Query         011873
Match_columns 475
No_of_seqs    183 out of 1813
Neff          11.2
Searched_HMMs 29240
Date          Mon Mar 25 17:03:59 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011873.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011873hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ld6_A Lanosterol 14-alpha dem 100.0 2.1E-78 7.1E-83  586.6  33.4  432   30-475    10-454 (461)
  2 2ve3_A Putative cytochrome P45 100.0 2.6E-78 8.8E-83  582.5  32.9  432   26-475     7-444 (444)
  3 3nxu_A Cytochrome P450 3A4; al 100.0 1.2E-76 4.1E-81  579.0  31.3  438   28-475    11-475 (485)
  4 3k9v_A 1,25-dihydroxyvitamin D 100.0 2.3E-75 7.7E-80  569.8  37.9  439   23-474    16-482 (482)
  5 3tbg_A Cytochrome P450 2D6; mo 100.0 3.5E-75 1.2E-79  568.0  36.1  440   25-475     4-476 (479)
  6 3s79_A Cytochrome P450 19A1; o 100.0 3.5E-74 1.2E-78  564.2  38.7  433   28-475    42-496 (503)
  7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.5E-74 8.6E-79  561.4  36.4  436   26-475     5-472 (476)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 3.7E-74 1.3E-78  559.1  35.6  434   29-475     8-473 (476)
  9 1po5_A Cytochrome P450 2B4; ox 100.0 7.2E-74 2.4E-78  557.1  35.3  434   29-475     8-473 (476)
 10 1r9o_A Cytochrome P450 2C9; mo 100.0 1.1E-73 3.7E-78  556.3  35.2  434   29-475     9-474 (477)
 11 2cib_A Cytochrome P450 51; hem 100.0 3.2E-74 1.1E-78  555.8  30.8  432   31-475     4-449 (455)
 12 3gw9_A Sterol 14alpha-demethyl 100.0 1.6E-73 5.4E-78  551.9  34.5  430   30-475     2-450 (450)
 13 3swz_A Steroid 17-alpha-hydrox 100.0 8.7E-74   3E-78  559.7  32.7  438   27-475     4-479 (494)
 14 3qz1_A Steroid 21-hydroxylase; 100.0 2.7E-74 9.4E-79  563.9  28.9  439   20-475    18-484 (496)
 15 3czh_A Cytochrome P450 2R1; vi 100.0   1E-72 3.4E-77  549.2  37.5  436   28-475     9-476 (481)
 16 3i3k_A Lanosterol 14-alpha dem 100.0 3.2E-73 1.1E-77  550.8  33.2  429   27-470     7-450 (461)
 17 3pm0_A Cypib1, cytochrome P450 100.0   8E-74 2.7E-78  562.4  29.0  438   26-475     4-484 (507)
 18 3n9y_A Cholesterol SIDE-chain  100.0 7.2E-73 2.5E-77  552.6  34.3  440   25-475     3-475 (487)
 19 2hi4_A Cytochrome P450 1A2; CY 100.0 2.2E-72 7.7E-77  549.1  32.0  434   28-474    13-487 (495)
 20 3dbg_A Putative cytochrome P45 100.0 4.6E-73 1.6E-77  550.1  25.8  423   30-471    22-458 (467)
 21 3mdm_A Cholesterol 24-hydroxyl 100.0 3.3E-70 1.1E-74  529.1  37.4  412   55-475    10-442 (456)
 22 2ij2_A Cytochrome P450 BM3; mo 100.0 1.3E-70 4.4E-75  532.5  34.4  425   31-475     3-452 (470)
 23 3v8d_A Cholesterol 7-alpha-mon 100.0 8.7E-70   3E-74  530.7  29.1  431   26-472     8-483 (491)
 24 3dax_A Cytochrome P450 7A1; ch 100.0   4E-69 1.4E-73  526.6  29.7  431   27-474     9-485 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 1.1E-66 3.8E-71  509.9  34.8  429   25-474    12-489 (498)
 26 1izo_A P450bsbeta, cytochrome  100.0 6.8E-67 2.3E-71  498.8  32.4  398   39-475     8-416 (417)
 27 3b98_A Prostaglandin I2 syntha 100.0 3.7E-67 1.3E-71  510.6  29.5  422   27-475    14-471 (475)
 28 2cd8_A Cytochrome P450 monooxy 100.0   2E-66   7E-71  496.6  29.7  391   29-475    24-429 (436)
 29 3awm_A Fatty acid alpha-hydrox 100.0 1.2E-65 4.2E-70  489.8  29.3  399   33-474     4-413 (415)
 30 1n97_A CYP175A1; electron tran 100.0 7.5E-66 2.6E-70  486.5  20.7  376   35-474     3-386 (389)
 31 1jfb_A Nitric-oxide reductase  100.0 2.4E-63 8.2E-68  472.3  32.1  386   32-470     2-403 (404)
 32 1ued_A P450 OXYC, P450 monooxy 100.0 4.6E-64 1.6E-68  476.4  27.1  381   28-471     7-406 (406)
 33 2jjn_A Cytochrome P450 113A1;  100.0 1.2E-63   4E-68  474.8  28.9  393   21-475     9-407 (411)
 34 1cpt_A Cytochrome P450-TERP; o 100.0 1.1E-63 3.7E-68  477.5  28.7  400   28-474     3-428 (428)
 35 2zwu_A Camphor 5-monooxygenase 100.0 1.2E-63 4.1E-68  473.9  28.4  396   25-475     5-411 (415)
 36 3ejb_B Biotin biosynthesis cyt 100.0 7.6E-63 2.6E-67  468.9  32.1  373   55-475    13-397 (404)
 37 3a4g_A Vitamin D hydroxylase;  100.0 2.2E-62 7.6E-67  465.0  35.0  369   55-475    20-402 (411)
 38 2zbx_A Cytochrome P450-SU1; be 100.0 3.5E-62 1.2E-66  464.5  31.7  387   30-472     4-407 (412)
 39 1q5d_A P450 epoxidase; cytochr 100.0 4.2E-62 1.5E-66  464.9  31.0  374   55-475    26-417 (419)
 40 2xkr_A CYP142, putative cytoch 100.0 8.3E-62 2.9E-66  460.3  32.2  372   55-475    18-395 (398)
 41 3aba_A Cytochrome P450; oxidor 100.0 2.4E-62 8.1E-67  464.2  28.5  371   55-475    19-403 (403)
 42 3nc3_A Cytochrome P450 CYPX; c 100.0 3.7E-63 1.3E-67  474.4  22.9  380   55-473    53-440 (441)
 43 3dsk_A Cytochrome P450 74A, ch 100.0 2.3E-63   8E-68  486.0  21.8  401   25-451    22-472 (495)
 44 4fb2_A P450CIN; heme, monooxyg 100.0 3.4E-62 1.2E-66  463.0  29.0  369   55-475    19-394 (398)
 45 2uuq_A CYP130, cytochrome P450 100.0 8.6E-63 2.9E-67  468.3  24.6  387   41-475    11-414 (414)
 46 1s1f_A Putative cytochrome P45 100.0 5.5E-62 1.9E-66  462.2  29.3  382   31-472     8-405 (406)
 47 3buj_A CALO2; heme, iron, meta 100.0 8.2E-62 2.8E-66  460.2  30.0  369   55-474    13-396 (397)
 48 2dkk_A Cytochrome P450; CYP158 100.0 7.2E-62 2.5E-66  461.1  29.2  368   55-474    27-410 (411)
 49 1odo_A Putative cytochrome P45 100.0 2.2E-61 7.4E-66  458.7  32.3  370   55-473    15-407 (408)
 50 2z3t_A Cytochrome P450; monoxy 100.0 6.1E-62 2.1E-66  464.0  27.8  374   55-474    20-416 (425)
 51 3abb_A CYP105D6, cytochrome P4 100.0 5.3E-62 1.8E-66  462.9  26.8  369   55-475    24-408 (408)
 52 3dan_A Cytochrome P450 74A2; A 100.0 2.1E-62 7.1E-67  476.9  23.5  397   28-451     6-454 (473)
 53 3mgx_A Putative P450 monooxyge 100.0 5.8E-61   2E-65  455.1  32.1  368   55-474    37-415 (415)
 54 3r9b_A Cytochrome P450 164A2;  100.0 1.6E-61 5.5E-66  461.9  28.4  376   54-475    28-418 (418)
 55 3ivy_A Cytochrome P450 CYP125; 100.0 1.1E-61 3.7E-66  463.8  26.7  391   29-475    16-429 (433)
 56 1gwi_A CYP154C1, cytochrome P4 100.0 1.9E-61 6.4E-66  459.0  27.9  371   55-475    17-410 (411)
 57 1z8o_A 6-deoxyerythronolide B  100.0 5.8E-61   2E-65  455.1  30.9  368   55-472    14-403 (404)
 58 2y5n_A MYCG, P-450-like protei 100.0 1.1E-60 3.8E-65  453.8  31.7  367   55-471    37-417 (417)
 59 3lxh_A Cytochrome P450; heme,  100.0   6E-61 2.1E-65  457.6  29.1  374   55-475    38-418 (421)
 60 2xbk_A PIMD protein; epoxidati 100.0 2.2E-60 7.7E-65  449.5  31.3  361   55-471    26-404 (404)
 61 3oft_A Cytochrome P450, CYP101 100.0 8.7E-61   3E-65  453.5  28.3  366   55-472    24-395 (396)
 62 2wm5_A CYP124, putative cytoch 100.0 1.8E-60 6.3E-65  454.9  29.7  373   55-472    44-435 (435)
 63 2z36_A MOXA, cytochrome P450 t 100.0 3.3E-60 1.1E-64  450.4  28.7  367   55-472    22-408 (413)
 64 3tkt_A Cytochrome P450; aromat 100.0   4E-60 1.4E-64  454.9  28.6  375   57-473    47-449 (450)
 65 3tyw_A Putative cytochrome P45 100.0   8E-60 2.7E-64  449.2  29.2  349   55-453    29-391 (417)
 66 3rwl_A Cytochrome P450 alkane  100.0 6.9E-59 2.4E-63  442.8  34.5  374   55-473    38-426 (426)
 67 3oo3_A OXY protein; cytochrome 100.0 4.3E-59 1.5E-63  440.0  28.6  361   55-471    12-384 (384)
 68 1lfk_A OXYB, P450 monooxygenas 100.0 6.1E-60 2.1E-64  447.2  21.7  359   61-471    19-398 (398)
 69 1n40_A P450 MT2, cytochrome P4 100.0 1.8E-59 6.2E-64  443.4  23.8  364   55-471    16-396 (396)
 70 2wiy_A XPLA-heme, cytochrome P 100.0 3.8E-58 1.3E-62  433.8  31.3  370   55-472    20-394 (394)
 71 3b4x_A 367AA long hypothetical 100.0 1.2E-58   4E-63  433.0  26.3  350   58-473     2-366 (367)
 72 1io7_A Cytochrome P450 CYP119; 100.0 1.1E-57 3.9E-62  427.1  28.8  352   58-475     2-368 (368)
 73 3p3o_A Cytochrome P450; monoox 100.0 4.3E-58 1.5E-62  436.6  25.6  370   55-473    33-415 (416)
 74 2rfb_A Cytochrome P450; heme,  100.0   2E-57   7E-62  421.1  20.0  335   66-469     2-342 (343)
 75 4dnj_A Putative cytochrome P45 100.0   3E-55   1E-59  415.9  28.0  383   36-473    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 3.4E-52 1.2E-56  393.9  27.2  373   55-472    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 3.9E-50 1.3E-54  371.0   0.9  333   32-471    35-381 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  36.9      30   0.001   16.3   2.1   13  307-319     8-20  (26)
 79 3ijw_A Aminoglycoside N3-acety  24.4      40  0.0014   28.7   2.5   30  373-402    64-107 (268)
 80 2nyg_A YOKD protein; PFAM02522  21.7      50  0.0017   28.3   2.5   24  372-395    61-84  (273)
 81 3arc_T Photosystem II reaction  20.4 1.1E+02  0.0037   16.1   3.5   15    1-15      1-15  (32)

No 1  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=2.1e-78  Score=586.64  Aligned_cols=432  Identities=22%  Similarity=0.371  Sum_probs=366.5

Q ss_pred             CCCCCCCCC-CcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC--c
Q 011873           30 QNLPPGRKG-WPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW--L  106 (475)
Q Consensus        30 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~--~  106 (475)
                      .+.||+|++ +|++||++++.     ++++.++.+++++||+ ||+++++|.++++|+||+++++++.+++..+...  .
T Consensus        10 ~~~PP~~~~~lP~iG~~~~~~-----~~~~~~~~~~~~kYG~-i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~   83 (461)
T 3ld6_A           10 VKSPPYIFSPIPFLGHAIAFG-----KSPIEFLENAYEKYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVY   83 (461)
T ss_dssp             CCCCCBCCCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHH
T ss_pred             CCCCCCCCCCcCeeeeHHHhh-----hCHHHHHHHHHHHhCC-EEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcch
Confidence            346777765 89999999987     7899999999999999 9999999999999999999999998876655433  2


Q ss_pred             hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHh
Q 011873          107 PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELM  185 (475)
Q Consensus       107 ~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~  185 (475)
                      .......+|.+.++. +|+.|+++|+++++.|+...++++.+.+.+.+.++++. +.++..+|+.+.+..+++++++.++
T Consensus        84 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~  162 (461)
T 3ld6_A           84 SRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFES-WGESGEKNVFEALSELIILTASHCL  162 (461)
T ss_dssp             HHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGG-GCSEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHHHHHHHHH
Confidence            233446677744455 99999999999999999999999999999999998885 6667789999999999999999999


Q ss_pred             hcCCCCch-hHHHHHHHHHHHhhh----hhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHH
Q 011873          186 YNIHDTRT-ADELENLAHCIMTEF----FIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLL  260 (475)
Q Consensus       186 fG~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~l  260 (475)
                      ||.+.... .+.+...+..+...+    ..++.++|...+.+..++.+.+.+++.+.+++++.+     ....+|+++.+
T Consensus       163 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-----~~~~~d~l~~l  237 (461)
T 3ld6_A          163 HGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS-----QEKIDDILQTL  237 (461)
T ss_dssp             TCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCCCSHHHHH
T ss_pred             cCcchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCcchhhhh
Confidence            99754321 233333444333322    345667777667777778888888888888876542     14467999999


Q ss_pred             HhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccH
Q 011873          261 LLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYT  340 (475)
Q Consensus       261 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l  340 (475)
                      ++...+++..++++++..++..+++||+|||+++++|++++|+.||++|+||++|++++++.  ....++.+++++||||
T Consensus       238 l~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~~~l~~lpyl  315 (461)
T 3ld6_A          238 LDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE--NLPPLTYDQLKDLNLL  315 (461)
T ss_dssp             HTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCT--TCCCCCHHHHHTCHHH
T ss_pred             HHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcc--cccchhHHHHHHHhhh
Confidence            98877777779999999999999999999999999999999999999999999999999863  3457889999999999


Q ss_pred             HHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC---CCCCcccccC
Q 011873          341 WNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND---IVPFSYVPFG  417 (475)
Q Consensus       341 ~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~---~~~~~~~~Fg  417 (475)
                      +|||+|+||++|+++...|.+++|++++||.||||+.|.++.+++|+||++|+||++|+||||++++   ..+..|+|||
T Consensus       316 ~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~pFG  395 (461)
T 3ld6_A          316 DRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFG  395 (461)
T ss_dssp             HHHHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCTTC
T ss_pred             hheeeeccccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccccCC
Confidence            9999999999999998899999999999999999999999999999999999999999999999875   3567899999


Q ss_pred             CCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccccCccCCCCCCcceEeeeCC
Q 011873          418 AGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       418 ~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +|+|.|||++||++|+++++|.|+++|+|+++++.. ......++.+++++.|+++||+
T Consensus       396 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rs  454 (461)
T 3ld6_A          396 AGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRS  454 (461)
T ss_dssp             CGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC
T ss_pred             CcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECC
Confidence            999999999999999999999999999999976533 2334445555667999999997


No 2  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=2.6e-78  Score=582.52  Aligned_cols=432  Identities=28%  Similarity=0.541  Sum_probs=361.7

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC
Q 011873           26 KPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        26 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      ..++.+.||||+++|++||++.+.     .++. ++.+++++||+ +|+++++|.+.++++||+.+++++.+++..|++.
T Consensus         7 ~~~~~~~pPgp~~~P~iG~~~~~~-----~~~~-~~~~~~~~yg~-v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~   79 (444)
T 2ve3_A            7 NLNSLPIPPGDFGLPWLGETLNFL-----NDGD-FGKKRQQQFGP-IFKTRLFGKNVIFISGALANRFLFTKEQETFQAT   79 (444)
T ss_dssp             --CCCCCCCCCCCBTTTBTHHHHH-----HCTT-HHHHHHHHHCS-SEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEE
T ss_pred             CCCCCCCCCCCCCCCccccHHHHh-----cCcH-HHHHHHHHcCC-eEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccc
Confidence            345667899999999999999886     3455 78899999999 9999988888999999999999998876556644


Q ss_pred             chhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHH
Q 011873          106 LPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSEL  184 (475)
Q Consensus       106 ~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~  184 (475)
                      ........+|..+++. +|+.|+++|+++++.|+.++++++.+.+.+.+.+++++ +..++++|+.+++..+++++++.+
T Consensus        80 ~~~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~vd~~~~~~~~~~~vi~~~  158 (444)
T 2ve3_A           80 WPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQ-WGKANEVIWYPQLRRMTFDVAATL  158 (444)
T ss_dssp             CCHHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHH-HHHSSEEEHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-hcCCCcEeHHHHHHHHHHHHHHHH
Confidence            4334445566657777 99999999999999999999999999999999999986 555678999999999999999999


Q ss_pred             hhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhh
Q 011873          185 MYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEK  264 (475)
Q Consensus       185 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~  264 (475)
                      +||....+. .++.+.+..+...+..++..+|...+.+..++.+.+.+++.+++++++++     .....|+++.+++..
T Consensus       159 ~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~~d~l~~ll~~~  232 (444)
T 2ve3_A          159 FMGEKVSQN-PQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQ-----PPSEEDALGILLAAR  232 (444)
T ss_dssp             HTCHHHHSC-TTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTS-----CCCCSSHHHHHHHCB
T ss_pred             HcCCCcccH-HHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCccCHHHHHHhcc
Confidence            999311111 34444454444444444555665445566677788888899998887653     134579999999865


