Query         011873
Match_columns 475
No_of_seqs    183 out of 1813
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 06:10:23 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011873.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011873hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02774 brassinosteroid-6-oxi 100.0 9.2E-80   2E-84  592.3  44.3  459    1-473     1-462 (463)
  2 PLN02500 cytochrome P450 90B1  100.0 3.6E-79 7.9E-84  592.9  45.9  441   25-473    32-488 (490)
  3 KOG0156 Cytochrome P450 CYP2 s 100.0 2.5E-79 5.5E-84  575.2  42.2  412   29-451    24-463 (489)
  4 PLN02302 ent-kaurenoic acid ox 100.0 4.1E-77 8.9E-82  581.4  47.1  448   26-475    37-488 (490)
  5 PLN02196 abscisic acid 8'-hydr 100.0 3.4E-77 7.4E-82  573.9  44.2  448   10-474    14-462 (463)
  6 KOG0158 Cytochrome P450 CYP3/C 100.0 1.8E-77 3.9E-82  553.4  39.6  441   27-475    27-499 (499)
  7 PLN03141 3-epi-6-deoxocathaste 100.0 5.8E-77 1.3E-81  571.7  43.3  442   27-475     3-450 (452)
  8 PLN02971 tryptophan N-hydroxyl 100.0 1.1E-75 2.3E-80  573.1  44.3  439   28-474    54-533 (543)
  9 PLN02987 Cytochrome P450, fami 100.0 2.4E-74 5.1E-79  552.0  46.2  464    1-475     1-469 (472)
 10 PLN02290 cytokinin trans-hydro 100.0 4.1E-75 8.8E-80  568.8  41.5  440   29-475    40-515 (516)
 11 PLN02687 flavonoid 3'-monooxyg 100.0 7.2E-75 1.6E-79  565.6  42.5  452   13-474    16-508 (517)
 12 KOG0157 Cytochrome P450 CYP4/C 100.0 8.6E-76 1.9E-80  563.4  35.2  437   29-475    33-496 (497)
 13 PLN02183 ferulate 5-hydroxylas 100.0   7E-75 1.5E-79  565.6  41.9  437   28-474    33-511 (516)
 14 PLN00168 Cytochrome P450; Prov 100.0 6.6E-74 1.4E-78  559.1  42.9  443   28-475    32-517 (519)
 15 PLN03234 cytochrome P450 83B1; 100.0 9.9E-74 2.1E-78  557.2  42.9  441   24-474    21-498 (499)
 16 PLN00110 flavonoid 3',5'-hydro 100.0 1.8E-73 3.8E-78  552.4  42.6  439   26-475    26-497 (504)
 17 KOG0684 Cytochrome P450 [Secon 100.0 1.5E-73 3.2E-78  501.5  37.0  431   31-475    31-485 (486)
 18 PTZ00404 cytochrome P450; Prov 100.0 1.3E-73 2.9E-78  553.8  37.6  437   22-474    20-482 (482)
 19 PLN03112 cytochrome P450 famil 100.0 9.9E-73 2.1E-77  551.7  43.3  445   22-475    23-508 (514)
 20 PLN02394 trans-cinnamate 4-mon 100.0 3.5E-72 7.5E-77  546.9  43.1  444   22-475    21-502 (503)
 21 PLN02966 cytochrome P450 83A1  100.0   2E-72 4.3E-77  547.0  40.6  419   25-451    23-470 (502)
 22 PLN03195 fatty acid omega-hydr 100.0 4.3E-72 9.3E-77  547.0  40.8  435   33-475    32-516 (516)
 23 KOG0159 Cytochrome P450 CYP11/ 100.0 3.4E-72 7.3E-77  505.8  36.0  436   30-475    49-518 (519)
 24 PLN02169 fatty acid (omega-1)- 100.0 1.7E-71 3.8E-76  537.3  41.4  430   32-474    32-499 (500)
 25 PLN03018 homomethionine N-hydr 100.0 1.6E-70 3.5E-75  532.3  44.5  437   30-474    39-523 (534)
 26 PF00067 p450:  Cytochrome P450 100.0 1.7E-71 3.6E-76  541.5  31.7  430   33-471     1-463 (463)
 27 PLN02655 ent-kaurene oxidase   100.0 4.8E-70   1E-74  525.3  39.4  428   33-475     1-464 (466)
 28 PLN02738 carotene beta-ring hy 100.0 1.1E-69 2.3E-74  531.9  38.8  411   55-475   151-595 (633)
 29 PLN02936 epsilon-ring hydroxyl 100.0   3E-68 6.4E-73  515.0  38.6  434   32-475    13-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.2E-66 2.6E-71  502.7  41.7  417   39-475    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 3.4E-63 7.4E-68  471.0  29.4  405   28-453    14-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0   1E-58 2.2E-63  435.7  30.5  379   58-475    25-411 (411)
 33 PF12508 DUF3714:  Protein of u  76.1    0.85 1.8E-05   38.0  -0.0   43  337-380    52-94  (200)
 34 PF05952 ComX:  Bacillus compet  59.8     9.7 0.00021   24.3   2.3   19  297-315     4-22  (57)
 35 PF12554 MOZART1:  Mitotic-spin  54.2      45 0.00097   20.5   4.4   42  275-316     6-47  (48)
 36 PHA03049 IMV membrane protein;  53.1      47   0.001   21.8   4.5   27   13-39     13-39  (68)
 37 PF01102 Glycophorin_A:  Glycop  47.2      15 0.00032   27.9   2.0    6   20-25     86-91  (122)
 38 PF09201 SRX:  SRX;  InterPro:   44.4      19 0.00041   27.7   2.1   23  421-443    18-40  (148)
 39 PRK06789 flagellar motor switc  43.4      27 0.00058   23.8   2.5   38  344-381    22-62  (74)
 40 PF14483 Cut8_M:  Cut8 dimerisa  38.9      49  0.0011   19.1   2.8   22  293-314    13-35  (38)
 41 PF14129 DUF4296:  Domain of un  36.5 1.5E+02  0.0033   20.9   7.3   51  271-321    29-79  (87)
 42 PF12444 Sox_N:  Sox developmen  35.6      30 0.00066   24.2   1.9   20  431-450    60-79  (84)
 43 TIGR03779 Bac_Flav_CT_M Bacter  35.6      12 0.00025   35.2  -0.2   44  337-381   255-298 (410)
 44 PF05261 Tra_M:  TraM protein,   34.6   2E+02  0.0043   21.9   6.0   63  228-290    10-80  (127)
 45 PF05084 GRA6:  Granule antigen  33.8      70  0.0015   25.2   3.8   30    6-37    154-183 (215)
 46 PF05961 Chordopox_A13L:  Chord  33.7 1.4E+02   0.003   19.8   4.4   19   17-35     17-35  (68)
 47 PF15330 SIT:  SHP2-interacting  30.9 1.1E+02  0.0025   22.7   4.4   11   39-49     46-56  (107)
 48 PF14550 Peptidase_U35_2:  Puta  29.7      39 0.00083   25.8   1.8   22  359-380    71-92  (122)
 49 PRK13713 conjugal transfer pro  28.8 2.6E+02  0.0055   21.1   6.4   60  228-287     3-70  (118)
 50 KOG3653 Transforming growth fa  28.2      99  0.0021   29.8   4.5   37   65-102   220-256 (534)
 51 PHA03162 hypothetical protein;  28.1      36 0.00078   25.9   1.3   24  417-440     2-25  (135)
 52 TIGR00589 ogt O-6-methylguanin  27.9 1.8E+02   0.004   20.2   4.8   60  307-370     2-66  (80)
 53 COG0851 MinE Septum formation   27.9 1.7E+02  0.0037   20.7   4.5   18  305-322    35-52  (88)
 54 PF11227 DUF3025:  Protein of u  27.5      40 0.00087   28.4   1.7   23  380-402   188-211 (212)
 55 PF01405 PsbT:  Photosystem II   26.1 1.2E+02  0.0025   16.3   3.3   16    1-16      1-16  (29)
 56 PRK11875 psbT photosystem II r  25.9 1.2E+02  0.0027   16.4   3.1   15    1-15      1-15  (31)
 57 KOG3506 40S ribosomal protein   25.7      32 0.00069   21.6   0.6   11  414-424    12-22  (56)
 58 PF15240 Pro-rich:  Proline-ric  25.3      50  0.0011   27.0   1.8   11    1-11      1-11  (179)
 59 PF05568 ASFV_J13L:  African sw  23.1      81  0.0018   24.4   2.4   17   10-26     40-56  (189)
 60 CHL00031 psbT photosystem II p  22.9 1.5E+02  0.0032   16.4   2.7   14    1-14      1-14  (33)
 61 PF07172 GRP:  Glycine rich pro  22.4 1.2E+02  0.0025   22.0   3.0   11    1-11      1-11  (95)
 62 PF02663 FmdE:  FmdE, Molybdenu  22.3      77  0.0017   24.5   2.3   22  421-442     5-26  (131)
 63 PHA02681 ORF089 virion membran  21.3 2.9E+02  0.0063   19.2   6.4   18    9-26     10-27  (92)
 64 PRK05933 type III secretion sy  21.1      96  0.0021   28.1   2.8   43  339-381   316-362 (372)
 65 PF07886 BA14K:  BA14K-like pro  20.8      77  0.0017   17.4   1.4   17  408-424    15-31  (31)

No 1  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=9.2e-80  Score=592.32  Aligned_cols=459  Identities=24%  Similarity=0.511  Sum_probs=375.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCC
Q 011873            1 MEFIILSLLLLSLALYSLYYVIIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGA   80 (475)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~   80 (475)
                      |++.++.++++.+.+++++..+......+++.||||+++|++||++.+.     ++...++.+++++||+ +|++++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~   74 (463)
T PLN02774          1 VLLVVLGVLVIIVCLCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEFL-----KQGPDFMKNQRLRYGS-FFKSHILGC   74 (463)
T ss_pred             CeEEehhHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCchhhHHHHH-----HhhHHHHHHHHHHhcc-CccceecCC
Confidence            3444455555555555555554444545667899999999999998876     5567789999999999 999999999


Q ss_pred             cEEEecCcccchhhhccCCcccccCchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHH-HHHHHHHHHHHHHH
Q 011873           81 DMVFLCSAEGNKLLFSNEHKLFKPWLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRR-YVGMMDANAKRHLR  158 (475)
Q Consensus        81 ~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~l~  158 (475)
                      ++++++||+++++++.++...+.+........++|.++++. +|+.|+.+|+++++.|+...++. +.+.+.+.+.+.++
T Consensus        75 ~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (463)
T PLN02774         75 PTIVSMDPELNRYILMNEGKGLVPGYPQSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLS  154 (463)
T ss_pred             CeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987765554444444445677656777 99999999999999999988886 78989988888888


Q ss_pred             hhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHH
Q 011873          159 KYWDGNDVVKVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMI  238 (475)
Q Consensus       159 ~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i  238 (475)
                      + |..++++|+.+.+..+++++++.++||........++.+.+..+......++.++|....++..++++.+.+++.+.+
T Consensus       155 ~-~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i  233 (463)
T PLN02774        155 G-WDGLKTIDIQEKTKEMALLSALKQIAGTLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLI  233 (463)
T ss_pred             h-hCCCCCEEeeHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHH
Confidence            5 666678999999999999999999999865544444555554444333445556665555666778888889999998


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011873          239 KQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQME  318 (475)
Q Consensus       239 ~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~  318 (475)
                      ++++++   +  ...+|+++.++... .++..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|+++
T Consensus       234 ~~r~~~---~--~~~~d~l~~ll~~~-~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~  307 (463)
T PLN02774        234 QERRAS---G--ETHTDMLGYLMRKE-GNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLA  307 (463)
T ss_pred             HHHHhc---C--CCcccHHHHHHhCc-cCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            887643   1  23479999998743 22335899999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCC
Q 011873          319 IANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKF  398 (475)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  398 (475)
                      +.+..+++..++++++++||||+|||+|+||++||++.+.|.+.+|++++||.||||+.|+++.+++|+||++|+||++|
T Consensus       308 ~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F  387 (463)
T PLN02774        308 IRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTF  387 (463)
T ss_pred             HHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhcc
Confidence            97533234578999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC-CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeee
Q 011873          399 DPSRYQGNDI-VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       399 ~P~R~~~~~~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      +||||++++. ....|+|||+|+|.|||+++|.+|+++++|.|+++|+|++.++.. ....++..|++|++|++++
T Consensus       388 ~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~-~~~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        388 NPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK-LMKFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             CchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc-cccCCCCCCCCCceEEeee
Confidence            9999997542 234699999999999999999999999999999999999976543 3344567799999999875


No 2  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.6e-79  Score=592.95  Aligned_cols=441  Identities=29%  Similarity=0.534  Sum_probs=357.7

Q ss_pred             cCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCccccc
Q 011873           25 PKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP  104 (475)
Q Consensus        25 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~  104 (475)
                      ...++.+.||||+++|++||+..+......+.++.++.+++++||+ +|++++++.++++++||+++++++.+++..|..
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~  110 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGK-IYRSNLFGEPTIVSADAGLNRFILQNEGRLFEC  110 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcc-cccccccCCCeEEecCHHHHHHHHhCCCCeEEe
Confidence            3445667899999999999987654221124577889999999999 999999999999999999999999987766654


Q ss_pred             CchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHH-HHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHH
Q 011873          105 WLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRR-YVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCS  182 (475)
Q Consensus       105 ~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~  182 (475)
                      ..+......+|..+++. +|+.|+++|+++++.|+..+++. +.+.+.+.+...++. |..++.+|+.+.++.+++++++
T Consensus       111 ~~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~vi~  189 (490)
T PLN02500        111 SYPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDS-WKENSTFSAQDEAKKFTFNLMA  189 (490)
T ss_pred             eCchHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH-hCCCCCEEehHHHHHHHHHHHH
Confidence            44444444566446777 99999999999999999988987 567777877777774 6666789999999999999999


Q ss_pred             HHhhcCCCCc-hhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc-CCCcccHHHHH
Q 011873          183 ELMYNIHDTR-TADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR-EPEHKDILSLL  260 (475)
Q Consensus       183 ~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~l  260 (475)
                      .++||.+.+. ...++...+..+.......+.++|...+++..++.+.+.+++.+++++++++.+++. .....|+++.+
T Consensus       190 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l  269 (490)
T PLN02500        190 KHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWV  269 (490)
T ss_pred             HHHhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHH
Confidence            9999986542 223333334333333222334455544566667788899999999998876544322 12346899999


Q ss_pred             HhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccC--CCCCCCChhhhccCc
Q 011873          261 LLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSK--GPDELLSFDDLKRMK  338 (475)
Q Consensus       261 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~--~~~~~~~~~~l~~lp  338 (475)
                      ++..     .++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|+++++...  ..+..++++++++||
T Consensus       270 l~~~-----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lp  344 (490)
T PLN02500        270 LKHS-----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKME  344 (490)
T ss_pred             Hhcc-----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCH
Confidence            8632     389999999999999999999999999999999999999999999999987421  123468999999999


Q ss_pred             cHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCC----------
Q 011873          339 YTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI----------  408 (475)
Q Consensus       339 ~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~----------  408 (475)
                      ||+|||+|+||++|+++.++|.+++|++++||.||||+.|+++.+++||||++|+||++|+||||++++.          
T Consensus       345 yl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~  424 (490)
T PLN02500        345 FTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSA  424 (490)
T ss_pred             HHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCC
Confidence            9999999999999999988899999999999999999999999999999999999999999999997531          


Q ss_pred             CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeee
Q 011873          409 VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       409 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      .+..|+|||+|+|.|||+++|++|+++++|+|+++|+|++.++..... .+...+.++++|++++
T Consensus       425 ~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~l~~~~~~  488 (490)
T PLN02500        425 TTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FPFVDFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cccccCCCCceEEEEe
Confidence            346899999999999999999999999999999999999876544333 2344666899999986


No 3  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.5e-79  Score=575.17  Aligned_cols=412  Identities=22%  Similarity=0.380  Sum_probs=342.4

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-  107 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-  107 (475)
                      +.++||||++||++||++++..    ..++..+.++.++||+ +|.+++|..++|||+|+++++|++++++..|+++.. 
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~----~~~h~~~~~ls~~yGp-i~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGS----LPPHRSFRKLSKKYGP-VFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCC-eEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            4889999999999999999983    2499999999999999 999999999999999999999999999988887764 


Q ss_pred             hhh-hhhc-CCCCCCC--CchHHHHHHHHh-hccCChhHHHHHHHHHHHHHHHHHHhhhc--CCCcEEehhhHHHHHHHH
Q 011873          108 RII-ENSF-KSSPNIT--LQDEFNSLRRVI-GSFTEPNALRRYVGMMDANAKRHLRKYWD--GNDVVKVHDLSRKFIFAL  180 (475)
Q Consensus       108 ~~~-~~~~-g~~~~~~--~~~~~~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~--~~~~vd~~~~~~~~~~~~  180 (475)
                      ... ..+. |..++++  +|+.|+.+||.. ...++...++++...-.++++..++...+  .+++||+...+..++.++
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHH
Confidence            222 3333 4446665  899999999998 55677777888777778888877775442  227999999999999999


Q ss_pred             HHHHhhcCCCCch----hHHHHHHHHHHHhhhh------hcC---cCCCCc-cc-chhhhhhhHHHHHHHHHHHHHHHHH
Q 011873          181 CSELMYNIHDTRT----ADELENLAHCIMTEFF------IIP---VNIPGT-KF-GRAVRAGREFHQRFRNMIKQRRLEI  245 (475)
Q Consensus       181 ~~~~~fG~~~~~~----~~~~~~~~~~~~~~~~------~~~---~~~p~~-~~-~~~~~~~~~~~~~~~~~i~~~~~~~  245 (475)
                      +++++||......    ..++.+........+.      .+|   .+++.. .. ++......++.++++++|+++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999976542    2224444443332221      122   122311 12 2233444558899999999998765


Q ss_pred             hhccCCCcccHHHHHHhhhccCCCC-CCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCC
Q 011873          246 EEKREPEHKDILSLLLLEKNKDGED-LTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKG  324 (475)
Q Consensus       246 ~~~~~~~~~d~~~~ll~~~~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~  324 (475)
                       +.  +...|+++.++...++++.. ++++++...+..+++||+|||++|+.|++.+|+.||++|+|+++||+++++   
T Consensus       259 -~~--~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG---  332 (489)
T KOG0156|consen  259 -GD--EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG---  332 (489)
T ss_pred             -cc--CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---
Confidence             21  22389999999886644433 899999999999999999999999999999999999999999999999984   


