q+ITVRN G+++L
Sbjct: 229 LDTPKLKDVFAPSCLSCFDYTNAGADLVVGYMGAEFGR--------QWITVRNPLGQQLL 280
Query: 359 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 418
LV+ L++ P S GDRR V + ++A D A P+++ LI F+ GPK
Sbjct: 281 DLVEPELDVAPVTSRGDRRAAVQQGIEAYDKAVK-------LPRWLAELIGVFVQRFGPK 333
Query: 419 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
GLE+ R+S+D H RN L V R +K A+ H+P++A++IV Y
Sbjct: 334 GLEYGRFSIDSHFTRNALWVRRHHPEK-AEAHIPAFARRIVSRYR 377
>gi|116073059|ref|ZP_01470321.1| coenzyme F420 hydrogenase [Synechococcus sp. RS9916]
gi|116068364|gb|EAU74116.1| coenzyme F420 hydrogenase [Synechococcus sp. RS9916]
Length = 381
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/403 (49%), Positives = 262/403 (65%), Gaps = 29/403 (7%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAKD CS CGLCD+ ++A+V+ ACAFL EG+E HGR R D+ D+ Y GV +
Sbjct: 3 PAKDLCSDCGLCDSRWVAYVRQACAFL---HQDFEGMERRYHGRSRDLDNEDELYFGVQQ 59
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
+L AR +P+EGAQWTGIV+ + ++ LKTG+V+AV+CVQ PDDR +P
Sbjct: 60 RMLTARLRQPIEGAQWTGIVSHLGVQALKTGLVDAVLCVQQ----------SPDDRFTPM 109
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
PVLARTPEEV+AA+ KPTLS NL+ L + +G+KRLL GVGCQ+QALRSV+ L L+
Sbjct: 110 PVLARTPEEVMAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQIQALRSVQDTLPLD 169
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
+LYVLG CVDN +REGL+ FL +AS P+TV+HYEFMQD+++H +H DG E VP+F L
Sbjct: 170 ELYVLGLPCVDNVSREGLNTFLNSASDSPDTVVHYEFMQDFRIHFRHRDGREETVPFFGL 229
Query: 300 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
L DV APSC SCFDYTNA ADLVVGYMG Q++ VRN RG ++L
Sbjct: 230 DTPKLKDVFAPSCLSCFDYTNAGADLVVGYMGAEFGR--------QWLVVRNARGAQLLK 281
Query: 360 LVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKG 419
LV+ L+ S GDRR V + + A D A P +V + + + +GPKG
Sbjct: 282 LVEADLDTASVTSRGDRRAAVQQGIDAYDKAL-------KLPMWVAEAVGWVVQRIGPKG 334
Query: 420 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
LE+ R+S+D H RN L V R + +H+P++A+KIVE Y
Sbjct: 335 LEYGRFSIDSHFTRNALWVRRNHSDQYT-RHLPAFARKIVERY 376
>gi|255635378|gb|ACU18042.1| unknown [Glycine max]
Length = 199
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/199 (87%), Positives = 195/199 (97%)
Query: 277 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 336
MQDYK+HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY+
Sbjct: 1 MQDYKIHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYS 60
Query: 337 GISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGP 396
GI MTQHPQY+TVRNERG+EMLSL++NLLEITPTIS+GDRRPFVMETVKADD AK+GRGP
Sbjct: 61 GIGMTQHPQYVTVRNERGREMLSLIENLLEITPTISTGDRRPFVMETVKADDEAKLGRGP 120
Query: 397 SQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 456
SQPAPKF+GNL+AF +NL+GPKGLEFARYSLDYHTIRNYLHVNR WGK+RAD+HMP+YAK
Sbjct: 121 SQPAPKFIGNLLAFILNLIGPKGLEFARYSLDYHTIRNYLHVNRMWGKERADRHMPTYAK 180
Query: 457 KIVEMYNQNGQIDQMLSSK 475
KIV++YNQNGQI++MLS+K
Sbjct: 181 KIVDLYNQNGQIEKMLSNK 199
>gi|423065981|ref|ZP_17054771.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
gi|406712480|gb|EKD07665.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
Length = 330
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 234/336 (69%), Gaps = 21/336 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML +VE VVCVQ+
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQSIVEGVVCVQN------- 120
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
+DR P P+LARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+Q
Sbjct: 121 ---TKEDRFGPMPILARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQ 177
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+VE + LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH
Sbjct: 178 ALRAVEKQMGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHE 237
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I
Sbjct: 238 DGSTETVPFFGLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWI 289
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMET 383
VRN+RG+EML L+++ L+ P S GDRR V ++
Sbjct: 290 VVRNDRGQEMLDLIQDQLDTQPVSSQGDRRAAVQQS 325
>gi|194477230|ref|YP_002049409.1| hypothetical protein PCC_0785 [Paulinella chromatophora]
gi|171192237|gb|ACB43199.1| hypothetical protein PCC_0785 [Paulinella chromatophora]
Length = 404
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/415 (46%), Positives = 271/415 (65%), Gaps = 29/415 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++P+ G PAKD CS CGLCD+ ++A+V+ AC FL R E +E HGR R
Sbjct: 15 ERTRPLSKGKVKPAKDLCSECGLCDSRWVAYVRHACPFLNQ---RFETMELETHGRIRNL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ + Y GVH +L AR KP+ GAQWTGIV+ + I+ LKTG+V+AV+CVQ
Sbjct: 72 DNEKELYFGVHNRMLTARLKKPIAGAQWTGIVSQLGIQALKTGLVDAVLCVQQ------- 124
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
DR +P P+LARTPEEVLAA+ K TLSPNL L + +G+K+LL GVGCQVQ
Sbjct: 125 ---GEQDRFTPVPILARTPEEVLAARVNKATLSPNLEALEQLSGSGIKKLLAIGVGCQVQ 181
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L L++LYVLG CVDN +R GL FL++ S P TV+HYEFMQD+ +H H
Sbjct: 182 ALRAVQSTLPLDELYVLGMPCVDNVSRTGLQTFLESTSKSPNTVVHYEFMQDFYIHFHHS 241
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
+G E + +F L + D+ APSC SCFDY NA ADLV+GYMG K+ Q++
Sbjct: 242 NGSKETISFFGLDTPKVKDIFAPSCLSCFDYVNAGADLVIGYMGA-KFGY-------QWL 293
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
TVRN RG+++LSL+++ L+I P SSGDR V + + A + A P ++ +L
Sbjct: 294 TVRNTRGEKLLSLIESQLDILPVDSSGDRHSAVQQGIDAYNKA-------LKLPIWIASL 346
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+A+++ +GP+GLE++R+S+D H RN L + R +K A++H+P++AKKIV Y
Sbjct: 347 VAWWVKYIGPQGLEYSRFSIDSHFTRNALWLWRHHSEK-AEQHIPAFAKKIVSRY 400
>gi|148241873|ref|YP_001227030.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
RCC307]
gi|147850183|emb|CAK27677.1| Coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
RCC307]
Length = 397
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/416 (47%), Positives = 269/416 (64%), Gaps = 29/416 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++KP+ G PAKD CS CGLCD+ ++A+V+ ACAF+ + E LE HGR R
Sbjct: 7 QKAKPMARGTLRPAKDLCSDCGLCDSRWVAYVRQACAFI---HQQFESLERKAHGRSRDL 63
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GV E + A+ +P+EGAQWTGIV+T+ + L+ +V+AV+CVQ
Sbjct: 64 DNEDELYFGVTERMFCAQLQQPLEGAQWTGIVSTLGVRALEQNLVDAVLCVQQ------- 116
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 227
P+DR +P PVLARTP+EVLAA+ KPTLS NL+ L + +G+KRLL GVGCQ Q
Sbjct: 117 ---SPEDRFTPMPVLARTPQEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQTQ 173
Query: 228 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
ALR+V+ L LE+LYVLG CVDN +REGL FL++ S PETV+HYEFMQD+++H +H
Sbjct: 174 ALRAVQDSLGLEELYVLGMPCVDNVSREGLQTFLESTSRSPETVVHYEFMQDFRIHFRHS 233
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG E VP+F L L DV APSC SCFDY NA ADLVVGYMG P Q++
Sbjct: 234 DGSTETVPFFGLDTPKLKDVFAPSCLSCFDYVNACADLVVGYMGAPFQW--------QWL 285
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 407
VRN+RG+++L LV+ L+ P +SSG R V + + A D A P+++ +
Sbjct: 286 VVRNQRGQKLLDLVEAELKTQPVMSSGQRAQAVQQGIDAYDKALR-------LPRWLAEV 338
Query: 408 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ + VGPKGLE+AR+S+D H RN + R +K A +H+P++A+KIV Y
Sbjct: 339 VGVVVQRVGPKGLEYARFSIDSHFTRNATWLRRHHPEKLA-QHLPAFAQKIVSRYR 393
>gi|87124766|ref|ZP_01080614.1| hypothetical protein RS9917_01052 [Synechococcus sp. RS9917]
gi|86167645|gb|EAQ68904.1| hypothetical protein RS9917_01052 [Synechococcus sp. RS9917]
Length = 386
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 262/408 (64%), Gaps = 29/408 (7%)
Query: 56 GGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYL 115
G PA+D CS CGLCD+ ++A+VK ACAFL E +E HGR R D D+ Y
Sbjct: 4 GTVRPARDLCSDCGLCDSRWVAYVKRACAFLHQD---FEAMERRSHGRSRDLDQEDELYF 60
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDR 175
GVHE ++ AR P++GAQWTGIV+ + + L+ G+V+AV+CVQ P+DR
Sbjct: 61 GVHERMVTARMRAPIDGAQWTGIVSHLGAKALERGLVDAVLCVQQ----------SPEDR 110
Query: 176 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH 235
+P PVLARTPEEV+AA+ KPTLS NL+ L + +G++ LL GVGCQ+QALR+VE
Sbjct: 111 FTPVPVLARTPEEVMAARVNKPTLSNNLSVLEQLPGSGIRNLLAIGVGCQIQALRAVEDT 170
Query: 236 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 295
L L+ LYVLG CVDN +R+GL FL++AS PETV+HYEFMQD+++H +H DG E VP
Sbjct: 171 LPLDALYVLGLPCVDNVSRQGLQTFLESASDSPETVVHYEFMQDFRIHFRHRDGRQETVP 230
Query: 296 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 355
+F L L DV APSC SCFDY NA ADLVVGYMG +Y Q++ VRN+RG
Sbjct: 231 FFGLDTPRLKDVFAPSCLSCFDYVNAGADLVVGYMGA-EYGR-------QWLVVRNQRGA 282
Query: 356 EMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLV 415
+L L++ L++ P S GDRR V + + A D A P ++ L+ + + +
Sbjct: 283 ALLDLIEADLDLAPVTSRGDRRAAVQQGIDAYDKAVR-------LPMWLAELVGWVVQRI 335
Query: 416 GPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
GPKGLE+ R+S+D H RN L + R + D+H+P++A++IVE Y
Sbjct: 336 GPKGLEYGRFSIDSHFTRNALWLRRH-HPEVVDRHLPAFARRIVERYR 382
>gi|254422838|ref|ZP_05036556.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Synechococcus sp. PCC 7335]
gi|196190327|gb|EDX85291.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Synechococcus sp. PCC 7335]
Length = 353
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 245/372 (65%), Gaps = 26/372 (6%)
Query: 91 SRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTG 150
++ LE HGR R D++D+ Y GVH++++ ARK P+EGAQWTGIV+T+AIEML G
Sbjct: 3 QQVSDLEAANHGRARDLDNVDELYFGVHQKMVAARKLAPIEGAQWTGIVSTLAIEMLDRG 62
Query: 151 MVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVE 210
+VE VVCVQ N++ DDR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E
Sbjct: 63 LVEGVVCVQ---------NTE-DDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLDQIE 112
Query: 211 AAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPET 270
+G+KR+L GVGCQ+QALR+V+ + LEKLYVLG CVDN TR GL KFL+ S PET
Sbjct: 113 RSGMKRVLVIGVGCQIQALRAVQDQIGLEKLYVLGMPCVDNVTRAGLQKFLETTSRSPET 172
Query: 271 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYM 330
V+ YEFMQD++VH KH DG E+VP+F L N L DV APSC SCFDYTN+LAD+VVGYM
Sbjct: 173 VVAYEFMQDFQVHFKHEDGSEEKVPFFGLKTNKLKDVFAPSCMSCFDYTNSLADIVVGYM 232
Query: 331 GVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNA 390
G P Q+I VRNE G +M L+ ++E P SSGDR V ++ A D
Sbjct: 233 GAPFGW--------QWIVVRNETGAQMFELLDGIIETQPVESSGDRTQAVQNSIPAYDKG 284
Query: 391 KMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKH 450
P + L+ I +GPKGLE+AR+S+D H RNYL+ R +K A H
Sbjct: 285 VT-------LPMWAAKLMGVVIEKIGPKGLEYARFSIDSHFTRNYLYTRRNHPEKLA-AH 336
Query: 451 MPSYAKKIVEMY 462
+P +AK+IV Y
Sbjct: 337 VPEFAKRIVGQY 348
>gi|223996811|ref|XP_002288079.1| hypothetical protein THAPSDRAFT_14482 [Thalassiosira pseudonana
CCMP1335]
gi|220977195|gb|EED95522.1| hypothetical protein THAPSDRAFT_14482 [Thalassiosira pseudonana
CCMP1335]
Length = 419
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/435 (46%), Positives = 266/435 (61%), Gaps = 47/435 (10%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSR-IEGLETVVHGRGRR----------K 107
+PAK+HCS+CGLC+T Y+ HV DACAFLG+GM R I+G+E VHGR R
Sbjct: 1 FPAKNHCSKCGLCETKYVTHVIDACAFLGEGMKRNIDGMEERVHGRRRNLNDFMSNNDDN 60
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++ D+ GV + + K + AQWTG VT IA+ ML+ GMV+AVVC+ S
Sbjct: 61 NTADEARFGVMHSPMVLARGKQIPNAQWTGCVTGIAVSMLEAGMVDAVVCIAS------- 113
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVE-AAGVKRLLFCGVGCQV 226
S D +P P+LART EEV+ +GVKP L+P+L L +E + VKRLLFCGVGC V
Sbjct: 114 --SGDDGWSNPEPILARTVEEVIRGRGVKPALAPSLRVLEELERSTDVKRLLFCGVGCAV 171
Query: 227 QALRSVEHHLNLEKLYVLGTNCVDN-----GTREGLDKFLKAASSEPETVLHYEFMQDYK 281
QA R++EH L LE++YVLGTNC DN RE L + + S E +T+L YEFMQD++
Sbjct: 172 QAFRAIEHELPLEEVYVLGTNCADNSPTPEAAREFLRRIVPDVSRE-KTILGYEFMQDFR 230
Query: 282 VHLKHLDG-----HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 336
VH+K+ +G E +PYF LP + I+ SC +CFDYTNALAD+VVGYM P +
Sbjct: 231 VHVKY-EGINKILSYERLPYFSLPGDVAEFAISDSCLACFDYTNALADVVVGYMAAPLDS 289
Query: 337 GISMTQHPQYITVRNERGKEMLSLVKNLLEI------TPTISSGDRRPFVMETVKADDNA 390
SM Q Q ITVRN RG+ M V++ LE + SG FV TV AD+
Sbjct: 290 N-SMEQSYQTITVRNSRGELM---VQSALEAGRLTLGSVATGSGSHESFVSATVSADNVV 345
Query: 391 KM---GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA 447
+ G ++ P+FVGN++A + VGPKG+ FARYSLDYH +RNYLHV WG+
Sbjct: 346 QAMVGGELKTEGMPRFVGNIVASVMRAVGPKGVNFARYSLDYHLLRNYLHVIDEWGEG-G 404
Query: 448 DKHMPSYAKKIVEMY 462
+P YA IV+ Y
Sbjct: 405 KSMVPEYATTIVKKY 419
>gi|219113003|ref|XP_002186085.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582935|gb|ACI65555.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 536
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 195/430 (45%), Positives = 267/430 (62%), Gaps = 32/430 (7%)
Query: 52 PIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
PI P G +PAK+HCS+CGLC+T Y+A VK+ACAFL GMSRI+ LET VHGR RRK
Sbjct: 102 PIDPEGRPYKFPAKEHCSKCGLCETSYVARVKEACAFLEPGMSRIDTLETKVHGR-RRKT 160
Query: 109 SLDDTYL-------GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSL 161
+ D T + GV + L + + GAQWTG+V++IAI ML+T V+AV CV
Sbjct: 161 TDDKTIVQADERRFGVQYQPLRLARGISMPGAQWTGVVSSIAISMLETRQVDAVACVA-- 218
Query: 162 VILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFC 220
S+ + +P P+LA+T +EVL +GVKP+L+P+LN L V+ ++RLLFC
Sbjct: 219 --------SNEETWSNPNPILAQTTDEVLKGRGVKPSLAPSLNILDEVKNDPSIRRLLFC 270
Query: 221 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFL--KAASSEPETVLHYEFMQ 278
GVGC VQALRS+E+ L +E +++LGTNCVDN G K A ++V YEFMQ
Sbjct: 271 GVGCSVQALRSIENELGIE-IFILGTNCVDNSPSPGAAAAFIEKGAKVFSDSVRGYEFMQ 329
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
D++VH+K + ++ +PYFCLP IA SC SCFDYTNALAD+VVGYM P
Sbjct: 330 DFRVHVKTEETYL-TIPYFCLPGTIAESSIAKSCRSCFDYTNALADVVVGYMAAPLDGKS 388
Query: 339 SMTQHPQYITVRNERGKEML--SLVKNLLEITPTI-SSGDRRPFVMETVKADDNAKM--- 392
M + Q +TVRNERG +M+ ++ + LE+ + SGD + + T K+D +
Sbjct: 389 RMDESWQTVTVRNERGNQMVETAITQGRLEVGDIVRGSGDHQQLAIATTKSDALVQAMVG 448
Query: 393 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMP 452
G+ P ++GN++A + V KG+ FARYS+DYH +RNY HV WG+ RA P
Sbjct: 449 GKVQENGMPLWLGNIMATVLRKVSAKGIAFARYSIDYHIVRNYFHVLNEWGEHRARSSTP 508
Query: 453 SYAKKIVEMY 462
+A +IV+ Y
Sbjct: 509 QFALEIVDEY 518
>gi|397613578|gb|EJK62303.1| hypothetical protein THAOC_17090 [Thalassiosira oceanica]
Length = 472
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 270/443 (60%), Gaps = 37/443 (8%)
Query: 50 SKPIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSR-IEGLETVVHGRGR 105
S+PI P G +PAKDHCSRCGLC+T Y+++V DACAF+ GM R I+GLE VHGR R
Sbjct: 30 SRPINPDGWPEKFPAKDHCSRCGLCETSYVSNVLDACAFINGGMKRNIDGLEETVHGRTR 89
Query: 106 RKDSLDDTYLGVHEELLYARKTKP-------VEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
D+ + + EE + ++P V GAQWTG V++IA+ ML++ V+AVVC+
Sbjct: 90 CIDNSINGDDSIAEERRFGVMSRPMMLGRGKVAGAQWTGAVSSIAVSMLESKKVDAVVCI 149
Query: 159 QSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRL 217
+ SD +P P+LART ++VL +GVKP L+P+L L L +K+L
Sbjct: 150 AT--------GSD-GGWSNPEPILARTVDDVLRGRGVKPALAPSLRILDELKSDESIKKL 200
Query: 218 LFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG-TREGLDKFLKAA--SSEPETVLHY 274
L+CGVGC VQA R++E L L+K+YVLGT C DN T + FLK S VL Y
Sbjct: 201 LYCGVGCSVQAFRAIEDELGLDKVYVLGTACADNSPTPKAARDFLKKGIPSIGDSNVLAY 260
Query: 275 EFMQDYKVHLKHLDGH---IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 331
EFMQD++VH+K D +++PYF L + IA SC +CFDYTNALAD+VVGYMG
Sbjct: 261 EFMQDFRVHVKVGDEKSPSYKKLPYFSLEPSVAEFAIADSCLACFDYTNALADVVVGYMG 320
Query: 332 VPKYTGISMTQHPQYITVRNERGKEML--SLVKNLLEITPTI-SSGDRRPFVMETVKADD 388
P M ++ Q ITVRN RG+EM+ ++ LE+ T G F M TV A+D
Sbjct: 321 APLVD--DMDRNMQTITVRNNRGEEMIRCAIDGERLELGGTARGEGTHEKFAMSTV-AND 377
Query: 389 N--AKMGRG--PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGK 444
N KM G + P FVGN+IA +GPKG+ FARYS+DYH +RNYLH R +G+
Sbjct: 378 NLVNKMTGGDVKEKGMPPFVGNIIASIATKLGPKGVAFARYSIDYHILRNYLHCLREFGR 437
Query: 445 KRADKHMPSYAKKIVEMYNQNGQ 467
RAD +P Y + I++ Y ++ Q
Sbjct: 438 DRADTMIPEYTRVIIKEYEESDQ 460
>gi|440755865|ref|ZP_20935066.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Microcystis aeruginosa TAIHU98]
gi|440173087|gb|ELP52545.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Microcystis aeruginosa TAIHU98]
Length = 295
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 209/317 (65%), Gaps = 26/317 (8%)
Query: 146 MLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNT 205
ML G+VE VVCVQ+ +DR P+P+LART EE+LAAK KPTLSPNL+
Sbjct: 1 MLDRGLVEGVVCVQNTA----------EDRFQPQPILARTTEEILAAKVNKPTLSPNLSV 50
Query: 206 LALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAAS 265
L +E +G+KRLL GVGCQ+QALR+VE L LEKLYVLGT CVDN TR GL KFL+ S
Sbjct: 51 LEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTS 110
Query: 266 SEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADL 325
PETV+HYEFMQD++VH KH DG +E VP+F L N L DV APSC +CFDY N+LADL
Sbjct: 111 RSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADL 170
Query: 326 VVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVK 385
VVGYMG P Q+I VRN+ GKEML LVK+ L +SSGDR+ V ++
Sbjct: 171 VVGYMGAPF--------GWQWIVVRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIP 222
Query: 386 ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKK 445
A D P + ++ I +GPKGLE+AR+S+D H RNYL+V R + +K
Sbjct: 223 AYDKGVT-------LPMWAAKMMGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEK 275
Query: 446 RADKHMPSYAKKIVEMY 462
A H+P YAKKIVE Y
Sbjct: 276 LA-AHVPEYAKKIVEQY 291
>gi|147799603|emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]
Length = 240
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 160/177 (90%), Gaps = 10/177 (5%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
KSVKLR+DWR+RS+PIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 30 KSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLE 89
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
+VHGRGR+ SLD+TYLGV+E+LLYARKT+PVEGAQWTGIVTTIAIEMLK GMVEAV+C
Sbjct: 90 PLVHGRGRKDYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVIC 149
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV 214
VQ SDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVE GV
Sbjct: 150 VQ----------SDPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEIDGV 196
>gi|556606|gb|AAA50354.1| ORF, partial [Nostoc sp. PCC 7120]
Length = 265
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 186/274 (67%), Gaps = 20/274 (7%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE R R
Sbjct: 8 QKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQARQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
D+ D+ Y GVH++++ A+K +P+ GAQWTGIV++IAIEML G+VE VVCVQ+
Sbjct: 65 DNPDELYFGVHQDMIAAKKQQPIAGAQWTGIVSSIAIEMLNHGLVEGVVCVQN------- 117
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS---PNLNTLALVEAAGVKRLLFCGVGC 224
+DR P PV+ARTP ++ KPTLS P N+ +G+KRLL GVGC
Sbjct: 118 ---SKEDRFQPMPVIARTPRRNTSSCVNKPTLSQTFPYWNS----RKSGMKRLLVIGVGC 170
Query: 225 QVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
Q+QALR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD+++H
Sbjct: 171 QIQALRAVEKKLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHF 230
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDY 318
KH DG IE+VP+F L N L DV APSC SCFDY
Sbjct: 231 KHEDGSIEKVPFFGLKTNQLKDVFAPSCMSCFDY 264
>gi|381160641|ref|ZP_09869873.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiorhodovibrio
sp. 970]
gi|380878705|gb|EIC20797.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiorhodovibrio
sp. 970]
Length = 453
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 229/432 (53%), Gaps = 52/432 (12%)
Query: 32 PSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMS 91
P+K + L +D R R +P CS CGLCD+ + + +C F+
Sbjct: 43 PAKGLREPTLLSKDERLRGRP----------KLCSDCGLCDSQFKPLMASSCTFV---RQ 89
Query: 92 RIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGM 151
+ +E +HGR RR+ D+ G+ + AR +P GAQW+G+VT++ +L+TG
Sbjct: 90 HVPEIEQRLHGRERREG--DELRFGIFRAMYGARMRQPASGAQWSGMVTSLGAALLETGQ 147
Query: 152 VEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA 211
VE V+ + P R +PRPVLARTP+ V A+ G KP LSPNL L V A
Sbjct: 148 VEGVITAAAA----------PGTRFAPRPVLARTPDAVRASAGNKPCLSPNLALLDEVRA 197
Query: 212 AGVKRLLFCGVGCQVQALRSVE----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSE 267
AG+KRL F G GCQVQ LR+ E + LE L V+G C DN T L FL S
Sbjct: 198 AGIKRLAFIGTGCQVQILRAAEPQLREQMGLEHLDVIGIPCSDNVTYPDLQFFLTQVSRS 257
Query: 268 PETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 327
PET++HYEFMQDY++ ++H DG IE V + P + L V +C SCFDY N+LAD+ +
Sbjct: 258 PETIVHYEFMQDYRLWMRHDDGDIERVNFIDFPMDKLDGVFPSACLSCFDYANSLADITI 317
Query: 328 GYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD 387
GYMG G Q++ VR ERG+ ML L+K LE S+GDR + ++
Sbjct: 318 GYMGA--RLGW------QWVLVRTERGQAMLDLIKPQLEFRELDSAGDRNRGMPRYIRM- 368
Query: 388 DNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA 447
+ P +P PK + LIAF GP+GLEFAR ++ +RN ++
Sbjct: 369 ----LAEPPGKP-PKPIRRLIAFLQRRRGPRGLEFARAVIEMKLLRNLQYLR-------- 415
Query: 448 DKHMPSYAKKIV 459
H P + +++V
Sbjct: 416 -SHFPRFEQRVV 426
>gi|163848106|ref|YP_001636150.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chloroflexus
aurantiacus J-10-fl]
gi|222526003|ref|YP_002570474.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|10198145|gb|AAG15211.1|AF288460_4 FrhB [Chloroflexus aurantiacus]
gi|163669395|gb|ABY35761.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449882|gb|ACM54148.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus sp. Y-400-fl]
Length = 429
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 222/401 (55%), Gaps = 29/401 (7%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + +C F+ + R E +E +HGR RR D+ G++ +L
Sbjct: 38 CSDCGICTGELRPFMAQSCVFVNN---RAEEIERRLHGRNRRDG--DELLFGIYRDLRVF 92
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R PV AQW+G VT++ +L+ G+VE V+ ++ P R +P P+LAR
Sbjct: 93 RMRPPVPDAQWSGAVTSLGALLLEHGLVEGVITTGAV----------PGTRYAPLPILAR 142
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
TP+EV A +G KP L+P L+ L V +G++R+ + G GCQV ALR++E L LE+LYV+
Sbjct: 143 TPDEVRATRGNKPCLAPTLDVLTQVRQSGLRRIAYIGTGCQVHALRAIEDQLGLERLYVI 202
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN T L +FL+ S PETV+H+EFMQD+++ LKH DG +E+V + L + L
Sbjct: 203 GIPCTDNTTYPDLQRFLQVVSRSPETVIHHEFMQDFRIWLKHEDGSVEKVNFVDLDVDRL 262
Query: 305 ---VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
+ V P+C SCFDY N L+DL +GYMG P + + Q+ +R ERG E+ L+
Sbjct: 263 GGQLGVFPPACLSCFDYQNGLSDLTIGYMGAP----LPPDERWQWTLIRTERGAELYDLL 318
Query: 362 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 421
++ +E IS GDR T +M R P + P + L+AF GPKGLE
Sbjct: 319 RSHVEEREPISGGDR------TRGMPAYIQMLRQPRKRPPWPIRQLVAFIQRRSGPKGLE 372
Query: 422 FARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
FAR ++ +RN V G+ + +P Y + + Y
Sbjct: 373 FARSVIEMKLLRNLQFVRERHGRL-ERRIVPGYVYRALARY 412
>gi|347756039|ref|YP_004863602.1| Coenzyme F420-reducing hydrogenase subunit beta [Candidatus
Chloracidobacterium thermophilum B]
gi|347588556|gb|AEP13085.1| Coenzyme F420-reducing hydrogenase, beta subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 433
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 233/404 (57%), Gaps = 28/404 (6%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + HVK+ACAFL + + + LE V G RR + D+ Y G ++++L
Sbjct: 20 CSDCGICTSSLRPHVKEACAFL---VQKYDELELTVQGHARRAGT-DEVYFGPYKKILRV 75
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R+ +P+ GAQWTG+VTTIA+ L+ G+VE V+ ++P P+PVLAR
Sbjct: 76 RRQRPIAGAQWTGVVTTIAMRALEQGLVEGVILT----------GTEPGTLNKPQPVLAR 125
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
TPEEVLA +G K LSP L + AAG+KR++ G CQ ALR +E L ++L+ L
Sbjct: 126 TPEEVLACRGNKFGLSPTLEKIDDAIAAGLKRVMVVGTPCQFHALRVIESTLPFDELWCL 185
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN T E FLK+ S P+TV+H EFM D+++ ++H +G +E++ + +P +++
Sbjct: 186 GILCSDNTTHENYMTFLKSVSRSPDTVVHMEFMPDFRLWMRHTNGEVEKLNFVEIPMHEI 245
Query: 305 -VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 363
D+IAPSC CF+YTN+LADL VGYMG Q++ +RN +G +L L+++
Sbjct: 246 GPDLIAPSCRVCFNYTNSLADLSVGYMG-------GGMPDNQWLLIRNAKGWRLLDLIRD 298
Query: 364 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 423
+E++ SG R M+ +++G+ ++ AP+ V LIAF GP+GLEFA
Sbjct: 299 DVELSEPTESGS-RALAMKGFL----SQLGKPYTKGAPRPVKKLIAFLQRRFGPRGLEFA 353
Query: 424 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
R ++ V R G + A +P YA +E Y G+
Sbjct: 354 RTRVEMKLAEGLFTVRRKAGHREA-LLVPRYAYVPLEKYVLPGE 396
>gi|193214920|ref|YP_001996119.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088397|gb|ACF13672.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroherpeton thalassium ATCC 35110]
Length = 418
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 233/409 (56%), Gaps = 29/409 (7%)
Query: 65 CSRCGLCD--TYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS CGLC ++ +C F + + GLE+ + GR R +S +++ G+ ++
Sbjct: 24 CSSCGLCSVKSWPAKESIQSCVF---RVGWLGGLESELFGRERNPNSFEESRFGITKKRF 80
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
A+ P+ AQW+GI+T I + L++G VE VV VQ NS DD P+PVL
Sbjct: 81 VAQLKNPIPHAQWSGIITRICTKALESGFVEGVVAVQ---------NSQ-DDIFVPKPVL 130
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV---EHHLNLE 239
A + +V AKG KP L+P L +L +KRLL G C V LR +L
Sbjct: 131 ATSTADVFKAKGNKPALAPALLSLGEAYEKKLKRLLVVGAPCHVHILRDFVKRSPYLKDA 190
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
++YVLG C DN E L L+ SS +T+ HYEFMQD++VHLKH +G IE+VPYF L
Sbjct: 191 EIYVLGIPCTDNVKPEKLRWILERISSSHQTLCHYEFMQDFQVHLKHDNGRIEKVPYFSL 250
Query: 300 PAN-DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
P + V APSC SCFDY N+L+DL VGY+G P + Q++ +R E+G+E+L
Sbjct: 251 PQELSQIGVFAPSCMSCFDYVNSLSDLTVGYLGAP----FMPNEKRQWVLLRTEKGEELL 306
Query: 359 SLVKNLLEITPTISSGDRRPFV-METVKADDNAKMG-RGPSQPA---PKFVGNLIAFFIN 413
V++ L+ P +SGD R V M + + K+G + P++ P +VG LI + ++
Sbjct: 307 KFVEDELDTYPEETSGDAREAVKMNVERTIEQLKLGNKAPAKTGRRIPIWVGKLITYMMS 366
Query: 414 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
GPKGLEFARY++D+H +RNY +V + +K + +P + K++E Y
Sbjct: 367 KKGPKGLEFARYTIDFHILRNYYYVKLFYPEK-FETIVPKHVYKVLEEY 414
>gi|288940912|ref|YP_003443152.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896284|gb|ADC62120.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Allochromatium vinosum DSM 180]
Length = 423
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 223/434 (51%), Gaps = 40/434 (9%)
Query: 30 SSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDG 89
+ PSK + L D R + +P CS CGLCD+ + AC F+ +
Sbjct: 11 TGPSKGLATISLLSSDERLKGRP----------KLCSDCGLCDSTLKGRMSSACIFVRNQ 60
Query: 90 MSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKT 149
+ IE +HGR RR D D+ G+H AR +P AQW+GIVT++ +L+
Sbjct: 61 TAEIE---QRLHGRARRPD--DERRFGIHRTQYAARMRRPNPQAQWSGIVTSLGARLLEQ 115
Query: 150 GMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALV 209
G VEAV+ + P R PVLARTP EVLA G KP LSPNL L V
Sbjct: 116 GRVEAVITT----------GAAPGTRFKSEPVLARTPAEVLATAGNKPCLSPNLRLLDQV 165
Query: 210 EAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPE 269
G+KRL F G CQV LR+VE L LEKLYV+G C DN T L+ FL S P+
Sbjct: 166 REQGIKRLAFIGTSCQVHMLRAVEAELGLEKLYVIGIPCSDNVTYPDLEYFLTQVSRSPQ 225
Query: 270 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
T++HYEFMQD+ + ++H DGH E V Y P + L + SC SCFDY N L DL VGY
Sbjct: 226 TIVHYEFMQDFSLWMRHEDGHKERVNYIDFPMDKLHGIFPSSCLSCFDYPNTLCDLTVGY 285
Query: 330 MGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDN 389
MG Q++ R E G+E+ L++ LEI SSGDR + +
Sbjct: 286 MGA--------ELGWQWVLARTEIGEELFELIRPDLEIGELTSSGDRTRGMPHYI----- 332
Query: 390 AKMGRGPSQPAPKF-VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRAD 448
A++ + P P F V L+A+ G KGLEFAR ++ +RN +V + + A
Sbjct: 333 ARLTQPPGAKKPPFLVRKLVAYMQRKKGSKGLEFARAIIEMKLLRNLNYVRSKFPRFEA- 391
Query: 449 KHMPSYAKKIVEMY 462
+ +P + + +E Y
Sbjct: 392 RVVPEHVYQTLEPY 405
>gi|147799602|emb|CAN75142.1| hypothetical protein VITISV_038426 [Vitis vinifera]
Length = 366
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/250 (58%), Positives = 164/250 (65%), Gaps = 50/250 (20%)
Query: 210 EAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPE 269
+AAGVKRLLFCGVGCQVQALRSVE HLNL+KLYVLGTNCVDNGTREGLDKFL AASSEPE
Sbjct: 94 KAAGVKRLLFCGVGCQVQALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPE 153
Query: 270 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALA+
Sbjct: 154 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALAE----- 208
Query: 330 MGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDN 389
KY + + + + IT + G + K D
Sbjct: 209 ----KYCNVLLLREVTWYAY-----------------ITSGLGGGIHGCAKIPWSKHDTT 247
Query: 390 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKK---- 445
+ + SQ +GPKGLEFARYSLDYHTIRNY++VNR WGK+
Sbjct: 248 STI--CDSQ----------------IGPKGLEFARYSLDYHTIRNYIYVNRMWGKQSGVC 289
Query: 446 --RADKHMPS 453
R H P+
Sbjct: 290 KTRVQGHSPT 299
>gi|309790871|ref|ZP_07685415.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillochloris trichoides DG-6]
gi|308227158|gb|EFO80842.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillochloris trichoides DG6]
Length = 408
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 225/401 (56%), Gaps = 29/401 (7%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + Y + C F+ + R E +E +HGR R + D+ G++
Sbjct: 20 CSDCGICSSSYRPMLPQVCMFVEN---RAEQIERKLHGRNR--NDGDELLFGIYRSRHVI 74
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R KP AQW+G+VT++ +L+ GMVEAV+ ++ P +P PVLAR
Sbjct: 75 RMAKPNLDAQWSGVVTSLGALLLERGMVEAVITTMAV----------PGTHHAPLPVLAR 124
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
TPEEV A+ KP LSPNL+ L V +GVKRL F G CQV ALR++E HL LEKLYV+
Sbjct: 125 TPEEVRASARNKPCLSPNLDLLDQVRESGVKRLAFIGTSCQVHALRAIEDHLGLEKLYVI 184
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN L +FL+ AS P+T++H+EFMQD++V ++H DGHIE++ Y L + L
Sbjct: 185 GIPCTDNVAYPDLLRFLQIASKSPDTIVHHEFMQDFRVWMRHEDGHIEKINYVDLDVSAL 244
Query: 305 ---VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
+ + +C SCFDY N+LAD+ VGY+ P + + Q+ VR + G+E+ L+
Sbjct: 245 GGELAIFPAACLSCFDYQNSLADITVGYLSAP----LPPPERWQWTMVRTKAGEELFELI 300
Query: 362 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 421
+ LE+ G+R+ V E V +M + P + P + LIA+ GP+G+E
Sbjct: 301 RPFLEVGTLSERGNRQVGVSEYV------RMLKRPRKRPPFPIRKLIAWMQRNRGPRGME 354
Query: 422 FARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
FAR ++ +RN +V A G+ + +P Y + + Y
Sbjct: 355 FARSVIEMKLLRNLQYVRDAHGRL-ERRIVPDYVYRALATY 394
>gi|344342959|ref|ZP_08773829.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Marichromatium purpuratum 984]
gi|343805511|gb|EGV23407.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Marichromatium purpuratum 984]
Length = 420
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 232/446 (52%), Gaps = 44/446 (9%)
Query: 23 SSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDA 82
S++ + PSK + L D R + +P CS CGLCD+ + A
Sbjct: 3 QSAAPVAEGPSKGMGQISLLSNDDRLKGRP----------RLCSDCGLCDSALKPQMTQA 52
Query: 83 CAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTI 142
C F+ + + + +E + GR R D+ G + AR P GAQW+G+VTT+
Sbjct: 53 CMFVNN---QTDAIEQRLFGRSRGDG--DELLFGCYRATYAARMRAPRPGAQWSGMVTTL 107
Query: 143 AIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 202
+L+ G VEAV+ + P R +P+LARTPEEVLA G KP+LSPN
Sbjct: 108 GARLLERGEVEAVITTAAA----------PGTRFKAQPILARTPEEVLATAGNKPSLSPN 157
Query: 203 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 262
L L LV G+KRL F G GCQV ALR++E L LE LYV+G C DN + L+ FL+
Sbjct: 158 LGLLDLVREQGIKRLAFIGTGCQVHALRAIEAELGLEALYVIGIPCSDNVSYPDLEYFLE 217
Query: 263 AASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNAL 322
S P TV+H+EFMQD+ + L+H DG +E V Y P + L + +C SCFDY NAL
Sbjct: 218 QISRSPATVVHHEFMQDFSLWLRHEDGTVERVNYIDFPMDKLHGIFPSACLSCFDYPNAL 277
Query: 323 ADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR---PF 379
+DL +GYMG Q++ R ERG++M +++ LE GDR P
Sbjct: 278 SDLTIGYMGA--------ELGWQWVMARTERGEQMFEMLRPDLEFGTLTEGGDRTRGMPR 329
Query: 380 VMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVN 439
ME + N G G +P P + L+ + GP+GLEFAR ++ +RN HV
Sbjct: 330 FMERL----NHPPGTG--RP-PLLIRKLVVWLQRNRGPRGLEFARAVIEMKLLRNLNHV- 381
Query: 440 RAWGKKRADKHMPSYAKKIVEMYNQN 465
R+ +++ + +P + + + Y ++
Sbjct: 382 RSKFERQESRVVPGFVYRALAPYAEH 407
>gi|390950184|ref|YP_006413943.1| coenzyme F420-reducing hydrogenase subunit beta [Thiocystis
violascens DSM 198]
gi|390426753|gb|AFL73818.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiocystis
violascens DSM 198]
Length = 421
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 226/445 (50%), Gaps = 44/445 (9%)
Query: 23 SSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDA 82
++++ PSK + L D R + +P CS CGLCD+ + A
Sbjct: 4 AATAPLEEGPSKGFGQITLLSHDDRLKGRP----------RLCSDCGLCDSALKPSMPQA 53
Query: 83 CAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTI 142
C F+ + R + +E +HGR R+ D D+ G++ AR +P AQW+GIVT +
Sbjct: 54 CMFVDN---RTQAIEQRLHGRNRQPD--DELRFGIYRAQYAARMRRPNPQAQWSGIVTAL 108
Query: 143 AIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 202
+L+ G VEAV+ + P R +P+LART EVLA G KP LSPN
Sbjct: 109 GARLLEQGKVEAVITT----------GAAPGTRFKAQPILARTAAEVLATAGNKPCLSPN 158
Query: 203 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 262
L+ L V G+KRL G CQV ALR+VE L LE+LYV+G C DN E L FL
Sbjct: 159 LSLLDSVREQGIKRLALIGTSCQVHALRAVEAELGLEQLYVIGIPCSDNVAYEDLTYFLT 218
Query: 263 AASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNAL 322
S PETV+H+EFMQD+ + ++H DGH+E + + P + L + +C SCFDY NAL
Sbjct: 219 QVSRSPETVVHHEFMQDFSLWMRHEDGHVERLNFVDFPMDKLHGIFPSACLSCFDYPNAL 278
Query: 323 ADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR---PF 379
+DL VGYMG Q++ R ERG+E+ L++ LEI GDRR P
Sbjct: 279 SDLTVGYMGAELGW--------QWVLARTERGEELFELMRPDLEIGELTERGDRRRGMPR 330
Query: 380 VMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVN 439
ME + AK P + L+A GP GLEFAR ++ +RN +V
Sbjct: 331 FMERLTHPPGAKR-------PPFLIRKLVAMLQRRKGPGGLEFARAVIEMKLLRNLNYVR 383
Query: 440 RAWGKKRADKHMPSYAKKIVEMYNQ 464
+ + + +P + + +E Y +
Sbjct: 384 GKFARLEP-RVVPYHVYQTLEPYAE 407
>gi|219850322|ref|YP_002464755.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219544581|gb|ACL26319.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus aggregans DSM 9485]
Length = 429
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 221/401 (55%), Gaps = 29/401 (7%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + +C F+ + R E +E +HGR R D+ G++ EL
Sbjct: 38 CSDCGICTGDLRPLMAQSCVFVNN---RAEEIERRLHGRNRHDG--DELLFGIYRELHVF 92
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R PV GAQW+G VT++ +L+ G+VE V+ ++ P R +P P+LAR
Sbjct: 93 RMKPPVPGAQWSGAVTSLGALLLERGLVEGVITTGAV----------PGTRYAPLPILAR 142
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
TP+EV A +G KP L+P L+ L V AG++R+ + G GCQV ALR++E L LE+LYV+
Sbjct: 143 TPDEVRATRGNKPCLAPTLDVLTQVRQAGLRRIAYIGTGCQVHALRAIEDQLGLERLYVI 202
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN T L +FL+ S P+TV+H+EFMQD+++ LKH DG +E+V + L L
Sbjct: 203 GIPCTDNTTYPDLQRFLQVVSRSPDTVVHHEFMQDFRIWLKHEDGSVEKVNFVDLDVARL 262
Query: 305 ---VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
+ V P+C SCFDY N L+DL +GYMG P + + Q+ VR ERG E+ +L+
Sbjct: 263 GGEIGVFPPACLSCFDYQNGLSDLTIGYMGAP----LPPDERWQWTLVRTERGVELFNLL 318
Query: 362 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 421
+ +E IS GDR T +M R P + P + L+AF GPKGLE
Sbjct: 319 RPYIEERAPISGGDR------TRGMPAYIQMLRKPRRRPPWPIRQLVAFIQRRSGPKGLE 372
Query: 422 FARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
FAR ++ +RN V G+ + +P Y + + Y
Sbjct: 373 FARSVIEMKLLRNLQFVRERHGRL-ERRIVPGYVYRALARY 412
>gi|344337911|ref|ZP_08768844.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiocapsa marina 5811]
gi|343801965|gb|EGV19906.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiocapsa marina 5811]
Length = 428
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 214/404 (52%), Gaps = 36/404 (8%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG CD+ + C F+ + + G+E +HGR R+ ++ G++ + A
Sbjct: 36 CSDCGFCDSSLKLLMSQTCTFVRN---QTRGIEQRLHGRSRQGG--EEGRFGIYRAMYAA 90
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R +P AQW+G+VTT+ +L+ G V+AV+ + P R +P+LAR
Sbjct: 91 RMARPNPHAQWSGMVTTLGARLLEQGKVDAVITTAAA----------PGTRFKAQPILAR 140
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
TP+EVLA G KP LSP L+ + V G+KRL G GCQV LR+ E L LE+LYV+
Sbjct: 141 TPQEVLATAGNKPCLSPALSLIDAVREQGIKRLAVVGTGCQVHQLRAAEAELGLERLYVI 200
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN + L+ FL S PETV+H+EFMQD+ + ++H DGH+E + Y P + L
Sbjct: 201 GIPCSDNVSYPDLEYFLTQVSKSPETVVHHEFMQDFSLWMRHEDGHVERLNYIDFPMDKL 260
Query: 305 VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNL 364
+ SC SCFDY N L+D+ +GYMG P Q++ VR G+E+ +++
Sbjct: 261 HGIFPSSCLSCFDYANTLSDITIGYMGAPLGW--------QWVMVRTPTGEELFEMLRPE 312
Query: 365 LEITPTISSGDRR---PFVMETVKADDNAKMGRGPSQPAPKF-VGNLIAFFINLVGPKGL 420
LEI SGDR P ME ++ P Q P + L+A GPKGL
Sbjct: 313 LEIGALTESGDRNRGMPRYME--------RLSHPPGQKRPPMPIRKLVAMLQRTRGPKGL 364
Query: 421 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQ 464
EFAR ++ +RN +V R+ K + +P + + +E Y +
Sbjct: 365 EFARAVIEMKLLRNLNYV-RSKFPKFESRVVPYHVYETLEPYAE 407
>gi|189347280|ref|YP_001943809.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chlorobium limicola DSM 245]
gi|189341427|gb|ACD90830.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium limicola DSM 245]
Length = 416
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 221/425 (52%), Gaps = 40/425 (9%)
Query: 54 PPGGTYPAKDH--CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDS 109
PP P D CSRCGLC + + A +C F + E + GR R
Sbjct: 4 PPKLENPRFDEPLCSRCGLCMGNAWATAESLKSCVF---NTGWLGAHEERLFGRTRNMHD 60
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYN 169
D+ G+ E A KP+EGAQW+GI+T I+ E L+TG+V+ VV +Q
Sbjct: 61 ADELRFGISRERFNAVMKKPLEGAQWSGIITAISTEALQTGLVDGVVTLQGTT------- 113
Query: 170 SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL 229
P+ VLA T EE+ AA+G KP LSP L L VK+LL G C V L
Sbjct: 114 ------FQPKAVLATTAEEIHAARGNKPVLSPVLQALHTAWKKKVKKLLVVGASCHVHVL 167
Query: 230 R---SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH 286
R + L+ +L V+G C DN L + S P+TVL++EFMQDYKVH+ H
Sbjct: 168 RDFAATHPWLDGIELLVVGIPCTDNLEPAHLKWVFRHISRSPDTVLNFEFMQDYKVHIVH 227
Query: 287 LDGHIEEVPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 345
G +E++P+F LPA L V V + SC SCFDY N+LAD+ VGY G P YT Q
Sbjct: 228 STGKVEKIPFFSLPAAVLKVGVFSNSCMSCFDYINSLADITVGYFGAP-YTA---DGKEQ 283
Query: 346 YITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMG-------RGPSQ 398
+I +R ++GK++ LVKN + + P SGD VKA +G G +
Sbjct: 284 WILIRTDKGKKLFDLVKNDISVRPETGSGDS----FGAVKASIQPTIGPILQPHLLGDRR 339
Query: 399 PAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKI 458
P F G L++ GP+G+EFARYS+D H +RNY V R + +R D +P + + +
Sbjct: 340 SMPLFFGKLLSALKAKKGPRGIEFARYSIDIHALRNYFFV-RHYTPERLDVLVPEHIRHL 398
Query: 459 VEMYN 463
V++YN
Sbjct: 399 VKLYN 403
>gi|374623268|ref|ZP_09695781.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Ectothiorhodospira sp. PHS-1]
gi|373942382|gb|EHQ52927.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Ectothiorhodospira sp. PHS-1]
Length = 398
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 216/406 (53%), Gaps = 27/406 (6%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P +D C+ CGL T AC F+ R + LET VHGR R D D+ + G +
Sbjct: 8 PHRDLCTDCGLSRTADPRRCGRACQFI---HPRYDRLETQVHGRARNPDQEDELFFGPYR 64
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
+L A P +GAQWTGI T I +L+TG V+AV+ + +DP DR P+
Sbjct: 65 RMLQAAMNTPRDGAQWTGITTRIGERLLETGQVDAVLTM----------TADPQDRWRPQ 114
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P+L E++ +G++ +P L L A G +RL G+ CQ+ ALR++E L+L+
Sbjct: 115 PILVTRAEDMARCRGMRMGYAPLLAHLEPALAQGYRRLAVIGLPCQIYALRAIEPELDLD 174
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
L+V+GT C DN T E +FL + PETV + EF DY V L+ DG ++ +P+ L
Sbjct: 175 ALHVIGTPCSDNTTTEHFHEFLALLADRPETVTYLEFRADYHVELRFEDGRVQTIPFLKL 234
Query: 300 PANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
P + L D +C +C DYTN LAD+ VGYM + Q++ VRNE+G+ +L
Sbjct: 235 PISKLPRDFFPLTCQTCVDYTNVLADITVGYMA---------GRGEQWLVVRNEKGEALL 285
Query: 359 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 418
L+ + + P S+G R+ V +K + A G P + P + L AF + +GP+
Sbjct: 286 DLLGDEVRTAPCTSAGKRQGPVKGFMKNTERAAGGL-PLRGMPDWARPLAAFLMPRIGPR 344
Query: 419 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHM-PSYAKKIVEMYN 463
GLEFAR ++ + LH+ RA + KHM P + ++V+ Y
Sbjct: 345 GLEFARARVEMKAVETVLHLRRAQPGRM--KHMIPDHVWQLVKPYE 388
>gi|345873334|ref|ZP_08825247.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodococcus drewsii AZ1]
gi|343917293|gb|EGV28098.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodococcus drewsii AZ1]
Length = 424
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 218/402 (54%), Gaps = 30/402 (7%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CGLCD+ + AC F+ ++ + +E +HGR R+ D+ G+H A
Sbjct: 36 CSDCGLCDSALSQMMPQACVFV---RNQTQSIEQRLHGRNRQPG--DELRFGIHRAQYAA 90
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R +P AQW+G++TT+ +L+ G VEAV+ + P R PVLAR
Sbjct: 91 RMRRPNPKAQWSGMITTLGARLLEQGKVEAVITT----------GAAPGTRFKAEPVLAR 140
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
TPEEVLA G KP LSPNLN + + G+KRL F G CQV +LR++E L LE+LYV+
Sbjct: 141 TPEEVLATAGNKPCLSPNLNLIDQIRDQGIKRLAFIGTSCQVHSLRAIEAELGLERLYVI 200
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN T L+ FL S P+TV+H+EFMQD+ + L+H +G +E V Y P + L
Sbjct: 201 GIPCSDNVTYPDLEYFLTQISRSPKTVVHHEFMQDFSLWLRHENGKVERVNYIDFPMDKL 260
Query: 305 VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNL 364
+ +C SCFDY N+L DL VGYMG Q++ VR E G+E+L L+K
Sbjct: 261 HGIFPSACLSCFDYPNSLCDLTVGYMGA--------ELGWQWVLVRTETGEELLELLKPD 312
Query: 365 LEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKF-VGNLIAFFINLVGPKGLEFA 423
LE + GDR + + + A++ P P F + L+A+ GPKGLEFA
Sbjct: 313 LEFSELTEGGDRSRGMPKFI-----ARLTHPPGAKKPPFLIRRLVAYLQRKKGPKGLEFA 367
Query: 424 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQN 465
R ++ +RN +V + + + + +P + + +E Y +
Sbjct: 368 RAIIEMKLLRNLNYVRSKFARVES-RVVPYHVYQALEPYAET 408
>gi|86751131|ref|YP_487627.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris HaA2]
gi|86574159|gb|ABD08716.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris HaA2]
Length = 410
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 213/403 (52%), Gaps = 25/403 (6%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
++ C+ CG+ AC F+ +E VHGR R D+ + G H +
Sbjct: 22 RELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMELQVHGRNRDPSKPDEAFFGPHRRM 78
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
L A +P EGAQWTGI T IA +L+TG V+AV+ + DP D+ P PV
Sbjct: 79 LQAAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAP----------DPADKWKPMPV 128
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 241
L +PE + +G++ +P+L L AAG KR+ G+ CQV ALRS+E L E+L
Sbjct: 129 LVTSPEGMAQCRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLERKLGFERL 188
Query: 242 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 301
YV+GT C DN T E +FL S PET+ + EF DY V L+ DG ++ +P+ LP
Sbjct: 189 YVIGTPCSDNTTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQAIPFLLLPI 248
Query: 302 NDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 360
+ L D +C +C DYTN LAD+ VGYM + Q++ VRN+RG+E+L L
Sbjct: 249 SKLKPDFFPITCRTCVDYTNTLADITVGYMA---------GRGEQWLLVRNQRGEELLDL 299
Query: 361 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 420
+ + + ++ S+G+R V +K + A G P + P ++ + + + VGP+GL
Sbjct: 300 LGDEVRLSEPTSAGNRTAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGL 358
Query: 421 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
EF R ++ + LH+ R + K++ +P++ +V+ Y
Sbjct: 359 EFGRARVEMKAVETVLHLRRNY-KQKIKNMVPAHVWALVKPYG 400
>gi|39934573|ref|NP_946849.1| coenzyme F420 hydrogenase subunit beta [Rhodopseudomonas palustris
CGA009]
gi|39648422|emb|CAE26943.1| possible coenzyme F420 hydrogenase beta subunit [Rhodopseudomonas
palustris CGA009]
Length = 409
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 219/415 (52%), Gaps = 25/415 (6%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R + D+
Sbjct: 13 PPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMERRVHGRNRDAATGDEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G + ++ A +P EGAQWTGI TTIA +L+TG V+AV+ + DP