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHH
Q 011873          265 NKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVI  344 (475)
Q Consensus       265 ~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  344 (475)
                      .+++..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++++    +..++++++++||||+|||
T Consensus       233 ~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~----~~~~~~~~l~~lpyl~a~i  308 (444)
T 2ve3_A          233 DDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL----SQELTAETLKKMPYLDQVL  308 (444)
T ss_dssp             CTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCC----SSCCCHHHHTTCHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcc----CCCCChhhhhcChHHHHHH
Confidence            444556999999999999999999999999999999999999999999999998864    2378999999999999999


Q ss_pred             HhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCC
Q 011873          345 SEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND----IVPFSYVPFGAGP  420 (475)
Q Consensus       345 ~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~----~~~~~~~~Fg~G~  420 (475)
                      +|+||++||++.++|.+++|++++||.||||+.|.++.+++|+||++|+||++|+||||++++    ..+..|+|||+|+
T Consensus       309 ~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~  388 (444)
T 2ve3_A          309 QEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGL  388 (444)
T ss_dssp             HHHHHHSCSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGG
T ss_pred             HHHHhcCCCccCccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCC
Confidence            999999999998889999999999999999999999999999999999999999999999753    2345699999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccccCccCCCCCCcceEeeeCC
Q 011873          421 HICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       421 r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |.|||++||.+|++++++.|+++|++++.++.. ......+..|.++++|++++|+
T Consensus       389 r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          389 RECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             GCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred             ccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence            999999999999999999999999999875432 3344567889999999999996


No 3  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.2e-76  Score=578.98  Aligned_cols=438  Identities=21%  Similarity=0.334  Sum_probs=342.1

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccC-CcccccCc
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNE-HKLFKPWL  106 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~-~~~~~~~~  106 (475)
                      .+++.||||+++|++||++.+.     .+++.++.+|+++||+ +|++++++.++++|+||+++++++.++ ...|....
T Consensus        11 ~k~~~~PGP~~~PliGn~~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~   84 (485)
T 3nxu_A           11 FKKLGIPGPTPLPFLGNILSYH-----KGFCMFDMECHKKYGK-VWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRR   84 (485)
T ss_dssp             HHHHTCCCCCCBTTTBTGGGGG-----GCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCC
T ss_pred             HhhCCCCCCCCcCeecCcHHhh-----cChHHHHHHHHHHcCC-eEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCc
Confidence            3455699999999999999986     6788999999999999 999999999999999999999999876 34454332


Q ss_pred             hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHHHHHHHHH
Q 011873          107 PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRKFIFALCS  182 (475)
Q Consensus       107 ~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~~~~~~~~  182 (475)
                      .......++. +++. +|+.|+++|+++++.|+.++++++.+.+.+.+.++++.+.   .+++++|+.+++..+++++++
T Consensus        85 ~~~~~~~~~~-~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~  163 (485)
T 3nxu_A           85 PFGPVGFMKS-AISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVIT  163 (485)
T ss_dssp             CCSCCGGGGG-STTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHH
T ss_pred             cccccccccc-CccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHH
Confidence            2222223444 6777 9999999999999999999999999999999998887532   356799999999999999999


Q ss_pred             HHhhcCCCCchh---HHHHHHHHHHHh---------hhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccC
Q 011873          183 ELMYNIHDTRTA---DELENLAHCIMT---------EFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKRE  250 (475)
Q Consensus       183 ~~~fG~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  250 (475)
                      .++||.+.+...   +.+.........         ....+|...|...........+...+.+.+.+++..+...+...
T Consensus       164 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (485)
T 3nxu_A          164 STSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQ  243 (485)
T ss_dssp             HHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             HHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhccC
Confidence            999999765321   222222211110         00112211111000000111223334444444443333222222


Q ss_pred             CCcccHHHHHHhhhccC----CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCC
Q 011873          251 PEHKDILSLLLLEKNKD----GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPD  326 (475)
Q Consensus       251 ~~~~d~~~~ll~~~~~~----~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~  326 (475)
                      ....|+++.+++....+    +..++++++..++..+++||+|||+++++|++++|+.||++|+||++|++++++   .+
T Consensus       244 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~  320 (485)
T 3nxu_A          244 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP---NK  320 (485)
T ss_dssp             --CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST---TT
T ss_pred             CCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhc---cC
Confidence            44679999999765422    335899999999999999999999999999999999999999999999999975   34


Q ss_pred             CCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 011873          327 ELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGN  406 (475)
Q Consensus       327 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  406 (475)
                      ..++++++++||||+|||+|+||++|+++.++|.+++|++++||.||||+.|.++.+++|+||++|+||++|+||||+++
T Consensus       321 ~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~  400 (485)
T 3nxu_A          321 APPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK  400 (485)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHH
T ss_pred             CCCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCC
Confidence            67899999999999999999999999999889999999999999999999999999999999999999999999999975


Q ss_pred             C---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc---ccccCccCCCCCCcceEeeeCC
Q 011873          407 D---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       407 ~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +   ..+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++..   ......++.|++++.|++++|+
T Consensus       401 ~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  475 (485)
T 3nxu_A          401 NKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRD  475 (485)
T ss_dssp             HHTTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC-
T ss_pred             ccccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEcc
Confidence            3   3567799999999999999999999999999999999999875432   2233457889899999999985


No 4  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=2.3e-75  Score=569.84  Aligned_cols=439  Identities=18%  Similarity=0.291  Sum_probs=353.8

Q ss_pred             hccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCccc
Q 011873           23 IKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLF  102 (475)
Q Consensus        23 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~  102 (475)
                      ++...++.+.+|||+++|++||++.+......++++.++.+|+++||+ +|++++++.+.++++||+++++++.+.. .|
T Consensus        16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~   93 (482)
T 3k9v_A           16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQ-IFRMKLGSFDSVHLGSPSLLEALYRTES-AH   93 (482)
T ss_dssp             ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTCC-SS
T ss_pred             cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCC-EEEEccCCCCEEEEcCHHHHHHHHHhcC-CC
Confidence            345557888999999999999999886432225688999999999999 9999998889999999999999998754 34


Q ss_pred             ccCc-hh---hhhhhc-CCCCCCC-CchHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHHHHhhh----cCCCcEEehh
Q 011873          103 KPWL-PR---IIENSF-KSSPNIT-LQDEFNSLRRVIGSFT-EPNALRRYVGMMDANAKRHLRKYW----DGNDVVKVHD  171 (475)
Q Consensus       103 ~~~~-~~---~~~~~~-g~~~~~~-~~~~~~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~l~~~~----~~~~~vd~~~  171 (475)
                      ..+. ..   ...... +..+++. +|+.|+++|+.+++.| +...++.+.+.+.+.+.++++...    ..++++|+.+
T Consensus        94 ~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~  173 (482)
T 3k9v_A           94 PQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYS  173 (482)
T ss_dssp             CCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHH
T ss_pred             CCCCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Confidence            3321 11   122222 2337777 9999999999999986 778899999999999988887532    1456899999


Q ss_pred             hHHHHHHHHHHHHhhcCCCC-------chhHHHHHHHHHHHhhhhhc---Cc----CCCCcccchhhhhhhHHHHHHHHH
Q 011873          172 LSRKFIFALCSELMYNIHDT-------RTADELENLAHCIMTEFFII---PV----NIPGTKFGRAVRAGREFHQRFRNM  237 (475)
Q Consensus       172 ~~~~~~~~~~~~~~fG~~~~-------~~~~~~~~~~~~~~~~~~~~---~~----~~p~~~~~~~~~~~~~~~~~~~~~  237 (475)
                      ++..+++++++.++||.+.+       ....++.+.+..+...+...   |.    +++...+++..+..+.+.+.+.+.
T Consensus       174 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  253 (482)
T 3k9v_A          174 ELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPC  253 (482)
T ss_dssp             HHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998652       12234444444443332211   11    112222333445566677778888


Q ss_pred             HHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 011873          238 IKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQM  317 (475)
Q Consensus       238 i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~  317 (475)
                      +++++++...   ....|++..++...     .++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++
T Consensus       254 i~~r~~~~~~---~~~~d~l~~ll~~~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  325 (482)
T 3k9v_A          254 IDNRLQRYSQ---QPGADFLCDIYQQD-----HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ  325 (482)
T ss_dssp             HHHHHHHTTT---CTTSCHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcc---CCchHHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            8887754432   23467888877642     389999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCC
Q 011873          318 EIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEK  397 (475)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~  397 (475)
                      ++++   .++.++++++++||||+|||+|+|||+|+++.++|.+.+|++++||.||||+.|.++.+++|+||++|+||++
T Consensus       326 ~v~~---~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~  402 (482)
T 3k9v_A          326 SVLP---DNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHK  402 (482)
T ss_dssp             HHSC---TTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTS
T ss_pred             HHhC---CCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCc
Confidence            9985   3457899999999999999999999999999889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC--CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCC-cccccCccCCCCCCcceEeeeC
Q 011873          398 FDPSRYQGND--IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPD-EKMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       398 F~P~R~~~~~--~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~p~~~~~v~~~~r  474 (475)
                      |+||||++++  ..+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++. .......+..|.++++|++++|
T Consensus       403 F~PeRfl~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          403 FRPERWLQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             CCGGGGTCTTSCCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             cCccccCCCCCCCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence            9999999865  356789999999999999999999999999999999999986543 2344566888999999999998


No 5  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=3.5e-75  Score=568.02  Aligned_cols=440  Identities=17%  Similarity=0.254  Sum_probs=328.8

Q ss_pred             cCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCccccc
Q 011873           25 PKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP  104 (475)
Q Consensus        25 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~  104 (475)
                      +.+++.++||||+++|++||++++..    ++.+..+.+|+++||+ ||++++++.++++|+||+++++++.+++..|+.
T Consensus         4 ~~ss~~kLPPGP~~lP~iGn~~~~~~----~~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~   78 (479)
T 3tbg_A            4 KTSSKGKLPPGPLPLPGLGNLLHVDF----QNTPYCFDQLRRRFGD-VFSLQLAWTPVVVLNGLAAVREALVTHGEDTAD   78 (479)
T ss_dssp             -----CCCCCCSCCBTTTBTGGGCCT----TSHHHHHHHHHHHHCS-EEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCB
T ss_pred             CCCCCCCCCCCCCCcCcccchHhhcC----CCHHHHHHHHHHHhCC-EEEEEECCeeEEEECCHHHHHHHHHhCChhhcC
Confidence            33445579999999999999998864    6788999999999999 999999999999999999999999887766665


Q ss_pred             CchhhhhhhcC----CCCC-CC-CchHHHHHHHHhhccCChhHHHH--HHHHHHHHHHHHHHhh-hcCCCcEEehhhHHH
Q 011873          105 WLPRIIENSFK----SSPN-IT-LQDEFNSLRRVIGSFTEPNALRR--YVGMMDANAKRHLRKY-WDGNDVVKVHDLSRK  175 (475)
Q Consensus       105 ~~~~~~~~~~g----~~~~-~~-~~~~~~~~R~~~~~~f~~~~l~~--~~~~~~~~~~~~l~~~-~~~~~~vd~~~~~~~  175 (475)
                      +........++    ..++ +. +|+.|+++|+.+.+.|+...+..  +.+.+........... ...++.+|+.+++..
T Consensus        79 r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  158 (479)
T 3tbg_A           79 RPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK  158 (479)
T ss_dssp             CCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHH
T ss_pred             CCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHH
Confidence            43322222221    1234 44 79999999999988886544432  2333333333222211 245678999999999


Q ss_pred             HHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhh-----------hhcCcCCCCc-ccchhhhhhhHHHHHHHHHHHHHHH
Q 011873          176 FIFALCSELMYNIHDTRTADELENLAHCIMTEF-----------FIIPVNIPGT-KFGRAVRAGREFHQRFRNMIKQRRL  243 (475)
Q Consensus       176 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~  243 (475)
                      +++++++.++||........+............           ...+...... ...+.....+...+.+.+.++++.+
T Consensus       159 ~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (479)
T 3tbg_A          159 AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRM  238 (479)
T ss_dssp             HHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999976543333322222211111           1111111111 1122334445555666666666554


Q ss_pred             HHhhccCCCcccHHHHHHhh----hccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011873          244 EIEEKREPEHKDILSLLLLE----KNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEI  319 (475)
Q Consensus       244 ~~~~~~~~~~~d~~~~ll~~----~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~  319 (475)
                      .....  ....|.++.+...    ..+.+..++++++..++.++++||+|||+++++|++++|++||++|+|||+|++++
T Consensus       239 ~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~  316 (479)
T 3tbg_A          239 TWDPA--QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV  316 (479)
T ss_dssp             HCCTT--SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hhhcc--cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            43322  3345555554433    22344569999999999999999999999999999999999999999999999998


Q ss_pred             hccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccc-cccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCC
Q 011873          320 ANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTF-REALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKF  398 (475)
Q Consensus       320 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  398 (475)
                      +.   .++.++.+++++||||+|||+||||++|+++... |.+.+|++++||.|||||.|.++.+++|+||++|+||++|
T Consensus       317 ~~---~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F  393 (479)
T 3tbg_A          317 IG---QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRF  393 (479)
T ss_dssp             TC---SSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred             Hh---hccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCcccc
Confidence            75   4567899999999999999999999999999655 5678899999999999999999999999999999999999


Q ss_pred             CCCCCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCccc----ccCccCCCCCCcceEe
Q 011873          399 DPSRYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKM----IRNPNLMPEKGLPVRL  471 (475)
Q Consensus       399 ~P~R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~----~~~~~~~p~~~~~v~~  471 (475)
                      +||||++++   ..+..|+|||+|+|.|||++||++|+++++|.|+++|||++.++....    ....+..|. +++|++
T Consensus       394 ~PeRfl~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~-~~~v~~  472 (479)
T 3tbg_A          394 HPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-PYELCA  472 (479)
T ss_dssp             CGGGGBCTTCCBCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEEC-CCCBEE
T ss_pred             CccccCCCCcccCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCC-CeEEEE
Confidence            999999864   456789999999999999999999999999999999999987653322    223455665 799999


Q ss_pred             eeCC
Q 011873          472 YPNN  475 (475)
Q Consensus       472 ~~r~  475 (475)
                      +|||
T Consensus       473 ~pRs  476 (479)
T 3tbg_A          473 VPRH  476 (479)
T ss_dssp             EEC-
T ss_pred             EECC
Confidence            9997


No 6  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=3.5e-74  Score=564.19  Aligned_cols=433  Identities=19%  Similarity=0.304  Sum_probs=348.8

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP  107 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  107 (475)
                      .+.+.||||+++|++||++.+..... ...+..+.+|+++||+ +|++++++.++++++||++++++++++  .+..+..
T Consensus        42 ~~~~~pPGP~~~P~iGnl~~~~~~~~-~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~  117 (503)
T 3s79_A           42 EGTSSIPGPGYCMGIGPLISHGRFLW-MGIGSACNYYNRVYGE-FMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFG  117 (503)
T ss_dssp             ---CCCCSCCCCSSSHHHHHHHHHHH-HCHHHHHHHHHHHSCS-EEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCC
T ss_pred             hccCCCCCCCCCceeeehhccccccc-cchhHHHHHHHHHhCC-eEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcch
Confidence            35678999999999999998863211 2456788899999999 999999999999999999999999654  3433322


Q ss_pred             h-hhhh---hcCCCCC-CC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHHHHH
Q 011873          108 R-IIEN---SFKSSPN-IT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRKFIF  178 (475)
Q Consensus       108 ~-~~~~---~~g~~~~-~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~~~~  178 (475)
                      . ....   ..|. ++ +. +|+.|+++|+++++.|+..+++++.+.+.+.+.+++++..   ..++++|+.+++..+++
T Consensus       118 ~~~~~~~~~~~~~-~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~  196 (503)
T 3s79_A          118 SKLGLQCIGMHEK-GIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVML  196 (503)
T ss_dssp             CHHHHHHHTCTTS-SSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHH
T ss_pred             hhhhhhhhccCCC-ceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHH
Confidence            1 1112   2233 44 44 8999999999999999999999999999999999987532   34678999999999999


Q ss_pred             HHHHHHhhcCCCCch--hHHHHHHHHHHHhhhhhcCc---CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccC-CC
Q 011873          179 ALCSELMYNIHDTRT--ADELENLAHCIMTEFFIIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKRE-PE  252 (475)
Q Consensus       179 ~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~  252 (475)
                      ++++.++||.+.++.  ...+.+.+..+..... .+.   .+++ ..++..++.+.+.+++.++++++++....+.. ..
T Consensus       197 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  274 (503)
T 3s79_A          197 DTSNTLFLRIPLDESAIVVKIQGYFDAWQALLI-KPDIFFKISW-LYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEE  274 (503)
T ss_dssp             HHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHTT-CCHHHHHSGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred             HHHHHHHcCcccCchhHHHHHHHHHHHHHHHhc-CcHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence            999999999977532  1222222222221111 110   1121 23456677788899999999998877654322 23


Q ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChh
Q 011873          253 HKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFD  332 (475)
Q Consensus       253 ~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~  332 (475)
                      ..|+++.+++..++  ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++    ++.++++
T Consensus       275 ~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~----~~~~~~~  348 (503)
T 3s79_A          275 CMDFATELILAEKR--GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG----ERDIKID  348 (503)
T ss_dssp             TCCHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT----TSCCCHH
T ss_pred             HHHHHHHHHHhccc--CCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCCCCHH
Confidence            45999999976533  34999999999999999999999999999999999999999999999999985    4679999


Q ss_pred             hhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCc
Q 011873          333 DLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFS  412 (475)
Q Consensus       333 ~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~  412 (475)
                      ++++||||+|||+|+||++|+++...|.+++|++++||.||||+.|.++.+++|+| ++|+||++|+||||++. .....
T Consensus       349 ~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~-~~~~~  426 (503)
T 3s79_A          349 DIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKN-VPYRY  426 (503)
T ss_dssp             HHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSC-CCTTT
T ss_pred             HHhcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCC-CCccc
Confidence            99999999999999999999999888999999999999999999999999999998 99999999999999975 34568


Q ss_pred             ccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc----ccccCccCCCCCC---cceEeeeCC
Q 011873          413 YVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE----KMIRNPNLMPEKG---LPVRLYPNN  475 (475)
Q Consensus       413 ~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~----~~~~~~~~~p~~~---~~v~~~~r~  475 (475)
                      |+|||+|+|.|||++||.+|++++++.|+++|+|++.++..    ......+..|..+   ++|+++||+
T Consensus       427 ~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~  496 (503)
T 3s79_A          427 FQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRN  496 (503)
T ss_dssp             CCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC
T ss_pred             ccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCC
Confidence            99999999999999999999999999999999999876432    2233556677765   999999995