Q ss_pred             CCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCC
Q 011873          325 PDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRY  403 (475)
Q Consensus       325 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~  403 (475)
                      .++.++.+|+.+||||+|||+|++|+||++| .++|.+++|++|+||.|||||.|+++.|++|+||++|+||++|+||||
T Consensus       333 ~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERF  412 (489)
T KOG0156|consen  333 KGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERF  412 (489)
T ss_pred             CCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhh
Confidence            4566999999999999999999999999999 668999999999999999999999999999999999999999999999


Q ss_pred             CCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecC
Q 011873          404 QGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP  451 (475)
Q Consensus       404 ~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~  451 (475)
                      ++++   .....++|||.|+|.|||..+|.+++.+++|.|+++|||+..++
T Consensus       413 l~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  413 LDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             cCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            9962   35788999999999999999999999999999999999998755


No 4  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4.1e-77  Score=581.40  Aligned_cols=448  Identities=28%  Similarity=0.511  Sum_probs=372.0

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcC-cceeeccCCCcEEEecCcccchhhhccCCccccc
Q 011873           26 KPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSS-KIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP  104 (475)
Q Consensus        26 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~-~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~  104 (475)
                      ...+.++||||+++|++|+++.+....+..+++.++.+++++||+ ++|++++++.+.++++||+++++++.+++ .|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            334567899999999999999886533335789999999999997 27899999999999999999999998764 4554


Q ss_pred             CchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHH
Q 011873          105 WLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTE-PNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCS  182 (475)
Q Consensus       105 ~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~-~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~  182 (475)
                      ..+......+|..++.. +|+.|+++|+.+++.|+ .++++.+.+.+.+.+.+.+++ +.+++.+|+.++++.+++++++
T Consensus       116 ~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~vi~  194 (490)
T PLN02302        116 GWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEK-WSKMGEIEFLTELRKLTFKIIM  194 (490)
T ss_pred             CCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH-hcCCCCEehHHHHHHHHHHHHH
Confidence            44333334567655666 99999999999999995 678999999999999999985 5555679999999999999999


Q ss_pred             HHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHh
Q 011873          183 ELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLL  262 (475)
Q Consensus       183 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~  262 (475)
                      +++||.+......++...+..+...+..++..+|.....+..++++.+.+++.+.++++++....+......|+++.+++
T Consensus       195 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~  274 (490)
T PLN02302        195 YIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLD  274 (490)
T ss_pred             HHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHh
Confidence            99999876544444444443333333333334554444556677788899999999988765443322345799999998


Q ss_pred             hhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCC-CCCCChhhhccCccHH
Q 011873          263 EKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGP-DELLSFDDLKRMKYTW  341 (475)
Q Consensus       263 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~-~~~~~~~~l~~lp~l~  341 (475)
                      ..++++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+..++ ...++++++++||||+
T Consensus       275 ~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~  354 (490)
T PLN02302        275 AEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLS  354 (490)
T ss_pred             hhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHH
Confidence            755555568999999999999999999999999999999999999999999999999753222 2237899999999999


Q ss_pred             HHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 011873          342 NVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPH  421 (475)
Q Consensus       342 a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r  421 (475)
                      |||+|+||++|+++...|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++.+..+..++|||+|+|
T Consensus       355 a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G~r  434 (490)
T PLN02302        355 QVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLGSR  434 (490)
T ss_pred             HHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCCCCCCccCCCCCCc
Confidence            99999999999999888999999999999999999999999999999999999999999999986556678999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          422 ICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       422 ~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      .|+|+++|.+|++++++.|+++|+|++.++.....+.+...|.+++.+++++|+
T Consensus       435 ~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        435 LCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKVA  488 (490)
T ss_pred             CCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEecc
Confidence            999999999999999999999999999876555666677999999999999885


No 5  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.4e-77  Score=573.93  Aligned_cols=448  Identities=31%  Similarity=0.554  Sum_probs=371.6

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcc
Q 011873           10 LLSLALYSLYYVIIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAE   89 (475)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~   89 (475)
                      +++++++.++........++.+.||||+++|++||+..+..    ++++.++.+++++||+ +|++++++.++++++||+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~-i~~~~~~~~~~v~v~~p~   88 (463)
T PLN02196         14 ALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYS----QDPNVFFASKQKRYGS-VFKTHVLGCPCVMISSPE   88 (463)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHh----cCHHHHHHHHHHHhhh-hheeeecCCceEEEcCHH
Confidence            33333333333333344456678999999999999887653    6789999999999999 999999999999999999


Q ss_pred             cchhhhccCCcccccCchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEE
Q 011873           90 GNKLLFSNEHKLFKPWLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVK  168 (475)
Q Consensus        90 ~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd  168 (475)
                      ++++++.++...+++.........+|..+++. +|+.|+++|+++++.|+.++++.+.+.+.+.+.+.+++ |. +++++
T Consensus        89 ~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~-~~-~~~v~  166 (463)
T PLN02196         89 AAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNS-WE-GTQIN  166 (463)
T ss_pred             HHHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHc-CC-CCeEE
Confidence            99999987766666544333344567657777 99999999999999999999999999999999998885 54 45799


Q ss_pred             ehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhc
Q 011873          169 VHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEK  248 (475)
Q Consensus       169 ~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  248 (475)
                      +.+++..+++++++.++||.+......++...+..+...+..++..+|....++..++.+.+.+++.+.+++++++.   
T Consensus       167 ~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~---  243 (463)
T PLN02196        167 TYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNG---  243 (463)
T ss_pred             eHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC---
Confidence            99999999999999999998754333344444433333333345556654456677788888899988888776431   


Q ss_pred             cCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCC
Q 011873          249 REPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDEL  328 (475)
Q Consensus       249 ~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~  328 (475)
                        ....|+++.+++.    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+..+.++.
T Consensus       244 --~~~~d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~  317 (463)
T PLN02196        244 --SSHNDLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGES  317 (463)
T ss_pred             --CCcccHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCC
Confidence              2356899988853    2348999999999999999999999999999999999999999999999998864444567


Q ss_pred             CChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCC
Q 011873          329 LSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI  408 (475)
Q Consensus       329 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  408 (475)
                      ++++++++||||+||++|+||++|+++...|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+++ .
T Consensus       318 ~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~-~  396 (463)
T PLN02196        318 LTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA-P  396 (463)
T ss_pred             CCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC-C
Confidence            899999999999999999999999999888999999999999999999999999999999999999999999999974 3


Q ss_pred             CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeeeC
Q 011873          409 VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       409 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  474 (475)
                      .+..++|||+|+|.|+|+++|++|+++++|.|+++|+|++.+++....+..+..|++++.|++++.
T Consensus       397 ~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCceEEcccccCCCCceEEEecC
Confidence            467899999999999999999999999999999999999986655566777788999999999864


No 6  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-77  Score=553.42  Aligned_cols=441  Identities=22%  Similarity=0.335  Sum_probs=341.7

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc
Q 011873           27 PTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL  106 (475)
Q Consensus        27 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  106 (475)
                      ...++-.|+|+++|++||+..+...   .....+..+.+.+||+ ++.+..+-.+.++|+||+.+++|+.+.-..|.++.
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~---~~~~~~~~~~~~~~~~-~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~  102 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKR---ERPGDLLLDIYTKYRP-VVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRK  102 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhc---cCcHHHHHHHHhcCCC-EEEEEecCCcceEecCHHHHHHHHHHhCccCcCCC
Confidence            4455578899999999999999853   2224444455555588 99999999999999999999999997766666532


Q ss_pred             --hhhhhh-hcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCC---CcEEehhhHHHHHHH
Q 011873          107 --PRIIEN-SFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGN---DVVKVHDLSRKFIFA  179 (475)
Q Consensus       107 --~~~~~~-~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~---~~vd~~~~~~~~~~~  179 (475)
                        ...-.. -++..+++. .|+.||++|..+++.|++.+++++.+.+++.+.++++..-+..   ..+++.+.+.+++.|
T Consensus       103 ~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~D  182 (499)
T KOG0158|consen  103 RPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTD  182 (499)
T ss_pred             CCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHH
Confidence              111111 123336677 9999999999999999999999999999999988887533222   388999999999999


Q ss_pred             HHHHHhhcCCCCchh---HHHHHHHHHHHhh-hhhcCc------CCCCc-ccchhhhhhhHHHHHHHHHHHHHHHHHhhc
Q 011873          180 LCSELMYNIHDTRTA---DELENLAHCIMTE-FFIIPV------NIPGT-KFGRAVRAGREFHQRFRNMIKQRRLEIEEK  248 (475)
Q Consensus       180 ~~~~~~fG~~~~~~~---~~~~~~~~~~~~~-~~~~~~------~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  248 (475)
                      +|+.++||.+.....   .++.......... ....+.      ..|.. ..-+.........+++.+++.++.+..+..
T Consensus       183 VI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~  262 (499)
T KOG0158|consen  183 VIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKE  262 (499)
T ss_pred             HHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999654322   2222211121111 001110      11110 000111223344455555555544443222


Q ss_pred             cCCCcccHHHHHHhhhcc--CC---C-CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcc
Q 011873          249 REPEHKDILSLLLLEKNK--DG---E-DLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANS  322 (475)
Q Consensus       249 ~~~~~~d~~~~ll~~~~~--~~---~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~  322 (475)
                      . ...+|+++.+++.+.+  .+   . .+|.+|+++++..+++||.||||+|+++++|+|++|||+|+|||+||++++..
T Consensus       263 ~-~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~  341 (499)
T KOG0158|consen  263 N-IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEE  341 (499)
T ss_pred             C-CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcc
Confidence            2 4678999999988743  11   1 49999999999999999999999999999999999999999999999999752


Q ss_pred             CCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccC-ceEeCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 011873          323 KGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTID-GYTIPKGFKLHWAVNATHKDPECFPNPEKFDPS  401 (475)
Q Consensus       323 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~  401 (475)
                      .  +. +++|.+++|+||++||+||||+||+++.+.|.|++|++++ ++.||||+.|.++.+++||||++||||++|+||
T Consensus       342 ~--~~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PE  418 (499)
T KOG0158|consen  342 K--EG-LTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPE  418 (499)
T ss_pred             c--CC-CCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCc
Confidence            2  22 9999999999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             CCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-cccc---CccCCCCCCcceEeeeC
Q 011873          402 RYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIR---NPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       402 R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~---~~~~~p~~~~~v~~~~r  474 (475)
                      ||.+++   ..+..|+|||.|||.|+|.+||.+|+|+.|++||++|+++.++... ....   ..++.|++|+.+++++|
T Consensus       419 RF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r  498 (499)
T KOG0158|consen  419 RFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPR  498 (499)
T ss_pred             cCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeC
Confidence            999765   4678999999999999999999999999999999999999876211 1334   45789999999999999


Q ss_pred             C
Q 011873          475 N  475 (475)
Q Consensus       475 ~  475 (475)
                      +
T Consensus       499 ~  499 (499)
T KOG0158|consen  499 D  499 (499)
T ss_pred             C
Confidence            5


No 7  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=5.8e-77  Score=571.66  Aligned_cols=442  Identities=27%  Similarity=0.511  Sum_probs=369.5

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc
Q 011873           27 PTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL  106 (475)
Q Consensus        27 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  106 (475)
                      +++.++||||.++|++||++.+.......+++.++.+++++||+ +|++++++.+++|++||+++++++.+++..+....
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~-i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGK-VFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhh-eeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            45777899999999999999875322124688999999999999 99999999999999999999999998876666554


Q ss_pred             hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHH-HHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHH
Q 011873          107 PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRR-YVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSEL  184 (475)
Q Consensus       107 ~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~  184 (475)
                      ......++|..+++. +|+.|+++|+++++.|+..++.. +.+.+.+.+.+.+++ |..++.+++.+.+..+++++++.+
T Consensus        82 ~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~  160 (452)
T PLN03141         82 PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDS-WRDDPPVLVQDETKKIAFEVLVKA  160 (452)
T ss_pred             chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHh-ccCCCCEEhHHHHHHHHHHHHHHH
Confidence            444556677656777 99999999999999998777776 456777777777774 555678999999999999999999


Q ss_pred             hhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccC---CCcccHHHHHH
Q 011873          185 MYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKRE---PEHKDILSLLL  261 (475)
Q Consensus       185 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~d~~~~ll  261 (475)
                      +||.+......++.+.+..+...+..+|.++|.....+..++.+++.+++.++|++++++...+..   ....|+++.++
T Consensus       161 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll  240 (452)
T PLN03141        161 LISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLL  240 (452)
T ss_pred             HcCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHH
Confidence            999876544555555666555554455555665545556677889999999999988766543211   12468999998


Q ss_pred             hhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccC-CCCCCCChhhhccCccH
Q 011873          262 LEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSK-GPDELLSFDDLKRMKYT  340 (475)
Q Consensus       262 ~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~-~~~~~~~~~~l~~lp~l  340 (475)
                      +..   +..++++++..++..+++||+|||+++++|++++|+.||++|+|+++|++++.+.. ..++.++++++.+||||
T Consensus       241 ~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl  317 (452)
T PLN03141        241 RDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFT  317 (452)
T ss_pred             hcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHH
Confidence            753   23489999999999999999999999999999999999999999999999886421 22446899999999999


Q ss_pred             HHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 011873          341 WNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGP  420 (475)
Q Consensus       341 ~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~  420 (475)
                      +|||+|++|++|++++++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++++..+..|+|||+|+
T Consensus       318 ~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG~G~  397 (452)
T PLN03141        318 QNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNSSFTPFGGGQ  397 (452)
T ss_pred             HHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCCCCCCCCCCCCC
Confidence            99999999999998888999999999999999999999999999999999999999999999998755567899999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          421 HICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       421 r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |.|+|+++|.+|+++++|.|+++|+|++.+++.  ...++++|.+++.|++++|+
T Consensus       398 R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        398 RLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI--VNFPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             CCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe--eecccccCCCCceEEEEeCC
Confidence            999999999999999999999999999865432  33468899999999999995


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.1e-75  Score=573.05  Aligned_cols=439  Identities=17%  Similarity=0.284  Sum_probs=337.7

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhc-CcceeeccCCCcEEEecCcccchhhhccCCcccccCc
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYS-SKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL  106 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  106 (475)
                      ++.++||||+++|++||+..+...   ...+.++.++.++|| + +|++++|+.++++|+||+++++++.+++..|.++.
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~---~~~~~~l~~~~~~yg~~-i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp  129 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKN---RPVFRWLHSLMKELNTE-IACVRLGNTHVIPVTCPKIAREIFKQQDALFASRP  129 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccC---CcHhHHHHHHHHHhCCc-eEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCC
Confidence            466799999999999999887520   224678899999999 6 99999999999999999999999998776676554


Q ss_pred             hhhhhhhcCCC---CCCC-CchHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHhh---hcCCCcEEehhhHHHHHH
Q 011873          107 PRIIENSFKSS---PNIT-LQDEFNSLRRVIGS-FTEPNALRRYVGMMDANAKRHLRKY---WDGNDVVKVHDLSRKFIF  178 (475)
Q Consensus       107 ~~~~~~~~g~~---~~~~-~~~~~~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~---~~~~~~vd~~~~~~~~~~  178 (475)
                      .......+|.+   +++. +|+.|+++|+++++ .++....+.+.+.+.+++..+++..   ...++++|+.+.+.++++
T Consensus       130 ~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  209 (543)
T PLN02971        130 LTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCG  209 (543)
T ss_pred             cccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHH
Confidence            33333445542   2555 89999999999965 4555556667777777766555432   234568999999999999


Q ss_pred             HHHHHHhhcCCCCc--------hhHHHHHHHHHHHhhhh-----hcCcCCCCc------cc-chhhhhhhHHHHHHHHHH
Q 011873          179 ALCSELMYNIHDTR--------TADELENLAHCIMTEFF-----IIPVNIPGT------KF-GRAVRAGREFHQRFRNMI  238 (475)
Q Consensus       179 ~~~~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~~~p~~------~~-~~~~~~~~~~~~~~~~~i  238 (475)
                      ++++.++||.+...        ...+....+..+.....     .++..+|..      .. +...+..+.+.+++.+++
T Consensus       210 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        210 NAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            99999999986421        01112222222221110     111122211      11 123334566788888888


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHhhhccCCC-CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 011873          239 KQRRLEIEEKREPEHKDILSLLLLEKNKDGE-DLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQM  317 (475)
Q Consensus       239 ~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~  317 (475)
                      +++++..+++......|+++.+++..++++. .++++++.+++.++++||+|||+++++|++++|+.|||+|+|+++|++
T Consensus       290 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        290 DERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            8876644332212346999999986543332 489999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCCCCCC
Q 011873          318 EIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPE  396 (475)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  396 (475)
                      ++++   .++.++++++++|||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.|++||||++|+||+
T Consensus       370 ~v~g---~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~  446 (543)
T PLN02971        370 RVVG---KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPL  446 (543)
T ss_pred             HHhC---CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcc
Confidence            9985   35678999999999999999999999999985 6899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCccc----ccCccCCCCCC
Q 011873          397 KFDPSRYQGND------IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKM----IRNPNLMPEKG  466 (475)
Q Consensus       397 ~F~P~R~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~----~~~~~~~p~~~  466 (475)
                      +|+||||++++      ..+..|+|||+|+|.|+|++||+.|+++++|+|+++|+|++.+++...    .+. .+.-.++
T Consensus       447 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~  525 (543)
T PLN02971        447 SFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKP  525 (543)
T ss_pred             ccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-ccccccc
Confidence            99999999753      234579999999999999999999999999999999999987643221    223 4423346


Q ss_pred             cceEeeeC
Q 011873          467 LPVRLYPN  474 (475)
Q Consensus       467 ~~v~~~~r  474 (475)
                      +.|.+++|
T Consensus       526 ~~~~~~~~  533 (543)
T PLN02971        526 LVMVGELR  533 (543)
T ss_pred             ceeeeeec
Confidence            88888877


No 9  
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.4e-74  Score=552.00  Aligned_cols=464  Identities=30%  Similarity=0.516  Sum_probs=363.6

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCC
Q 011873            1 MEFIILSLLLLSLALYSLYYVIIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGA   80 (475)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~   80 (475)
                      |++-...+++.++ .+++.++..+.+..+.++||||.++|++||++.+.......++..++.+++++||+ +|++++++.
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~l~~~   78 (472)
T PLN02987          1 MAFSAFLLLLSSL-AAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGS-LFMTHLFGE   78 (472)
T ss_pred             CcHHHHHHHHHHH-HHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhch-hhhhhhcCC
Confidence            3443333333333 33333344445566777899999999999998874211114688889999999999 999999999


Q ss_pred             cEEEecCcccchhhhccCCcccccCchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHH-HHHHHHHHHHH
Q 011873           81 DMVFLCSAEGNKLLFSNEHKLFKPWLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVG-MMDANAKRHLR  158 (475)
Q Consensus        81 ~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~-~~~~~~~~~l~  158 (475)
                      ++++|+||+++++++.+++..|..........++|..++++ +|+.|+++|+++.+.++.+.++.+.. .+.+.+...++
T Consensus        79 ~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  158 (472)
T PLN02987         79 PTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLD  158 (472)
T ss_pred             CeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998776665444344456677657888 99999999999876444455555432 23344444454