Sbjct: 70 FFGPYRRMVQAAMKQPREGAQWTGITTTIAQRLLETGAVDAVIAMAP----------DPS 119
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D+ P PVL PE + +G++ +P+L + AAG KRL GV CQ+ ALR ++
Sbjct: 120 DKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQ 179
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L LEKLYV+GT C DN T E FL S +PET+ + EF DY V L+ DG+++
Sbjct: 180 DQLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKA 239
Query: 294 VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L D +C +C DYTN LAD+ VGYMG + Q++ VRNE
Sbjct: 240 IPFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNE 290
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 412
RG+E+L L+ + + ++ S+G+R V +K + A G P + P ++ + + +
Sbjct: 291 RGEELLKLLGDDVRLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLM 349
Query: 413 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
VGP+G+EFAR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 350 PKVGPRGIEFARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 403
>gi|91978240|ref|YP_570899.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rhodopseudomonas palustris BisB5]
gi|91684696|gb|ABE40998.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris BisB5]
Length = 410
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 214/410 (52%), Gaps = 25/410 (6%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R D+
Sbjct: 14 PPLNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMELQVHGRNRDPSRPDEF 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G +L A +P +GAQWTGI T I +L+TG V+AV+ + DP
Sbjct: 71 FFGPFRRMLQAAMKEPRDGAQWTGITTRIGERLLETGAVDAVLTMAQ----------DPA 120
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D+ P PVL PE + +G++ +P+L L AAG KR+ G+ CQV ALRS+E
Sbjct: 121 DKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLE 180
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L E+LYV+GT C DN T E FL S +PET+ + EF DY V L+ DG ++E
Sbjct: 181 QKLGFERLYVIGTPCSDNTTTENFHGFLDLLSDKPETITYLEFRADYHVELRFTDGRVQE 240
Query: 294 VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L D +C +C DYTN LAD+ VGYM + Q++ VRNE
Sbjct: 241 IPFLLLPISKLKPDFFPITCRTCVDYTNTLADITVGYMA---------GRGEQWLLVRNE 291
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 412
RG+E+L+L+ + + ++ S+G+R V +K + A G P + P ++ + + +
Sbjct: 292 RGEELLNLLGDEVRLSEPTSAGNRTAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLM 350
Query: 413 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
VGP+GLEF R ++ + LH+ R + K++ +P++ +V+ Y
Sbjct: 351 PKVGPRGLEFGRARVEMKAVETVLHLRRNY-KQKIKNMVPAHVWALVKPY 399
>gi|316935327|ref|YP_004110309.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603041|gb|ADU45576.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris DX-1]
Length = 407
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 219/415 (52%), Gaps = 27/415 (6%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR S D+
Sbjct: 13 PPLNQPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPT---MERRVHGRD--SGSGDEA 67
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G + +L A +P EGAQWTGI TTIA +L+TG V+AV+ + DP
Sbjct: 68 FFGPYRRMLQAAMKQPREGAQWTGITTTIAQRLLETGAVDAVIAMAP----------DPS 117
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D+ P PVL PE + +G++ +P+L L AAG KRL GV CQ+ ALR ++
Sbjct: 118 DKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALLEPAIAAGYKRLAVIGVPCQIYALRRLQ 177
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L LEKLYV+GT C DN T E FL S +PET+ + EF DY V ++ DG ++
Sbjct: 178 DQLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFCADYHVEMRFDDGKVKR 237
Query: 294 VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
VP+ LP + L D +C +C DYTN LAD+ VGYMG + Q++ VRNE
Sbjct: 238 VPFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNE 288
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 412
RG+E+L L+ + ++++ S+G+R V +K + A G P + P ++ L+ + +
Sbjct: 289 RGEELLRLLGDEVKLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPLMGWLM 347
Query: 413 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
VGP+G+EFAR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 348 PKVGPRGIEFARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 401
>gi|115523321|ref|YP_780232.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Rhodopseudomonas palustris BisA53]
gi|115517268|gb|ABJ05252.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris BisA53]
Length = 409
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 213/411 (51%), Gaps = 25/411 (6%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP +D C+ CG+ + AC F+ + +E VHGR R D+
Sbjct: 14 PPLAEAAPRDLCTDCGVSRSSDPKQCGQACQFIKPDYT---AMELQVHGRNRDSARPDEE 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G +L A +P EGAQWTGI + + +L+TG VEAV+ + DP
Sbjct: 71 FFGPFRRMLRAAMKQPREGAQWTGITSRLGERLLETGAVEAVLTMAQ----------DPA 120
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D+ P PV+ P+ + +G++ +P L+ L A G KR+ G+ CQ+ ALR +E
Sbjct: 121 DKWKPMPVIVTDPKAMAQCRGMRMGYAPLLSLLEPARARGFKRIAVIGIPCQIYALRQLE 180
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L EK+YV+GT C DN T E FL S +P+T+ + EF DY V L+ DG ++E
Sbjct: 181 KSLGFEKIYVVGTPCSDNTTTENFHGFLDLLSDQPDTITYLEFRADYHVELRFDDGRVKE 240
Query: 294 VPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L P +C +C DYTN LAD+ VGYMG Q Q++ VRNE
Sbjct: 241 IPFLLLPISKLPSTFFPITCRTCVDYTNTLADITVGYMG---------GQGEQWLLVRNE 291
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 412
RG+E+L L+ + ++++ S+G R V +K + A G P + P ++ + + +
Sbjct: 292 RGEEILKLLGDEVKLSEPGSAGKRAAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLM 350
Query: 413 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
VGP+GLEFAR L+ + LH+ R + +R +P + +V+ Y
Sbjct: 351 PKVGPRGLEFARARLEMKAVETVLHLRRNY-PQRMKNMIPDHVWALVKPYG 400
>gi|192290086|ref|YP_001990691.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192283835|gb|ACF00216.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris TIE-1]
Length = 409
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 218/415 (52%), Gaps = 25/415 (6%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R + D+
Sbjct: 13 PPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMERRVHGRNRDAATGDEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G + ++ A +P E AQWTGI TTIA +L+TG V+AV+ + DP
Sbjct: 70 FFGPYRRMVQAAMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAP----------DPS 119
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D+ P PVL PE + +G++ +P+L + AAG KRL GV CQ+ ALR ++
Sbjct: 120 DKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQ 179
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L LEKLYV+GT C DN T E FL S +PET+ + EF DY V L+ DG+++
Sbjct: 180 DQLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKA 239
Query: 294 VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L D +C +C DYTN LAD+ VGYMG + Q++ VRNE
Sbjct: 240 IPFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNE 290
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 412
RG+E+L L+ + + ++ S+G+R V +K + A G P + P ++ + + +
Sbjct: 291 RGEELLKLLGDDVRLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLM 349
Query: 413 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 467
VGP+G+EFAR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 350 PKVGPRGIEFARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 403
>gi|209963491|ref|YP_002296406.1| coenzyme F420 hydrogenase [Rhodospirillum centenum SW]
gi|209956957|gb|ACI97593.1| coenzyme F420 hydrogenase [Rhodospirillum centenum SW]
Length = 423
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 209/405 (51%), Gaps = 27/405 (6%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ T AC F+ + G+ET VHGR R + + G ++ A
Sbjct: 25 CTDCGISRTTTPGRCGHACQFIRPDYA---GMETQVHGRSRDPSRPGELHFGPFRRMVRA 81
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
P GAQWTGI T IA +L+TG V+AV+ + DPDD+ P PVL
Sbjct: 82 AMATPRPGAQWTGITTRIAERLLETGAVDAVLTMAP----------DPDDKWRPVPVLVT 131
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
PE + +G++ +P L L G +RL G+ CQV ALR +E L E+LYV+
Sbjct: 132 KPEGMARCRGMRMGYAPLLALLEPARERGYRRLAVVGIPCQVHALRRLEAELGFERLYVI 191
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
G C DN T E +FL S PET+ + EF D+ V L+ DG ++E+P+ LP + L
Sbjct: 192 GIPCSDNTTTERFHQFLNLLSDRPETITYLEFRADFYVELRFDDGRVKEIPFLLLPISKL 251
Query: 305 -VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 363
D +C +C DYTN LAD+ VGYMG Q Q++ VRNERG+E+LSL+ +
Sbjct: 252 PTDFFPLTCRTCVDYTNVLADITVGYMG---------GQGEQWLLVRNERGEELLSLLGD 302
Query: 364 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 423
+ ++ S+G R+ V ++ A G P + P ++ L+ + + VGPKGLEFA
Sbjct: 303 EVRLSEPGSAGKRQGPVKGFIENTKRAAGGL-PLRQMPDWLRPLVGWLMPKVGPKGLEFA 361
Query: 424 RYSLDYHTIRNYLHVNRAWGKKRADKHM-PSYAKKIVEMYNQNGQ 467
R ++ LH+ R + R KHM P + ++V Y +
Sbjct: 362 RARVEMKASETVLHLRRE--QPRRMKHMVPPHVWELVRPYGLEAE 404
>gi|90422756|ref|YP_531126.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rhodopseudomonas palustris BisB18]
gi|90104770|gb|ABD86807.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris BisB18]
Length = 409
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 221/420 (52%), Gaps = 32/420 (7%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP A++ C+ CG+ T AC F+ +E VHGR R D+
Sbjct: 14 PPLAEPVARELCTDCGVSRTSDPKQCGQACQFIKPDYP---AMELRVHGRVRDPAKPDEA 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G ++ A +P +GAQWTGI T I +L+TG V+AV+ + DPD
Sbjct: 71 FFGPFRRMVRAAMKQPRQGAQWTGITTMIGERLLQTGAVDAVLTM----------AQDPD 120
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D+ P PV+ E + A +G++ +P L+ L AG KR+ G+ CQ+ ALR +E
Sbjct: 121 DKWKPMPVIVTKAEGMKACRGMRMGYAPLLSLLEPARDAGHKRIAVIGIPCQIYALRQLE 180
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L EKLY +GT C DN T E +FL S +P+++ + EF DY V L+ DG ++E
Sbjct: 181 QKLGFEKLYAIGTPCSDNTTTESFHQFLDLLSDKPDSITYLEFRADYHVELRFDDGRVKE 240
Query: 294 VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L D +C +C DYTN LAD+ VGYMG Q Q++ +RNE
Sbjct: 241 IPFLLLPISKLPPDFFPMTCRTCVDYTNTLADITVGYMG---------GQGEQWLLIRNE 291
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAF 410
RG+E+L ++ + + ++ S+G R V +K N ++ G P + P ++ L+ +
Sbjct: 292 RGEELLRVLGDEVRLSEPGSAGKRTAPVKGFMK---NVELAAGGLPVRGMPNWLRPLMGW 348
Query: 411 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 467
+ VGP+GLEFAR ++ I + LH+ R + +R +P++ +V+ Y Q+G+
Sbjct: 349 LMPKVGPRGLEFARTRVEMKAIESVLHLRRQY-PQRIKNMVPAHVWALVKPYGIEPQDGE 407
>gi|383757271|ref|YP_005436256.1| hypothetical protein RGE_14160 [Rubrivivax gelatinosus IL144]
gi|381377940|dbj|BAL94757.1| hypothetical protein RGE_14160 [Rubrivivax gelatinosus IL144]
Length = 413
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 213/409 (52%), Gaps = 33/409 (8%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PA+ C+ CG+ + AC F+ + +ET V GR R D+ + G
Sbjct: 20 PARTLCTDCGVSRSSDPRRCGRACQFIQPDYA---AMETRVQGRPRDPGRADELHFGPFR 76
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
+ A +P +GAQWTGI T +A +L+TG V+AV+ + DP+DR P
Sbjct: 77 RMWRAALKRPSDGAQWTGITTRLAERLLETGAVDAVLTMAP----------DPEDRWRPV 126
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P L P E+ +G++ +P L+ L AAG KRL G+ CQV ALR++E L LE
Sbjct: 127 PTLVTKPGELARCRGMRMGYAPLLSLLEPAVAAGHKRLAVIGIPCQVYALRALEQELGLE 186
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
+LYV+GT C DN T E +FL + +PE++ + EF DY V ++ DG VP+ L
Sbjct: 187 QLYVIGTPCSDNTTTENFHRFLGLLTPKPESITYLEFRADYHVEIRFDDGRQRRVPFLQL 246
Query: 300 PANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
P + L D +C +C DY+N LAD+ VGYMG + Q++ VRNERG+++L
Sbjct: 247 PLSQLPTDFFPLTCRTCVDYSNVLADITVGYMG---------GEGEQWLLVRNERGEKIL 297
Query: 359 SLVKNLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 414
L+ + + + S+G R + F+ T +A + R PS ++ ++ + +
Sbjct: 298 GLLGDEVTLAEPGSAGKREGPVKGFLANTERAAGGLPLRRMPS-----WLRPIVGWLMPK 352
Query: 415 VGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
VGP+GLEFAR L+ + LH+ R K + +P + K+VE Y
Sbjct: 353 VGPRGLEFARARLEMKAVETVLHLRREQPAKMKN-MVPPHVWKLVEPYG 400
>gi|332527610|ref|ZP_08403657.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rubrivivax benzoatilyticus JA2]
gi|332112013|gb|EGJ11990.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rubrivivax benzoatilyticus JA2]
Length = 404
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 212/410 (51%), Gaps = 25/410 (6%)
Query: 55 PGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTY 114
P P + C+ CG+ + AC F+ + +ET VHGR R D+ Y
Sbjct: 6 PHDAAPTRTLCTDCGVSRSADPRRCGRACQFIQPDYA---AMETRVHGRPRDPARADERY 62
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
G + A +P EGAQWTGI T +A +L+TG V+AV+ + DP+D
Sbjct: 63 FGPFRRMWRAALKRPSEGAQWTGITTRLAERLLETGAVDAVLTMAP----------DPED 112
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 234
R P P L P ++ +G++ +P L+ L AAG KRL G+ CQV ALR++E
Sbjct: 113 RWRPVPTLVTKPGDLARCRGMRMGYAPLLSLLEPAVAAGHKRLAVIGIPCQVYALRALEQ 172
Query: 235 HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 294
L LE+LYV+GT C DN T E +FL + +PE++ + EF DY V ++ DG V
Sbjct: 173 ELGLEQLYVIGTPCSDNTTTENFHRFLGLLTPKPESITYLEFRADYHVEIRFDDGRQRRV 232
Query: 295 PYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 353
P+ LP + L D +C +C DY+N LAD+ VGYMG + Q++ VRNER
Sbjct: 233 PFLQLPLSQLPTDFFPLTCRTCVDYSNVLADITVGYMG---------GEGEQWLLVRNER 283
Query: 354 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 413
G+++L L+ + + + S+G R V + + A G P + P ++ ++ + +
Sbjct: 284 GEKILGLLGDEVTLAEPGSAGKREGPVKGFLANTERAAGGL-PLRRMPAWLRPIVGWLMP 342
Query: 414 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
VGP+GLEFAR L+ + LH+ R K + +P + ++V+ Y
Sbjct: 343 KVGPRGLEFARARLEMKAVETVLHLRREQPAKMKN-MVPPHVWELVQPYG 391
>gi|402851269|ref|ZP_10899434.1| hydrogenase [Rhodovulum sp. PH10]
gi|402498471|gb|EJW10218.1| hydrogenase [Rhodovulum sp. PH10]
Length = 413
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 198/378 (52%), Gaps = 24/378 (6%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CG+ T AC FL +E VHGR R D+ + G +++
Sbjct: 27 RDLCTDCGVSRTARPGDCGHACQFLKPDYP---AMERRVHGRARDPARPDERFFGPFQQM 83
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
+ A P GAQWTGI T + +L+TGMV+AV+ + DP D P+PV
Sbjct: 84 VRAALKAPRPGAQWTGITTRLGERLLETGMVDAVLTMAP----------DPSDVWRPKPV 133
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 241
L PE + +G++ +P L L A G +++ G+ CQ+ ALR++E L EK+
Sbjct: 134 LVTKPEAMAQCRGMRMGWAPLLALLEPARAQGFEKIAVIGIPCQIHALRALEDDLGFEKI 193
Query: 242 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 301
YV+GT C DN T E +FL + +P T+ + EF DY V L+ DG + VP+ LP
Sbjct: 194 YVVGTPCSDNTTTERFHEFLALLADDPSTITYLEFRADYCVELRFSDGSEKRVPFLMLPL 253
Query: 302 NDLV-DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 360
+ L D +C +C DYTN LAD+ VGYMG + Q++ VRN+RG E+LSL
Sbjct: 254 SKLPRDFFPLTCRTCVDYTNTLADITVGYMG---------GEGEQWLLVRNDRGAEILSL 304
Query: 361 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 420
+ + + P S+G R V +K + A G P + P F+ L+A+ + +GP+GL
Sbjct: 305 LGDEVRTAPPGSAGKRAAPVKGFLKNTERAAGGL-PVRGTPNFLRPLVAWLMPKIGPRGL 363
Query: 421 EFARYSLDYHTIRNYLHV 438
EFAR ++ I LH+
Sbjct: 364 EFARARVEMKAIETILHL 381
>gi|159045808|ref|YP_001534602.1| putative coenzyme F420 hydrogenase [Dinoroseobacter shibae DFL 12]
gi|157913568|gb|ABV95001.1| putative coenzyme F420 hydrogenase [Dinoroseobacter shibae DFL 12]
Length = 409
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 212/414 (51%), Gaps = 31/414 (7%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P G + C+ CGL T A AC F+ + +E VHGR R D+
Sbjct: 12 PTPGPAAQRKLCTDCGLSRTKDAAKCGQACQFIQPDYPK---MEAQVHGRARDPGRGDEQ 68
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G + + A P GAQWTG+ T +A ++L+ G V+AV+ + DP+
Sbjct: 69 FFGPYRRMYRAALHAPKPGAQWTGLTTRLAQKLLEDGAVDAVLGM----------GPDPE 118
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D PRPV+ P E+ +G++ +P L+ L G++RL G+ CQV ALR++E
Sbjct: 119 DSWRPRPVIITDPAEMAHLRGMRMGYAPLLSLLEPAAKTGLRRLAIIGIPCQVYALRAME 178
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L E+LYV+GT C DN T E +FL S PE + + EF DY V L+ +DG +
Sbjct: 179 AELGFERLYVIGTPCSDNTTTENFHQFLARLSPRPEDITYLEFRADYHVELRFIDGSRRD 238
Query: 294 VPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP +DL + P +C +C DYTN LAD+ VGYM + Q++ VRN
Sbjct: 239 IPFLKLPLSDLPNDFFPMTCRTCVDYTNTLADITVGYMA---------GEGDQWLIVRNA 289
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVK--ADDNAKMGRG-PSQPAPKFVGNLIA 409
RG+E+L + + + + S+G R +VK A++ A+ G P + P + ++
Sbjct: 290 RGQEILDRLGDEVRLETPGSAGKR----AGSVKGFAENTARAAGGLPLRKMPDWARGIVG 345
Query: 410 FFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+ + +GPKGLEFAR ++ + LH+ RA KR +P + ++ E Y
Sbjct: 346 WLMPRIGPKGLEFARARVEMKAVETVLHLRRA-HPKRMRAMIPDHVWRLAEPYG 398
>gi|312114853|ref|YP_004012449.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219982|gb|ADP71350.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodomicrobium vannielii ATCC 17100]
Length = 417
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 214/415 (51%), Gaps = 25/415 (6%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CG+ + AC F+ + +E VHGR R D+ + G ++ +
Sbjct: 20 RDLCTDCGVSRSSDPRRCGRACQFIKPDYPK---MEARVHGRTRNPQREDERFFGPYKRM 76
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
A +P EGAQWTGI T I +L+TG V+AV+ + + D DR P+P
Sbjct: 77 ARAAMKRPREGAQWTGITTRIGERLLETGAVDAVLTMVA----------DDADRWRPKPA 126
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 241
L ++ A+G++ +P L L AG KR+ GV CQ+ ALR +E L E++
Sbjct: 127 LITRAADMAKARGMRMGYAPLLALLEPAREAGHKRIAVIGVPCQIFALRGIEQELGFERV 186
Query: 242 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 301
Y +GT C DN T E KFL S +PET+ + EF DY V L+ +G ++E+P+ LP
Sbjct: 187 YAIGTPCSDNTTTENFHKFLNLLSDKPETITYLEFRADYHVELRFENGKVKEIPFLLLPI 246
Query: 302 NDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 360
+ L D +C +C DYTN+L+D+ VGYM Q Q++ VRNE G+E+L L
Sbjct: 247 SKLPADFFPLTCRTCVDYTNSLSDITVGYMA---------GQGQQWLIVRNETGEELLRL 297
Query: 361 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 420
+ + + ++ ++G R V +K + A G P + P + + + + VGP+GL
Sbjct: 298 LGDEVSLSEPGTAGKRDGPVKGFLKNTELAAGGL-PMRSMPNWARPIAGWLMPKVGPRGL 356
Query: 421 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 475
EFAR ++ + LH+ RA KR +P + +VE Y + + +SSK
Sbjct: 357 EFARARVEMKAVETVLHL-RAKLPKRIHNMVPEHVWALVERYGLVPSLSERVSSK 410
>gi|119356035|ref|YP_910679.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chlorobium
phaeobacteroides DSM 266]
gi|119353384|gb|ABL64255.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium phaeobacteroides DSM 266]
Length = 428
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 206/389 (52%), Gaps = 47/389 (12%)
Query: 65 CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS+CGLC + + + ++C F +E E + GR R D D+ G+ +
Sbjct: 31 CSKCGLCMGNAWPVKESLESCVF---RCGWVENHEKRIFGRVRNPDDSDELRFGISLKRF 87
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
A KPV GAQW+GI+T I+ L+T +V+AV+ + + L P+ VL
Sbjct: 88 NATLKKPVNGAQWSGIITRISTMALQTNLVDAVLTLHG-------------EPLQPKAVL 134
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----HHLNL 238
A+T +++ A+G KP LSP L L +RLL G C V +R + +L
Sbjct: 135 AKTAQDIHEARGNKPVLSPVLQALHTAYREKTRRLLVVGAACHVHMVRDFTRKSPYFADL 194
Query: 239 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 298
+ LY++G C DN L + S PETV+++EFMQDY+VH+ H G +E++P+FC
Sbjct: 195 D-LYIVGIPCTDNLEPSHLQWVFRNISKNPETVINFEFMQDYRVHILHKAGKVEKIPFFC 253
Query: 299 LPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 357
LP+ + V V SC SCFDY N+L+D+ VGY+G P S + Q+I VR ERG+++
Sbjct: 254 LPSAVMKVGVFPNSCLSCFDYINSLSDITVGYLGAP----YSKNRKTQWIIVRTERGEKL 309
Query: 358 LSLVKNLLEITPTISSGDR--------RPFVMETV---KADDNAKMGRGPSQPAPKFVGN 406
L L+ + +E +P + GD +P +M + K DD M PK++G
Sbjct: 310 LDLINDEIETSPEVFFGDSHSAVQAALQPTLMPILQPEKLDDRKAM--------PKWLGI 361
Query: 407 LIAFFINLVGPKGLEFARYSLDYHTIRNY 435
++ GP G EFA+YS+D H IRN+
Sbjct: 362 YLSRKKAKSGPGGTEFAKYSIDIHAIRNF 390
>gi|254282622|ref|ZP_04957590.1| putative coenzyme F420 hydrogenase beta subunit [gamma
proteobacterium NOR51-B]
gi|219678825|gb|EED35174.1| putative coenzyme F420 hydrogenase beta subunit [gamma
proteobacterium NOR51-B]
Length = 412
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 210/405 (51%), Gaps = 25/405 (6%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P ++ C+ CG+ T AC F+ + LE VHGR R + D+ + GV
Sbjct: 6 PHRNLCTDCGISRTEDPDRCGRACQFIRPDYA---ALEQRVHGRTRDLERGDERFFGVTR 62
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
+L AR+ P E AQWTGI T I ++L+T V V+C+ DP+D P+
Sbjct: 63 AMLRARRNPPAENAQWTGITTLIGQKLLETEAVSGVLCI----------GPDPEDSWKPQ 112
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P L P+ + +G++ +P L L AAG +RL G+ CQ+ ALR++E L LE
Sbjct: 113 PRLITEPDAMAGCRGMRMGYAPLLALLEPAIAAGHRRLAVIGIPCQIYALRALEEELGLE 172
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
+LYV+GT C DN T E FL+ +PE + + EF+ D+ V L+ DG +P+ L
Sbjct: 173 RLYVIGTPCSDNTTTENFHHFLEKLDDKPEDITYLEFLPDFHVELRFTDGRKRRIPFLML 232
Query: 300 PANDLV-DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
P DL D +C +C DYTNALAD+ VGYMG Q++ RN RG E+L
Sbjct: 233 PIADLPKDFFPLTCRTCVDYTNALADITVGYMG---------GSGEQWLITRNPRGVELL 283
Query: 359 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 418
SL+++ L + P SSG+RR V ++ A G P + P ++ ++A + + GPK
Sbjct: 284 SLIEDELVLAPPTSSGNRRSAVAGFIENTRRA-CGGLPLRRMPGWLRPIVARLMPITGPK 342
Query: 419 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
GLEFAR L+ + LH+ R KR +P Y + Y+
Sbjct: 343 GLEFARTRLEMKAAESVLHLRRE-APKRMRHMLPDYIWTLTAPYD 386
>gi|384262343|ref|YP_005417530.1| coenzyme F420 hydrogenase [Rhodospirillum photometricum DSM 122]
gi|378403444|emb|CCG08560.1| Coenzyme F420 hydrogenase [Rhodospirillum photometricum DSM 122]
Length = 397
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 211/414 (50%), Gaps = 25/414 (6%)
Query: 58 TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGV 117
T PA+ C+ CG+ + AC F+ +R LE +HGR R + D+ + G
Sbjct: 6 TAPARALCTDCGVSRSSDPRRCGRACQFIHPDYAR---LEARIHGRARDPERADELFFGP 62
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
+ ++ A +P EGAQWTGI T +A +L++G VEAV+ + + DP DR
Sbjct: 63 YTAMVQAALKEPREGAQWTGITTRLAERLLESGQVEAVLAMAA----------DPADRWR 112
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 237
P P L P ++ +G++ +P L L A G++RL GV CQ+ LR +E L
Sbjct: 113 PVPTLVTDPADMKRCRGMRMGYAPLLAELEPARARGIRRLAVIGVPCQIYPLRELEESLG 172
Query: 238 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 297
+++ V+G C DN T E +FL + PETV + EF+ +Y V ++ DG + +P+
Sbjct: 173 FDEITVIGIPCSDNTTTENFHRFLGVLTPAPETVTYLEFLANYHVEMRFTDGRVRHIPFL 232
Query: 298 CLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 356
LP + L D +C +C DYTNALADL VGYMG + Q++ VRN RG+
Sbjct: 233 KLPLSTLPADFFPLTCRACVDYTNALADLTVGYMG---------GRGEQWVLVRNARGQA 283
Query: 357 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 416
+L L+ + + ++ S+G R V + + A G P + P + ++A+ + G
Sbjct: 284 VLDLLGDEVRLSAPTSAGKRFSAVKGFLANVERAAGGL-PLRSMPDWARPIVAWLMPRTG 342
Query: 417 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 470
P+GLEFAR ++ + +H+ + + KR +P + +V Y D+
Sbjct: 343 PRGLEFARTRVEMKALEAIVHLRQHY-PKRLKAMIPPHLWTLVAPYGLTPGPDE 395
>gi|110681118|ref|YP_684125.1| coenzyme F420 hydrogenase, beta subunit [Roseobacter denitrificans
OCh 114]
gi|109457234|gb|ABG33439.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter
denitrificans OCh 114]
Length = 402
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 212/413 (51%), Gaps = 44/413 (10%)
Query: 69 GLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
GLC ++ +KD AC F+ LE VHGR R + D+T+ G + +
Sbjct: 13 GLCTDCGVSRLKDPRACGKACQFIAPDYP---ALEKAVHGRAR--GTGDETFFGPFKAMH 67
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
AR P EGAQWTGI T +A ++L G V+AV+ + D DR P+P L
Sbjct: 68 RARMVAPAEGAQWTGITTALAADLLTRGRVDAVLTMVP----------DDADRWRPKPAL 117
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY 242
++ A+G++ +P L L +A G RL G+ CQ+ ALR++E L LE+LY
Sbjct: 118 ITEASDMARARGMRMGYAPLLALLEEAQAQGFNRLAVIGIPCQIYALRALEADLGLERLY 177
Query: 243 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 302
V+GT C DN T E +FL PET+ + EF DY+V L+ DG +P+ LP +
Sbjct: 178 VIGTPCSDNTTTENFHRFLALLDEAPETITYLEFRADYQVELRFTDGRQRLIPFLSLPIS 237
Query: 303 DL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
DL D +C +C DYTN+LAD+ VGYMG + Q++ VRN RG EML+ +
Sbjct: 238 DLPRDFFPLTCRTCVDYTNSLADITVGYMG---------GEGGQWLLVRNARGAEMLAGL 288
Query: 362 KNLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 417
+ +++ S+G R + F+ T +A G P + P ++ ++++ +GP
Sbjct: 289 GDRIQLQTPGSAGKRANAVKGFIANTARA-----AGGLPLRRMPDWLRPIVSWLQPRIGP 343
Query: 418 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 467
+GLEFAR ++ LH+ R K + +P + K+ Y+ Q+G+
Sbjct: 344 RGLEFARTRIEMKAAETILHLRREEPAKMKN-MIPDHVWKVAAPYDLTPQDGE 395
>gi|37522112|ref|NP_925489.1| hypothetical protein glr2543 [Gloeobacter violaceus PCC 7421]
gi|35213111|dbj|BAC90484.1| glr2543 [Gloeobacter violaceus PCC 7421]
Length = 388
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 215/414 (51%), Gaps = 38/414 (9%)
Query: 54 PPGGTYPAKDH--CSRCGLC-DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSL 110
P G YP + CS CGLC + AHV++ C F D R+ E +HGR RR S
Sbjct: 5 PIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDD---RVSEREVQLHGRSRRL-SG 60
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNS 170
D+ Y GV + AR + P +Q G V+T+ +L +G VEAV+ +
Sbjct: 61 DELYFGVFRSMHAARLSTPRPDSQTGGAVSTLLERLLDSGKVEAVLTTRR---------- 110
Query: 171 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
+PD+ + PVL R E+ G + L+P L+ + V+ G++RL GVGCQV ALR
Sbjct: 111 NPDN--TGTPVLVRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGVGCQVSALR 168
Query: 231 SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 290
++E L LEKLYV+G C DN T + +K S P TV EFM D+++ H +G
Sbjct: 169 AIEAQLGLEKLYVVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGA 228
Query: 291 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 350
IE+V YF +P + L +C SCFD TN LADL VGYM I Q+ VR
Sbjct: 229 IEKVSYFEMPMDKLRGCFPQACLSCFDQTNGLADLSVGYMA----ADIGW----QWFLVR 280
Query: 351 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 410
NE+G+ + +L+++ LE+ G+R + + ++ +G+ P+ P + L +
Sbjct: 281 NEQGEALFNLLRDDLEMGRFTDRGNRSEAMKQILRY-----LGK-PAITLPSLLAQLFTW 334
Query: 411 FINLVGPKGLEFARYSLDYHTIRN--YLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ GP+GLEFAR +++ RN YL +R + K +P + + I++ Y
Sbjct: 335 QVEHFGPRGLEFARLAVENKQTRNWYYLKTHRP---DKLKKLIPRHVQAILDQY 385
>gi|339502020|ref|YP_004689440.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Roseobacter
litoralis Och 149]
gi|338756013|gb|AEI92477.1| putative coenzyme F420 hydrogenase/dehydrogenase, subunit beta
[Roseobacter litoralis Och 149]
Length = 405
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 209/413 (50%), Gaps = 44/413 (10%)
Query: 69 GLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
GLC ++ KD AC F+ LE VHGR R + D+T+ G + +
Sbjct: 13 GLCTDCGVSRFKDPRACGKACQFIAPDYP---ALEKAVHGRTR--GAGDETFFGPFKAMH 67
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
AR P EGAQWTGI T +A ++L G V+AV+ + D D P+P L
Sbjct: 68 RARMVAPAEGAQWTGITTALAADLLTRGRVDAVLTMVP----------DDADSWRPKPAL 117
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY 242
++ A+G++ +P L L +A G KRL G+ CQ+ ALR++E L LE+LY
Sbjct: 118 ITEASDMARARGMRMGYAPLLALLEEAQAQGFKRLAVIGIPCQIYALRALEADLGLERLY 177
Query: 243 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 302
V+GT C DN T E FLK PET+ + EF D+KV L+ DG +P+ LP +
Sbjct: 178 VIGTPCSDNTTTENFHTFLKLLDEAPETITYLEFRADFKVELRFTDGRQRLIPFLSLPIS 237
Query: 303 DLV-DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
DL D +C +C DYTN+LAD+ VGYMG + Q++ VRN RG EML +
Sbjct: 238 DLPRDFFPLTCRTCVDYTNSLADITVGYMG---------GEGDQWLLVRNARGAEMLEGL 288
Query: 362 KNLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 417
+ + S+G R + F+ T +A G P + P ++ ++++ +GP
Sbjct: 289 GARIHLQAPGSAGKRANAVKGFIANTARA-----AGGLPLRRMPDWLRPIVSWLQPRIGP 343
Query: 418 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 467
+GLEFAR ++ LH+ R K + +P + K+ E Y+ Q+G+
Sbjct: 344 RGLEFARTRVEMKAAETILHLRREEPAKMKN-MVPDHVWKVAEPYDLKPQDGE 395
>gi|89052791|ref|YP_508242.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Jannaschia sp. CCS1]
gi|88862340|gb|ABD53217.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Jannaschia sp. CCS1]
Length = 412
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 199/412 (48%), Gaps = 32/412 (7%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P +R GLC I+ + D AC F+ E +HGR ++
Sbjct: 13 PKLTGAARPGLCTDCGISRMGDGKACGKACQFIAPDYPTAE---NRIHGRSAEPALAEEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ GV + A T P +GAQWTGI T +A E+L++ V AV+ V PD
Sbjct: 70 FFGVTHSMQRAALTVPADGAQWTGITTELAAELLRSEAVTAVLAVAP----------HPD 119
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
DR P PV+ P+E+ +G++ +P L L AAG R+ G+ CQV ALR +E
Sbjct: 120 DRWKPLPVIVTDPDEMAKCRGMRMGYAPTLAALEPAIAAGHTRIAVIGIPCQVYALRQIE 179
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L L++LYV+GT C DN T E FL PET+ + EF DYKV L+ DG
Sbjct: 180 QTLGLDRLYVIGTPCSDNTTTENFHHFLSLLDDAPETISYLEFRADYKVELRFDDGRAPR 239
Query: 294 -VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 351
VP+ LP + L D +C +C DYTN LAD+ VGYMG Q++ RN
Sbjct: 240 VVPFLKLPISKLDPDFFPLTCKTCVDYTNRLADITVGYMG---------GDGDQWVITRN 290
Query: 352 ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFF 411
RG EML+ + + + TP G +R ++ A+ G P + P ++ L++F
Sbjct: 291 ARGAEMLAAISDRITFTPLTDKG-KRGGAVKGFLANTERAAGGMPLRSMPDWLRPLVSFL 349
Query: 412 INLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+GP+GLEFAR ++ I LH+ R R +P + + E Y+
Sbjct: 350 QPRIGPRGLEFARARVEMKAIDTILHLRRT-HPARVKNMVPGHVWSVAEPYD 400
>gi|304393680|ref|ZP_07375608.1| coenzyme F420 hydrogenase [Ahrensia sp. R2A130]
gi|303294687|gb|EFL89059.1| coenzyme F420 hydrogenase [Ahrensia sp. R2A130]
Length = 454
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 210/407 (51%), Gaps = 26/407 (6%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ + AC F+ + E V HGR + D+ + GVH+ ++ A
Sbjct: 65 CTDCGVSRMADPSACGTACQFIAPEYAESE---MVAHGRAA-SERPDEVHFGVHQRIVRA 120
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
R EGAQWTGI T +A E+L+ G V+AV+ + SD DD+ P+P L
Sbjct: 121 RMAHSAEGAQWTGITTGLAAELLEQGKVDAVLAM---------VPSD-DDKWRPKPALIT 170
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
++ A+G++ +P L L AG KRL G+ CQ+ ALR +E L LE+LYV+
Sbjct: 171 DAADMTRARGMRMGYAPLLALLEPALEAGHKRLAVIGIPCQIHALRKLEAELGLERLYVI 230
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
GT C DN T E FL+ PE + + EF DY+V L+ DG E+P+ LP + L
Sbjct: 231 GTPCSDNTTTENFHTFLELLDDRPERITYLEFRADYQVELRFDDGTKREIPFLKLPISKL 290
Query: 305 -VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 363
D +C +C DYTN LAD+ VGYMG TG Q++ VRNERG+E+L+ + +
Sbjct: 291 PSDFFPLTCRTCVDYTNRLADITVGYMG---GTG------EQWLIVRNERGEELLADLDD 341
Query: 364 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 423
+ P S G R V A+ G P + P +V ++AF + +GPKG EFA
Sbjct: 342 KIITGPVASKGKRESHV-RGFMANVERAAGGLPLRAMPDWVRPIVAFMMPKIGPKGQEFA 400
Query: 424 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 470
R ++ I LH+ RA K+ +P++ K+V Y + D+
Sbjct: 401 RTRVEMKAIETVLHL-RAAMPKKMRSMVPAHIWKLVAPYGLVPEKDE 446
>gi|194337716|ref|YP_002019510.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310193|gb|ACF44893.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pelodictyon phaeoclathratiforme BU-1]
Length = 391
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 42/359 (11%)
Query: 93 IEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMV 152
+E E + GR R D D+ G+ + A KPV GAQW+GI+T I+ L+T +V
Sbjct: 21 VENHEKRIFGRVRNPDDSDELRFGISLKRFNATLKKPVNGAQWSGIITRISTMALQTNLV 80
Query: 153 EAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA 212
+AV+ + + L P+ VLA+T +++ A+G KP LSP L L
Sbjct: 81 DAVLTLHG-------------EPLQPKAVLAKTAQDIHEARGNKPVLSPVLQALHTAYRE 127
Query: 213 GVKRLLFCGVGCQVQALRSVE----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEP 268
+RLL G C V +R + +L+ LY++G C DN L + S P
Sbjct: 128 KTRRLLVVGAACHVHMVRDFTRKSPYFADLD-LYIVGIPCTDNLEPSHLQWVFRNISKNP 186
Query: 269 ETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVV 327
ETV+++EFMQDY+VH+ H G +E++P+FCLP+ + V V SC SCFDY N+L+D+ V
Sbjct: 187 ETVINFEFMQDYRVHILHKAGKVEKIPFFCLPSAVMKVGVFPNSCLSCFDYINSLSDITV 246
Query: 328 GYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDR--------RPF 379
GY+G P S + Q+I VR ERG+++L L+ + +E +P + GD +P
Sbjct: 247 GYLGAP----YSKNRKTQWIIVRTERGEKLLDLINDEIETSPEVFFGDSHSAVQAALQPT 302
Query: 380 VMETV---KADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 435
+M + K DD M PK++G ++ GP G EFA+YS+D H IRN+
Sbjct: 303 LMPILQPEKLDDRKAM--------PKWLGIYLSRKKAKSGPGGTEFAKYSIDIHAIRNF 353
>gi|83592273|ref|YP_426025.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Rhodospirillum rubrum ATCC 11170]
gi|386348985|ref|YP_006047233.1| coenzyme F420 hydrogenase [Rhodospirillum rubrum F11]
gi|83575187|gb|ABC21738.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodospirillum rubrum ATCC 11170]
gi|346717421|gb|AEO47436.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodospirillum rubrum F11]
Length = 410
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 211/419 (50%), Gaps = 31/419 (7%)
Query: 52 PIPPGGT------YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR 105
P P G T P++D C+ CGL T AC F+ G E VHGR R
Sbjct: 3 PPPDGATPPSEVALPSRDLCTDCGLSRTATPNRCGRACQFI---RPDYPGQEARVHGRCR 59
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILS 165
D+ + G ++++ A P GAQWTGI T +A +L+T V+AV+ + +
Sbjct: 60 DPARGDELFFGPYQQMYQAALIPPSPGAQWTGITTALAGRLLETRTVDAVLAMAA----- 114
Query: 166 YYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQ 225
DP DR P PV+ ++ +G++ +P L+ + AAG KRL G+ CQ
Sbjct: 115 -----DPADRWKPLPVIITQAADMARCRGMRMGHAPLLSLIEPAIAAGHKRLAVIGLPCQ 169
Query: 226 VQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
V ALR++E L LE+L V+GT C DN T FL + +P++V + EF DY V L+
Sbjct: 170 VHALRAIEADLGLERLLVIGTPCSDNTTTPRFHDFLGLLADDPDSVTYLEFRADYHVELR 229
Query: 286 HLDGHIEEVPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
+G + +P+ LP + L D +C +C DYTN LAD+ VGYM +
Sbjct: 230 FREGGRKLIPFLKLPLSKLPADFFPLTCKTCVDYTNVLADITVGYMA---------GRGE 280
Query: 345 QYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFV 404
Q++ VRN+RG +ML L+ + + +T S+G RR V +K A G P + P +
Sbjct: 281 QWLLVRNDRGADMLGLLGDRIRLTEPTSAGKRRGPVAGFLKNVARAAGGM-PVRAMPDWA 339
Query: 405 GNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
L A+ + +GP+GLEFAR ++ I LH+ + +R +P++ +V Y
Sbjct: 340 RPLAAWLMPKIGPRGLEFARARVEMKAIETVLHLRKD-RPRRLRTMVPAHVWALVAPYG 397
>gi|194333446|ref|YP_002015306.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311264|gb|ACF45659.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Prosthecochloris aestuarii DSM 271]
Length = 381
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 205/371 (55%), Gaps = 27/371 (7%)
Query: 104 GRRKDSLD--DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSL 161
GR++D D + G+ E A P+ GAQW GI+T +A++ + +EAVV +
Sbjct: 24 GRQRDLHDPVEMRFGITLERFSATLQHPLPGAQWGGIITRMALKAFENNTIEAVVTL--- 80
Query: 162 VILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 221
+ +++ +PVLA T +E+ ++G KP LSP L +L G+K+LL G
Sbjct: 81 -------HRTRENQFFSQPVLAETAQEIYDSRGNKPVLSPVLRSLETAYRKGIKKLLVIG 133
Query: 222 VGCQVQALRSVEH---HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ 278
C + LR + +L +++ +G CVDN R+ LK S P + +H EFMQ
Sbjct: 134 AACHLHVLRDFQERFTYLQDMEIFTIGIPCVDNIDRQRWPWVLKRMSRSPLSAMHMEFMQ 193
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVD--VIAPSCYSCFDYTNALADLVVGYMGVPKYT 336
D+++H++H +G +E+VP+F LP +L D + +C SCFDY N+LAD+ VGY+
Sbjct: 194 DFRIHIRHTNGMVEKVPFFSLP-QELSDPSIFPVACMSCFDYLNSLADVTVGYLAAE--- 249
Query: 337 GISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGR-- 394
+ + Q++ VR ++GK ++ ++N L P D + FVM T +A + +
Sbjct: 250 -LRPDEKRQWVLVRTQKGKTLIDAIRNELTCYPEEGKWDCKKFVMNTAEATIASMKVQSR 308
Query: 395 --GPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMP 452
P + P ++G++++ ++L GPKG+ FA YS D+H IR+Y +V + ++ ++ +P
Sbjct: 309 TYSPDRKIPLWLGHILSGVLSLAGPKGIGFAHYSTDFHLIRHYYYVRERFPEQ-LERLVP 367
Query: 453 SYAKKIVEMYN 463
+ + I+E Y+
Sbjct: 368 RHVRSILEEYD 378
>gi|302383043|ref|YP_003818866.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Brevundimonas subvibrioides
ATCC 15264]
gi|302193671|gb|ADL01243.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Brevundimonas subvibrioides ATCC 15264]
Length = 415
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 202/401 (50%), Gaps = 26/401 (6%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSL-DDTYLGVHEELLY 123
C+ CG+ AC F+ +ET VHGR R S D+ + G + ++
Sbjct: 25 CTDCGVSRMEDPTLCGKACQFIKPDYP---AMETRVHGRPRDPASRPDELFFGPVKRMVR 81
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLA 183
A P GAQWTGI T I +L+TG V+AV+ + DPDD+ P PVL
Sbjct: 82 ASLKTPAPGAQWTGITTRIGERLLETGAVDAVLTMAP----------DPDDKWRPMPVLV 131
Query: 184 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 243
+ +G++ +P L L A G +RL G+ CQV ALRS+E L L+ LYV
Sbjct: 132 TQASAMAEVRGMRMGYAPLLALLEAARAQGYRRLAVIGIPCQVYALRSLEADLGLDALYV 191
Query: 244 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 303
+GT C DN T E +FL S P+T+ + EF DY V L+ DG ++ +P+ LP +
Sbjct: 192 VGTPCSDNTTTERFHEFLALLSEHPDTITYLEFRADYHVELRFTDGRVKTIPFLSLPISQ 251
Query: 304 LV-DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 362
L D +C +C DYTNALAD+ VGYM Q Q++ VRN+RG+E+L L+
Sbjct: 252 LAPDFFPLTCRTCVDYTNALADITVGYMA---------GQGEQWLLVRNDRGEELLDLLG 302
Query: 363 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 422
+ + ++ G R+ V + + A G P + P +V ++++ GP+GLEF
Sbjct: 303 DEVVLSEPGDKGRRKVAVAGFITNVERAAGGL-PLRRMPDWVRPIVSWLQPRTGPRGLEF 361
Query: 423 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
AR L+ +H+ R +R +P + K+VE Y
Sbjct: 362 ARTRLEMKAAETVIHLRRE-EPRRMKSMIPDHVWKLVEPYG 401
>gi|110597779|ref|ZP_01386063.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Chlorobium ferrooxidans DSM 13031]
gi|110340686|gb|EAT59166.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Chlorobium ferrooxidans DSM 13031]
Length = 399
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 205/409 (50%), Gaps = 30/409 (7%)
Query: 65 CSRCGLCDTYYIAHVK--DACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS CGLC + +C F + ET + GR R +++ G+
Sbjct: 6 CSSCGLCSIKKWPSTESLQSCVFNTGWLGE---HETALFGRERDPLDPEESRFGITSSRF 62
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
AR V AQW+GI+T +A + L + +VE VV + + +D P PVL
Sbjct: 63 VARLRTAVPDAQWSGIITRLAEKALNSKLVEGVVTL----------HRHEEDFFHPIPVL 112
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHL----NL 238
A + +++L AKG P LSP L +L + G+KRLL G C + ALR N+
Sbjct: 113 AGSEKDILKAKGSIPVLSPVLRSLEEAHSKGLKRLLVIGAACHIHALRDFHRRFDYLRNM 172
Query: 239 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 298
E +Y +G CVDN + L+ S P T H EFM DY+VH+KHLDGHIE++P+F
Sbjct: 173 E-IYTIGIPCVDNANEKKWPWILERISKSPATARHIEFMPDYRVHVKHLDGHIEKIPFFS 231
Query: 299 LPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 357
LP I P SC SCFDY N LAD+ VGY+ P + Q++ VR E+G +
Sbjct: 232 LPEELTNPEIFPHSCLSCFDYLNGLADITVGYLAAPFKNRSKL----QWVLVRTEKGSVL 287
Query: 358 LSLVKNLLEITPTISSGDRRPFVMETVKADDNA----KMGRGPSQPAPKFVGNLIAFFIN 413
+L+ + LE P + FV + K+ + K ++ P G+LI+ F+
Sbjct: 288 NNLIADELETFPESGEWECFKFVAASAKSSAESMKCQKKEFRTTRKIPVAAGHLISEFLF 347
Query: 414 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
GP+G+ FA +S+D+H I++Y V + + ++ +P + I+E Y
Sbjct: 348 RTGPRGVGFAHFSVDHHLIKHYYFVKFNY-PQHLERLVPPHVYTILEEY 395
>gi|374618889|ref|ZP_09691423.1| coenzyme F420-reducing hydrogenase, beta subunit [gamma
proteobacterium HIMB55]
gi|374302116|gb|EHQ56300.1| coenzyme F420-reducing hydrogenase, beta subunit [gamma
proteobacterium HIMB55]
Length = 401
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 204/416 (49%), Gaps = 33/416 (7%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P + C+ CG+ T AC F+ +R LE HGR R+ + + + GV E
Sbjct: 13 PHRKLCTDCGISRTSEPGRCGYACQFISPDYAR---LEEQTHGRVRQPEGDVEPFFGVVE 69
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
E+ A GAQWTGI T + +L +G V AV+CV D +D P
Sbjct: 70 EMHQAALAPKRNGAQWTGITTRLGEALLASGDVSAVLCV----------GPDANDPWKPV 119
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 239
P L +++ + +G++ +P L L A G KR+ G+ CQ+ ALRS+E L LE
Sbjct: 120 PRLITDAQDMASCRGMRMGYAPLLELLEPAIADGHKRIAVIGIPCQIYALRSLEKELGLE 179
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 299
L V+GT C DN T E +FL PE + + EFM D+ V L+ G +P+ L
Sbjct: 180 HLVVIGTPCSDNTTTENFHEFLSLLDRNPERINYLEFMPDFHVELRFDTGKKRRIPFLQL 239
Query: 300 PANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
P DL D P +C +C DY N L+D+ VGYMG + Q++ VRN++G++ L
Sbjct: 240 PIADLRDDFFPLTCRTCVDYVNTLSDITVGYMG---------GRGDQWLLVRNQKGEKAL 290
Query: 359 SLVKNLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 414
+ +++ L + +SG R R F+ T +A G P + P+++ ++ + L
Sbjct: 291 NAIRSELTLKAPSTSGKRHAAVRGFIENTRRA-----TGGLPLRRMPQWLRPIVGKIMPL 345
Query: 415 VGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 470
GPKGLEFAR L+ + LH+ R KR +P + K+ E Y D+
Sbjct: 346 TGPKGLEFARTRLEMKAAESILHLRRT-APKRLRTMVPPHVWKLAEPYGLTPSEDE 400
>gi|381166492|ref|ZP_09875706.1| Coenzyme F420 hydrogenase [Phaeospirillum molischianum DSM 120]
gi|380684065|emb|CCG40518.1| Coenzyme F420 hydrogenase [Phaeospirillum molischianum DSM 120]
Length = 411
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 25/411 (6%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP A+ C+ CG+ AC F+ + GLE +HGR R D+
Sbjct: 14 PPYDDAVARPLCTDCGVSRRSDPRACSRACQFIHPDHA---GLEARIHGRVRDPARPDEL 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G ++ A +P GAQWTG+ T +A +L++G V+AV+ + + DP
Sbjct: 71 HFGPFLKMWQAALKEPKPGAQWTGLTTRLAERLLESGKVDAVLTMAA----------DPQ 120
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D P PVL PE + +G++ +P L+ L G +RL GV CQ+ LR +E
Sbjct: 121 DSWRPMPVLVTRPEGMAVCRGMRMGYAPLLSGLEPALERGYRRLAVIGVPCQIHPLRVLE 180
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L E+LYV+G C DN T E FL + P+ V + EF DY V ++ DG +E
Sbjct: 181 PDLGFEQLYVIGIPCSDNTTTEKFHDFLALLTDTPDRVTYLEFRADYHVEMRFADGGKKE 240
Query: 294 VPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L D +C +C DY N+L+DL VGYM + Q++ VRN
Sbjct: 241 IPFLKLPISKLPPDFFPLTCRTCVDYVNSLSDLTVGYMA---------GRGEQWLLVRNR 291
Query: 353 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 412
+G+E+LSL+ + + +T S+G R+ V +K + A G P + P + ++A+ +
Sbjct: 292 KGEEILSLLGDEVRLTEPTSAGKRQGAVSGFIKNTERAAGGL-PMRGMPDWARPIVAWLM 350
Query: 413 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
+GP+GLE AR L+ + +H+ R +R +P++ +VE Y
Sbjct: 351 PKIGPRGLELARARLEMKAAESVIHL-RLQQPRRMAAMIPAHVWTLVEPYG 400
>gi|189346478|ref|YP_001943007.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chlorobium limicola DSM 245]
gi|189340625|gb|ACD90028.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium limicola DSM 245]
Length = 381
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 25/377 (6%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAV 155
LE + GR R D + G+ E AR + + AQW+GI+T +A+ + +V+ V
Sbjct: 18 LERQLFGRERSLDDPVEMRFGITAERFTARMKQRIPDAQWSGIITAMALRAFERKLVDGV 77
Query: 156 VCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVK 215
V + + + + PVLA + +E+ A++G KP LSP L +L G+K
Sbjct: 78 VTL----------HRHTEQQFFSVPVLACSSDEIYASRGNKPVLSPVLRSLQTAYRQGLK 127
Query: 216 RLLFCGVGCQVQALRSVEH---HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVL 272
++L G C + LR +L +++ +G CVDN R L+ S+ P T
Sbjct: 128 KILVIGAACHLHMLRDFRERFPYLQEMEIFTIGIPCVDNIDRSRWTWVLERISASPATAR 187
Query: 273 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD--VIAPSCYSCFDYTNALADLVVGYM 330
H EFMQD+++H++H DG E++PYF LP +L D + +C SCFDY N+L+D+ +GY+
Sbjct: 188 HMEFMQDFRIHIRHSDGSTEKIPYFSLP-QELSDPAIFPKACMSCFDYLNSLSDITIGYL 246
Query: 331 GVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNA 390
++ Q Q++ VR E+G+E+L LV + LE P F+ +T
Sbjct: 247 AAE----LTPQQDRQWVLVRTEKGRELLDLVNHELERFPEWGEWKCEGFIRQTAGGIIEQ 302
Query: 391 KMGRGPSQPA----PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKR 446
G + A P+++G+L++ + +GPKG+ FA YS DYH IR+Y +V R
Sbjct: 303 MKDTGKTYAAEPLIPQWIGHLLSTTMGFIGPKGIGFAHYSADYHMIRHYYYV-RYRLPDH 361
Query: 447 ADKHMPSYAKKIVEMYN 463
++ +P++ I+E Y
Sbjct: 362 LERLVPAHVPVILEEYG 378
>gi|126734589|ref|ZP_01750335.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter sp.