No 7  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=2.5e-74  Score=561.39  Aligned_cols=436  Identities=18%  Similarity=0.284  Sum_probs=346.0

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC
Q 011873           26 KPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        26 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      ..++.++||||+++|++||++.+..    .+++.++.+|+++||+ +|++++++.++++|+||+++++++.++...|..+
T Consensus         5 ~~~~~~lpPgP~~~PliG~~~~~~~----~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r   79 (476)
T 3e6i_A            5 TSSKGKLPPGPFPLPIIGNLFQLEL----KNIPKSFTRLAQRFGP-VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGR   79 (476)
T ss_dssp             -----CCCCCCCCBTTTBTGGGCCT----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEE
T ss_pred             ccCCCCCCcCCCCcccccChhhhcc----ccHhHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcchHhhCCC
Confidence            3456789999999999999998843    7789999999999999 9999999999999999999999998876556543


Q ss_pred             c-hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHH--HHHHHHHHHHHHHHHHhhh-cCCCcEEehhhHHHHHHHH
Q 011873          106 L-PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNAL--RRYVGMMDANAKRHLRKYW-DGNDVVKVHDLSRKFIFAL  180 (475)
Q Consensus       106 ~-~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~l~~~~-~~~~~vd~~~~~~~~~~~~  180 (475)
                      . ......+.+. +++. +|+.|+++|++..+.|+...+  +.+.+.+.+.+.++++... ..++++|+.+++..+++++
T Consensus        80 ~~~~~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dv  158 (476)
T 3e6i_A           80 GDLPAFHAHRDR-GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNV  158 (476)
T ss_dssp             CCCGGGGGGTTS-SSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHH
T ss_pred             CCCchhheecCC-CEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHH
Confidence            2 2233444555 7777 999999999988877764333  3466788888888887533 2467899999999999999


Q ss_pred             HHHHhhcCCCCchhHHHHHHHHHHHhhh-----------hhcC---cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHh
Q 011873          181 CSELMYNIHDTRTADELENLAHCIMTEF-----------FIIP---VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIE  246 (475)
Q Consensus       181 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  246 (475)
                      ++.++||.+.+....++......+...+           ..+|   .++|. ..++..++.+.+.+++.+.++++++...
T Consensus       159 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (476)
T 3e6i_A          159 IADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERVKEHHQSLD  237 (476)
T ss_dssp             HHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999976543333222222211110           1112   23343 2345566777888888888888776433


Q ss_pred             hccCCCcccHHHHHHhhhccC----CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcc
Q 011873          247 EKREPEHKDILSLLLLEKNKD----GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANS  322 (475)
Q Consensus       247 ~~~~~~~~d~~~~ll~~~~~~----~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~  322 (475)
                      .   ....|+++.++....++    +..++++++..++..+++||+|||+++++|++++|++||++|+||++|++++++ 
T Consensus       238 ~---~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~-  313 (476)
T 3e6i_A          238 P---NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIG-  313 (476)
T ss_dssp             T---TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-
T ss_pred             C---CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcC-
Confidence            2   23568999888754332    235899999999999999999999999999999999999999999999999975 


Q ss_pred             CCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 011873          323 KGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPS  401 (475)
Q Consensus       323 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~  401 (475)
                        .++.++++++++||||+|||+|+||++|+++ +++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||
T Consensus       314 --~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~Pe  391 (476)
T 3e6i_A          314 --PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPE  391 (476)
T ss_dssp             --TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGG
T ss_pred             --CCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCch
Confidence              3567899999999999999999999999998 5889999999999999999999999999999999999999999999


Q ss_pred             CCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccc-----cCccCCCCCCcceEeee
Q 011873          402 RYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMI-----RNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       402 R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~-----~~~~~~p~~~~~v~~~~  473 (475)
                      ||++++   ..+..|+|||+|+|.|+|++||.+|++++++.|+++|+|++..++....     ...+..| .+++|+++|
T Consensus       392 R~l~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~  470 (476)
T 3e6i_A          392 HFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYKLCVIP  470 (476)
T ss_dssp             GGBCTTSSBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCCEEEEE
T ss_pred             hhcCCCCCccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeEEEEEe
Confidence            999764   3567899999999999999999999999999999999999854322221     1223445 479999999


Q ss_pred             CC
Q 011873          474 NN  475 (475)
Q Consensus       474 r~  475 (475)
                      |+
T Consensus       471 R~  472 (476)
T 3e6i_A          471 RS  472 (476)
T ss_dssp             CC
T ss_pred             cc
Confidence            96


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=3.7e-74  Score=559.13  Aligned_cols=434  Identities=17%  Similarity=0.296  Sum_probs=348.0

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-  107 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-  107 (475)
                      +.+.||||+++|++||+..+..    ++++.++.+++++||+ +|++++++.++++|+||+.+++++.++...|..... 
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~-v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~   82 (476)
T 2fdv_A            8 KGKLPPGPTPLPFIGNYLQLNT----EQMYNSLMKISERYGP-VFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQ   82 (476)
T ss_dssp             CCBCCCCCCCBTTTBTGGGCCT----TBHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCC
T ss_pred             cCCCCCCCCCCcccccHhhcCC----cchHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCc
Confidence            4468999999999999998742    6788999999999999 999999888899999999999999765544543221 


Q ss_pred             hhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHH--HHHHHHHHHHHHHHHHhhhc-CCCcEEehhhHHHHHHHHHHH
Q 011873          108 RIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNAL--RRYVGMMDANAKRHLRKYWD-GNDVVKVHDLSRKFIFALCSE  183 (475)
Q Consensus       108 ~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~~~~~~  183 (475)
                      .......+..+++. +|+.|+++|+++.+.|+...+  +.+.+.+.+.+.++++.+.. .++++|+.+++..+++++++.
T Consensus        83 ~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~  162 (476)
T 2fdv_A           83 ATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISS  162 (476)
T ss_dssp             HHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence            12222223347777 999999999999999987666  77899999999988886432 456899999999999999999


Q ss_pred             HhhcCCCCch---hHHHHHHHHHHHhh--------hhhcCc---CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 011873          184 LMYNIHDTRT---ADELENLAHCIMTE--------FFIIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR  249 (475)
Q Consensus       184 ~~fG~~~~~~---~~~~~~~~~~~~~~--------~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  249 (475)
                      ++||.+.+..   ..++.+.+..+...        ...+|.   ++|. ..++..++.+.+.+++.+.+++++++...  
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--  239 (476)
T 2fdv_A          163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKVEHNQRTLDP--  239 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHHTTCCT--
T ss_pred             HHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence            9999975422   22232222222211        111222   3342 23445566778888889988887653221  


Q ss_pred             CCCcccHHHHHHhhhcc----CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCC
Q 011873          250 EPEHKDILSLLLLEKNK----DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGP  325 (475)
Q Consensus       250 ~~~~~d~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~  325 (475)
                       ....|+++.++....+    .+..++++++.+++.++++||+|||+++++|++++|++||++|+||++|++++++   .
T Consensus       240 -~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~---~  315 (476)
T 2fdv_A          240 -NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG---K  315 (476)
T ss_dssp             -TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---S
T ss_pred             -CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhc---C
Confidence             2347999999876432    2345899999999999999999999999999999999999999999999999985   2


Q ss_pred             CCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCC
Q 011873          326 DELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQ  404 (475)
Q Consensus       326 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~  404 (475)
                      ++.++++++++||||+|||+|+||++||++ +++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+
T Consensus       316 ~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l  395 (476)
T 2fdv_A          316 NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL  395 (476)
T ss_dssp             SSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGB
T ss_pred             CCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhC
Confidence            456899999999999999999999999999 6899999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc----cc-ccCccCCCCCCcceEeeeCC
Q 011873          405 GND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE----KM-IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       405 ~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~----~~-~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +++   ..+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++..    .. ....+..| .++.|++++|+
T Consensus       396 ~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 2fdv_A          396 NEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFLPRH  473 (476)
T ss_dssp             CTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEEEC-
T ss_pred             CCCCCCCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEEecc
Confidence            753   2356899999999999999999999999999999999999875432    11 23445667 57999999985


No 9  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=7.2e-74  Score=557.13  Aligned_cols=434  Identities=17%  Similarity=0.321  Sum_probs=345.7

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-  107 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-  107 (475)
                      +.+.||||+++|++||++.+..    ++++.++.+++++||+ +|++++++.++++|+||+.+++++.++...|.+... 
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~   82 (476)
T 1po5_A            8 KGKLPPGPSPLPVLGNLLQMDR----KGLLRSFLRLREKYGD-VFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKI   82 (476)
T ss_dssp             -CCCCCCSCCBTTTBTGGGCCT----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCG
T ss_pred             CCCCCcCCCCCCccccHHhccC----CcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence            4468999999999999998732    7789999999999999 999999888899999999999999765545543221 


Q ss_pred             hhhhhhcCCCCCCC-CchHHHHHHHHhhccCChh--HHHHHHHHHHHHHHHHHHhhhc-CCCcEEehhhHHHHHHHHHHH
Q 011873          108 RIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPN--ALRRYVGMMDANAKRHLRKYWD-GNDVVKVHDLSRKFIFALCSE  183 (475)
Q Consensus       108 ~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~--~l~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~~~~~~  183 (475)
                      .......+..++++ +|+.|+++|+++.+.|+..  .++.+.+.+.+.+.++++++.. .++++|+.+++..+++++++.
T Consensus        83 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~  162 (476)
T 1po5_A           83 AVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICS  162 (476)
T ss_dssp             GGGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence            11222223347777 9999999999999998866  5677889999999988886432 356899999999999999999


Q ss_pred             HhhcCCCCchhHHHHHH---HHHHHhhh--------hhcCc---CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 011873          184 LMYNIHDTRTADELENL---AHCIMTEF--------FIIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR  249 (475)
Q Consensus       184 ~~fG~~~~~~~~~~~~~---~~~~~~~~--------~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  249 (475)
                      ++||.+.+....++...   +.......        ..+|.   ++|. ..++..++.+.+.+++.+.++++++....  
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--  239 (476)
T 1po5_A          163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG-THRQIYRNLQEINTFIGQSVEKHRATLDP--  239 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSC-SHHHHHHHHHHHHHHHHHHHHHHHTTCCT--
T ss_pred             HHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence            99998654322233222   22222110        01221   2333 12445566778888889988887653221  


Q ss_pred             CCCcccHHHHHHhhhcc----CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCC
Q 011873          250 EPEHKDILSLLLLEKNK----DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGP  325 (475)
Q Consensus       250 ~~~~~d~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~  325 (475)
                       ....|+++.++....+    .+..++++++.+++.++++||+|||+++++|++++|++||++|+||++|++++++   .
T Consensus       240 -~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~---~  315 (476)
T 1po5_A          240 -SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG---S  315 (476)
T ss_dssp             -TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---S
T ss_pred             -CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---C
Confidence             2346899988854321    1234789999999999999999999999999999999999999999999999985   2


Q ss_pred             CCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCC
Q 011873          326 DELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQ  404 (475)
Q Consensus       326 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~  404 (475)
                      ++.++++++++||||+|||+|+||++||++ +++|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||+
T Consensus       316 ~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l  395 (476)
T 1po5_A          316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL  395 (476)
T ss_dssp             SSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGB
T ss_pred             CCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhC
Confidence            457899999999999999999999999999 6899999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc----c-ccCccCCCCCCcceEeeeCC
Q 011873          405 GND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK----M-IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       405 ~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~----~-~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +++   ..+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++...    . ....+..| .++.|++++|+
T Consensus       396 ~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 1po5_A          396 DANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLARH  473 (476)
T ss_dssp             CTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEEECC
T ss_pred             CCCCCccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEEecC
Confidence            753   23568999999999999999999999999999999999998754321    1 23445667 68999999985


No 10 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=1.1e-73  Score=556.29  Aligned_cols=434  Identities=16%  Similarity=0.240  Sum_probs=339.0

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-  107 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-  107 (475)
                      +.+.||||+++|++||+..+..    ++++.++.+++++||+ +|++++++.+.++|+||+.+++++.++...|.+... 
T Consensus         9 ~~~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~   83 (477)
T 1r9o_A            9 RGKLPPGPTPLPVIGNILQIGI----KDISKSLTNLSKVYGP-VFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIF   83 (477)
T ss_dssp             CCBCCCCSSSCC-----CCBCH----HHHHHHHHHHHHHHCS-EEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCC
T ss_pred             CCCCCCCCCCCceeccHhhcCC----CChHHHHHHHHHHhCC-EEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcc
Confidence            3468999999999999988732    6688899999999999 999999888999999999999999765444543211 


Q ss_pred             hhhhhhcCCCCCCC-CchHHHHHHHHhhccCChh--HHHHHHHHHHHHHHHHHHhhhc-CCCcEEehhhHHHHHHHHHHH
Q 011873          108 RIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPN--ALRRYVGMMDANAKRHLRKYWD-GNDVVKVHDLSRKFIFALCSE  183 (475)
Q Consensus       108 ~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~--~l~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~~~~~~  183 (475)
                      .......+..++++ +|+.|+++|+++.+.|+..  .++.+.+.+.+.+.++++++.. .++++|+.+++..+++++++.
T Consensus        84 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~  163 (477)
T 1r9o_A           84 PLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICS  163 (477)
T ss_dssp             SCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence            11122223336777 9999999999999999876  4567889999999988886432 346899999999999999999


Q ss_pred             HhhcCCCCchhHH---HHHHHHHHHhhhh--------hcCc---CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 011873          184 LMYNIHDTRTADE---LENLAHCIMTEFF--------IIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKR  249 (475)
Q Consensus       184 ~~fG~~~~~~~~~---~~~~~~~~~~~~~--------~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  249 (475)
                      ++||.+.+....+   +.+.+........        .+|.   ++|. ..++..++.+.+.+++.+++++++++...  
T Consensus       164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--  240 (477)
T 1r9o_A          164 IIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPG-THNKLLKNVAFMKSYILEKVKEHQESMDM--  240 (477)
T ss_dssp             HHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCT--
T ss_pred             HHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHhccCC--
Confidence            9999865432222   2222222221111        1221   2222 12345566777888889999888764221  


Q ss_pred             CCCcccHHHHHHhhhc----cCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCC
Q 011873          250 EPEHKDILSLLLLEKN----KDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGP  325 (475)
Q Consensus       250 ~~~~~d~~~~ll~~~~----~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~  325 (475)
                       ....|+++.++....    ..+..++++++.+++.++++||+|||+++++|++++|++||++|+||++|++++++   .
T Consensus       241 -~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~  316 (477)
T 1r9o_A          241 -NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG---R  316 (477)
T ss_dssp             -TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---S
T ss_pred             -CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC---C
Confidence             234689998885432    12345899999999999999999999999999999999999999999999999985   2


Q ss_pred             CCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCC
Q 011873          326 DELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQ  404 (475)
Q Consensus       326 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~  404 (475)
                      ++.++++++++||||+|||+|+||++||++ +++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+
T Consensus       317 ~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l  396 (477)
T 1r9o_A          317 NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL  396 (477)
T ss_dssp             SSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGB
T ss_pred             CCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceE
Confidence            457899999999999999999999999999 6899999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc----c-ccCccCCCCCCcceEeeeCC
Q 011873          405 GND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK----M-IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       405 ~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~----~-~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +++   ..+..|+|||+|+|.|||++||.+|++++++.|+++|++++.++...    . ....+..| .++.|++++|+
T Consensus       397 ~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~  474 (477)
T 1r9o_A          397 DEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFIPIH  474 (477)
T ss_dssp             CTTSCBCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEEECC
T ss_pred             CCCCCcCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEEEec
Confidence            753   23568999999999999999999999999999999999998754321    1 23445667 67999999985


No 11 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=3.2e-74  Score=555.83  Aligned_cols=432  Identities=18%  Similarity=0.262  Sum_probs=333.3

Q ss_pred             CCCCC-CCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc-hh
Q 011873           31 NLPPG-RKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL-PR  108 (475)
Q Consensus        31 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-~~  108 (475)
                      ++||| |+++|++||+..+.     .+++.++.+++++||+ +|++++++.++++|+||+++++++.+++..|+... ..
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~-----~~~~~~~~~l~~~yG~-v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~   77 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR-----TDPIGLMQRVRDELGD-VGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYP   77 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT-----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCG
T ss_pred             CCCCCCCCCCCCccCHHHHh-----hChHHHHHHHHHHcCC-EEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchh
Confidence            57887 88999999999886     6789999999999999 99999988889999999999999977654444321 12


Q ss_pred             hhhhhcCCCCCCCCchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhcC
Q 011873          109 IIENSFKSSPNITLQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYNI  188 (475)
Q Consensus       109 ~~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~  188 (475)
                      .....+|. +++.+++.|+++|+++++.|+..+++++.+.+.+.+.++++. +..++++|+.+++..+++++++.++||.
T Consensus        78 ~~~~~~g~-~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-~~~~~~vd~~~~~~~~~~~vi~~~~fG~  155 (455)
T 2cib_A           78 FMTPIFGE-GVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIAD-WGEAGEIDLLDFFAELTIYTSSACLIGK  155 (455)
T ss_dssp             GGHHHHC---------------------CCHHHHHHHHHHHHHHHHHHHTT-CCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHhhcCC-ccccCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHH-hCCCCcEeHHHHHHHHHHHHHHHHHcCC
Confidence            23334554 443488999999999999999999999999999999999985 5555689999999999999999999998


Q ss_pred             CCCc-hhHHHHHHHHHHHhhhhh---cCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhh
Q 011873          189 HDTR-TADELENLAHCIMTEFFI---IPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEK  264 (475)
Q Consensus       189 ~~~~-~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~  264 (475)
                      +... ...++...+..+...+..   +..++|...+++..++.+.+.+++.+++++++++....  ....|+++.+++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--~~~~dll~~ll~~~  233 (455)
T 2cib_A          156 KFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTD--KSDRDMLDVLIAVK  233 (455)
T ss_dssp             HHHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHCB
T ss_pred             CcchhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCC--CCcccHHHHHHHhh
Confidence            6432 123444444444332211   11133433344555667788888899888877532110  12339999999865


Q ss_pred             ccCCCC-CCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHH
Q 011873          265 NKDGED-LTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNV  343 (475)
Q Consensus       265 ~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~  343 (475)
                      .+++.. ++++++..++..+++||+|||+++++|++++|++||++|+||++|++++++.   ++.++++++++||||+||
T Consensus       234 ~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lpyl~a~  310 (455)
T 2cib_A          234 AETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD---GRSVSFHALRQIPQLENV  310 (455)
T ss_dssp             CTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGG---CCCHHHHTTSCCHHHHHH
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---CCCCCHHHHhcCHHHHHH
Confidence            444444 8999999999999999999999999999999999999999999999999862   356889999999999999