Q ss_pred             hhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHH
Q 011873          159 KYWDGNDVVKVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMI  238 (475)
Q Consensus       159 ~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i  238 (475)
                      . |.  +++++.+.+++++++++++++||.+.....+.+.+.+......+...+.......+++..++++++.+++.+++
T Consensus       159 ~-~~--~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i  235 (472)
T PLN02987        159 S-WS--SRVLLMEEAKKITFELTVKQLMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVV  235 (472)
T ss_pred             h-hc--cceehHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            3 43  47899999999999999999999866544444444444443333222211112235667778899999999999


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011873          239 KQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQME  318 (475)
Q Consensus       239 ~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~  318 (475)
                      +++++....+. ....|+++.+++..  +  .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       236 ~~r~~~~~~~~-~~~~d~l~~ll~~~--~--~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~  310 (472)
T PLN02987        236 MKRRKEEEEGA-EKKKDMLAALLASD--D--GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEK  310 (472)
T ss_pred             HHHHhhhhccC-cccccHHHHHHhcC--C--CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            99876543321 23579999999753  1  3899999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCC
Q 011873          319 IANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKF  398 (475)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  398 (475)
                      +....+.+..++++++.+|||++||++|+||++|+++.++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|
T Consensus       311 ~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F  390 (472)
T PLN02987        311 IRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTF  390 (472)
T ss_pred             HHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCcccc
Confidence            87543334568999999999999999999999999988889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          399 DPSRYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       399 ~P~R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +||||++++   .....++|||+|+|.|||+++|.+|++++++.|+++|+|++.+++ .....++++|.+++.+++++|+
T Consensus       391 ~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        391 NPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-KLVFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-ceeecccccCCCCceEEEEecc
Confidence            999999753   234679999999999999999999999999999999999987544 3455678999999999999985


No 10 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=4.1e-75  Score=568.79  Aligned_cols=440  Identities=20%  Similarity=0.281  Sum_probs=348.0

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccc--------------cCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhh
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSK--------------KGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLL   94 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~--------------~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i   94 (475)
                      .+..||||+++|++||+..+.....              ..+....+.+|+++||+ +|++++++.++++++||++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~v~~i  118 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGK-RFIYWNGTEPRLCLTETELIKEL  118 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCC-eEEEccCCccEEEECCHHHHHHH
Confidence            4557999999999999988753100              02233457889999999 99999999999999999999999


Q ss_pred             hccCCcccccCchh--hhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc---C-CCcE
Q 011873           95 FSNEHKLFKPWLPR--IIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD---G-NDVV  167 (475)
Q Consensus        95 ~~~~~~~~~~~~~~--~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~---~-~~~v  167 (475)
                      +.++...+......  .....+|. +++. +|+.|+++|+++++.|+..+++.+.+.+.+++.++++.+.+   . +.++
T Consensus       119 l~~~~~~~~r~~~~~~~~~~~~g~-~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        119 LTKYNTVTGKSWLQQQGTKHFIGR-GLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             HhcCCCCCCCcchhhhHHHHHhcC-CccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            98764333322211  12234565 7777 99999999999999999999999999999999888885321   2 3579


Q ss_pred             EehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHh---hh---hhcCc--CCCCcccchhhhhhhHHHHHHHHHHH
Q 011873          168 KVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMT---EF---FIIPV--NIPGTKFGRAVRAGREFHQRFRNMIK  239 (475)
Q Consensus       168 d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~---~~---~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~  239 (475)
                      |+.++++.+++++++.++||.+.... +++...+..+..   ..   ..+|.  ++|....++..+..+.+.+++.+.++
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  276 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKG-KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQ  276 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875422 222222221111   11   01121  23322223334456778888899998


Q ss_pred             HHHHHHhhcc-CCCcccHHHHHHhhhcc---CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHH
Q 011873          240 QRRLEIEEKR-EPEHKDILSLLLLEKNK---DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLRE  315 (475)
Q Consensus       240 ~~~~~~~~~~-~~~~~d~~~~ll~~~~~---~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E  315 (475)
                      ++++..+.+. .....|+++.+++...+   ++..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~E  356 (516)
T PLN02290        277 SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAE  356 (516)
T ss_pred             HHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            8876544321 12357899999975432   2224789999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCC-CC
Q 011873          316 QMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECF-PN  394 (475)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~d  394 (475)
                      ++++++    +..++++++++||||+|||+||||++||++.++|.+.+|++++||.|||||.|.++.+++|+||++| +|
T Consensus       357 i~~v~~----~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~d  432 (516)
T PLN02290        357 VAEVCG----GETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKD  432 (516)
T ss_pred             HHHHhC----CCCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCC
Confidence            999985    2378999999999999999999999999998899999999999999999999999999999999999 89


Q ss_pred             CCCCCCCCCCCCC-CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccccCccCCCCCCcceEee
Q 011873          395 PEKFDPSRYQGND-IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       395 p~~F~P~R~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~v~~~  472 (475)
                      |++|+||||++++ .....|+|||.|+|.|||+++|++|++++++.|+++|+|++.++.. ......++.|+++++|+++
T Consensus       433 P~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  512 (516)
T PLN02290        433 ANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLK  512 (516)
T ss_pred             hhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCeEEEE
Confidence            9999999999653 2345799999999999999999999999999999999999875422 2223568889999999999


Q ss_pred             eCC
Q 011873          473 PNN  475 (475)
Q Consensus       473 ~r~  475 (475)
                      +|+
T Consensus       513 ~~~  515 (516)
T PLN02290        513 PLN  515 (516)
T ss_pred             eCC
Confidence            996


No 11 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=7.2e-75  Score=565.59  Aligned_cols=452  Identities=24%  Similarity=0.354  Sum_probs=353.9

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccch
Q 011873           13 LALYSLYYVIIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNK   92 (475)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~   92 (475)
                      +.++++++...+.++++.++||||.++|++||+..+.     .+++.++.+|+++||+ +|++++++.++++++||++++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~~p~~~~   89 (517)
T PLN02687         16 VLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG-----PKPHHTMAALAKTYGP-LFRLRFGFVDVVVAASASVAA   89 (517)
T ss_pred             HHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC-----CchhHHHHHHHHHhCC-eeEEecCCceEEEeCCHHHHH
Confidence            3333333333334445667899999999999998875     5688999999999999 999999999999999999999


Q ss_pred             hhhccCCcccccCchhhhhhhc---CCCCCCC-CchHHHHHHHHhh-ccCChhHHHHHHHHHHHHHHHHHHhhh--cCCC
Q 011873           93 LLFSNEHKLFKPWLPRIIENSF---KSSPNIT-LQDEFNSLRRVIG-SFTEPNALRRYVGMMDANAKRHLRKYW--DGND  165 (475)
Q Consensus        93 ~i~~~~~~~~~~~~~~~~~~~~---g~~~~~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~--~~~~  165 (475)
                      +++.++...|..+........+   +.++++. +|+.|+++|++++ +.|+.++++++.+.+.+++.++++.+.  .+++
T Consensus        90 ~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  169 (517)
T PLN02687         90 QFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTA  169 (517)
T ss_pred             HHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCC
Confidence            9998766556544322211122   2334555 7999999999998 799999999999999999998887532  2456


Q ss_pred             cEEehhhHHHHHHHHHHHHhhcCCCC-----chhHHHHHHHHHHHhhhh------hcCc--CCCCc-ccchhhhhhhHHH
Q 011873          166 VVKVHDLSRKFIFALCSELMYNIHDT-----RTADELENLAHCIMTEFF------IIPV--NIPGT-KFGRAVRAGREFH  231 (475)
Q Consensus       166 ~vd~~~~~~~~~~~~~~~~~fG~~~~-----~~~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~~~~  231 (475)
                      ++|+.+++..+++++++.++||....     +...++.+.+..+.....      .+|.  +++.. ..++..+..+.+.
T Consensus       170 ~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~  249 (517)
T PLN02687        170 PVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFD  249 (517)
T ss_pred             ceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHH
Confidence            89999999999999999999998632     122334444433322111      1121  12111 1234455667788


Q ss_pred             HHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhcc-----CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCH
Q 011873          232 QRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNK-----DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELP  306 (475)
Q Consensus       232 ~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  306 (475)
                      +++.++++++++....+. ....|+++.+++..++     ++..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       250 ~~~~~~i~~r~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P  328 (517)
T PLN02687        250 AMMNGIIEEHKAAGQTGS-EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHP  328 (517)
T ss_pred             HHHHHHHHHHHHhccccC-cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCH
Confidence            888888888876543211 2356999999976532     2345999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEecccc
Q 011873          307 EIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNAT  385 (475)
Q Consensus       307 ~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~  385 (475)
                      ++|+|+++|++++++   .++.++.+++++||||+|||+|+||++||++. ++|.+.+|++++||.||||+.|.++.+++
T Consensus       329 ~~~~kl~~Ei~~~~~---~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~  405 (517)
T PLN02687        329 DILKKAQEELDAVVG---RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAI  405 (517)
T ss_pred             HHHHHHHHHHHHHcC---CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHh
Confidence            999999999999874   34578999999999999999999999999995 78999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCC--------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc--cc
Q 011873          386 HKDPECFPNPEKFDPSRYQGND--------IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE--KM  455 (475)
Q Consensus       386 ~~d~~~~~dp~~F~P~R~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~--~~  455 (475)
                      |+||++|+||++|+||||++++        ..+..|+|||+|+|.|+|+++|++|+++++|+|+++|+|++.++..  ..
T Consensus       406 h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  485 (517)
T PLN02687        406 ARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKL  485 (517)
T ss_pred             cCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccC
Confidence            9999999999999999999742        1245799999999999999999999999999999999999875422  12


Q ss_pred             ----ccCccCCCCCCcceEeeeC
Q 011873          456 ----IRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       456 ----~~~~~~~p~~~~~v~~~~r  474 (475)
                          .....+.+..++.|++++|
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        486 NMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             CcccccceeeecCCCeEEeeccC
Confidence                1223445566788888887


No 12 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=8.6e-76  Score=563.45  Aligned_cols=437  Identities=27%  Similarity=0.468  Sum_probs=355.8

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCc--ccccCc
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHK--LFKPWL  106 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~--~~~~~~  106 (475)
                      ....||||.++|++|++..+....  .+...++.++..+||+ +|+.+++|.++++++||+.+++|+.++..  .+.+.+
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~  109 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGP-IFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDY  109 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCc-hhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhH
Confidence            567899999999999999997432  4678889999999998 99999999999999999999999964332  233455


Q ss_pred             hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHh-hhc-CCCcEEehhhHHHHHHHHHHH
Q 011873          107 PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRK-YWD-GNDVVKVHDLSRKFIFALCSE  183 (475)
Q Consensus       107 ~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~-~~~-~~~~vd~~~~~~~~~~~~~~~  183 (475)
                      +..+.+++|. |+++ +|+.|.++|++++++|+.+.++.+...+.+.+...+.. .+. .+..+|+.+.++++++++++.
T Consensus       110 ~~~~~~~lG~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  110 PESLKPWLGD-GLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHHHHhcC-ccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            5678899999 8888 99999999999999999999999999888887765543 222 333499999999999999999


Q ss_pred             HhhcCCC-CchhH---HHHHHHHHHHhhhhhcCcCCC-Cc-------ccchhhhhhhHHHHHHHHHHHHHHHHHhhccC-
Q 011873          184 LMYNIHD-TRTAD---ELENLAHCIMTEFFIIPVNIP-GT-------KFGRAVRAGREFHQRFRNMIKQRRLEIEEKRE-  250 (475)
Q Consensus       184 ~~fG~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~p-~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  250 (475)
                      +++|... .....   ++...+..... ....+...| ..       ..++..++.+.+.+.++++|++|+++..++.. 
T Consensus       189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  189 TAMGPESLDAEGPELFEYVQAFDDLTE-LISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             HhcCCccccccCCcccHHHHHHHHHHH-HHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9999322 21222   33333332222 222222223 11       23445678899999999999999987765432 


Q ss_pred             --CCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCC
Q 011873          251 --PEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDEL  328 (475)
Q Consensus       251 --~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~  328 (475)
                        ....|+++.+....+   ..++++++.+++.++++||+|||+++++|+++.|+.||++|+|+++|+.++++..+.  .
T Consensus       268 ~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~--~  342 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDD--K  342 (497)
T ss_pred             ccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCC--C
Confidence              235677775333221   559999999999999999999999999999999999999999999999999863222  2


Q ss_pred             CChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc-CceEeCCCCEEEEeccccccCCCCCC-CCCCCCCCCCCCC
Q 011873          329 LSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYTIPKGFKLHWAVNATHKDPECFP-NPEKFDPSRYQGN  406 (475)
Q Consensus       329 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~-dp~~F~P~R~~~~  406 (475)
                      .+....++|+||++||+||||||||+|.+.|.+.+|++| +||.||||+.|.++++++|||+.+|+ ||++|+||||+++
T Consensus       343 ~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~  422 (497)
T KOG0157|consen  343 WEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDG  422 (497)
T ss_pred             CChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCC
Confidence            333333479999999999999999999999999999999 58999999999999999999999995 9999999999965


Q ss_pred             C----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCC-cccccCccCCCCCCcceEeeeCC
Q 011873          407 D----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPD-EKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       407 ~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +    .++.+|+|||+|+|.|+|++||++|+|+++++++++|+|+++.+. ......++++|.+|++|+++||.
T Consensus       423 ~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  423 EEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence            3    346899999999999999999999999999999999999998765 55667889999999999999985


No 13 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=7e-75  Score=565.56  Aligned_cols=437  Identities=19%  Similarity=0.295  Sum_probs=341.7

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP  107 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  107 (475)
                      ++.++||||+++|++|++..+.     ...+.++.+|+++||+ +|++++++.++++++||+++++++.++...|..+..
T Consensus        33 ~~~~~ppgp~~~Pl~G~l~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~  106 (516)
T PLN02183         33 RRLPYPPGPKGLPIIGNMLMMD-----QLTHRGLANLAKQYGG-LFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPA  106 (516)
T ss_pred             CCCCCCcCCCCCCeeccHHhcC-----CcchHHHHHHHHHhCC-eeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCc
Confidence            3567899999999999998764     4456788999999999 999999999999999999999999876655554322


Q ss_pred             h-hhhhhcC--CCCCCC-CchHHHHHHHH-hhccCChhHHHHHHHHHHHHHHHHHHhhh-cCCCcEEehhhHHHHHHHHH
Q 011873          108 R-IIENSFK--SSPNIT-LQDEFNSLRRV-IGSFTEPNALRRYVGMMDANAKRHLRKYW-DGNDVVKVHDLSRKFIFALC  181 (475)
Q Consensus       108 ~-~~~~~~g--~~~~~~-~~~~~~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~vd~~~~~~~~~~~~~  181 (475)
                      . ......+  ..+++. +|+.|+++|++ +++.|+...++.+.+. .+++..++++.. ..++++|+.+++..++++++
T Consensus       107 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        107 NIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             ccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHH
Confidence            1 1122222  224666 89999999998 5789999899988885 467788887643 24678999999999999999


Q ss_pred             HHHhhcCCCCchhHHHHHHHHHHHhhh------hhcCc--CC-CCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc---
Q 011873          182 SELMYNIHDTRTADELENLAHCIMTEF------FIIPV--NI-PGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR---  249 (475)
Q Consensus       182 ~~~~fG~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---  249 (475)
                      +.++||...+....++.+.+..+...+      ..+|+  ++ +....++..++.+.+.+++.+++++++++...+.   
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        186 YRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             HhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            999999876543344555444332221      11121  11 1112345556677788888888888765443221   


Q ss_pred             --CCCcccHHHHHHhhhccC-----------CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHH
Q 011873          250 --EPEHKDILSLLLLEKNKD-----------GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQ  316 (475)
Q Consensus       250 --~~~~~d~~~~ll~~~~~~-----------~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~  316 (475)
                        .....|+++.+++...++           +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence              112468999999754221           2248999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCC
Q 011873          317 MEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPE  396 (475)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  396 (475)
                      +++++   .++.++++++++||||+|||+|+|||+||++...|.+.+|++++||.|||||.|.++.+++||||++|+||+
T Consensus       346 ~~v~~---~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~  422 (516)
T PLN02183        346 ADVVG---LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPD  422 (516)
T ss_pred             HHHcC---CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcc
Confidence            99984   245689999999999999999999999999988899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC-----CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc--c----ccCccCCCCC
Q 011873          397 KFDPSRYQGNDI-----VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK--M----IRNPNLMPEK  465 (475)
Q Consensus       397 ~F~P~R~~~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~--~----~~~~~~~p~~  465 (475)
                      +|+||||++++.     ....|+|||+|+|+|+|+++|++|+++++|+|+++|+|++.++...  .    .++.+..+..
T Consensus       423 ~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (516)
T PLN02183        423 TFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRAT  502 (516)
T ss_pred             ccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCC
Confidence            999999997532     3457999999999999999999999999999999999998664321  1    1122322344


Q ss_pred             CcceEeeeC
Q 011873          466 GLPVRLYPN  474 (475)
Q Consensus       466 ~~~v~~~~r  474 (475)
                      .+.+.+++|
T Consensus       503 ~~~~~~~~r  511 (516)
T PLN02183        503 RLVAVPTYR  511 (516)
T ss_pred             CcEEEeecC
Confidence            566666666


No 14 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=6.6e-74  Score=559.10  Aligned_cols=443  Identities=21%  Similarity=0.299  Sum_probs=346.8

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP  107 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  107 (475)
                      ...++||||+++|++||+..+...  ..+++.++.+|+++||+ +|++++++.++++++||+++++++.++...|..+..
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~--~~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~  108 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNS--SADVEPLLRRLIARYGP-VVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA  108 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccc--cccHHHHHHHHHHHhCC-eEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc
Confidence            455789999999999998866421  14578899999999999 999999999999999999999999877666654432


Q ss_pred             hhhhhhcCCC--CCC-C-CchHHHHHHH-HhhccCChhHHHHHHHHHHHHHHHHHHhhhc---CCCcEEehhhHHHHHHH
Q 011873          108 RIIENSFKSS--PNI-T-LQDEFNSLRR-VIGSFTEPNALRRYVGMMDANAKRHLRKYWD---GNDVVKVHDLSRKFIFA  179 (475)
Q Consensus       108 ~~~~~~~g~~--~~~-~-~~~~~~~~R~-~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~---~~~~vd~~~~~~~~~~~  179 (475)
                      .....++|.+  .+. . +|+.|+++|| ++++.|+.++++++.+.+.+.+.++++.+.+   .++.+|+.+.+..++.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~  188 (519)
T PLN00168        109 VASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFC  188 (519)
T ss_pred             ccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence            2222344432  233 2 7999999886 6899999999999999999999888875322   23468899999999999