CCS2]
gi|126715144|gb|EBA12009.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter sp.
CCS2]
Length = 404
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 198/395 (50%), Gaps = 30/395 (7%)
Query: 50 SKPIPPGGTYPA-KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+KP P PA + C+ CG+ + AC F+ E +HGR + D
Sbjct: 2 TKPASPQFATPAPRGLCTDCGVSRMADPSACGKACQFI---KPDYPAAEAAIHGRPAQSD 58
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
D+ + GV + + A +GAQWTG+ T A +L+TG V+AV+ +
Sbjct: 59 G-DEQFFGVTQAMYRAALIPARDGAQWTGLTTRFAERLLETGAVDAVLTMVP-------- 109
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
D D+ PRP + ++ A+G++ +P L L AAG +++ G+ CQ+ A
Sbjct: 110 --DDADKWRPRPAIITKAADMKHARGMRMGYAPLLALLEPAHAAGHRKIAVIGIPCQIYA 167
Query: 229 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
LR++E L E++YV+GT C DN T E FL + PETV + EF DY V L+ D
Sbjct: 168 LRALEADLGFERIYVIGTPCSDNTTTENFHSFLARLTDAPETVTYLEFRADYHVELRFTD 227
Query: 289 GHIEEVPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
G +P+ LP +DL D +C +C DYTN LAD+ VGYM + Q++
Sbjct: 228 GTQRLIPFLKLPLSDLPADFFPTTCRTCVDYTNRLADITVGYMA---------GEGDQWL 278
Query: 348 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVG 405
VRN+RG EML+ + + + + P S G R V V +N ++ G P + P ++
Sbjct: 279 IVRNDRGAEMLASLGDEVTLAPPGSRGKRAGSVKGFV---ENTRLAAGGLPLRRMPSWLR 335
Query: 406 NLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNR 440
++ + + +GP+G+EFAR ++ LH+ R
Sbjct: 336 GIMGWLMPRIGPRGVEFARARVEMKAAETILHLRR 370
>gi|84514573|ref|ZP_01001937.1| possible coenzyme F420 hydrogenase beta subunit [Loktanella
vestfoldensis SKA53]
gi|84511624|gb|EAQ08077.1| possible coenzyme F420 hydrogenase beta subunit [Loktanella
vestfoldensis SKA53]
Length = 410
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 188/379 (49%), Gaps = 29/379 (7%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ + AC F+ +E VHGR D+ + GV + A
Sbjct: 17 CTDCGVSRMADASACGKACQFI---KPDYPAMEARVHGRAAGMQG-DEPFFGVTGAMYRA 72
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLAR 184
+GAQWTG+ T +A +L+TG V+AV+ + + DP DR PRP +
Sbjct: 73 ALQPARQGAQWTGLTTRLAERLLETGAVDAVLTMVA----------DPADRWRPRPAIIT 122
Query: 185 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 244
++ A+G++ +P L L AAG +R+ G+ CQ+ ALR++E L E++YV+
Sbjct: 123 DAADMAEARGMRMGYAPLLALLEPARAAGHRRIAVIGIPCQIYALRALEAQLGFERIYVI 182
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
GT C DN T E FL + P+TV + EF DY V L+ DG +P+ LP DL
Sbjct: 183 GTPCSDNTTTENFHGFLARLTDAPDTVTYLEFRADYHVELRFADGSERLIPFLKLPIADL 242
Query: 305 V-DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 363
D +C +C DYTN LAD+ VGYM + Q++ VRN RG+EML +
Sbjct: 243 PRDFFPTTCRTCVDYTNRLADITVGYMA---------GEGEQWLIVRNVRGQEMLDGLGA 293
Query: 364 LLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLVGPKGLE 421
+ + S G R V V +N ++ G P + P F+ ++ + + +GP+GLE
Sbjct: 294 EVTLAAPGSRGKRAGAVKGFV---ENTRLAAGGLPLRRMPDFMRGIMGWLMPKIGPRGLE 350
Query: 422 FARYSLDYHTIRNYLHVNR 440
FAR L+ LH+ R
Sbjct: 351 FARARLEMKAAETILHLRR 369
>gi|219886623|gb|ACL53686.1| unknown [Zea mays]
gi|414869975|tpg|DAA48532.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869976|tpg|DAA48533.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869977|tpg|DAA48534.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869978|tpg|DAA48535.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 215
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/122 (75%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRG RK+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRG-RKEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQ 159
VQ
Sbjct: 162 VQ 163
>gi|350553887|ref|ZP_08923041.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodospira sibirica ATCC 700588]
gi|349789527|gb|EGZ43476.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodospira sibirica ATCC 700588]
Length = 429
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 193/414 (46%), Gaps = 34/414 (8%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP +D C+ CG+ T AC F+ + LE VHGR R D+
Sbjct: 30 PPLAAPRDRDLCTDCGISRTANPERCARACQFVKPDYA---ALEKRVHGRERNPQD-DEL 85
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+ G + + A GAQWTGI T IA +L+T V+AV+ V DP
Sbjct: 86 FFGPYTAMYQAALIHERPGAQWTGITTRIAERLLETQAVDAVLTV----------APDPQ 135
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
D P PVL P + +G++ +P L L A G RL V CQV ALR +E
Sbjct: 136 DSWRPVPVLVTDPAALRECRGMRMGYAPLLALLEPALAQGYTRLAVIAVPCQVHALRVLE 195
Query: 234 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L E+L V+G C DN T FL PE + + EF DY+V L+ DG
Sbjct: 196 PELGFERLEVIGIPCSDNTTTAHFHHFLSLLDPHPEQITYLEFRADYQVELRFTDGQKRT 255
Query: 294 VPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
+P+ LP + L P C +C DYTN+LAD+ VGYMG + Q++ VRN
Sbjct: 256 IPFLQLPLSTLSPHFFPLPCKTCVDYTNSLADITVGYMG---------GRGEQWLLVRNT 306
Query: 353 RGKEMLSLVKNLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 408
+G+ +L V L S G R R F+ T +A G P + PK++ L+
Sbjct: 307 KGQALLQQVDGELRKKDPSSEGKRHTAVRGFIQNTQRA-----AGGLPLRSTPKWIRPLV 361
Query: 409 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
A+ + +GPKGLEFAR ++ + LH+ RA R + +P + I++ Y
Sbjct: 362 AWLMPKIGPKGLEFARARVEMKAAESVLHLRRA-RPNRVAQMIPPHLWTILKPY 414
>gi|119356531|ref|YP_911175.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chlorobium
phaeobacteroides DSM 266]
gi|119353880|gb|ABL64751.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium phaeobacteroides DSM 266]
Length = 352
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 187/356 (52%), Gaps = 39/356 (10%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLA 183
A+ KP+ G+QW+G++T +A K +VE VV +Q PD +PVLA
Sbjct: 17 AQLKKPIPGSQWSGMITRMATRGFKEKLVEGVVSLQR----------TPDHHFFSQPVLA 66
Query: 184 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK--- 240
++ +E+ + +G KP LS L +L G+K++L G C + LR + + K
Sbjct: 67 QSFDEIHSTRGNKPVLSHVLYSLQTASRQGMKKILVIGAACHLHTLRDFQERFDYFKEME 126
Query: 241 LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 300
+ +G CVDN R LK S P+T H EFMQD+++H++H G +E++P+F LP
Sbjct: 127 ILTIGIPCVDNIARSKWPWVLKRMSQSPDTARHIEFMQDFRIHIRHDGGRVEKIPFFSLP 186
Query: 301 ANDLVD--VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
+L + + P+C SC D N+LAD+ VGY+ + Q+ Q++ VR E GK++
Sbjct: 187 -EELANPGIFPPACMSCVDDLNSLADITVGYLE----AKLLPDQNRQWVLVRTETGKKLP 241
Query: 359 SLVKNLLEITPTISSGDRRPFV-------METVKADDNAKMGRGPSQPAPKFVGNLIAFF 411
L++ L+ + + R FV +E++K D R + P + G+ +A
Sbjct: 242 KLIEAELDRFEEFGNRECRSFVQSSSKRIIESMKELDKEYSSR---RKIPVWFGHTLAGV 298
Query: 412 INLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHM----PSYAKKIVEMYN 463
++GPKG FARYS+D+H IR+Y +V K R +H+ P + + I+E Y
Sbjct: 299 FGMIGPKGKGFARYSVDFHLIRHYYYV-----KFRYPEHLETLVPRHVRVILEEYR 349
>gi|121998419|ref|YP_001003206.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Halorhodospira halophila SL1]
gi|121589824|gb|ABM62404.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhodospira halophila SL1]
Length = 419
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 196/403 (48%), Gaps = 25/403 (6%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CGL + AC F+ + LE HGR R + D+ + G +
Sbjct: 17 RDLCTDCGLSRSSDPKRCGRACQFIRPDYA---ALERRTHGRSRDPERPDELHFGPFRRM 73
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
A P GAQWTGI T +A +L++G V+AV+ V +D P+PV
Sbjct: 74 HQAALRTPRAGAQWTGITTRLAERLLESGRVDAVLTVTGAS----------EDPWHPQPV 123
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 241
L P ++ +G++ +P L L A G KRL + CQ LR++E L LE+L
Sbjct: 124 LVTDPAKLSQCRGMRMGYAPLLALLEPALAQGYKRLGVIALPCQTYPLRALEEELGLERL 183
Query: 242 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 301
++GT C DN +FL+ + PE V + EF DY V L+ DG E+P+ LP
Sbjct: 184 EIIGTPCSDNTPTAHFHRFLELLTPSPEAVTYLEFRADYYVELRFQDGSKREIPFLQLPI 243
Query: 302 NDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 360
+ L D +C +C DYTNALAD+ VGYM + Q+I VRNERG+ ML L
Sbjct: 244 SRLPADFWPLTCRTCVDYTNALADITVGYMA---------GRGEQWILVRNERGEAMLEL 294
Query: 361 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 420
+ + + + SSG RR ++ + G PS+ P ++ +I + VGP+GL
Sbjct: 295 LGDEVRLG-APSSGGRRDGPVQGFIDNTERAAGGMPSRGMPNWLRPIIGRLMPFVGPRGL 353
Query: 421 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 463
E AR L+ +H+ +RA +P + ++VE Y
Sbjct: 354 ELARARLEMKAAETLIHLQHQ-APRRARAMVPEHVYRLVEGYR 395
>gi|308800482|ref|XP_003075022.1| unnamed protein product [Ostreococcus tauri]
gi|116061576|emb|CAL52294.1| unnamed protein product [Ostreococcus tauri]
Length = 163
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 11/105 (10%)
Query: 56 GGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYL 115
G YP ++HCS CGLC+T ++A V+ AC FL +VVHGR R+ D+ L
Sbjct: 36 GPAYPTREHCSECGLCETEHVARVRGACEFL-----------SVVHGRARKVSPDDEDRL 84
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQS 160
GV + YA + V+G+QWTG+VT++A ML++ M E V+CV S
Sbjct: 85 GVVDGTFYAVTKQSVDGSQWTGLVTSVAKRMLESRMFEGVICVTS 129
>gi|116753495|ref|YP_842613.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Methanosaeta
thermophila PT]
gi|116664946|gb|ABK13973.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta thermophila PT]
Length = 362
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 44/275 (16%)
Query: 68 CGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKT 127
CGLC Y D F E + GR R + + LG++ + AR T
Sbjct: 59 CGLCYAYCPRSFFDMPFF-----------EKKLFGRSRASEEV----LGIYRSAMAARAT 103
Query: 128 KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTP 186
PV G Q G+VT + + L+TG+++ V +D + R P +A TP
Sbjct: 104 -PVRGKVQDGGVVTALLVHALETGVIDCAVV------------TDRNSRWQTTPKVATTP 150
Query: 187 EEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-----HHLNLEKL 241
EE++AA G K T++P++ + + +G ++ F G CQ+QALR + + E++
Sbjct: 151 EEIIAAAGTKYTIAPSIAGVQMAINSGFTKIGFTGTPCQIQALRKAQLLDEPYQFGQERI 210
Query: 242 -YVLGTNCVDNGTREGLDKFL--KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 298
++G C++N + L L + + +P V +E +Q + +G E
Sbjct: 211 ALMIGLFCMENFDYQRLMTGLVKEKMNLQPTDVERFE-IQRGMFRVISKEGTKE------ 263
Query: 299 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+P + + P C CFD+T LAD+ VG +G P
Sbjct: 264 VPLQETDEFTWPGCGPCFDFTAELADVSVGSVGSP 298
>gi|440756422|ref|ZP_20935623.1| hypothetical protein O53_4831 [Microcystis aeruginosa TAIHU98]
gi|440173644|gb|ELP53102.1| hypothetical protein O53_4831 [Microcystis aeruginosa TAIHU98]
Length = 107
Score = 85.5 bits (210), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEG 132
+D Y GVH+E++ A+K K +G
Sbjct: 66 KENDLYFGVHQEMMAAKKNKLFQG 89
>gi|284162685|ref|YP_003401308.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284012682|gb|ADB58635.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Archaeoglobus profundus DSM 5631]
Length = 337
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 51/323 (15%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P ++C CG+C Y + V + + + IE + G R+ D++ G +
Sbjct: 37 PVAENCEHCGVC--YDVCPVN----YFSESKAEIE-----IFGEKRKDDAI-----GYYR 80
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
E+L R T AQ G VT I +L++G +++ V + D+ +
Sbjct: 81 EILAGRATDENIRSKAQDGGAVTAILTYLLESGAIDSAVV------------TGRDESWN 128
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---H 234
P+P++A + E++LA+ G K T L + G K + G+ C V+A+R+ + H
Sbjct: 129 PKPIVAISKEDLLASTGSKYTQCLVLLGVKDAIKMGKKSIALVGLPCHVKAIRNAQMSGH 188
Query: 235 HLNLEKL-YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
L EK+ VLG C++ +R+ L L+ + E V ++ + + + G ++
Sbjct: 189 SLGAEKVSVVLGLFCMETFSRDLLKHKLEEIGVKIEDVEKFDIKKGK--LMAWVKGEVKT 246
Query: 294 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 353
+P +L D + SC C D+T AD+ G +G G S I +R++R
Sbjct: 247 IPL-----KELKDAVRTSCKFCNDFTAEFADISFGSVGSD--DGWST------IIIRSDR 293
Query: 354 GKEML--SLVKNLLEITPTISSG 374
G++++ ++ + LE+ P G
Sbjct: 294 GEKIVKGAVDQGYLEVQPITEKG 316
>gi|20094365|ref|NP_614212.1| coenzyme F420-reducing hydrogenase subunit beta [Methanopyrus
kandleri AV19]
gi|19887430|gb|AAM02142.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 305
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 39/272 (14%)
Query: 111 DDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
D LG H + AR T K + Q GI + + I L+ G+ + V I +
Sbjct: 12 DPELLGDHLGVFTARSTERKVTKVTQDGGIASAVMIYGLEEGLFDGV-------IAAVAD 64
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ 227
DP++ PRPV+ P+EVL A G K T PN++ L V + G +++ G CQ++
Sbjct: 65 PDDPEEPWKPRPVVITDPDEVLEAAGTKYTYCPNVSVLKEAVRSYGCEKVAMVGTPCQIR 124
Query: 228 ALRSVE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 281
A+R + H+ + ++G C++N EG+ ++ + + + K
Sbjct: 125 AVRKAQLCPIGMRHVPDKIELLIGIICMENFPYEGMKTIIEQLCGVWIREVTKMDIGNGK 184
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAP----SCYSCFDYTNALADLVVGYMGVPKYTG 337
+ DG ++ +P +D P C+ C DY L+DL G +G P G
Sbjct: 185 FWVYTKDGEVKSIP---------IDETHPFEGEPCHVCTDYCAELSDLTAGSVGSPD--G 233
Query: 338 ISMTQHPQYITVRNERGKEMLS--LVKNLLEI 367
S + VR E+ KE+L + + LLE+
Sbjct: 234 WST------VIVRTEKAKEILDDMVEQGLLEV 259
>gi|386003032|ref|YP_005921331.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta harundinacea 6Ac]
gi|357211088|gb|AET65708.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta harundinacea 6Ac]
Length = 366
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 124/278 (44%), Gaps = 44/278 (15%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
D+ CGLC Y + D + G+ V GR RR +D LG++ +
Sbjct: 54 DYDPLCGLCYAYCPRTMLD-----------MPGMAKRVFGRERR----EDEPLGIYRKAA 98
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
AR K AQ G+ T + I L+ G+++ V + DD+ P +
Sbjct: 99 SARAVKAGARAQDGGVATALLIGALEAGIIDCAVVTER------------DDKWRGLPKV 146
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-----HHLN 237
A T EE+ AA G K T++P++ + + G K++ F G CQ+QALR V+ +
Sbjct: 147 ATTAEEIAAAAGTKYTITPSVTGVQMAMDQGFKKIGFVGTPCQIQALRKVQLLEEPYQFG 206
Query: 238 LEKLYVL-GTNCVDNGTREGLDKFLKAA--SSEPETVLHYEFMQDYKVHLKHLDGH-IEE 293
EK+ +L G C++N E L L + E V +E K + L G ++E
Sbjct: 207 QEKIALLVGLFCMENFEHELLFPHLVEGKFGFKAEEVDKFEVQ---KGMFRVLSGDMVKE 263
Query: 294 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 331
VP L D D + C CFD+ LAD+ VG +G
Sbjct: 264 VP---LEETD--DYVWKGCGPCFDFAAELADVSVGSVG 296
>gi|340624110|ref|YP_004742563.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339904378|gb|AEK19820.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
Length = 282
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 36/255 (14%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIV------------ANT 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+D P +A TPEEVL+A G K T+SPN++ L V ++++ G CQV+A+R
Sbjct: 52 EDGFKAAPKIATTPEEVLSAAGTKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVRAIRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHL 284
+ H + + V+G C++N + EG+ ++ A VL + + K +
Sbjct: 112 LMKYPMGFRHTDSKIALVMGIFCMENFSYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWV 170
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
G ++ VP D SC+ C DYT LAD+ G +G P G S
Sbjct: 171 YSKSGDVKAVPL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST---- 219
Query: 345 QYITVRNERGKEMLS 359
I VR +G+E L+
Sbjct: 220 --IFVRTAKGEEYLN 232
>gi|45358380|ref|NP_987937.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
gi|44921138|emb|CAF30373.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
Length = 282
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 36/255 (14%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIVANT------------ 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+D P +A TPEEVL+A G K T+SPN++ L V ++++ G CQV+A+R
Sbjct: 52 EDGFKAAPKIATTPEEVLSAAGTKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVRAIRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHL 284
+ H + + V+G C++N EG+ ++ A VL + + K +
Sbjct: 112 LMKYPMGFRHTDSKIALVMGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWV 170
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
G ++ VP D SC+ C DYT LAD+ G +G P G S
Sbjct: 171 YSKSGDVKAVPL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST---- 219
Query: 345 QYITVRNERGKEMLS 359
I VR +G+E L+
Sbjct: 220 --IFVRTAKGEEYLN 232
>gi|21229144|ref|NP_635066.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
mazei Go1]
gi|20907706|gb|AAM32738.1| Coenzyme F420 hydrogenase, beta subunit [Methanosarcina mazei Go1]
Length = 294
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 39/271 (14%)
Query: 112 DTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYN 169
D YLG + + AR T ++ AQ GI T + + L+ G+++ +
Sbjct: 7 DPYLGKYITCVSARSTDKEILKKAQDGGIATALMVYALEEGIIDGTIVA----------- 55
Query: 170 SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQA 228
+ D PRP++A + E++L A+G K ++SP + L + G+ ++ GV CQ+QA
Sbjct: 56 GEGDRPWEPRPIVAMSREDILKARGTKYSISPQIAWLKEATRSFGLDKVGVTGVCCQMQA 115
Query: 229 LRSVE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DY 280
+R + + +N+ + +G C++N + L ++ A+ +V E + +
Sbjct: 116 VRKAQLYPINMRDVPGKVALTVGLFCMENFPYKSLQTIVEDHAAQSLGSVKKMEITKGKF 175
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
VH + G++ VP L A + P C+ C DY ++LAD+ G +G P G S
Sbjct: 176 WVHTER--GNVSTVP---LKATHKYE--QPGCHVCLDYVSSLADISTGSVGSPD--GWST 226
Query: 341 TQHPQYITVRNERGKEMLS--LVKNLLEITP 369
+ +R ++G E+ S + + E P
Sbjct: 227 ------VFIRTKKGNEVWSKAVAAGMFETKP 251
>gi|134045687|ref|YP_001097173.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132663312|gb|ABO34958.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus
maripaludis C5]
Length = 282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 36/255 (14%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIVANT------------ 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+D P +A TPEEVL+A G K T+SPN+ L V ++++ G CQV+A+R
Sbjct: 52 EDGFKAVPKIATTPEEVLSAAGTKYTVSPNIAVLKDAVREYALEKVGIVGTPCQVRAIRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHL 284
+ H + + V+G C++N EG+ ++ A VL + + K +
Sbjct: 112 LMKYPMGFRHTDSKIALVMGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWV 170
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
G ++ VP D SC+ C DYT LAD+ G +G P G S
Sbjct: 171 YSKSGDVKTVPL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST---- 219
Query: 345 QYITVRNERGKEMLS 359
I VR +G+E L+
Sbjct: 220 --IFVRTAKGEEYLN 232
>gi|73667996|ref|YP_304011.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
barkeri str. Fusaro]
gi|85682155|sp|P80490.2|FRHB_METBF RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|2463282|emb|CAA74093.1| F420-reducing hydrogenase isoenzyme II beta subunit [Methanosarcina
barkeri]
gi|72395158|gb|AAZ69431.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanosarcina
barkeri str. Fusaro]
Length = 291
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 35/271 (12%)
Query: 110 LDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++D YLG + + AR T ++ AQ GI T + + L+ G ++ +
Sbjct: 2 IEDPYLGKYVTCVSARSTDKEILKKAQDGGIATALMVYALEEGFIDGTIVA--------- 52
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQV 226
+ D P+P +A T EE+L A+G + ++SP ++ L + G+ ++ GV CQ+
Sbjct: 53 --GEGDKPWQPKPEVAMTREEILKARGTRYSISPQISWLKEATRSFGLDKVGVTGVCCQM 110
Query: 227 QALRSVE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
QA+R + + +N+ + + +G C++N + L ++ +++ + +
Sbjct: 111 QAVRKAQLYPINMRDVPGKVAFTVGLFCMENFPYKSLQSIVEDHANQSLGSVKKMEITKG 170
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
K + G++ VP L A + P C+ C DY + LAD+ G +G P G S
Sbjct: 171 KFWVYTERGNVATVP---LKATHKYE--QPGCHVCLDYVSNLADISTGSVGSPD--GWST 223
Query: 341 TQHPQYITVRNERGKEMLS--LVKNLLEITP 369
+ +R + G E+ S + + E P
Sbjct: 224 ------VFIRTKVGNEIWSKAVADGMFETKP 248
>gi|330508186|ref|YP_004384614.1| coenzyme F420 hydrogenase subunit beta [Methanosaeta concilii GP6]
gi|328928994|gb|AEB68796.1| coenzyme F420 hydrogenase subunit beta [Methanosaeta concilii GP6]
Length = 288
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 50/254 (19%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAV 155
+E+ + GR R + LG++++ + A+ AQ G+ T + + L++GM++
Sbjct: 1 MESKLLGRTRNPEE----KLGIYKKAISAQAVSREGLAQDGGVATALLVFALESGMIDCA 56
Query: 156 VCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVK 215
+ +D DD + T +E+ AA G K T++ ++N+LA G +
Sbjct: 57 IV------------TDKDDEWRTVSRVVTTADEIRAAAGTKYTINNSVNSLAEALNMGFE 104
Query: 216 RLLFCGVGCQVQALRSVE-----HHLNLEKLYVL-GTNCVDN-----------GTREGLD 258
++ F G CQ+Q LR V+ + + EK+ +L G C++N R GLD
Sbjct: 105 KIGFVGTPCQIQGLRKVQLLEEPYQIGQEKIALLVGLFCMENFDYDLLMNGLVKGRFGLD 164
Query: 259 KFLKAASSEPETVLHYEFMQD-YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFD 317
P+ V +E + ++V K G ++EV L D + C CFD
Sbjct: 165 ---------PKNVARFEIKKGMFRVIDKQ--GKVDEVK---LEETDQYNF--KGCGPCFD 208
Query: 318 YTNALADLVVGYMG 331
+ + LAD+ VG +G
Sbjct: 209 FASELADISVGSVG 222
>gi|395644720|ref|ZP_10432580.1| coenzyme F420 hydrogenase, subunit beta [Methanofollis liminatans
DSM 4140]
gi|395441460|gb|EJG06217.1| coenzyme F420 hydrogenase, subunit beta [Methanofollis liminatans
DSM 4140]
Length = 287
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++ + AR T + ++GAQ GIVT + L+ G+++ +
Sbjct: 3 LGNYKTCVAARSTDKEILKGAQDGGIVTQLFAYALEEGIIDGAIVA-----------GPS 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
D+ P P++A T E+LAA+G K TLSPN++ L + G+ R+ G CQ+QA+R
Sbjct: 52 DEPWKPEPIVATTKAELLAARGTKYTLSPNISLLKEATRSYGLDRVGIVGTPCQMQAVRK 111
Query: 232 VE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+ + + + + +G C++N + ++ + E L E ++ +
Sbjct: 112 AQLYPVGMRDVPDKIALAIGIFCMENFPYQSIEALV-----EDHCNLKMESVKKLDIGKG 166
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ E +P P C+ C DY + LAD+ G +G P
Sbjct: 167 KFWAYTERGAVAQIPLKVTHKYEQPGCHVCLDYVSNLADVSTGSVGTP 214
>gi|288561317|ref|YP_003424803.1| coenzyme F420 hydrogenase beta subunit FrhB1 [Methanobrevibacter
ruminantium M1]
gi|288544027|gb|ADC47911.1| coenzyme F420 hydrogenase beta subunit FrhB1 [Methanobrevibacter
ruminantium M1]
Length = 281
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G +++++ AR T K ++ AQ GIVT + L+ ++E + +
Sbjct: 3 FGTYKDVVSARATDKAIQKVAQDGGIVTALLTYALEENIIEGAIVA-----------GNT 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
+D P P +A TPEE++AA G K T SPN L V G++++ G CQ+ LR
Sbjct: 52 EDPWKPEPTIAMTPEEIIAAAGTKYTFSPNAIRLKEAVRQYGLEKIGTVGTPCQIMGLRK 111
Query: 232 VEHH-----LNLEKL-YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
++ + +KL ++G C++N R+ L F++ + ++ + K +
Sbjct: 112 MQSYPFATRFVADKLALIIGIFCMENFPRDSLKTFIEGKMNSSLEGVNKMDIGKGKFWIT 171
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
++G LP + C C DY LAD+ G +G P
Sbjct: 172 DVEGE------SGLPLKETHGYEQAGCNICLDYVAELADVSTGSVGSP 213
>gi|297619117|ref|YP_003707222.1| coenzyme F420 hydrogenase subunit beta [Methanococcus voltae A3]
gi|297378094|gb|ADI36249.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus voltae A3]
Length = 282
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 30/230 (13%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ ++ AR T ++ AQ GIV+ I L++ +++ V+ ++
Sbjct: 4 FGNYKTVISARATDKEILKKAQDGGIVSAAYIHGLESKLLDGVIV------------ANT 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+D + P +A TPEEVL A G K T+SPN++ L V ++++ G CQVQA+R
Sbjct: 52 EDGFNAAPKIATTPEEVLNAAGTKYTVSPNISVLKDAVREYALEKVGIVGTPCQVQAIRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H + + V+G C++N + EG+ ++ A VL + + + V+
Sbjct: 112 LMKYPMGFRHTDSKIALVMGIFCMENFSYEGMKAIVEEYAGIRMNDVLKTDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
K+ G ++ V D SC+ C DYT LAD+ G +G P
Sbjct: 172 SKY--GDVQSVKL-----KDTHMYEQKSCHICTDYTAELADISTGSVGSP 214
>gi|20089855|ref|NP_615930.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
acetivorans C2A]
gi|19914804|gb|AAM04410.1| coenzyme F420 hydrogenase, subunit beta [Methanosarcina acetivorans
C2A]
Length = 291
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 25/233 (10%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ D YLG + + AR T + ++ AQ GI TT+ + L+ G+++ V+
Sbjct: 2 VSDPYLGKYTTCISARSTDREILKKAQDGGIATTLMVYALEEGIIDGVIVA--------- 52
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQV 226
+ D PRP +A + +++L A+ K +SP ++ + + G+ ++ GV CQ+
Sbjct: 53 --GEGDLPWKPRPFVAMSRKDILKAQKAKYNISPQISWIKEATRSFGLDKVGVTGVCCQI 110
Query: 227 QALRSVE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
QA+R + + +N+ + +V+G C++N + + ++ +++ + + +
Sbjct: 111 QAVRKAQLYPINMRDVPGKIAFVVGLFCMENFLYDSIQAIVEDHTNQSLSSVKKMRIGKG 170
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
K + G++ P L A P CY C DY + L D+ G +G P
Sbjct: 171 KFQVYTERGNVATAP---LQATHKYG--QPGCYVCLDYVSNLGDISTGSVGSP 218
>gi|224102271|ref|XP_002312617.1| predicted protein [Populus trichocarpa]
gi|222852437|gb|EEE89984.1| predicted protein [Populus trichocarpa]
Length = 79
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 313
++ ++ + VHLKHLDGHIEEVPYFCLPAN+L DVIAPS Y
Sbjct: 39 WKLLEFFVVHLKHLDGHIEEVPYFCLPANELADVIAPSWY 78
>gi|126180117|ref|YP_001048082.1| coenzyme F420-reducing hydrogenase subunit beta [Methanoculleus
marisnigri JR1]
gi|125862911|gb|ABN58100.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoculleus
marisnigri JR1]
Length = 298
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++ ++ AR T + +Q GI+TT+ L+ G+++ +
Sbjct: 7 LGNYKSVISARSTDKDITKKSQDGGIITTLFAYALEEGIIDGAIVA-----------GPS 55
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
D+ P P++ T E+LAA G + T+SPNLN + + G+ R+ G CQ+QA+R
Sbjct: 56 DEPWKPEPMVVTTKAELLAAAGTRYTISPNLNLIKEATRSYGLDRVGIVGTPCQMQAVRK 115
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+ ++ + LG C++N + + L+ ++ ++ E ++ +
Sbjct: 116 AQLYPIGMRDVDDKIALALGIFCMENLSYQALEAIVEDHCNQ-----KMESVKKMDIGKG 170
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ E +P + + P C C DY LAD+ G +G P
Sbjct: 171 KFTVYTERGAVSQMPLKLIHKYVQPGCNVCLDYVANLADISSGSVGSP 218
>gi|315427054|dbj|BAJ48671.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
gi|343485722|dbj|BAJ51376.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
Length = 399
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 129/323 (39%), Gaps = 64/323 (19%)
Query: 63 DHCSRCGLCDTYYIAHVKDACA--FLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
+HC C LC +AC L D + L++ H R+D G + E
Sbjct: 90 NHCIECDLC--------VEACPELHLSDMEIGFKSLDSYAH----REDGF-----GRYGE 132
Query: 121 LLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSP 178
+ +R T ++ +Q G VT++ I LK +++A LS + P L P
Sbjct: 133 VFLSRSTNSEILKRSQDGGTVTSLLIYALKENVIDAAA-------LSTTTSEQP---LKP 182
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQALRSVEHH- 235
P L P++VL G + T +PNL LAL EA GV +L GV CQ+ LR ++H
Sbjct: 183 IPKLVFEPDDVLGCAGSRYTYAPNL--LALKEAFEKGVDKLGVVGVPCQINGLRYLQHSV 240
Query: 236 --------LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
++ +G C + T GL K+ P V + LK+
Sbjct: 241 PEIRYAEWFKQHVVFSIGLFCSEVFTYTGLMKYFNEIGVNPNDVAKINIKGKVIISLKNG 300
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
D ++ P L P+C C DY AD+ VG + H I
Sbjct: 301 DEIVK-------PLKPLHKYERPACRFCKDYAADNADISVG----------GLATHGWTI 343
Query: 348 TV-RNERGKEML--SLVKNLLEI 367
TV R GK + ++ K LEI
Sbjct: 344 TVLRTRVGKTLFEDAVSKGYLEI 366
>gi|315428121|dbj|BAJ49707.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
Length = 356
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 130/323 (40%), Gaps = 64/323 (19%)
Query: 63 DHCSRCGLCDTYYIAHVKDACA--FLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
+HC C LC +AC L D + L++ H R+D G + E
Sbjct: 47 NHCIECDLC--------VEACPELHLSDMEIGFKSLDSYAH----REDGF-----GRYGE 89
Query: 121 LLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSP 178
+ +R T ++ +Q G VT++ I LK +++A LS + P L P
Sbjct: 90 VFLSRSTNSEILKRSQDGGTVTSLLIYALKENVIDAAA-------LSTTTSEQP---LKP 139
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQALRSVEHHL 236
P L P++VL G + T +PNL LAL EA GV +L GV CQ+ LR ++H +
Sbjct: 140 IPKLVFEPDDVLGCAGSRYTYAPNL--LALKEAFEKGVDKLGVVGVPCQINGLRYLQHSV 197
Query: 237 ---------NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
++ +G C + T GL K+ P V + LK+
Sbjct: 198 PDIRYAEWFKQHVVFSIGLFCSEVFTYTGLMKYFNEIGVNPNDVAKINIKGKVIISLKNG 257
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
D ++ P L P+C C DY AD+ VG + H I
Sbjct: 258 DEIVK-------PLKPLHKYERPACRFCKDYAADNADISVG----------GLATHGWTI 300
Query: 348 TV-RNERGKEML--SLVKNLLEI 367
TV R GK + ++ K LEI
Sbjct: 301 TVLRTRVGKTLFEDAVSKGYLEI 323
>gi|52550138|gb|AAU83987.1| coenzyme F420-dependent oxidoreductase [uncultured archaeon
GZfos35B7]
Length = 360
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 39/275 (14%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
++ + LGV+ + K Q G VT + L+ G+++ +
Sbjct: 96 TVQEDVLGVYRNCYAVKSKKGDITGQDGGTVTALLAYALEEGVLDCAAITAA-------- 147
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
DD+ P+ +A +++ A G K TL P++ + G + F G+ CQ+Q
Sbjct: 148 ----DDQWRPKAKVATNYDDLKAGAGTKYTLYPSVIGVRDAIEEGHTAIGFVGLPCQIQG 203
Query: 229 LRSVE-----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFM-QDYK 281
LR V+ + + ++KL +L G C++N E LD F+ ++ E V + +D+
Sbjct: 204 LRKVQMSEQPYDVGIDKLKLLIGLFCMENFREELLD-FIAEKYTKLENVSKCDIKGKDFS 262
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 341
V+ K +P D+ D + C C D+T LAD+ VG +G + G S
Sbjct: 263 VYAKE---------KHSIPLVDIKDYVGDGCSICMDFTAELADISVGSVGSEE--GWST- 310
Query: 342 QHPQYITVRNERGKEML--SLVKNLLEITPTISSG 374
+ VR+E+G+E++ +L K +E+ G
Sbjct: 311 -----VFVRSEKGEELVKGALAKGYIEVKEIEDKG 340
>gi|88603574|ref|YP_503752.1| coenzyme F420-reducing hydrogenase subunit beta [Methanospirillum
hungatei JF-1]
gi|88189036|gb|ABD42033.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanospirillum
hungatei JF-1]
Length = 288
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 114 YLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
YLG ++ + AR T + +Q GIVT++ + L+ G+++ +
Sbjct: 3 YLGKYKSAVAARSTSAEVLRCSQDGGIVTSMFLYALEEGIIDGAIVA-----------GQ 51
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALR 230
+ P+P++A TPEE+L+++G + + PN++ L V G+ ++ G CQ+QALR
Sbjct: 52 GEKPWQPKPIVATTPEEILSSRGTRYNVCPNMSVLKESVRKYGLDKVGIVGTPCQIQALR 111
Query: 231 SVE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
+ + + L + +G C++N + + + + ++ + L + K
Sbjct: 112 KAQLYPVGLRDVCDKIALAMGIFCMENFSYQSMTQIVQDHCNVDLHSLKKTDIGKGKYWA 171
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
G + ++P + P C+ C DY LAD+ G +G P G S
Sbjct: 172 YTNRGAVSQIPLKLTHKYE-----QPGCHVCLDYVANLADISTGSVGSPD--GWST---- 220
Query: 345 QYITVRNERGKEML--SLVKNLLEITP 369
+ +RN G+ + ++ + E P
Sbjct: 221 --VFIRNNNGENIWNKAVAAGIFETKP 245
>gi|73669779|ref|YP_305794.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
barkeri str. Fusaro]
gi|2463277|emb|CAA74097.1| F420-reducing hydrogenase isoenzyme I beta subunit [Methanosarcina
barkeri]
gi|72396941|gb|AAZ71214.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanosarcina
barkeri str. Fusaro]
Length = 291
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 39/273 (14%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++D YLG + + AR T + ++ AQ GI T + + L+ G+++ +
Sbjct: 2 IEDPYLGKYVTCVSARSTDKEILKKAQDGGIATALMVYALEQGIIDGAIVA--------- 52
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQV 226
D PRP +A + E++L A+ K +SP ++ L + G+ ++ GV CQ+
Sbjct: 53 --GKGDLPWKPRPFVAMSREDILKAQRAKYNISPQISWLKEATRSFGLDKVGITGVCCQM 110
Query: 227 QALRSVE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ- 278
QA+R + + +N+ + + +G C+ N + + ++ A+ +V EF +
Sbjct: 111 QAVRKAQLYPINMRDVPGKVAFAVGLFCMVNFPYDSIQALVEDHANQSLSSVKKMEFGKG 170
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
+ VH + G++ VP + P C+ C DY + LAD+ G +G P G
Sbjct: 171 KFFVHTER--GNVATVPL-----KETHKYEQPGCHVCLDYVSNLADISTGSVGSP--GGW 221
Query: 339 SMTQHPQYITVRNERGKEMLS--LVKNLLEITP 369
S + +R + G E+ S + + L E P
Sbjct: 222 ST------VFIRTKVGNEIWSKAVAEGLFETKP 248
>gi|397780547|ref|YP_006545020.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
gi|396939049|emb|CCJ36304.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
Length = 295
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++ ++ AR T ++ AQ GI+TT+ L+ G+++ +
Sbjct: 4 LGNYKSVISARSTDRDILKKAQDGGIITTLFAYALEEGIIDGAIVA-----------GPG 52
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
D+ P P++ T E+LAA G + T+SPNL+ + + G+ R+ G CQ+QA+R
Sbjct: 53 DEPWKPEPMVVTTKAELLAAAGTRYTISPNLSLIKEATRSYGLDRVGIVGTPCQIQAVRK 112
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+ ++ + LG C++N + + L+ ++ ++ E + +
Sbjct: 113 AQVYPIGMRDVDDKIALALGIFCMENLSYQALEAMVEDHCNQ-----KMESVTKMDIGKG 167
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ E +P + + P C C DY LAD+ G +G P
Sbjct: 168 KFTVYTERGAVAQMPLKLIHKYVQPGCNVCLDYVANLADISSGSVGSP 215
>gi|340624695|ref|YP_004743148.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339904963|gb|AEK20405.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
Length = 282
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII------------ADKEDGFAAAPKVATTREEILNA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T+ PNL+ + + V G +L F G CQV+++R H+ + ++G
Sbjct: 72 AGTKYTVCPNLSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPIGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N G+ ++ + + V+ + + + V+ K D +P D
Sbjct: 132 IFCMENFPYNGMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKWGD-------VKTIPLKD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
SC+ C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 185 THPYEQGSCHVCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|150398835|ref|YP_001322602.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
vannielii SB]
gi|150011538|gb|ABR53990.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus vannielii SB]
Length = 282
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G + + + AR T ++ +Q GI++ I L++G+++ V+ ++
Sbjct: 4 FGTYNKAISARATDKAILKKSQDGGIISASYIYGLESGLLDGVIV------------ANT 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+ P + TPEEVL A G K T+SPN++ L V ++++ G CQVQA+R
Sbjct: 52 EKGFKAVPKIVTTPEEVLNAAGTKYTISPNVSVLKDAVREYALEKVGIVGTPCQVQAIRK 111
Query: 232 V------EHHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H + + +LG C++N EG+ ++ A VL + + + V+
Sbjct: 112 LIKYPMGFRHTDSKIALILGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
K EV L + + SC+ C DYT LAD+ G +G P
Sbjct: 172 SKS-----GEVKTVALKDTHMYE--QKSCHVCMDYTAELADISTGSVGSP 214
>gi|45358948|ref|NP_988505.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
gi|45047814|emb|CAF30941.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
Length = 282
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII------------ADKEDGFAAAPKVATTREEILNA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T+ PNL+ + + V G +L F G CQV+++R H+ + ++G
Sbjct: 72 AGTKYTVCPNLSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N G+ ++ + + V+ + + + V+ K D +P D
Sbjct: 132 IFCMENFPYNGMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKWGD-------VKTIPLKD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
SC+ C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 185 THPYEQGSCHVCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|219850772|ref|YP_002465204.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosphaerula
palustris E1-9c]
gi|219545031|gb|ACL15481.1| coenzyme F420 hydrogenase, subunit beta [Methanosphaerula palustris
E1-9c]
Length = 291
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 110 LDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ D +LG + ++ AR T ++GAQ GIVT + L+ G+++ +
Sbjct: 2 VSDNFLGNYASVVAARSTDKSILKGAQDGGIVTQLFAYALEEGIIDGAIVA--------- 52
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQV 226
D+ P PV+A T EE+LAA+G K +SPN+ + + G+ ++ G CQ+
Sbjct: 53 --GPGDEPWKPVPVVATTVEELLAARGTKYNISPNMQLIKEATRSYGLDKVGIVGTPCQI 110
Query: 227 QALRSVE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQD 279
QALR + + + L + +G C++N + + + ++ A+++ E V + +
Sbjct: 111 QALRKGQLYPVGLRDVPDKIALAVGIFCMENFPYQSIVQLVEDHANTKLENVTKMDIGKG 170
Query: 280 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
K + G ++P + C+ C DY + LAD+ G +G P
Sbjct: 171 -KFWVYTGRGASVQLPLKITHKYE-----QAGCHVCLDYVSNLADVSTGSVGTP 218
>gi|1706904|sp|Q00391.1|FRHB_METVO RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|809731|emb|CAA43499.1| F420-reducing hydrogenase subunit [Methanococcus voltae PS]
Length = 280
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 55/264 (20%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ + AR T ++ AQ G V+ I L++ +++ V +D
Sbjct: 3 FGNYKTAISARATDKEILKKAQDGGYVSAAHIYGLESKLLDGVSVA-----------ADT 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+D + P +A TPEEVL A G K T+SPN++ L V ++++ G CQVQA+R