Q ss_pred             HHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCC----CCCcccccCCC
Q 011873          344 ISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI----VPFSYVPFGAG  419 (475)
Q Consensus       344 i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~----~~~~~~~Fg~G  419 (475)
                      |+|+||++||++.++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++.    .+..|+|||+|
T Consensus       311 i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G  390 (455)
T 2cib_A          311 LKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAG  390 (455)
T ss_dssp             HHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCG
T ss_pred             HHHHHhcCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCC
Confidence            99999999998888999999999999999999999999999999999999999999999997532    25679999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcccc---cCccCCCCCCcceEeeeCC
Q 011873          420 PHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMI---RNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       420 ~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~~~~p~~~~~v~~~~r~  475 (475)
                      +|.|||++||.+|++++++.|+++|++++..++....   ...+..|.+++.|++++|+
T Consensus       391 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          391 RHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEECc
Confidence            9999999999999999999999999999864322221   2345667889999999985


No 12 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=1.6e-73  Score=551.87  Aligned_cols=430  Identities=18%  Similarity=0.329  Sum_probs=356.6

Q ss_pred             CCCCCCCCC-CcccchhhhhhhccccCChhHHHHHHHHhhc-CcceeeccCCCcEEEecCcccchhhhccCCcccccCc-
Q 011873           30 QNLPPGRKG-WPFIGETLEYHALSKKGCIEKFMSQRMQKYS-SKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL-  106 (475)
Q Consensus        30 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-  106 (475)
                      .++||||++ +|++||++.+.     .+++.++.+++++|| + +|++++++.++++|+||+++++++.++...++... 
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~~-i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~   75 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFG-----KSPLGFMQECKRQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREV   75 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHH-----HCHHHHHHHHHHHHTCS-EEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGG
T ss_pred             CCCCCCCCCCcchhccHHHHc-----cCHHHHHHHHHHHhCCC-eEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhh
Confidence            357888655 99999999987     678999999999999 8 99999999999999999999999988766665443 


Q ss_pred             hhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc-CCCcEEehhhHHHHHHHHHHHH
Q 011873          107 PRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD-GNDVVKVHDLSRKFIFALCSEL  184 (475)
Q Consensus       107 ~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~~~~~~~  184 (475)
                      .......+|.+.++. +++.|+++|+++++.|+..+++++.+.+.+++.+++++.+. .++++|+.+++..+++++++.+
T Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~  155 (450)
T 3gw9_A           76 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQC  155 (450)
T ss_dssp             GGGGHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHH
Confidence            223445667633334 89999999999999999999999999999999999984454 5678999999999999999999


Q ss_pred             hhcCCCCch--hHHHHHHHHHHHhhhhh----cCc--CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccH
Q 011873          185 MYNIHDTRT--ADELENLAHCIMTEFFI----IPV--NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDI  256 (475)
Q Consensus       185 ~fG~~~~~~--~~~~~~~~~~~~~~~~~----~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~  256 (475)
                      +||.+....  ..++.+.+..+...+..    +|+  ++|....++..++.+.+.+++.++++++++....+ .....|+
T Consensus       156 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~~~d~  234 (450)
T 3gw9_A          156 LFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNK-DSSTSDL  234 (450)
T ss_dssp             HSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SCCCCSH
T ss_pred             HcCcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-CCccchH
Confidence            999864321  34444444444332221    221  33443344556777888899999998887543222 2456899


Q ss_pred             HHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHh--hCHHHHHHHHHHHHHHhccCCCCCCCChhhh
Q 011873          257 LSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLA--ELPEIYEQVLREQMEIANSKGPDELLSFDDL  334 (475)
Q Consensus       257 ~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l  334 (475)
                      ++.+++...+++..++++++..++..+++||+|||+++++|++++|+  .||++|+|+++|++++      +..++++++
T Consensus       235 l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~------~~~~~~~~~  308 (450)
T 3gw9_A          235 LSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF------PAQLNYNNV  308 (450)
T ss_dssp             HHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC------CSSCCHHHH
T ss_pred             HHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc------cCCCChHHH
Confidence            99999876555666999999999999999999999999999999999  9999999999999876      346899999


Q ss_pred             -ccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 011873          335 -KRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSY  413 (475)
Q Consensus       335 -~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~  413 (475)
                       ++||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||+.   ..+..|
T Consensus       309 ~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~---~~~~~~  385 (450)
T 3gw9_A          309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE---KVEGAF  385 (450)
T ss_dssp             HHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC---SSTTCC
T ss_pred             HHhcHHHHHHHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc---CCCCce
Confidence             9999999999999999999998889999999999999999999999999999999999999999999932   246789


Q ss_pred             cccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCC-ccccc-CccCCCC-CCcceEeeeCC
Q 011873          414 VPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPD-EKMIR-NPNLMPE-KGLPVRLYPNN  475 (475)
Q Consensus       414 ~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~-~~~~~-~~~~~p~-~~~~v~~~~r~  475 (475)
                      +|||+|+|.|||++||.+|++++++.|+++|+|++.++. ....+ ..+..|+ .++.|++++|+
T Consensus       386 ~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          386 IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             CTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEECC
T ss_pred             eCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeecC
Confidence            999999999999999999999999999999999997442 22222 3466687 79999999995


No 13 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=8.7e-74  Score=559.67  Aligned_cols=438  Identities=15%  Similarity=0.206  Sum_probs=338.3

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc
Q 011873           27 PTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL  106 (475)
Q Consensus        27 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  106 (475)
                      ++..++||||+++|++||++.+..   .+.++..+.+|+++||+ +|++++++.++++|+||+++++++.++...|.++.
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~---~~~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp   79 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPR---HGHMHNNFFKLQKKYGP-IYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRP   79 (494)
T ss_dssp             --------CCBCCCEEEEESSCTT---SSCHHHHHHHTHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCC
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCC---CCchhHHHHHHHHHcCC-EEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence            345678999999999999998753   14678899999999999 99999999999999999999999998877776554


Q ss_pred             hhhhhhhcC--CCCCCC--CchHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHHhhh-cCCCcEEehhhHHHHHHH
Q 011873          107 PRIIENSFK--SSPNIT--LQDEFNSLRRVIGSFTEP--NALRRYVGMMDANAKRHLRKYW-DGNDVVKVHDLSRKFIFA  179 (475)
Q Consensus       107 ~~~~~~~~g--~~~~~~--~~~~~~~~R~~~~~~f~~--~~l~~~~~~~~~~~~~~l~~~~-~~~~~vd~~~~~~~~~~~  179 (475)
                      .......++  ..+++.  +|+.|+++|+++++.|+.  ..++++.+.+.+++.++++.+. ..++++|+..++..++++
T Consensus        80 ~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~d  159 (494)
T 3swz_A           80 QMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTN  159 (494)
T ss_dssp             CCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHH
T ss_pred             CcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHH
Confidence            332333333  235655  699999999999999873  4567788888888888777532 356789999999999999


Q ss_pred             HHHHHhhcCCCCchhH---HHHHHHHHHHhhhh------hcCc--CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhc
Q 011873          180 LCSELMYNIHDTRTAD---ELENLAHCIMTEFF------IIPV--NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEK  248 (475)
Q Consensus       180 ~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~------~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  248 (475)
                      +++.++||........   .+......+...+.      .+|+  ++|....++..+..+.+.+++.++++++++...  
T Consensus       160 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  237 (494)
T 3swz_A          160 VISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFR--  237 (494)
T ss_dssp             HHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred             HHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence            9999999987643222   12222222222111      1221  233322333444555566666666666554322  


Q ss_pred             cCCCcccHHHHHHhhhcc----------CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011873          249 REPEHKDILSLLLLEKNK----------DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQME  318 (475)
Q Consensus       249 ~~~~~~d~~~~ll~~~~~----------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~  318 (475)
                       .....|+++.+++...+          ++..++++++..++..+++||+|||+++++|++++|+.||++|+|+++|+++
T Consensus       238 -~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  316 (494)
T 3swz_A          238 -SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ  316 (494)
T ss_dssp             -TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             -ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence             13356899999976422          1224889999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCC
Q 011873          319 IANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEK  397 (475)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~  397 (475)
                      +++   .++.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+||++
T Consensus       317 v~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  393 (494)
T 3swz_A          317 NVG---FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQ  393 (494)
T ss_dssp             HTC---SSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTS
T ss_pred             hcC---CCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCccc
Confidence            985   35678999999999999999999999999995 78999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC-----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCccc--cc--CccCCCCCCcc
Q 011873          398 FDPSRYQGND-----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKM--IR--NPNLMPEKGLP  468 (475)
Q Consensus       398 F~P~R~~~~~-----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~--~~--~~~~~p~~~~~  468 (475)
                      |+||||++++     .....|+|||+|+|.|||++||.+|++++++.|+++|+|++.++....  ..  ..+..| .+++
T Consensus       394 F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~~~  472 (494)
T 3swz_A          394 FMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-DSFK  472 (494)
T ss_dssp             CCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-CCCC
T ss_pred             CCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-CCcE
Confidence            9999999764     244689999999999999999999999999999999999987543211  11  233445 5799


Q ss_pred             eEeeeCC
Q 011873          469 VRLYPNN  475 (475)
Q Consensus       469 v~~~~r~  475 (475)
                      |++++|+
T Consensus       473 v~~~~R~  479 (494)
T 3swz_A          473 VKIKVRQ  479 (494)
T ss_dssp             EEEEECH
T ss_pred             EEEEEcC
Confidence            9999984


No 14 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=2.7e-74  Score=563.90  Aligned_cols=439  Identities=17%  Similarity=0.224  Sum_probs=337.0

Q ss_pred             HHhhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCC
Q 011873           20 YVIIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEH   99 (475)
Q Consensus        20 ~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~   99 (475)
                      +++.+...++.++||||++      ++.+..    ++++..+.+|+++||+ +|++++++.++++|+||+++++++.++.
T Consensus        18 ~~~~~~~~~~~~lPPGP~~------l~~~~~----~~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~   86 (496)
T 3qz1_A           18 LLWGRWKLRNLHLPPLVPG------FLHLLQ----PNLPIHLLSLTQKLGP-VYRLRLGLQEVVVLNSKRTIEEAMIRKW   86 (496)
T ss_dssp             -----------CCCCBCSC------SCTTSS----SCHHHHHHHGGGTSCS-EEEECSSSSCEEEECSTTHHHHTTTTSC
T ss_pred             HHHhhhhccCCCCCcCCcc------ccccCC----CcchHHHHHHHHHhCC-EEEEEeCCcCEEEECCHHHHHHHHHhCc
Confidence            3333444567789999986      333332    7889999999999999 9999999999999999999999998876


Q ss_pred             cccccCchh-hhhhh-cCCCCCCC-C-chHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh-cCCCcEEehhhHH
Q 011873          100 KLFKPWLPR-IIENS-FKSSPNIT-L-QDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW-DGNDVVKVHDLSR  174 (475)
Q Consensus       100 ~~~~~~~~~-~~~~~-~g~~~~~~-~-~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~vd~~~~~~  174 (475)
                      ..|..+... ..... .|..++++ + |+.|+++|+++++.|+...++.+.+.+.+.+.++++... ..++++|+.+++.
T Consensus        87 ~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~  166 (496)
T 3qz1_A           87 VDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFS  166 (496)
T ss_dssp             STTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHT
T ss_pred             HhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHH
Confidence            556543221 12222 23337777 7 999999999999999876677899999999999988643 3467899999999


Q ss_pred             HHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhh--------hhhcC--cCCCCcccchhhhhhhHHHHHHHHHHHHHHHH
Q 011873          175 KFIFALCSELMYNIHDTRTADELENLAHCIMTE--------FFIIP--VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLE  244 (475)
Q Consensus       175 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  244 (475)
                      .+++++++.++||...+.....+.+.+......        ...+|  .++|....++..++.+.+.+++.+.+++++++
T Consensus       167 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~  246 (496)
T 3qz1_A          167 LLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKES  246 (496)
T ss_dssp             HHHHHHTTTTSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999983222222333333222111        11122  23444344556677788888888888888765


Q ss_pred             HhhccCCCcccHHHHHHhhhccC----C-CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011873          245 IEEKREPEHKDILSLLLLEKNKD----G-EDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEI  319 (475)
Q Consensus       245 ~~~~~~~~~~d~~~~ll~~~~~~----~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~  319 (475)
                      ...   ....|+++.+++...+.    + ..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       247 ~~~---~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  323 (496)
T 3qz1_A          247 MVA---GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRE  323 (496)
T ss_dssp             CCS---SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             ccC---CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            332   24578999999765332    1 258999999999999999999999999999999999999999999999999


Q ss_pred             hccCC-CCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCC
Q 011873          320 ANSKG-PDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEK  397 (475)
Q Consensus       320 ~~~~~-~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~  397 (475)
                      ++..+ .++.+ ++++++||||+|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++|+||++|+||++
T Consensus       324 ~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  402 (496)
T 3qz1_A          324 LGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHE  402 (496)
T ss_dssp             HCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred             hCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCccc
Confidence            86321 13456 99999999999999999999999995 78999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCC--cccc----cCccCCCCCCcceEe
Q 011873          398 FDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPD--EKMI----RNPNLMPEKGLPVRL  471 (475)
Q Consensus       398 F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~--~~~~----~~~~~~p~~~~~v~~  471 (475)
                      |+||||++++. ...|+|||+|+|.|||++||.+|++++++.|+++|++++.++.  ....    ...+..|. ++.|++
T Consensus       403 F~PeR~l~~~~-~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~  480 (496)
T 3qz1_A          403 FRPDRFLEPGA-NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRL  480 (496)
T ss_dssp             CCCCCCC---C-CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCC
T ss_pred             CCcccccCCCC-CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-ceEEEE
Confidence            99999998643 3489999999999999999999999999999999999987432  1112    23345555 799999


Q ss_pred             eeCC
Q 011873          472 YPNN  475 (475)
Q Consensus       472 ~~r~  475 (475)
                      ++|+
T Consensus       481 ~~R~  484 (496)
T 3qz1_A          481 QPRG  484 (496)
T ss_dssp             CCC-
T ss_pred             EEec
Confidence            9995


No 15 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=1e-72  Score=549.24  Aligned_cols=436  Identities=19%  Similarity=0.278  Sum_probs=344.7

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCC--hhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGC--IEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~--~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      ++.++||||+++|++||+..+..    ..  ++.++.+++++||+ +|++++++.++++|+||+.+++++.++...|+..
T Consensus         9 ~~~~lpPgP~~~p~~G~~~~~~~----~~~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~   83 (481)
T 3czh_A            9 RPMGFPPGPPGLPFIGNIYSLAA----SSELPHVYMRKQSQVYGE-IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR   83 (481)
T ss_dssp             ---CCCCCCCCBTTTBHHHHHHH----CSSCHHHHHHHHHHHHCS-EEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBC
T ss_pred             CCCCCCCCCCCCcccccHhhcCc----ccCcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhhchHhhCCC
Confidence            45678999999999999998863    33  88999999999999 9999998888999999999999998775555533


Q ss_pred             ch-hhhhhhcCCCC-CCC-CchHHHHHHHHhhccCChhHH--HHHHHHHHHHHHHHHHhhhc-CCCcEEehhhHHHHHHH
Q 011873          106 LP-RIIENSFKSSP-NIT-LQDEFNSLRRVIGSFTEPNAL--RRYVGMMDANAKRHLRKYWD-GNDVVKVHDLSRKFIFA  179 (475)
Q Consensus       106 ~~-~~~~~~~g~~~-~~~-~~~~~~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~~  179 (475)
                      .. .....+.+..+ ++. +|+.|+++|+++++.|+...+  ..+.+.+.+.+.++++.... .++++|+.+++..++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~  163 (481)
T 3czh_A           84 PCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN  163 (481)
T ss_dssp             CCCHHHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHH
T ss_pred             CCcHHHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence            21 22223333335 444 899999999999999875543  56888999999888886433 34689999999999999


Q ss_pred             HHHHHhhcCCCCchh---HHHHHHHHHHHhh--------hhhcCc--CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHh
Q 011873          180 LCSELMYNIHDTRTA---DELENLAHCIMTE--------FFIIPV--NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIE  246 (475)
Q Consensus       180 ~~~~~~fG~~~~~~~---~~~~~~~~~~~~~--------~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  246 (475)
                      +++.++||.+.+...   .++.+.+..+...        ...+|+  ++|....++..++.+.+.+++.+++++++++..
T Consensus       164 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (481)
T 3czh_A          164 ITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK  243 (481)
T ss_dssp             HHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999998754222   2222222222211        111232  234333445566677788888998888765322


Q ss_pred             hccCCCcccHHHHHHhhhcc----CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcc
Q 011873          247 EKREPEHKDILSLLLLEKNK----DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANS  322 (475)
Q Consensus       247 ~~~~~~~~d~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~  322 (475)
                      .   ....|+++.+++...+    .+..++++++..++.++++||+|||+++++|++++|++||++|+||++|++++++ 
T Consensus       244 ~---~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~-  319 (481)
T 3czh_A          244 P---QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG-  319 (481)
T ss_dssp             T---TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC-
T ss_pred             C---CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcC-
Confidence            1   2346899999876432    1335899999999999999999999999999999999999999999999999985 


Q ss_pred             CCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 011873          323 KGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPS  401 (475)
Q Consensus       323 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~  401 (475)
                        .++.++++++++||||+|||+|+||++||++ +++|.+++|++++||.||||+.|.++.+++|+||++|+||++|+||
T Consensus       320 --~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe  397 (481)
T 3czh_A          320 --PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE  397 (481)
T ss_dssp             --SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGG
T ss_pred             --CCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCC
Confidence              3467899999999999999999999999999 6789999999999999999999999999999999999999999999


Q ss_pred             CCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-cc--ccCccCCCCCCcceEeeeCC
Q 011873          402 RYQGND---IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KM--IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       402 R~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~--~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ||++++   ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. ..  .......|. ...+.++||.
T Consensus       398 R~l~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~  476 (481)
T 3czh_A          398 RFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-PYLICAERRH  476 (481)
T ss_dssp             GGBCTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-CCCBEEEECC
T ss_pred             ceeCCCCCCcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-ceEEEEEecc
Confidence            999753   3456899999999999999999999999999999999999865421 11  223455565 5889999883


No 16 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=3.2e-73  Score=550.76  Aligned_cols=429  Identities=23%  Similarity=0.373  Sum_probs=355.1