Q ss_pred             HHHHHhhcCCCCchh-HHHHHHHHHHHh---h----hhhcCcCCC---CcccchhhhhhhHHHHHHHHHHHHHHHHHhh-
Q 011873          180 LCSELMYNIHDTRTA-DELENLAHCIMT---E----FFIIPVNIP---GTKFGRAVRAGREFHQRFRNMIKQRRLEIEE-  247 (475)
Q Consensus       180 ~~~~~~fG~~~~~~~-~~~~~~~~~~~~---~----~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  247 (475)
                      +++.++||.+.+... ..+.........   .    ...+|.+..   ...+.+..++.+++.+++.++++++++..+. 
T Consensus       189 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (519)
T PLN00168        189 LLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHL  268 (519)
T ss_pred             HHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999998765322 222222221110   1    111221111   1112334567778889999999988764321 


Q ss_pred             ---ccC-----CCcccHHHHHHhhhc--cCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 011873          248 ---KRE-----PEHKDILSLLLLEKN--KDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQM  317 (475)
Q Consensus       248 ---~~~-----~~~~d~~~~ll~~~~--~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~  317 (475)
                         +..     ....|+++.+++...  +++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       269 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~  348 (519)
T PLN00168        269 GQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIK  348 (519)
T ss_pred             cccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence               100     114589999987542  2234599999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCCCCCC
Q 011873          318 EIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPE  396 (475)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  396 (475)
                      ++++  +..+.++++++++||||+||++|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++||||+
T Consensus       349 ~v~~--~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        349 AKTG--DDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHhC--CCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            9985  223568999999999999999999999999985 4899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC---------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccc--cCccCCCC
Q 011873          397 KFDPSRYQGND---------IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMI--RNPNLMPE  464 (475)
Q Consensus       397 ~F~P~R~~~~~---------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~--~~~~~~p~  464 (475)
                      +|+||||++++         ..+..|+|||+|+|+|||++||++|+++++|.|+++|+|++.++.. ...  ...+..|.
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  506 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMA  506 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeec
Confidence            99999999642         1245799999999999999999999999999999999999875432 221  23466778


Q ss_pred             CCcceEeeeCC
Q 011873          465 KGLPVRLYPNN  475 (475)
Q Consensus       465 ~~~~v~~~~r~  475 (475)
                      +++.|++++|+
T Consensus       507 ~~~~~~~~~R~  517 (519)
T PLN00168        507 KPLRARLVPRR  517 (519)
T ss_pred             CCcEEEEEecc
Confidence            88999999996


No 15 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=9.9e-74  Score=557.21  Aligned_cols=441  Identities=19%  Similarity=0.304  Sum_probs=347.1

Q ss_pred             ccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccc
Q 011873           24 KPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFK  103 (475)
Q Consensus        24 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~  103 (475)
                      +...++.+.||||+++|++||+..+..    .++..++.+++++||+ +|++++++.++++++||+++++++.++...|.
T Consensus        21 ~~~~~~~~~pPgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~-~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~   95 (499)
T PLN03234         21 STTKKSLRLPPGPKGLPIIGNLHQMEK----FNPQHFLFRLSKLYGP-IFTMKIGGRRLAVISSAELAKELLKTQDLNFT   95 (499)
T ss_pred             HhcCCCCCCCcCCCCCCeeccHHhcCC----CCccHHHHHHHHHcCC-eEEEEecCcCEEEECCHHHHHHHHHhCCcccc
Confidence            344456678999999999999988752    4677899999999999 99999999999999999999999987765555


Q ss_pred             cCchh-hhh--hhcCCCCCCC-CchHHHHHHHHh-hccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHH
Q 011873          104 PWLPR-IIE--NSFKSSPNIT-LQDEFNSLRRVI-GSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRK  175 (475)
Q Consensus       104 ~~~~~-~~~--~~~g~~~~~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~  175 (475)
                      .+... ...  ...|...... .++.|+++|+.+ .+.|+.++++++.+.+.+.+.+++++..   .+++++|+.+.+..
T Consensus        96 ~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~  175 (499)
T PLN03234         96 ARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLS  175 (499)
T ss_pred             CCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHH
Confidence            43221 111  1123211233 678999999985 6899999999999999999999888632   35678999999999


Q ss_pred             HHHHHHHHHhhcCCCCchh---HHHHHHHHHHHhhhh------hcCc--CCC--CcccchhhhhhhHHHHHHHHHHHHHH
Q 011873          176 FIFALCSELMYNIHDTRTA---DELENLAHCIMTEFF------IIPV--NIP--GTKFGRAVRAGREFHQRFRNMIKQRR  242 (475)
Q Consensus       176 ~~~~~~~~~~fG~~~~~~~---~~~~~~~~~~~~~~~------~~~~--~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~  242 (475)
                      +++++++.++||.+.+...   .++.+.+......+.      .+|.  .++  ....++..++.+++.+++.+++++++
T Consensus       176 ~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~  255 (499)
T PLN03234        176 FTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETL  255 (499)
T ss_pred             HHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998755332   233333222211110      1111  011  01124566778888899999998876


Q ss_pred             HHHhhccCCCcccHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 011873          243 LEIEEKREPEHKDILSLLLLEKNKDG--EDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIA  320 (475)
Q Consensus       243 ~~~~~~~~~~~~d~~~~ll~~~~~~~--~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~  320 (475)
                      +....+  ....|+++.+++..++++  ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       256 ~~~~~~--~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~  333 (499)
T PLN03234        256 DPNRPK--QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVI  333 (499)
T ss_pred             hhcccC--CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            532221  235688988886543322  2589999999999999999999999999999999999999999999999997


Q ss_pred             ccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcc-ccccccccccCceEeCCCCEEEEeccccccCCCCC-CCCCCC
Q 011873          321 NSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGT-FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECF-PNPEKF  398 (475)
Q Consensus       321 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F  398 (475)
                      +   ..+.++++++++|||++|||+|+||++||++.. +|.+.+|++++||.|||||.|.++.+++||||++| +||++|
T Consensus       334 ~---~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F  410 (499)
T PLN03234        334 G---DKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEF  410 (499)
T ss_pred             C---CCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhc
Confidence            4   345689999999999999999999999999965 79999999999999999999999999999999999 899999


Q ss_pred             CCCCCCCCCC------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCC--c--c--cccCccCCCCCC
Q 011873          399 DPSRYQGNDI------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPD--E--K--MIRNPNLMPEKG  466 (475)
Q Consensus       399 ~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~--~--~--~~~~~~~~p~~~  466 (475)
                      +||||++++.      .+..|+|||+|+|+|||+++|++|+++++|+|+++|+|++.++.  .  .  ..++....|++.
T Consensus       411 ~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (499)
T PLN03234        411 IPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEH  490 (499)
T ss_pred             CchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCC
Confidence            9999997531      35679999999999999999999999999999999999987542  1  1  122445568888


Q ss_pred             cceEeeeC
Q 011873          467 LPVRLYPN  474 (475)
Q Consensus       467 ~~v~~~~r  474 (475)
                      +.+.+++|
T Consensus       491 ~~~~~~~~  498 (499)
T PLN03234        491 LVLAPTKH  498 (499)
T ss_pred             eEEEeecC
Confidence            88887776


No 16 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.8e-73  Score=552.35  Aligned_cols=439  Identities=19%  Similarity=0.315  Sum_probs=347.6

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC
Q 011873           26 KPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        26 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      .+.+.++||||+++|++||+..+.     .+++.++.+++++||+ +|++++++.++++|+||+++++++.++...|..+
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r   99 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLLG-----NMPHVALAKMAKRYGP-VMFLKMGTNSMVVASTPEAARAFLKTLDINFSNR   99 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhcC-----CchHHHHHHHHHHhCC-eEEEEcCCccEEEECCHHHHHHHHHhcchhhcCC
Confidence            345667899999999999987765     5578899999999999 9999999999999999999999998776555544


Q ss_pred             chhh--hhhhcCC-CCCCC-CchHHHHHHHHhh-ccCChhHHHHHHHHHHHHHHHHHHhh---hcCCCcEEehhhHHHHH
Q 011873          106 LPRI--IENSFKS-SPNIT-LQDEFNSLRRVIG-SFTEPNALRRYVGMMDANAKRHLRKY---WDGNDVVKVHDLSRKFI  177 (475)
Q Consensus       106 ~~~~--~~~~~g~-~~~~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~---~~~~~~vd~~~~~~~~~  177 (475)
                      ....  .....|. .++++ +|+.|+++|+.++ +.|+.++++.+.+.+.+++.++++.+   +.+++++|+.+++..++
T Consensus       100 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~  179 (504)
T PLN00110        100 PPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSM  179 (504)
T ss_pred             CCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHH
Confidence            3221  1122332 35566 8999999999997 47999999999999888887766643   34567899999999999


Q ss_pred             HHHHHHHhhcCCC----CchhHHHHHHHHHHHhhh------hhcCc--CCCCccc-chhhhhhhHHHHHHHHHHHHHHHH
Q 011873          178 FALCSELMYNIHD----TRTADELENLAHCIMTEF------FIIPV--NIPGTKF-GRAVRAGREFHQRFRNMIKQRRLE  244 (475)
Q Consensus       178 ~~~~~~~~fG~~~----~~~~~~~~~~~~~~~~~~------~~~~~--~~p~~~~-~~~~~~~~~~~~~~~~~i~~~~~~  244 (475)
                      +++++.++||...    .....++...+.......      ..+|.  +++.... ++..+..+.+.+++.+.++++++.
T Consensus       180 ~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  259 (504)
T PLN00110        180 ANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTAS  259 (504)
T ss_pred             HHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999854    112233444443332211      11221  1121111 233445666777788888777653


Q ss_pred             HhhccCCCcccHHHHHHhhhcc-CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccC
Q 011873          245 IEEKREPEHKDILSLLLLEKNK-DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSK  323 (475)
Q Consensus       245 ~~~~~~~~~~d~~~~ll~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~  323 (475)
                      ...+  ....|+++.++..... ++..++++++.+++..+++||+|||+++++|++++|+.||++|+|+++|++++.+  
T Consensus       260 ~~~~--~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~--  335 (504)
T PLN00110        260 AHER--KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIG--  335 (504)
T ss_pred             cccc--ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC--
Confidence            3221  2346899999975432 3346999999999999999999999999999999999999999999999999975  


Q ss_pred             CCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCC
Q 011873          324 GPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSR  402 (475)
Q Consensus       324 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R  402 (475)
                       .++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||
T Consensus       336 -~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeR  414 (504)
T PLN00110        336 -RNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPER  414 (504)
T ss_pred             -CCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccc
Confidence             24568999999999999999999999999985 7899999999999999999999999999999999999999999999


Q ss_pred             CCCCCC-------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc---cccCccCCCCCCcceEee
Q 011873          403 YQGNDI-------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK---MIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       403 ~~~~~~-------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~---~~~~~~~~p~~~~~v~~~  472 (475)
                      |++++.       ....|+|||+|+|.|+|+++|++|+++++|+|+++|+|++.++...   .....++.|..++.|+++
T Consensus       415 fl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (504)
T PLN00110        415 FLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVT  494 (504)
T ss_pred             ccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeec
Confidence            996531       1247999999999999999999999999999999999998765321   123456778999999999


Q ss_pred             eCC
Q 011873          473 PNN  475 (475)
Q Consensus       473 ~r~  475 (475)
                      +|.
T Consensus       495 ~r~  497 (504)
T PLN00110        495 PRL  497 (504)
T ss_pred             cCC
Confidence            883


No 17 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-73  Score=501.55  Aligned_cols=431  Identities=27%  Similarity=0.438  Sum_probs=362.0

Q ss_pred             CCCCCCCCC-cccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCc--ccccCch
Q 011873           31 NLPPGRKGW-PFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHK--LFKPWLP  107 (475)
Q Consensus        31 ~~ppgp~~~-p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~--~~~~~~~  107 (475)
                      ..||.-++| ||+|++..|+     .++..|++++++|||+ ||.+.++|+.+.++.+|+....+++++..  .+.....
T Consensus        31 ~~PPli~gwiP~lG~a~~fg-----k~P~eFl~~~~~K~Gd-VFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~  104 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFG-----KDPLEFLRECRKKYGD-VFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYS  104 (486)
T ss_pred             CCCcccccCcchhhHHHHhc-----cCHHHHHHHHHHhcCC-eEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHH
Confidence            567777765 9999999998     9999999999999999 99999999999999999999999988733  3333333


Q ss_pred             hhhhhhcCCCCCCC--CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh-cCCCcEEehhhHHHHHHHHHHHH
Q 011873          108 RIIENSFKSSPNIT--LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW-DGNDVVKVHDLSRKFIFALCSEL  184 (475)
Q Consensus       108 ~~~~~~~g~~~~~~--~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~vd~~~~~~~~~~~~~~~~  184 (475)
                      ....+.+|. |+..  ++....++.+.+...+...+++++++.|.+++.+.+...| +.+..-.+.+.++.+.+.+.-.+
T Consensus       105 ~l~~~vFg~-~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~l  183 (486)
T KOG0684|consen  105 KLTTPVFGK-GVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLL  183 (486)
T ss_pred             HhhhhhcCC-CccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHh
Confidence            456678887 5554  7888889999999999999999999999999999998634 34445556777778888888777


Q ss_pred             hhcCCCCchhHHHHHHHHHHHhhh----hhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHH
Q 011873          185 MYNIHDTRTADELENLAHCIMTEF----FIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLL  260 (475)
Q Consensus       185 ~fG~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~l  260 (475)
                      ++|..-.....+....+.++...+    ..+|.++|....++..++++++.+.+.+++.++++..+    ....|+++.+
T Consensus       184 l~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s----~~~~dmlq~l  259 (486)
T KOG0684|consen  184 LGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASIS----KWDNDMLQSL  259 (486)
T ss_pred             hhhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc----cccHHHHHHH
Confidence            788754433334444444444433    34566888877888889999999999999999887432    3456899999


Q ss_pred             HhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccH
Q 011873          261 LLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYT  340 (475)
Q Consensus       261 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l  340 (475)
                      ++ ..+++...+++|++..++.+++||..||+.|.+|++++|++|||+++.+++|++++++.  ....++.+.+++||.|
T Consensus       260 ~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~--~~~~l~~d~L~~lplL  336 (486)
T KOG0684|consen  260 ME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE--KKEKLTYDQLKDLPLL  336 (486)
T ss_pred             HH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc--cCCCCCHHHHhcchHH
Confidence            88 44667779999999999999999999999999999999999999999999999999952  2345999999999999


Q ss_pred             HHHHHhhhcCCCCCCccccccccccccCc----eEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCC------C-
Q 011873          341 WNVISEVLRMEPPNSGTFREALTEVTIDG----YTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI------V-  409 (475)
Q Consensus       341 ~a~i~E~lRl~p~~~~~~r~~~~d~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~------~-  409 (475)
                      ++||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.++++.+|+||++|+||++|+|+||++++.      . 
T Consensus       337 ~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~k  416 (486)
T KOG0684|consen  337 DSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEK  416 (486)
T ss_pred             HHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccccccccc
Confidence            99999999999999999999999999955    999999999999999999999999999999999997641      1 


Q ss_pred             -CCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecC-Cccccc-CccCCCCCCcceEeeeCC
Q 011873          410 -PFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP-DEKMIR-NPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       410 -~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~-~~~~~~-~~~~~p~~~~~v~~~~r~  475 (475)
                       ...|+|||+|+|.|||+.||.+|+|.++..+|++||+++.++ -+...+ .+++.|.++++|+.++|+
T Consensus       417 l~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  417 LDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             ccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence             234699999999999999999999999999999999999984 233333 338889999999999985


No 18 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-73  Score=553.83  Aligned_cols=437  Identities=19%  Similarity=0.286  Sum_probs=338.5

Q ss_pred             hhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcc
Q 011873           22 IIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKL  101 (475)
Q Consensus        22 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~  101 (475)
                      +.++.+.....+|||+++|++||+..+.     .+++.++.+++++||+ +|++++++.++++++||+++++++.++...
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~v~i~~p~~~~~il~~~~~~   93 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLG-----NLPHRDLTKMSKKYGG-IFRIWFADLYTVVLSDPILIREMFVDNFDN   93 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhc-----ccHHHHHHHHHHHhCC-eeEEEecCCCEEEECCHHHHHHHHHhcchh
Confidence            3344455677889999999999998876     5788999999999999 999999999999999999999999876444


Q ss_pred             cccCc--hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHH
Q 011873          102 FKPWL--PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRK  175 (475)
Q Consensus       102 ~~~~~--~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~  175 (475)
                      |..+.  .......+|. ++++ +|+.|+++|+++++.|+..+++++.+.+.+.+.++++.+.   ..++.+|+.+++..
T Consensus        94 ~~~r~~~~~~~~~~~~~-~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  172 (482)
T PTZ00404         94 FSDRPKIPSIKHGTFYH-GIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTK  172 (482)
T ss_pred             hcCCCCcceeeeeccCC-ceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHH
Confidence            43221  1111122343 6777 9999999999999999999999999999999998887532   24667999999999


Q ss_pred             HHHHHHHHHhhcCCCCch-------hHHHHHHHHHHHhhhhh------cCcCCCC-ccc-chhhhhhhHHHHHHHHHHHH
Q 011873          176 FIFALCSELMYNIHDTRT-------ADELENLAHCIMTEFFI------IPVNIPG-TKF-GRAVRAGREFHQRFRNMIKQ  240 (475)
Q Consensus       176 ~~~~~~~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~p~-~~~-~~~~~~~~~~~~~~~~~i~~  240 (475)
                      +++++++.++||.+.+..       ..++.+.+..+...+..      ++...|. ..+ ....+..+.+.+++.+.+++
T Consensus       173 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  252 (482)
T PTZ00404        173 FTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHE  252 (482)
T ss_pred             HHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864321       12333333332221110      0100111 001 11223445555666665555