Sbjct: 52 EDGCNAAPKVATTPEEVLNAAGAKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVQAIRK 111
Query: 232 VEHH----LNLEKLYVLGTNCVDNGTREG------------LDKFLKAASSEPETVLHYE 275
+ + + + V+G C++N + EG +D LK + + ++ +
Sbjct: 112 LIKYPMGFRHTDSRIVMGIFCMENFSYEGMKAIVEEYAGIRMDDVLKTDIGKGKFWVYSK 171
Query: 276 FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY 335
+ V LK D H+ E SC+ C DYT LAD+ G +G P
Sbjct: 172 YGDVKSVKLK--DTHMYE---------------QKSCHICTDYTAELADISTGSVGSP-- 212
Query: 336 TGISMTQHPQYITVRNERGKEMLS 359
G S I +R E+G+ ++
Sbjct: 213 DGWST------IFIRTEKGEAYIN 230
>gi|84490093|ref|YP_448325.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosphaera
stadtmanae DSM 3091]
gi|84373412|gb|ABC57682.1| FrhB [Methanosphaera stadtmanae DSM 3091]
Length = 298
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 110 LDDTYLGVHEELLYAR--KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
+ D+ LG H+E++ A+ K + AQ GIV+ I I L+ +++ +
Sbjct: 2 IQDSVLGPHQEIITAKAADNKVLSKAQDGGIVSAILIYALEENIIDGTIVA--------- 52
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQV 226
D+ P P++A T +E+L G K T+ PNL+ + G++++ G CQV
Sbjct: 53 --GPGDEPWKPEPLVATTKKEILKGAGTKYTMCPNLSVIKEATREYGLEKIGTVGTPCQV 110
Query: 227 QALRSVEHH-LNLEKL-----YVLGTNCVDNGTREGLDKFLK-AASSEPETVLHYEFMQD 279
LR ++ + L + + +G C++N E L F+ P V +
Sbjct: 111 MGLRKMQTYPLGVRNVVDKIALSIGIYCMENFPYESLKTFINDKVGVTPSQVTKMNITKG 170
Query: 280 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
K+ + H G + +P + C C DY L+DL G +G
Sbjct: 171 -KLFITHTGGEGK------IPLKETHGYEQAGCNYCMDYVAELSDLSCGSVGA------- 216
Query: 340 MTQHPQYITV--RNERGKEML--SLVKNLLEITPT 370
P + T+ R ++G ++ ++ + +LE T T
Sbjct: 217 ---KPGWSTIIKRTDKGASLIDKAIKEGVLETTET 248
>gi|307352754|ref|YP_003893805.1| coenzyme F420 hydrogenase subunit beta [Methanoplanus petrolearius
DSM 11571]
gi|307155987|gb|ADN35367.1| coenzyme F420 hydrogenase, subunit beta [Methanoplanus petrolearius
DSM 11571]
Length = 287
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 39/242 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
+Q GIVT + L+ G+++ + + D+ P PV+A T E+LAA
Sbjct: 23 SQDGGIVTQLFTYALEEGIIDGAIVA-----------APGDEPWKPEPVVATTKAELLAA 71
Query: 193 KGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSVE-HHLNLEKL-----YV 243
+G K T+SPN+ + + EA G+ ++ G CQ+QALR + + + + K+
Sbjct: 72 RGTKYTISPNM--MLIKEATRSYGLDKVGIVGTPCQMQALRKAQLYPMAMRKVPDKIALA 129
Query: 244 LGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPA 301
+G C++N GL+ ++ ++ E+ + + + + V+ + G + ++P L A
Sbjct: 130 IGIFCMENFPYMGLETIVEDHCQTKMESAVKMDIGKGKFSVYTER--GALSQIP---LAA 184
Query: 302 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
+ P C+ C DY LAD+ G +G P G S + VR ++G+++ S
Sbjct: 185 THKYE--QPGCHVCLDYVANLADVSTGSVGSPD--GWST------VFVRTKKGEDVWSKA 234
Query: 362 KN 363
N
Sbjct: 235 VN 236
>gi|296109197|ref|YP_003616146.1| coenzyme F420 hydrogenase, subunit beta [methanocaldococcus
infernus ME]
gi|295434011|gb|ADG13182.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus
infernus ME]
Length = 282
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 58/246 (23%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ GIV+T+ I L+ +++ VV +D +D P+P +A TPEEV+ A
Sbjct: 24 AQDGGIVSTLFIYALENNILDGVVV------------ADKEDEFLPKPKVATTPEEVIEA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH------LNLEKLYVLG 245
G K ++ PN+ + G +++ G CQ++A+R + +N+E +++G
Sbjct: 72 AGTKYSVCPNIAEIKKAAREYGCEKIGVVGTPCQIRAVRKAMKYPVGFRGVNIE--FLIG 129
Query: 246 TNCVDNGTREGL------------DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
C++N GL + +K + + ++ + + V LK E
Sbjct: 130 IFCMENFPYNGLRVIVEELCGVKMEDVVKLDIGKGKFWVYTRWGETKTVKLK------ET 183
Query: 294 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 353
PY SC+ C DYT LAD+ G +G P G S + +R +
Sbjct: 184 HPYE-----------QSSCHVCTDYTAELADVSTGSVGSP--DGWST------VFIRTVK 224
Query: 354 GKEMLS 359
GKE+ S
Sbjct: 225 GKEIFS 230
>gi|374628811|ref|ZP_09701196.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906924|gb|EHQ35028.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 287
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++ ++ AR ++ +Q GIVT + L+ G+++ +
Sbjct: 3 LGNYKSVISARAADAEILKRSQDGGIVTQLFAYALEEGIIDGAIVA-----------GPG 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
D+ P PV+A T E+LAA+G + T+SPN+ + + G+ ++ G CQ+QALR
Sbjct: 52 DEPWKPEPVVATTRAELLAARGTRYTISPNMMLIKEATRSYGLDKVGIVGTPCQMQALRK 111
Query: 232 VE-HHLNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+ + + + K+ +G C++N +GL+ + E + E +
Sbjct: 112 AQLYPMAMRKVPDKIALAIGIFCMENFPYQGLEAIV-----EDHCNVKMESADKMDIGKG 166
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ E +P P C+ C DY LAD+ G +G P
Sbjct: 167 KFSVYTERGAISQIPLKATHKYEQPGCHVCLDYVANLADVSTGSVGSP 214
>gi|159905671|ref|YP_001549333.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C6]
gi|159887164|gb|ABX02101.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus maripaludis
C6]
Length = 282
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII------------ADKEDGFAAAPKVATTREEILNA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T+ NL+ + + V G +++ F G CQVQ++R H+ + ++G
Sbjct: 72 AGTKYTVCSNLSVIKSAVREYGCEKVGFVGTPCQVQSIRKAIKYPVGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N G+ ++ + + V+ + + + V+ K D +P D
Sbjct: 132 IFCMENFPYNGMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKWGDVK-------TIPLKD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
SC+ C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 185 THPYEQISCHVCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|73667804|ref|YP_303819.1| F420H2 dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro]
gi|72394966|gb|AAZ69239.1| F420H2 dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro]
Length = 346
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 31/249 (12%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
+A ++K G+Q G+ + I + K G ++ V + D++ + V
Sbjct: 82 FFAARSKENAGSQDGGVTSGILKSLFKQGKIDCAVGITR------------DEKWESKVV 129
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHHLNLEK 240
L + E+V +G K T P + AL EA R+ GV CQ + R + +++ +
Sbjct: 130 LLTSAEDVEKVRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHSARLIRENVSEKI 187
Query: 241 LYVLGTNCVDNGTRE-GLDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 298
+ ++G C+++ + LDK + + + E V EF + K + DG + VP
Sbjct: 188 VLIIGLLCMESFHHDVMLDKIIPEIMKVKIEDVRKMEFTKG-KFWVYTSDGEVHSVPI-- 244
Query: 299 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
D+ C+ C DYT+ AD+ VG +G P + +R + G+E
Sbjct: 245 ---KDVAKYARNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTDAGEEYF 293
Query: 359 SLVKNLLEI 367
+V+ +EI
Sbjct: 294 EMVREEMEI 302
>gi|134045238|ref|YP_001096724.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132662863|gb|ABO34509.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus
maripaludis C5]
Length = 282
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L+A
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII------------ADKEDGFAAVPKVATTREEILSA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T+ NL+ + + V G +L F G CQV+++R H+ + ++G
Sbjct: 72 AGTKYTVCSNLSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N G+ ++ + + V+ + + + V+ K G ++ VP D
Sbjct: 132 IFCMENFPYNGMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKW--GDVKTVPL-----KD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
SC+ C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 185 THPYEQGSCHVCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|150399446|ref|YP_001323213.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
vannielii SB]
gi|150012149|gb|ABR54601.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus vannielii SB]
Length = 282
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
+Q GI++ I L+ G+++ V+ +D +D+ + P +A T +EVL+A
Sbjct: 24 SQDGGIISAAYIYGLENGLLDGVIV------------ADKEDKFTAVPKVATTKDEVLSA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T PNL+ + + V G ++ F G CQ+Q++R H+ + ++G
Sbjct: 72 AGTKYTTCPNLSVIKSAVREYGCDKIGFVGTPCQIQSIRKAIKYPIGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N G+ ++ E V+ + + + V+ K G ++ V D
Sbjct: 132 IFCMENFPYNGMKTIVEELCGVRMEDVVKTDIGKGKFWVYTKW--GDVKTVAL-----KD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
SC+ C DYT LADL G +G P
Sbjct: 185 THPYEQVSCHICMDYTAELADLSTGSVGSP 214
>gi|150402554|ref|YP_001329848.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C7]
gi|150033584|gb|ABR65697.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C7]
Length = 282
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 36/236 (15%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L+A
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII------------ADKEDGFAAAPKVATTREEILSA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T+ NL+ + + V G +++ F G CQV+++R H+ + ++G
Sbjct: 72 AGTKYTVCSNLSVVKSAVREYGCEKVGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N G+ ++ + + V+ + + + V+ K G ++ VP D
Sbjct: 132 IFCMENFPYNGMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKW--GDVKTVPL-----KD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
SC+ C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 185 THPYEQMSCHVCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|268323745|emb|CBH37333.1| conserved hypothetical protein, coenzyme F420-reducing hydrogenase
beta subunit related [uncultured archaeon]
Length = 360
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
++ + LGV+ + K Q G VT + L+ G+++ +
Sbjct: 96 TVQEDILGVYRNCYAVKSKKGDITGQDGGTVTALLAYALEEGVLDCAAITAA-------- 147
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 228
DD+ P+ +A ++ A G K TL P++ + G + F G+ CQ+Q
Sbjct: 148 ----DDQWRPKTKVATNNADLKAGAGTKYTLYPSVIGVRDAIEEGHTAIGFVGLPCQIQG 203
Query: 229 LRSVE-----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 282
LR V+ + + ++KL +L G C++N E LD ++ ++ E V K
Sbjct: 204 LRKVQMSEQPYDVGIDKLKLLIGLFCMENFREELLD-YIAEKYTQLENV--------SKC 254
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
+K + + +P D+ D + C C D+T LAD+ VG +G + G S
Sbjct: 255 DIKGKEFSVYANEKHSIPLEDIKDYVGDGCSICMDFTAELADISVGSVGSEE--GWST-- 310
Query: 343 HPQYITVRNERGKEMLSLVKN 363
+ VR+E G+E++ ++
Sbjct: 311 ----VFVRSESGEELVKGARD 327
>gi|21226729|ref|NP_632651.1| F420H2 dehydrogenase subunit F [Methanosarcina mazei Go1]
gi|452209214|ref|YP_007489328.1| Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
[Methanosarcina mazei Tuc01]
gi|20905018|gb|AAM30323.1| F420H2 dehydrogenase subunit FpoF [Methanosarcina mazei Go1]
gi|452099116|gb|AGF96056.1| Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
[Methanosarcina mazei Tuc01]
Length = 346
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 117 VHEELLYARK-----TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
+ ELL RK +K G+Q G+ + I + G ++ V +
Sbjct: 72 IENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITR----------- 120
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALR 230
++ P VL + E+V +G K T P + AL EA R+ GV CQ A R
Sbjct: 121 -NENWEPEVVLLTSAEDVERTRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHAAR 177
Query: 231 SVEHHLNLEKLYVLGTNCVDNGTRE-GLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHL 287
+ ++N + + ++G C+++ + LDK + + ++ EF + + V+ K
Sbjct: 178 LIRENVNEKIVLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTK-- 235
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG + VP D+ C+ C DYT+ AD+ VG +G P +
Sbjct: 236 DGEVHSVPI-----KDIAKYARNPCHHCCDYTSVFADISVGSVGAP--------DGWNSV 282
Query: 348 TVRNERGKEMLSLVKNLLEI 367
+R E G++ +V++ +EI
Sbjct: 283 FIRTEIGEKYFDMVRDEMEI 302
>gi|297619513|ref|YP_003707618.1| coenzyme F420 hydrogenase subunit beta [Methanococcus voltae A3]
gi|297378490|gb|ADI36645.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus voltae A3]
Length = 282
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
+Q GIV+ I L++G+++ V+ +D + P +A T +EVL+A
Sbjct: 24 SQDGGIVSAAYIHGLESGLLDGVIV------------ADKGEDFCAVPKVATTVDEVLSA 71
Query: 193 KGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T SPNL+ L V G ++ F G CQVQ++R + H+ + V+G
Sbjct: 72 AGTKYTTSPNLSVLKNAVREYGCDKVGFVGTPCQVQSIRKMLKYPVGYRHVPDKIALVMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N GL ++ + E V + + + V+ K D + D
Sbjct: 132 IFCMENFPYNGLKTIVEEHCGIKMEDVAKTDIGKGKFWVYSKWGD-------VKTIKLKD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
SC+ C DYT LAD+ G +G P
Sbjct: 185 THPYEQQSCHVCMDYTAELADISTGSVGSP 214
>gi|357037825|ref|ZP_09099624.1| Coenzyme F420 hydrogenase [Desulfotomaculum gibsoniae DSM 7213]
gi|355360381|gb|EHG08139.1| Coenzyme F420 hydrogenase [Desulfotomaculum gibsoniae DSM 7213]
Length = 366
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 46/283 (16%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKT-KPVEGAQWTGIVTTIAIEMLKTGMVEA 154
++ V GR R +D LGV + + +AR GAQ+ G+ T +A L+ G++
Sbjct: 64 MDRAVFGRER-----EDQALGVLQGIYFARAAGDKAPGAQYGGVTTALAALALRQGLISG 118
Query: 155 VVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV 214
V + D+ P P LART EV A G K P L L G+
Sbjct: 119 AVLT----------GGEADN---PHPALARTAGEVYACAGSKYVGVPTLAELNRALRDGL 165
Query: 215 KRLLFCGVGCQVQALRSVEH------HLNLEKL--YVLGTNCVDNGTREGLDKFLKAASS 266
L G CQV A+R ++ N+ VLG C + T + FL +
Sbjct: 166 TGLGVVGRPCQVAAVRKMQQGNLPGAQFNVPGAVELVLGLFCFASLTPD-FYSFL-SGQV 223
Query: 267 EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 326
+ E V+ + +D V + + +DL I +C C D T+ AD+
Sbjct: 224 QGEKVIKMDIPEDGPVVETSAGSYRWSM-------DDLRPYIHKACNLCLDPTSEWADIA 276
Query: 327 VGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV--KNLLEI 367
VG + + VR++RG+++L+L K ++EI
Sbjct: 277 VG--------ATEYDRAWNTLVVRSDRGRDLLNLALDKGVIEI 311
>gi|20092529|ref|NP_618604.1| F420H2 dehydrogenase subunit F [Methanosarcina acetivorans C2A]
gi|19917799|gb|AAM07084.1| F(420)H(2) dehydrogenase, subunit FpoF [Methanosarcina acetivorans
C2A]
Length = 346
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
+ ++K G+Q G+ + I + K G ++ V + +++ P V
Sbjct: 82 FFGARSKDNVGSQDGGVASGILKSLFKQGKIDCAVGITR------------NEKWEPEVV 129
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHHLNLEK 240
L + E+V +G K T P L AL EA R+ GV CQ A + ++N +
Sbjct: 130 LLTSAEDVERTRGTKYTSDPVL--AALREAFEKYDRIAVIGVPCQAHAAHLIRENVNEKI 187
Query: 241 LYVLGTNCVDNGTRE-GLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYF 297
+ ++G C+++ + L+K + + + E + EF + + V+ K DG + VP
Sbjct: 188 VLIIGLLCMESFHHDVMLEKIIPEILKVKLEDIRKMEFTKGKFWVYTK--DGEVHSVPI- 244
Query: 298 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 357
D+ C+ C DYT+ AD+ VG +G P + +R E G++
Sbjct: 245 ----KDVAKFARNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKY 292
Query: 358 LSLVKNLLEI 367
+V+ +EI
Sbjct: 293 FDMVREDMEI 302
>gi|256811179|ref|YP_003128548.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
fervens AG86]
gi|256794379|gb|ACV25048.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus fervens
AG86]
Length = 282
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 60/278 (21%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G +++++ AR T + ++ +Q GIV+T I L+ +++ VV +D
Sbjct: 4 FGAYKKVVSARSTLKEVLKKSQDGGIVSTAFIYGLENNLLDGVVV------------ADN 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
P +A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R
Sbjct: 52 AGEFQAVPKVATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVRAIRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGL------------DKFLKAASSEPETVLH 273
+ H+ + V+G C++N GL + +K + + ++
Sbjct: 112 LMKYPVGFRHVPDKIALVIGIFCMENFPYNGLKLIVEEHCGVKMEDVVKMDIGKGKFWVY 171
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ + V LK E PY + +C+ C DYT LAD+ G +G P
Sbjct: 172 TRWGETKTVKLK------ETHPYEQI-----------ACHVCTDYTAELADISTGSVGSP 214
Query: 334 KYTGISMTQHPQYITVRNERGKEMLS-LVKN-LLEITP 369
G S + +R +G+E+ + +V++ LE+ P
Sbjct: 215 --DGWST------VFIRTAKGEEIFNKMVEDGYLEVKP 244
>gi|298528806|ref|ZP_07016210.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfonatronospira thiodismutans ASO3-1]
gi|298512458|gb|EFI36360.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfonatronospira thiodismutans ASO3-1]
Length = 432
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 74/327 (22%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSR-------------------IEGLETVVHGR 103
D C CG C T+ A A DG+ R +E L+ ++
Sbjct: 15 DRCHMCGGCVTFCTAINYGALEIGEDGLPRYKDQNSCLECGICYMLCPEVEELDVEINSL 74
Query: 104 GRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
++ + +L AR + ++ A G VT I + ++++G ++ V ++ +
Sbjct: 75 ANWEEPAGKI---ISSSILRARDRQVLDRATDGGAVTAILLHLMESGRIDGAVVSRNKGL 131
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK--------------PTLSPNLNTLALV 209
+ P+LART E++L G T SP++ L V
Sbjct: 132 FNR------------EPMLARTSEQILECCGSYFDVSHGTYHYGTQYSTYSPSVQALGDV 179
Query: 210 EAAGVKRLLFCGVGCQVQALRSVEHH--LNLEKLY-VLGTNCV-----DNGTREGLDKFL 261
+ G + + F G CQV+ LR ++ + + +Y VLG C D+ +R+ L+K
Sbjct: 180 KTQGFRSIAFVGTPCQVRTLRKMQALGVVPADAIYCVLGLFCTGNFEFDDNSRKRLEKTG 239
Query: 262 KAASSEPETV----LHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFD 317
+ + + + + Y +MQD +H LP ++L + +C C D
Sbjct: 240 EFSWKDVQKINVTDKVYIYMQDGSIH--------------ALPLDELDFIKRRACNYCHD 285
Query: 318 YTNALADLVVGYMGVPKYTGISMTQHP 344
Y+ LADL G +G +T+ P
Sbjct: 286 YSAELADLSFGGVGSDDGWTTVLTRSP 312
>gi|44708|emb|CAA43503.1| F420-reducing hydrogenase subunit [Methanococcus voltae PS]
Length = 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 48/276 (17%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
+Q GIV+ I L++G+++ V+ D + P + T +EVL+A
Sbjct: 24 SQDGGIVSAAYIHGLESGLLDGVIV------------RDKGEDFCAIPKVLTTVDEVLSA 71
Query: 193 KGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLG 245
G K T SPNL+ L + V G ++ F G CQVQ++R + H+ + ++G
Sbjct: 72 AGTKYTTSPNLSVLKSAVREYGCDKVGFVGTPCQVQSIRKMLKYPVGYRHVPDKIALIMG 131
Query: 246 TNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAND 303
C++N GL ++ + E V + + + V+ K D + D
Sbjct: 132 IFCMENFPYNGLKTIIEEHCGIKMEDVAKTDIGKGKFWVYSKWGD-------VKTIKLKD 184
Query: 304 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL--- 360
SC+ C DYT LAD+ G +G P G S I +R +G+
Sbjct: 185 THPYEQHSCHVCMDYTAELADISTGSVGSP--DGWST------IFIRTAKGEAFYKAMEE 236
Query: 361 -----VKNLLEITPTISSGDRRPFVMETVKADDNAK 391
+KN+ ++ P + ++ ++ K D+N K
Sbjct: 237 AGVIEIKNIDDVKPGLGLVEK----LDNSKKDNNGK 268
>gi|289192423|ref|YP_003458364.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus sp.
FS406-22]
gi|288938873|gb|ADC69628.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus sp.
FS406-22]
Length = 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 40/268 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D
Sbjct: 4 FGAYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV------------ADN 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
P +A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R
Sbjct: 52 AGEFKAVPKVATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVRAVRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H+ + ++G C++N GL ++ + E V+ + + + V+
Sbjct: 112 LMKYPVGFRHVPDKIALIIGIFCMENFPYNGLKLIVEEHCGVKMEDVVKMDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
+ E L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 172 TRW-----GETKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST--- 219
Query: 344 PQYITVRNERGKEMLS-LVKN-LLEITP 369
+ +R +G+E+ + +V++ LE+ P
Sbjct: 220 ---VFIRTAKGEEIFNKMVEDGYLEVKP 244
>gi|333911073|ref|YP_004484806.1| coenzyme F420 hydrogenase subunit beta [Methanotorris igneus Kol 5]
gi|333751662|gb|AEF96741.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris igneus Kol
5]
Length = 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 40/268 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ ++ AR T K ++ +Q GIV+ I L+ G+++ V+ +D
Sbjct: 4 FGKYKTVVSARATDKKILKKSQDGGIVSAAFIYGLENGLLDGVIV------------ADN 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
P +A TPEEVL A G K T+ PN++ L + V ++++ G CQ++A+R
Sbjct: 52 AGEFKAVPKVATTPEEVLEAAGTKYTVCPNISVLKSAVREYALEKVGIVGTPCQIRAVRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H + + +G C++N GL ++ + E V+ + + + V+
Sbjct: 112 LMKYPVGFRHTDSKIALTIGIFCMENFPYMGLKTIVEEHCGVKMEDVVKMDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
K E L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 172 TKW-----GETKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSPD--GWST--- 219
Query: 344 PQYITVRNERGKEMLS-LVKN-LLEITP 369
+ VR RG+E + +V++ LEI P
Sbjct: 220 ---VFVRTIRGEEFFNKMVEDGYLEIKP 244
>gi|374635417|ref|ZP_09707016.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris formicicus
Mc-S-70]
gi|373562290|gb|EHP88505.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris formicicus
Mc-S-70]
Length = 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 40/268 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ ++ AR T + ++ +Q GIV+ I L+ +++ VV +D
Sbjct: 4 FGKYKTVVSARATDKRILKKSQDGGIVSAAFIYGLENNLLDGVVV------------ADK 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
+D P +A TPEE+L A G K T+ PN++ L + V ++++ G CQ++A+R
Sbjct: 52 EDGFKAIPKVATTPEEILEAGGTKYTVCPNISVLKSAVREYALEKVGVVGTPCQIRAVRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H + + ++G C++N GL ++ + + E V+ + + + V+
Sbjct: 112 LMKYPVGFRHTDSKIALLIGIFCMENFPYNGLKLIVEEHCNVKIEDVVKMDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
K E L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 172 TKW-----GETKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST--- 219
Query: 344 PQYITVRNERGKEMLS-LVKN-LLEITP 369
+ +R RG+E + +V++ LE+ P
Sbjct: 220 ---VFIRTARGEEFFNKMVEDGYLEVKP 244
>gi|336121173|ref|YP_004575948.1| coenzyme F420 hydrogenase subunit beta [Methanothermococcus
okinawensis IH1]
gi|336121875|ref|YP_004576650.1| coenzyme F420 hydrogenase subunit beta [Methanothermococcus
okinawensis IH1]
gi|334855694|gb|AEH06170.1| coenzyme F420 hydrogenase, subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856396|gb|AEH06872.1| coenzyme F420 hydrogenase, subunit beta [Methanothermococcus
okinawensis IH1]
Length = 282
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 60/278 (21%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ ++ AR T K ++ +Q GIV++ I L+ +++ V+ +D
Sbjct: 4 FGNYKTIISARATDKKILKKSQDGGIVSSAFIYGLENNLLDGVIV------------ADK 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
+ P P +A TPEEVL A G K T+ PN++ L + + G ++L G CQV A R
Sbjct: 52 GEGCKPVPKVATTPEEVLKAGGTKYTVCPNISVLKSAIREYGCEKLGVVGTPCQVIATRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGL------------DKFLKAASSEPETVLH 273
H+ + ++G C++N G+ D K + + ++
Sbjct: 112 AMKYPVGFRHMPDKIALIMGIFCMENFPYNGMKTIIEEHCGVKIDDVAKLDIGKGKFWVY 171
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
++ + + LK E PY +C+ C DYT LAD+ G +G P
Sbjct: 172 TKWGEAKSIKLK------ETHPYE-----------QKACHVCTDYTAELADISTGSVGSP 214
Query: 334 KYTGISMTQHPQYITVRNERGKEMLSLV--KNLLEITP 369
G S + +R +G+E + + + LE P
Sbjct: 215 --DGWSS------VFIRTSKGEEFFNKMVDEGYLETKP 244
>gi|124484841|ref|YP_001029457.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocorpusculum
labreanum Z]
gi|124362382|gb|ABN06190.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanocorpusculum labreanum Z]
Length = 290
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
+Q GIVT + L+TG+++ + ++P P P++A T EE+ A+
Sbjct: 24 SQDGGIVTAMFAYALETGIIDGAIVAGP--------GAEP---YKPEPMIATTVEELFAS 72
Query: 193 KGVKPTLSPNLNTLALVEAA----GVKRLLFCGVGCQVQALRSVE-HHLNLEKL-----Y 242
+G K ++SPN LAL++ A G+ ++ G CQ+QA+R + + + L +
Sbjct: 73 RGTKYSVSPN---LALIKEATRSYGLDKIGIVGTPCQIQAVRKAQLYPIGLRDVPDKIAL 129
Query: 243 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 302
LG C++N +GL + + E + + + + E +P
Sbjct: 130 ALGIFCMENFPYQGLFQMV-----EDHCATKIDNVTKMDIGKGKFSVYTERGVNSQIPLK 184
Query: 303 DLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
P C+ C DY +AD+ G +G P
Sbjct: 185 VTHKYEQPGCHVCLDYVANMADISTGSVGTP 215
>gi|261403396|ref|YP_003247620.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
vulcanius M7]
gi|261370389|gb|ACX73138.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus
vulcanius M7]
Length = 282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 40/268 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D
Sbjct: 4 FGTYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV------------ADN 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
P +A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R
Sbjct: 52 AGEFRAIPKVATTPEEVLEAAGTKYTVCPNVSVLKSAVREYGCEKIGVVGTPCQVRAVRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H+ + ++G C++N GL ++ + E V+ + + + V+
Sbjct: 112 LMKYPIGFRHIPDKISLIIGIFCMENFPYYGLKLIVEEHCGVKMEDVVKLDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
K G + V L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 172 TKW--GETKAVK---LKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST--- 219
Query: 344 PQYITVRNERGKEMLS-LVKN-LLEITP 369
+ +R +G+E+ + +V++ LE+ P
Sbjct: 220 ---VFIRTAKGEEIFNKMVEDGYLEVKP 244
>gi|408380956|ref|ZP_11178506.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobacterium
formicicum DSM 3637]
gi|407816221|gb|EKF86783.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobacterium
formicicum DSM 3637]
Length = 294
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T K ++ AQ GIV+ + L G+++ V + P
Sbjct: 3 LGTYKEVVAARSTDKQIQKLAQDGGIVSGLFCYALDEGLIDGAVV------------AGP 50
Query: 173 DDRL-SPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 230
D + P P++A + +E+LAA G K T SPN+ L V G+++L + CQ +R
Sbjct: 51 SDVMWKPEPMVAMSSDEILAAAGTKYTFSPNVWMLKKAVRQYGLEKLGTVAIPCQSMGIR 110
Query: 231 SVEHH------LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
++ + + + +LG C++N E L F+ + ++ + K +
Sbjct: 111 KMQSYPFGVKNVASKIALMLGIFCMENFPYESLRTFISEKAGVDFDLVEKMDIGKGKFWI 170
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ D + +P + C C DY LAD+ G +G P
Sbjct: 171 ETADQTL------SIPLKETHGYEQNGCKVCLDYVAELADVSTGSVGTP 213
>gi|333911656|ref|YP_004485389.1| coenzyme F420 hydrogenase subunit beta [Methanotorris igneus Kol 5]
gi|333752245|gb|AEF97324.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris igneus Kol
5]
Length = 282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 40/268 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++ ++ AR T K ++ +Q GIV+ I L+ G+++ V+ +D
Sbjct: 4 FGKYKTVVSARATDKKILKKSQDGGIVSAAFIYGLENGLLDGVIV------------ADN 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
P +A TPEEVL A G K T+ PN++ L + V ++++ G CQ++A+R
Sbjct: 52 AGEFKAVPKVATTPEEVLEAAGTKYTVCPNISVLKSAVREYALEKVGIVGTPCQIRAVRK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H + + +G C++N GL ++ + E V+ + + + V+
Sbjct: 112 LMKYPVGFRHTDSKIALTIGIFCMENFPYMGLKTIVEEHCGVKMEDVVKMDIGKGKFWVY 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
K E L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 172 TKW-----GETKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSPD--GWST--- 219
Query: 344 PQYITVRNERGKEMLS-LVKN-LLEITP 369
+ VR +G+E + +V++ LEI P
Sbjct: 220 ---VFVRTTKGEEFFNKMVEDGYLEIKP 244
>gi|282165082|ref|YP_003357467.1| coenzyme F420 hydrogenase subunit beta [Methanocella paludicola
SANAE]
gi|282157396|dbj|BAI62484.1| coenzyme F420 hydrogenase subunit beta [Methanocella paludicola
SANAE]
Length = 292
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 41/257 (15%)
Query: 115 LGVHEEL--LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++E+ L A+ K AQ G+VTT+ L+ G+++ +
Sbjct: 3 FGTYKEVMALKAKDGKIGGVAQDGGVVTTLLCYALEKGVIDGALVA-----------GKS 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQAL 229
+ P+P +A T EE++AA G K T+SP ++T+ +AA G++++ G CQ+ A+
Sbjct: 52 ETPWMPKPTIATTKEEIIAAAGTKYTISPVVSTIK--DAAREYGLEKIAVVGTPCQIYAV 109
Query: 230 RSVE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEP-ETVLHYEFMQDYKV 282
+ + H+ + +G C +N + GL ++ P E+V E + K
Sbjct: 110 QKMRLYGVGARHIPDKVAMTVGIFCTENFSYAGLRTVIEDHCKVPIESVTKMEIGKG-KF 168
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
+K +P + C+ C D T AD+ G +G P G S T
Sbjct: 169 WVKGAKD-------VSIPIKETHKYEQDGCHVCSDLTAEFADISTGSIGTPD--GWSTT- 218
Query: 343 HPQYITVRNERGKEMLS 359
R+ RGK++LS
Sbjct: 219 -----FARSTRGKDLLS 230
>gi|410722453|ref|ZP_11361740.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
gi|410596697|gb|EKQ51355.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
Length = 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T K ++ AQ GIV+ + L G+++ V + P
Sbjct: 3 LGTYKEVVAARSTDKQIQKLAQDGGIVSGLFCYALDEGLIDGAVV------------AGP 50
Query: 173 DDRL-SPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 230
D + P P++A + +E+LAA G K T SPN+ L V G+++L + CQ +R
Sbjct: 51 SDVMWKPEPMVAMSSDEILAAAGTKYTFSPNVWMLKKAVRQYGLEKLGTVAIPCQSMGIR 110
Query: 231 SVEHH------LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
++ + + + +LG C++N E L F+ + ++ + K +
Sbjct: 111 KMQSYPFGVKNVADKIALMLGIFCMENFPYESLRTFISEKAGVDFDLVEKMDIGKGKFWI 170
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ D + +P + C C DY LAD+ G +G P
Sbjct: 171 ETADQTL------SIPLKETHGYEQNGCKVCLDYVAELADVSTGSVGTP 213
>gi|15668202|ref|NP_246995.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
jannaschii DSM 2661]
gi|2494430|sp|Q60341.1|FRHB_METJA RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|1590834|gb|AAB98011.1| coenzyme F420-reducing hydrogenase, beta subunit (frhB)
[Methanocaldococcus jannaschii DSM 2661]
Length = 287
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 40/268 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D
Sbjct: 9 FGSYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV------------ADN 56
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
P +A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R
Sbjct: 57 AGEFKAVPKVATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVRAVRK 116
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVH 283
+ H+ + ++G C++N GL ++ + E V+ + + + V+
Sbjct: 117 LMKYPVGFRHVPDKIALIIGIFCMENFPYYGLKLIVEEHCGVKMEDVVKMDIGKGKFWVY 176
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
+ E L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 177 TRW-----GETKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST--- 224
Query: 344 PQYITVRNERGKEMLS-LVKN-LLEITP 369
+ +R +G+E+ + +V++ LE+ P
Sbjct: 225 ---VFIRTAKGEEIFNKMVEDGYLEVKP 249
>gi|154150019|ref|YP_001403637.1| coenzyme F420-reducing hydrogenase subunit beta [Methanoregula
boonei 6A8]
gi|153998571|gb|ABS54994.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoregula boonei 6A8]
Length = 308
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY----- 167
LG ++ + AR T + ++ AQ GIVT++ L TG+++ + + + Y
Sbjct: 5 LGKYKSCVSARSTDKEVLKYAQDGGIVTSLFGYALDTGIIDGAIVAANKEFYAKYPSKCI 64
Query: 168 ---YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVG 223
N D + P P + T E+LAA G K +SPN+ L + G+ ++ G
Sbjct: 65 QDSSNLDMIEPWRPIPAIVNTKAELLAAAGTKYNISPNIALLKEATRSFGLDKIGIVGTP 124
Query: 224 CQVQALRSVEHH------LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEF 276
CQ+QA+R + + + +G C++N + + + ++ A+ + E+V E
Sbjct: 125 CQMQAVRKAQLYPVGMRDVGASIALAVGIFCMENFPYQSILQLVEDHAAMKLESVKKMEI 184
Query: 277 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ K + G + ++P + P C+ C DY L D+ G +G P
Sbjct: 185 GKG-KFWVYGKRGQVVQLPLKVTHKYE-----QPGCHVCLDYVANLGDISTGSVGSP 235
>gi|333988462|ref|YP_004521069.1| coenzyme F420 hydrogenase subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826606|gb|AEG19268.1| coenzyme F420 hydrogenase, subunit beta [Methanobacterium sp.
SWAN-1]
Length = 294
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T K ++ AQ GIV+ + L +++ V
Sbjct: 3 LGTYKEVVTARSTDKQIQKIAQDGGIVSALFCYALDEKIIDGAVVA-----------GPG 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
+D P P +A + +E+LAA G K T SPN+ L V G++++ + CQ +R
Sbjct: 52 EDFWKPEPKVAMSSDEILAAAGTKYTFSPNVWMLKQAVRQYGLEKVGTVAIPCQTMGIRK 111
Query: 232 VEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFL-KAASSEPETVLHYEFMQDYKVHL 284
++ + +K+ +L G C++N E L F+ + A PE V + + K +
Sbjct: 112 MQSYPFGVRFLADKIALLTGIFCMENFPYESLKTFISEKAGVSPELVEKMDIGKG-KFFI 170
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
D I LP + C C DY LAD+ G +G P
Sbjct: 171 HTADDVI------ALPLKETHGYEQNGCKVCLDYVAELADVSTGSVGSP 213
>gi|423065980|ref|ZP_17054770.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
gi|406712479|gb|EKD07664.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
Length = 64
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 403 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 462
+ ++ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 2 WAAKMMGVVIERIGPKGLEYARFSIDSHYTRNYLYVKRNYPEK-LENHVPDFAKRIVAQY 60
>gi|355571436|ref|ZP_09042688.1| coenzyme F420 hydrogenase, subunit beta [Methanolinea tarda NOBI-1]
gi|354825824|gb|EHF10046.1| coenzyme F420 hydrogenase, subunit beta [Methanolinea tarda NOBI-1]
Length = 292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++ + AR T ++ AQ GIVT + L+ G+++ +
Sbjct: 5 LGKYKLCVSARSTDKAILKKAQDGGIVTQLFKFALEEGIIDGAIVA-----------GPG 53
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
D+ PRP +A T EE++ A G K +SP ++ + + G+ ++ G CQ+QA+R
Sbjct: 54 DEPWRPRPFIATTVEELMTAGGTKYNISPQVSWIKEATRSYGLDKIGIVGTPCQMQAVRK 113
Query: 232 ----------VEHHLNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDY 280
V+ + L +G C++N + + + + ++ A+ + E V E +
Sbjct: 114 GQLYPVGWRDVDDKIKL----AIGIFCMENFSYQSIRQLVEDHAAMKMEAVKKMEIGKG- 168
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
K + G + ++P + P+C+ C DY LAD+ G +G P
Sbjct: 169 KFWVYGQRGQVVQLPLKVTHKYE-----QPACHVCLDYVANLADVSTGSVGSP 216
>gi|262192428|ref|ZP_06050580.1| coenzyme F420-dependent oxidoreductase [Vibrio cholerae CT 5369-93]
gi|262031692|gb|EEY50278.1| coenzyme F420-dependent oxidoreductase [Vibrio cholerae CT 5369-93]
Length = 403
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GI++ AI +L+ G+V+ V+ +++ SD L+ +++T +EVL+A G +
Sbjct: 100 GILSQTAIYLLEQGLVDGVIHIKA---------SDEKPLLNV-ATISKTADEVLSAAGSR 149
Query: 197 PT-LSPNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEKLYVLGTNCVDNG 252
+ SP +N + +V+ ++ F G C V ALR SVE + Y+L C
Sbjct: 150 YSPASPLINLVQIVKGNPDQKFCFIGKPCDVTALRNLISVEPSIGKSIPYLLSFFCAGTP 209
Query: 253 TREGLDKFLKAASSEPETVLHYEFMQDY--KVHLKHLDGHIEEVPYFCLPANDLVDVIAP 310
+REG++ L + +P+ ++ ++F + + I+E+ Y N L I
Sbjct: 210 SREGVEAVLDRLNVKPQDIIKFDFRGNGWPGKTVATTRSSIKEMSYNDSWGNILGPTIQH 269
Query: 311 SCYSCFDYTNALADLV 326
C C D ADLV
Sbjct: 270 RCKICADGIGENADLV 285
>gi|432332065|ref|YP_007250208.1| coenzyme F420 hydrogenase, subunit beta [Methanoregula formicicum
SMSP]
gi|432138774|gb|AGB03701.1| coenzyme F420 hydrogenase, subunit beta [Methanoregula formicicum
SMSP]
Length = 308
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 26/238 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSL--------VIL 164
LG ++ ++ AR T ++ AQ GIVT++ L+ G+++ + S ++
Sbjct: 5 LGKYKSVVSARSTDKELLKHAQDGGIVTSLFAYALEEGIIDGAIVAASKEFAAKNPSKVM 64
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVG 223
N D + P P + T E+LAA G K +SPN+ L A G+ ++ G
Sbjct: 65 LDNSNFDMIEPWRPIPAIVNTKAELLAAAGTKYNISPNVALLKEATRAFGLDKIGIVGTP 124
Query: 224 CQVQALRSVEHH------LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEF 276
CQ+QA+R + + + +G C++N + + + ++ A+ + E+V E
Sbjct: 125 CQMQAVRKAQLYPIGFRDVGASIALAVGIFCMENFPYQSILQLVEDHAAMKLESVKKMEI 184
Query: 277 MQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ + V+ K G + ++P + P C+ C DY L D+ G +G P
Sbjct: 185 GKGKFWVYGKR--GQVVQLPLKVTHKYE-----QPGCHVCLDYVANLGDISTGSVGSP 235
>gi|312137255|ref|YP_004004592.1| coenzyme f420-reducing hydrogenase subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224974|gb|ADP77830.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanothermus
fervidus DSM 2088]
Length = 280
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYAR-KTKPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG + E + A+ K K ++ +Q G+V+ + I L+ G++E V +
Sbjct: 3 LGKYVEAVAAKCKDKEIQKVSQDGGVVSGLLIYALEEGIIEGAVVSKVT----------- 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
D+ P+P +A T +E+LAA G K T+ PN+ + G+++L GV CQ+ A+R
Sbjct: 52 DEPWKPQPHIATTRDEILAAAGTKYTMCPNVWMIKEATRQYGIEKLGIVGVPCQIGAVRK 111
Query: 232 VEHHLNLEKL------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
++ + + ++G C++N L+ F+ + L + + +
Sbjct: 112 MQTYPFGARFVPDKIKLIVGIYCMENFPYSSLETFVSEKMN-----LSLDIVDKMDIGKG 166
Query: 286 HLDGH-IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ ++E +P + SC C DYT LAD+ G +G P
Sbjct: 167 KFWAYTVDETA--TIPLKETHGYEQSSCKVCNDYTAELADISTGSVGTP 213
>gi|308272003|emb|CBX28611.1| hypothetical protein N47_G39350 [uncultured Desulfobacterium sp.]