Q ss_pred             CCCCCCCCC-CCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC
Q 011873           27 PTTQNLPPG-RKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        27 ~~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      .++.++||| |+++|++||++.+.     .+++.++.+++++||+ +|+++++|.+.++|++++++++++.++...+...
T Consensus         7 ~~~~~~PPg~P~~lP~iG~l~~~~-----~~~~~~~~~~~~~yG~-v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~   80 (461)
T 3i3k_A            7 PAGVKSPPYIFSPIPFLGHAIAFG-----KSPIEFLENAYEKYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAE   80 (461)
T ss_dssp             ---CCCCCBCCCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESH
T ss_pred             CCCCCCCCCCCCCCCccccHHhhc-----cCHHHHHHHHHHHhCC-EEEEEecCceEEEEeChHHHHHHHhccccccccc
Confidence            356678999 89999999999987     6789999999999999 9999999999999999999999998776544422


Q ss_pred             --chhhhhhhcCCCCCCC--CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHH
Q 011873          106 --LPRIIENSFKSSPNIT--LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALC  181 (475)
Q Consensus       106 --~~~~~~~~~g~~~~~~--~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~  181 (475)
                        .......++|. +++.  +|+.|+++|+++.+.|+...++++.+.+.+++.+++++ +..+..+|+.+.+..++++++
T Consensus        81 ~~~~~~~~~~~g~-g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~-l~~~~~~dl~~~~~~~~~~~~  158 (461)
T 3i3k_A           81 DVYSRLTTPVFGK-GVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFES-WGESGEKNVFEALSELIILTA  158 (461)
T ss_dssp             HHHHHHHHHHHCT-TSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGG-GCSEEEEEHHHHHHHHHHHHH
T ss_pred             hHHHHhhhhhcCC-eeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHH-hhhcCCcCHHHHHHHHHHHHH
Confidence              12233455676 5544  79999999999999999999999999999999999985 655667899999999999999


Q ss_pred             HHHhhcCCCCch-hHHHHHHHHHHHhhh----hhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccH
Q 011873          182 SELMYNIHDTRT-ADELENLAHCIMTEF----FIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDI  256 (475)
Q Consensus       182 ~~~~fG~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~  256 (475)
                      +.++||.+.... ...+...+..+...+    ..+|.++|...+++..++.+.+.+++.+.++++++.     .....|+
T Consensus       159 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~d~  233 (461)
T 3i3k_A          159 SHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS-----QEKIDDI  233 (461)
T ss_dssp             HHHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCCCSH
T ss_pred             HHHHccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccccccH
Confidence            999999754321 223333444333222    245667776556666777788888888888877542     1345799


Q ss_pred             HHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhcc
Q 011873          257 LSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKR  336 (475)
Q Consensus       257 ~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~  336 (475)
                      ++.+++...+++..++++++..++..+++||+|||+++++|++++|+.||++|+|+++|++++++.  ....++.+++++
T Consensus       234 l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~--~~~~~~~~~~~~  311 (461)
T 3i3k_A          234 LQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE--NLPPLTYDQLKD  311 (461)
T ss_dssp             HHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCT--TCCCCCHHHHHT
T ss_pred             HHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC--CCCCCCHHHHhc
Confidence            999998765555669999999999999999999999999999999999999999999999999863  234678999999


Q ss_pred             CccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC---CCCCcc
Q 011873          337 MKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND---IVPFSY  413 (475)
Q Consensus       337 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~---~~~~~~  413 (475)
                      ||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++.+   ..+..|
T Consensus       312 l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~  391 (461)
T 3i3k_A          312 LNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAY  391 (461)
T ss_dssp             CHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSSS
T ss_pred             ChHHHHHHHHHHhcCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCcce
Confidence            99999999999999999988899999999999999999999999999999999999999999999999864   246789


Q ss_pred             cccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-cccc-CccCCCCCCcceE
Q 011873          414 VPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIR-NPNLMPEKGLPVR  470 (475)
Q Consensus       414 ~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~-~~~~~p~~~~~v~  470 (475)
                      +|||+|+|.|||++||.+|++++++.|+++|+|++.++.. .... ..+..|.+++.|.
T Consensus       392 ~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          392 VPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             CTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            9999999999999999999999999999999999876532 2222 3356677765554


No 17 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=8e-74  Score=562.35  Aligned_cols=438  Identities=16%  Similarity=0.278  Sum_probs=323.8

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC
Q 011873           26 KPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        26 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      +.++.+.||||+++|++||++.+.     ++++.++.+|+++||+ +|++++++.++++|+||+++++++.++...|..+
T Consensus         4 ~~~~~~~pPgP~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r   77 (507)
T 3pm0_A            4 KTSSKGKPPGPFAWPLIGNAAAVG-----QAAHLSFARLARRYGD-VFQIRLGSCPIVVLNGERAIHQALVQQGSAFADR   77 (507)
T ss_dssp             -----------------------------CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBC
T ss_pred             ccCCCCCCcCCCCCCeeCchhhcC-----ccHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCC
Confidence            344667899999999999999886     7889999999999999 9999999999999999999999997766556533


Q ss_pred             ch-hhhhhhcCCCCCC-C-CchHHHHHHHHhhccCChhH------HHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhH
Q 011873          106 LP-RIIENSFKSSPNI-T-LQDEFNSLRRVIGSFTEPNA------LRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLS  173 (475)
Q Consensus       106 ~~-~~~~~~~g~~~~~-~-~~~~~~~~R~~~~~~f~~~~------l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~  173 (475)
                      .. .......+..+++ . +|+.|+++|+++++.|+...      .+.+.+.+.+.+.++++...   .+++++|+.+++
T Consensus        78 ~~~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~  157 (507)
T 3pm0_A           78 PSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLT  157 (507)
T ss_dssp             CCCHHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHH
T ss_pred             CcchHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHH
Confidence            22 2222222333564 4 79999999999988664322      34488888888888777532   346789999999


Q ss_pred             HHHHHHHHHHHhhcCCCCchhHHHHHH---HHHHHhhhh------hcCc--CCCCc---ccchhhhhhhHHHHHHHHHHH
Q 011873          174 RKFIFALCSELMYNIHDTRTADELENL---AHCIMTEFF------IIPV--NIPGT---KFGRAVRAGREFHQRFRNMIK  239 (475)
Q Consensus       174 ~~~~~~~~~~~~fG~~~~~~~~~~~~~---~~~~~~~~~------~~~~--~~p~~---~~~~~~~~~~~~~~~~~~~i~  239 (475)
                      ..+++++++.++||.+.+....++...   +..+...+.      .+|+  ++|..   ..++..++.+.+.+++.+.++
T Consensus       158 ~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (507)
T 3pm0_A          158 VVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFL  237 (507)
T ss_dssp             HHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999765433332222   222221111      1221  23322   234455566777788888888


Q ss_pred             HHHHHHhhccCCCcccHHHHHHhhhcc--C------CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHH
Q 011873          240 QRRLEIEEKREPEHKDILSLLLLEKNK--D------GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQ  311 (475)
Q Consensus       240 ~~~~~~~~~~~~~~~d~~~~ll~~~~~--~------~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~k  311 (475)
                      ++++....+  ....|+++.++...+.  +      +..++++++..++..+++||+|||+++++|++++|++||++|+|
T Consensus       238 ~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~k  315 (507)
T 3pm0_A          238 RHCESLRPG--AAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTR  315 (507)
T ss_dssp             HHHHHCCTT--CCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHhccccc--cCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHH
Confidence            877654332  3457899998865321  1      12489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-cccccccccccCceEeCCCCEEEEeccccccCCC
Q 011873          312 VLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREALTEVTIDGYTIPKGFKLHWAVNATHKDPE  390 (475)
Q Consensus       312 l~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~  390 (475)
                      |++|++++++   .++.++++++++||||+|||+|+|||+|+++. ++|.+.+|++++||.||||+.|.++.+++|+||+
T Consensus       316 l~~Ei~~~~~---~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~  392 (507)
T 3pm0_A          316 VQAELDQVVG---RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPL  392 (507)
T ss_dssp             HHHHHHHHTC---TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTT
T ss_pred             HHHHHHHhcC---CCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcc
Confidence            9999999974   34678999999999999999999999999984 7899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCC-----CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccc--cCccCC
Q 011873          391 CFPNPEKFDPSRYQGNDI-----VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMI--RNPNLM  462 (475)
Q Consensus       391 ~~~dp~~F~P~R~~~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~--~~~~~~  462 (475)
                      +|+||++|+||||++++.     .+..|+|||+|+|.|||++||.+|++++++.|+++|+|++.++.. ...  ...+..
T Consensus       393 ~~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  472 (507)
T 3pm0_A          393 KWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIK  472 (507)
T ss_dssp             TCSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEE
T ss_pred             cCCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCcccc
Confidence            999999999999998642     125799999999999999999999999999999999999875432 221  233445


Q ss_pred             CCCCcceEeeeCC
Q 011873          463 PEKGLPVRLYPNN  475 (475)
Q Consensus       463 p~~~~~v~~~~r~  475 (475)
                      |. ++.|++++|+
T Consensus       473 p~-~~~v~~~~R~  484 (507)
T 3pm0_A          473 PK-SFKVNVTLRE  484 (507)
T ss_dssp             EC-SCCEEEEESS
T ss_pred             CC-CcEEEEEEcc
Confidence            55 5799999985


No 18 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=7.2e-73  Score=552.55  Aligned_cols=440  Identities=19%  Similarity=0.279  Sum_probs=346.5

Q ss_pred             cCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCccccc
Q 011873           25 PKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP  104 (475)
Q Consensus        25 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~  104 (475)
                      +..++.+.+|||+++|+. +++.+......++++.++.+++++||+ ||++++++.+.|+|+||+++++++.+++ .|.+
T Consensus         3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~   79 (487)
T 3n9y_A            3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGP-IYREKLGNVESVYVIDPEDVALLFKSEG-PNPE   79 (487)
T ss_dssp             -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHHTCC-SSCC
T ss_pred             CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCc-eeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCC
Confidence            345677889999988875 666664322224688899999999999 9999998889999999999999998765 3433


Q ss_pred             Cch-hh---hhhhc-CCCCCCC-CchHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHhhhc-------CCCcEEeh
Q 011873          105 WLP-RI---IENSF-KSSPNIT-LQDEFNSLRRVIGS-FTEPNALRRYVGMMDANAKRHLRKYWD-------GNDVVKVH  170 (475)
Q Consensus       105 ~~~-~~---~~~~~-g~~~~~~-~~~~~~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~~~-------~~~~vd~~  170 (475)
                      +.. ..   ..... +..+++. +|+.|+++|+++++ .|+.+.++++.+.+.+.+.++++.+..       ++.++|+.
T Consensus        80 r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~  159 (487)
T 3n9y_A           80 RFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDIS  159 (487)
T ss_dssp             CCCCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCH
T ss_pred             CCCCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHH
Confidence            221 11   11121 2336777 99999999999998 499999999999999999888875322       24579999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCc-------hhHHHHHHHHHHHhhhh---hcCc----CCCCcccchhhhhhhHHHHHHHH
Q 011873          171 DLSRKFIFALCSELMYNIHDTR-------TADELENLAHCIMTEFF---IIPV----NIPGTKFGRAVRAGREFHQRFRN  236 (475)
Q Consensus       171 ~~~~~~~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~---~~~~----~~p~~~~~~~~~~~~~~~~~~~~  236 (475)
                      +++..+++++++.++||.+.+.       ...++.+.+..+.....   .+|.    +++...+++..+..+.+.+.+.+
T Consensus       160 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~  239 (487)
T 3n9y_A          160 DDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADI  239 (487)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999987531       12233333333322221   1111    11111223333444556677777


Q ss_pred             HHHHHHHHHhhccC--CCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHH
Q 011873          237 MIKQRRLEIEEKRE--PEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLR  314 (475)
Q Consensus       237 ~i~~~~~~~~~~~~--~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~  314 (475)
                      .++++.++..++..  ....|+++.+++.     ..++++++.+++.++++||+|||+++++|++++|+.||++|+||++
T Consensus       240 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-----~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~  314 (487)
T 3n9y_A          240 YTQNFYWELRQKGSVHHDYRGILYRLLGD-----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRA  314 (487)
T ss_dssp             HHHHHHHHHHHHCCCCSSCCCHHHHHHHS-----CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccchHHHHHHHHhc-----CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            77776655443321  3457899999863     2389999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCC
Q 011873          315 EQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPN  394 (475)
Q Consensus       315 E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~d  394 (475)
                      |++++++.   ++.++++++++||||+|||+|+|||+|+++.++|.+++|++++||.||||+.|.++.+++|+||++|+|
T Consensus       315 Ei~~~~~~---~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d  391 (487)
T 3n9y_A          315 EVLAARHQ---AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD  391 (487)
T ss_dssp             HHHHHHHH---TTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSS
T ss_pred             HHHHhhcc---cccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCC
Confidence            99999863   234569999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC--CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecC-CcccccCccCCCCCCcceEe
Q 011873          395 PEKFDPSRYQGND--IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP-DEKMIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       395 p~~F~P~R~~~~~--~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~p~~~~~v~~  471 (475)
                      |++|+||||++++  ..+..|+|||.|+|.|||++||++|+++++|.|+++|+|++.++ +.......++.|++++.|++
T Consensus       392 p~~F~PeR~l~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~  471 (487)
T 3n9y_A          392 PENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTF  471 (487)
T ss_dssp             TTSCCGGGGTCSCTTSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCEEE
T ss_pred             cccCChhhcCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCceeEE
Confidence            9999999999864  23578999999999999999999999999999999999998754 22444566888999999999


Q ss_pred             eeCC
Q 011873          472 YPNN  475 (475)
Q Consensus       472 ~~r~  475 (475)
                      ++|+
T Consensus       472 ~~r~  475 (487)
T 3n9y_A          472 WPFN  475 (487)
T ss_dssp             EEC-
T ss_pred             EECC
Confidence            9995


No 19 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.2e-72  Score=549.06  Aligned_cols=434  Identities=16%  Similarity=0.238  Sum_probs=337.8

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP  107 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  107 (475)
                      ++.+.||||+++|++||+..+.     ++++..+.+++++||+ +|++++++.++++++||+++++++.++...|.+...
T Consensus        13 ~~lp~~PgP~~~p~~G~~~~~~-----~~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~   86 (495)
T 2hi4_A           13 KGLKSPPEPWGWPLLGHVLTLG-----KNPHLALSRMSQRYGD-VLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPD   86 (495)
T ss_dssp             TTCBCCCCCCCBTTTBTHHHHT-----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCC
T ss_pred             CCCCCCCCCCCCcceeeHHhcC-----ccHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCC
Confidence            3444459999999999998875     6788999999999999 999999888999999999999999876545543321


Q ss_pred             -hhhhhhcCCCCCC-C--CchHHHHHHHHhhccCCh---hHH---H---HHHHHHHHHHHHHHHhhh---cCCCcEEehh
Q 011873          108 -RIIENSFKSSPNI-T--LQDEFNSLRRVIGSFTEP---NAL---R---RYVGMMDANAKRHLRKYW---DGNDVVKVHD  171 (475)
Q Consensus       108 -~~~~~~~g~~~~~-~--~~~~~~~~R~~~~~~f~~---~~l---~---~~~~~~~~~~~~~l~~~~---~~~~~vd~~~  171 (475)
                       .......+..+++ .  +|+.|+++|+++++.|+.   .++   +   .+.+.+.+.+.++++.+.   .+++++|+.+
T Consensus        87 ~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~  166 (495)
T 2hi4_A           87 LYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYN  166 (495)
T ss_dssp             CHHHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHH
T ss_pred             cHHHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHH
Confidence             1222222333543 3  599999999999987542   222   2   678888888888777532   3467899999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCchhHHHHH---HHHHHHhhh------hhcCc--CCCCcccchhhhhhhHHHHHHHHHHHH
Q 011873          172 LSRKFIFALCSELMYNIHDTRTADELEN---LAHCIMTEF------FIIPV--NIPGTKFGRAVRAGREFHQRFRNMIKQ  240 (475)
Q Consensus       172 ~~~~~~~~~~~~~~fG~~~~~~~~~~~~---~~~~~~~~~------~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~  240 (475)
                      ++..+++++++.++||.+.+....++..   ....+....      ..+|.  ++|....++..++.+.+.+++.+.|++
T Consensus       167 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~  246 (495)
T 2hi4_A          167 QVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQE  246 (495)
T ss_dssp             HHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999865422222222   222222111      11221  233323344556677788888999988


Q ss_pred             HHHHHhhccCCCcccHHHHHHhhhcc----CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHH
Q 011873          241 RRLEIEEKREPEHKDILSLLLLEKNK----DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQ  316 (475)
Q Consensus       241 ~~~~~~~~~~~~~~d~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~  316 (475)
                      ++++...   ....|+++.+++...+    .+..++++++.+++.++++||+|||+++++|++++|++||++|+||++|+
T Consensus       247 r~~~~~~---~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei  323 (495)
T 2hi4_A          247 HYQDFDK---NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKEL  323 (495)
T ss_dssp             HHHTCCT---TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             HHHhhcc---cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence            8764321   2347999999864321    12358999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCC
Q 011873          317 MEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNP  395 (475)
Q Consensus       317 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp  395 (475)
                      +++++   .++.++++++++||||+|||+|+||++||++ +++|.+.+|++++||.||||+.|.++.+++||||++|+||
T Consensus       324 ~~v~~---~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP  400 (495)
T 2hi4_A          324 DTVIG---RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDP  400 (495)
T ss_dssp             HHHTT---TSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSST
T ss_pred             HHhcC---CCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCc
Confidence            99985   3457899999999999999999999999999 4789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc---ccccCccCCCCCC
Q 011873          396 EKFDPSRYQGNDI------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMIRNPNLMPEKG  466 (475)
Q Consensus       396 ~~F~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~p~~~  466 (475)
                      ++|+||||++++.      .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..   ......+..|.+.
T Consensus       401 ~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~  480 (495)
T 2hi4_A          401 SEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARC  480 (495)
T ss_dssp             TSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCCCC
T ss_pred             CccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCCCc
Confidence            9999999997542      245789999999999999999999999999999999999865422   1223445667653


Q ss_pred             cceEeeeC
Q 011873          467 LPVRLYPN  474 (475)
Q Consensus       467 ~~v~~~~r  474 (475)
                      ..|+++ |
T Consensus       481 ~~v~~~-R  487 (495)
T 2hi4_A          481 EHVQAR-R  487 (495)
T ss_dssp             CCBEEE-C
T ss_pred             ceEEEE-E
Confidence            388888 7