Q ss_pred             HHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 011873          241 RRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIA  320 (475)
Q Consensus       241 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~  320 (475)
                      ++++..   .....|+++.+++...+. ...+.+++.+++..+++||+|||+++++|++++|++||++|+||++|++++.
T Consensus       253 ~~~~~~---~~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~  328 (482)
T PTZ00404        253 HLKTID---PEVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTV  328 (482)
T ss_pred             HHHccC---CCCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHh
Confidence            443211   123568999999764221 1223345889999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-ccccccccccc-CceEeCCCCEEEEeccccccCCCCCCCCCCC
Q 011873          321 NSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTI-DGYTIPKGFKLHWAVNATHKDPECFPNPEKF  398 (475)
Q Consensus       321 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  398 (475)
                      +.   +..++++++++||||+||++|+||||||++. ++|.+.+|+++ +||.||||+.|.++.+++|+||++||||++|
T Consensus       329 ~~---~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F  405 (482)
T PTZ00404        329 NG---RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQF  405 (482)
T ss_pred             cC---CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCcccc
Confidence            52   3467999999999999999999999999995 68999999999 9999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc---cccCccCCCCCCcceEeeeC
Q 011873          399 DPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK---MIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       399 ~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~---~~~~~~~~p~~~~~v~~~~r  474 (475)
                      +||||++. ..+..|+|||+|+|.|||+++|++|+++++|.|+++|+|++.++...   .....++. ++++.|++++|
T Consensus       406 ~PeRwl~~-~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        406 DPSRFLNP-DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CccccCCC-CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            99999975 35678999999999999999999999999999999999998654321   12234455 45799999987


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=9.9e-73  Score=551.73  Aligned_cols=445  Identities=17%  Similarity=0.297  Sum_probs=350.4

Q ss_pred             hhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcc
Q 011873           22 IIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKL  101 (475)
Q Consensus        22 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~  101 (475)
                      ..++..++.+.||||+++|++||+..+.     .+++.++.+++++||+ +|++++++.++++++||+++++++.++...
T Consensus        23 ~~~~~~~~~~~ppgp~~~pl~G~~~~~~-----~~~~~~~~~~~~kyG~-v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~   96 (514)
T PLN03112         23 LNASMRKSLRLPPGPPRWPIVGNLLQLG-----PLPHRDLASLCKKYGP-LVYLRLGSVDAITTDDPELIREILLRQDDV   96 (514)
T ss_pred             ccccccCCCCCccCCCCCCeeeeHHhcC-----CchHHHHHHHHHHhCC-eEEEEecCccEEEECCHHHHHHHHHhCCcc
Confidence            3344456778999999999999998875     5678899999999999 999999999999999999999999876655


Q ss_pred             cccCchhh--hhhhcCCC-CCCC-CchHHHHHHHHh-hccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhH
Q 011873          102 FKPWLPRI--IENSFKSS-PNIT-LQDEFNSLRRVI-GSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLS  173 (475)
Q Consensus       102 ~~~~~~~~--~~~~~g~~-~~~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~  173 (475)
                      |.+.....  ....+|.+ +++. +|+.|+.+|+.+ .+.|+.++++.+.+.+.+++.++++..+   ..++++|+.+.+
T Consensus        97 f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~  176 (514)
T PLN03112         97 FASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVL  176 (514)
T ss_pred             cccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHH
Confidence            65432211  12234432 3344 899999999996 5689999999999999999988887644   346789999999


Q ss_pred             HHHHHHHHHHHhhcCCCCc-------hhHHHHHHHHHHHhhh------hhcCc--CC-CCcccchhhhhhhHHHHHHHHH
Q 011873          174 RKFIFALCSELMYNIHDTR-------TADELENLAHCIMTEF------FIIPV--NI-PGTKFGRAVRAGREFHQRFRNM  237 (475)
Q Consensus       174 ~~~~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~------~~~~~--~~-p~~~~~~~~~~~~~~~~~~~~~  237 (475)
                      +.+++++++.++||.+...       ...++...+..+....      ..+|.  ++ +....++..++.+.+.+++.+.
T Consensus       177 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
T PLN03112        177 GAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKI  256 (514)
T ss_pred             HHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999986421       1223333333322111      01121  11 1111234456677788888888


Q ss_pred             HHHHHHHHhhcc-CCCcccHHHHHHhhhccCC-CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHH
Q 011873          238 IKQRRLEIEEKR-EPEHKDILSLLLLEKNKDG-EDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLRE  315 (475)
Q Consensus       238 i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~~~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E  315 (475)
                      ++++++..+... .....|+++.++++..+++ ..++++++.+++..+++||+|||+++++|++++|+.||++|+|+++|
T Consensus       257 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~E  336 (514)
T PLN03112        257 IDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEE  336 (514)
T ss_pred             HHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHH
Confidence            888776543211 1234689999998654333 24899999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCCCC
Q 011873          316 QMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPN  394 (475)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~d  394 (475)
                      ++++.+   .++.++++++++||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|+|
T Consensus       337 i~~~~~---~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~d  413 (514)
T PLN03112        337 LDSVVG---RNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDD  413 (514)
T ss_pred             HHHhcC---CCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCC
Confidence            999975   34568999999999999999999999999995 68999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC--------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc--ccc----cCcc
Q 011873          395 PEKFDPSRYQGND--------IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE--KMI----RNPN  460 (475)
Q Consensus       395 p~~F~P~R~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~--~~~----~~~~  460 (475)
                      |++|+||||..++        ..+..|+|||+|+|+|||+++|++|+++++|.|+++|+|++.++..  ...    +...
T Consensus       414 P~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  493 (514)
T PLN03112        414 VEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMT  493 (514)
T ss_pred             hhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcc
Confidence            9999999986531        1235799999999999999999999999999999999999864321  111    2334


Q ss_pred             CCCCCCcceEeeeCC
Q 011873          461 LMPEKGLPVRLYPNN  475 (475)
Q Consensus       461 ~~p~~~~~v~~~~r~  475 (475)
                      +.+.+++.++++||.
T Consensus       494 ~~~~~~~~~~~~~r~  508 (514)
T PLN03112        494 MPKAKPLRAVATPRL  508 (514)
T ss_pred             cccCCCeEEEeecCC
Confidence            556779999999984


No 20 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.5e-72  Score=546.89  Aligned_cols=444  Identities=19%  Similarity=0.258  Sum_probs=334.7

Q ss_pred             hhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcc
Q 011873           22 IIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKL  101 (475)
Q Consensus        22 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~  101 (475)
                      ..+...++.+.||||+++|++|++..+..    ...+..+.+++++||+ +|++++++.++++++||+.+++++.++...
T Consensus        21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~----~~~~~~~~~~~~~yG~-v~~i~~g~~~~v~v~dpe~i~~il~~~~~~   95 (503)
T PLN02394         21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGD----DLNHRNLAEMAKKYGD-VFLLRMGQRNLVVVSSPELAKEVLHTQGVE   95 (503)
T ss_pred             HHHHhcCcCCCCcCCCCCCeeeeHHhcCC----CchhHHHHHHHHHhCC-eEEEEcCCeeEEEeCCHHHHHHHHHhCCcc
Confidence            34445567789999999999999987752    3357889999999999 999999889999999999999999876555


Q ss_pred             cccCch-hhhhhhcCC--CCCCC-CchHHHHHHHHhh-ccCChhHHHHHHHHHHHHHHHHHHhhhc----CCCcEEehhh
Q 011873          102 FKPWLP-RIIENSFKS--SPNIT-LQDEFNSLRRVIG-SFTEPNALRRYVGMMDANAKRHLRKYWD----GNDVVKVHDL  172 (475)
Q Consensus       102 ~~~~~~-~~~~~~~g~--~~~~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~----~~~~vd~~~~  172 (475)
                      +.++.. .....+.|.  ++++. +|+.|+++|+.+. +.|+..+++.+.+.+.+++.++++.+..    .++.+++.++
T Consensus        96 ~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~  175 (503)
T PLN02394         96 FGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRR  175 (503)
T ss_pred             ccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHH
Confidence            543322 122223332  24555 8999999999996 8899889999999999999888875322    2346899999


Q ss_pred             HHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhh------------hhcCcCCCC-cccch-hhhhhhHHHH-HHHHH
Q 011873          173 SRKFIFALCSELMYNIHDTRTADELENLAHCIMTEF------------FIIPVNIPG-TKFGR-AVRAGREFHQ-RFRNM  237 (475)
Q Consensus       173 ~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~p~-~~~~~-~~~~~~~~~~-~~~~~  237 (475)
                      +..+++++++.++||.+.+...+.....+.......            ..+|...+. ..+.+ .......... +...+
T Consensus       176 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (503)
T PLN02394        176 LQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYF  255 (503)
T ss_pred             HHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999865432111111111111100            001111110 00111 1111111122 23345


Q ss_pred             HHHHHHHHhhc--cCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHH
Q 011873          238 IKQRRLEIEEK--REPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLRE  315 (475)
Q Consensus       238 i~~~~~~~~~~--~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E  315 (475)
                      ++++++..+..  +.....|+++.+++...+  +.++++++..++..+++||+|||+++++|++++|++||++|+||++|
T Consensus       256 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~E  333 (503)
T PLN02394        256 VDERKKLMSAKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDE  333 (503)
T ss_pred             HHHHHHHhhhccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            56555433211  112346899999976532  34899999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcc-ccccccccccCceEeCCCCEEEEeccccccCCCCCCC
Q 011873          316 QMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGT-FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPN  394 (475)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~d  394 (475)
                      ++++.+   .++.++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++||||++|+|
T Consensus       334 i~~v~~---~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~  410 (503)
T PLN02394        334 LDTVLG---PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKN  410 (503)
T ss_pred             HHHHhC---CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCC
Confidence            999985   245688999999999999999999999999965 6999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc--cc--ccC-ccCCC
Q 011873          395 PEKFDPSRYQGND------IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE--KM--IRN-PNLMP  463 (475)
Q Consensus       395 p~~F~P~R~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~--~~--~~~-~~~~p  463 (475)
                      |++|+||||++++      .....|+|||+|+|+|+|+++|.+|+++++|.|+++|++++.++.+  ..  .++ ..+..
T Consensus       411 P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  490 (503)
T PLN02394        411 PEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHI  490 (503)
T ss_pred             ccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeecc
Confidence            9999999999743      1245799999999999999999999999999999999999865532  11  232 34535


Q ss_pred             CCCcceEeeeCC
Q 011873          464 EKGLPVRLYPNN  475 (475)
Q Consensus       464 ~~~~~v~~~~r~  475 (475)
                      +.++.|+++||+
T Consensus       491 ~~~~~~~~~~r~  502 (503)
T PLN02394        491 AKHSTVVFKPRS  502 (503)
T ss_pred             CCCceEEeecCC
Confidence            558999999995


No 21 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2e-72  Score=546.96  Aligned_cols=419  Identities=20%  Similarity=0.360  Sum_probs=327.5

Q ss_pred             cCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCccccc
Q 011873           25 PKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP  104 (475)
Q Consensus        25 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~  104 (475)
                      ...+..++||||+++|++||++.+..    .+++.++.+|+++||+ +|++++++.++++++||+++++++.++...|..
T Consensus        23 ~~~~~~~~ppgp~~~p~~G~l~~l~~----~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~   97 (502)
T PLN02966         23 PKTKRYKLPPGPSPLPVIGNLLQLQK----LNPQRFFAGWAKKYGP-ILSYRIGSRTMVVISSAELAKELLKTQDVNFAD   97 (502)
T ss_pred             cccCCCCCCcCCCCCCeeccHHhcCC----CChhHHHHHHHHHhCC-eEEEecCCCcEEEECCHHHHHHHHHhCcccccC
Confidence            33345678999999999999998753    5688999999999999 999999999999999999999999876654543


Q ss_pred             Cchhhhhhh--cCCCCC-CC-CchHHHHHHHH-hhccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHHH
Q 011873          105 WLPRIIENS--FKSSPN-IT-LQDEFNSLRRV-IGSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRKF  176 (475)
Q Consensus       105 ~~~~~~~~~--~g~~~~-~~-~~~~~~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~~  176 (475)
                      .........  .|...+ +. +|+.|+.+|+. +++.|+..+++.+.+.+.+.+.++++.+.   ..++++|+.+++..+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  177 (502)
T PLN02966         98 RPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTF  177 (502)
T ss_pred             CCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHH
Confidence            322111111  232223 33 78999999999 78899999999999999999999888632   345689999999999


Q ss_pred             HHHHHHHHhhcCCCCchhHH---HHHHHHHHHhhh------hhcCc--CCC-Ccccch-hhhhhhHHHHHHHHHHHHHHH
Q 011873          177 IFALCSELMYNIHDTRTADE---LENLAHCIMTEF------FIIPV--NIP-GTKFGR-AVRAGREFHQRFRNMIKQRRL  243 (475)
Q Consensus       177 ~~~~~~~~~fG~~~~~~~~~---~~~~~~~~~~~~------~~~~~--~~p-~~~~~~-~~~~~~~~~~~~~~~i~~~~~  243 (475)
                      ++++++.++||.+.+....+   +.+.+.......      ..+|.  .++ ...+.+ ...+.+...+++.+.++++.+
T Consensus       178 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (502)
T PLN02966        178 TNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLD  257 (502)
T ss_pred             HHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999975432222   222222211111      01121  011 011111 123345566667777766543


Q ss_pred             HHhhccCCCcccHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc
Q 011873          244 EIEEKREPEHKDILSLLLLEKNKD--GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIAN  321 (475)
Q Consensus       244 ~~~~~~~~~~~d~~~~ll~~~~~~--~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~  321 (475)
                      ....  .....++++.+++..+++  +..++.+++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++.
T Consensus       258 ~~~~--~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  335 (502)
T PLN02966        258 PKRV--KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMK  335 (502)
T ss_pred             cccc--ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence            2111  123468999988765432  235899999999999999999999999999999999999999999999999985


Q ss_pred             cCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCC-CCCCCCC
Q 011873          322 SKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECF-PNPEKFD  399 (475)
Q Consensus       322 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~  399 (475)
                      .. .++.++++++++||||+|||+|+|||+||++. ++|.+.+|++++||.|||||.|.++++++||||++| |||++|+
T Consensus       336 ~~-~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~  414 (502)
T PLN02966        336 EK-GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFR  414 (502)
T ss_pred             cc-CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCC
Confidence            32 23467999999999999999999999999996 589999999999999999999999999999999999 9999999


Q ss_pred             CCCCCCCC----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecC
Q 011873          400 PSRYQGND----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP  451 (475)
Q Consensus       400 P~R~~~~~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~  451 (475)
                      ||||++++    ..+..|+|||+|+|+|+|++||.+|+++++|.|+++|+|++.++
T Consensus       415 PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~  470 (502)
T PLN02966        415 PERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG  470 (502)
T ss_pred             hhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC
Confidence            99999753    23568999999999999999999999999999999999998754


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=4.3e-72  Score=547.00  Aligned_cols=435  Identities=17%  Similarity=0.258  Sum_probs=332.9

Q ss_pred             CCCCCCCcccchhhhhhhccccCChhHHHHHHHHhh---cCcceeeccCCCcEEEecCcccchhhhccCCcccccCc--h
Q 011873           33 PPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKY---SSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL--P  107 (475)
Q Consensus        33 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~y---G~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~--~  107 (475)
                      +|||+++|++||++.+..     + +..+.+|.++|   |+ +|++++++.++++++||+++++++.++...+....  .
T Consensus        32 ~pgp~~~p~~G~~~~~~~-----~-~~~~~~~~~~~~~~~~-~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  104 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-----N-YDRMHDWLVEYLSKDR-TVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH  104 (516)
T ss_pred             cCCCCCCCeecchHHHHh-----c-cchHHHHHHHHhccCC-cEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence            789999999999877652     2 22345666666   77 99999999999999999999999986533343321  1


Q ss_pred             hhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHH-HHHHHHHH---hhhcCCCcEEehhhHHHHHHHHHH
Q 011873          108 RIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMD-ANAKRHLR---KYWDGNDVVKVHDLSRKFIFALCS  182 (475)
Q Consensus       108 ~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~-~~~~~~l~---~~~~~~~~vd~~~~~~~~~~~~~~  182 (475)
                      .....++|. ++++ +|+.|+++|+++++.|+..+++.+.+.+. +.+..+.+   +....++++|+.++++.+++++++
T Consensus       105 ~~~~~~~g~-~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        105 SYMEVLLGD-GIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHHHHhcC-eeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            122334565 6777 99999999999999999999999988763 33433332   222356789999999999999999


Q ss_pred             HHhhcCCCCch-----hHHHHHHHHHHHhhh--hhc-Cc-----CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 011873          183 ELMYNIHDTRT-----ADELENLAHCIMTEF--FII-PV-----NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR  249 (475)
Q Consensus       183 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~--~~~-~~-----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  249 (475)
                      .++||.+.+..     ...+...+.......  ..+ |.     +++....++..++.+.+.+++.+++++++++..++.
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        184 KVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             HHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999865321     123333333221111  001 11     111111122345667788888888888876543211


Q ss_pred             ---CCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccC---
Q 011873          250 ---EPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSK---  323 (475)
Q Consensus       250 ---~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~---  323 (475)
                         .....|+++.+++..++++..++++++.+++.++++||+|||+++++|++++|+.||++|+||++|++++....   
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence               12356899999975443344589999999999999999999999999999999999999999999999986421   


Q ss_pred             --------------CCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc-CceEeCCCCEEEEeccccccC
Q 011873          324 --------------GPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYTIPKGFKLHWAVNATHKD  388 (475)
Q Consensus       324 --------------~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d  388 (475)
                                    +.++.++++++++||||+|||+|+||++||++...|.+.+|+++ +|+.||||+.|.++.+++|||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                          11346899999999999999999999999999888888887776 999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCCCCCC----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccccCccCC
Q 011873          389 PECF-PNPEKFDPSRYQGND----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIRNPNLM  462 (475)
Q Consensus       389 ~~~~-~dp~~F~P~R~~~~~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~  462 (475)
                      |++| +||++|+||||++++    ..+..|+|||+|+|+|+|++||++|+++++|.|+++|++++.++.. ......+..
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  503 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMTILS  503 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeeeEEe
Confidence            9999 999999999999642    2345799999999999999999999999999999999999864322 222234677


Q ss_pred             CCCCcceEeeeCC
Q 011873          463 PEKGLPVRLYPNN  475 (475)
Q Consensus       463 p~~~~~v~~~~r~  475 (475)
                      |.+++.|++++|.
T Consensus       504 ~~~~~~v~~~~r~  516 (516)
T PLN03195        504 MANGLKVTVSRRS  516 (516)
T ss_pred             cCCCEEEEEEeCC
Confidence            9999999999985


No 23 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.4e-72  Score=505.83  Aligned_cols=436  Identities=23%  Similarity=0.377  Sum_probs=361.6

Q ss_pred             CCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeec-cCCCcEEEecCcccchhhhccCCcc-ccc-Cc
Q 011873           30 QNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTS-YLGADMVFLCSAEGNKLLFSNEHKL-FKP-WL  106 (475)
Q Consensus        30 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~-~~~~~~vvv~~p~~~~~i~~~~~~~-~~~-~~  106 (475)
                      ....|||+.+|++|.+..+. .....+.++.....+++||+ ||+.. +|+...|++.||+.++.++++++.. +.+ ..
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~-~~~~~~lh~~~~~~~~~YG~-I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~  126 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWR-AGGATKLHQHIVQLHQKYGP-IFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLI  126 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHH-hhhhhHHHHHHHHHHHHcCc-eeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccccc
Confidence            34458999999999888532 22236789999999999999 99999 6778899999999999999988743 221 11