Length = 374
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 44/254 (17%)
Query: 122 LYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR 179
L AR T P E A G+VT + + + + G ++ + + R
Sbjct: 90 LVARTTNPAIKERATDGGVVTALLLNLFEKGHIDGAIVTKE------------SGLFQRR 137
Query: 180 PVLARTPEEVLAAKGVK--------------PTLSPNLNTLALVEAAGVKRLLFCGVGCQ 225
P LA + EE++ + G T SP+ + + + + R+ F G CQ
Sbjct: 138 PWLAHSKEEIIGSAGFHFDASHGLQLFSELYSTYSPSFVKVGYISSKRLDRVAFVGTPCQ 197
Query: 226 VQALRSVEHHLNLEK----LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 281
V +R ++ L +E + G C N F + E + ++ + + K
Sbjct: 198 VNTIRRIQA-LGIEPANSITIIFGLFCTGNFI------FGPEQQHQLEKIGNFRWDEVNK 250
Query: 282 VHLK-HLDGHI--EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
+++K HL H+ +E+ + L D + A C+ CFDY+ ADL G +G P+
Sbjct: 251 INVKEHLMIHLRNKEIRHISLDQLDFMKRHA--CHYCFDYSAEFADLSFGGLGSPEGWTT 308
Query: 339 SMTQHPQYITVRNE 352
+T+ Q V N+
Sbjct: 309 VITRSLQGQAVLND 322
>gi|410670515|ref|YP_006922886.1| coenzyme F420 hydrogenase, beta subunit [Methanolobus psychrophilus
R15]
gi|409169643|gb|AFV23518.1| coenzyme F420 hydrogenase, beta subunit [Methanolobus psychrophilus
R15]
Length = 386
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 28/245 (11%)
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVE-AVVC 157
V + + R + ++ +G A+ P Q +VT++ L+ G+++ A+V
Sbjct: 103 VCYNQCPRTITTEEGLIGKIRHAYCAKTAIPDLKGQDGAVVTSMLAYALEEGLIDCAIVT 162
Query: 158 VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRL 217
V+S ++ P PV+A+T +EVL A G + S + +L G++ +
Sbjct: 163 VKS-----------EEEPWKPVPVIAKTYDEVLEAAGSIYSHSMTIESLMSAVKQGMRSI 211
Query: 218 LFCGVGCQVQALRSVE-------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPET 270
F G C + A+ ++ H + +G C+D + EG+ +F+++
Sbjct: 212 AFVGTSCNIDAVYKMQKSPYGFLHLFMRANILKMGLFCMDTFSYEGIKEFVQSKD----- 266
Query: 271 VLHYEFMQDYKVHLKHLDGHI-EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
+ E ++ K+ L+ EE+ F L +L + SC C D T +DL G
Sbjct: 267 -MRLEDIESMKIRKGKLELQASEELKVFGL--EELDRYRSSSCKYCTDLTAESSDLSFGG 323
Query: 330 MGVPK 334
+G PK
Sbjct: 324 VGTPK 328
>gi|20093305|ref|NP_619380.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
gi|19918663|gb|AAM07860.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
Length = 387
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 27/238 (11%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVE-AVVCVQSLVIL 164
R + ++ +G A+ P Q G+VT++ + L G+++ AVV +S
Sbjct: 110 RTITTEEGLIGSFRYAYAAKSAIPEMKGQDGGVVTSLLLYALDEGLIDCAVVTTRS---- 165
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
++ P P +A+T EE+L + G + S L L G+ + F G C
Sbjct: 166 -------KEEPWKPIPKVAKTREEILESGGSIYSHSMTLEALMSAIKQGMHSIAFVGTSC 218
Query: 225 QVQALRSVE-------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
+ A+ ++ H K+ LG C+D T EG+ L++ E V +
Sbjct: 219 NIDAVTKMQKSSYGLLHLFMRAKILKLGLFCMDTFTYEGIKAVLESYGIALENVEAMKIR 278
Query: 278 Q-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 334
+ +++ LK H+ E+ +D + + SC C D + AD+ G +G P+
Sbjct: 279 KGKFEITLKDGKEHVLEL-------SDFDEYRSSSCQFCTDLASENADISFGGVGSPE 329
>gi|52549204|gb|AAU83053.1| uncharacterized anaerobic dehydrogenase [uncultured archaeon
GZfos26D6]
Length = 396
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 79/317 (24%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
D LGV+ +++ K G Q G+VT + I ++ + +A + VQ + YN++
Sbjct: 134 DEELGVYNDIIAG---KAATGGQDGGMVTALLISGIENNLFDAALVVQR----AAGYNAE 186
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 231
V+ +L A+G K P ++ L AG +R+ G C+V+A+R
Sbjct: 187 Y--------VVGDDVAGILRARGTKYLRVPMMSKLEAALKAGKRRIAVVGTPCEVRAVRK 238
Query: 232 VEHHLNLEKLY------VLGTNCVDN--------------GTREGLDKFLKAASSEPETV 271
++ +LE+ Y +LG C ++ G LDK K S+ +
Sbjct: 239 LQQLWDLEREYPGVELTILGLFCFESFDYLALKAYTKRTFGVE--LDKAEKTQISKGKYT 296
Query: 272 LHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 331
+ E +DY ++ ++ I E C C D+ + LAD+ +G +G
Sbjct: 297 VTAE-GKDYSCDVREMESEIRE-----------------GCSFCDDFASRLADIAIGSVG 338
Query: 332 VPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAK 391
P G S + VR++ GK++L D F V + AK
Sbjct: 339 SPD--GYST------VIVRSKAGKKLL----------------DATEFTRAEVDKKEIAK 374
Query: 392 MGRGPSQPAPKFVGNLI 408
+ + + A K +G ++
Sbjct: 375 LVKFKKRNAAKNIGTIL 391
>gi|20093977|ref|NP_613824.1| coenzyme F420-reducing hydrogenase subunit beta [Methanopyrus
kandleri AV19]
gi|19886939|gb|AAM01754.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 275
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 44/290 (15%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
+G + E+ R T + E Q G T + L+ VEAV+ ++
Sbjct: 1 MGEYREVYLTRATDERIREHGQDGGTTTALLAHALEEDTVEAVIASSTV----------- 49
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRS 231
+ P PV+ P+E++ G K +SPN++ AL EA A + G CQ+ A++
Sbjct: 50 -ETWKPEPVIVTDPDELIETAGSKYAISPNVS--ALNEAIASYDSVALVGTPCQITAVKK 106
Query: 232 VEHH----LNLEKLYVL--GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHL 284
+ + N+ + L G C +N E L K L+ + E V + ++ V
Sbjct: 107 SKMYPYGLANVTERVKLTVGIFCTENFQYESLLKLLEDMGVDVENVERMDISHGEFIVRT 166
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
K+ D H + + L D +C C D+T AD+ VG +G P +
Sbjct: 167 KNGDVH-------SVSVSKLGDYANEACNYCTDFTAEDADISVGSVGAPDGWNV------ 213
Query: 345 QYITVRNERGKEML--SLVKNLLEITPTISSGDRRPFVMETVKADDNAKM 392
+ VR + G+++ ++ ++LE+ I GD P ++E + D ++
Sbjct: 214 --VLVRTKEGEKVFRSAVDADVLEV-KDIGEGD--PNLLERLARDKKERI 258
>gi|21227327|ref|NP_633249.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1]
gi|452209810|ref|YP_007489924.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
gi|20905682|gb|AAM30921.1| Coenzyme F420 hydrogenase, beta subunit [Methanosarcina mazei Go1]
gi|452099712|gb|AGF96652.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
Length = 387
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 28/243 (11%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVE-AVVCVQSLVIL 164
R + ++ +G A+ P Q G+VT++ + L G+++ AVV V S
Sbjct: 110 RTITTEEGLIGSFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAVVTVHS---- 165
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
++ P P++A+T EE+L + G + S L L G+ + F G C
Sbjct: 166 -------EEEPWKPVPIVAKTREEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSC 218
Query: 225 QVQALRSVE-------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
+ A+ ++ H K+ LG C+D EG+ L++ + V +
Sbjct: 219 NIDAVTKMQKSSYGFLHLFMRAKVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIR 278
Query: 278 Q-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-Y 335
+ ++V LK HI E+ F + + SC C D T +D+ G +G P+ Y
Sbjct: 279 KGKFEVALKDGKEHIFELSEF-------DEYRSSSCRFCTDLTAENSDISFGGVGSPRGY 331
Query: 336 TGI 338
T +
Sbjct: 332 TTV 334
>gi|126178281|ref|YP_001046246.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
[Methanoculleus marisnigri JR1]
gi|125861075|gb|ABN56264.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoculleus marisnigri JR1]
Length = 339
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG +E+++ AR PVE Q G VT I + L G+++AVV V DP
Sbjct: 78 LGPYEDIVAARAVFPVERKQSGGAVTAILVNALDEGLIDAVVTV----------TRDPWT 127
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV----KRLLFCGVGC---QVQ 227
+ P + + EE++ G + S + LA ++ A V +R+ GV C Q
Sbjct: 128 -MKPSSAVITSSEELVQHAGSR--YSWWVPLLASLKEAVVTRKYRRVAVVGVPCVARATQ 184
Query: 228 ALRSVEHHL----NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYK 281
A+R+ +H L V+G C + L K EP + H +
Sbjct: 185 AIRASDHELLRPYAKAIRLVIGLFCTETFDYAKLVEGKLQSEKKIEPWEIRHLDIK---- 240
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISM 340
LD ++++ + +P +L + + P C C D+T AD+ G +G P YT
Sbjct: 241 ---GKLDVYLQDERHISIPLAELEESVRPGCRVCNDFTAVNADVSAGAVGSPDGYT---- 293
Query: 341 TQHPQYITVRNERGK 355
+ +RN+ G+
Sbjct: 294 -----TLVIRNDIGR 303
>gi|7649026|gb|AAF65743.1|AF228526_1 F420H2 dehydrogenase subunit FpoF [Methanosarcina mazei Go1]
Length = 346
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 38/260 (14%)
Query: 117 VHEELLYARK-----TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
+ ELL RK +K G+Q G+ + I + G ++ V +
Sbjct: 72 IENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITR----------- 120
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALR 230
++ P VL + E+V +G K T P + AL EA R+ GV CQ A R
Sbjct: 121 -NENWEPEVVLLTSAEDVERTRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHAAR 177
Query: 231 SVEHHLNLEKLYVLGTNCVDNGTRE-GLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHL 287
+ ++N + + ++G C+++ + LDK + + ++ EF + + V+ K
Sbjct: 178 LIRENVNEKIVLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTK-- 235
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG + VP D+ + C DYT+ AD+ VG +G P +
Sbjct: 236 DGEVHSVPI-----KDIAKYERNPSHHCCDYTSVFADISVGSVGAP--------DGWNSV 282
Query: 348 TVRNERGKEMLSLVKNLLEI 367
+R E G++ +V++ +EI
Sbjct: 283 FIRTEIGEKYFDMVRDEMEI 302
>gi|20094236|ref|NP_614083.1| bifunctional coenzyme F420-reducing hydrogenase subunit
beta/oxidoreductase [Methanopyrus kandleri AV19]
gi|19887267|gb|AAM02013.1| Coenzyme F420-reducing hydrogenase, beta subunit fused to
oxidoreductase related to nitrite reductase
[Methanopyrus kandleri AV19]
Length = 668
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 45/246 (18%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
Q G VT +A L+ G+ +AVV V + P + PE+V
Sbjct: 115 GQDGGAVTALARYALEEGLADAVVGVTA------------GSAWKPCVTVVEDPEKVKDL 162
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK------------ 240
G K T + LA G++R+L G+ CQV L ++H + K
Sbjct: 163 AGSKYTRVGLVEALAEAADRGIERVLAIGLPCQVNGLAKIQHFEIVAKGARALRNIDGSP 222
Query: 241 -------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 293
+ +G C N EGL K L+ + E V ++ K+ ++ G +E
Sbjct: 223 AEKLPEVVATIGLFCTKNFEYEGLVKLLREKGVDIEDVERFDITSG-KLRVEISGGETKE 281
Query: 294 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 353
+ + I C C D+T LAD+ VG +G P+ G++ + +R+E
Sbjct: 282 -----YDVKEFEEAIPEGCRICNDFTARLADVSVGSVGTPE--GVTT------LLIRSET 328
Query: 354 GKEMLS 359
G+E++
Sbjct: 329 GEELVE 334
>gi|410671239|ref|YP_006923610.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus psychrophilus
R15]
gi|409170367|gb|AFV24242.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus psychrophilus
R15]
Length = 342
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 31/262 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
Q G+ +T+A +L++G V+ +V + S DD + +L PE+V
Sbjct: 92 GQDGGVTSTLAKALLESGEVDCIVGIAS------------DDGWNTELILMTKPEDVDRT 139
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 252
G K T L+ L R+ GV CQV A R + ++N + + ++G C+++
Sbjct: 140 TGTKYTYDSVLSALKE-PFEKYDRIAVIGVPCQVHAARLISENVNDKIVVIIGLLCMESF 198
Query: 253 TREGL-DKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 309
+ + +K L + + E V+ +F + + + K + H ++ A +
Sbjct: 199 YHDVMKEKILPEIMGLKAEDVVKMDFGKGQFWNYTKDGEAHSVKIAQVAPHARN------ 252
Query: 310 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 369
C+ C DYT+ AD+ VG +G P + +R + G++ ++++ +EI
Sbjct: 253 -PCHHCCDYTSYFADISVGSVGTP--------DGWNSVLIRTDVGEKYFDMIRDKVEIME 303
Query: 370 TISSGDRRPFVMETVKADDNAK 391
G + T+K D+N K
Sbjct: 304 DPKPGLDLIKKLTTMKHDNNKK 325
>gi|219853262|ref|YP_002467694.1| coenzyme F420 hydrogenase [Methanosphaerula palustris E1-9c]
gi|219547521|gb|ACL17971.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosphaerula palustris E1-9c]
Length = 341
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 37/226 (16%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLA 183
AR +EG Q G VT I + L+ G+++AVV V + + P +
Sbjct: 88 ARAAFEIEGRQSGGAVTAILVNALEEGLIDAVVTVTA-----------DQWTMLPHSTVI 136
Query: 184 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGV----KRLLFCGVGCQVQA---LRSVEHHL 236
+ E ++ G + L LA ++ A V KR+ GV C VQA +RS EH
Sbjct: 137 TSSEALITGAGSRYNWWVPL--LAALKEAVVTRKYKRIAIVGVPCVVQAVEQMRSSEH-- 192
Query: 237 NLEKLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
+L + Y ++G C ++ + L K + S EP + + +V LK D
Sbjct: 193 DLLRPYARAIRLLIGLFCTESFDYQRLMEGKLVHEFSIEPWQIRKMDVKGVLEVLLK--D 250
Query: 289 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 334
G+ +P DL D + P C++C D T ADL G +G P+
Sbjct: 251 GN-----AITIPLKDLADCVRPGCHTCNDLTGVDADLSAGSVGSPE 291
>gi|147919452|ref|YP_686808.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocella
arvoryzae MRE50]
gi|110622204|emb|CAJ37482.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
Length = 286
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Query: 150 GMVEAVVC--VQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL- 206
G+V A++C + VI D P+PV+A T EE++AA G K T+SPN+ +
Sbjct: 27 GVVTALLCYALDQGVIDGAIVAGKSDTPWLPKPVVATTKEEIIAAAGTKYTISPNMAAIK 86
Query: 207 ALVEAAGVKRLLFCGVGCQVQALRSVE------HHLNLEKLYVLGTNCVDNGTREGLDKF 260
V G+ ++ G CQ+ A R ++ H+ + +G C +N + GL
Sbjct: 87 TAVREYGLDKVALVGTPCQIYAARKMQLYPFGARHVGDKIALTIGIFCTENFSYAGLKTI 146
Query: 261 LKAASSEP-ETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYT 319
++ P E+V K+ + ++ +P + + C D T
Sbjct: 147 IEDHCKVPVESV--------KKMEIGKGKFSVKAAKDVAIPIKETHKYEQDGDHVCTDLT 198
Query: 320 NALADLVVGYMGVP 333
AD+ G +G P
Sbjct: 199 AEFADIATGSIGTP 212
>gi|325957979|ref|YP_004289445.1| coenzyme F420 hydrogenase subunit beta [Methanobacterium sp. AL-21]
gi|325329411|gb|ADZ08473.1| coenzyme F420 hydrogenase, subunit beta [Methanobacterium sp.
AL-21]
Length = 294
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T K ++ AQ GIV+ + L+ +++ V
Sbjct: 3 LGTYKEVVTARSTDKEIQKIAQDGGIVSALFCYALEEKLIDGAVVA-----------GPG 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRS 231
D P P++A+T +E+LAA G K T SPN+ L V G++++ + CQ +R
Sbjct: 52 KDFWKPEPMVAQTADEILAAAGTKYTFSPNVLMLKKAVRQYGLEKVGTVAIPCQAMGIRK 111
Query: 232 VEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFL-KAASSEPETVLHYEFMQ-DYKVH 283
++ + +K+ +L G C++N L F+ + PE V + + + VH
Sbjct: 112 MQSYPFGVRFLADKIALLTGIFCMENFPFASLQTFISEKMGVSPELVEKMDIGKGKFWVH 171
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+P + C C DY LAD+ G +G P
Sbjct: 172 TAD--------DVLSIPLKETHGYEQSGCKVCLDYVAELADVSTGSVGSP 213
>gi|148643181|ref|YP_001273694.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobrevibacter
smithii ATCC 35061]
gi|148552198|gb|ABQ87326.1| coenzyme F420-reducing hydrogenase, beta subunit, FrhB
[Methanobrevibacter smithii ATCC 35061]
Length = 285
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E + AR T + E AQ GI + + I L+ ++E V DP
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAVVA-----------GDP 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQAL 229
D P P +A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q +
Sbjct: 52 GDDWVPIPEIATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQGI 109
Query: 230 RSVEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYK 281
R ++ + +K+ +L G C++N LD F K + + V + + +
Sbjct: 110 RKMQAYPFSTRFIADKIKLLVGIFCMENFPMASLDTFTKGLMDVDLDKVTKMDIGKGKFW 169
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 341
++ + D + +P + C C DY AD+ G +G P +T
Sbjct: 170 IYTEGSD-EPQGIPIKATHGYE-----QAGCNICNDYVCEFADISTGSVGAPDGWSTVLT 223
Query: 342 QHPQYITVRNERGKEMLSLV--KNLLEITP 369
R + G ++ S L+E P
Sbjct: 224 --------RTDAGADIFSAAVDAGLIETKP 245
>gi|261350026|ref|ZP_05975443.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2374]
gi|288860812|gb|EFC93110.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2374]
Length = 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E + AR T + E AQ GI + + I L+ ++E V DP
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAVVA-----------GDP 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQAL 229
D P P +A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q +
Sbjct: 52 GDDWVPIPEIATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQGI 109
Query: 230 RSVEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFLKA 263
R ++ + +K+ +L G C++N LD F K
Sbjct: 110 RKMQAYPFSTRFIADKIKLLVGIFCMENFPMASLDTFTKG 149
>gi|222445412|ref|ZP_03607927.1| hypothetical protein METSMIALI_01048 [Methanobrevibacter smithii
DSM 2375]
gi|222434977|gb|EEE42142.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2375]
Length = 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E + AR T + E AQ GI + + I L+ ++E V DP
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAVVA-----------GDP 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQAL 229
D P P +A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q +
Sbjct: 52 GDDWVPIPEIATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQGI 109
Query: 230 RSVEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFLKA 263
R ++ + +K+ +L G C++N LD F K
Sbjct: 110 RKMQAYPFSTRFIADKIKLLVGIFCMENFPMASLDTFTKG 149
>gi|417822428|ref|ZP_12469027.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Vibrio cholerae HE48]
gi|340049528|gb|EGR10443.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Vibrio cholerae HE48]
Length = 268
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GI++ AI +L+ G+V+ V+ +++ SD L+ +++T +EVL+A G +
Sbjct: 100 GILSQTAIYLLEQGLVDGVIHIKA---------SDEKPLLN-VATISKTADEVLSAAGSR 149
Query: 197 PT-LSPNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEKLYVLGTNCVDNG 252
+ SP +N + +V+ ++ F G C V ALR SVE + Y+L C
Sbjct: 150 YSPASPLINLVQIVKGNPDQKFCFIGKPCDVTALRNLISVEPSIGKSIPYLLSFFCAGTP 209
Query: 253 TREGLDKFLKAASSEPETVLHYEF 276
+REG++ L + +P+ ++ ++F
Sbjct: 210 SREGVEAVLDRLNVKPQDIIKFDF 233
>gi|296109548|ref|YP_003616497.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[methanocaldococcus infernus ME]
gi|295434362|gb|ADG13533.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus infernus ME]
Length = 352
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 40/257 (15%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
++D YLG++ A+ ++ AQ G+V+ I I L+ +++ + ++
Sbjct: 89 EMEDKYLGIYR----AKSKLEIKNAQNGGVVSAILINALEEELIDGAIVIKQ-------- 136
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVK--PTLSPNLNTLA-LVEAAGVKRLLFCGVGCQ 225
+ L P LA T EEV+ A G K +SP LN L V ++RL G C
Sbjct: 137 ---DNWTLEPISYLATTKEEVVKAAGSKYLRKVSP-LNALKKAVMEEKLERLAIVGTPCI 192
Query: 226 VQALRSVEHHLN-----LEKLYVLGTN--CVDNGTREGLDKFLKAASSEPETVLHYEFMQ 278
++A+ ++ +N K L + C + + K L+ P + E ++
Sbjct: 193 IEAMAKIQSSVNDLLKPFRKAIRLKISLFCFEIYDYAKMLKKLEEEGINPWDIKKME-IE 251
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
K L +DG I+E +L V+ C SC D+T +D+ VG +G P+ G
Sbjct: 252 RGKFLLYLVDGFIKE-----YKIKELDPVMREGCKSCIDFTGLYSDISVGNVGTPE--GY 304
Query: 339 SMTQHPQYITVRNERGK 355
S + +RN+ G+
Sbjct: 305 ST------VIIRNKWGE 315
>gi|149718|gb|AAA72190.1| F420 hydrogenase beta-subunit (frhB) [Methanothermobacter
thermautotrophicus]
Length = 281
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V + P
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAVV------------AGP 50
Query: 173 DDRL-SPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 230
P P++A T +E+ AA G K T SPN+ L V G+++L + CQ +R
Sbjct: 51 GKEFWKPEPMVAMTSDELKAAAGTKYTFSPNVLMLKKAVRQYGIEKLGTVAIPCQTMGIR 110
Query: 231 SVEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
+ + +K+ +L G C++N L F+ L+ E ++ +
Sbjct: 111 KAQTYPFGVRFVADKIKLLVGIYCMENFPYTSLQTFICEKLG-----LNMELVEKMDIGK 165
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ ++ Y LP + C C DY LAD+ G +G P
Sbjct: 166 GKFWVYTQDDVY-TLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|304314490|ref|YP_003849637.1| F420-dependent sulfite reductase [Methanothermobacter marburgensis
str. Marburg]
gi|302587949|gb|ADL58324.1| F420-dependent sulfite reductase [Methanothermobacter marburgensis
str. Marburg]
Length = 690
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 51/252 (20%)
Query: 129 PVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEE 188
P+ G Q G+VT+ +L+ G ++ + V D+ P +L +T E+
Sbjct: 150 PIRG-QDGGVVTSFLKHLLEKGEIDGAIVVG-------------DEHWKPVSLLVQTAED 195
Query: 189 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNL--- 238
+ G K ++S L L G++R+ G+ CQ+ LR ++ H L L
Sbjct: 196 LEETSGSKYSIS-TLEALRTAGELGIERVAVVGLPCQINGLRKLQYFPYLAKHDLELGRK 254
Query: 239 -------EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 291
E Y++G C + L K L+ E + E ++ + + L+ +
Sbjct: 255 GKPVKLPEIRYLIGLFCTEKFEYGDLRKVLR------ENGIRMEDVEKFNIRRGKLEVDL 308
Query: 292 EEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 350
+ +L+D+ I+ C SC D+ LAD+ VG G P+ G S I VR
Sbjct: 309 GDR----RETLNLMDIRISEGCRSCRDFDAHLADVSVGSAGSPE--GYST------IIVR 356
Query: 351 NERGKEMLSLVK 362
RG E+ V+
Sbjct: 357 TRRGAEIAGAVE 368
>gi|224370425|ref|YP_002604589.1| putative coenzyme F420 hydrogenase subunit beta
(8-hydroxy-5-deazaflavin-reducing hydrogenase subunit
beta) (FRH) [Desulfobacterium autotrophicum HRM2]
gi|223693142|gb|ACN16425.1| putative coenzyme F420 hydrogenase, beta subunit
(8-hydroxy-5-deazaflavin-reducing hydrogenase, beta
subunit) (FRH) [Desulfobacterium autotrophicum HRM2]
Length = 369
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 108/276 (39%), Gaps = 41/276 (14%)
Query: 107 KDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEM--LKTGMVEAVVCVQSLVIL 164
K DT LG + E+ AR+ V + TT A+ M L+ G+++A V S
Sbjct: 72 KTPWPDTPLGHYREIHMARRGNKVPQGHFQNGGTTSALVMSALEQGVIDAAVLTGS---- 127
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
D L PRP L T EVL K +P + L G + L G C
Sbjct: 128 ---------DGLRPRPRLVTTALEVLDCTASKYIAAPTVACLNRATGKGYQNLGIVGTPC 178
Query: 225 QVQALRSVEHH-LNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ 278
Q+ L ++ + L+L +G C EG +L +P +V E
Sbjct: 179 QMTGLSTLRTNPLDLPDFKDVTGMTIGLFCTWALETEGFLDYLLQQGIDPASVQSMEIPP 238
Query: 279 DYKVH-LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
+ L L+ ++ LP ++ + P C C D T DL VG
Sbjct: 239 PPAENVLLTLEKEVKT-----LPLAEIRKRVLPGCAVCPDMTALFCDLSVG--------- 284
Query: 338 ISMTQHPQYIT--VRNERGKEML--SLVKNLLEITP 369
+ + P + T VR+ERG+ ++ ++ LEI P
Sbjct: 285 -AFEEDPAWNTLIVRSERGQALVDKAIETGFLEIRP 319
>gi|15679299|ref|NP_276416.1| coenzyme F420-reducing hydrogenase subunit beta
[Methanothermobacter thermautotrophicus str. Delta H]
gi|3334465|sp|P19499.4|FRHB_METTH RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|2622404|gb|AAB85777.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 281
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V + P
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAVV------------AGP 50
Query: 173 DDRL-SPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 230
P P++A T +E+ AA G K T SPN+ L V G+++L + CQ +R
Sbjct: 51 GKEFWKPEPMVAMTSDELKAAAGTKYTFSPNVLMLKKAVRQYGIEKLGTVAIPCQTMGIR 110
Query: 231 SVEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
+ + +K+ +L G C++N L F+ L+ E ++ +
Sbjct: 111 KAQTYPFGVRFVADKIKLLVGIYCMENFPYTSLQTFICEKLG-----LNMELVEKMDIGK 165
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ ++ Y LP + C C DY LAD+ G +G P
Sbjct: 166 GKFWVYTQDDVY-TLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|383320545|ref|YP_005381386.1| coenzyme F420 hydrogenase, subunit beta [Methanocella conradii
HZ254]
gi|379321915|gb|AFD00868.1| coenzyme F420 hydrogenase, subunit beta [Methanocella conradii
HZ254]
Length = 299
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 34/254 (13%)
Query: 115 LGVHEEL--LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
G ++E+ L A+ +K +Q G+VT + L G+++ +
Sbjct: 3 FGTYKEVMALKAKDSKITGVSQDGGVVTALLCYALDKGVIDGALVA-----------GKG 51
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRS 231
+ P+P +A T EE++AA G K T++P ++ + V G+++L G CQ+ A++
Sbjct: 52 ETPWLPKPTIATTKEEIMAAAGTKYTINPVVSVIKDAVREQGLEKLAVVGTPCQIYAVQK 111
Query: 232 VE------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+ H+ + +G C +N + GL ++ P + + K +K
Sbjct: 112 MRLYPVGARHIPDKIALTIGIFCTENFSYAGLRTIIEDHCKVPVDSVTKMEIGGGKFKVK 171
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 345
+ +P + C+ C D T AD+ G +G P+ T
Sbjct: 172 AAGKEV------AIPIKETHKYEQEGCHVCSDLTAEFADISTGSIGTPEGWSTVFT---- 221
Query: 346 YITVRNERGKEMLS 359
R +GK++L+
Sbjct: 222 ----RTTKGKDLLA 231
>gi|91772648|ref|YP_565340.1| nitrite and sulphite reductase [Methanococcoides burtonii DSM 6242]
gi|91711663|gb|ABE51590.1| coenzyme F420-dependent sulfite reductase [Methanococcoides
burtonii DSM 6242]
Length = 639
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 49/269 (18%)
Query: 109 SLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSY 166
SL + +G +++++ AR T P E Q G VT + G+++ V
Sbjct: 78 SLPPSLIGQYQKIVSARATDPSIAEKGQDGGAVTALLGYCFDNGLIDGAVTTAGFT---- 133
Query: 167 YYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQV 226
P + + EE+L +G K + P + L + +K + GV CQ
Sbjct: 134 ----------KPDSCIVASKEELLDTQGAKYSAVPVMAALRQSKDE-LKNVAMVGVPCQT 182
Query: 227 QALRS-----------VEHHLNLEKL------YVLGTNCVDNGTREGLDKFLKAASSEPE 269
R +E +N EK Y +G C++N E L + +K+ + +
Sbjct: 183 YGTRRTQFFTGLNVHPMEVGMNGEKADIPNIPYTIGLFCMENFNYEKLSEHMKSIGIDLD 242
Query: 270 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
+ Y D + + DG IE + D+ D + C C D + +AD+ G+
Sbjct: 243 KIRKYAIRLDVMI-VTTDDGEIE------ISLKDIADCVWDGCRICRDAVSKVADISAGH 295
Query: 330 MGVPKYTGISMTQHPQYITVRNERGKEML 358
+G TG + + RN++G E+L
Sbjct: 296 VG--SSTGWTT------LIARNDKGLELL 316
>gi|397780732|ref|YP_006545205.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
gi|396939234|emb|CCJ36489.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
Length = 339
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 37/252 (14%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG H +++ AR PVE Q G VT I + L G+++AVV V DP
Sbjct: 78 LGPHLDIVAARSVFPVERKQSGGAVTAILVNALDEGLIDAVVTV----------TRDPWT 127
Query: 175 RLSPRPVLARTPEEVLAAKGVKPT-LSPNLNTL-ALVEAAGVKRLLFCGVGC---QVQAL 229
+ P + + + ++ G + + P L +L V +R+ GV C QA+
Sbjct: 128 -MKPSSAVITSSDALIQHAGSRYSWWVPLLASLKEAVVTRKYRRIAVVGVPCVARATQAI 186
Query: 230 RSVEHHL----NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
R+ +H L V+G C E D + K + E+ E ++ +K
Sbjct: 187 RASDHELLRPYAKAIRLVIGLFCT-----ETFD-YAKLVEGKLESERRIEPWDIRRLDIK 240
Query: 286 -HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISMTQH 343
LD ++++ + +P +L + + P C C D+T AD+ G +G P+ YT
Sbjct: 241 GKLDVYLQDERHISIPLAELEESVRPGCRVCTDFTAVEADVSAGAVGSPEGYT------- 293
Query: 344 PQYITVRNERGK 355
+ +RN+ G+
Sbjct: 294 --TLVIRNDIGR 303
>gi|73668420|ref|YP_304435.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina barkeri str.
Fusaro]
gi|72395582|gb|AAZ69855.1| coenzyme F420 hydrogenase, beta subunit [Methanosarcina barkeri
str. Fusaro]
Length = 387
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 121/302 (40%), Gaps = 40/302 (13%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLG--DGMSRIEG---LETVVHGRGRRKDSLDDTYLGVHE 119
C+ CG C +C ++ DG ++ G V + + R + ++ +G
Sbjct: 72 CTLCGACAA--------SCEYITIEDGTPKLVGPCKACGVCYYQCPRTITTEEGLIGSFR 123
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVE-AVVCVQSLVILSYYYNSDPDDRLSP 178
AR P Q G+VT++ + L G+++ AVV +S ++ P
Sbjct: 124 FAYAARSAIPEIKGQDGGVVTSLLLYALDEGLIDSAVVTTRS-----------KEEPWKP 172
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----- 233
PV+A+ EE+L + G + S L L G+ + F G C + A+ ++
Sbjct: 173 VPVVAKKREEILESSGSIYSHSMTLEALMSAIKQGMNSVAFVGTSCNIDAVTKMQKSSYG 232
Query: 234 --HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-YKVHLKHLDGH 290
H K+ LG C+D + EG+ L + E V + + ++V LK
Sbjct: 233 FLHLFMRAKVLKLGLFCMDTFSYEGIKAVLGSYGITLENVDAMKIRKGRFEVTLKDGKQQ 292
Query: 291 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 350
I ++ F + + SC C D T +D+ G +G P+ +T+ +
Sbjct: 293 IFDLSEF-------DEYRSSSCRFCTDLTAENSDISFGGVGSPRGWTTVLTRSALGYEIF 345
Query: 351 NE 352
NE
Sbjct: 346 NE 347
>gi|52549133|gb|AAU82982.1| coenzyme F420-reducing hydrogenase subunit beta [uncultured
archaeon GZfos24D9]
Length = 374
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 36/260 (13%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V
Sbjct: 81 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVV------ 131
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVG 223
S + P +A E++LAA G K T P+++ + G K + G+
Sbjct: 132 ------SKTSEDWIAEPFVATKKEDILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLP 185
Query: 224 CQVQALRSVE----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ 278
C +Q +R V+ + +K+ +L G C + L L + E V + +
Sbjct: 186 CHIQGMRKVQLSKGFDVGADKVKLLIGLLCSETFDMPMLKNKLLELGTRIEDVEKFNIKK 245
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
+ ++ P ++ D + +C C+D+ AD+ VG +G G
Sbjct: 246 GSFIVYTKAGKELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGW 297
Query: 339 SMTQHPQYITVRNERGKEML 358
S + R++ GKE++
Sbjct: 298 ST------VITRSDAGKELV 311
>gi|52550015|gb|AAU83864.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured
archaeon GZfos34H10]
Length = 371
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 38/261 (14%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V
Sbjct: 78 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVV------ 128
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVG 223
S + P +A ++LAA G K T P+++ + G K + G+
Sbjct: 129 ------SKTSEDWIAEPFVATKKADILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLP 182
Query: 224 CQVQALRSVEHHLNLE------KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
C +Q +R V+ + KL ++G C + L L ++ E V+ +
Sbjct: 183 CHIQGMRKVQLSKGFDVGADNVKL-LIGLLCSETFDMPMLKNKLLELGTQIEDVVKFNIK 241
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
+ + ++ P ++ D + +C C+D+ AD+ VG +G G
Sbjct: 242 KGSFIVYTKAGKELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FG 293
Query: 338 ISMTQHPQYITVRNERGKEML 358
S + R++ GKE++
Sbjct: 294 WST------VITRSDAGKELV 308
>gi|304315420|ref|YP_003850567.1| F420-reducing hydrogenase, subunit beta [Methanothermobacter
marburgensis str. Marburg]
gi|302588879|gb|ADL59254.1| F420-reducing hydrogenase, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 281
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V + P
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAVV------------AGP 50
Query: 173 DDRL-SPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 230
+ P+P++A + +E+ AA G K T SPN+ L V G+++L + CQ +R
Sbjct: 51 GEEFWKPQPMVAMSSDELKAAAGTKYTFSPNVMMLKKAVRQYGIEKLGTVAIPCQTMGIR 110
Query: 231 SVEHH-----LNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 284
++ + +K+ +L G C++N L F+ + E ++ +
Sbjct: 111 KMQTYPFGVRFLADKIKLLVGIYCMENFPYTSLQTFICEKLG-----VSMELVEKMDIGK 165
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ ++ LP + C C DY LAD+ G +G P
Sbjct: 166 GKFWVYTQD-DVLTLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|268323352|emb|CBH36940.1| hypothetical protein, Coenzyme F420 hydrogenase/dehydrogenase, beta
subunit family [uncultured archaeon]
Length = 467
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 79/317 (24%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
D LGV+ +++ ++ Q G+VT + I ++ + +A + VQ YN++
Sbjct: 205 DEELGVYNDIIAGMTSRD---GQDGGMVTALLIAGIENNIFDAALVVQR----EAGYNAE 257
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 231
V+ +L+A+G K P ++ L AG +R+ G C+V+A+R
Sbjct: 258 Y--------VVVDDVAGILSARGTKYLRVPMMSKLEAALKAGKRRIAVVGTPCEVRAVRK 309
Query: 232 VEHHLNLEKLY------VLGTNCVDN--------------GTREGLDKFLKAASSEPETV 271
++ +LE+ Y +LG C ++ G LDK K S+ + +
Sbjct: 310 LQQLWDLEREYPGVELTILGLFCFESFDYLALKAYTKRTFGVE--LDKAEKTQISKGKYI 367
Query: 272 LHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 331
+ E +DY ++ ++ I E C C D+ + LAD+ +G +G
Sbjct: 368 VS-EGGKDYSCDVRQMEAEIRE-----------------GCAFCDDFASRLADIAIGSVG 409
Query: 332 VPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAK 391
+ + VR++ GK++L D F V + AK
Sbjct: 410 --------SSDGYSTVIVRSKAGKKLL----------------DAAEFTRAEVDKKEIAK 445
Query: 392 MGRGPSQPAPKFVGNLI 408
+ + + A K +G ++
Sbjct: 446 LVKFKKRNADKNIGTVL 462
>gi|158521163|ref|YP_001529033.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Desulfococcus
oleovorans Hxd3]
gi|158509989|gb|ABW66956.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfococcus oleovorans Hxd3]
Length = 364
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 45/262 (17%)
Query: 120 ELLYARKTKPVEGAQWT--GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
EL AR PV + T G VT + + + TG ++ + + +DP S
Sbjct: 86 ELTAARALDPVVRKKATDGGAVTAVLLHLFDTGRIDGAIVTR---------RTDP---FS 133
Query: 178 PRPVLARTPEEVLAAKGV--------------KPTLSPNLNTLALVEAAGVKRLLFCGVG 223
P LA T +E++A+ G T SP++ V G+ R+ G
Sbjct: 134 REPHLATTRDEIIASAGFFMDTSHGMKHFGHDYSTYSPSVQEFRPVLEKGLSRIALVGTP 193
Query: 224 CQVQALRSVEHHLNL----EKLYVLGTNCVDN--GTREGLDKFLKAASSEPETVLHYEFM 277
CQ++A+R +E L + + LG C N T + D+ + + V
Sbjct: 194 CQIEAVRKIE-VLGIVPSDSIKFCLGLFCSGNFSFTDKEKDQMEAVGGFQWDAVTRINIK 252
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYT 336
++ V+L +G + +P D VD + +C+ C DY AD+ G +G
Sbjct: 253 DNFMVYLS--NGKVLSIPL------DKVDFMKRFACHFCMDYAAEYADISFGGIGAKDGW 304
Query: 337 GISMTQHP-QYITVRNERGKEM 357
+T+ P + + RGK +
Sbjct: 305 TTVITRTPLGRAVMADARGKTL 326
>gi|52548669|gb|AAU82518.1| coenzyme F420-reducing hydrogenase subunit beta [uncultured
archaeon GZfos18B6]
Length = 374
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 36/260 (13%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V
Sbjct: 81 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVV------ 131
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVG 223
S + P +A ++LAA G K T P+++ + G K + G+
Sbjct: 132 ------SKTSEDWIAEPFVATKKADILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLP 185
Query: 224 CQVQALRSVE----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ 278
C +Q +R V+ + +K+ +L G C + L L ++ E V + +
Sbjct: 186 CHIQGMRKVQLSKGFDVGADKVKLLIGLLCSETFDMPMLKNKLLELGTQIEDVEKFNIKK 245
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
+ ++ P ++ D + +C C+D+ AD+ VG +G G
Sbjct: 246 GSFIVYTKAGKELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGW 297
Query: 339 SMTQHPQYITVRNERGKEML 358
S + R++ GKE++
Sbjct: 298 ST------VITRSDAGKELV 311
>gi|432330628|ref|YP_007248771.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoregula
formicicum SMSP]
gi|432137337|gb|AGB02264.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoregula
formicicum SMSP]
Length = 340
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG + ELL AR V AQ G VT I G+++AVV V +D
Sbjct: 78 LGTYLELLSARSASEVPYAQSGGAVTAILAHAFDAGLIDAVVTVS-------------ED 124
Query: 175 R--LSPRPVLARTPEEVLAAKGVKPT-LSPNLNTL--ALVEAAGVKRLLFCGVGCQVQAL 229
R L P + E +++ G + + P L L A+VE +R+ GV C VQAL
Sbjct: 125 RFTLKPSSAIITKSEALISVAGSRYSWWVPLLAALKTAVVEKK-YRRIAVVGVPCAVQAL 183
Query: 230 RSVEHHLN-LEKLY------VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 282
+ N L + Y V+G C ++ L ++ E + K+
Sbjct: 184 GKIRTSDNDLLRPYAKAIRLVIGLFCTESFDYSSLIHTQLQVRNKIEPFQIKKLDVKGKL 243
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
++ DG +P LP +L I C+SC D+T AD+ G +G P MT
Sbjct: 244 TIEKTDGSSTSIP---LP--ELEACIRKGCHSCTDFTALDADISAGSVGSPA----GMTT 294
Query: 343 HPQYITVRNERGKEML 358
+RN GK +
Sbjct: 295 ----FLIRNTTGKAFV 306
>gi|91774281|ref|YP_566973.1| F420H2 dehydrogenase subunit F [Methanococcoides burtonii DSM 6242]
gi|91713296|gb|ABE53223.1| F420H2 dehydrogenase subunit F [Methanococcoides burtonii DSM 6242]
Length = 343
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 59/327 (18%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRI---EGLETVVHGRG----------RRKDS 109
D C+ CG C ++ +GD + I + LE HG R
Sbjct: 13 DVCTACGAC----VSACPAGAITMGDKKAEIRDPDSLELYTHGAAPNVCEGCLTCSRICP 68
Query: 110 LDDTYLGVHEELLYARK---TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSY 166
+ D Y +E R K Q G+ + IA +L+ G ++ VV +
Sbjct: 69 VVDGYF--EDEFANVRSFLAAKSNIAGQDGGVTSAIARSLLRQGEIDCVVGITR------ 120
Query: 167 YYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQV 226
+++ L + E+V AKG K T L+ L + +++ GV CQ
Sbjct: 121 ------NEKWETELELFTSAEDVEKAKGTKYTYDSVLSVLR-DPFSKYEKIAVIGVPCQA 173
Query: 227 QALRSVEHHLNLEKLYVLGTNCVDNGTREGL-DKFL-KAASSEPETVLHYEFMQDYKVHL 284
R + ++N + + ++G C+++ +E + DK + + + E V+ +F + K
Sbjct: 174 HGARLISENVNDKIVLIIGLLCMESFHQEVMTDKIIPEIMGVKAEDVVKMDFGKG-KFWA 232
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPS----CYSCFDYTNALADLVVGYMGVPKYTGISM 340
DG VP + +AP C+ C DYT+ AD+ VG +G P
Sbjct: 233 YTKDGEEHSVP---------IAKVAPHARNPCHHCNDYTSVFADIAVGSVGTP------- 276
Query: 341 TQHPQYITVRNERGKEMLSLVKNLLEI 367
+ +R + G++ +V++ LE
Sbjct: 277 -DGWNSVLIRTDAGEKYFKMVESELEF 302
>gi|253578782|ref|ZP_04856053.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849725|gb|EES77684.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 395
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 129/319 (40%), Gaps = 45/319 (14%)
Query: 64 HCSRCGLCDTYYIAHVK--DACAFLGDGMSRIEGLET------VVHGRGRRKDSLDDTYL 115
+C+ CGLC + +K D F + + E LE V + +G++K D +
Sbjct: 11 YCTGCGLCHSVQGTELKMIDG-GFPNVDVKKGESLEFYHSVCPVFYYKGKQKH---DIWG 66
Query: 116 GVHEELL-YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
+ + L+ Y+ K A G +T I +L+ V+A++ + DPDD
Sbjct: 67 NIEKALIGYSSNKKIRFKAASGGALTEICCYLLENKKVDAII----------HTTYDPDD 116
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRLLFCGVGCQVQALR--- 230
+ ++ T EEV++ G + +S P + L +V++ K+ F G C V ALR
Sbjct: 117 QTKTISCVSTTVEEVISRCGSRYGISVPLKDILQIVQSD--KKYAFVGKPCDVMALRRYL 174
Query: 231 SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPE---TVLHYEFMQDYKVHLKHL 287
+ L +Y+L C + D+ LK + + T+++ +
Sbjct: 175 NKNEKLTKNIIYLLSFFCAGEPSVNAQDELLKKMGTSRQGCDTLVYRGNGWPGFTTVNTK 234
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY- 346
DG ++ Y L I C C D T LAD+V + + HP +
Sbjct: 235 DGRELKMEYKVAWGQYLGRDIRYICRFCMDGTGELADIVCA-----DFWQLDNNNHPDFS 289
Query: 347 -------ITVRNERGKEML 358
I RNE GK++L
Sbjct: 290 EHEGRNIIIARNELGKQLL 308
>gi|359409454|ref|ZP_09201922.1| coenzyme F420-reducing hydrogenase, beta subunit [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356676207|gb|EHI48560.1| coenzyme F420-reducing hydrogenase, beta subunit [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 415
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 95/245 (38%), Gaps = 19/245 (7%)
Query: 92 RIEGLETVVHGRGRRKDSLDDTYLGVHE-ELLYARKTKPVEGAQWTGIVTTIAIEMLKTG 150
R+EGL V G+ D + HE L YA A GI+T +A +L
Sbjct: 64 RLEGLPLEV---GKMAPYHDKVWGPYHEMSLAYAHNKAVRHQASTAGILTALACYLLDAD 120
Query: 151 MVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVE 210
MV+A++ V++ S N L+RT ++VLAA G + + L + +
Sbjct: 121 MVDAIIHVRAADGTSAPANFGV-------ATLSRTAKQVLAASGSRYGPTAALIDIDRIL 173
Query: 211 AAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKFLKAASSE 267
++G +R C + ALR++ HH +N LY L C E FL S
Sbjct: 174 SSG-ERFAIVAKPCDLNALRNLAHHDERVNKHILYWLTLLCGGFQPNEAFRSFLSEQSLS 232
Query: 268 PE---TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP-SCYSCFDYTNALA 323
E V + F + + DGH Y D P C C D A
Sbjct: 233 EEGLNAVRYRGFGCPGPTSITYKDGHEASFHYLDFWGEDESQWAMPLRCKICPDGIGEAA 292
Query: 324 DLVVG 328
D+V G
Sbjct: 293 DIVAG 297
>gi|21227071|ref|NP_632993.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1]
gi|452209557|ref|YP_007489671.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
gi|20905396|gb|AAM30665.1| Coenzyme F420 hydrogenase beta subunit [Methanosarcina mazei Go1]
gi|452099459|gb|AGF96399.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
Length = 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 31/240 (12%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILS 165
R D + LG + ++ + + Q G VT I L TG+V+AVV V
Sbjct: 74 RLDEQPSSLLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLVDAVVTV------- 126
Query: 166 YYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR---LLFCGV 222
DP L PR ++ E ++ G + L + +L EA K+ + GV
Sbjct: 127 ---TEDPW-TLKPRSMVITRSEALIGQAGSRYNWWVPLVS-SLKEAVINKKYRNIAVVGV 181
Query: 223 GCQVQALRSV---EHHL----NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLH 273
C +QA+R + +H L +VLG C +N E L K + EP V
Sbjct: 182 PCVIQAVRKMLESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVCR 241
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ ++ L DG + +P +L D + P C C D+T +D+ G +G P
Sbjct: 242 IDVKGKLEITLN--DGT-----QYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSP 294
>gi|333910912|ref|YP_004484645.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333751501|gb|AEF96580.1| Coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
Length = 366
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLV 162
R K + +G + E+ A+ ++ AQ G VT I L G+++ + V
Sbjct: 94 RTEEKLEIPIEEIGKYIEIFGAKSKMDIKYAQSGGAVTAILCNALDEGLIDGAIVV---- 149
Query: 163 ILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRL---L 218
S+ + P+ VLA T EE++ A G + + P L AL EA V++L
Sbjct: 150 -------SEDKWTMEPKSVLATTKEELIKAAGSRYNWNVPILE--ALKEAVMVRKLEKLA 200
Query: 219 FCGVGCQVQA-----------LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSE 267
G C + A LR + + L+ +G C + L +K
Sbjct: 201 IVGTPCVINAVFQILASDNDLLRPFKKAIRLK----IGLFCTETFKYSELMAKIKEMGIN 256
Query: 268 PETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 327
P + E ++ K+ + L+G +E+P ++ + C C D+T ++D+
Sbjct: 257 PWEIKKME-IKKGKLAIDLLNGETKEIPL-----KEIEYCVRKGCSVCRDFTALVSDISA 310
Query: 328 GYMGVPKYTGISMTQHPQYITVRNERGK 355
G +G P+ G++ + VRNE GK
Sbjct: 311 GNVGTPE--GVTT------LIVRNEWGK 330
>gi|397630808|gb|EJK69921.1| hypothetical protein THAOC_08779, partial [Thalassiosira
oceanica]
Length = 66
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Query: 48 KRSKPIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDAC 83
+ S+PI P G +PAKDHCSRCGLC+T Y+++V DAC
Sbjct: 28 RPSRPINPDGWPEKFPAKDHCSRCGLCETSYVSNVLDAC 66
>gi|52549383|gb|AAU83232.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured
archaeon GZfos27A8]
Length = 642
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 54/280 (19%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
LG +E L+ AR T P +E Q G VT + + G+++ V+
Sbjct: 85 LGQYETLVAARATDPAVLEAGQDGGAVTALLSYCMDNGLIDGVIAT-------------- 130
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 232
D P + R+ EE+L + G K + P L+ A+ +A + G+ C V +R
Sbjct: 131 GDAGKPSSRVVRSKEELLDSAGSKYSAIPVLS--AIKDAGDITNAAVVGLPCHVYGVRKT 188