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=4.6e-73  Score=550.12  Aligned_cols=423  Identities=22%  Similarity=0.331  Sum_probs=322.9

Q ss_pred             CCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCccccc-Cchh
Q 011873           30 QNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP-WLPR  108 (475)
Q Consensus        30 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~-~~~~  108 (475)
                      ..+||||+++|++||++.+.     .+++.++.++++ ||+ +|++++++.++++|+||+.+++++.++ .+... ....
T Consensus        22 ~eppPgP~~~P~iG~~~~~~-----~~p~~~~~~l~~-yGp-v~~~~~g~~~~~vv~~~~~i~~il~~~-~~~~~~~~~~   93 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLA-----RDPLAFMSQLRD-HGD-VVRIKLGPKTVYAVTNPELTGALALNP-DYHIAGPLWE   93 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHH-----HCHHHHHHHHGG-GCS-EEEEEETTEEEEEECSHHHHHHHHHCT-TC--------
T ss_pred             CCCCCCCCCCCcccchHHhc-----cCHHHHHHHHHH-hCC-EEEEEeCCccEEEECCHHHHHHHHhCc-CcccccchHH
Confidence            56799999999999999987     688899999887 999 999999999999999999999999877 33122 2222


Q ss_pred             hhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhc
Q 011873          109 IIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYN  187 (475)
Q Consensus       109 ~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG  187 (475)
                      .....+|..+++. +|+.|+++|+++++.|+.+.++++.+.+.+.+.+++++ +..++++|+.+++..+++++++.++||
T Consensus        94 ~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~d~~~~~~~~~~~vi~~~~~g  172 (467)
T 3dbg_A           94 SLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTER-WQPGKTVDATSESFRVAVRVAARCLLR  172 (467)
T ss_dssp             ----------------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHH-SCTTSCEEHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHH-hccCCcCcHHHHHHHHHHHHHHHHHhC
Confidence            3344566447777 99999999999999999999999999999999999985 666789999999999999999999999


Q ss_pred             CCCCc-hhHHHHHHHHHHHhhhh---hcC----cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHH
Q 011873          188 IHDTR-TADELENLAHCIMTEFF---IIP----VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSL  259 (475)
Q Consensus       188 ~~~~~-~~~~~~~~~~~~~~~~~---~~~----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~  259 (475)
                      .+... ....+...+..+...+.   .+|    .++|....++..++.+.+.+++.+++++++++     .....|+++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~~dll~~  247 (467)
T 3dbg_A          173 GQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRAS-----GQKPDDLLTA  247 (467)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTC-----CSSCCSHHHH
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhc-----CCCchHHHHH
Confidence            98764 23344444443332221   112    23333334455667778888888888877642     1345799999


Q ss_pred             HHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCcc
Q 011873          260 LLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKY  339 (475)
Q Consensus       260 ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~  339 (475)
                      +++..++++..++++++..++..+++||+|||+++++|++++|++||++|+||++|++++.+    ++.++++++++|||
T Consensus       248 ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~----~~~~~~~~l~~l~y  323 (467)
T 3dbg_A          248 LLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG----GRPVAFEDVRKLRH  323 (467)
T ss_dssp             HTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----TSCCCHHHHTTCHH
T ss_pred             HHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCCCCHHHHhhCHH
Confidence            99876555556999999999999999999999999999999999999999999999999985    36789999999999


Q ss_pred             HHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC---CCCCccccc
Q 011873          340 TWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND---IVPFSYVPF  416 (475)
Q Consensus       340 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~---~~~~~~~~F  416 (475)
                      |+|||+|+||++|+++.++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++   ..+..|+||
T Consensus       324 l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~F  403 (467)
T 3dbg_A          324 TGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPF  403 (467)
T ss_dssp             HHHHHHHHHHHSCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCCSS
T ss_pred             HHHHHHHHhhcCCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCccccCC
Confidence            99999999999999988899999999999999999999999999999999999999999999999642   346789999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc-ccccCccCCCCCCcceEe
Q 011873          417 GAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE-KMIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       417 g~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~v~~  471 (475)
                      |+|+|.|+|++||.+|++++++.|+++|++++.++.. ......++.|+ ++.++=
T Consensus       404 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~~  458 (467)
T 3dbg_A          404 SAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVRP  458 (467)
T ss_dssp             CSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEEE
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccch
Confidence            9999999999999999999999999999999976533 23345566666 355443


No 21 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=3.3e-70  Score=529.07  Aligned_cols=412  Identities=19%  Similarity=0.331  Sum_probs=333.6

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchhhhh-----hhcCCCCCCC--CchHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPRIIE-----NSFKSSPNIT--LQDEFN  127 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~-----~~~g~~~~~~--~~~~~~  127 (475)
                      +.++..+.+|+++||+ +|++++++.+.++|+||+++++++.++.....+.......     ..+|. +++.  +|+.|+
T Consensus        10 ~~~~~~~~~~~~kyG~-v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~w~   87 (456)
T 3mdm_A           10 RVLQDVFLDWAKKYGP-VVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQ-GLVSECNYERWH   87 (456)
T ss_dssp             CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTT-STTTCCCHHHHH
T ss_pred             chHHHHHHHHHHHhCC-eEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCC-CcccCCChHHHH
Confidence            5678889999999999 9999999999999999999999997543111111122221     22344 5544  899999


Q ss_pred             HHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh---cCCCcEEehhhHHHHHHHHHHHHhhcCCCCch---hHHHHHHH
Q 011873          128 SLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW---DGNDVVKVHDLSRKFIFALCSELMYNIHDTRT---ADELENLA  201 (475)
Q Consensus       128 ~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~---~~~~~~~~  201 (475)
                      ++|+++++.|+.++++++.+.+.+.+.++++.+.   .++.++|+.+++..+++++++.++||.+.+..   ..++...+
T Consensus        88 ~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~  167 (456)
T 3mdm_A           88 KQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAV  167 (456)
T ss_dssp             HHHHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHH
T ss_pred             HHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHH
Confidence            9999999999999999999999999988887533   24568999999999999999999999976532   12333333


Q ss_pred             HHHHhhh----hhcCcCCCCcc--cchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHH
Q 011873          202 HCIMTEF----FIIPVNIPGTK--FGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESE  275 (475)
Q Consensus       202 ~~~~~~~----~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~  275 (475)
                      ..+...+    ..+..++|...  .+...++.+.+.+++.++++++++....+. ....|+++.++...   +..+++++
T Consensus       168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~~ll~~~---~~~~~~~~  243 (456)
T 3mdm_A          168 KLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGE-EVPADILTQILKAE---EGAQDDEG  243 (456)
T ss_dssp             HHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCHHHHHHHHT---SSCSSSHH
T ss_pred             HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhhHHHHHHHhc---CCCCCHHH
Confidence            3332221    12222444321  122334556677778888888876655432 34579999999754   23478999


Q ss_pred             HHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC
Q 011873          276 IALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS  355 (475)
Q Consensus       276 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  355 (475)
                      +.+++..+++||+|||+++++|++++|+.||++|+||++|++++++   .++.++++++++||||+|||+|+||++||++
T Consensus       244 l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~  320 (456)
T 3mdm_A          244 LLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG---SKRYLDFEDLGRLQYLSQVLKESLRLYPPAW  320 (456)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT---TCSSCCHHHHHHCHHHHHHHHHHHHHCCSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcC---CCCCCCHHHHhcCHHHHHHHHHHHHhCCCcc
Confidence            9999999999999999999999999999999999999999999985   3567999999999999999999999999999


Q ss_pred             ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCCCCCccHHHHHHHHH
Q 011873          356 GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND-IVPFSYVPFGAGPHICPGKEFARLKLL  434 (475)
Q Consensus       356 ~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~  434 (475)
                      ++.|.+++|++++||.||||+.|.++.+++|+||++|+||++|+||||+++. .....|+|||+|+|.|||++||++|++
T Consensus       321 ~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~  400 (456)
T 3mdm_A          321 GTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVK  400 (456)
T ss_dssp             CEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSCCCSSSCCTTCCGGGSCTTHHHHHHHHH
T ss_pred             ccccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCCCCCCcccCCCCCCcCCCCHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999999864 345679999999999999999999999


Q ss_pred             HHHHHHHhcceEEEecCCc-ccccCccCCCCCCcceEeeeCC
Q 011873          435 VFFHNLVRKFRWEKIIPDE-KMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       435 ~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ++++.|+++|+|++.++.. ......++.|.+++.|++++|+
T Consensus       401 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          401 VVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             HHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECC
T ss_pred             HHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcC
Confidence            9999999999999975532 3344567889999999999985


No 22 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.3e-70  Score=532.54  Aligned_cols=425  Identities=18%  Similarity=0.264  Sum_probs=338.5

Q ss_pred             CCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh--
Q 011873           31 NLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR--  108 (475)
Q Consensus        31 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~--  108 (475)
                      +.||||+++|++||++.+..    ++++..+.+++++||+ +|++++++.+.++|+||+++++++.++.  |......  
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~----~~~~~~~~~~~~~yG~-v~~~~~~~~~~v~v~~~~~~~~il~~~~--f~~~~~~~~   75 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNT----DKPVQALMKIADELGE-IFKFEAPGRVTRYLSSQRLIKEACDESR--FDKNLSQAL   75 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCS----SCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHTCTTT--EEECCCHHH
T ss_pred             CCCCCCCCCCccccHHHHhc----ccchHHHHHHHHHhCC-eEEEecCCccEEEECCHHHHHHHHhhcC--cCcCchhHH
Confidence            46899999999999998753    5788889999999999 9999998889999999999999996532  3321111  


Q ss_pred             -hhhhhcCCCCCCC---CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc--CCCcEEehhhHHHHHHHHHH
Q 011873          109 -IIENSFKSSPNIT---LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD--GNDVVKVHDLSRKFIFALCS  182 (475)
Q Consensus       109 -~~~~~~g~~~~~~---~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~--~~~~vd~~~~~~~~~~~~~~  182 (475)
                       ......|. +++.   +|+.|+++|+++++.|+...++++.+.+.+.+.++++.+..  .++++|+.+++..+++++++
T Consensus        76 ~~~~~~~~~-~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~  154 (470)
T 2ij2_A           76 KFVRDFAGD-GLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG  154 (470)
T ss_dssp             HHHHHHHTT-SGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCC-ceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHH
Confidence             11222344 4443   78999999999999999999999999999999999986332  34689999999999999999


Q ss_pred             HHhhcCCCCch----hHHHHHHHHHHHhhhh---hcCc---CCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCC
Q 011873          183 ELMYNIHDTRT----ADELENLAHCIMTEFF---IIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPE  252 (475)
Q Consensus       183 ~~~fG~~~~~~----~~~~~~~~~~~~~~~~---~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (475)
                      .++||.+.+..    ...+...+........   ..+.   +++....++..++.+.+.+++.++++++++.   +  ..
T Consensus       155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~--~~  229 (470)
T 2ij2_A          155 LCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS---G--EQ  229 (470)
T ss_dssp             HHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C--CC
T ss_pred             HHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhc---c--cC
Confidence            99999875421    1233333332221111   1111   1111112334455667778888888877653   1  23


Q ss_pred             cccHHHHHHhhhcc-CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCCh
Q 011873          253 HKDILSLLLLEKNK-DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSF  331 (475)
Q Consensus       253 ~~d~~~~ll~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~  331 (475)
                      ..|+++.+++..+. ++..++++++..++..+++||+|||+++++|++++|++||++|+||++|++++++    +..+++
T Consensus       230 ~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~~~  305 (470)
T 2ij2_A          230 SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV----DPVPSY  305 (470)
T ss_dssp             CSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC----SSSCCH
T ss_pred             chhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC----CCCCCH
Confidence            46999999976532 2445999999999999999999999999999999999999999999999999975    245899


Q ss_pred             hhhccCccHHHHHHhhhcCCCCCCccccccccccccCc-eEeCCCCEEEEeccccccCCCCC-CCCCCCCCCCCCCCC--
Q 011873          332 DDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDG-YTIPKGFKLHWAVNATHKDPECF-PNPEKFDPSRYQGND--  407 (475)
Q Consensus       332 ~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g-~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~--  407 (475)
                      +++++||||+|||+|+||++||++.+.|.+.+|++++| |.||||+.|.++.+++||||++| +||++|+|||| ++.  
T Consensus       306 ~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~~~~  384 (470)
T 2ij2_A          306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-ENPSA  384 (470)
T ss_dssp             HHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SSGGG
T ss_pred             HHHhCCHHHHHHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CCCCc
Confidence            99999999999999999999999988899999999999 99999999999999999999999 99999999999 321  


Q ss_pred             CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCccc--ccCccCCCCCCcceEeeeCC
Q 011873          408 IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKM--IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       408 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ..+..|+|||+|+|.|+|++||.+|++++++.|+++|+|+ .+++...  ....+..|. ++.|++++|+
T Consensus       385 ~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p~-~~~v~~~~R~  452 (470)
T 2ij2_A          385 IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKPE-GFVVKAKSKK  452 (470)
T ss_dssp             SCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEET-TCEEEEEECC
T ss_pred             CCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecCC-CeEEEEEEcc
Confidence            2346789999999999999999999999999999999999 4333222  234466677 8999999985


No 23 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=8.7e-70  Score=530.75  Aligned_cols=431  Identities=19%  Similarity=0.248  Sum_probs=350.2

Q ss_pred             CCCCCCCCCCCCC-CcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCc-ccc
Q 011873           26 KPTTQNLPPGRKG-WPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHK-LFK  103 (475)
Q Consensus        26 ~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~-~~~  103 (475)
                      +.++.+.||||++ +|++||++.+.     .+++.++.+++++||+ +|++++++.++++|+||+++++++++++. .+.
T Consensus         8 ~~~~~~~PPgp~~~lPliG~~~~~~-----~~p~~~~~~l~~~yGp-v~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~   81 (491)
T 3v8d_A            8 RRRQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWK   81 (491)
T ss_dssp             CCCCTTSCCEEEEEESSTTTTGGGT-----CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGHHHHHSCCTTEESS
T ss_pred             hccCCCCCCCCCCCcceeccHHHHh-----cCHHHHHHHHHHHcCC-ceEEEECCEEEEEEcCHHHHHHHHhcCCccchH
Confidence            3456679999999 59999999997     8899999999999999 99999999999999999999999987652 344


Q ss_pred             cCchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc------CCCcEEehhhHHHH
Q 011873          104 PWLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD------GNDVVKVHDLSRKF  176 (475)
Q Consensus       104 ~~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~------~~~~vd~~~~~~~~  176 (475)
                      +........++|.+.+.. +|+.|+++|+.+.+.|++..++++.+.+.+++.+.++....      .+..+++.+++..+
T Consensus        82 ~~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~  161 (491)
T 3v8d_A           82 KFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV  161 (491)
T ss_dssp             HHHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHH
Confidence            444445567778756666 89999999999999999999999999999999998874321      34578999999999


Q ss_pred             HHHHHHHHhhcCCCCch---h---HHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccC
Q 011873          177 IFALCSELMYNIHDTRT---A---DELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKRE  250 (475)
Q Consensus       177 ~~~~~~~~~fG~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  250 (475)
                      ++++++..+||.+....   .   .+..+.+..+...+..+...+|....++..++++++.+.+.+.+++++        
T Consensus       162 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~--------  233 (491)
T 3v8d_A          162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR--------  233 (491)
T ss_dssp             HHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC--------
T ss_pred             HHHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence            99999999999975431   1   122233333333333344445655566666777776666665544332        


Q ss_pred             CCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCC-----
Q 011873          251 PEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGP-----  325 (475)
Q Consensus       251 ~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~-----  325 (475)
                      ....|+++.++....+. +.+++++++.+++.+++||++||+++++|++++|+.||++|++|++|++++++..+.     
T Consensus       234 ~~~~d~l~~l~~~~~~~-~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  312 (491)
T 3v8d_A          234 ESISELISLRMFLNDTL-STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLE  312 (491)
T ss_dssp             BSCCHHHHHHHHHHHHH-BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred             ccccHHHHHHHHHhhcc-CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccc
Confidence            23578999888755332 248999999999999999999999999999999999999999999999999875322     


Q ss_pred             --CCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc----CceEeCCCCEEEEeccccccCCCCCCCCCCCC
Q 011873          326 --DELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI----DGYTIPKGFKLHWAVNATHKDPECFPNPEKFD  399 (475)
Q Consensus       326 --~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~  399 (475)
                        ...++.+++++||||+|||+|+|||+| .+.++|.+++|+++    +||.||||+.|.++.+++|+||++|+||++|+
T Consensus       313 ~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  391 (491)
T 3v8d_A          313 GNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFK  391 (491)
T ss_dssp             SSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCC
T ss_pred             cccccCCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccC
Confidence              246899999999999999999999997 46778999999999    99999999999999999999999999999999


Q ss_pred             CCCCCCCCC------------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCcc---ccc----Ccc
Q 011873          400 PSRYQGNDI------------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK---MIR----NPN  460 (475)
Q Consensus       400 P~R~~~~~~------------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~---~~~----~~~  460 (475)
                      |+||++.+.            .+..|+|||+|+|.|||++||.+|++++++.|+++|||++.++...   ...    ..+
T Consensus       392 p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  471 (491)
T 3v8d_A          392 YDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGI  471 (491)
T ss_dssp             TTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEE
T ss_pred             cccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcc
Confidence            999997642            2467899999999999999999999999999999999999765321   111    126


Q ss_pred             CCCCCCcceEee
Q 011873          461 LMPEKGLPVRLY  472 (475)
Q Consensus       461 ~~p~~~~~v~~~  472 (475)
                      +.|..++.|+++
T Consensus       472 ~~p~~~i~v~~~  483 (491)
T 3v8d_A          472 LPPLNDIEFKYK  483 (491)
T ss_dssp             CCBSSCCEEEEE
T ss_pred             cCCCCCeEEEEE
Confidence            778989998876


No 24 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=4e-69  Score=526.63  Aligned_cols=431  Identities=19%  Similarity=0.240  Sum_probs=325.0

Q ss_pred             CCCCCCCCCCCC-CcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCC-ccccc
Q 011873           27 PTTQNLPPGRKG-WPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEH-KLFKP  104 (475)
Q Consensus        27 ~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~-~~~~~  104 (475)
                      ....+.||||++ +|++||++.+.     .+++.++.+++++||+ +|++++++.++++|+||+++++++++.. ..+.+
T Consensus         9 ~~~~~~pPgp~~~~P~iG~~~~~~-----~~~~~~~~~~~~kyG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~   82 (491)
T 3dax_A            9 RRQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKK   82 (491)
T ss_dssp             CCCTTCCCEEEEEESCTTTTGGGT-----CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGTHHHHSCCTTEESSH
T ss_pred             ccCCCCCCcCCCcccchhhHHHHh-----hCHHHHHHHHHHhcCC-eEEEEECCeEEEEEcChHHHHHHHcCCccCChHH
Confidence            344568999988 79999999886     6788999999999999 9999999999999999999999998765 23333