Q ss_pred             h--hhhhhhcCC-CCCCC-CchHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHhhh---c---CCCcEEehhhHHH
Q 011873          107 P--RIIENSFKS-SPNIT-LQDEFNSLRRVIGS-FTEPNALRRYVGMMDANAKRHLRKYW---D---GNDVVKVHDLSRK  175 (475)
Q Consensus       107 ~--~~~~~~~g~-~~~~~-~~~~~~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~~---~---~~~~vd~~~~~~~  175 (475)
                      .  ....+.++. .|++. +|++|.+.|..+++ .+++++++.|.+.+++.+.+++....   +   ...+.|+.+.+.+
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            1  122344443 48888 99999999999987 56789999999999999988776422   2   3457799999999


Q ss_pred             HHHHHHHHHhhcCCCC-------chhHHHHHHHHHHHhh----hh--hcCcCCCCcccchhhhhhhHHHHHHHHHHHHHH
Q 011873          176 FIFALCSELMYNIHDT-------RTADELENLAHCIMTE----FF--IIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRR  242 (475)
Q Consensus       176 ~~~~~~~~~~fG~~~~-------~~~~~~~~~~~~~~~~----~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  242 (475)
                      ++++.++.++||...+       +....+.+....+...    +.  .+..+++...|++..++.+.+.++..+.|++..
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l  286 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNAL  286 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998543       2334444443333222    11  222356777899999999999999999999999


Q ss_pred             HHHhhccCC--CcccHH-HHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011873          243 LEIEEKREP--EHKDIL-SLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEI  319 (475)
Q Consensus       243 ~~~~~~~~~--~~~d~~-~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~  319 (475)
                      ++.+.....  +....+ ..|....      ++.+++..+++.+++||.|||+.|+.|+||+|++||++|++|++|+.++
T Consensus       287 ~~l~~~~~~~~~~~~~l~~~L~~~~------l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~  360 (519)
T KOG0159|consen  287 EELEKQDSAGSEYTGSLLELLLRKE------LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAV  360 (519)
T ss_pred             HHHHhccccccchhHHHHHHHHHcc------CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhh
Confidence            888765432  223333 4444322      8999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCC
Q 011873          320 ANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFD  399 (475)
Q Consensus       320 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~  399 (475)
                      .+.  .+..++.+++++||||.||||||+||||.+++..|...+|.+|+||.|||||.|.++.+.+.+||++|++|++|+
T Consensus       361 ~p~--~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~  438 (519)
T KOG0159|consen  361 LPS--GNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFL  438 (519)
T ss_pred             CCC--cccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccC
Confidence            863  356789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecC-CcccccCccCCCCCCcceEeeeCC
Q 011873          400 PSRYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP-DEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       400 P~R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ||||++++   .++..++|||.|+|+|+||.+|++|+-+.+|+|+++|+++..++ +.+..+..++.|..++.++|++|+
T Consensus       439 PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  439 PERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             hhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcceeeeeCC
Confidence            99999876   67889999999999999999999999999999999999999874 556677889999999999999986


No 24 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.7e-71  Score=537.33  Aligned_cols=430  Identities=17%  Similarity=0.235  Sum_probs=328.6

Q ss_pred             CCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCccee---eccCCCcEEEecCcccchhhhccCCcccccCc-h
Q 011873           32 LPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFK---TSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL-P  107 (475)
Q Consensus        32 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~---i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-~  107 (475)
                      ..|||+++|++||+..+...  .....+++.+..++||. .++   +++++.++++|+||+.+++|+.++...+.+.. .
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~  108 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQ--IPRIYDWTVEVLEASNL-TFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEF  108 (500)
T ss_pred             CCCCCCCCCcccchHHHHHc--cCcHHHHHHHHHHhCCC-cEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHH
Confidence            36688899999999877632  12355556666666886 665   56788999999999999999987654454432 2


Q ss_pred             hhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHH--HHHHHHHHHHHH---HhhhcCCCcEEehhhHHHHHHHHH
Q 011873          108 RIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRY--VGMMDANAKRHL---RKYWDGNDVVKVHDLSRKFIFALC  181 (475)
Q Consensus       108 ~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~--~~~~~~~~~~~l---~~~~~~~~~vd~~~~~~~~~~~~~  181 (475)
                      ......+|. |+++ +|+.|+++|+++++.|+..++..+  .+.+.+.+..++   ++....++++|+.+.+.+++++++
T Consensus       109 ~~~~~~~g~-gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        109 KKIFDVLGE-GILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             HHHHHhhcC-cccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            233455665 8888 999999999999999998877642  244444444443   322235678999999999999999


Q ss_pred             HHHhhcCCCCch-----hHHHHHHHHHHHhhh---hhcC-------cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHh
Q 011873          182 SELMYNIHDTRT-----ADELENLAHCIMTEF---FIIP-------VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIE  246 (475)
Q Consensus       182 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~-------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  246 (475)
                      +.++||.+....     ..++...+......+   ...|       .+++....++..++.+.+.+++.++|++++++..
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  267 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEI  267 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999854321     123333322221111   0111       1222222345567788899999999998876432


Q ss_pred             hc--cCCCcccHHHHHHhhhccC---CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc
Q 011873          247 EK--REPEHKDILSLLLLEKNKD---GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIAN  321 (475)
Q Consensus       247 ~~--~~~~~~d~~~~ll~~~~~~---~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~  321 (475)
                      ..  ......|+++.+++....+   +..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++++  
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v--  345 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK--  345 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh--
Confidence            11  1112468999998753221   1247889999999999999999999999999999999999999999999876  


Q ss_pred             cCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc-CceEeCCCCEEEEeccccccCCCCC-CCCCCCC
Q 011873          322 SKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYTIPKGFKLHWAVNATHKDPECF-PNPEKFD  399 (475)
Q Consensus       322 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~  399 (475)
                             ++++++.+||||+||++||||||||++...|.+.+|.++ +|+.||||+.|.++.+++||||++| +||++|+
T Consensus       346 -------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~  418 (500)
T PLN02169        346 -------FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFK  418 (500)
T ss_pred             -------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcC
Confidence                   357899999999999999999999999888888887665 9999999999999999999999999 8999999


Q ss_pred             CCCCCCCC---C--CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccccCccCCCCCCcceEeee
Q 011873          400 PSRYQGND---I--VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       400 P~R~~~~~---~--~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~v~~~~  473 (475)
                      ||||++++   .  .+..|+|||+|+|+|+|++||++|+++++|+|+++|+|++.++.. ......+++|++++.|++++
T Consensus       419 PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~~  498 (500)
T PLN02169        419 PERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVTK  498 (500)
T ss_pred             ccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEEe
Confidence            99999753   1  257899999999999999999999999999999999999875422 22334577899999999998


Q ss_pred             C
Q 011873          474 N  474 (475)
Q Consensus       474 r  474 (475)
                      |
T Consensus       499 ~  499 (500)
T PLN02169        499 K  499 (500)
T ss_pred             C
Confidence            7


No 25 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.6e-70  Score=532.35  Aligned_cols=437  Identities=20%  Similarity=0.315  Sum_probs=327.5

Q ss_pred             CCCCCCCCCCcccchhhhhhhccccCCh-hHHHHHHHHhh-cCcceeeccCCCcEEEecCcccchhhhccCCcccccCch
Q 011873           30 QNLPPGRKGWPFIGETLEYHALSKKGCI-EKFMSQRMQKY-SSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP  107 (475)
Q Consensus        30 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~-~~~~~~~~~~y-G~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  107 (475)
                      .++||||+++|++||++.+..    +.+ ..++.++.++| |+ +|++++++.++|+|+||+.+++++.++...|.++..
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~----~~~~~~~~~~~~~~~~g~-i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~  113 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIM----TRPRSKYFHLAMKELKTD-IACFNFAGTHTITINSDEIAREAFRERDADLADRPQ  113 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhcc----CCCcchhHHHHHHHhCCC-eEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCC
Confidence            348999999999999998752    222 23565666766 67 999999999999999999999999877666665543


Q ss_pred             hhhhhhcCCC--CCCC--CchHHHHHHHHhhccCChhHHHHH-HHHHHHHHHHHHHh---hhcCCCcEEehhhHHHHHHH
Q 011873          108 RIIENSFKSS--PNIT--LQDEFNSLRRVIGSFTEPNALRRY-VGMMDANAKRHLRK---YWDGNDVVKVHDLSRKFIFA  179 (475)
Q Consensus       108 ~~~~~~~g~~--~~~~--~~~~~~~~R~~~~~~f~~~~l~~~-~~~~~~~~~~~l~~---~~~~~~~vd~~~~~~~~~~~  179 (475)
                      ......++.+  ++++  +|+.|+++|+++++.|......++ .+....++.++++.   .+..+.++|+.+.+..++++
T Consensus       114 ~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        114 LSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYA  193 (534)
T ss_pred             chhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHH
Confidence            3332334432  3554  599999999999998755554444 44444445555543   23345679999999999999


Q ss_pred             HHHHHhhcCCCCc---------h-hHHHHHHHHHHHhhhhhcCc---------CCCCc----ccchhhhhhhHHHHHHHH
Q 011873          180 LCSELMYNIHDTR---------T-ADELENLAHCIMTEFFIIPV---------NIPGT----KFGRAVRAGREFHQRFRN  236 (475)
Q Consensus       180 ~~~~~~fG~~~~~---------~-~~~~~~~~~~~~~~~~~~~~---------~~p~~----~~~~~~~~~~~~~~~~~~  236 (475)
                      +++.++||.+...         . ...+...+..+...+..++.         ++...    ...+.....+.+.+++.+
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  273 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNP  273 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Confidence            9999999986421         0 01111111211111111111         11100    011222344567788888


Q ss_pred             HHHHHHHHHhhccC-CCcccHHHHHHhhhccCCC-CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHH
Q 011873          237 MIKQRRLEIEEKRE-PEHKDILSLLLLEKNKDGE-DLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLR  314 (475)
Q Consensus       237 ~i~~~~~~~~~~~~-~~~~d~~~~ll~~~~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~  314 (475)
                      +++++++...+... ....|+++.+++..++++. .+++++++.++.++++||+|||+++++|++++|+.||++|+|+++
T Consensus       274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        274 IIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            88887764432211 2246899999976544333 489999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcc-ccccccccccCceEeCCCCEEEEeccccccCCCCCC
Q 011873          315 EQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGT-FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFP  393 (475)
Q Consensus       315 E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~  393 (475)
                      |++++++   .++.++.+++.+||||+||++|+||++|+++.. .|.+.+|++++||.||||+.|.++.+++|+||++|+
T Consensus       354 Ei~~v~~---~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~  430 (534)
T PLN03018        354 ELDEVVG---KDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWK  430 (534)
T ss_pred             HHHHHhC---CCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCC
Confidence            9999975   245789999999999999999999999999966 699999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCC---------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccc---cCccC
Q 011873          394 NPEKFDPSRYQGNDI---------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMI---RNPNL  461 (475)
Q Consensus       394 dp~~F~P~R~~~~~~---------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~~~  461 (475)
                      ||++|+||||++++.         .+..|+|||+|+|.|||+++|.+|+++++|+|+++|+|++.++.....   .....
T Consensus       431 ~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  510 (534)
T PLN03018        431 DPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASL  510 (534)
T ss_pred             CccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccce
Confidence            999999999996431         346799999999999999999999999999999999999865431211   11233


Q ss_pred             CCCCCcceEeeeC
Q 011873          462 MPEKGLPVRLYPN  474 (475)
Q Consensus       462 ~p~~~~~v~~~~r  474 (475)
                      ..++++.|++++|
T Consensus       511 ~~p~~~~v~~~~R  523 (534)
T PLN03018        511 LMAKPLLLSVEPR  523 (534)
T ss_pred             ecCCCeEEEEEec
Confidence            3456899999998


No 26 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.7e-71  Score=541.47  Aligned_cols=430  Identities=27%  Similarity=0.500  Sum_probs=349.8

Q ss_pred             CCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh-hhh
Q 011873           33 PPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR-IIE  111 (475)
Q Consensus        33 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~-~~~  111 (475)
                      ||||+++|++||++.+..   .++++.++.+++++||+ +|++++++.++++|+||+.+++++.++...++..... .+.
T Consensus         1 Ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~-i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~   76 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---KGNPHEFFRELHKKYGP-IFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE   76 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---THHHHHHHHHHHHHHTS-EEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---CCcHHHHHHHHHHHhCC-EEEEeEecccccccccchhhccccccccccccccccccccc
Confidence            899999999999999984   26788999999999999 9999999999999999999999999887666654222 222


Q ss_pred             ---hhcCCCCCCC-CchHHHHHHHHhhccCChh-HHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHHHHHHHHHH
Q 011873          112 ---NSFKSSPNIT-LQDEFNSLRRVIGSFTEPN-ALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRKFIFALCSE  183 (475)
Q Consensus       112 ---~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~-~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~~~~~~~~~  183 (475)
                         ...+..+++. +++.|+.+|+.+.+.|+.. .+ ++.+.+.+.+.++++.+.   ..++.+|+.++++.+++++++.
T Consensus        77 ~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   77 IFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccc
Confidence               1233447777 8899999999999999987 55 888888888887777532   2333699999999999999999


Q ss_pred             HhhcCCCC---ch-hHHHHHHHHHHHhhh--------hhcC--cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 011873          184 LMYNIHDT---RT-ADELENLAHCIMTEF--------FIIP--VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR  249 (475)
Q Consensus       184 ~~fG~~~~---~~-~~~~~~~~~~~~~~~--------~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  249 (475)
                      ++||.+.+   .. ..++.+.+..+...+        ..+|  .++|....++..++.+.+.+++.+++++++++...+ 
T Consensus       156 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  234 (463)
T PF00067_consen  156 VLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDG-  234 (463)
T ss_dssp             HHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-
T ss_pred             ccccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            99998643   11 223333333332111        1122  234444445556677888899999999988876654 


Q ss_pred             CCCcccHHHHHHhhh-ccCC-CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCC
Q 011873          250 EPEHKDILSLLLLEK-NKDG-EDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDE  327 (475)
Q Consensus       250 ~~~~~d~~~~ll~~~-~~~~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~  327 (475)
                      .....|+++.++... +.++ ..++.+++..++..+++||+|||+.+++|++++|++||++|+||++|++++.+   .++
T Consensus       235 ~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~  311 (463)
T PF00067_consen  235 DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG---DGR  311 (463)
T ss_dssp             SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT---TSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence            235789999999886 3333 36999999999999999999999999999999999999999999999999974   234


Q ss_pred             CCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 011873          328 LLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGN  406 (475)
Q Consensus       328 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  406 (475)
                      .++.+++++||||+|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+++
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999999999 788999999999999999999999999999999999999999999999998


Q ss_pred             C----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-cccc--CccCCCCCCcceEe
Q 011873          407 D----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIR--NPNLMPEKGLPVRL  471 (475)
Q Consensus       407 ~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~--~~~~~p~~~~~v~~  471 (475)
                      +    ..+..|+|||.|+|.|||+++|++|+++++|.|+++||+++.++.. ....  ..+..|+.++.|.|
T Consensus       392 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  392 RGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            4    4578899999999999999999999999999999999999975433 2222  24677777788765


No 27 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.8e-70  Score=525.30  Aligned_cols=428  Identities=22%  Similarity=0.299  Sum_probs=331.7

Q ss_pred             CCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc-hhhhh
Q 011873           33 PPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL-PRIIE  111 (475)
Q Consensus        33 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-~~~~~  111 (475)
                      ||||+++|++||++.+..    .+++.++.+|+++||+ +|++++++.++++|+||+.+++++.++...|..+. .....
T Consensus         1 ppgp~~lP~iG~l~~~~~----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~   75 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE----KKPHRTFTKWSEIYGP-IYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALT   75 (466)
T ss_pred             CcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCC-eEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHH
Confidence            789999999999988863    5588999999999999 99999999999999999999999987766665443 22333


Q ss_pred             hhcCCCC-CCC--CchHHHHHHHHhh-ccCChhHHHHHHHHHHHHHHHHHHh---hhc--CCCcEEehhhHHHHHHHHHH
Q 011873          112 NSFKSSP-NIT--LQDEFNSLRRVIG-SFTEPNALRRYVGMMDANAKRHLRK---YWD--GNDVVKVHDLSRKFIFALCS  182 (475)
Q Consensus       112 ~~~g~~~-~~~--~~~~~~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~---~~~--~~~~vd~~~~~~~~~~~~~~  182 (475)
                      .+.|..+ ++.  +|+.|+++|+.+. +.|+...++.+.+.+.+.+...++.   .+.  .++++|+.+.++.+++++++
T Consensus        76 ~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         76 VLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence            3444333 444  4899999998664 5677667777777666655544432   222  35789999999999999999


Q ss_pred             HHhhcCCCCchh-----------HHHHHHHHHHHhhhh------hcC--cCCCCcccchhh-hhhhHHHHHHHHHHHHHH
Q 011873          183 ELMYNIHDTRTA-----------DELENLAHCIMTEFF------IIP--VNIPGTKFGRAV-RAGREFHQRFRNMIKQRR  242 (475)
Q Consensus       183 ~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--~~~p~~~~~~~~-~~~~~~~~~~~~~i~~~~  242 (475)
                      .++||.+.+...           ..+...+..+.....      .+|  .++|...+.+.. +....+.+++..++++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998643211           111111222211110      112  122321122211 223344567778887776


Q ss_pred             HHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcc
Q 011873          243 LEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANS  322 (475)
Q Consensus       243 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~  322 (475)
                      ++...+  ....|+++.+++..    ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.
T Consensus       236 ~~~~~~--~~~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~  309 (466)
T PLN02655        236 KRIARG--EERDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD  309 (466)
T ss_pred             HhhcCC--CCcccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence            654333  23468999999754    248999999999999999999999999999999999999999999999999752


Q ss_pred             CCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcc-ccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 011873          323 KGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGT-FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPS  401 (475)
Q Consensus       323 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~  401 (475)
                          ..++++++++||||+||++|+||++||++.. +|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||
T Consensus       310 ----~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~Pe  385 (466)
T PLN02655        310 ----ERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPE  385 (466)
T ss_pred             ----CCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcc
Confidence                3389999999999999999999999999865 69999999999999999999999999999999999999999999


Q ss_pred             CCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc--ccccCccCCCCCCcceEeeeCC
Q 011873          402 RYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE--KMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       402 R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ||++++   .....++|||+|+|.|||+++|..|+++++++|+++|+|++.++..  ......+..|++++.|++++|.
T Consensus       386 R~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        386 RFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             ccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecC
Confidence            999764   2346899999999999999999999999999999999999875532  1222445678899999999884