Query: 233 E-------HHL----NLEKL------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYE 275
+ H N EK+ YV+G C +N + L KF++ E +
Sbjct: 189 QFFPGMMSHGFEVGENGEKIKVPNIAYVIGLFCTENFNYDKLAKFMQ------EKGVDLS 242
Query: 276 FMQDYKVHLKHLDGHIEEVPYFCLPANDL--VDVIAPSCYSCFDYTNALADLVVGYMGVP 333
++ +HL L + + NDL + C C D + L+D+ G+MG
Sbjct: 243 EVRRAAIHLDELVVTTDSGEHG-FDLNDLWHAGCVQDGCVICRDAVSKLSDISAGFMGSG 301
Query: 334 KYTGISMTQHPQYITVRNERGKEMLSLVK--NLLEITPTI 371
K M R ++G E++ + +E P I
Sbjct: 302 KGWTTLMG--------RTQKGVELIKAAEEAGYIETNPDI 333
>gi|435850524|ref|YP_007312110.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661154|gb|AGB48580.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 340
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 33/241 (13%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ------ 159
R D LG + ++ A+ PV G Q G VT I + L+ GM++AVV V+
Sbjct: 68 RLDPAPTEVLGQYLDIFSAKADIPVPGKQSGGAVTAILVNALEQGMIDAVVTVEEDPWTL 127
Query: 160 ---SLVILS--YYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV 214
S VI S N P+++ E V+ K K V
Sbjct: 128 KPSSTVITSEDVLINQAGSRYNWWVPLVSSLKEAVITRKYRK-----VAVVGVPCVVQAV 182
Query: 215 KRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVL 272
+++L LR + L V+G C + E L +K ++ S EP ++
Sbjct: 183 RKML----DSDHDLLRPFRRSIRL----VVGLFCTETFDYEKLVEEKLIRERSIEPLDMI 234
Query: 273 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 332
++ ++ +K DG + +P D+ D + P C C D+T +DL G +G
Sbjct: 235 RFDVKGKLEITMK--DGSLTMIPL-----KDVDDCVRPGCRVCTDFTAIYSDLSAGSVGS 287
Query: 333 P 333
P
Sbjct: 288 P 288
>gi|294496160|ref|YP_003542653.1| F420H2 dehydrogenase subunit F [Methanohalophilus mahii DSM 5219]
gi|292667159|gb|ADE37008.1| F420H2 dehydrogenase subunit F [Methanohalophilus mahii DSM 5219]
Length = 342
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 32/265 (12%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEV 189
+EG Q G T IA ++L+ G V+ V + +D+ + E++
Sbjct: 90 IEG-QDGGATTAIASKLLELGEVDCFVGITR------------NDKWETELEVFTDSEQI 136
Query: 190 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 249
AKG K T L+ L ++ GV CQ R + ++N + + ++G C+
Sbjct: 137 KRAKGTKYTYDSVLSALR-DPFEKYDKIGVIGVPCQAHGARLISENVNDKIVVIIGLLCM 195
Query: 250 DNGTREGL-DKFLKAASS-EPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVD 306
++ + + +K +K PE V+ ++F + + + K + H ++P A +
Sbjct: 196 ESFYHDVMSEKIIKEIMGLNPEDVVKFDFAKGKFWAYTKDGESHSVKIPEVGPHARN--- 252
Query: 307 VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLE 366
C+ C DYT+ AD+ +G +G P + +R + G++ + ++ LE
Sbjct: 253 ----PCHHCCDYTSVSADISIGSVGAP--------DGWNSVLIRTDEGEKYFKMAEDELE 300
Query: 367 ITPTISSGDRRPFVMETVKADDNAK 391
I G + T+K ++N++
Sbjct: 301 IMDDPKPGMDLVKKLATMKHNNNSQ 325
>gi|15678369|ref|NP_275484.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621398|gb|AAB84847.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 406
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 111 DDTYLGVHEE--LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
DD +G +EE + ++R + GA G+++ I I +L+ G+++ + +
Sbjct: 75 DDMLMGNYEECYIAHSRDDELRYGASSGGMISQILIYLLEEGLIDGALVTRM-------- 126
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP-NLNTLALVEAAGVKRLLFCGVGCQVQ 227
+P+ L P P +ARTP E++ ++G K P N+ ++E G R G+ C +
Sbjct: 127 --NPERPLEPEPFIARTPSEIIESRGSKYCPVPANVALKEILEVPG--RYAVVGLPCHIH 182
Query: 228 ALRSVE---HHLNLEKLYVLGTNC 248
+R E L +Y LG C
Sbjct: 183 GVRKAEVISRKLRERIVYHLGIVC 206
>gi|254443100|ref|ZP_05056576.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
gi|198257408|gb|EDY81716.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GIVT +L+T VE +LV S + N + + RLS +ART EE+ A+ K
Sbjct: 43 GIVTATLCYLLETEQVEG-----ALVCSSDFANGEFNFRLS----IARTREELFEAQSSK 93
Query: 197 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL--RSVEHHLNLEKL-YVLGTNCVDNGT 253
P L L LV+A K + G+ Q+ +L R ++ L EK+ + + C N
Sbjct: 94 YFDIPVLKGLDLVKAFEGK-VAVVGLPSQINSLTRRMSKNKLLREKIGFRIALFCGHNSK 152
Query: 254 REGLDKFLKAASSEPETVLHYEFMQDY---KVHLKHLDGHIEEVPYFCLPANDLVDVIA- 309
+E +++ + +P+ + + + Q + ++ L DG ++ P+ + +++
Sbjct: 153 KELIERVWEKKGIDPKKIDRFRYRQGHWRGQMELTMKDGSVQRFPFQDFSHYQNLHILSL 212
Query: 310 PSCYSCFDYTNALADLVVG 328
C +C D+ +DL G
Sbjct: 213 DRCLNCHDHMGYYSDLSTG 231
>gi|452211541|ref|YP_007491655.1| Coenzyme F420 hydrogenase beta subunit (FrcB) [Methanosarcina mazei
Tuc01]
gi|452101443|gb|AGF98383.1| Coenzyme F420 hydrogenase beta subunit (FrcB) [Methanosarcina mazei
Tuc01]
Length = 133
Score = 51.6 bits (122), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYY 167
++D YLG + + AR T + ++ +Q GI TT+ + L+ G+++ +
Sbjct: 2 IEDPYLGKYTACVSARSTDREILKKSQDGGIATTLMVYALEQGIIDGAIVT--------- 52
Query: 168 YNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQV 226
D P+P +A + E++L A+G +SP ++ L + G+ R+ GV CQ+
Sbjct: 53 --GKGDRPWEPKPFVAMSREDILKARGTIYNISPQISWLKEATRSYGLDRVGVTGVCCQM 110
Query: 227 QALRSVE 233
QA+R +
Sbjct: 111 QAVRKAQ 117
>gi|451946109|ref|YP_007466704.1| coenzyme F420-reducing hydrogenase, beta subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451905457|gb|AGF77051.1| coenzyme F420-reducing hydrogenase, beta subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 461
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 144/367 (39%), Gaps = 51/367 (13%)
Query: 59 YPAKDH--CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLG 116
YP D C+ CG C ++ C G E L G S D ++ G
Sbjct: 58 YPVLDETTCTACGKC--------REVCP---GGQVNFEKLSQQSFG-----ISDDFSFDG 101
Query: 117 VHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
EE+L +A + +E A GI+T +AI +L++G V+ V + D
Sbjct: 102 HCEEILVGHALDSSILEKATGGGIITALAIMLLESGEVDGCVVTRMRT----------DK 151
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV-- 232
P +A + EE+L + G + T+ P TL + K + G+ C LR+
Sbjct: 152 PWMGEPFIATSREEILTSAGSRYTVIPLNKTLHTIRQQEGKYAIV-GLPCHNHGLRNAMA 210
Query: 233 -EHHLNLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFM------QDYKVH 283
+ L ++GT C GT E + + L+ + +++ ++EF Q V
Sbjct: 211 QDEVLAARIKVIIGTFC--GGTLEPVVVPELLRTKNIPLDSITNFEFRGGAWPGQMRAVF 268
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPS-CYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
+ Y N L+ + P C C+D +N AD+ VG +G
Sbjct: 269 KDKPPQAVHYSNYKDGAYNYLIGIYLPRRCQVCYDGSNLFADIAVGDAWTRDESGKYKYN 328
Query: 343 HPQYITVRNERGKEML--SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQ-- 398
+ VR++ GK ++ ++ + +L++ + M T + NA + Q
Sbjct: 329 SQSRVFVRSDLGKRIIKKAVEREVLKLNDVTQDPSYKTHRMRTQRKGLNAPLRHARWQKK 388
Query: 399 --PAPKF 403
P P++
Sbjct: 389 GIPVPQY 395
>gi|337287125|ref|YP_004626598.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Thermodesulfatator indicus
DSM 15286]
gi|335359953|gb|AEH45634.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thermodesulfatator indicus DSM 15286]
Length = 367
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 52/223 (23%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPR---PVLARTPEEVLAAK 193
G+VT + + + K GM++ V + R+SP P L + EEV+ A
Sbjct: 105 GVVTALLVHLFKRGMIDGAVVAK---------------RISPFKVVPSLVTSAEEVIEAA 149
Query: 194 GVK--------------PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH--LN 237
G T +P+ + +KR+ G CQ+ LR ++
Sbjct: 150 GFYHDVSAGVQDWSEKYSTFAPSFEEMRPAMVEKLKRVAIVGTPCQIHTLRKMQFFKVAP 209
Query: 238 LEKLY-VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL------DGH 290
E Y +LG C G F +A + E + +++ K+++K +G
Sbjct: 210 SETFYMLLGLFC------SGHFNFDEAGRKKLEEIGGFKWDDIAKINIKDALIITLQNGE 263
Query: 291 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
++ +P +++ D+ P+C C DY AD+ G +G P
Sbjct: 264 VKRIPL-----DEVEDLKRPACKFCEDYAAEFADISFGGIGAP 301
>gi|289192762|ref|YP_003458703.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
gi|288939212|gb|ADC69967.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
Length = 619
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 57/273 (20%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
EE Y + +EG Q G+VT +L+ G ++ + V D+
Sbjct: 71 KEEYYYGKSD--IEG-QDGGVVTAFLKYLLENGKIDGAIVV-------------GDECWK 114
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 237
P ++ + E++L A K +S L+ L G++++ G+ CQ+ LR +++
Sbjct: 115 PVSLVVQNAEDLLKAAKSKYAIS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPY 173
Query: 238 LEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
L K Y++G C + + + + L + E V ++ +
Sbjct: 174 LAKHDGELGKNGKPAKLPKIEYLIGLFCTEKFRYDNMKEVLAKHGIDIEKVDKFDIKKGK 233
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
L +++G +E+ DL + I P C C D+ LAD+ VG +G P G S
Sbjct: 234 --LLVYINGEKKEI--------DLKEFEICPGCKMCRDFDAELADVSVGCVGSP--DGYS 281
Query: 340 MTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 372
+ +R E+G+E +KN +E+ +
Sbjct: 282 T------VIIRTEKGEE----IKNAVELKEGVD 304
>gi|435851521|ref|YP_007313107.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662151|gb|AGB49577.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLET---VVHGRGR 105
R+ I PG C+ CG C A + D+ + L +G ++ G T V + +
Sbjct: 63 RNDIIKPG-------ICTMCGAC-----ASICDSIS-LEEGQPKLTGKCTACGVCYNQCP 109
Query: 106 RKDSLDDTYLGVHEELLYARKT-KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVIL 164
R + ++ +G + A+ K ++G Q G+VT + L+ G+++ + S
Sbjct: 110 RTITTEEGLIGCLRQAYAAKSNLKEIKG-QDGGVVTAMLAYGLEEGLIDCAIVTAS---- 164
Query: 165 SYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 224
SD ++ P P++ART E++L + G + S ++ L G+ + F G C
Sbjct: 165 -----SD-EEPWKPVPIVARTYEDLLQSSGSIYSHSMTMDALMSAIRQGMNSIAFVGPSC 218
Query: 225 QVQAL-------RSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
+ A+ R H +++ LG C+D+ GL +F++ + +H +
Sbjct: 219 NIDAVHKMQRSSRGFLHMFMRARIFKLGLFCMDSFDYGGLKQFIEGKN------MHLGDI 272
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDV---IAPSCYSCFDYTNALADLVVGYMGVP 333
+ K+ G E DL ++ + SC C D D+ G +G P
Sbjct: 273 EAMKIR----KGKFEVTTAAGQENFDLQELDNYRSSSCKYCTDMAAENTDISFGGVGTP 327
>gi|332880884|ref|ZP_08448554.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357044756|ref|ZP_09106403.1| 4Fe-4S binding domain protein [Paraprevotella clara YIT 11840]
gi|332681058|gb|EGJ53985.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355532201|gb|EHH01587.1| 4Fe-4S binding domain protein [Paraprevotella clara YIT 11840]
Length = 419
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 27/233 (11%)
Query: 113 TYLG--VHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNS 170
TY+G +E+L Y T G+VT +L+ +++ V V Y
Sbjct: 90 TYVGHSTNEDLRYHAAT--------GGMVTQFLTYLLEKKLIDGAVVVG-------YSEE 134
Query: 171 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
+P +P +A+ EE+ +K K ++ + + +KRL G+ C +Q +R
Sbjct: 135 NP---FEAKPFIAKNAEEIHDSKSSKYVVTSMDKVVTEILNTDLKRLAMVGLPCHIQGMR 191
Query: 231 SV--EHHLNLEKLYVLGT-NCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV-HLKH 286
+ ++ L +K+ V C N TR LD +L V + F D + +K
Sbjct: 192 KLAEKNRLIHDKIAVFAAIYCSVNKTRHSLDYYLYRYKVNKNDVGKFSFRDDGCMGFMKF 251
Query: 287 LDGH---IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 336
D + I++VPY C C D LAD+ G + + Y+
Sbjct: 252 TDKNGNTIKKVPYMSYWFGTHSFFANSRCSLCIDQLGELADISFGDIHIKPYS 304
>gi|297619953|ref|YP_003708058.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanococcus voltae A3]
gi|297378930|gb|ADI37085.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus voltae A3]
Length = 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
++ +G + E+ A+ K + Q G+VT + E +++ ++V+L +
Sbjct: 96 ESSIGEYIEIKTAKAIKSNDSVQSGGVVTALLAEAFDEDLIDG-----AIVMLEDKWT-- 148
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAA---GVKRLLFCGVGCQVQ 227
+ P LA + EEVL + G + S N+ L AL EA +KRL G C ++
Sbjct: 149 ----MEPESFLATSKEEVLKSSGSR--YSWNVPILEALREAVYDKKLKRLAIVGTPCVME 202
Query: 228 ALRSVEHHLN-----LEKL--YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
++ S+ + N EK + +G C + L + LK P + E +
Sbjct: 203 SINSIVNSNNDLLKPFEKAIRFKIGLFCYETMKYGPLIEMLKKEGINPWDIKKMEIGKGK 262
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
+ + +G+I+ +L ++ C C D+T +DL VG +G P+ G+S
Sbjct: 263 FIVILD-NGNIKS-----YKIKELEQIVRTGCKYCKDFTGYPSDLSVGNVGSPE--GVST 314
Query: 341 TQHPQYITVRNERGKEML--SLVKNLLEITPTISSGD 375
I +RN GK + +++ +E+ + + D
Sbjct: 315 ------IIIRNNWGKGLFDKAIINRYIEVKDPVKTED 345
>gi|336476291|ref|YP_004615432.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929672|gb|AEH60213.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 47/271 (17%)
Query: 105 RRKDSL--DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLV 162
R KDSL ++ LG + ++ A+ + Q G VT + + L+TG+++AVV V
Sbjct: 69 RVKDSLIEENDLLGNYMCIMSAKSQLDIPRRQSGGAVTAMLVNALETGLIDAVVVVAE-- 126
Query: 163 ILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK-----PTLSPNLNTLALVEAAGVKRL 217
DP L P + + V++ G + P +S LN + + + +
Sbjct: 127 --------DPW-TLKPYSAVISDSDSVVSKAGSRYNWWVPLVSA-LNDAVIRQK--YRNI 174
Query: 218 LFCGVGCQVQALRSV-EHHLNLEKLY------VLGTNCVDNGTREGLD--KFLKAASSEP 268
GV C QA+ + E L+L + ++G C E D K L+ S
Sbjct: 175 AVVGVPCVAQAISRIRESDLDLLMPFRDSIRLMIGLFCT-----ETFDYVKLLEEKLSRE 229
Query: 269 ETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG 328
++L ++ ++ + V K L+ +++ P ++L D + P C C D+T +D+ G
Sbjct: 230 HSILPFK-VERFDVKGK-LEITLDDGNTITFPLSELEDCVRPGCNVCTDFTANYSDISAG 287
Query: 329 YMGVPK-YTGISMTQHPQYITVRNERGKEML 358
+G P YT + +R E+GK++L
Sbjct: 288 SVGSPDGYT---------TLIIRTEKGKKLL 309
>gi|337284577|ref|YP_004624051.1| Coenzyme F420 hydrogenase/dehydrogenase subunit beta [Pyrococcus
yayanosii CH1]
gi|334900511|gb|AEH24779.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit [Pyrococcus
yayanosii CH1]
Length = 275
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 46/264 (17%)
Query: 108 DSLDDTYLGVH------EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSL 161
D+L + +GV+ EE+L K K G G VT + I L+ G+++ VV + +
Sbjct: 5 DNLLGSVVGVYLARAKDEEIL---KRKVASG----GAVTAMLIYALEKGLIDGVVTAKRV 57
Query: 162 VILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFC 220
+ V+ART EE+L G K ++ P + A +E +K++
Sbjct: 58 ------------SGFEGQAVVARTREEILETAGNKWSIVPFAARVKAKIEEEDLKKVAIV 105
Query: 221 GVGCQVQALRSVEHHLNLEK------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHY 274
+ CQ Q + LE Y++ C+ E +L+ +
Sbjct: 106 CLPCQAQFFGQMREFPILETDFGERIRYIVSLFCMGTFAFEAFLNYLRMKYDIKAEEIKN 165
Query: 275 EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 334
+++ + ++H D ++ LP ++ + C C DYT +D+ G+ + K
Sbjct: 166 MALKEGFLEIQHDDSLLQ------LPLKEVYSYLQTGCLVCADYTGTWSDISAGF--IEK 217
Query: 335 YTGISMTQHPQYITVRNERGKEML 358
G ++ I RN RG+E++
Sbjct: 218 EKGWTV------IITRNARGEELV 235
>gi|325958619|ref|YP_004290085.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanobacterium sp. AL-21]
gi|325330051|gb|ADZ09113.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanobacterium sp. AL-21]
Length = 426
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 20/230 (8%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
DT++G Y+ + G++T I I L+ G+++ + +
Sbjct: 89 DTFIG------YSTNMHIRYNSSSGGMITQILISSLELGIIDGALVTRM----------K 132
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 231
+ L P P +A+T EE++ A K P + L + +K++ G+ C + +R
Sbjct: 133 KGNPLIPEPFIAKTKEEIIEASKSKYCPVPLNSALNELMTTKLKKIAVVGLPCHIHGIRK 192
Query: 232 VE---HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM-QDYKVHLKHL 287
E + L + + LG C+ T G LK S E + + E+ + + +K +
Sbjct: 193 AEKINNKLRKKIIIHLGIFCIYTPTFNGTKLLLKKLSLNEEKIKNIEYRGKGWPGSMKII 252
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
D E + L I C C D TN LAD+ G +P+Y+
Sbjct: 253 DHKHEIIVNEYWKFIGLNFFIPFRCLKCCDGTNELADISFGDAWLPEYSN 302
>gi|154151235|ref|YP_001404853.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanoregula
boonei 6A8]
gi|153999787|gb|ABS56210.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoregula boonei 6A8]
Length = 340
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 92/232 (39%), Gaps = 33/232 (14%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG H +L A+ T + Q G VT I L+ G+++AVV V DP
Sbjct: 78 LGAHLDLFTAKSTFAIPHRQSGGAVTAILANALEQGLIDAVVTV----------TEDPWT 127
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR----LLFCGVGCQVQALR 230
L P + E ++ G + L LA ++ A + R + GV C VQA
Sbjct: 128 -LKPSSAVITKSEVLIREAGSRYGWWVPL--LAALKEACITRKYTKVAVIGVPCAVQAAA 184
Query: 231 SVEHHLN-LEKLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYK 281
+ N L + Y V+G C + GL K K P + +
Sbjct: 185 RIRSSDNDLLRPYAKGIRLVVGLFCTETFDYAGLVHGKLEKKYHLAPHEIKKLDVKGKLD 244
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ LK D H+ +P DL + I P C C D+++ ADL G +G P
Sbjct: 245 I-LKQDDSHLS------IPLADLEETIRPGCRICTDFSSLSADLSAGSVGSP 289
>gi|410720758|ref|ZP_11360111.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
gi|410600469|gb|EKQ54997.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
Length = 370
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 215 KRLLFCGVGCQVQALRSVEHHLNL----EKLYVLGTNCVDNGTREGLDKFLKAASSEPET 270
K + G C + A +EH+ + + LG C++N + L +FLK E +
Sbjct: 7 KSVTLVGTPCHIIAAEKMEHYPEILGDSPVDFKLGLFCMENFSHTYLKEFLKQNDIEMDD 66
Query: 271 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYM 330
+ ++V HL +++ F +P + + +C C DYT+ LADL VG +
Sbjct: 67 I------DQFRVEKGHLWTYLKNGDVFKVPLSQAKICMRKNCQVCMDYTSELADLSVGSV 120
Query: 331 GV-PKYTGISMTQHPQYITVRNERGKEMLSLVKN--LLEITPTISSG 374
G P ++ I +R E+G + LS +N +E P G
Sbjct: 121 GSDPGWST---------IIIRTEKGLKALSKAENEGYIETKPITQQG 158
>gi|336121461|ref|YP_004576236.1| coenzyme F420 hydrogenase [Methanothermococcus okinawensis IH1]
gi|334855982|gb|AEH06458.1| Coenzyme F420 hydrogenase., Ferredoxin--nitrite reductase
[Methanothermococcus okinawensis IH1]
Length = 626
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 135/337 (40%), Gaps = 79/337 (23%)
Query: 65 CSRCGLCDTYYIA---------HVKDACAFLGDGMS-----RIEGLETVVHGRGRRKDSL 110
C++CG+C I +KD C G+GM R+ G+ + +
Sbjct: 19 CAKCGMCVVVCIKDLLTFEGVPKLKDECLRKGNGMCYDVCPRVSS--------GKYQIKI 70
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNS 170
+ + EE YA+ +EG Q G+VT +L+ ++ + V
Sbjct: 71 RENF---KEEYYYAKSD--IEG-QDGGVVTAFLKYLLENKKIDGAIVV------------ 112
Query: 171 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
D+ P ++ + E++L K T+S L+ L G++++ G+ CQ+ LR
Sbjct: 113 -GDECWKPVSLVVQNAEDLLKTTKSKYTVSI-LDALKKAGEMGLEKVAVVGLPCQINGLR 170
Query: 231 SVEHHLNLEKL--------------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEF 276
+++ L K Y++G C + + + + L A E + +F
Sbjct: 171 KLQYFPYLAKYDKKECKNKKLPKIEYLIGLFCTEKFEYDNMKEVL--AKHEIDIAKVEKF 228
Query: 277 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKY 335
L +++G +E DL D+ I C C D+ +AD+ VG +G P
Sbjct: 229 DVKGGKLLAYINGEKKEF--------DLKDIEINKGCKICRDFDAEIADVSVGCVGSP-- 278
Query: 336 TGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 372
G S + +R E+G+E +KN +E+ +
Sbjct: 279 DGYST------VIIRTEKGEE----IKNAVELKEGVD 305
>gi|268323845|emb|CBH37433.1| coenzyme F420-reducing hydrogenase, subunit beta related
[uncultured archaeon]
Length = 371
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 30/234 (12%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVI 163
R D+L Y G ++L AR T +E AQ G+V+ + I +L+ G ++A V
Sbjct: 78 RTDNLLGYYKG---DILTARATDKAVMEKAQDGGVVSALLIFLLEHGDIDAAVV------ 128
Query: 164 LSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVG 223
S + P +A +++AA G K T P+++ + G + + G+
Sbjct: 129 ------SKTTEDWVAEPFVATKKADIIAAAGSKYTQCPSVSGVGDALEQGYENVALVGLP 182
Query: 224 CQVQALRSVEHHLNLE------KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
C +Q +R V+ + KL ++G C + L L + E V +
Sbjct: 183 CHIQGMRKVQQSTGFDVGSDRVKL-LIGLLCSETFDMPMLKNKLLELGTRIEDVEKFNIK 241
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 331
+ + ++ P ++ D + +C C+D+ AD+ VG +G
Sbjct: 242 KGSFIVYTKAGKELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIG 289
>gi|301060801|ref|ZP_07201616.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
domain protein [delta proteobacterium NaphS2]
gi|300445198|gb|EFK09148.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
domain protein [delta proteobacterium NaphS2]
Length = 320
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 38/238 (15%)
Query: 134 QWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAK 193
Q G VT +A L+ G+V+A + +S D LS P + RT +V A
Sbjct: 43 QHGGTVTALAAFALEQGLVDAWIMARS------------HDSLSGVPTVCRTRAQVQACA 90
Query: 194 GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE--HHLNL----EKL-YVLGT 246
G K T P + R CQ AL ++ H L EKL V+G
Sbjct: 91 GTKLTSVPVVGGFLEAAFKDPGRFGVVATPCQCLALAKIKASDHPRLRQAAEKLALVVGL 150
Query: 247 NCVDNGTREGLDKFLKAASS--EPETVLHYEF----MQDYKVHLKHLDGHIEEVPYFCLP 300
C G G + +A S +P+ V + Q +V +K + + P
Sbjct: 151 FC---GWSFGHRELSRALSGRVDPDDVTGLDIPPSRHQSLEVFIKGRETSV--------P 199
Query: 301 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
+ + + P+C CFD T ADL VG +P G +H VR++ G+++L
Sbjct: 200 LSKVTGAVRPACAYCFDMTAEPADLSVGSARLPG--GWDEARHWNQTVVRSQMGEDLL 255
>gi|258404555|ref|YP_003197297.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796782|gb|ACV67719.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfohalobium retbaense DSM 5692]
Length = 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 182 LARTPEEVLAA--KGVKPT----LSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH 235
LARTP+++ A KG+ + + +L L V G++R+ F G CQV+ +R +E
Sbjct: 137 LARTPDQLRALDDKGLTTSQVRAAASSLEVLGSVRKTGLRRVAFMGTPCQVETVRKMEIL 196
Query: 236 L--NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK-VHLK-HLDGHI 291
E+LY C +G D L A + L + D + + L+ HL+ +
Sbjct: 197 AVPPAERLYCT-IGCFCDG-----DFLLGPAQQDRLEKLGFFRWNDVRHITLRDHLEFWL 250
Query: 292 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
E +P DL + +C C DY+ ADL VG G P + + P
Sbjct: 251 AEGKTRDIPMEDLDFMRRYACRLCTDYSAQFADLAVGGTGAPHGWSTVIARTP 303
>gi|307353407|ref|YP_003894458.1| coenzyme F420 hydrogenase [Methanoplanus petrolearius DSM 11571]
gi|307156640|gb|ADN36020.1| Coenzyme F420 hydrogenase [Methanoplanus petrolearius DSM 11571]
Length = 338
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 42/263 (15%)
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNS 170
D LG + + A+ V G Q G VT + ++G+++ V+ V
Sbjct: 75 DKKMLGEYISIGSAKSAFEVPGRQSGGAVTALLSNAFESGLIDGVITVS----------- 123
Query: 171 DPDDRLSPRP--VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVK----RLLFCGVGC 224
+DR + P VL + E + A+ G + + TLA ++ A +K R+ G C
Sbjct: 124 --EDRWTHEPFSVLITSDEAITASAGSRYNWW--VPTLASLKEAVIKKKLSRIAVVGTPC 179
Query: 225 QVQALRSVEHHLN-LEKLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYE 275
VQALR ++ N L K + ++G C + L K EP + ++
Sbjct: 180 AVQALRKMKESDNDLVKPFGSSIRLIIGLFCTETFDYGKLIEGKLKSELDIEPWNIKSFD 239
Query: 276 FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY 335
++ +K DG ++ + +L + I P C+ C D+T +D+ G +G +
Sbjct: 240 VKG--RLEIKMNDGSVQVISL-----KELEECIRPGCFHCTDFTAVDSDISAGSVGSEEG 292
Query: 336 TGISMTQHPQYI-----TVRNER 353
+ ++ + + VRNE+
Sbjct: 293 LTTLIIRNKEGMGFVDSAVRNEK 315
>gi|11499420|ref|NP_070660.1| F420H2:quinone oxidoreductase, 39 kDa subunit [Archaeoglobus
fulgidus DSM 4304]
gi|2648713|gb|AAB89418.1| F420H2:quinone oxidoreductase, 39 kDa subunit, putative
[Archaeoglobus fulgidus DSM 4304]
Length = 379
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 38/256 (14%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG + E++ AR + V Q +VT L+ G++E + V D
Sbjct: 117 LGEYIEVVAARSKRFV--GQDGAMVTEFTASALEMGIIERAIFVAR------------DS 162
Query: 175 RLSPRPVLARTPEEVLAAK--GVKPTLSPNLNTL--ALVEAAGVKRLLFCGVGCQVQALR 230
R V +TPE++ K G K + + L L A++++ V F G C V A+R
Sbjct: 163 NWRTRVVTIKTPEQLYDRKITGTKYSYADVLPALKEAVLKSEAVG---FVGTPCMVSAVR 219
Query: 231 SVEHHLN-LEKLYV-LGTNCVDNGTREGLDKFL-KAASSEPETVLHYEFMQDYKVHLKHL 287
++ E++ + +G C +N L KFL + A+++ + + ++ K ++
Sbjct: 220 KMQQAFKKFERVKLAIGLFCTENFYHHDLYKFLLEKANADLRNAVKTD-IKKGKFIVEMK 278
Query: 288 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
DG +P D ++I C C D+ +D+ VG +G P M
Sbjct: 279 DGSKVRIP-----VKDFEEIIPSGCKVCQDFAAVESDVSVGSVGSPNRFSTVM------- 326
Query: 348 TVRNERGKEMLSLVKN 363
VR E K++L ++
Sbjct: 327 -VRTEVAKQILDYIRE 341
>gi|298674974|ref|YP_003726724.1| coenzyme F420 hydrogenase [Methanohalobium evestigatum Z-7303]
gi|298287962|gb|ADI73928.1| Coenzyme F420 hydrogenase [Methanohalobium evestigatum Z-7303]
Length = 386
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 128 KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPE 187
K +EG Q +VT++ L G+++ I++ N +P P P++A + E
Sbjct: 133 KGLEG-QDGAVVTSMLAYALDEGLIDCA-------IVTTTSNEEP---WKPIPIVATSYE 181
Query: 188 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNLEK 240
E++ A+G K S + L G++ + F G C + A+ ++ H
Sbjct: 182 ELVKARGSKYIHSMTMEALMGAIQEGMRSIAFVGTSCNIDAVTKMQKSPYGFLHMFMRAN 241
Query: 241 LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 300
+ LG C+D +G+ +F++ + E + + M+ K + G +EV + L
Sbjct: 242 ILKLGLFCMDTFYYDGIKEFVENHGMKLEAI---DSMKIRKGRFEFYMG--DEVRSYNL- 295
Query: 301 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+D + SC C D + AD+ G +G P
Sbjct: 296 -SDFDSYRSSSCRFCTDLASENADISFGGIGSP 327
>gi|390961312|ref|YP_006425146.1| coenzyme F420-reducing hydrogenase subunit beta [Thermococcus sp.
CL1]
gi|390519620|gb|AFL95352.1| coenzyme F420-reducing hydrogenase subunit beta [Thermococcus sp.
CL1]
Length = 276
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 35/235 (14%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G VT + L+ G+++ +V S L V+ART EE+L G +
Sbjct: 34 GAVTAMLTYALEKGLIDGIV------------TSKRTKGLEGEAVVARTKEELLETAGNR 81
Query: 197 PTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK------LYVLGTNCV 249
++ P + A +E +K++ + CQ Q + LE Y++ C+
Sbjct: 82 WSIVPFAARIKAKIEEEDLKKVAVVCLPCQAQFFGQMRDFPILEADFGNRIRYIVSLFCM 141
Query: 250 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 309
E +L+ + E + D K+ L+ H E +P + +
Sbjct: 142 GTFAFEAFLNYLRVKYG-----VRAEEIVDIKLTRDFLEIH-RESGVLTIPLREAFSYLQ 195
Query: 310 PSCYSCFDYTNALADLVVGYM-GVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 363
C C DYT +D+ G++ P +T I RN+RG+E++ +N
Sbjct: 196 TGCLVCSDYTGVWSDISAGFVESEPGWT---------VIITRNQRGEELVRGAEN 241
>gi|435852351|ref|YP_007313937.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662981|gb|AGB50407.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 343
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 39/242 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
Q G+ + I E+L+ G ++ VV + ++ VL PE+V
Sbjct: 92 GQDGGVTSHILKELLRKGEIDCVVGISR------------NNVWETELVLMTKPEDVDKT 139
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 252
G K T L L R+ GV CQ R + ++N + + ++G C+++
Sbjct: 140 TGTKYTYDSVLEALKE-PFEKYNRIAVVGVPCQAHGARLISENVNDKIVLIVGLLCMESF 198
Query: 253 TREGLDKFL--KAASSEPETVLHYEF----MQDYKVHLKHLDGHIEEV-PYFCLPANDLV 305
E + + + + + V+ +F +Y + I EV PY P
Sbjct: 199 YHETMREKIVPEIMKLNVDDVVKMDFGKGKFWNYTKDGQEHSVKIAEVAPYARHP----- 253
Query: 306 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLL 365
C++C DYT+ AD+ VG +G P + +R + G+ +VK+ L
Sbjct: 254 ------CHNCCDYTSVFADISVGSVGTPDGWNC--------VLIRTDEGQRYFDMVKDTL 299
Query: 366 EI 367
EI
Sbjct: 300 EI 301
>gi|312136920|ref|YP_004004257.1| nitrite and sulfite reductase 4fe-4S region [Methanothermus
fervidus DSM 2088]
gi|311224639|gb|ADP77495.1| nitrite and sulphite reductase 4Fe-4S region [Methanothermus
fervidus DSM 2088]
Length = 629
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
Q G+V+T +LK ++ + V D+ P + + P+++ +
Sbjct: 93 GQDGGVVSTFLKYLLKKRKIDGAIVVG-------------DELWKPTSWIIKDPDDIEKS 139
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL----------- 241
K T+S L+ L G K + G+ CQ+Q LR +++ L K
Sbjct: 140 AKSKYTVS-TLDALKKASEIGCKEVAVVGLPCQIQGLRKIQYFPYLAKYDGELGKDGKPT 198
Query: 242 ------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 295
Y++G C++ + + L+ + E V ++ + L +L E+P
Sbjct: 199 SLPKIKYLIGLFCMEKFEHDSFYETLEKHGIDIEKVEKFDIKGNK--LLVYLKNEKHEIP 256
Query: 296 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 355
L + C C D+ + +AD+ VG +G P+ G S I +R ++G+
Sbjct: 257 LKELD-------VCSGCKICRDFDSEMADVSVGSVGSPE--GYST------IIIRTKKGE 301
Query: 356 EMLSLVK 362
E+ + VK
Sbjct: 302 EIKNAVK 308
>gi|256811073|ref|YP_003128442.1| nitrite and sulfite reductase 4Fe-4S region [Methanocaldococcus
fervens AG86]
gi|256794273|gb|ACV24942.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
fervens AG86]
Length = 620
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 41/218 (18%)
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 232
D+ P ++ + +++L + K +S L+ L G++R+ G+ CQ+ LR +
Sbjct: 110 DECWKPVSLVVQNADDLLKSAKSKYAIS-TLDALRKAGEMGLERVAVVGLPCQINGLRKL 168
Query: 233 EHHLNLEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYE 275
++ L K Y++G C + E + + L + E V ++
Sbjct: 169 QYFPYLAKHDGELGKDGKPTKLPKIEYLIGLFCTEKFKYENMKEVLSKHGIDIEKVEKFD 228
Query: 276 FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPK 334
++D K+ L ++G +E+ DL + I P C C D+ +AD+ VG +G P+
Sbjct: 229 -IKDGKL-LACINGEKKEI--------DLKEFEICPGCKICRDFDAEMADVSVGCVGSPE 278
Query: 335 YTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 372
G S IT+R ++G+E +KN +E+ +
Sbjct: 279 --GYST------ITIRTKKGEE----IKNAIELKEGVD 304
>gi|327400433|ref|YP_004341272.1| coenzyme F420 hydrogenase [Archaeoglobus veneficus SNP6]
gi|327315941|gb|AEA46557.1| Coenzyme F420 hydrogenase [Archaeoglobus veneficus SNP6]
Length = 331
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 40/247 (16%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
++A K+ G Q G+VT I ++ G++EA V+ D+ P
Sbjct: 92 IFAAKSNRFSG-QDGGMVTEILASAMEMGIIEAAAVVRR------------DEEWKPAAF 138
Query: 182 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHL----N 237
+A++ EE++ A G K + + + L + AG G C V R ++ + N
Sbjct: 139 VAKSVEELVQASGTKYSYA---DVLPALRKAGKVSAAIVGTPCMVSGARKLQQNFAKYRN 195
Query: 238 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY- 296
+L V+G C +N E L +FL++ + V K+ +K G P
Sbjct: 196 NIRL-VVGLFCTENFYYEDLRRFLESKGIDISRV--------EKMDIKK--GKFIVSPQG 244
Query: 297 FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 356
P ++ +++ C C D+ +D+ +G +G G S + VR+E K+
Sbjct: 245 VSFPVKEMDEIVPSGCKVCQDFAAVESDVSIGSVGASD--GFSA------VIVRSEVAKQ 296
Query: 357 MLSLVKN 363
++ ++
Sbjct: 297 IVDYIRE 303
>gi|296110016|ref|YP_003616965.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[methanocaldococcus infernus ME]
gi|295434830|gb|ADG14001.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus infernus ME]
Length = 613
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 53/262 (20%)
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSP 178
EE YA+ +EG Q G+VTT +L+ G ++ + V D+ P
Sbjct: 72 EEYYYAKGD--IEG-QDGGVVTTSLKYLLEKGEIDGAIVVGR------------DEYWKP 116
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH--- 235
++ +T E+++ K T+S L L G+K++ G+ CQ+ LR +++
Sbjct: 117 VSMVVQTAEDIVKGAKSKYTVS-TLEALRKAGELGLKKVAVVGLPCQINGLRKLQYFPYH 175
Query: 236 -------------LNLEKL-YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 281
+ L K+ Y +G C + + L+ + V ++ +
Sbjct: 176 SRHDFEIGKDGKPVKLPKIEYFIGLFCTKKFEYDNFKEVLEKYGVNIKDVEKFDIKKGK- 234
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAP--SCYSCFDYTNALADLVVGYMGVPK-YTGI 338
L +L ++E+P + P C C D+T L+D+ VG +G P+ YT +
Sbjct: 235 -LLVYLKNEVKEIP---------IKEFKPLSGCKVCKDFTAELSDISVGSVGSPEGYTTV 284
Query: 339 SMTQHPQYITVRNERGKEMLSL 360
+ T + E+ KE L L
Sbjct: 285 IIR------TKKGEKIKEALEL 300
>gi|330508801|ref|YP_004385229.1| iron-sulfur cluster/F420 dehydrogenase/hydrogenase fusion protein
[Methanosaeta concilii GP6]
gi|328929609|gb|AEB69411.1| iron-sulfur cluster/F420 dehydrogenase/hydrogenase fusion protein
[Methanosaeta concilii GP6]
Length = 474
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 47/259 (18%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
D LGV+ EL AR ++G Q G+VT++ L G+++A V V Y +
Sbjct: 205 DVDLGVYSELFAART--EIQG-QDGGVVTSLLARCLDKGVIDAAVVV---------YQRE 252
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 231
+ R E V+ AKG K L L G +R+ G CQ++ +R
Sbjct: 253 NN---GGRAAAVDDIEGVIKAKGTKYVRVSALAPLIDALRGGKRRVAVVGTPCQIRVIRK 309
Query: 232 VEH------HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+E +++++G C ++ L K +L + K+ +
Sbjct: 310 LEQLDYFKDEFPDAEIFLVGLFCFESFDYRRLRDHAKG-------LLGIDIEDADKIQIA 362
Query: 286 H------LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
LDG + + C +L + I C C D + LAD+ +G +G
Sbjct: 363 KGRYIATLDG----MEHSC-SVRELENDIREGCRFCGDLVSRLADISIGSVG-------- 409
Query: 340 MTQHPQYITVRNERGKEML 358
+ + VR+E+GK++L
Sbjct: 410 SAEGYSSVIVRSEKGKKLL 428
>gi|284162671|ref|YP_003401294.1| coenzyme F420 hydrogenase [Archaeoglobus profundus DSM 5631]
gi|284012668|gb|ADB58621.1| Coenzyme F420 hydrogenase [Archaeoglobus profundus DSM 5631]
Length = 405
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 153 EAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAK--GVKPTLSPNLNTL-ALV 209
E + C + I+ D+R P V + P+++ + + G K +L+P L L ++
Sbjct: 174 EFIACALEMGIIDTALMVSRDERWKPIIVHVKHPDQLKSERITGTKYSLAPVLPELNKVI 233
Query: 210 EAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTN--CVDNGTREGLDKFLKAASSE 267
+ AG RL G C + LR ++ + L L + C++N L +FL+ + +
Sbjct: 234 KRAG--RLAIVGTPCIITGLRLLQKEIPLYNKVKLAVSLFCMENFRYSSLMEFLREKNID 291
Query: 268 PETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 327
V ++ ++ K ++ +DG F P +L + ++ C C D+ +D+ +
Sbjct: 292 ATKVKKFD-IKKGKFIVEMVDG------VFDCPIKELEEHVSNGCNYCLDFAGVDSDVSI 344
Query: 328 GYMGVP 333
G +G P
Sbjct: 345 GSVGSP 350
>gi|428776032|ref|YP_007167819.1| coenzyme F420 hydrogenase [Halothece sp. PCC 7418]
gi|428690311|gb|AFZ43605.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halothece sp. PCC 7418]
Length = 474
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G+++ I +L+TG ++ V ++ S DR +P++A T EE+LAA
Sbjct: 121 GVISRTLIYLLETGRIDGAVVLRQ--------GSPTPDRA--QPLIATTAEEILAAAQSV 170
Query: 197 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---HHLNLEKLYVLGTNCVDNGT 253
++P L L + A RL F G+ QV ALR ++ H + ++V G N
Sbjct: 171 YAVTPMLTILPEI-ATFDGRLAFVGLPEQVAALRMLQAAGHPTAQKVVFVAGPYTGTNMY 229
Query: 254 REGLDKFLKAASSEPE---TVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDV-I 308
+ FL++ + T L + + + ++ DG + F N L+ I
Sbjct: 230 LGAVRAFLRSRGVSDQIAITKLQWRAGEWPGYLQVETADGQVFRAKKFYY--NYLIPFYI 287
Query: 309 APSCYSCFDYTNALADLVVGYMGVPKY 335
+ +C D+TN L DL VG P++
Sbjct: 288 SRNCQITPDFTNELTDLSVGDAWSPQF 314
>gi|333910914|ref|YP_004484647.1| Coenzyme F420 hydrogenase., hydrogensulfite reductase
[Methanotorris igneus Kol 5]
gi|333751503|gb|AEF96582.1| Coenzyme F420 hydrogenase., Hydrogensulfite reductase
[Methanotorris igneus Kol 5]
Length = 617
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 57/275 (20%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
EE Y + +EG Q G+VTT +L+ G ++ + V D+
Sbjct: 71 KEEYYYGKGD--IEG-QDGGVVTTFLKYLLENGKIDGAIVV-------------GDECWK 114
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 237
P ++ + E++L K +S L+ L G++++ G+ CQ+ LR +++
Sbjct: 115 PVSLVVQNAEDLLKTAKSKYAVS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPY 173
Query: 238 LEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
L K Y++G C + + + + L + E V ++ +
Sbjct: 174 LAKHDGELGKNGKPVKLPKIEYLIGLFCTEKFDYDNMKEVLAKHGIDIEKVEKFDIKKGK 233
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
L +++G +E+ DL + I C C D+ +AD+ VG +G P G S
Sbjct: 234 --LLVYINGEKKEI--------DLKEFEICSGCKMCRDFDAEMADVSVGCVGSP--DGYS 281
Query: 340 MTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 374
+ +R E+G+E +KN +E+ + G
Sbjct: 282 T------VIIRTEKGEE----IKNAVELKEGVDLG 306
>gi|409393725|ref|ZP_11245022.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas sp. Chol1]
gi|409121716|gb|EKM97779.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas sp. Chol1]
Length = 416
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 24/233 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G+++ +A L+ +V+ V+ +Q+ +DP + ++ ++R+ + ++A+ G +
Sbjct: 108 GVISALAQYCLEQKLVDGVIQIQA-------SQTDPLENVA---TISRSRQNIIASSGSR 157
Query: 197 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGT 253
+ L V A ++ LF G C V A+R ++ H L YV+ C +
Sbjct: 158 YAPASPAQALKWV-AMSTEKYLFIGKPCDVAAVRQMQAHDPRLKQNIPYVVSFMCAGTPS 216
Query: 254 REGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDLVDVI 308
G ++ L E E V + + D K LK +G + Y L +
Sbjct: 217 LHGTEQVLDQLGVEREDVTSFRYRGDGWPGLTKATLK--NGDARTMTYNDSWGKVLNRHL 274
Query: 309 APSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 358
C C D AD+V G+ G K Y I +R ++G+E+
Sbjct: 275 QTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEERDGNSLILIRTDKGRELF 327
>gi|408382471|ref|ZP_11180015.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814826|gb|EKF85449.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
Length = 374
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 215 KRLLFCGVGCQVQALRSVEHHLNL----EKLYVLGTNCVDNGTREGLDKFLKAASSEPET 270
K + G C + A +EH+ N+ + LG C++N + L +FLK + E
Sbjct: 7 KSVTLVGTPCHIIASEKMEHYSNILGDSPVDFKLGLFCMENFSHSYLKEFLKQNNIEMND 66
Query: 271 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYM 330
+ ++V HL +++ F P + + +C C DYT+ LADL VG +
Sbjct: 67 I------NQFRVEKGHLWAYLKNGDVFKAPLSQAKVCMRKNCQVCMDYTSELADLSVGSV 120
Query: 331 GVPKYTGISMTQHPQYITV--RNERGKEMLS 359
G P + TV R E+G + L+
Sbjct: 121 G----------SAPGWSTVIARTEKGLKALN 141
>gi|448406549|ref|ZP_21573003.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halosimplex carlsbadense 2-9-1]
gi|445677120|gb|ELZ29623.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halosimplex carlsbadense 2-9-1]
Length = 551
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 55/261 (21%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVE-AVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEV 189
EGAQ G+VT++ + +L+ G ++ A++ +S DD LA TPEE
Sbjct: 264 EGAQDGGLVTSVLVHLLEAGEIDGALIATES-----------DDDPWKAEAFLATTPEEC 312
Query: 190 LAAKGVKPTLSPNLNTLAL----------VEAAGVKRLLFCGVGCQVQALRSVE------ 233
+ G + L TL L +E A L G C+++ +R++E
Sbjct: 313 IDNAGSVYNQTMALGTLDLERWDHKLDVPIEEAS---LALVGTPCEIEGIRALEDFEWEY 369
Query: 234 --HHLNLEKL-YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLD 288
+ + Y + C N E L ++ ++ + + V + + D K+ + +
Sbjct: 370 GSQEAGVRAIDYRIALMCTKNFNYERLMGEQLVEQRDVDLDDVGKMDVL-DGKMLVYDRE 428
Query: 289 GHI---EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 345
G + E+V +F D C C D+T ADL VG +G +
Sbjct: 429 GELIVDEDVEHF-------HDAALKGCDECADFTGYCADLTVGSVG--------SSDEYS 473
Query: 346 YITVRNERGKEMLSLVKNLLE 366
+ VR E+G + +L K L+
Sbjct: 474 SVIVRTEQGLDAWNLTKGDLD 494
>gi|374628017|ref|ZP_09700402.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoplanus limicola DSM 2279]
gi|373906130|gb|EHQ34234.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoplanus limicola DSM 2279]
Length = 338
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 56/280 (20%)
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDR 175
G + ++ AR + + G Q G V+ I ++ L+ G ++AV+ V S+
Sbjct: 81 GEYRRIVPARSSFEITGKQSGGAVSAILLDGLERGTIDAVITV-----------SEDGWT 129
Query: 176 LSPRPVLARTPEEVLAAKGVK-----PTLSPNLNTLALVEAA-GVK--RLLFCGVGCQVQ 227
P V+ + E +L G + P L+ AL EA G K ++ G C VQ
Sbjct: 130 RKPYSVMITSKEAILMKAGSRYNWHVPVLT------ALNEAVVGRKYSKIAIVGTPCVVQ 183
Query: 228 ALRSVEHHLN-LEKLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQ 278
A R ++ N L K + ++G C ++ E L K + EP + +
Sbjct: 184 AARLMKESTNDLVKPFGNAIRLIIGLFCTESFDYERLMEGKLKTDMNIEPWQIRRMDVKG 243
Query: 279 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 338
++ DG + + LP +L I C C D+T ++DL G +G
Sbjct: 244 KLEITT---DGEVVD-----LPLAELDGCIKEGCRICTDFTGLMSDLSAGSVG------- 288
Query: 339 SMTQHPQYIT--VRNERGKEMLS--LVKNLLEITPTISSG 374
P Y T +RN+ G+ +S ++ LEI+ I+ G
Sbjct: 289 ---SEPDYTTLVIRNDTGEGFVSNAVMSGKLEISGDINLG 325
>gi|294496439|ref|YP_003542932.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain protein
[Methanohalophilus mahii DSM 5219]
gi|292667438|gb|ADE37287.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalophilus mahii DSM 5219]
Length = 333
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 42/251 (16%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
EE + A+ + G Q G V+ I + L+ G+++AVV V DP L
Sbjct: 79 REEYMAAKAGFEIPGKQSGGAVSAILYDSLERGIIDAVVTV----------TEDPW-TLK 127
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSVEH 234
P+ + + E ++++ G + L AL EA K + + C +A+ +
Sbjct: 128 PKSSVIMSSEALISSAGSRYNWWVPL-LAALKEAVIRKKCKNIAIVALPCAARAVEKLRK 186
Query: 235 HLNLEKL--------YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHL 284
N E L YV+G C ++ E L K P + + V L
Sbjct: 187 SDN-ELLGPFAKSIKYVIGLFCTESFDYEKLMEGKLKSELQINPHDIERMDVRGKLVVKL 245
Query: 285 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
K+ EE+ +P D+ D I P C+ C D+ AD+ G +G P Q
Sbjct: 246 KN-----EEIS---IPLKDIEDTIRPGCHICKDFDALYADIAAGSVGSP--------QGY 289
Query: 345 QYITVRNERGK 355
+ VR++ GK
Sbjct: 290 TTLIVRSDTGK 300
>gi|374636587|ref|ZP_09708150.1| nitrite and sulphite reductase 4Fe-4S region [Methanotorris
formicicus Mc-S-70]
gi|373558544|gb|EHP84881.1| nitrite and sulphite reductase 4Fe-4S region [Methanotorris
formicicus Mc-S-70]
Length = 616
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 55/261 (21%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEV 189
VEG Q G+VTT +L+ G ++ + V ++ P ++ + E++
Sbjct: 81 VEG-QDGGVVTTFLKYLLENGKIDGAIVV-------------GEECWKPVSLVVQNAEDL 126
Query: 190 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK--------- 240
L K T+S L+ L G++++ G+ CQ+ LR +++ L K
Sbjct: 127 LKTAKSKYTVS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYLSKHDGELGKNG 185
Query: 241 --------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 292
Y++G C++ + + + L + E V ++ + L +++G +
Sbjct: 186 KPVKLPKIEYLIGLFCMEKFDYDNMKEVLAKHGIDIEKVEKFDIKKGK--LLVYINGDKK 243
Query: 293 EVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 351
E+ DL + I C C D+ ++AD+ VG +G P G S + +R
Sbjct: 244 EI--------DLKEFEICSGCKMCRDFDASMADVSVGSVGSP--DGYST------VIIRT 287
Query: 352 ERGKEMLSLVKNLLEITPTIS 372
E+G+E +KN +E+ ++
Sbjct: 288 EKGEE----IKNAVELKEGVN 304