Q ss_pred             CchhhhhhhcCCCCCC-C-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc------CCCcEEehhhHHHH
Q 011873          105 WLPRIIENSFKSSPNI-T-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD------GNDVVKVHDLSRKF  176 (475)
Q Consensus       105 ~~~~~~~~~~g~~~~~-~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~------~~~~vd~~~~~~~~  176 (475)
                      .........+|. +++ . +|+.|+++|+.+.+.|+...++.+.+.+.+.+.+.+++...      .+..+++...+..+
T Consensus        83 ~~~~~~~~~~g~-~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~  161 (491)
T 3dax_A           83 FHFATSAKAFGH-RSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV  161 (491)
T ss_dssp             HHHHHHHHHHTC-CCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHH
T ss_pred             HHHHHHHHHcCC-CcccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHH
Confidence            322333445665 444 5 88889999999989999999999999888888877764321      22457888899999


Q ss_pred             HHHHHHHHhhcCCCCchh------HHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccC
Q 011873          177 IFALCSELMYNIHDTRTA------DELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKRE  250 (475)
Q Consensus       177 ~~~~~~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  250 (475)
                      ++++++.++||.+.....      .++.+.+..+...+..+...+|....++..++++.+.+.+   ++++.+   ..  
T Consensus       162 i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~~---~~--  233 (491)
T 3dax_A          162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENLQ---KR--  233 (491)
T ss_dssp             HHHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHHT---TC--
T ss_pred             HHHHhHHHHcCcccccccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHhh---cc--
Confidence            999999999998654321      1111111111111111112344322333333333222221   122111   11  


Q ss_pred             CCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCC----
Q 011873          251 PEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPD----  326 (475)
Q Consensus       251 ~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~----  326 (475)
                      ....|+++.+++...+.+ .++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++++..+..    
T Consensus       234 ~~~~d~l~~ll~~~~~~~-~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~  312 (491)
T 3dax_A          234 ESISELISLRMFLNDTLS-TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLE  312 (491)
T ss_dssp             BSCCHHHHHHHHHHHHHB-CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSS
T ss_pred             cchhHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccC
Confidence            235689998876543222 378999999999999999999999999999999999999999999999998642211    


Q ss_pred             ---CCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc----CceEeCCCCEEEEeccccccCCCCCCCCCCCC
Q 011873          327 ---ELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI----DGYTIPKGFKLHWAVNATHKDPECFPNPEKFD  399 (475)
Q Consensus       327 ---~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~  399 (475)
                         ..++++++++||||+|||+|+|||+|+ +.++|.+.+|+++    +||.||||+.|.++.+++|+||++|+||++|+
T Consensus       313 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~  391 (491)
T 3dax_A          313 GNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFK  391 (491)
T ss_dssp             SCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCC
T ss_pred             CCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcC
Confidence               146999999999999999999999974 7788999999999    78999999999999999999999999999999


Q ss_pred             CCCCCCCCC------------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc---ccc---cCc-c
Q 011873          400 PSRYQGNDI------------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMI---RNP-N  460 (475)
Q Consensus       400 P~R~~~~~~------------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~---~~~---~~~-~  460 (475)
                      ||||++++.            .+..|+|||+|+|.|||++||++|+++++|.||++|+|++.++..   ...   ... +
T Consensus       392 PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  471 (491)
T 3dax_A          392 YDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGI  471 (491)
T ss_dssp             TTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEE
T ss_pred             CccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccc
Confidence            999996431            246799999999999999999999999999999999999976531   111   122 4


Q ss_pred             CCCCCCcceEeeeC
Q 011873          461 LMPEKGLPVRLYPN  474 (475)
Q Consensus       461 ~~p~~~~~v~~~~r  474 (475)
                      ..|..++.|+++..
T Consensus       472 ~~p~~~~~~~~r~~  485 (491)
T 3dax_A          472 LPPLNDIEFKYKFK  485 (491)
T ss_dssp             CCBSSCCEEEEEEC
T ss_pred             cCCCCCceEEEEec
Confidence            67888888888754


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=1.1e-66  Score=509.95  Aligned_cols=429  Identities=19%  Similarity=0.232  Sum_probs=315.9

Q ss_pred             cCCCCCCCCCCCCC-CcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCc--c
Q 011873           25 PKPTTQNLPPGRKG-WPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHK--L  101 (475)
Q Consensus        25 ~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~--~  101 (475)
                      ...++.+.||||++ +|++||++.+.     .+++.++.+++++||+ +|++++++.+++|++||+++++++.++..  .
T Consensus        12 ~~~~~~~~PPgp~~~~P~iG~~~~~~-----~~~~~~~~~l~~kYG~-i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~   85 (498)
T 3b6h_A           12 RRTRRPGEPPLDLGSIPWLGYALDFG-----KDAASFLTRMKEKHGD-IFTILVGGRYVTVLLDPHSYDAVVWEPRTRLD   85 (498)
T ss_dssp             -CCCCTTCCCEECCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGHHHHHTCCTTTEE
T ss_pred             HhccCCCCCCCCCCCCcchhhHHHhc-----cCHHHHHHHHHHHcCC-eEEEEECCeeEEEEcCHHHHHHHHhCccccCC
Confidence            33456678999988 89999999986     5688999999999999 99999999999999999999999987653  3


Q ss_pred             cccCchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh----cCCCcEEehhhHHHH
Q 011873          102 FKPWLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW----DGNDVVKVHDLSRKF  176 (475)
Q Consensus       102 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~----~~~~~vd~~~~~~~~  176 (475)
                      +.+.........+|. +++. +++.|   |++..+.|+...++.+.+.+.+.+.+.+.+..    ..+..+++...+..+
T Consensus        86 ~~~~~~~~~~~~~g~-~~~~~~~~~~---rr~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~v  161 (498)
T 3b6h_A           86 FHAYAIFLMERIFDV-QLPHYSPSDE---KARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSF  161 (498)
T ss_dssp             CCHHHHHHHHHTSCC-CCTTCCHHHH---HHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHH
T ss_pred             chhhHHHHHHHHcCC-CccccCHHHH---HHHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHH
Confidence            333333344455665 4445 77766   45566788888999998888888877776432    233467888999999


Q ss_pred             HHHHHHHHhhcCCCCchhH----HHHHHHHHHHhhh----hhcCc----CCCCcccchhhhhhhHHHHHHHHHHHHHHHH
Q 011873          177 IFALCSELMYNIHDTRTAD----ELENLAHCIMTEF----FIIPV----NIPGTKFGRAVRAGREFHQRFRNMIKQRRLE  244 (475)
Q Consensus       177 ~~~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~~----~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  244 (475)
                      ++++++.++||........    +....+..+...+    ..+|.    +++....++..+++    +.+.+.+.+.+. 
T Consensus       162 i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-  236 (498)
T 3b6h_A          162 LLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVK----SRLWKLLSPARL-  236 (498)
T ss_dssp             HHHHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH----HHHHHHTCHHHH-
T ss_pred             HHHHHHHhhcCcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHH----HHHHHHHHHHHH-
Confidence            9999999999986432110    1111111111111    11221    11110011122222    222222221111 


Q ss_pred             HhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCC
Q 011873          245 IEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKG  324 (475)
Q Consensus       245 ~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~  324 (475)
                       +..  ....|+++.+++...+++ .++++++. +++.+++||++||+++++|++++|++||++|+||++|++++++..+
T Consensus       237 -~~~--~~~~d~l~~ll~~~~~~~-~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~  311 (498)
T 3b6h_A          237 -ARR--AHRSKWLESYLLHLEEMG-VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAE  311 (498)
T ss_dssp             -TTC--BSCCHHHHHHHHHHHHTT-CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC--
T ss_pred             -hcc--ccHHHHHHHHHHHHHhCC-CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccC
Confidence             111  235689999987654333 36777777 8888899999999999999999999999999999999999986321


Q ss_pred             C----CCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc-----CceEeCCCCEEEEeccc-cccCCCCCCC
Q 011873          325 P----DELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-----DGYTIPKGFKLHWAVNA-THKDPECFPN  394 (475)
Q Consensus       325 ~----~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-----~g~~ip~G~~v~~~~~~-~~~d~~~~~d  394 (475)
                      .    ...++.+++++||||+|||+|+||++|+ +.++|.+.+|+++     +||.||||+.|.++.++ +|+||++|+|
T Consensus       312 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~  390 (498)
T 3b6h_A          312 QPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTD  390 (498)
T ss_dssp             --------CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSS
T ss_pred             CCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCC
Confidence            1    1136899999999999999999999974 7788999999998     68999999999999999 9999999999


Q ss_pred             CCCCCCCCCCCCCC------------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc---ccc---
Q 011873          395 PEKFDPSRYQGNDI------------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMI---  456 (475)
Q Consensus       395 p~~F~P~R~~~~~~------------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~---~~~---  456 (475)
                      |++|+||||++.+.            .+..|+|||+|+|.|||++||.+|+++++|.|+++|||++.++..   ...   
T Consensus       391 p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  470 (498)
T 3b6h_A          391 PEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSR  470 (498)
T ss_dssp             TTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGG
T ss_pred             hhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccc
Confidence            99999999996531            245799999999999999999999999999999999999976431   111   


Q ss_pred             cC-ccCCCCCCcceEeeeC
Q 011873          457 RN-PNLMPEKGLPVRLYPN  474 (475)
Q Consensus       457 ~~-~~~~p~~~~~v~~~~r  474 (475)
                      .. .+..|..+++|++++|
T Consensus       471 ~~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          471 YGFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             TBSSBCCBSSCCEEEEEEC
T ss_pred             cccccCCCCCCccEEEEec
Confidence            12 2456788899999887


No 26 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=6.8e-67  Score=498.83  Aligned_cols=398  Identities=17%  Similarity=0.245  Sum_probs=324.3

Q ss_pred             CcccchhhhhhhccccCChhHHHHHHHHhhc-CcceeeccCCCcEEEecCcccchhhhccCCccccc--Cchh-hhhhhc
Q 011873           39 WPFIGETLEYHALSKKGCIEKFMSQRMQKYS-SKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKP--WLPR-IIENSF  114 (475)
Q Consensus        39 ~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~--~~~~-~~~~~~  114 (475)
                      .|++||+..+.     .+++.++.+++++|| + ||++.++|.+.+++++++.++.++. .. .|..  .... ....++
T Consensus         8 ~P~lG~~~~~~-----~~p~~~~~~l~~~yg~p-v~~~~~~g~~~v~v~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~~   79 (417)
T 1izo_A            8 DKSLDNSLTLL-----KEGYLFIKNRTERYNSD-LFQARLLGKNFICMTGAEAAKVFYD-TD-RFQRQNALPKRVQKSLF   79 (417)
T ss_dssp             CCCTTHHHHHH-----HHGGGHHHHHHHHTTSS-EEEEEETTEEEEEECSHHHHHHHTC-TT-TEECTTCSCHHHHTTTT
T ss_pred             CCccchHHHHh-----hCcHHHHHHHHHHhCCC-eEEeecCCccEEEECCHHHHHHHhc-cc-ccccccccccchhhhhc
Confidence            38999999987     678899999999998 6 9999988889999999999986654 33 2332  2222 234566


Q ss_pred             CCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCCch
Q 011873          115 KSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYNIHDTRT  193 (475)
Q Consensus       115 g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~  193 (475)
                      |..+++. +|+.|+++|+++++.|+++.++.+.+.+.+.+.++++. |..++++|+.+++..+++++++.+ ||.+.++.
T Consensus        80 g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~  157 (417)
T 1izo_A           80 GVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTR-WEKADEVVLFEEAKEILCRVACYW-AGVPLKET  157 (417)
T ss_dssp             CTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHH-HTTSSEEEHHHHHHHHHHHHHHHH-HTCCCCTT
T ss_pred             cccceeecCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHH-HhcCCCeeHHHHHHHHHHHHHHHH-cCCCCCch
Confidence            7556777 99999999999999999999999999999999999985 666789999999999999999998 69876432


Q ss_pred             -hHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCC
Q 011873          194 -ADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLT  272 (475)
Q Consensus       194 -~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~  272 (475)
                       ..++.+.+..+...+   ...  .+...+..++.+.+.+++.++|++++++...   ...+|+++.++...+.++..++
T Consensus       158 ~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~~~d~l~~ll~~~~~~g~~l~  229 (417)
T 1izo_A          158 EVKERADDFIDMVDAF---GAV--GPRHWKGRRARPRAEEWIEVMIEDARAGLLK---TTSGTALHEMAFHTQEDGSQLD  229 (417)
T ss_dssp             THHHHHHHHHHHHHHT---TCC--SHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC---CCTTSHHHHHHHCBCTTSCBCC
T ss_pred             HHHHHHHHHHHHHhhc---ccC--CccchhHHHHHHHHHHHHHHHHHHHHhhccC---CCcCCHHHHHHHhccccCCCCC
Confidence             233333333332221   111  1123445567778889999999888753211   2356899999976544555588


Q ss_pred             HHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCC
Q 011873          273 ESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEP  352 (475)
Q Consensus       273 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p  352 (475)
                      ++++..++..++ ||++||+++++|++++|++||++|+||++|                    ++|||+|||+|+||++|
T Consensus       230 ~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--------------------~~~~l~a~i~E~lRl~p  288 (417)
T 1izo_A          230 SRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG--------------------NSREREMFVQEVRRYYP  288 (417)
T ss_dssp             HHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--------------------CHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--------------------CCHHHHHHHHHHhhcCC
Confidence            888877776655 999999999999999999999999999986                    35899999999999999


Q ss_pred             CCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC----CCCCccHHH
Q 011873          353 PNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAG----PHICPGKEF  428 (475)
Q Consensus       353 ~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G----~r~C~G~~~  428 (475)
                      |++.+.|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+..+..|+|||+|    +|.|+|++|
T Consensus       289 ~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G~r~~~r~C~G~~l  368 (417)
T 1izo_A          289 FGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGI  368 (417)
T ss_dssp             CCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTTHHH
T ss_pred             cccccceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCCCCcceeCCCCCCCCCCCcCCCHHH
Confidence            9998899999999999999999999999999999999999999999999999865556789999999    599999999


Q ss_pred             HHHHHHHHHHHHHhcceEEEecCCccccc-CccCCCCCCcceEeeeCC
Q 011873          429 ARLKLLVFFHNLVRKFRWEKIIPDEKMIR-NPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       429 a~~~~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~p~~~~~v~~~~r~  475 (475)
                      |.+|++++++.|+++|++++.+++..... ..+..|++++.|++++|+
T Consensus       369 A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          369 TIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             HHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCC
Confidence            99999999999999999998755443333 346789999999999985


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=3.7e-67  Score=510.60  Aligned_cols=422  Identities=17%  Similarity=0.222  Sum_probs=307.4

Q ss_pred             CCCCCCCCCCCC-CcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCc-cccc
Q 011873           27 PTTQNLPPGRKG-WPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHK-LFKP  104 (475)
Q Consensus        27 ~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~-~~~~  104 (475)
                      .++.+.||||++ +|++||++.+.     .+++.++.+++++||+ +|++++++.++++|+||+++++++.++.. .+.+
T Consensus        14 ~~~~~~pPgp~~~~P~iG~~~~~~-----~~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~   87 (475)
T 3b98_A           14 TRRRNEPPLDKGMIPWLGHALEFG-----KDAAKFLTRMKEKHGD-IFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTS   87 (475)
T ss_dssp             CCCTTCCCEECCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCTTTHHHHHTCTTTEESHH
T ss_pred             ccCCCCCCCCCCCcchHHhHHHHh-----hCHHHHHHHHHHHhCC-eEEEEECCceEEEEeCHHHHHHHHcCcccCCchH
Confidence            445678999998 89999999986     6789999999999999 99999999999999999999999987652 2222


Q ss_pred             CchhhhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcC-----CCcEEehhhHHHHHH
Q 011873          105 WLPRIIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDG-----NDVVKVHDLSRKFIF  178 (475)
Q Consensus       105 ~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~-----~~~vd~~~~~~~~~~  178 (475)
                      .........+|. +++. +++.|   |+++.+.|+...++.+.+.+.+.+.+.+++....     ...+++...+..+++
T Consensus        88 ~~~~~~~~~~g~-~~~~~~~~~~---R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (475)
T 3b98_A           88 YAQVLMKRIFNM-ILPSHNPESE---KKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLF  163 (475)
T ss_dssp             HHHHHHHHTTCC-CCTTCCHHHH---HHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCC-CCCCCChHHH---HHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHH
Confidence            222334455665 4555 77655   5777789999999999999999998888754322     125677788888888


Q ss_pred             HHHHHHhhcCCCCch--hHHHHHHHHHHHhhhhhcC-cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCccc
Q 011873          179 ALCSELMYNIHDTRT--ADELENLAHCIMTEFFIIP-VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKD  255 (475)
Q Consensus       179 ~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  255 (475)
                      ++++...||.+....  ..++.+.+..+...+..+. .+++.    ...+...+..+.+.+.+.+.+   .+ ......|
T Consensus       164 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~d  235 (475)
T 3b98_A          164 KTGYLTVFGAENNNSAALTQIYEEFRRFDKLLPKLARTTVNK----EEKQIASAAREKLWKWLTPSG---LD-RKPREQS  235 (475)
T ss_dssp             HHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCCCH----HHHHHHHHHHHHHHHHHSCTT---SC-CCCCTTS
T ss_pred             HHhhhheeCCccccchhcHHHHHHHHHHHhhhHHHHHHhcCh----hhhHHHHHHHHHHHHHHHHHH---hh-ccccccH
Confidence            888888899653221  1222222222211111111 11111    111111222222222221111   11 1134578


Q ss_pred             HHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhc
Q 011873          256 ILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLK  335 (475)
Q Consensus       256 ~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~  335 (475)
                      +++.+++...+++ .++++++. ++..+++||+|||+++++|++++|+.||++|+||++|++.     + +..+++++++
T Consensus       236 ~l~~ll~~~~~~~-~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~-----~-~~~~~~~~~~  307 (475)
T 3b98_A          236 WLGSYVKQLQDEG-IDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG-----G-KHLRLEERQK  307 (475)
T ss_dssp             HHHHHHHHHHHTT-CCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------------
T ss_pred             HHHHHHHHHHHcC-CCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc-----C-CCCCCHHHHh
Confidence            9999987644333 47788888 8999999999999999999999999999999999999982     1 2346899999