No 28 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.1e-69  Score=531.88  Aligned_cols=411  Identities=19%  Similarity=0.329  Sum_probs=324.4

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh-hhhhhcCCCCCCC-CchHHHHHHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR-IIENSFKSSPNIT-LQDEFNSLRRV  132 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~-~~~~~~g~~~~~~-~~~~~~~~R~~  132 (475)
                      +.++..+.+++++||+ ||++++++.++++|+||+.+++++..+...+...... ......|. ++++ +|+.|+.+|+.
T Consensus       151 g~~~~~l~~lh~kYGp-I~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~-~l~~~dge~wr~rRr~  228 (633)
T PLN02738        151 EAFFIPLYELFLTYGG-IFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGK-GLIPADGEIWRVRRRA  228 (633)
T ss_pred             chHHHHHHHHHHHhCC-EEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCC-ceecCCcHHHHHHHHh
Confidence            6688999999999999 9999998888999999999999998765555543222 22223443 6777 99999999999


Q ss_pred             hhccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHHHHHHHHHHHhhcCCCCch--hHHH----HHHHHH
Q 011873          133 IGSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRKFIFALCSELMYNIHDTRT--ADEL----ENLAHC  203 (475)
Q Consensus       133 ~~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~----~~~~~~  203 (475)
                      +++.|+..+++.+.+.+.+.+.++++++.   ..++++|+.+.+..+++++++.++||.+.+..  .+.+    ...+..
T Consensus       229 l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~  308 (633)
T PLN02738        229 IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLRE  308 (633)
T ss_pred             ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            99999999999999999999988877532   35678999999999999999999999865421  1122    222222


Q ss_pred             HHhh-hhhcC-cCCCC----c-ccchhhhhhhHHHHHHHHHHHHHHHHHhhc--------cCCCcccHHHHHHhhhccCC
Q 011873          204 IMTE-FFIIP-VNIPG----T-KFGRAVRAGREFHQRFRNMIKQRRLEIEEK--------REPEHKDILSLLLLEKNKDG  268 (475)
Q Consensus       204 ~~~~-~~~~~-~~~p~----~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~d~~~~ll~~~~~~~  268 (475)
                      .... ...++ +.+|.    . ..++..++.+.+.+.+.++++.+++..++.        ......|+++.+++..    
T Consensus       309 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~----  384 (633)
T PLN02738        309 AEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG----  384 (633)
T ss_pred             HHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC----
Confidence            1111 11111 11111    0 112333445556666666666544322111        0123457999998643    


Q ss_pred             CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhh
Q 011873          269 EDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVL  348 (475)
Q Consensus       269 ~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  348 (475)
                      ..++++++.+++..+++||+|||+++++|++++|++||++|+|||+|++++++    +..++++++++||||+|||+|+|
T Consensus       385 ~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~----~~~~t~edL~kLPYL~AVIkEtL  460 (633)
T PLN02738        385 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG----DRFPTIEDMKKLKYTTRVINESL  460 (633)
T ss_pred             CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC----CCCCCHHHHccCHHHHHHHHHHH
Confidence            24899999999999999999999999999999999999999999999999975    35689999999999999999999


Q ss_pred             cCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC------CCCCcccccCCCCCC
Q 011873          349 RMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND------IVPFSYVPFGAGPHI  422 (475)
Q Consensus       349 Rl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~------~~~~~~~~Fg~G~r~  422 (475)
                      ||||+++.++|++.+|++++||.|||||.|.++.+.+||||++||||++|+||||+..+      .....|+|||.|+|.
T Consensus       461 RL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~  540 (633)
T PLN02738        461 RLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRK  540 (633)
T ss_pred             hcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCC
Confidence            99999998889999999999999999999999999999999999999999999998431      234679999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhcceEEEecCCccc--ccCccCCCCCCcceEeeeCC
Q 011873          423 CPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKM--IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       423 C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |+|++||++|+++++|+|+++|+|++.++....  ....++.|++++.|++++|.
T Consensus       541 CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        541 CVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECC
Confidence            999999999999999999999999997653322  23457778999999999984


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3e-68  Score=515.04  Aligned_cols=434  Identities=17%  Similarity=0.276  Sum_probs=340.1

Q ss_pred             CCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-hhh
Q 011873           32 LPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-RII  110 (475)
Q Consensus        32 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~~~  110 (475)
                      +=.|-.+||++|..+.+......+.++..+.+|+++||+ +|++++++.++++++||+++++++.+.+..|..... ...
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGP-VYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCC-EEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            456888999999998887766667789999999999999 999999999999999999999999876445543322 222


Q ss_pred             hhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHH-HHHHHHHHHHHhh---hcCCCcEEehhhHHHHHHHHHHHHh
Q 011873          111 ENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVG-MMDANAKRHLRKY---WDGNDVVKVHDLSRKFIFALCSELM  185 (475)
Q Consensus       111 ~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~-~~~~~~~~~l~~~---~~~~~~vd~~~~~~~~~~~~~~~~~  185 (475)
                      ...+|. +++. +|+.|+++|+++++.|+..+++.+.+ .+.+.+.++++..   ..+++++|+.++++.+++++++.++
T Consensus        92 ~~~~~~-~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         92 EFLFGS-GFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             HHHhcC-ccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            234554 6777 99999999999999999888888755 5666666666542   2346789999999999999999999


Q ss_pred             hcCCCCchh--HHHHHHHHHHHhh-----hhhcCcC-CC-----CcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc---
Q 011873          186 YNIHDTRTA--DELENLAHCIMTE-----FFIIPVN-IP-----GTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR---  249 (475)
Q Consensus       186 fG~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~-~p-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---  249 (475)
                      ||.+.+...  .++...+......     ...+|.+ .+     ....++..++.+.+.+++.+.++++++..++..   
T Consensus       171 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~  250 (489)
T PLN02936        171 FNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVI  250 (489)
T ss_pred             cCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            999754211  1222222111111     1111211 00     111234556677888888888887775443211   


Q ss_pred             ------CCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccC
Q 011873          250 ------EPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSK  323 (475)
Q Consensus       250 ------~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~  323 (475)
                            .....++++.++...+    .++.+++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++  
T Consensus       251 ~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~--  324 (489)
T PLN02936        251 EGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ--  324 (489)
T ss_pred             ccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc--
Confidence                  0124678998886432    3899999999999999999999999999999999999999999999999975  


Q ss_pred             CCCCCCChhhhccCccHHHHHHhhhcCCCCCCccc-cccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCC
Q 011873          324 GPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTF-REALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSR  402 (475)
Q Consensus       324 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R  402 (475)
                        +..++++++++||||+|||+||||++||++... |.+.+|+.++||.||||+.|.++.+++|+||++|+||++|+|||
T Consensus       325 --~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR  402 (489)
T PLN02936        325 --GRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPER  402 (489)
T ss_pred             --CCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccc
Confidence              235789999999999999999999999988554 55566777799999999999999999999999999999999999


Q ss_pred             CCCCC------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc-cccCccCCCCCCcceEeeeCC
Q 011873          403 YQGND------IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK-MIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       403 ~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |++.+      ..+..|+|||+|+|.|||+++|++|+++++++|+++|++++.++.+. .....+..|.+++.|++++|+
T Consensus       403 wl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        403 FDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             cCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEEEEEeee
Confidence            99642      12457999999999999999999999999999999999998754332 222356778899999999984


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-66  Score=502.71  Aligned_cols=417  Identities=18%  Similarity=0.240  Sum_probs=324.8

Q ss_pred             CcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccc-cCch-hhhhhhcCC
Q 011873           39 WPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFK-PWLP-RIIENSFKS  116 (475)
Q Consensus        39 ~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~-~~~~-~~~~~~~g~  116 (475)
                      .++.|+.....     .+..+++..+.++++..++++..++.  ++++||+.+++++..+...|. +... ......+|.
T Consensus        49 ~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~  121 (502)
T PLN02426         49 AYLTASWAKDF-----DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGR  121 (502)
T ss_pred             CCccHHHHHhc-----ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCC
Confidence            55778876654     55677777788888744888876664  899999999999987644443 2222 234456676


Q ss_pred             CCCCC-CchHHHHHHHHhhccCChhHHHHHH--HHHHHHHHHHHHhh---h--cCCCcEEehhhHHHHHHHHHHHHhhcC
Q 011873          117 SPNIT-LQDEFNSLRRVIGSFTEPNALRRYV--GMMDANAKRHLRKY---W--DGNDVVKVHDLSRKFIFALCSELMYNI  188 (475)
Q Consensus       117 ~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~--~~~~~~~~~~l~~~---~--~~~~~vd~~~~~~~~~~~~~~~~~fG~  188 (475)
                       |+++ +|+.|+++||.+++.|+..+++.+.  +.+.+...++++..   .  ..+.++|+.++++.+++++++.++||.
T Consensus       122 -gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  200 (502)
T PLN02426        122 -GIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGL  200 (502)
T ss_pred             -ceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCC
Confidence             8888 9999999999999999998888864  44444444444321   1  123679999999999999999999998


Q ss_pred             CCCch-----hHHHHHHHHHHHh----h-hhhcC------cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCC
Q 011873          189 HDTRT-----ADELENLAHCIMT----E-FFIIP------VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPE  252 (475)
Q Consensus       189 ~~~~~-----~~~~~~~~~~~~~----~-~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (475)
                      +.+..     ..++.+.+.....    . +..+|      .+++....++..++.+.+.+++.++|+++++..   . ..
T Consensus       201 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~---~-~~  276 (502)
T PLN02426        201 DPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG---F-SA  276 (502)
T ss_pred             CCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc---c-CC
Confidence            65321     1234333332211    0 01111      122222234556677888889999998876531   1 23


Q ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChh
Q 011873          253 HKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFD  332 (475)
Q Consensus       253 ~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~  332 (475)
                      ..|+++.+++..      .+++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.  ....++++
T Consensus       277 ~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~--~~~~~t~~  348 (502)
T PLN02426        277 SKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP--NQEAASFE  348 (502)
T ss_pred             cchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC--CCCCCCHH
Confidence            569999999643      3688999999999999999999999999999999999999999999998752  23468999


Q ss_pred             hhccCccHHHHHHhhhcCCCCCCcccccccccccc-CceEeCCCCEEEEeccccccCCCCC-CCCCCCCCCCCCCCC---
Q 011873          333 DLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYTIPKGFKLHWAVNATHKDPECF-PNPEKFDPSRYQGND---  407 (475)
Q Consensus       333 ~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~---  407 (475)
                      ++++||||+|||+|+||++||++...|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+||||++++   
T Consensus       349 ~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~  428 (502)
T PLN02426        349 EMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFV  428 (502)
T ss_pred             HHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcC
Confidence            99999999999999999999999888999999888 9999999999999999999999999 999999999999753   


Q ss_pred             -CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc---ccccCccCCCCCCcceEeeeCC
Q 011873          408 -IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       408 -~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                       ..+..++|||+|+|.|+|+++|.+|+++++|.|+++|++++.+++.   ......++.|++++.|++++|.
T Consensus       429 ~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        429 PENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence             2345799999999999999999999999999999999999864322   2223457889999999999884


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.4e-63  Score=471.00  Aligned_cols=405  Identities=17%  Similarity=0.277  Sum_probs=304.6

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcE-------EEecCcccchhhhcc---
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADM-------VFLCSAEGNKLLFSN---   97 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~-------vvv~~p~~~~~i~~~---   97 (475)
                      .+.+.|||+.+||++|+.+++.+.....++..|+.+.++|||+.||+++++|.+.       ++++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4667799999999999999877533346778999999999996699999998655       999999999999985   


Q ss_pred             -CCcccccCchhhhhhhcCCC---CCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh----cCCCcEE
Q 011873           98 -EHKLFKPWLPRIIENSFKSS---PNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW----DGNDVVK  168 (475)
Q Consensus        98 -~~~~~~~~~~~~~~~~~g~~---~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~----~~~~~vd  168 (475)
                       ++..+...++.... ++|.+   +++. +|+.|+++|+++.+.|+ ..++.+.+.+.+.+.+.+++ |    ..+.++|
T Consensus        94 ~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~-w~~~~~~~~~vd  170 (480)
T PLN02648         94 DKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDT-WEAELAKKGKAE  170 (480)
T ss_pred             cccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHH-HHHHHhhCCCcc
Confidence             44445555565555 88875   6666 99999999999999999 57888999999999999986 6    2345799


Q ss_pred             ehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhh---cCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHH
Q 011873          169 VHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFI---IPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEI  245 (475)
Q Consensus       169 ~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  245 (475)
                      +.+.++.++++++++++||.+.+.  .++.+.+..+...+..   +|..            ...+...+++++.++....
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~------------~~~l~~~~~~~i~~~~~~~  236 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLA------------STGLPHVLEELLLHTFPLP  236 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHH------------HcCchHHHHHHhhcccCCc
Confidence            999999999999999999986554  2232222222221111   1110            0000011111111100000


Q ss_pred             hhccCCCcc-------cHHHHHHhhhccCCCCCCHHHHHHHHHH-HHHhcccChHHHHHHHHHHHhhCHH-HHHHHHHHH
Q 011873          246 EEKREPEHK-------DILSLLLLEKNKDGEDLTESEIALKMQA-VLIGAYDNPSIAISTIIKFLAELPE-IYEQVLREQ  316 (475)
Q Consensus       246 ~~~~~~~~~-------d~~~~ll~~~~~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p~-~~~kl~~E~  316 (475)
                      .........       +.+..+++...++  .++++++.++++. +.+++++|++++++|++++|++||+ +|+||++|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei  314 (480)
T PLN02648        237 FFLVKSDYDKLYDFFRASATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEV  314 (480)
T ss_pred             hhhhhccHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            000000001       1122344333222  3999999998875 4466777888899999999999995 999999999


Q ss_pred             HHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccC----ceEeCCCCEEEEeccccccCCCCC
Q 011873          317 MEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTID----GYTIPKGFKLHWAVNATHKDPECF  392 (475)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~----g~~ip~G~~v~~~~~~~~~d~~~~  392 (475)
                      +++.+.  .+..++++++++||||+||++|+||++||++...|++.+|++++    ||.||||+.|+++.+.+||||++|
T Consensus       315 ~~~~~~--~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~  392 (480)
T PLN02648        315 RSAVKA--GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVF  392 (480)
T ss_pred             HHHhcc--CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccC
Confidence            999752  23568999999999999999999999999998889999999995    799999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCC-CCCCccccc---------CCCCCCCccHHHHHHHHHHHHHHHHhcce-EEEecCCc
Q 011873          393 PNPEKFDPSRYQGND-IVPFSYVPF---------GAGPHICPGKEFARLKLLVFFHNLVRKFR-WEKIIPDE  453 (475)
Q Consensus       393 ~dp~~F~P~R~~~~~-~~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~~~~~  453 (475)
                      +||++|+|+||++++ .....+++|         |+|+|.|||++||++|++++++.|+++|+ |++.++..
T Consensus       393 ~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        393 DRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             CCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence            999999999998753 222345555         56779999999999999999999999998 99865543


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1e-58  Score=435.66  Aligned_cols=379  Identities=25%  Similarity=0.413  Sum_probs=314.0

Q ss_pred             hHHHHHHHHhhcCcceeeccCCCc--EEEecCcccchhhhccCCcccccCc----hh-hhhhhcCCCCCCC-CchHHHHH
Q 011873           58 EKFMSQRMQKYSSKIFKTSYLGAD--MVFLCSAEGNKLLFSNEHKLFKPWL----PR-IIENSFKSSPNIT-LQDEFNSL  129 (475)
Q Consensus        58 ~~~~~~~~~~yG~~vf~i~~~~~~--~vvv~~p~~~~~i~~~~~~~~~~~~----~~-~~~~~~g~~~~~~-~~~~~~~~  129 (475)
                      ......+.+.||. .+.+...+..  .+++++++.++++++++. .++...    .. .....+|..+++. +|+.|.++
T Consensus        25 ~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          25 RFFLERAEDPYGD-YFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhHHHHhCCCch-hhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            3445567788888 8888776665  899999999999998875 222221    11 1346677755777 99999999


Q ss_pred             HHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhh
Q 011873          130 RRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFF  209 (475)
Q Consensus       130 R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~  209 (475)
                      |++++++|+++.++++.+.+.+.+.+.++.. ..+...++.+.+..+++++++ .+||.+.++...........+.. . 
T Consensus       103 Rkl~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~-  178 (411)
T COG2124         103 RKLLAPAFTPRALRGYRPLIREIADRLLDDL-WQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-L-  178 (411)
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHhc-ccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-c-
Confidence            9999999999999999999999999999975 444566788999999999999 88999876543332222222221 1 


Q ss_pred             hcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhccc
Q 011873          210 IIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYD  289 (475)
Q Consensus       210 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~  289 (475)
                       .+...+...+.+..++...+.+++.++|++++.       ...+|+++.++....+++..+|++|+.++++++++||+|
T Consensus       179 -~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGhe  250 (411)
T COG2124         179 -DPDLGPEEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHE  250 (411)
T ss_pred             -CcccCCcccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhH
Confidence             133333444677788999999999999999983       567899999998876655579999999999999999999


Q ss_pred             ChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCc
Q 011873          290 NPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDG  369 (475)
Q Consensus       290 tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g  369 (475)
                      ||+++|+|+++.|++||+.++++++|.+.                   ||++++++|+||++||++...|.+.+|++++|
T Consensus       251 TTa~~l~~a~~~L~~~P~~~~~l~~e~~~-------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg  311 (411)
T COG2124         251 TTANALAWALYALLRHPDQLAKLRAEPDR-------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGG  311 (411)
T ss_pred             HHHHHHHHHHHHHHHCchHHHHHHhCcch-------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCC
Confidence            99999999999999999999999988663                   79999999999999999998899999999999


Q ss_pred             eEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEe
Q 011873          370 YTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKI  449 (475)
Q Consensus       370 ~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~  449 (475)
                      +.||||+.|.++++++||||++|++|++|+|+||.      ..|+|||+|+|.|+|..||++|++++++.++++|++...
T Consensus       312 ~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~  385 (411)
T COG2124         312 YRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLL  385 (411)
T ss_pred             EEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhc
Confidence            99999999999999999999999999999999988      679999999999999999999999999999999998876


Q ss_pred             cCCcccccCccCCCCCCcceEeeeCC
Q 011873          450 IPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       450 ~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      .++.......+..|.....+.++.|+
T Consensus       386 ~~~~~~~~~~~~~~~g~~~l~v~~~~  411 (411)
T COG2124         386 AEPPPLVRRPTLVPRGGERLPVRRRR  411 (411)
T ss_pred             CCCCCccccccccCCCcceeeeecCC
Confidence            54222345667778877888877663


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=76.08  E-value=0.85  Score=38.00  Aligned_cols=43  Identities=23%  Similarity=0.212  Sum_probs=32.1