>gi|333910174|ref|YP_004483907.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333750763|gb|AEF95842.1| Coenzyme F420 hydrogenase., Selenate reductase [Methanotorris
igneus Kol 5]
Length = 534
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 39/265 (14%)
Query: 120 ELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
E++ AR T + ++ Q GI +T+ +L+ G++ +C + +
Sbjct: 74 EIVIARSTIKEILKNCQDGGITSTLVYTLLEDGVIS--ICAGN------------KEEWK 119
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE--HH 235
P V E +L G K T P L+ L + K++ G+ CQ++AL ++E +
Sbjct: 120 PDVVTVEDKETLLKTLGSKYTFVPVLSKLHDEVVSKDKKIAVVGLPCQIRALHNMEKTYF 179
Query: 236 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 295
Y +G C N + K ++ + E V+ + + K+ DG
Sbjct: 180 RKYNVHYKIGILCTHNFSYTTFKKIVEDLGLKVEDVIKVDINKG-KMIFYTKDGEKS--- 235
Query: 296 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 355
+P + L D+ C+ C + + AD+ +G MG P + + +++GK
Sbjct: 236 ---IPVSKLDDLCDECCHQCPELYSRFADINIGSMGSP--------DGWNTVIIMSKKGK 284
Query: 356 EML--SLVKNLLEI----TPTISSG 374
E+ +L K +EI P I G
Sbjct: 285 ELFEKALKKGYIEIYDKEDPKIQKG 309
>gi|146282838|ref|YP_001172991.1| hypothetical protein PST_2497 [Pseudomonas stutzeri A1501]
gi|145571043|gb|ABP80149.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 416
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 24/247 (9%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YA + + G+++ +A L+ +V+ V+ +Q+ +SDP + ++ +
Sbjct: 94 YATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQA-------SHSDPLENVA---TI 143
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLE 239
+R+ + ++A+ G + + L V A ++ LF G C V A+R ++ H L
Sbjct: 144 SRSRQNIIASSGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHDPRLKEN 202
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEV 294
Y++ C + +G ++ L E + V + + D K LK +G +
Sbjct: 203 IPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYRGDGWPGLTKATLK--NGDERTM 260
Query: 295 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRN 351
Y L + C C D AD+V G+ G K Y + I VR
Sbjct: 261 TYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT 320
Query: 352 ERGKEML 358
+G+E+
Sbjct: 321 AKGRELF 327
>gi|419955841|ref|ZP_14471962.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri TS44]
gi|387967344|gb|EIK51648.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri TS44]
Length = 416
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 24/237 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G+++ +A L+ +V+ V+ +Q+ +DP + ++ ++R+ + ++A+ G +
Sbjct: 108 GVISALAQYCLEHKLVDGVIQIQA-------SQTDPLENVA---TISRSRQNIIASSGSR 157
Query: 197 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGT 253
+ L V A ++ LF G C V A+R ++ H L YV+ C +
Sbjct: 158 YAPASPAQALKWV-AMSTEKYLFIGKPCDVAAVRQMQAHDPRLKQNIPYVVSFMCAGTPS 216
Query: 254 REGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDLVDVI 308
G ++ L E E V + + D K LK +G + Y L +
Sbjct: 217 LHGTEQVLDKLGVEREDVTSFRYRGDGWPGLTKATLK--NGDARTMTYNDSWGKVLNRHL 274
Query: 309 APSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEMLSLVK 362
C C D AD+V G+ G K Y I +R ++G+E+ K
Sbjct: 275 QTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEERDGNSLILIRTDKGRELFRNAK 331
>gi|150401466|ref|YP_001325232.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
aeolicus Nankai-3]
gi|150014169|gb|ABR56620.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus aeolicus Nankai-3]
Length = 282
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 32/193 (16%)
Query: 180 PVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR-SVEH--- 234
P +A T EE+L A G K T PNL+ L + G +++ G CQ+ A R S+++
Sbjct: 59 PKVATTVEEILEAAGTKYTTCPNLSVLKQAIREYGCEKVGVVGTPCQIIATRKSLKYPVG 118
Query: 235 --HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI- 291
H+N + +G C++N G+ ++ H D L G
Sbjct: 119 FRHMNDKIALTVGIFCMENFPYNGMKTIVEE---------HCGVKMDDVAKLDIGKGKFW 169
Query: 292 -----EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY 346
E L + IA C+ C DYT LAD+ G +G P G S
Sbjct: 170 TYTKWGETKSIKLADTHPYEQIA--CHVCTDYTAELADISTGSVGSPD--GWST------ 219
Query: 347 ITVRNERGKEMLS 359
+ R E+G+E L+
Sbjct: 220 VFARTEKGEEFLN 232
>gi|5931749|emb|CAB56640.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus tindarius]
Length = 342
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 108/261 (41%), Gaps = 31/261 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
Q G+ + +A +L+TG V+ +V + D ++ PE+V
Sbjct: 92 GQDGGVTSILAKALLETGTVDCIVGIAR------------DGAWGTELIVMTKPEDVDRT 139
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 252
G K T L+ L ++ GV CQ R + + N + + +LG C+++
Sbjct: 140 TGTKYTYDSVLSALR-EPFEKYDKIGVIGVPCQAHGARLLFENNNDKIVVILGLLCMESF 198
Query: 253 TREGLDKFL--KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 309
+ + + + + E V+ +F + + + K + H ++P A +
Sbjct: 199 YHDVMTEKIVPEVMGLNLEDVVKMDFGKGKFWNYTKDGEAHSVKIPEVAHYARN------ 252
Query: 310 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 369
C++C DYT+ AD+ +G +G P + +R + GK+M L+K+ +EI
Sbjct: 253 -PCHNCCDYTSVSADISLGSVGTP--------DGWNCVLIRTDVGKKMFELIKDKVEIME 303
Query: 370 TISSGDRRPFVMETVKADDNA 390
G + +K D+N+
Sbjct: 304 DPKPGMDLIKKLAKMKHDNNS 324
>gi|289192883|ref|YP_003458824.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
gi|288939333|gb|ADC70088.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
Length = 621
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 78 HVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTG 137
++++ C G+GM E V G+ + K L + + E+ YAR +EG Q G
Sbjct: 37 YIEEECLRKGNGMC-FEVCPRVSSGKYQIK--LRENF---KEKYYYARSD--IEG-QDGG 87
Query: 138 IVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKP 197
+VT +L++G ++ + V D+ P ++ + +++L K
Sbjct: 88 VVTAFLKYLLESGKIDGAIVVGK------------DEFWKPVSMIVLSEKDILKGSKSKY 135
Query: 198 TLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH----------------LNLEKL 241
T+S L+ L G++++ G+ CQ+ LR +++ + L K+
Sbjct: 136 TVS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYHAKHDPELGRDGKPVKLPKI 194
Query: 242 -YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 300
Y++G C++ L + L + + V ++ + L +++G +E+
Sbjct: 195 EYLIGLFCMEKFEYNSLKEVLSKYGIDIKDVEKFDIKKGN--LLVYVNGEKKEI------ 246
Query: 301 ANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 359
DL ++ I C C D+ LAD+ +G +G P G S I +R ++G+E
Sbjct: 247 --DLKEIEICSGCKMCRDFDAELADVSIGSVGSP--DGYST------IIIRTKKGEE--- 293
Query: 360 LVKNLLEITPTI 371
+KN +E+ +
Sbjct: 294 -IKNAVELKEGV 304
>gi|147668790|ref|YP_001213608.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Dehalococcoides sp. BAV1]
gi|146269738|gb|ABQ16730.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Dehalococcoides sp. BAV1]
Length = 428
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 20/200 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G+ T + L+TG+++ + ++P L+P +ARTPEE+ A G K
Sbjct: 109 GVATALLNYALETGLIDGAL----------VSGANPSSPLTPASFIARTPEELKQAAGSK 158
Query: 197 PTLSPNLNTLALVE-AAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV---LGTNCVDNG 252
P A+ E A R G+ C +QA+R E+ L K + LG C
Sbjct: 159 --YCPVAAASAISEITAKPGRYAVVGLPCHIQAIRKAENQNPLLKERIVLHLGIVCSSTM 216
Query: 253 TREGLDKFLKAASSEPETV--LHYEF-MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 309
+ G + LK + LHY +HL+ G + +P +
Sbjct: 217 SFRGTEYILKQQGINKINLISLHYRTGGWPGDMHLEMACGDTQTLPLRNYHPYHGHGFFS 276
Query: 310 P-SCYSCFDYTNALADLVVG 328
P C C D N LAD+ +G
Sbjct: 277 PRRCLMCTDQLNELADISLG 296
>gi|374300218|ref|YP_005051857.1| coenzyme F420 hydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332553154|gb|EGJ50198.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfovibrio africanus str. Walvis Bay]
Length = 370
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 62/268 (23%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
+G L +AR P A G VT + + +L T + + +
Sbjct: 86 MGAVRNLTFARAKAPEVTCMASHGGAVTALLLHLLDTKQIFGAIV-------------NR 132
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLS--PNL-----NTLALVEAAG------VKRLLF 219
+ + +PVLA++ +++L + G P +S P L TL++ E AG + ++ F
Sbjct: 133 REGIHRKPVLAKSAKDLLLSAGHYPAVSNGPALLGELYQTLSVRECAGSLAQGWLHKVAF 192
Query: 220 CGVGCQVQALRSVEHHLNLEKLYVLGTNCV--------DNGTREGLDKFLK---AASSEP 268
G+ Q+ ALR N+E L ++ ++ + D + G+ + L+ A
Sbjct: 193 VGLPDQILALR------NMETLGIIPSDAIALYVGLFCDGAYQLGITEQLRLEQAGKFNW 246
Query: 269 ETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA-PSCYSCFDYTNALADLVV 327
E +L + ++ K+HL DG + P L + C +C DY+ LAD+
Sbjct: 247 ENILRFTCAEELKIHLD--DGRV------VTPPEKLRKKLGMKGCSACTDYSAELADISF 298
Query: 328 GYMGVPKYTGISMTQHPQYITVRNERGK 355
G G+ + + VR ERG+
Sbjct: 299 G--------GLGASDGWTTVVVRTERGQ 318
>gi|298676011|ref|YP_003727761.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298288999|gb|ADI74965.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalobium evestigatum Z-7303]
Length = 341
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSP 178
++ AR + P Q G+ + I +L G ++ VV + ++
Sbjct: 80 KQFFGARSSIP---GQDGGVTSAILKSLLDKGEIDCVVGITR------------NENWET 124
Query: 179 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 238
VL P +V G K T ++ L R+ GV CQ R + ++N
Sbjct: 125 ELVLMTEPSQVDQTAGTKYTYDSVISALRE-PFKDYDRIAVVGVPCQAHGARLIFENIND 183
Query: 239 EKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVP 295
+ ++G C+++ E + D K + E V+ +F + + + K +GH ++P
Sbjct: 184 KIAVIIGLFCMESFHHETMLNDIIPKVLGLDIEQVVKMDFAKGKFWAYTKDGEGHSVKIP 243
Query: 296 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
A + C++C DYT AD+ +G +G P
Sbjct: 244 TVAEYARN-------PCHNCCDYTAVHADISIGSVGAP 274
>gi|339494474|ref|YP_004714767.1| hypothetical protein PSTAB_2397 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386021203|ref|YP_005939227.1| hypothetical protein PSTAA_2604 [Pseudomonas stutzeri DSM 4166]
gi|327481175|gb|AEA84485.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
gi|338801846|gb|AEJ05678.1| hypothetical protein PSTAB_2397 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 416
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 102/247 (41%), Gaps = 24/247 (9%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YA + + G+++ +A L+ +V+ V+ +Q+ ++DP + ++ +
Sbjct: 94 YATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQA-------SHTDPLENVA---TI 143
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLE 239
+R+ + ++A+ G + + L V A ++ LF G C V A+R ++ H L
Sbjct: 144 SRSRQNIIASSGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHDPRLKEN 202
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEV 294
Y++ C + +G ++ L E + V + + D K LK +G +
Sbjct: 203 IPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYRGDGWPGLTKATLK--NGDERTM 260
Query: 295 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRN 351
Y L + C C D AD+V G+ G K Y + I VR
Sbjct: 261 TYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT 320
Query: 352 ERGKEML 358
+G+E+
Sbjct: 321 AKGRELF 327
>gi|374635603|ref|ZP_09707198.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanotorris formicicus Mc-S-70]
gi|373561669|gb|EHP87898.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanotorris formicicus Mc-S-70]
Length = 356
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 50/258 (19%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
+G + E+ A+ ++ AQ G VT I L G+++ + V +D
Sbjct: 96 IGKYIEIFGAKSKMDIKYAQSGGAVTAILCNALDEGLIDGAIVVS-------------ED 142
Query: 175 R--LSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQA 228
R + P+ VL T EE++ G + + P L AL EA VK+L G C + A
Sbjct: 143 RWTMEPKSVLVTTKEELIKVAGSRYNWNVPILE--ALKEAVMVKKLEKLAIVGTPCVINA 200
Query: 229 -----------LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 277
L+ + + L+ +G C + L +K P + E
Sbjct: 201 VFQILASDNDLLKPFKKAIRLK----IGLFCTETFKYSELTAKIKDMGINPWEIKKMEIR 256
Query: 278 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 337
+ K+ + L+G +E+ ++ I C C D+T +D+ G +G P+ G
Sbjct: 257 KG-KLAIDLLNGETKEISL-----KEIEHCIRKGCSICRDFTALASDISAGNVGTPE--G 308
Query: 338 ISMTQHPQYITVRNERGK 355
++ + VRNE GK
Sbjct: 309 VTT------LIVRNEWGK 320
>gi|333910248|ref|YP_004483981.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333750837|gb|AEF95916.1| Coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
Length = 258
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 22/201 (10%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
Q G VT + LK G+++AVV V + + P P +A PE++L A
Sbjct: 12 GQDGGFVTALTTYCLKEGILDAVVVVGA-------------NNWKPYPFIATKPEDILKA 58
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 252
K ++SPN N L + GV CQ+ + + +G C N
Sbjct: 59 SKSKYSISPN-NKLLEYATENYDNVGLVGVPCQILGGNKFDLKMK------IGLFCTKNF 111
Query: 253 TREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFC-LPANDLVDVIAP 310
+ + + + V + + + V ++ I++ +P ++ P
Sbjct: 112 PYDAIKNIVDGLGIPIDRVEKMDIKKGKFIVKTSEIENLIKKKEMVKEIPIKEIEKFANP 171
Query: 311 SCYSCFDYTNALADLVVGYMG 331
+C C D++ AD+ VG +G
Sbjct: 172 ACRLCCDFSAEYADISVGSVG 192
>gi|410672139|ref|YP_006924510.1| formate dehydrogenase like protein, beta chain [Methanolobus
psychrophilus R15]
gi|409171267|gb|AFV25142.1| formate dehydrogenase like protein, beta chain [Methanolobus
psychrophilus R15]
Length = 383
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 52/273 (19%)
Query: 115 LGVHEELL-YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
+G+ ++LL YA G+VT + L+ GMVE VV ++ +
Sbjct: 2 VGIGDKLLGYATNPDVRNRGASGGLVTAVLAAALEKGMVEGVVVLKRI------------ 49
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL--RS 231
D PV+ +EVLA+ G + NL A+ +++ G C V+ + ++
Sbjct: 50 DEYEAIPVITDDVQEVLASGGSMHAVPVNLAKYAV-----GRKIAMPGKPCDVRGVIEQA 104
Query: 232 VEHHLNLEKLYVLGTNCVDNG----TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
+ + LE Y++G NC TRE L + + +PE V+ E ++ K+ K
Sbjct: 105 KRNGVELEDTYIVGLNCGGAMHPVVTREMLTRMYEI---DPEDVVGEE-IEKGKLIFKTK 160
Query: 288 DG--------HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
DG +EE Y +C C ADL G GV S
Sbjct: 161 DGEEKAISIDELEEAGYG----------RRENCRYCTIKIPTNADLACGNWGVIGELAGS 210
Query: 340 MTQHPQYITVRNERGKEML--SLVKNLLEITPT 370
T + V NE+GK +L ++ +E+ P
Sbjct: 211 AT----FCEVMNEKGKRLLDNAIEAGFIEVQPA 239
>gi|15669061|ref|NP_247865.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
jannaschii DSM 2661]
gi|2496134|sp|Q58280.1|Y870_METJA RecName: Full=Uncharacterized protein MJ0870
gi|1591554|gb|AAB98876.1| coenzyme F420-reducing hydrogenase, beta subunit (frhB)
[Methanocaldococcus jannaschii DSM 2661]
Length = 620
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 57/273 (20%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
+E+ YA+ +EG Q G+VT +L+ G ++ + V D+
Sbjct: 71 YEKYYYAKSD--IEG-QDGGVVTAFLKYLLENGKIDGAIVV-------------GDECWK 114
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---- 233
P ++ + E++L K +S L+ L G++++ G+ CQ+ LR ++
Sbjct: 115 PVSLVVQNAEDLLKTAKSKYAIS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPY 173
Query: 234 ---HHLNLEK----------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
H L L + Y++G C + + + + L + E V ++ +
Sbjct: 174 HAKHDLELGRNGKPVKLPKIEYLIGLFCTEKFRYDNMKEVLSKHGIDIEKVEKFDIKKGK 233
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 339
L +++G +E DL + I C C D+ +AD+ VG +G P G S
Sbjct: 234 --LLVYVNGEKKEF--------DLKEFEICSGCKMCRDFDAEMADVSVGCVGSP--DGYS 281
Query: 340 MTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 372
I +R E+G+E +KN +E+ ++
Sbjct: 282 T------IIIRTEKGEE----IKNAVELKEGVN 304
>gi|168481383|gb|ACA24866.1| WffB [Shigella dysenteriae]
gi|168481398|gb|ACA24880.1| WffB [Escherichia coli]
Length = 393
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 40/309 (12%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G++T IA+ ++ +G+V+A++ V V D+ + + ++ E++L G +
Sbjct: 91 GVLTAIAVYLVDSGLVDAIIQVGVSV----------DNPIRNVTYIMKSQEDILKCAGSR 140
Query: 197 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV---EHHLNLEKLYVLGTNCVDNGT 253
+ S L+ + + G R G C + A+R++ + Y+L C +
Sbjct: 141 YSPSSPLSVIRSLLGNGT-RYAVIGKPCDIAAMRTLVNSRQEFQEQFPYLLSFMCAGVPS 199
Query: 254 REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL---DGHIEEVPYFCLPANDLVDVIAP 310
EG L+ + E ++ + + D L DG + Y L + P
Sbjct: 200 EEGTRNILERWHIKHEHLISFRYRGDGWPGLTKAITDDGEEFTMTYNESWGGVLNRYLQP 259
Query: 311 SCYSCFDYTNALADLVVG---YMGVPKYTGISMTQHPQYITVRNERGKEMLSLV--KNLL 365
C C D AD+V Y Y + R +G+++L L KN++
Sbjct: 260 RCKLCADGIGEAADIVCADAWYSTTNGYPSFIEKEGRSLTIARTLKGRQLLDLALNKNVI 319
Query: 366 EITP-TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 424
+TP IS +E ++ P Q K N+ + + L+G F
Sbjct: 320 SLTPFNISD-------LEKIQ----------PYQANRKQTANVRRWAVMLLGGSVPNFKG 362
Query: 425 YSLDYHTIR 433
YSL+ R
Sbjct: 363 YSLNKLMFR 371
>gi|441168662|ref|ZP_20969062.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440615567|gb|ELQ78752.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 416
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPV--EGAQWTGIVTTIAIEMLKTGM-VEAVVCVQSLV 162
R + D+ + GV EE++ PV E + G +T +L+T M V V V S+
Sbjct: 77 RTRTPDERWTGVFEEVVAGHALDPVVYEASASGGSLTA----LLQTAMRVLGVTAVLSM- 131
Query: 163 ILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCG 221
D P + R P E++ L+P L L ++ R+ G
Sbjct: 132 ------GRDAGQPWRAAPAVVRDPGELVETAQSTYQLAPYLGALRRIMTEEPDARVAMSG 185
Query: 222 VGCQVQALRSVEH------HLNLEKLYVLGTNCVDNGTR-EGLDKFLKAASSEP-ETVLH 273
V C +QA+R ++ EK+ +L + TR EG ++ + P E+V+
Sbjct: 186 VACHIQAMRKLQAMDTEIGRWAREKVVLLVEPACSSSTRPEGTAAVIRERARVPVESVVR 245
Query: 274 YEFMQ-DY--KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYM 330
+ + +Y + ++ DG +V F D C SC D+ + LAD+ V
Sbjct: 246 LRYREGEYPGNIGIRTRDGVDHQV-QFWQAVRDFAGNKTHRCLSCGDWMSGLADVSVSD- 303
Query: 331 GVPKYTGISMTQHPQ----YITVRNERGKEMLS 359
G P S++ Q + +R G E ++
Sbjct: 304 GDPNIFAASVSGEGQAKHGRVFIRTRAGAEAVA 336
>gi|224368475|ref|YP_002602638.1| coenzyme F420-reducing hydrogenase [Desulfobacterium autotrophicum
HRM2]
gi|223691191|gb|ACN14474.1| coenzyme F420-reducing hydrogenase [Desulfobacterium autotrophicum
HRM2]
Length = 371
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 88/231 (38%), Gaps = 47/231 (20%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G++T + + +TG + V +++ P LA + EE+L A G
Sbjct: 105 GVITALLAHLFETGKINGAVVSRNM-------------ETGRTPWLATSKEEILDAAGSH 151
Query: 197 --------------PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK-- 240
T SP++ L + G++R+ F G CQ+ +R ++ +
Sbjct: 152 FNLSQGMETFGERYSTFSPSIKALGEIRREGLERIAFVGTPCQINTIRRMQALGVVPADS 211
Query: 241 -LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH------LDGHIEE 293
+ LG C N T K E+ +++ K+++K G I E
Sbjct: 212 IVLCLGLFCSGNFT------LTKENFHALESKYQFDYHDIEKINIKENFILRLATGEIRE 265
Query: 294 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
+P ++L + +C C D++ AD+ G +G +T+ P
Sbjct: 266 IPI-----SELDPLKRTACRYCKDFSAEFADISFGGIGADDGYTTVITRTP 311
>gi|261402870|ref|YP_003247094.1| nitrite and sulfite reductase 4Fe-4S region [Methanocaldococcus
vulcanius M7]
gi|261369863|gb|ACX72612.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
vulcanius M7]
Length = 617
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 148/380 (38%), Gaps = 87/380 (22%)
Query: 63 DHCSRCGLCDTYYIAHV---------KDACAFLGDGMSRIEGLETVVHGRGR---RKDSL 110
+ C+RCG C ++ KD C G+GM E V G+ + R++
Sbjct: 13 NMCARCGTCTVVCPNNLLTFEDRPKLKDECLRKGNGMC-FEVCPRVSSGKYQIKIRENFF 71
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNS 170
+ Y G E +EG Q G+VT +L+ G ++ + V
Sbjct: 72 EKYYYGKSE----------IEG-QDGGVVTAFLKYLLENGKIDGAIVV------------ 108
Query: 171 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
D+ P + + +++L + K +S L+ L G++++ G+ CQ+ LR
Sbjct: 109 -GDECWKPISMAVQNADDLLKSTKSKYAVS-TLDALRKAGEMGLEKVAVVGLPCQINGLR 166
Query: 231 SVEHHLNLEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLH 273
+++ L K Y++G C++ + + + L+ + E V
Sbjct: 167 KLQYFPYLAKHDFELGRDGKPVKLPKIEYLIGLFCMEKFKYDNMKEVLERHGIKIEDVKK 226
Query: 274 YEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 332
++ + V+L++ I+ + + C C D+ +AD+ VG +G
Sbjct: 227 FDIKKGKLIVYLENDKKEIKLEEF----------EVCSGCNICRDFDAGMADVSVGCVGS 276
Query: 333 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKM 392
P G S I +R ++G+E +KN +E+ + +E + N K+
Sbjct: 277 P--DGYST------IIIRTKKGEE----IKNAIELKEGVD--------VEAINKLRNKKL 316
Query: 393 GRGPSQ-PAPKFVGNLIAFF 411
R + K G I+F+
Sbjct: 317 KRFKKEVERRKETGEYISFY 336
>gi|379011201|ref|YP_005269013.1| F420 reducing hydrogenase subunit beta [Acetobacterium woodii DSM
1030]
gi|375301990|gb|AFA48124.1| F420 reducing hydrogenase subunit beta [Acetobacterium woodii DSM
1030]
Length = 390
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 129/319 (40%), Gaps = 44/319 (13%)
Query: 63 DHCSRCGLCDTYYIAHVKDA-CAFLGDGMSRIEGLE---TVVHGRGRRKDSLDDTYLGVH 118
++C+ CGLC + +D F + E LE + G DDT G +
Sbjct: 8 EYCTGCGLCHSVNDTRFQDEPNGFTYPVIENNEQLEFNSKICQANGTHLLKQDDTTWGHY 67
Query: 119 EELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRL 176
+ Y+ T+ A G+ T +A+ + + G+V+ V+ V DPD
Sbjct: 68 FNVYSGYSTDTEIRFKAASGGMTTAVAVYLAERGLVDGVIQV----------GEDPDSPY 117
Query: 177 SPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS-VEHH 235
+ +++T EE+++ G + +S L L V + G K + G C + L + ++++
Sbjct: 118 GTKNFVSKTKEEIVSHCGSRYIVSSPLANLQQVLSNGGKYAVI-GRPCDIVVLNNYLDNY 176
Query: 236 LNL-EKLY-VLGTNCVDNGTREGLDKFLKAASSEPETV--LHYE----------FMQDYK 281
E +Y L C + + E K K EPE+V + Y F +D +
Sbjct: 177 PQFKENIYCTLTFFCAGSPSVEASKKLAKRLEIEPESVTKIRYRGYGWPGKATVFSEDKE 236
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG--YMGVPKYTGIS 339
H++++D + + D+ + C C D AD+ G + +
Sbjct: 237 NHMEYIDSWNQ------ILGRDIRKI----CKLCTDGVGEAADIASGDLWNLADNKPVFN 286
Query: 340 MTQHPQYITVRNERGKEML 358
T + R+E+G+++L
Sbjct: 287 ETDGVNVVFARSEKGRKIL 305
>gi|336476127|ref|YP_004615268.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929508|gb|AEH60049.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 45/271 (16%)
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
VVHG L+D + V + A+ P Q G+ + I + + ++ VV +
Sbjct: 67 VVHGY------LEDEFANV-KRFFAAKSDIP---GQDGGVTSAILKSLFEKNEIDCVVGI 116
Query: 159 QSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLL 218
D+ +L PE+V G K T ++ L R+
Sbjct: 117 SR------------DENWQTELILMTKPEDVDKTTGTKYTYDSVVSALRE-PFEKFDRIA 163
Query: 219 FCGVGCQVQALRSVEHHLNLEKLYVLGTNCV-----DNGTREGLDKFLKAASSEPETVLH 273
GV CQ+ R + ++N + + ++G C+ D T E + + L + SE V+
Sbjct: 164 VVGVPCQIHGSRLIMDNINDKIVLLVGLFCMESFYHDVMTEEIIPEKLGLSISE---VIK 220
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+F + K DG VP +P ++ + C++C DYT AD+ VG +G P
Sbjct: 221 LDFAKG-KFWAYTRDGESHNVP---IP--EIAPLARDPCHACCDYTAIYADISVGSVGAP 274
Query: 334 KYTGISMTQHPQYITVRNERGKEMLSLVKNL 364
+ +R E G+ +V+ L
Sbjct: 275 --------DGWNSVLIRTEAGERYFDMVEGL 297
>gi|257052402|ref|YP_003130235.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhabdus utahensis DSM 12940]
gi|256691165|gb|ACV11502.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhabdus utahensis DSM 12940]
Length = 498
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 53/260 (20%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVL 190
E AQ G+VT++ +L+ G ++ +++ + DP LA +PEE +
Sbjct: 211 ENAQDGGLVTSVLCHLLEAGEIDGA-------LIATESDEDP---WKAEAFLATSPEECI 260
Query: 191 AAKGVKPTLSPNLNTL----------ALVEAAGVKRLLFCGVGCQVQALRSVE------- 233
G T + L L L+E A L G C+++ +R+++
Sbjct: 261 ENAGSIYTQTMALGNLDLQQWDHKIDGLIEDA---SLALVGTPCEIEGIRALQDFEWEYG 317
Query: 234 -HHLNLEKL-YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDG 289
H + + Y + C N E L ++ ++ + + V + + D K+ + DG
Sbjct: 318 SHEEGVRAIDYAIALMCTKNFNYERLMGEQLVEQRDIDLDNVGKMDVL-DGKMMVYDRDG 376
Query: 290 HI---EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY 346
+ E+V F D C C D+T ADL VG +G +
Sbjct: 377 ELIVDEDVENF-------HDAALKGCDECADFTGYCADLTVGSVG--------SSDEYSS 421
Query: 347 ITVRNERGKEMLSLVKNLLE 366
+ VR E G + +L K+ L+
Sbjct: 422 VIVRTEAGLDAWNLTKDDLD 441
>gi|298674635|ref|YP_003726385.1| nitrite and sulfite reductase [Methanohalobium evestigatum Z-7303]
gi|298287623|gb|ADI73589.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalobium
evestigatum Z-7303]
Length = 623
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 131/355 (36%), Gaps = 77/355 (21%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLC---------DTYYIAHVKDACAFLGDGMSRIEG 95
+W+ + + + G C+RCG C D +KD C G GM
Sbjct: 3 EWKLKDEIVDNG-------MCARCGTCAVVCPNDLLDFKNGPVLKDECLRKGHGMC---- 51
Query: 96 LETVVH-GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
LE G+ + S+ + + EE R Q G+VT +L +E
Sbjct: 52 LEVCPRVSSGKYQISIRENF---KEEYYAGRGNFD---GQDGGVVTAFLKYLLDNEKIEG 105
Query: 155 VVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV 214
+ V D+ P ++ + + ++ K T+S L+ L G+
Sbjct: 106 AIVV-------------GDECWKPVSMVVKDEKGLMDTAKSKYTIS-TLDALRDAGEMGL 151
Query: 215 KRLLFCGVGCQVQALRSVEHHLNLEK-----------------LYVLGTNCVDNGTREGL 257
+ + G+ CQ+ LR +++ L K Y++G C + + L
Sbjct: 152 ENVAVVGLPCQINGLRKLQYFEYLAKHGEELGSNGKPANLPDIQYLIGLFCTEKFEYDSL 211
Query: 258 DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFD 317
L+ + + E V ++ ++ V + ++P D +D I P C C D
Sbjct: 212 KNILQKYNVDIENVEKFDILKGKLVAYSNKKNASVKIPL------DEID-ITPGCRVCRD 264
Query: 318 YTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 372
+ +AD+ VG G + + VR E+G + +KN +E+ I+
Sbjct: 265 FDANMADVSVGSAG--------SSDGYSTVVVRTEKGDD----IKNAIELHDEIN 307
>gi|336121589|ref|YP_004576364.1| Coenzyme F420 hydrogenase [Methanothermococcus okinawensis IH1]
gi|334856110|gb|AEH06586.1| Coenzyme F420 hydrogenase [Methanothermococcus okinawensis IH1]
Length = 359
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 40/253 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG E L A+ V+ Q G+VT I G+++ +LV++ +
Sbjct: 97 LGRILEKLKAKSKIEVKNPQSGGVVTAILANAFDEGIIDG-----ALVMMEDKWT----- 146
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVK---RLLFCGVGCQVQALR 230
+ P+ LA + +EVL A G + + P L AL EA VK R+ G C + A+
Sbjct: 147 -MEPKSYLATSKDEVLKASGSRYNWNVPILK--ALKEAVMVKKLNRIAVVGTPCVMNAVY 203
Query: 231 SV---EHHL-----NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 282
+ E+ L N +L + G C + + + + L+ + P V + ++ K+
Sbjct: 204 QIMASENDLLKPFKNAIRLKI-GLFCFETYDYDKMMEILEKHNINPWDVQKMD-IEKGKL 261
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
+K ++G+ E D+ + C C D+T +D+ VG +G P+ G S
Sbjct: 262 IVKLMNGNSIE-----FKLKDVEHAMRAGCKVCGDFTGIASDISVGNVGTPE--GYST-- 312
Query: 343 HPQYITVRNERGK 355
+ VRNE GK
Sbjct: 313 ----VLVRNEWGK 321
>gi|452203057|ref|YP_007483190.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Dehalococcoides mccartyi
DCMB5]
gi|452110116|gb|AGG05848.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Dehalococcoides mccartyi
DCMB5]
Length = 428
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 20/200 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G+ T + L+TG+++ + ++P L+P +ARTPEE+ A G K
Sbjct: 109 GVATALLNYALETGLIDGALVS----------GANPSSPLTPASFIARTPEELKQAAGSK 158
Query: 197 PTLSPNLNTLALVE-AAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV---LGTNCVDNG 252
P A+ E A R G+ C +QA+R E+ L K + LG C
Sbjct: 159 --YCPVAAASAISEITAKPGRYAVVGLPCHIQAIRKAENQNPLLKERIVLHLGIVCSSTM 216
Query: 253 TREGLDKFLKAASSEPETV--LHYEF-MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 309
+ G + LK + LHY +HL+ G +P +
Sbjct: 217 SFRGTEYILKQQGINKINLISLHYRTGGWPGDMHLEMACGDTLTLPLRNYHPYHGHGFFS 276
Query: 310 P-SCYSCFDYTNALADLVVG 328
P C C D N LAD+ +G
Sbjct: 277 PRRCLMCTDQLNELADISLG 296
>gi|150401207|ref|YP_001324973.1| nitrite and sulfite reductase 4Fe-4S region [Methanococcus aeolicus
Nankai-3]
gi|150013910|gb|ABR56361.1| nitrite and sulphite reductase 4Fe-4S region [Methanococcus
aeolicus Nankai-3]
Length = 618
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 53/260 (20%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEV 189
+EG Q G+V+T +L+ ++ + V D+ P ++ + PE++
Sbjct: 81 IEG-QDGGVVSTFLKHLLENKKIDGAIVV-------------GDECWKPVSLIVQNPEDI 126
Query: 190 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL-------- 241
+ K +S L L G++++ G+ CQ+ LR +++ L K
Sbjct: 127 EKSAKSKYAVS-TLEALREAGEMGIEKVAVVGLPCQIAGLRKLQYFPYLAKYDGELGKNG 185
Query: 242 ---------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 292
Y++G C + + L + L + E V ++ + + I
Sbjct: 186 KLAKLPKIEYLIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLII-------IT 238
Query: 293 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 352
E + +P D+ + C C D+ +AD+ VG +G P G S +T+R E
Sbjct: 239 EDEEYKIPLKDIE--MNAGCKMCRDFDAEMADVSVGCVGSP--DGYST------VTIRTE 288
Query: 353 RGKEMLSLVKNLLEITPTIS 372
+G+E +KN +E+ +
Sbjct: 289 KGEE----IKNAVELNEGVE 304
>gi|73668206|ref|YP_304221.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina barkeri str.
Fusaro]
gi|72395368|gb|AAZ69641.1| coenzyme F420 hydrogenase beta subunit [Methanosarcina barkeri str.
Fusaro]
Length = 344
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 92/240 (38%), Gaps = 31/240 (12%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILS 165
R + + LG + E+ + + Q G VT I L TG+V+AVV V
Sbjct: 74 RLEEQPSSLLGDYLEITAGKAEFDIPKKQSGGAVTAILANALDTGLVDAVVTV------- 126
Query: 166 YYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGV 222
DP L P ++ E ++ G + L +L EA + + GV
Sbjct: 127 ---TEDPW-TLKPHSMVITKSEALVGQAGSRYNWWVPL-VYSLKEAVVNRKYRNIAVVGV 181
Query: 223 GCQVQALRSVEHHLNL-------EKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLH 273
C VQA+R + N +V+G C ++ E L K + EP V
Sbjct: 182 PCVVQAVRKMLETDNQLVGPYKKSIRFVMGLFCTESFDYEKLIAGKLKSEYALEPMKVCR 241
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
+ ++ L DG + +P +L D P C C D+T AD+ G +G P
Sbjct: 242 IDVKGKLEITLD--DGT-----QYVIPLTELEDTTRPGCSVCTDFTALKADISAGSVGSP 294
>gi|298675109|ref|YP_003726859.1| nitrite and sulfite reductase [Methanohalobium evestigatum Z-7303]
gi|298288097|gb|ADI74063.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalobium
evestigatum Z-7303]
Length = 644
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 110/288 (38%), Gaps = 51/288 (17%)
Query: 113 TYLGVHEELLYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNS 170
+ +G E + AR T Q G VT + G+++ V
Sbjct: 82 SLIGQFERVTSARATNSTIRNKGQDGGAVTALLDYCFDNGLIDGAV-------------- 127
Query: 171 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
+ D P + EE+ ++G K + P ++ L V ++ + G+ CQV R
Sbjct: 128 NTADFTKPSSRIVTNKEELQESQGSKYSALPVMSALRQVNDE-LENVAMVGLPCQVYGTR 186
Query: 231 SVEHH--LNLEKL---------------YVLGTNCVDNGTREGLDKFLKAASSEPETVLH 273
+ LN+ L YV+G C++N + L +L++ + +
Sbjct: 187 RTQFFKGLNVHPLEIGTDGEKANIPNIPYVIGLFCMENFNYDKLSGYLESIGIDLSKIKK 246
Query: 274 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
Y D + + +G++E + D+ D + C+ C D + +AD+ G++G
Sbjct: 247 YAIRLDEMIIMTD-EGNVE------ISLKDIEDYVWDGCHICRDAVSKVADISAGHVG-- 297
Query: 334 KYTGISMTQHPQYITVRNERGKEMLSLVK--NLLEITPTISSGDRRPF 379
TG + + RN +G E+L + LE + + D F
Sbjct: 298 SSTGWTT------LIARNAKGLELLEAAEKDGYLETSDKVDVEDIEDF 339
>gi|452747770|ref|ZP_21947562.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri NF13]
gi|452008333|gb|EME00574.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri NF13]
Length = 416
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 24/247 (9%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YA + + G+++ +A L+ +V+ V+ +Q+ +DP + ++ +
Sbjct: 94 YAADNEIRQAGSSGGVISALAQYCLENKLVDGVIQIQA-------SQTDPLENVA---TI 143
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLE 239
+R+ + V+A+ G + + L V A ++ LF G C V A+R ++ H L
Sbjct: 144 SRSRQNVIASSGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHNPRLKEN 202
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEV 294
Y++ C + +G ++ L + V + + D K LK +G +
Sbjct: 203 IPYIVSFMCAGTPSLQGTEQVLDKLEVKRSDVTAFRYRGDGWPGLTKATLK--NGDERTM 260
Query: 295 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRN 351
Y L + C C D AD+V G+ G K Y + I VR
Sbjct: 261 TYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT 320
Query: 352 ERGKEML 358
+G+E+
Sbjct: 321 AKGRELF 327
>gi|392421702|ref|YP_006458306.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri CCUG
29243]
gi|390983890|gb|AFM33883.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri CCUG
29243]
Length = 416
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 24/247 (9%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YA + + G+++ +A L+ +V+ V+ +Q+ +DP + ++ +
Sbjct: 94 YAADNEIRQAGSSGGVISALAQYCLENKLVDGVIQIQA-------SQTDPLENVA---TI 143
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLE 239
+R+ + V+A+ G + + L V A ++ LF G C V A+R ++ H L
Sbjct: 144 SRSRQNVIASSGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHNPRLKEN 202
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEV 294
Y++ C + +G ++ L + V + + D K LK +G +
Sbjct: 203 IPYIVSFMCAGTPSLQGTEQVLDKLEVKRSDVTAFRYRGDGWPGLTKATLK--NGDERTM 260
Query: 295 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRN 351
Y L + C C D AD+V G+ G K Y + I VR
Sbjct: 261 TYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT 320
Query: 352 ERGKEML 358
+G+E+
Sbjct: 321 AKGRELF 327
>gi|88602076|ref|YP_502254.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
gi|88187538|gb|ABD40535.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
Length = 337
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG + + AR T + Q G VT I + G+++ V+ V +D
Sbjct: 79 LGNYLSCIGARATTEISNKQSGGAVTAILADAFSKGLIDGVITVT-------------ED 125
Query: 175 RLSPRP--VLARTPEEVLAAKGVKPTLS-PNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 230
R + +P VL + E+L G + S P L L V + R+ G C +QA R
Sbjct: 126 RWTHKPISVLVTSAGEMLEHAGSRYNWSVPVLKALKTAVVTKKLTRIAIIGTPCVMQAAR 185
Query: 231 SVE---HHL----NLEKLYVLGTNCVDNGTREGL-DKFLKAASSEPETVLHYEFMQ---D 279
++ H L ++G C ++ L ++ LK + + YE ++
Sbjct: 186 LMKDSSHDLVRPFGKAIRLMVGLFCTESFNYYPLMEEILK----KNHNIQQYEIVRMDIK 241
Query: 280 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 334
K+ L DG+ E +P ++ I C SC D+T AD+ G +G P+
Sbjct: 242 GKLELTLSDGNTENIPL-----KEIESAIREGCKSCKDFTALDADISAGSVGTPE 291
>gi|94266514|ref|ZP_01290203.1| 4Fe-4S ferredoxin, iron-sulfur binding:Coenzyme F420
hydrogenase/dehydrogenase beta subunit-like [delta
proteobacterium MLMS-1]
gi|93452874|gb|EAT03391.1| 4Fe-4S ferredoxin, iron-sulfur binding:Coenzyme F420
hydrogenase/dehydrogenase beta subunit-like [delta
proteobacterium MLMS-1]
Length = 451
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 27/234 (11%)
Query: 187 EEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK---LYV 243
E++ +A+ K + P L+ L + +A V+R+ GV CQ+ L +++ + + Y
Sbjct: 144 EDLSSAQKSKYSPIPLLSALRQLPSA-VERVGLVGVACQMHGLYNLQDLIPAYRKLQFYK 202
Query: 244 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD--YKVHLKHLDGHIEEVPYFCLPA 301
+G C T +D K A +EP T L + Q Y + E+
Sbjct: 203 IGLICDRTMTAAAIDYMGKLAGNEPLTNLTWRDKQQPAYPGNPVVKTASGREITLQAAQR 262
Query: 302 NDLVDVIAP-SCYSCFDYTNALADLVV----GYMGVPKYTGISMTQHPQYITVRNERGKE 356
++ D P C CFD N ADL + G GV + G S+ + VR + G+
Sbjct: 263 MEIKDFFTPVRCRLCFDKLNVFADLTLGDPHGIKGVDRQGGESV------VLVRADTGRR 316
Query: 357 MLS-----LVKNLLEITPTISSGDRRPFVMETVKADDNAKM--GRGPSQPAPKF 403
+++ V +L EI P ++ ++ +E + A M G +P P+F
Sbjct: 317 LITDAVHQGVVSLREIAPEEATKGQK---IEQKRGQWAAAMEAWAGMGRPLPRF 367
>gi|212224712|ref|YP_002307948.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit [Thermococcus
onnurineus NA1]
gi|212009669|gb|ACJ17051.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit [Thermococcus
onnurineus NA1]
Length = 276
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 35/206 (16%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
G VT + L+ G+++ VV + + L + V+ART EE+L G K
Sbjct: 34 GAVTALLAYALEKGLIDGVV------------TAKRTEGLEGQAVVARTREELLETAGNK 81
Query: 197 PTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK------LYVLGTNCV 249
++ P + + A +E +K + + CQ Q + LE Y++ C+
Sbjct: 82 WSIVPFASRMKAKIEEEDLKNVAVVCLPCQAQFFGQMRDFPLLESDFGERIKYIVSLFCI 141
Query: 250 DNGTREGLDKFLKA-----ASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 304
E +L+ A + VL +F++ Y H D LP ++
Sbjct: 142 GTFAFEAFLNYLRMKHGIMAQDIKDIVLKGDFLEIY-----HGD------SVLSLPIKEV 190
Query: 305 VDVIAPSCYSCFDYTNALADLVVGYM 330
+ C C DYT +D+ G++
Sbjct: 191 YSYLQAGCLVCTDYTGTWSDISAGFV 216
>gi|432602590|ref|ZP_19838834.1| hypothetical protein A1U5_02433 [Escherichia coli KTE66]
gi|431141164|gb|ELE42929.1| hypothetical protein A1U5_02433 [Escherichia coli KTE66]
Length = 399
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 32/282 (11%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH--------GRG---RRKDSLDDT 113
C+ CGLC + Y + + A G R + +E V G G + DS ++
Sbjct: 12 CTGCGLCSSVYSKSI--SMALSEKGFLRPKVIEKSVLDIELPFCPGAGLYIEKHDSQNNI 69
Query: 114 YLGVHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSD 171
G L ++ ++ G+++ I I +L+ +V+ V+ + D
Sbjct: 70 LWGNINNCLVGFSSSSEVRYRGASGGVLSQIGIYLLENKLVDGVI----------HIGVD 119
Query: 172 PDDRLSPRPVLARTPEEVLAAKGVKPT-LSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
+D L +++T E++ G + + +P L ++ G K+ F G C V ALR
Sbjct: 120 SNDPLKNIIKVSKTKAEIVCNAGSRYSPAAPLEKILQIIGENGNKKYAFIGKPCDVAALR 179
Query: 231 ---SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-YKVHLKH 286
S H Y+ C + EG + L+ + E ++ + + D + K
Sbjct: 180 VFISNNKHYANNIPYIFSFMCAGTPSIEGTYEILRKFHIKKEDLISFRYRGDGWPGVTKA 239
Query: 287 LDGHIEE--VPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 326
+D H E + Y N L + C C D AD+V
Sbjct: 240 VDRHFGEKKMSYNESWGNILGKYLQKRCKICPDGIGEFADIV 281
>gi|150401725|ref|YP_001325491.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
aeolicus Nankai-3]
gi|150014428|gb|ABR56879.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus aeolicus Nankai-3]
Length = 357
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 134/335 (40%), Gaps = 70/335 (20%)
Query: 62 KDHCSRCGLC------DTYY------IAHVKDACAFLGDGMSRIEGLETVVHGRG----- 104
KD CS CG C D Y I + D CA + +S +E +E V
Sbjct: 14 KDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACI---ISPVEEIEYPVSAEFCKTTL 70
Query: 105 -------------RRKDSLDDTY---LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLK 148
R K+ + T +G + + A+ V+ AQ G+V+ I
Sbjct: 71 YDVPCGACYGACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFD 130
Query: 149 TGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLA 207
G+++ ++V++ + + P+ LA + EEVL + G + + P L L
Sbjct: 131 EGLIDG-----AIVMMEDKWT------MEPQSYLATSKEEVLKSAGSRYNWNVPILRALK 179
Query: 208 -LVEAAGVKRLLFCGVGCQVQALRSVEHHLN-LEKLYV------LGTNCVDNGTREGLDK 259
V +K++ G C + A+ + N L K + +G C + E + +
Sbjct: 180 DAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMME 239
Query: 260 FLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYT 319
+ + P V + ++ K+ +K DG EV F L +++ D + C C D++
Sbjct: 240 IFEKNNINPWDVRKMD-IEKGKLLIKLRDG---EVIKFKL--DEVEDAMRAGCKVCGDFS 293
Query: 320 NALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 354
+ADL VG +G P + I +RN+ G
Sbjct: 294 GIVADLSVGNVGAP--------SNYSTILIRNDWG 320
>gi|431926976|ref|YP_007240010.1| coenzyme F420-reducing hydrogenase subunit beta [Pseudomonas
stutzeri RCH2]
gi|431825263|gb|AGA86380.1| coenzyme F420-reducing hydrogenase, beta subunit [Pseudomonas
stutzeri RCH2]
Length = 416
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 24/247 (9%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
YA + + G+++ +A L+ +V+ V+ +Q+ +DP + ++ +
Sbjct: 94 YATDNEIRQAGSSGGVISALAQYCLENRLVDGVIQIQA-------SQTDPLENVA---TI 143
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLE 239
+R+ + ++A+ G + + L V A ++ LF G C V A+R ++ H L
Sbjct: 144 SRSRQNIIASSGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHNPRLKEN 202
Query: 240 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEV 294
+++ C + +G ++ L E V + + D K LK+ G +
Sbjct: 203 IPFIVSFMCAGTPSLQGTEQVLDKLEVERSDVTAFRYRGDGWPGLTKATLKN--GDERTM 260
Query: 295 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRN 351
Y L + C C D AD+V G+ G K Y + I VR
Sbjct: 261 TYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT 320
Query: 352 ERGKEML 358
+G+E+
Sbjct: 321 AKGRELF 327
>gi|222444627|ref|ZP_03607142.1| hypothetical protein METSMIALI_00239 [Methanobrevibacter smithii
DSM 2375]
gi|222434192|gb|EEE41357.1| 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2375]
Length = 359
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 215 KRLLFCGVGCQVQALRSV---EHHLNLEKLYV-LGTNCVDNGTREGLDKFLKAASSEPET 270
K+ G CQ+ A + E + V +G C++N + + L ++LK+ E
Sbjct: 4 KKTAMVGTPCQILAATKINRYEEKTGGSPIDVKIGLFCMENFSYQYLKRYLKSRDIELFE 63
Query: 271 VLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
V + + + +L +DG++ F +P + +C+ C DYT+ ++D+ VG
Sbjct: 64 VKEFRIEKGQFVAYL--IDGNV-----FKIPIAETEPFTRKNCHICTDYTSDVSDISVGS 116
Query: 330 MGVPKYTGISMTQHPQYITVRNERGKEML 358
+G PKY + VR+++GK+++
Sbjct: 117 VGSPKYHST--------VIVRSQKGKQII 137
>gi|57234998|ref|YP_180962.1| iron-sulfur cluster-binding protein/coenzyme F420-reducing
hydrogenase, beta subunit [Dehalococcoides ethenogenes
195]
gi|57225446|gb|AAW40503.1| iron-sulfur cluster-binding protein/coenzyme F420-reducing
hydrogenase, beta subunit, putative [Dehalococcoides
ethenogenes 195]
Length = 428
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 20/200 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GI TT+ L+TG+++ +LV ++ P L+P +ART EE+ A G K
Sbjct: 109 GIATTLLAYALETGLIDG-----ALVSIA-----PPFSPLTPTGFIARTAEELKQAAGSK 158
Query: 197 PTLSPNLNTLALVE-AAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNG 252
P A+ E AA R G+ C +QA+R E L + LG C
Sbjct: 159 --YCPVAANTAISEIAARPGRYAVAGLPCHIQAIRKAERQNPVLQERIVLHLGIVCSSTM 216
Query: 253 TREGLDKFLKAASSEPETVLHYEFMQD---YKVHLKHLDGHIEEVPYFCLPANDLVDVIA 309
+ +G + LK ++V + + + L+ G +P
Sbjct: 217 SFKGTEYILKKQGINKDSVTSLSYRTNGWPGNMRLETCGGTTLRLPLKAYHPYHGHGFFT 276
Query: 310 P-SCYSCFDYTNALADLVVG 328
P C C D N LAD+ +G
Sbjct: 277 PRRCLICNDQLNELADISLG 296
>gi|288932072|ref|YP_003436132.1| Coenzyme F420 hydrogenase [Ferroglobus placidus DSM 10642]
gi|288894320|gb|ADC65857.1| Coenzyme F420 hydrogenase [Ferroglobus placidus DSM 10642]
Length = 356
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 173 DDRLSPRPVLARTPEEVLAAK--GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 230
D+ P V R+ EE+ + G K + +P + L + ++ F G C + LR
Sbjct: 140 DEMFRPYVVHVRSAEELYDTRITGTKYSFAPVMPELHRI-IKRFDKIGFIGTPCMISGLR 198
Query: 231 SVEHHLNLEKLYV---LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKH 286
++ + L + V +G C +N L FLK+ ++ + + + + ++ V K
Sbjct: 199 KLQKKVPLYEKRVRLAVGLFCTENFYWHQLYDFLKSRGADLKNAVKTDITKGNFIVTFK- 257
Query: 287 LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 331
DG F +P ++ ++ C+ C D++ AD+ VG +G
Sbjct: 258 -DGS-----EFVIPVKEMEPIVPEGCHVCQDFSAVEADVSVGSVG 296
>gi|91774180|ref|YP_566872.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanococcoides burtonii DSM 6242]
gi|91713195|gb|ABE53122.1| Coenzyme F420 hydrogenase subunit beta [Methanococcoides burtonii
DSM 6242]
Length = 389
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 39/282 (13%)
Query: 65 CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
C+ CG C Y+ V + +G + V + + R + ++ +G
Sbjct: 75 CTLCGACVASCEYVTFVDNKPKLVGKCTAC-----GVCYNQCPRTITKEEDLIGKIRYAY 129
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVL 182
AR P Q G+VT++ L G+++ V + D+ PV+
Sbjct: 130 AARSAIPGVKGQDGGVVTSMLAYALDEGLLDCAVVTKR----------SKDEPWKAEPVI 179
Query: 183 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH------HL 236
RT EVL + G T S L L G+ + F G C + A+ ++ HL
Sbjct: 180 VRTSAEVLESAGSIYTHSMTLEPLMSAIKQGMGSIGFVGPSCNIDAVHKMQTSSYGFLHL 239
Query: 237 NLE-KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH-LKHLDGHIEEV 294
L ++ G C+D+ +G+ +F+++ M +H +K G E
Sbjct: 240 FLRARVLKFGLFCMDSFEHDGIKEFVESKG-----------MDLNDIHSMKIRKGLFELG 288
Query: 295 PYFCLPANDLVDV---IAPSCYSCFDYTNALADLVVGYMGVP 333
+ + DL ++ SC C D + D+ G +G P
Sbjct: 289 TSEGMKSYDLSELDQYRCSSCKYCTDMVSENTDISFGGVGTP 330
>gi|333986356|ref|YP_004518963.1| Formate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333824500|gb|AEG17162.1| Formate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 399
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 51/276 (18%)
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
++ YA+ + E ++ G VTT+ +L G+V+AV+ V+ SD D +
Sbjct: 6 DMFYAKSSDAEIAEAGEYGGAVTTLLKFLLSEGIVDAVLAVEE--------GSDLYDAV- 56
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---- 233
P+L PE+V+ A G + NL + G + + A+ VE
Sbjct: 57 --PILIEDPEKVVGAAGSLHFGTLNLAKVVTRYLNGAQDMKIAVTVKPCDAMTMVELMKR 114
Query: 234 HHLNLEKLYVLGTNCVDNGT------REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
+N + + ++G NC GT R+ ++KF + +P++V+ E + K+ ++
Sbjct: 115 EKVNADNVIMVGLNC--GGTMPPVKGRQMMEKFYEV---DPDSVVKEEIAKG-KLIVETE 168
Query: 288 DGHIEEVPYFCLPANDLVDVIA-------PSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
DG +E+P +DV+ +C C +ADL G GV +
Sbjct: 169 DGTEKEIP---------IDVLEDEGFGRRTNCRRCEVNIPRMADLACGNWGVIG----PL 215
Query: 341 TQHPQYITVRNERGKEMLSLVKN--LLEITPTISSG 374
+I V + +G E+L K +L++ I G
Sbjct: 216 AGKATFIEVCSPKGAEVLEKAKEAGVLDLEAPIPKG 251
>gi|148642195|ref|YP_001272708.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanobrevibacter smithii ATCC 35061]
gi|148551212|gb|ABQ86340.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanobrevibacter smithii ATCC 35061]
Length = 359
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 215 KRLLFCGVGCQVQALRSV---EHHLNLEKLYV-LGTNCVDNGTREGLDKFLKAASSEPET 270
K+ G CQ+ A + E + V +G C++N + + L ++LK+ E
Sbjct: 4 KKTAMVGTPCQILAATKINRYEEKTGGSPIDVKIGLFCMENFSYQYLKRYLKSRDIELFE 63
Query: 271 VLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
V + + + +L +DG++ F +P + +C+ C DYT+ ++D+ VG
Sbjct: 64 VKEFRIEKGQFVAYL--IDGNV-----FKIPIAETEPFTRKNCHICTDYTSDVSDISVGS 116
Query: 330 MGVPKYTGISMTQHPQYITVRNERGKEML 358
+G PKY + VR+++GK+++
Sbjct: 117 VGSPKYHST--------VIVRSQKGKQII 137
>gi|261350833|ref|ZP_05976250.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Methanobrevibacter smithii DSM 2374]
gi|288860451|gb|EFC92749.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Methanobrevibacter smithii DSM 2374]
Length = 359
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 215 KRLLFCGVGCQVQALRSV---EHHLNLEKLYV-LGTNCVDNGTREGLDKFLKAASSEPET 270
K+ G CQ+ A + E + V +G C++N + + L ++LK+ E
Sbjct: 4 KKTAMVGTPCQILAATKINRYEEKTGGSPIDVKIGLFCMENFSYQYLKRYLKSRDIELFE 63
Query: 271 VLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 329
V + + + +L +DG++ F +P + +C+ C DYT+ ++D+ VG
Sbjct: 64 VKEFRIEKGQFVAYL--IDGNV-----FRIPIAETEPFTRKNCHICTDYTSDVSDISVGS 116
Query: 330 MGVPKYTGISMTQHPQYITVRNERGKEML 358
+G PKY + VR+++GK+++
Sbjct: 117 VGSPKYHST--------VIVRSQKGKQII 137
>gi|20093010|ref|NP_619085.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
gi|19918329|gb|AAM07565.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
Length = 345
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 33/241 (13%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILS 165
R D + LG + E+ + V Q G VT I L TG+V+AVV V
Sbjct: 74 RLDEQSSSLLGDYLEITTGKAEFDVPRKQSGGAVTAILANALDTGLVDAVVTV------- 126
Query: 166 YYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR----LLFCG 221
DP L PR ++ + E ++ G + L ++ ++ A VKR + G
Sbjct: 127 ---TEDPW-TLKPRSMVITSSEVLVGQAGSRYNWWVPL--VSSLKEAVVKRKYRNVAVVG 180
Query: 222 VGCQVQALRSV---EHHL----NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVL 272
V C VQA+R + +H L +V+G C ++ E L K + EP V
Sbjct: 181 VPCVVQAVRKMLESDHQLISPYKKSIRFVIGLFCTESFDYEKLIAGKLKSEYALEPMKVC 240
Query: 273 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 332
+ ++ L DG + +P +L D + P C C D+T AD+ G +G
Sbjct: 241 RIDVKGKLEITLN--DGT-----QYVIPLAELEDTVRPGCAVCTDFTALTADISAGAVGS 293
Query: 333 P 333
P
Sbjct: 294 P 294
>gi|218780822|ref|YP_002432140.1| coenzyme F420 hydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218762206|gb|ACL04672.1| Putative coenzyme F420 hydrogenase, beta subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 371
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 34/264 (12%)
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGA--QWTGIVTTIAIEMLKTGMVEAVVCVQS 160
+ R + D T +G H E A+ + Q G VT + L M+ V
Sbjct: 68 KARTGRAFDGTPIGPHLETYKAKAGEKTAECTFQCGGTVTALVSCALDNKMISGAVL--- 124
Query: 161 LVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 220
+D + R+ P+P L RT E+ G K + SP L+ L GV+ +
Sbjct: 125 ---------TDSEGRM-PKPRLVRTSEQARDCAGSKYSASPTLSVLNREAKRGVRNMGVV 174
Query: 221 GVGCQVQALRSVEHHLNLEKLY------VLGTNCVDNGTREGLDKFLKAASSEPETVLHY 274
CQ A+ ++ + + + V+G C L+ L E + +
Sbjct: 175 ATPCQALAISQMKMNPTDKPDFEDPVSLVIGLFCTWALDARKLEALLAEKGIEGKIIKAD 234
Query: 275 EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 334
+V + D E+P +++ ++I C C D T+ LAD+ VG V
Sbjct: 235 VPPPPAEVFVVETDQGTVEIPL-----SEVREIIPEGCSICPDMTSELADVSVGQ--VEG 287
Query: 335 YTGISMTQHPQYITVRNERGKEML 358
G + + +R ++G E++
Sbjct: 288 EAGFNT------LIIRTQKGAELV 305
>gi|312137324|ref|YP_004004661.1| coenzyme f420 hydrogenase [Methanothermus fervidus DSM 2088]
gi|311225043|gb|ADP77899.1| Coenzyme F420 hydrogenase [Methanothermus fervidus DSM 2088]
Length = 358
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 19/186 (10%)
Query: 212 AGVKRLLFCGVGCQVQALRSVEHH-----LNLEKLYVLGTNCVDNGTREGLDKFLKAASS 266
G ++ G CQ+ A +E + N +G C++N + E L K L +
Sbjct: 2 GGEDKIAMVGTPCQIIAATLMEKYSSQLKRNFPIDIKIGLFCMENFSYEYLKKLLHSYG- 60
Query: 267 EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 326
+ + + ++ + H+ +P + L + SC C D+T+ LAD+
Sbjct: 61 -----IKFRDVVSCRIEGSNAYFHLINKDVVSIPLSTLRKSMRKSCKICMDFTSELADIS 115
Query: 327 VGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKA 386
VG +G PK G S + +R+E+G +++ K I + DR + + K
Sbjct: 116 VGSVGSPK--GWST------VIIRSEKGLKLVEKAKKAKYIETKMLDADRLNLIEKLAKI 167
Query: 387 DDNAKM 392
N +
Sbjct: 168 KKNKNL 173
>gi|218782786|ref|YP_002434104.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218764170|gb|ACL06636.1| F420-non-reducing hydrogenase, beta subunit, MvhB
[Desulfatibacillum alkenivorans AK-01]
Length = 372
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 61/318 (19%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVV-----HGRGRRKDSLDDTY----- 114
C RCG C T+ A A DG +E + H D LD+
Sbjct: 17 CHRCGGCVTFCNALNYGALDLDSDGKPYYSNIEKCIECGLCHAICPEIDELDEETKRRSA 76
Query: 115 ----LGVHEELLYARKTKPVEGAQWT--GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYY 168
+G E AR + + T G++T + + + G ++A + + +
Sbjct: 77 WSEPMGRVIETTVARASSEQTRERGTDGGVITALLMHLFDRGRIDAAIVARQV------- 129
Query: 169 NSDPDDRLSPRPVLARTPEEVLAAKGV-------KPTLSPNLNTLALVEA------AGVK 215
+ RP LA + E++L A G +LS + T + ++A G +
Sbjct: 130 -----GPFARRPFLASSKEDILDAAGFYFDTSHGPKSLSDHYKTYSSIQAFDPLIKKGFE 184
Query: 216 RLLFCGVGCQVQALRSVEHHLNLEKLYV---LGTNCVDNGT-REGLDKFL-KAASSEPET 270
R+ G CQ+Q++R ++ + + LG C N E KFL +
Sbjct: 185 RVALVGTPCQIQSVRRMQTMGLIPSNSIRLCLGLFCSGNFVFTEKEQKFLADLGGFDWND 244
Query: 271 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP----SCYSCFDYTNALADLV 326
V + +++HL G + ++ VD + P +C C DY+ AD+
Sbjct: 245 VKRINIKEKFQIHLTS--GEVRQLD---------VDALDPIRRYACRYCPDYSAEFADIS 293
Query: 327 VGYMGVPKYTGISMTQHP 344
G +G + +++ P
Sbjct: 294 FGGVGAEEGWTTVISRTP 311
>gi|395645227|ref|ZP_10433087.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395441967|gb|EJG06724.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 439
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 22/201 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GI+T I I L+ G+++ + + + + L P P +A+T EE+L A G K
Sbjct: 108 GIITEILIYALEEGLIDGALVTRM----------NCNKPLEPEPFIAKTREEILEAAGSK 157
Query: 197 PTLSP-NLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---HHLNLEKLYVLGTNCVDNG 252
P N+ ++E G + G+ C +Q +R E L + LG C
Sbjct: 158 YCPVPTNVAIKYILENEG--KYAVVGLPCHIQGIRKAEAMNKKLQHRIVLHLGLFCAGTK 215
Query: 253 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPS- 311
T + L + P TV E+ + + + +P +D S
Sbjct: 216 TFLATELLLHKMNINPLTVTKIEYRGRGWPGSMSISTSVNDAAII-IPLSDYYSPYFSSF 274
Query: 312 ----CYSCFDYTNALADLVVG 328
C C D+T LAD+ G
Sbjct: 275 TPWRCILCIDHTAELADISCG 295
>gi|147677827|ref|YP_001212042.1| coenzyme F420-reducing hydrogenase, beta subunit [Pelotomaculum
thermopropionicum SI]
gi|146273924|dbj|BAF59673.1| coenzyme F420-reducing hydrogenase, beta subunit [Pelotomaculum
thermopropionicum SI]
Length = 404
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 121/305 (39%), Gaps = 57/305 (18%)
Query: 45 DWRKR-SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGR 103
DW + +P+P C+ CG+C A I LE + GR
Sbjct: 34 DWAEMDGEPVPE-----LAGACANCGICP-----------AVCPGAEVNIPVLEKFIFGR 77
Query: 104 GRRKDSLDDTYLGVHEELLYARKTK-PVE--GAQWTGIVTTIAIEMLKTGMVEAVVCVQS 160
R ++ D LG + E L A PV GA G+VT++ + L+ G+++
Sbjct: 78 ERPEEIPD---LGFYREALLAWSADLPVRKRGAS-GGLVTSVLVYALEEGIIDCA----- 128
Query: 161 LVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 220
+++ + DP LA + E++LAA K P L+ A G +R+
Sbjct: 129 --LVAGFRRDDP---CRTGAWLAASKEDILAAAQSKYACVPVNTLLSRALAQGYRRIAAV 183
Query: 221 GVGCQVQALRSVEH-----HLNLEKLYVLGTNCVDN----GTREGLDKFLKAASSEPETV 271
G+ CQ+ LR +++ + +++ G C GTR + + L +
Sbjct: 184 GLPCQIHGLRKMQYLGRPASMAKSIVFMTGLFCAAQFYFEGTRHLIVERLGLTGLDEIAA 243
Query: 272 LHY---EFMQDYKVHLKH-----LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALA 323
+ Y ++ V LK LD H + + + +PA C C D++ LA
Sbjct: 244 MSYRGGDWPGHLVVELKDGRRLLLDRH-QYMYHHLMPAFK-----RDRCEMCVDWSAELA 297
Query: 324 DLVVG 328
DL VG
Sbjct: 298 DLSVG 302
>gi|304314405|ref|YP_003849552.1| F420-dependent glutamate synthase [Methanothermobacter marburgensis
str. Marburg]
gi|302587864|gb|ADL58239.1| F420-dependent glutamate synthase [Methanothermobacter marburgensis
str. Marburg]
Length = 351
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG + E+L AR P+ Q G+VT + L+ G+V+ + V + DP
Sbjct: 270 LGEYTEILSARA--PMFRGQDGGVVTALLTYALREGIVDGALVV----------DRDPAM 317
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 206
P PVLA PE+V+ A G K ++ P L L
Sbjct: 318 PWKPVPVLAEDPEDVVRAAGTKYSVCPILKVL 349
>gi|423119235|ref|ZP_17106919.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5246]
gi|376399166|gb|EHT11786.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5246]
Length = 521
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 72/191 (37%), Gaps = 28/191 (14%)
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
++ LDG E Y+ L SC++C D AL + V + K+T I
Sbjct: 111 QIRDLDGDFEFETYYSL-----------SCHNCPDVVQALNLMAVLNPRI-KHTAIDGGT 158
Query: 343 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD--DNAKM 392
IT RN G+E L EI + +G + E K D D +
Sbjct: 159 FQNEITDRNVMGVPAVFMNGQEFGQGRMTLAEIVAKVDTGAEKRAAEELSKRDAYDVLIV 218
Query: 393 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 449
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 450 HMPSYAKKIVE 460
H+ YA +++
Sbjct: 276 HVSDYAVDVID 286
>gi|423286529|ref|ZP_17265380.1| hypothetical protein HMPREF1069_00423 [Bacteroides ovatus
CL02T12C04]
gi|392675216|gb|EIY68658.1| hypothetical protein HMPREF1069_00423 [Bacteroides ovatus
CL02T12C04]
Length = 423
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 24/242 (9%)
Query: 163 ILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 222
I++ Y + +P L P +A T EE+L +KG K TL G KR + G+
Sbjct: 129 IITRYSSENP---LQPSAFIATTSEEILESKGSKYAPVQLSGTLRKALLLG-KRYVIVGL 184
Query: 223 GCQVQALR---SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD 279
C +Q++R ++ ++ C D + + E + + F +
Sbjct: 185 PCHIQSVRKWAKIDSKVDKVIFAYFSLYCSSERCFYAQDYLCRYFNIEKCNIKEFSFRE- 243
Query: 280 YKVHLKHLDGHIEEV--------PYFCLPANDLVDVIAPS-CYSCFDYTNALADLVVGYM 330
K LK + + E + P F + P+ C C D+ LAD+ G +
Sbjct: 244 -KGKLKFIGNNGENLLSMRRGDSPVFHKYYRLVGSHFKPNRCQMCVDHYGYLADMSFGDI 302
Query: 331 GVPKYT----GIS--MTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETV 384
G+ YT GI+ + ++P++I + NE K+ +K+L S GD ++
Sbjct: 303 GIAPYTQDKIGINSLIVRNPKFIEILNEAIKDGCIELKSLDPDLLNKSQGDMMFSRLKKA 362
Query: 385 KA 386
KA
Sbjct: 363 KA 364
>gi|269926440|ref|YP_003323063.1| coenzyme F420 hydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269790100|gb|ACZ42241.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 396
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 102/264 (38%), Gaps = 30/264 (11%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
LG E AR + ++G Q G+VT + I +++ G ++ +L+ + P
Sbjct: 96 LGTILESYTARVSPYIDGVQDGGVVTALLIALMEAGEIDG-------ALLARESKTTP-- 146
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLAL--VEAAGVKRLLFCGVGCQVQALRSV 232
P +ARTPEEV+ G + L+ L L + ++ G C++Q L+++
Sbjct: 147 -WKAEPFIARTPEEVIECAGSFYNQTMALSHLDLKKYKLGPDAKIALVGTPCEIQTLKAM 205
Query: 233 EHH------LNLEKLYV-LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 285
+ N++ + + + C N E L ++ + LH D + K
Sbjct: 206 QARPWNWGSSNVDAVVLTIALLCTKNFNYEKL--MVQEIERKRGIPLHQIGKVDV-IRGK 262
Query: 286 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 345
L E P D C C D+ AD+ VG +G G S
Sbjct: 263 MLVYDHEGNTLIDEPVKDFHGAALKGCDECADFLGRTADISVGSVG--SADGYSS----- 315
Query: 346 YITVRNERGKEMLSLVKNLLEITP 369
+ +R + GK K LE+ P
Sbjct: 316 -VLIRTQAGKRAFEYAKPKLELRP 338
>gi|119887|sp|P06130.1|FDHB_METFO RecName: Full=Formate dehydrogenase subunit beta
gi|149709|gb|AAA72183.1| formate dehydrogenase B (fdhB) [Methanobacterium formicicum]
Length = 399
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 41/259 (15%)
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
++ YA+ + E ++ G VTT+ +LK G+V+AV+ V S D
Sbjct: 6 DMFYAKSSDAEIAEAGEYGGAVTTLLKFLLKEGIVDAVLAVDSSA-----------DLYD 54
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---- 233
P+L PE+V+ A G + NL + G + + A+ VE
Sbjct: 55 VVPILIEDPEDVVKAAGSLHFGTLNLAKVVTRYLDGAQDMKIAVTVKPCDAMTMVELMKR 114
Query: 234 HHLNLEKLYVLGTNCVDNGT------REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 287
+N + + ++G NC GT R+ +++F + +P++V+ E + K+ ++
Sbjct: 115 EKVNADNVIMVGLNC--GGTMPPVKGRQMMEEFYEV---DPDSVVKEEIAKG-KLIVETE 168
Query: 288 DGHIEEVPYFCLPANDLVDV---IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 344
DG +E+P ++L D +C C +ADL G GV +
Sbjct: 169 DGTEKEIPI-----DELEDEGFGRRTNCRRCEVNIPRMADLACGNWGVIG----PLAGKA 219
Query: 345 QYITVRNERGKEMLSLVKN 363
+I V + +G E+L K
Sbjct: 220 TFIEVCSPKGAEVLEKAKE 238
>gi|302342322|ref|YP_003806851.1| coenzyme F420 hydrogenase [Desulfarculus baarsii DSM 2075]
gi|301638935|gb|ADK84257.1| Coenzyme F420 hydrogenase [Desulfarculus baarsii DSM 2075]
Length = 360
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 41/241 (17%)
Query: 133 AQWTGIVTTIAIEMLKTGMV-EAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLA 191
AQ+ G+V+ + L G+V EAVV + D R +P+ V R ++VLA
Sbjct: 111 AQYGGVVSALLGLALDEGVVGEAVV-------------TKADQRGAPQGVRVRRRDQVLA 157
Query: 192 AKGVKPTLSPNLNTL--ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL-----YVL 244
A G + L+ L AL E A L + CQ A S+ H + V+
Sbjct: 158 AAGSRYAAGAGLSALNQALAETAS-HPLAVVALPCQALAAASMSAHPGYPQAASRLKLVI 216
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK--VHLKHLDGHIEEVPYFCLPAN 302
G C N + GL L+ A + VL +F + + G E +P
Sbjct: 217 GLFCTLNLSARGLRALLEQAGVA-QPVLRADFPPPPAGVFQVTNAAGMAE------IPLE 269
Query: 303 DLVDVIAPSCYSCFDYTNALADLVVGYM-GVPKYTGISMTQHPQYITVRNERGKEMLSLV 361
+ + C C D T LAD+ VG + G P + + R G E++ L
Sbjct: 270 QVHQAVLKGCGLCPDLTAELADVAVGAVEGRPGWN---------TVLARTPAGLELVELA 320
Query: 362 K 362
+
Sbjct: 321 R 321
>gi|374628405|ref|ZP_09700790.1| formate dehydrogenase, beta subunit (F420) [Methanoplanus limicola
DSM 2279]
gi|373906518|gb|EHQ34622.1| formate dehydrogenase, beta subunit (F420) [Methanoplanus limicola
DSM 2279]
Length = 410
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 39/263 (14%)
Query: 121 LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRP 180
L +A+ +E + G VT I L+TG+V+AV V+ Y D +P
Sbjct: 9 LAWAKDAAYLEKGECGGAVTAILKNALETGLVDAVFAVEK----GY-------DIYDAKP 57
Query: 181 VLARTPEEVLAAKG---VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHH 235
PE++ G L P L ++ A +L GC +AL +
Sbjct: 58 AFITNPEDIERLSGSLHCGTLLMPKL-IKKFLDGAKNMKLAVTLKGCDAKALYELAKRQQ 116
Query: 236 LNLEKLYVLGTNCVDNGTREGLDKFLKAA-SSEPETVLHYEFMQDYKVHLKHLDGH---- 290
+NL+ +Y +G NC + + K ++ P+ V+ E + + + H
Sbjct: 117 INLDNIYTIGLNCGGSISPVAGRKMIEEKFGVSPDDVVKEEIDKGQFIIVTKDGEHKGIK 176
Query: 291 ---IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 347
+EE Y +C C D+ G GVP T +I
Sbjct: 177 IDELEEEGYG----------RRANCQRCKTKVPRQCDIACGNWGVPADKAGKAT----FI 222
Query: 348 TVRNERGKEMLSLVKNLLEITPT 370
V +++G E+++ V +E PT
Sbjct: 223 EVCSDKGAELINKVSGGIETAPT 245
>gi|410091293|ref|ZP_11287864.1| glycolate oxidase iron-sulfur subunit [Pseudomonas viridiflava
UASWS0038]
gi|409761387|gb|EKN46459.1| glycolate oxidase iron-sulfur subunit [Pseudomonas viridiflava
UASWS0038]
Length = 408
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 179 RPVLARTPEEVLAAKG-VKPTLSPNLN--TLALVEAAGVKRLLFCGVGCQVQALRSVEHH 235
RPV R +VL +G V+P LSPN N T +++ G+ GC +V++H
Sbjct: 161 RPV-TRQARQVLMLEGCVQPALSPNTNAATARVLDRLGISVTPISEAGC----CGAVDYH 215
Query: 236 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHY-----EFMQDYKVHLKHLDGH 290
LN ++ + +G R +D + A + ++++ F++DY L+H +
Sbjct: 216 LNAQEAGL-------DGARRNIDAWWPAIEAGAQSIVQTASGCGAFVKDYGHLLRHDPTY 268
Query: 291 IEEVPYFCLPANDLVDVI 308
E+ A DLV+V+
Sbjct: 269 AEKAAQVSAKARDLVEVL 286
>gi|395645325|ref|ZP_10433185.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395442065|gb|EJG06822.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 433
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 41/241 (17%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
+Q GIVT + + + +E + N +P+ + P+ V A + E++ A
Sbjct: 96 SQSGGIVTALLCYLFEQKEIEGAI----------VNNLNPETK-RPQAVFASSMSEIIEA 144
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH---HLNLEKLYVLGTNCV 249
G S + T+ +E + K +GCQ ++L+ + ++NL Y +G C
Sbjct: 145 SGSYYAQSSVVKTI--LEHSDKKSAAVV-LGCQAESLQLIREKYPNINL-PTYTIGLVCA 200
Query: 250 DNGTREGLDKFLKAASSEPETVLHYEFMQDY-----KVHLKHLDGHIEEVPYFCLPA--- 301
+ + +D ++ + + E + + F VH+K G + LP
Sbjct: 201 GQYSGDMIDDLIEQSGCDGEKISEFRFRDKRVGWPGDVHVKTPSGD------YWLPKERR 254
Query: 302 NDLVDVIA-PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV---RNERGKEM 357
+ L V C C+D N D+V G GIS Q+P+ TV R +GK++
Sbjct: 255 HSLKQVYELHRCMVCYDQMNIFCDIVCG-----DPWGISHKQNPEGYTVVIARTTKGKKI 309
Query: 358 L 358
L
Sbjct: 310 L 310
>gi|294496614|ref|YP_003543107.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain protein
[Methanohalophilus mahii DSM 5219]
gi|292667613|gb|ADE37462.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalophilus mahii DSM 5219]
Length = 387
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 36/214 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVE-AVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLA 191
Q G+VT + L+ G+++ AVV QS D P ++A +VL
Sbjct: 137 GQDGGVVTALLAYGLEEGLIDCAVVTTQS-----------KDQPWKPVAIIAEDRAQVLE 185
Query: 192 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNLEKLYVL 244
+ G + S + L G++ + F G C + A+ ++ H + L
Sbjct: 186 SSGSMYSHSMTMEQLMQAIQQGMRSIAFVGPSCNIDAVHKMQRSPYGFLHLFMRANVLRL 245
Query: 245 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE-----EVPYFCL 299
G C+D + EG+ +F++ H + D + +K G E ++ F L
Sbjct: 246 GLFCMDTFSYEGIREFVEN---------HGMRLADIEA-MKIRKGKFEFEQAGQISRFSL 295
Query: 300 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 333
D + + SC C D +D+ G +G P
Sbjct: 296 SEFD--EYRSSSCKFCTDMAAENSDISFGGVGTP 327
>gi|421726096|ref|ZP_16165273.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca M5al]
gi|410373063|gb|EKP27767.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca M5al]
Length = 521
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 265 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 324
S E +T+L ++++DG E Y+ L SC++C D AL +
Sbjct: 102 SKEAQTLLE---------QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-N 140
Query: 325 LVVGYMGVPKYTGISMTQHPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDR 376
L+ K+T I + IT RN GKE L EI + +G
Sbjct: 141 LMAVLNPRIKHTAIDGGTYQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAE 200
Query: 377 RPFVMETVK--ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 434
+ E K A D +G GPS A L+G + F LD I N
Sbjct: 201 KRAAEELNKREAYDVLIVGSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIEN 257
Query: 435 YLHVNRAWGKKRA---DKHMPSYAKKIVE 460
Y+ V + G+K A H+ Y +++
Sbjct: 258 YISVPKTEGQKLAGALKAHVSEYDVDVID 286
>gi|375259622|ref|YP_005018792.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca KCTC
1686]
gi|397656690|ref|YP_006497392.1| alkyl hydroperoxide reductase protein F [Klebsiella oxytoca E718]
gi|402839691|ref|ZP_10888175.1| alkyl hydroperoxide reductase, F subunit [Klebsiella sp. OBRC7]
gi|423101878|ref|ZP_17089580.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5242]
gi|365909100|gb|AEX04553.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca KCTC
1686]
gi|376390704|gb|EHT03387.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5242]
gi|394345246|gb|AFN31367.1| Alkyl hydroperoxide reductase protein F [Klebsiella oxytoca E718]
gi|402287617|gb|EJU36056.1| alkyl hydroperoxide reductase, F subunit [Klebsiella sp. OBRC7]
Length = 521
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 265 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 324
S E +T+L ++++DG E Y+ L SC++C D AL +
Sbjct: 102 SKEAQTLLE---------QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-N 140
Query: 325 LVVGYMGVPKYTGISMTQHPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDR 376
L+ K+T I + IT RN GKE L EI + +G
Sbjct: 141 LMAVLNPRIKHTAIDGGTYQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAE 200
Query: 377 RPFVMETVK--ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 434
+ E K A D +G GPS A L+G + F LD I N
Sbjct: 201 KRAAEELNKREAYDVLIVGSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIEN 257
Query: 435 YLHVNRAWGKKRA---DKHMPSYAKKIVE 460
Y+ V + G+K A H+ Y +++
Sbjct: 258 YISVPKTEGQKLAGALKAHVSEYDVDVID 286
>gi|408382276|ref|ZP_11179821.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814932|gb|EKF85554.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
Length = 685
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 129/335 (38%), Gaps = 70/335 (20%)
Query: 63 DHCSRCGLCDTYYIAHV---------KDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
D C++CG C ++ + C G GM E V G+ + K T
Sbjct: 83 DMCAKCGTCAVICPNNILSFDGKPELTEECLRNGHGMC-FEVCPRVSSGKYQIKIREKFT 141
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPD 173
EE+ Y R + Q G VTT +L+ ++ + V D
Sbjct: 142 -----EEMYYGRGSSS---GQDGGAVTTFLKHLLENDKIDGAIVV-------------GD 180
Query: 174 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 233
+ P ++ + E++L K T+S L L G++R+ + CQ+ LR ++
Sbjct: 181 EYWKPVSLIVQNAEDLLKTSKSKYTIS-TLEALKTAGDMGLERVAIVALPCQINGLRKLQ 239
Query: 234 HHLNLEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEF 276
+ L K Y++G C + + + L+ + E V +
Sbjct: 240 YFPYLAKHEEELGRTGKPVKLPKIEYLIGLFCTEKFDYGNMKQILEDNQIKMEDVEKFN- 298
Query: 277 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 336
++ K+ + +DG +++ D +++ A C C D+ +AD+ +G +G P
Sbjct: 299 VKKGKLRV-QVDGEEKKIDL------DKIELCA-GCKMCRDFDAEMADVSIGSVGSP--V 348
Query: 337 GISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 371
G S I +R +G+E +K LE+ +
Sbjct: 349 GYST------IIIRTPKGQE----IKEALELEEGV 373
>gi|423128049|ref|ZP_17115728.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5250]
gi|376395088|gb|EHT07738.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5250]
Length = 521
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
++++DG E Y+ L SC++C D AL +L+ K+T I
Sbjct: 111 QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-NLMAVLNPRIKHTAIDGGT 158
Query: 343 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVK--ADDNAKM 392
+ IT RN GKE L EI + +G + E K A D +
Sbjct: 159 YQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAEKRAAEELNKREAYDVLIV 218
Query: 393 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 449
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 450 HMPSYAKKIVE 460
H+ Y +++
Sbjct: 276 HVSEYDVDVID 286
>gi|423107294|ref|ZP_17094989.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5243]
gi|423113172|ref|ZP_17100863.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5245]
gi|376389420|gb|EHT02112.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5243]
gi|376389714|gb|EHT02404.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5245]
Length = 521
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 283 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 342
++++DG E Y+ L SC++C D AL +L+ K+T I
Sbjct: 111 QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-NLMAVLNPRIKHTAIDGGT 158
Query: 343 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD--DNAKM 392
+ IT RN GKE L EI + +G + E K + D +
Sbjct: 159 YQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAEKRAAEELNKRESYDVLIV 218
Query: 393 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 449
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 450 HMPSYAKKIVE 460
H+ Y +++
Sbjct: 276 HVSEYDVDVID 286
>gi|327401003|ref|YP_004341842.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327316511|gb|AEA47127.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Archaeoglobus veneficus SNP6]
Length = 405
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
+G + ++L A+ T+ A +G T++ I ++ +++ + V
Sbjct: 209 IGPYRQILSAKSTRIDAVAAGSGAATSLLIYAMEAELIDCAIVV---------------- 252
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 234
+P +A P E+ A G+K ++P L L G +++ GV C V A R ++
Sbjct: 253 --GKKPFIATKPHELTKAAGIKFAVAPTLALLKDAVKRGFRKIAVVGVPCHVTAARKMQK 310
Query: 235 HLNLEKLYVLGTNC 248
E + G C
Sbjct: 311 LGCDEIKLIFGVFC 324
>gi|282164844|ref|YP_003357229.1| putative coenzyme F420 hydrogenase subunit beta [Methanocella
paludicola SANAE]
gi|282157158|dbj|BAI62246.1| putative coenzyme F420 hydrogenase subunit beta [Methanocella
paludicola SANAE]
Length = 341
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 299 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 345
LP + L + + P C C D+T+ LAD+ VG +G + + +T+ P+
Sbjct: 257 LPLSSLAEFVKPGCRKCNDFTSKLADISVGSVGSAAGSSVVITRTPE 303
>gi|399890006|ref|ZP_10775883.1| related to F420H2-dehydrogenase, beta subunit [Clostridium arbusti
SL206]
Length = 389
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 215 KRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPET-VLH 273
K +LF G CQV AL + +H N + LY C + +K+LK ++ ++
Sbjct: 155 KFVLFTGTPCQVNALYNFLNH-NYDNLYTCDVICHGVPSPLVFNKYLKYMEDNKDSKIVK 213
Query: 274 YEF------MQDYKVHLKHLDGH-----IEEVPYFCLPANDLVDVIAPSCYSCFDYT-NA 321
Y F + Y + +++ D + E Y +DL + SCY+C T N
Sbjct: 214 YNFRDKTFGWKKYNIKIQYEDNNSTLTKFNEDIYMKGFLSDL--YLRNSCYNCKCKTDNV 271
Query: 322 LADLVVG-YMGVP-KYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 370
++D+ +G + G+ KY I + + + +G++++ ++K+ + + P
Sbjct: 272 MSDITIGDFWGIENKYPEIDDDKGMAAVIINTTKGRKIIDILKDNIFMQPV 322
>gi|424875371|ref|ZP_18299033.1| coenzyme F420-reducing hydrogenase, beta subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393171072|gb|EJC71119.1| coenzyme F420-reducing hydrogenase, beta subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 412
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 39/252 (15%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVE 153
LET + GR R+ + + +LG+H E+L YA T+ + G +T + + ++
Sbjct: 67 LETGLFGRPRKPE---ERWLGIHREVLGCYASDTEINARSASGGSITELLLSAKDKLGLD 123
Query: 154 AVVCVQSLVILSYYYNSDPDDRLSPRPVLA-----RTPEEVLAAKGVKPTLSPNLNTLA- 207
A++ V R RP A T E++L + L P L L
Sbjct: 124 AILAV---------------GRELERPGFAVGHLFETREDLLESCQSTYQLFPYLRILKR 168
Query: 208 -LVEAAGVKRLLFCGVGCQVQALRSVEHHLN-------LEKLYVLGTNCVDNGTREGLDK 259
L + R+ G+ C VQA+R ++ N +V+ C N EG D
Sbjct: 169 LLTDMNWEYRIAMVGLACHVQAIRKLQALDNELGARARARIAFVVEAACSSNTLPEGTDS 228
Query: 260 FLK---AASSEPETVLHYEF-MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 315
L+ S + L Y + ++ + DG I + ++ ++ C SC
Sbjct: 229 LLRNEAGVSLDRVKSLRYRAGLYPGEIAAETADGEIVTIAFW-KAVHEFKRFKTHRCLSC 287
Query: 316 FDYTNALADLVV 327
D+ + LAD+ +
Sbjct: 288 GDWFSGLADVAI 299
>gi|70731995|ref|YP_261737.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Pseudomonas protegens Pf-5]
gi|68346294|gb|AAY93900.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Pseudomonas protegens Pf-5]
Length = 402
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 28/245 (11%)
Query: 97 ETVVHGRGRRKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEA 154
E + GR RR + + +LG+ + + AR T P V + G TT+ + + V+
Sbjct: 67 ELELFGRTRRAE---ERWLGISRQAIGARSTDPQIVRRSASGGTATTLLLTAREHFDVD- 122
Query: 155 VVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAG 213
L+ P P L ++ L+P LN L E
Sbjct: 123 ---------LTLTMGRHPGQGWRSAPQLGSAAAAIINNAQSTYQLAPYLNALRECYEQQP 173
Query: 214 VKRLLFCGVGCQVQALRSVE-------HHLNLEKLYVLGTNCVDNGTREGLDKFL-KAAS 265
R+ G+ C VQA+R ++ H + V+ T C N G + +
Sbjct: 174 DARIAVVGLACHVQAIRKLQRRDTAIGHWARSRIICVIETACSSNTLPAGTHSIISEVLG 233
Query: 266 SEPETVLHYEFMQ-DY--KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNAL 322
+P+ V ++ + DY ++ + LD + ++ + L D C SC D+ + L
Sbjct: 234 QDPQQVRDIKYREGDYPGRLQVTLLDSQTFGIDFWEI-LGKLKDNKTFRCLSCGDWMSGL 292
Query: 323 ADLVV 327
AD+ V
Sbjct: 293 ADVSV 297
>gi|383319626|ref|YP_005380467.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
gi|379320996|gb|AFC99948.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
Length = 341
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 176 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEH 234
L+ P + E + A G K T + L + +++ ++ + G C VQA+ +
Sbjct: 132 LNAYPCIIEDAEGLERAAGSKYTTNGILEAMRGIIKDESIRSVALVGTPCTVQAIGLLRK 191
Query: 235 HLN--LEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ----DYKVH 283
N E+L +++G C E D L + +V + + + K+
Sbjct: 192 SSNEYAERLAHKVRFLIGLFCF-----ESFDSSLIPEVARRLSVPSWRIAKMNAGEGKLT 246
Query: 284 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 343
+ G + LP + L D + P C+ C D+T+ LAD+ VG +G + + +
Sbjct: 247 VTLRSGEVRA-----LPLSSLTDFVRPGCFKCNDFTSRLADVSVGSVGSAHGSSALIVRT 301
Query: 344 PQ 345
P+
Sbjct: 302 PE 303
>gi|15678308|ref|NP_275423.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621331|gb|AAB84786.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 689
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLS 177
EE+LY R T Q G+VT+ +++ ++ + V ++
Sbjct: 141 REEILYGRGTAR---GQDGGVVTSFLRYLMENDRIDGAIVVGH-------------EKWK 184
Query: 178 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 237
P ++ ++ +++ A G K ++S L L G++ + + CQ+ LR +++
Sbjct: 185 PVSLVVQSTDDLEATSGSKYSIS-TLEALKTASELGLESVAVVALPCQINGLRKLQYFPY 243
Query: 238 LEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 280
L K Y++G C + L + L + V ++ +
Sbjct: 244 LAKHDPELGRSGRPVKLPEIRYLIGLFCTEKFEYTDLREALMDEGIDISEVKKFDIRRGK 303
Query: 281 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 340
V HLDG + L L D C C D+ LAD+ +G G P G S
Sbjct: 304 MV--VHLDGGERTIE---LSRIGLCD----GCRLCRDFDAELADVSIGSAGSPD--GYST 352
Query: 341 TQHPQYITVRNERGKEMLSLVKNLLE 366
+ +R +RG E+ + +LLE
Sbjct: 353 ------VIIRTDRGAEIREAL-DLLE 371
>gi|333978791|ref|YP_004516736.1| coenzyme F420 hydrogenase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822272|gb|AEG14935.1| Coenzyme F420 hydrogenase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 405
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 109/289 (37%), Gaps = 42/289 (14%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVE---GAQWTGIVTTIAIEMLKTGMV 152
LE V GR R + D LG + E T V GA G+VT + I L+ G++
Sbjct: 70 LEQFVFGRVREEQIPD---LGFYREARVGWATDRVTRQLGAS-GGLVTALLIYALEKGII 125
Query: 153 EAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA 212
+ + + D R R LA E++LAA K P L
Sbjct: 126 DGALVAG--------FRQDLPWRTEAR--LAVNGEQLLAAARSKYACVPVNTLLNQALEQ 175
Query: 213 GVKRLLFCGVGCQVQALRSVEHH-----LNLEKLYVLGTNCVDN----GTREGLDKFLKA 263
G +RL G+ C + LR ++ + L + ++G C GTR L + L
Sbjct: 176 GYRRLAVVGLPCHIHGLRKMQFYGQPASLTRGVVLMVGLFCASQFYFEGTRHLLVERLGV 235
Query: 264 ASSEPETVLHY---EFMQDYKVHLKH-----LDGHIEEVPYFCLPANDLVDVIAPSCYSC 315
E L Y ++ V LK LD H E + + +PA C C
Sbjct: 236 DRLEDIASLSYRGGDWPGHLVVELKDGRRLLLDRH-EYMYHHLMPAFK-----RDRCEMC 289
Query: 316 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML-SLVKN 363
D+ LADL VG P+ VR+ G+E+L VKN
Sbjct: 290 VDWAAELADLSVGDYWDPQVRA-GHALGTSSCLVRSPAGEELLDGAVKN 337
>gi|410670576|ref|YP_006922947.1| coenzyme F420 hydrogenase beta subunit [Methanolobus psychrophilus
R15]
gi|409169704|gb|AFV23579.1| coenzyme F420 hydrogenase beta subunit [Methanolobus psychrophilus
R15]
Length = 341
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 113/300 (37%), Gaps = 53/300 (17%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDD 174
+G + +++ A+ + Q G VT I L+ GM++AVV V DP
Sbjct: 78 IGTYIDIVSAKAEFGIPRKQSGGAVTAILANALEQGMIDAVVTVVE----------DPW- 126
Query: 175 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 234
L P + + E ++ G + L +A ++ A + R V + H
Sbjct: 127 TLRPSSAVITSGEALVHHAGSRYNWWVPL--VASLKEAIINRKFTNVAVVGVPCVVEAIH 184
Query: 235 HLNLEKL-----------YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYK 281
+ L V+G C + E L DK + + +P + ++ +
Sbjct: 185 QMRESDLDLLRPFRKYIRLVVGLFCTETFDYEKLVQDKLIAQKNLDPLDITRFDVKGKLE 244
Query: 282 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 341
+ LK DG + L N++ D + P C C D T +D+ G +G P
Sbjct: 245 ITLK--DGSLT-----VLSLNEVEDCVRPGCKICTDLTALHSDISAGSIGSP-------- 289
Query: 342 QHPQYITVRNERGKEMLSLVKNLLEITPTISSGD---RRPFVMETVKADDNAKMGRGPSQ 398
Q + +RN G++ +T I +G + +E++K KM R P +
Sbjct: 290 QGYTTLIIRNPTGRQF---------VTSAIGNGKLSLEKGVNLESIKKLSTKKMERMPEE 340
>gi|333987083|ref|YP_004519690.1| coenzyme F420 hydrogenase [Methanobacterium sp. SWAN-1]
gi|333825227|gb|AEG17889.1| Coenzyme F420 hydrogenase., Hydrogensulfite reductase
[Methanobacterium sp. SWAN-1]
Length = 686
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 45/222 (20%)
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 232
D+ P ++ + E++L K ++S L L G++++ + CQ+ LR +
Sbjct: 179 DEHWKPVSLIVQDAEDLLQTSKSKYSIS-TLEALKTAGEMGLQKVAVVALPCQINGLRKL 237
Query: 233 EHHLNLEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYE 275
++ L K Y++G C + + + LK S + +
Sbjct: 238 QYFPYLAKHEEELGKSGKPAKLPKIEYLIGLFCTEKFDYGNIKEILKDNSINIKDAEKF- 296
Query: 276 FMQDYKVH--LKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGV 332
D K+ L +++G +++ DL + + C C D+ LAD+ +G G
Sbjct: 297 ---DVKMGKLLVYVNGEEKKI--------DLKKIELCSGCNMCRDFDAELADVSIGSTGS 345
Query: 333 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 374
P G S I +R E+G+E +KN LE+ + G
Sbjct: 346 P--NGYST------IIIRTEKGEE----IKNALELKEGVDVG 375
>gi|15678221|ref|NP_275336.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621237|gb|AAB84699.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 352
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 113 TYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDP 172
T LG + E+L AR P+ Q G+VT + L+ G+++ + V + D
Sbjct: 269 TPLGEYIEILSARA--PMFRGQDGGVVTALLTYALREGIIDGALVV----------DRDQ 316
Query: 173 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 206
+ P PVLA P++++ A G K + P L L
Sbjct: 317 ERPWKPLPVLAEEPQDIVKAAGTKYSACPLLKVL 350
>gi|20093760|ref|NP_613607.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
gi|19886667|gb|AAM01537.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 377
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 24/241 (9%)
Query: 124 ARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPV 181
AR + P V+ A G+VT + L+ +V+ VVCV+ D L RP+
Sbjct: 14 ARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGA-----------DALDGRPI 62
Query: 182 LARTPEEVLAAK-GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL-RSVEHHL-NL 238
+ P EV + PT L E ++ + C C + L R E L N
Sbjct: 63 VVDDPAEVPSGSYHCAPTQLARLVAELHREDPTLRVAVTCR-PCDARTLDRLAERDLVNP 121
Query: 239 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 298
+++Y +G NC + + L+ +P V E ++ + V ++ DG EE+
Sbjct: 122 DRVYRIGLNCGGTFEPRVVLEILEEHGVDPLDVEREEVVKGHLV-IELRDG--EEISVSI 178
Query: 299 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 358
+ +C C + ADL G GVP + ++ V+ E G+++L
Sbjct: 179 DELEEQDSGRRENCRRCDENIPERADLACGNWGVPD----DLQGEWTFVEVKTEDGRDLL 234
Query: 359 S 359
+
Sbjct: 235 A 235
>gi|223949797|gb|ACN28982.1| unknown [Zea mays]
Length = 89
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 369 PTISSGDRRPFVMETVKADDNAKMG 393
+I+ G R+PFVMETVK DD AK+G
Sbjct: 26 TSIAKGSRQPFVMETVKDDDAAKLG 50
>gi|150403004|ref|YP_001330298.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
maripaludis C7]
gi|150034034|gb|ABR66147.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C7]
Length = 359
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 40/244 (16%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLA 183
A+ T + Q G+VT I G+++ ++V+L + DP + LA
Sbjct: 106 AKSTLETKNIQSGGVVTAILANAFDEGLIDG-----AIVMLEDKWTMDP------KSYLA 154
Query: 184 RTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQALRS-------- 231
+ E+VL G + + P L L EA VK+L G C + A+
Sbjct: 155 TSKEDVLKTAGSRYNWNVPILEVLK--EAVMVKKLNKLAIVGTPCVINAVYHMMATSNDL 212
Query: 232 VEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 291
VE +L V C + + + K +K P + E + K+ + + G++
Sbjct: 213 VEPFKEAIRLKV-ALFCFETFDYDKMLKKIKELDVNPWDIKKME-IDKGKLIVSTIHGNV 270
Query: 292 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 351
F + ++L ++ C C D+T +D+ VG +G P+ G S + +RN
Sbjct: 271 -----FSIKIDELDGMVRKGCKVCRDFTGISSDISVGNVGTPE--GYST------VLIRN 317
Query: 352 ERGK 355
+ GK
Sbjct: 318 KWGK 321
>gi|262163802|ref|ZP_06031542.1| coenzyme F420-dependent oxidoreductase [Vibrio mimicus VM223]
gi|262027782|gb|EEY46447.1| coenzyme F420-dependent oxidoreductase [Vibrio mimicus VM223]
Length = 400
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAAKGVK 196
GIVT + L++ +V+ VV + S D ++ + +++ +++ + G +
Sbjct: 96 GIVTQTLLHALESKLVDLVVQIAS----------DKNNPIENIVKISKNKNDLIESTGSR 145
Query: 197 PT-LSPNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEKLYVLGTNCVDNG 252
+ SP +N + +++ K++ F G C ALR S++ + + ++ C
Sbjct: 146 YSPASPLINIVQIIKKNPNKKIAFVGKPCDCVALRNLMSIDDEVKKSIILIVSFFCAGTP 205
Query: 253 TREGLDKFLKAASSEPETVLHYE---FMQDYKVHLKHLDGH--------IEEVPYFCLPA 301
+R G+ K L + LHY+ + D+ K G I + Y
Sbjct: 206 SRNGVKKVLDS--------LHYDNKKRVTDFYYRGKGWPGKTTLIQGRSINSMDYSESWG 257
Query: 302 NDLVDVIAPSCYSCFDYTNALADLV 326
N L I C C D T +AD+V
Sbjct: 258 NLLGPTIQSRCKLCADGTGEVADIV 282
>gi|289192916|ref|YP_003458857.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus sp. FS406-22]
gi|288939366|gb|ADC70121.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus sp. FS406-22]
Length = 261
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 25/239 (10%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSLVILSYYYNSDPDDRLSPRPVLARTPEEVLAA 192
AQ G TT+ L+ G+++AVV V D P LA TP E+L +
Sbjct: 14 AQDGGFTTTLLSYCLENGILDAVVVV-------------GDKNWKPVAYLATTPTELLKS 60
Query: 193 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 252
K ++SPN N L ++ G+ C + L ++ +L L+ +G C N
Sbjct: 61 TKSKYSISPN-NKLLEYATENYDKVGLVGLPCHI--LGGLQFNLTLK----VGLFCTKNF 113
Query: 253 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD----GHIEEVPYFCLPANDLVDVI 308
E + +K + + K ++ L E+V Y +P ++ +
Sbjct: 114 YYETIKNIIKERLGLNMDEVSKMNITKGKFVVETLKKKGFAGTEKVVYE-IPIKEIEKLC 172
Query: 309 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 367
C C D++ AD+ VG +G + ++ + NE ++ L VK ++I
Sbjct: 173 NLGCRVCTDFSAKYADVSVGSVGSEDGWNTVIIRNKMVEDIINEMVEKGLIEVKETVDI 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,637,482,638
Number of Sequences: 23463169
Number of extensions: 333457027
Number of successful extensions: 1046826
Number of sequences better than 100.0: 469
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 1045409
Number of HSP's gapped (non-prelim): 653
length of query: 475
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 329
effective length of database: 8,933,572,693
effective search space: 2939145415997
effective search space used: 2939145415997
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)