Q ss_pred             CccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEE
Q 011873          337 MKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHW  380 (475)
Q Consensus       337 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~  380 (475)
                      -..+.|||.|+.-+.. ...+--+..+|+.++|..||||+.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~-Gs~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVD-GSRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeC-CCEEEEEEcCceEECCEEeCCCCEEEE
Confidence            4566789999887654 233333578899999999999998765


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=59.81  E-value=9.7  Score=24.27  Aligned_cols=19  Identities=26%  Similarity=0.604  Sum_probs=16.1

Q ss_pred             HHHHHHhhCHHHHHHHHHH
Q 011873          297 TIIKFLAELPEIYEQVLRE  315 (475)
Q Consensus       297 ~~l~~L~~~p~~~~kl~~E  315 (475)
                      -++.+|.+||++.++|.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            4678999999999999763


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=54.15  E-value=45  Score=20.49  Aligned_cols=42  Identities=17%  Similarity=0.233  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHH
Q 011873          275 EIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQ  316 (475)
Q Consensus       275 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~  316 (475)
                      ++...+..++-.|.|..+-.++--+.+.--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566677777888888888888888999999888877665


No 36 
>PHA03049 IMV membrane protein; Provisional
Probab=53.14  E-value=47  Score=21.76  Aligned_cols=27  Identities=26%  Similarity=0.432  Sum_probs=14.2

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCCCCCC
Q 011873           13 LALYSLYYVIIKPKPTTQNLPPGRKGW   39 (475)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~ppgp~~~   39 (475)
                      +++-++++..++++......||.|--.
T Consensus        13 aIi~lIvYgiYnkk~~~q~~~p~~e~y   39 (68)
T PHA03049         13 VIIGLIVYGIYNKKTTTSQNPPSQEKY   39 (68)
T ss_pred             HHHHHHHHHHHhcccccCCCCCChhhc
Confidence            333444455566666666666654333


No 37 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=47.19  E-value=15  Score=27.91  Aligned_cols=6  Identities=33%  Similarity=0.545  Sum_probs=2.2

Q ss_pred             HHhhcc
Q 011873           20 YVIIKP   25 (475)
Q Consensus        20 ~~~~~~   25 (475)
                      |+++|+
T Consensus        86 y~irR~   91 (122)
T PF01102_consen   86 YCIRRL   91 (122)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            333333


No 38 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=44.37  E-value=19  Score=27.66  Aligned_cols=23  Identities=26%  Similarity=0.577  Sum_probs=16.9

Q ss_pred             CCCccHHHHHHHHHHHHHHHHhc
Q 011873          421 HICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       421 r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      -.|.|++||+..+-.++..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999873


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=43.38  E-value=27  Score=23.82  Aligned_cols=38  Identities=16%  Similarity=0.134  Sum_probs=29.2

Q ss_pred             HHhhhcCCCCCC-ccccccccccc--cCceEeCCCCEEEEe
Q 011873          344 ISEVLRMEPPNS-GTFREALTEVT--IDGYTIPKGFKLHWA  381 (475)
Q Consensus       344 i~E~lRl~p~~~-~~~r~~~~d~~--l~g~~ip~G~~v~~~  381 (475)
                      ++|.+.|.+... .+-|.+.+...  ++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            788999998544 34577777544  499999999999875


No 40 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=38.90  E-value=49  Score=19.14  Aligned_cols=22  Identities=18%  Similarity=0.386  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHh-hCHHHHHHHHH
Q 011873          293 IAISTIIKFLA-ELPEIYEQVLR  314 (475)
Q Consensus       293 ~~l~~~l~~L~-~~p~~~~kl~~  314 (475)
                      ..+...+..++ +|||+++.+++
T Consensus        13 ~qL~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   13 DQLQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHHHhChhHHHHHHh
Confidence            34566666666 89999887764


No 41 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=36.51  E-value=1.5e+02  Score=20.87  Aligned_cols=51  Identities=14%  Similarity=0.246  Sum_probs=41.9

Q ss_pred             CCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc
Q 011873          271 LTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIAN  321 (475)
Q Consensus       271 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~  321 (475)
                      ...+.........++-=++.++......+.+.+.||+..+++.+.+.+-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            445556666677888889999999999999999999999999988876553


No 42 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=35.64  E-value=30  Score=24.22  Aligned_cols=20  Identities=5%  Similarity=0.293  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHHhcceEEEec
Q 011873          431 LKLLVFFHNLVRKFRWEKII  450 (475)
Q Consensus       431 ~~~~~~la~ll~~f~~~~~~  450 (475)
                      ..|+-++..+|+-|||.|++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            46789999999999999984


No 43 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=35.61  E-value=12  Score=35.24  Aligned_cols=44  Identities=18%  Similarity=0.131  Sum_probs=32.1

Q ss_pred             CccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEe
Q 011873          337 MKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWA  381 (475)
Q Consensus       337 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~  381 (475)
                      -..+.|||.|+.-+.- ...+--+..+|+.++|..|||||.|.-.
T Consensus       255 ~n~I~A~V~~~qtv~~-G~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVD-GSAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEec-CCEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            3456688999887664 2333335788999999999999987544


No 44 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=34.64  E-value=2e+02  Score=21.94  Aligned_cols=63  Identities=11%  Similarity=0.164  Sum_probs=32.3

Q ss_pred             hHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhc--------cCCCCCCHHHHHHHHHHHHHhcccC
Q 011873          228 REFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKN--------KDGEDLTESEIALKMQAVLIGAYDN  290 (475)
Q Consensus       228 ~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~--------~~~~~~~~~~i~~~~~~~~~ag~~t  290 (475)
                      +++.+-+..++++++++-....+..-.+....|++...        ..+..++.++--..++........+
T Consensus        10 ~~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~   80 (127)
T PF05261_consen   10 NKVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFT   80 (127)
T ss_dssp             HCHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            45667778888888765433222233445566665431        1244577777666666555544333


No 45 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=33.77  E-value=70  Score=25.25  Aligned_cols=30  Identities=13%  Similarity=0.396  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 011873            6 LSLLLLSLALYSLYYVIIKPKPTTQNLPPGRK   37 (475)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~   37 (475)
                      +.+++|++++..++++++++..  ++.||-|.
T Consensus       154 IG~~VlA~~VA~L~~~F~RR~~--rrsppeps  183 (215)
T PF05084_consen  154 IGAVVLAVSVAMLTWFFLRRTG--RRSPPEPS  183 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhc--cCCCCCCC
Confidence            3445555555555555555543  33444443


No 46 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=33.69  E-value=1.4e+02  Score=19.81  Aligned_cols=19  Identities=42%  Similarity=0.497  Sum_probs=8.5

Q ss_pred             HHHHHhhccCCCCCCCCCC
Q 011873           17 SLYYVIIKPKPTTQNLPPG   35 (475)
Q Consensus        17 ~~~~~~~~~~~~~~~~ppg   35 (475)
                      ++++..+++++.....||.
T Consensus        17 lIlY~iYnr~~~~q~~~~~   35 (68)
T PF05961_consen   17 LILYGIYNRKKTTQNTNPS   35 (68)
T ss_pred             HHHHHHHhcccccCCCCCc
Confidence            3334444555444444443


No 47 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.95  E-value=1.1e+02  Score=22.67  Aligned_cols=11  Identities=18%  Similarity=0.033  Sum_probs=7.1

Q ss_pred             Ccccchhhhhh
Q 011873           39 WPFIGETLEYH   49 (475)
Q Consensus        39 ~p~~G~~~~~~   49 (475)
                      -|+.||+-...
T Consensus        46 ~p~YgNL~~~q   56 (107)
T PF15330_consen   46 DPCYGNLELQQ   56 (107)
T ss_pred             Ccccccccccc
Confidence            57788766543


No 48 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=29.74  E-value=39  Score=25.77  Aligned_cols=22  Identities=36%  Similarity=0.330  Sum_probs=18.5

Q ss_pred             cccccccccCceEeCCCCEEEE
Q 011873          359 REALTEVTIDGYTIPKGFKLHW  380 (475)
Q Consensus       359 r~~~~d~~l~g~~ip~G~~v~~  380 (475)
                      -.+.+|.+++|-.||+|+.|+.
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            4567799999999999998865


No 49 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=28.79  E-value=2.6e+02  Score=21.10  Aligned_cols=60  Identities=13%  Similarity=0.289  Sum_probs=29.7

Q ss_pred             hHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhh----c----cCCCCCCHHHHHHHHHHHHHhc
Q 011873          228 REFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEK----N----KDGEDLTESEIALKMQAVLIGA  287 (475)
Q Consensus       228 ~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~----~----~~~~~~~~~~i~~~~~~~~~ag  287 (475)
                      +...+-+..++++|+++-....+-.-.+....|++..    .    .....++..+--..++....-.
T Consensus         3 ~~v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt   70 (118)
T PRK13713          3 NEVYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKT   70 (118)
T ss_pred             hHHHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHH
Confidence            3556777888888887543322222233444444332    1    1223366555544555444443


No 50 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=28.23  E-value=99  Score=29.79  Aligned_cols=37  Identities=16%  Similarity=0.282  Sum_probs=17.1

Q ss_pred             HHhhcCcceeeccCCCcEEEecCcccchhhhccCCccc
Q 011873           65 MQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLF  102 (475)
Q Consensus        65 ~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~  102 (475)
                      .-+||. |+.=.+-++.+-|=.=|..-++-+.++...|
T Consensus       220 ~Grfg~-V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy  256 (534)
T KOG3653|consen  220 RGRFGC-VWKAQLDNRLVAVKIFPEQEKQSFQNEKNIY  256 (534)
T ss_pred             cCccce-eehhhccCceeEEEecCHHHHHHHHhHHHHH
Confidence            346777 7775554544333223333333344333333


No 51 
>PHA03162 hypothetical protein; Provisional
Probab=28.10  E-value=36  Score=25.89  Aligned_cols=24  Identities=21%  Similarity=0.315  Sum_probs=20.8

Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHH
Q 011873          417 GAGPHICPGKEFARLKLLVFFHNL  440 (475)
Q Consensus       417 g~G~r~C~G~~~a~~~~~~~la~l  440 (475)
                      ++|.+.|||+...+-++..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999999998888888776


No 52 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=27.91  E-value=1.8e+02  Score=20.17  Aligned_cols=60  Identities=15%  Similarity=0.079  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCChhhhc---cCccHHHHHHhhhcCCCCCCccc--cccccccccCce
Q 011873          307 EIYEQVLREQMEIANSKGPDELLSFDDLK---RMKYTWNVISEVLRMEPPNSGTF--REALTEVTIDGY  370 (475)
Q Consensus       307 ~~~~kl~~E~~~~~~~~~~~~~~~~~~l~---~lp~l~a~i~E~lRl~p~~~~~~--r~~~~d~~l~g~  370 (475)
                      +.|+++.+.+.++    ..+...++.++.   ..|.--..+--+++-+|....+|  |++..+=.++||
T Consensus         2 ~f~~~V~~~l~~I----P~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRTI----PYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhCC----CCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            4577777777766    457788998886   34444455666677776433444  778778777776


No 53 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=27.90  E-value=1.7e+02  Score=20.69  Aligned_cols=18  Identities=28%  Similarity=0.519  Sum_probs=15.5

Q ss_pred             CHHHHHHHHHHHHHHhcc
Q 011873          305 LPEIYEQVLREQMEIANS  322 (475)
Q Consensus       305 ~p~~~~kl~~E~~~~~~~  322 (475)
                      .|++.+.+|+||.++++.
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999999764


No 54 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.52  E-value=40  Score=28.40  Aligned_cols=23  Identities=22%  Similarity=0.423  Sum_probs=18.8

Q ss_pred             Eecccc-ccCCCCCCCCCCCCCCC
Q 011873          380 WAVNAT-HKDPECFPNPEKFDPSR  402 (475)
Q Consensus       380 ~~~~~~-~~d~~~~~dp~~F~P~R  402 (475)
                      ++-|.- |-|+.+|.|...|+|-|
T Consensus       188 iPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  188 IPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCcccccCccccCCCC
Confidence            344444 89999999999999988


No 55 
>PF01405 PsbT:  Photosystem II reaction centre T protein;  InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].   This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=26.09  E-value=1.2e+02  Score=16.30  Aligned_cols=16  Identities=25%  Similarity=0.389  Sum_probs=8.5

Q ss_pred             ChhHHHHHHHHHHHHH
Q 011873            1 MEFIILSLLLLSLALY   16 (475)
Q Consensus         1 m~~~~~~~~~~~~~~~   16 (475)
                      |+.++.+++++..+..
T Consensus         1 MEa~vY~~ll~~tlgi   16 (29)
T PF01405_consen    1 MEALVYTFLLIGTLGI   16 (29)
T ss_dssp             -HHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHH
Confidence            5666666665554333


No 56 
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=25.86  E-value=1.2e+02  Score=16.44  Aligned_cols=15  Identities=27%  Similarity=0.231  Sum_probs=8.6

Q ss_pred             ChhHHHHHHHHHHHH
Q 011873            1 MEFIILSLLLLSLAL   15 (475)
Q Consensus         1 m~~~~~~~~~~~~~~   15 (475)
                      |+.++++++++..+.
T Consensus         1 MEal~Ytfll~~tlg   15 (31)
T PRK11875          1 MESFAYILILTLALV   15 (31)
T ss_pred             ChhHHHHHHHHHHHH
Confidence            566666666554433


No 57 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=25.74  E-value=32  Score=21.55  Aligned_cols=11  Identities=36%  Similarity=0.824  Sum_probs=8.6

Q ss_pred             cccCCCCCCCc
Q 011873          414 VPFGAGPHICP  424 (475)
Q Consensus       414 ~~Fg~G~r~C~  424 (475)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999998774


No 58 
>PF15240 Pro-rich:  Proline-rich
Probab=25.31  E-value=50  Score=26.95  Aligned_cols=11  Identities=45%  Similarity=0.733  Sum_probs=5.3

Q ss_pred             ChhHHHHHHHH
Q 011873            1 MEFIILSLLLL   11 (475)
Q Consensus         1 m~~~~~~~~~~   11 (475)
                      |++|++++++|
T Consensus         1 MLlVLLSvALL   11 (179)
T PF15240_consen    1 MLLVLLSVALL   11 (179)
T ss_pred             ChhHHHHHHHH
Confidence            55554444443


No 59 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=23.09  E-value=81  Score=24.39  Aligned_cols=17  Identities=24%  Similarity=0.383  Sum_probs=6.6

Q ss_pred             HHHHHHHHHHHHhhccC
Q 011873           10 LLSLALYSLYYVIIKPK   26 (475)
Q Consensus        10 ~~~~~~~~~~~~~~~~~   26 (475)
                      +++++++.++++..+++
T Consensus        40 Vliiiiivli~lcssRK   56 (189)
T PF05568_consen   40 VLIIIIIVLIYLCSSRK   56 (189)
T ss_pred             HHHHHHHHHHHHHhhhh
Confidence            33333333444443333


No 60 
>CHL00031 psbT photosystem II protein T
Probab=22.87  E-value=1.5e+02  Score=16.43  Aligned_cols=14  Identities=36%  Similarity=0.584  Sum_probs=8.0

Q ss_pred             ChhHHHHHHHHHHH
Q 011873            1 MEFIILSLLLLSLA   14 (475)
Q Consensus         1 m~~~~~~~~~~~~~   14 (475)
                      |+.++++++++..+
T Consensus         1 MEalvYtfll~~tl   14 (33)
T CHL00031          1 MEALVYTFLLVSTL   14 (33)
T ss_pred             CchhHHHHHHHHHH
Confidence            56666666655443


No 61 
>PF07172 GRP:  Glycine rich protein family;  InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=22.40  E-value=1.2e+02  Score=22.04  Aligned_cols=11  Identities=36%  Similarity=0.187  Sum_probs=4.4

Q ss_pred             ChhHHHHHHHH
Q 011873            1 MEFIILSLLLL   11 (475)
Q Consensus         1 m~~~~~~~~~~   11 (475)
                      |+.-.+++|.+
T Consensus         1 MaSK~~llL~l   11 (95)
T PF07172_consen    1 MASKAFLLLGL   11 (95)
T ss_pred             CchhHHHHHHH
Confidence            44443333333


No 62 
>PF02663 FmdE:  FmdE, Molybdenum formylmethanofuran dehydrogenase operon ;  InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].  This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=22.30  E-value=77  Score=24.51  Aligned_cols=22  Identities=23%  Similarity=0.371  Sum_probs=17.9

Q ss_pred             CCCccHHHHHHHHHHHHHHHHh
Q 011873          421 HICPGKEFARLKLLVFFHNLVR  442 (475)
Q Consensus       421 r~C~G~~~a~~~~~~~la~ll~  442 (475)
                      |.|||--++..+.+.++..|=.
T Consensus         5 H~Cpgl~~G~r~~~~a~~~l~~   26 (131)
T PF02663_consen    5 HLCPGLALGYRMAKYALEELGI   26 (131)
T ss_dssp             S--HHHHHHHHHHHHHHHHHTS
T ss_pred             CcCccHHHHHHHHHHHHHHcCC
Confidence            8999999999999999998844


No 63 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=21.34  E-value=2.9e+02  Score=19.15  Aligned_cols=18  Identities=0%  Similarity=0.139  Sum_probs=8.2

Q ss_pred             HHHHHHHHHHHHHhhccC
Q 011873            9 LLLSLALYSLYYVIIKPK   26 (475)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~   26 (475)
                      ++.+.+++++++..+++.
T Consensus        10 ~V~V~IVclliya~YRR~   27 (92)
T PHA02681         10 VIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            333344444455554444


No 64 
>PRK05933 type III secretion system protein; Validated
Probab=21.12  E-value=96  Score=28.09  Aligned_cols=43  Identities=12%  Similarity=0.110  Sum_probs=31.8

Q ss_pred             cHHHHHHhhhcCCCCCCc-ccccc-cc--ccccCceEeCCCCEEEEe
Q 011873          339 YTWNVISEVLRMEPPNSG-TFREA-LT--EVTIDGYTIPKGFKLHWA  381 (475)
Q Consensus       339 ~l~a~i~E~lRl~p~~~~-~~r~~-~~--d~~l~g~~ip~G~~v~~~  381 (475)
                      ....-|+|.|+|.+.... +-|.+ .+  |+.++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            455569999999986543 33554 34  566699999999999875


No 65 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=20.83  E-value=77  Score=17.38  Aligned_cols=17  Identities=18%  Similarity=0.440  Sum_probs=13.8

Q ss_pred             CCCCcccccCCCCCCCc
Q 011873          408 IVPFSYVPFGAGPHICP  424 (475)
Q Consensus       408 ~~~~~~~~Fg~G~r~C~  424 (475)
                      .....|+|+.|..|.|.
T Consensus        15 p~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   15 PRDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCCcEeCCCCccccCc
Confidence            34578999998899995


Done!