Q ss_pred             cCccHHHHHHhhhcCCCCCCcccccccccccc-----CceEeCCCCEEEEeccc-cccCCCCCCCCCCCCCCCCCCCCC-
Q 011873          336 RMKYTWNVISEVLRMEPPNSGTFREALTEVTI-----DGYTIPKGFKLHWAVNA-THKDPECFPNPEKFDPSRYQGNDI-  408 (475)
Q Consensus       336 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-----~g~~ip~G~~v~~~~~~-~~~d~~~~~dp~~F~P~R~~~~~~-  408 (475)
                      +||||+|||+|+|||+|+ +.++|.+.+|+++     +||.||||+.|.++.++ +||||++|+||++|+||||++.+. 
T Consensus       308 ~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~  386 (475)
T 3b98_A          308 NTPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRT  386 (475)
T ss_dssp             CCHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSC
T ss_pred             cCHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCC
Confidence            999999999999999986 7788999999999     88999999999999999 999999999999999999996531 


Q ss_pred             -----------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecCCc---ccc---cC-ccCCCCCCcceE
Q 011873          409 -----------VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMI---RN-PNLMPEKGLPVR  470 (475)
Q Consensus       409 -----------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~---~~~---~~-~~~~p~~~~~v~  470 (475)
                                 .+..|+|||+|+|.|||++||.+|++++++.|+++|+|++.++..   ...   .. .+..|..++.|+
T Consensus       387 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  466 (475)
T 3b98_A          387 EKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIR  466 (475)
T ss_dssp             BCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEE
T ss_pred             ccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEE
Confidence                       246799999999999999999999999999999999999976531   111   12 256688899999


Q ss_pred             eeeCC
Q 011873          471 LYPNN  475 (475)
Q Consensus       471 ~~~r~  475 (475)
                      +++|+
T Consensus       467 ~~~R~  471 (475)
T 3b98_A          467 YRIRF  471 (475)
T ss_dssp             EEEC-
T ss_pred             EEecc
Confidence            99985


No 28 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=2e-66  Score=496.57  Aligned_cols=391  Identities=17%  Similarity=0.229  Sum_probs=308.4

Q ss_pred             CCCCCCCCCCCcccchhh-hhhhccccCChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCc
Q 011873           29 TQNLPPGRKGWPFIGETL-EYHALSKKGCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWL  106 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  106 (475)
                      .++.||||+++|++|++. .+.     .+++.++.++ ++||+ +|++++ ++.++++|+||+++++++.++  .|.+..
T Consensus        24 ~~~~~PGP~~~p~lG~~~~~~~-----~~p~~~~~~l-~~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~   94 (436)
T 2cd8_A           24 TQQGTTASPPVLDLGALGQDFA-----ADPYPTYARL-RAEGP-AHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDW   94 (436)
T ss_dssp             ----------CCBHHHHHHHHH-----HCCHHHHHHH-HTTCS-EEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCG
T ss_pred             hccCCCCCCccccCCCCCcccc-----cChHHHHHHH-HHhCC-eeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccc
Confidence            456799999999999986 443     6788999999 99999 999998 778899999999999999876  344332


Q ss_pred             hhhhh------hhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh-cCCCcEEehhhH-HHHH
Q 011873          107 PRIIE------NSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW-DGNDVVKVHDLS-RKFI  177 (475)
Q Consensus       107 ~~~~~------~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~vd~~~~~-~~~~  177 (475)
                      ...+.      ...+ .++++ +|+.|+++|+++++.|+...++++.+.+.+.+.++++.+. ..++++|+.+++ ..++
T Consensus        95 ~~~~~~~~~~~~~~~-~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~  173 (436)
T 2cd8_A           95 RNSTTPLTEAEAALN-HNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLP  173 (436)
T ss_dssp             GGCSSCCCTTGGGTC-CSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHH
T ss_pred             ccccccccccccccc-ccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHH
Confidence            11111      2223 36777 9999999999999999999999999999999999998644 236789999876 5799


Q ss_pred             HHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHH
Q 011873          178 FALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDIL  257 (475)
Q Consensus       178 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~  257 (475)
                      +++++. +||.+..+ ..++......+.    ...   +   .++..++.+++.+++.++|+++++       ...+|++
T Consensus       174 ~~vi~~-~~G~~~~~-~~~~~~~~~~~~----~~~---~---~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l  234 (436)
T 2cd8_A          174 ITVISE-LLGVPEPD-RAAFRVWTDAFV----FPD---D---PAQAQTAMAEMSGYLSRLIDSKRG-------QDGEDLL  234 (436)
T ss_dssp             HHHHHH-HHTCCGGG-HHHHHHHHHHHH----SCS---S---TTHHHHHHHHHHHHHHHHHHHHTT-------SCCCSHH
T ss_pred             HHHHHH-HhCCCHHH-HHHHHHHHHHHh----ccC---C---HHHHHHHHHHHHHHHHHHHHHHhc-------CCCCCHH
Confidence            999998 69986542 233333333222    111   1   144566777888888888888764       2346899


Q ss_pred             HHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 011873          258 SLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRM  337 (475)
Q Consensus       258 ~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~l  337 (475)
                      +.+++...+++..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                     
T Consensus       235 ~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~---------------------  293 (436)
T 2cd8_A          235 SALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM---------------------  293 (436)
T ss_dssp             HHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------
T ss_pred             HHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh---------------------
Confidence            99998654434569999999999999999999999999999999999999999999874                     


Q ss_pred             ccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 011873          338 KYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPF  416 (475)
Q Consensus       338 p~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~F  416 (475)
                      .||+|||+|+||++||++ .++|.+.+|++|+||.||||+.|.++.+++|+||++|+||++|+||||      +..|+||
T Consensus       294 ~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~~pF  367 (436)
T 2cd8_A          294 TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRD------TAGHLAF  367 (436)
T ss_dssp             GGHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSC------CTTCCTT
T ss_pred             hhHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCC------CCCCCCC
Confidence            379999999999999999 789999999999999999999999999999999999999999999995      2479999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecCCcc--cccCccCCCCCCcceEeeeCC
Q 011873          417 GAGPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       417 g~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |+|+|.|+|++||++|++++++.|+++| ++++..+...  ........+..+++|++++|+
T Consensus       368 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  429 (436)
T 2cd8_A          368 GHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGR  429 (436)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC-----
T ss_pred             CCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCc
Confidence            9999999999999999999999999999 6998643222  233446678889999999985


No 29 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=1.2e-65  Score=489.83  Aligned_cols=399  Identities=16%  Similarity=0.231  Sum_probs=320.6

Q ss_pred             CCCCCCCcccchhhhhhhccccCChhHHHHHHHHhh-cCcceeeccCCCcEEEecCcccchhhhccCCcccccC--chh-
Q 011873           33 PPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKY-SSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW--LPR-  108 (475)
Q Consensus        33 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~y-G~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~--~~~-  108 (475)
                      ||||   |++||++.+.     .+++.++.+++++| |+ ||++.++|.+.+++++++.++ ++.+.. .|...  ... 
T Consensus         4 pPg~---P~iG~~~~~~-----~~p~~~~~~l~~~y~gp-v~~~~~~g~~~~vv~~~~~~~-~l~~~~-~f~~~~~~~~~   72 (415)
T 3awm_A            4 TPHT---KGPDETLSLL-----ADPYRFISRQCQRLGAN-AFESRFLLKKTNCLKGAKAAE-IFYDTT-RFEREGAMPVA   72 (415)
T ss_dssp             --------CCCCHHHHH-----HSTTTHHHHHHHHHTSS-EEEEEETTEEEEEEESHHHHH-HHTCTT-TEECTTCSCHH
T ss_pred             CCCC---CccchHHHHH-----hChHHHHHHHHHHhCCC-eEEEecCCCcEEEEeCHHHHH-HHhccc-ccccccccchh
Confidence            6666   8999999987     67899999999999 67 999998888899999999987 665553 34321  222 


Q ss_pred             hhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhc
Q 011873          109 IIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYN  187 (475)
Q Consensus       109 ~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG  187 (475)
                      ....++|..+++. +|+.|+++|+++++.|+++.++.+.+.+.+.+.+++++ +..++++|+.+++..+++++++.+ ||
T Consensus        73 ~~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~-~~~~~~vdl~~~~~~~~~~vi~~~-~G  150 (415)
T 3awm_A           73 IQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPG-WTRKGEIVFYDELHEPLTRAVCAW-AG  150 (415)
T ss_dssp             HHTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-HHHHSEEEHHHHHHHHHHHHHHHH-HT
T ss_pred             hhhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh-hccCCcEeHHHHHHHHHHHHHHHH-cC
Confidence            2334566556777 99999999999999999999999999999999999986 544568999999999999999998 89


Q ss_pred             CCCCch-hHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhcc
Q 011873          188 IHDTRT-ADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNK  266 (475)
Q Consensus       188 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~  266 (475)
                      .+.+.. ..++.+.+..+...   +...  .+...+..++.+.+.+++.++|++++++..   ....+|+++.++...+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d~l~~ll~~~~~  222 (415)
T 3awm_A          151 VPLPDDEAGNRAGELRALFDA---AGSA--SPRHLWSRLARRRVDAWAKRIIEGIRAGSI---GSGSGTAAYAIAWHRDR  222 (415)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHS---TTCS--SHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---CCCTTSHHHHHHHCBCT
T ss_pred             CCCCcchHHHHHHHHHHHHHH---hccc--CchHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCCCCHHHHHHhhhhc
Confidence            876542 12222222222221   1111  122345567778888999999998876421   12456899999976544


Q ss_pred             CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHh
Q 011873          267 DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISE  346 (475)
Q Consensus       267 ~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E  346 (475)
                      ++..++++++..++..++ ||++||+++++|++++|++||++|+||++|                     +|||+|||+|
T Consensus       223 ~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------------------~~~l~a~i~E  280 (415)
T 3awm_A          223 HDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------------------PDYAELFVQE  280 (415)
T ss_dssp             TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------------------TTHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------------------HHHHHHHHHH
Confidence            555688888887777655 999999999999999999999999999985                     4899999999


Q ss_pred             hhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC----CCC
Q 011873          347 VLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAG----PHI  422 (475)
Q Consensus       347 ~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G----~r~  422 (475)
                      +||++||++.++|.+++|++++|+.||||+.|.++.+++|+||++|+||++|+||||++.+..+..|+|||+|    +|.
T Consensus       281 ~lRl~p~~~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G~r~~~r~  360 (415)
T 3awm_A          281 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR  360 (415)
T ss_dssp             HHHHSCCSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCCCSSSCCTTCCSCTTTSCC
T ss_pred             HhhcCCCccccceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCCCCCCccCCCCCCCCCCCc
Confidence            9999999998899999999999999999999999999999999999999999999999765556789999999    599


Q ss_pred             CccHHHHHHHHHHHHHHHHhcceEEEecCCccccc-CccCCCCCCcceEeeeC
Q 011873          423 CPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIR-NPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       423 C~G~~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~p~~~~~v~~~~r  474 (475)
                      |+|++||.+|++++++.|+++|++++.+++..... .....|++++.|++++.
T Consensus       361 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          361 CPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEES
T ss_pred             CchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeC
Confidence            99999999999999999999999998655444333 34667999999999864


No 30 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=7.5e-66  Score=486.50  Aligned_cols=376  Identities=16%  Similarity=0.212  Sum_probs=303.6

Q ss_pred             CCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC--chhhhhh
Q 011873           35 GRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW--LPRIIEN  112 (475)
Q Consensus        35 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~--~~~~~~~  112 (475)
                      .+..+|++||+..+.     .+++.++.+++++||+ +|+ ++++.++++++||+.+++++.++  .|.+.  .......
T Consensus         3 ~~~~~p~iGnl~~~~-----~~p~~~~~~l~~~yGp-v~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~   73 (389)
T 1n97_A            3 RLSLREAWPYLKDLQ-----QDPLAVLLAWGRAHPR-LFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSR   73 (389)
T ss_dssp             ECCHHHHHHHHHHHH-----HCHHHHHHHHHHHCSE-EEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHH
T ss_pred             ccccccccccHHHHh-----hChHHHHHHHHHHcCC-eeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHH
Confidence            345689999999886     5788999999999999 999 88888999999999999999876  45433  2223344


Q ss_pred             hcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCC
Q 011873          113 SFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYNIHDT  191 (475)
Q Consensus       113 ~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~  191 (475)
                      ++|. ++++ +|+.|+++|+++++.|++++++++.+.+.+.+.+++++ +. ++++|+.+++..+++++++.++||.+.+
T Consensus        74 ~~g~-~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~-~~~~dl~~~~~~~~~~vi~~~~fG~~~~  150 (389)
T 1n97_A           74 LTGR-GLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGE-WR-GEERDLDHEMLALSLRLLGRALFGKPLS  150 (389)
T ss_dssp             HHCS-STTTCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHT-CC-SCCEEHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             HhCC-ccccCCcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHH-cc-CCcCcHHHHHHHHHHHHHHHHHcCCcch
Confidence            5564 7777 99999999999999999999999999999999999986 55 6789999999999999999999999876


Q ss_pred             chhHHHHHHHHHHHhhhh--hcC--cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccC
Q 011873          192 RTADELENLAHCIMTEFF--IIP--VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKD  267 (475)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~--~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~  267 (475)
                      +   ++.+.+..+.....  .+.  .++|....++..++.+.+.+++.+.++++                  ++      
T Consensus       151 ~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r------------------ll------  203 (389)
T 1n97_A          151 P---SLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHP------------------PL------  203 (389)
T ss_dssp             H---HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTST------------------TG------
T ss_pred             H---HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH------------------hc------
Confidence            3   44444443332221  011  22232111222222222322222222211                  22      


Q ss_pred             CCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhh
Q 011873          268 GEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEV  347 (475)
Q Consensus       268 ~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~  347 (475)
                       ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++.+.                     |||+|+
T Consensus       204 -~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~---------------------a~i~E~  261 (389)
T 1n97_A          204 -SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------------------AAFQEA  261 (389)
T ss_dssp             -GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH---------------------HHHHHH
T ss_pred             -ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---------------------HHHHHH
Confidence             1289999999999999999999999999999999999999999999999874                     899999


Q ss_pred             hcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCCCCCccH
Q 011873          348 LRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGN-DIVPFSYVPFGAGPHICPGK  426 (475)
Q Consensus       348 lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~-~~~~~~~~~Fg~G~r~C~G~  426 (475)
                      ||++||++..+|.+.+|++++||.||||+.|.++.+++|+|  +|+||++|+||||+++ ...+..|+|||+|+|.|+|+
T Consensus       262 lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~~~~~~~~~~FG~G~r~C~G~  339 (389)
T 1n97_A          262 LRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGR  339 (389)
T ss_dssp             HHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCCCCBTTBCTTCCSTTCCTTH
T ss_pred             HhcCCCccccceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCCCCCCCCccCCCCCCCCCchH
Confidence            99999999889999999999999999999999999999999  9999999999999864 23456899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcceEEEecCCcccccCccCCCCCCcceEeeeC
Q 011873          427 EFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       427 ~~a~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  474 (475)
                      ++|.+|++++++.|+++|++++.++... ....+..|.++++|++++|
T Consensus       340 ~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          340 DFALLEGPIVLRAFFRRFRLDPLPFPRV-LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCCCCE-EESSSEEETTCCEECCBC-
T ss_pred             HHHHHHHHHHHHHHHHhceEEeCCCCcc-cceEEeeeCCCceEEEeec
Confidence            9999999999999999999998754433 4456778888999999987


No 31 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=2.4e-63  Score=472.34  Aligned_cols=386  Identities=16%  Similarity=0.155  Sum_probs=303.2

Q ss_pred             CCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccC-CCcEEEecCcccchhhhccCCc-cccc--Cch
Q 011873           32 LPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYL-GADMVFLCSAEGNKLLFSNEHK-LFKP--WLP  107 (475)
Q Consensus        32 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~-~~~~vvv~~p~~~~~i~~~~~~-~~~~--~~~  107 (475)
                      +||||+++|++|++.        .+++..+.++. +||+ +|++.++ |.+.++|++++.+++++.++.. .+..  ...
T Consensus         2 ~pPGp~~~P~~g~~~--------~~p~~~~~~l~-~~Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~   71 (404)
T 1jfb_A            2 MASGAPSFPFSRASG--------PEPPAEFAKLR-ATNP-VSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFP   71 (404)
T ss_dssp             ----CCBSSCCCSST--------TSCCTHHHHHH-HHCS-EEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCC
T ss_pred             CCCCCCCCCCCCCcC--------CCccHHHHHHH-HhCC-eeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCc
Confidence            599999999999865        36677788875 6999 9998874 6777889999999999987631 1111  111


Q ss_pred             h----hhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcC---CCcEEehhhHHHHHHH
Q 011873          108 R----IIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDG---NDVVKVHDLSRKFIFA  179 (475)
Q Consensus       108 ~----~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~---~~~vd~~~~~~~~~~~  179 (475)
                      .    ......|..++++ +|+.|+++|+++++.|+..+++++.+.+.+.+.++++++...   ++++|+.+.+...+.+
T Consensus        72 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~  151 (404)
T 1jfb_A           72 ELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPS  151 (404)
T ss_dssp             CCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHH
T ss_pred             cccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHH
Confidence            1    0112334446777 999999999999999999999999999999999998864332   3689999999999999


Q ss_pred             HHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHH
Q 011873          180 LCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSL  259 (475)
Q Consensus       180 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~  259 (475)
                      +++..+||.+..+  .+......   ..+..   +.+  ..++..++.+.+.+++.++++++++       ...+|+++.
T Consensus       152 ~i~~~~~G~~~~~--~~~~~~~~---~~~~~---~~~--~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~  214 (404)
T 1jfb_A          152 YIIYTLLGVPFND--LEYLTQQN---AIRTN---GSS--TAREASAANQELLDYLAILVEQRLV-------EPKDDIISK  214 (404)
T ss_dssp             HHHHHHHTCCGGG--HHHHHHHH---HHHHC---TTS--CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHH
T ss_pred             HHHHHHcCCCHHH--HHHHHHHH---HHHhc---cCc--chHHHHHHHHHHHHHHHHHHHHHHh-------CCCCcHHHH
Confidence            9999999986643  22222211   11111   112  2345556677888899999988765       235799999


Q ss_pred             HHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCcc
Q 011873          260 LLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKY  339 (475)
Q Consensus       260 ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~  339 (475)
                      +++... ++..++++++..++..+++||+|||+++++|++++|++||++|+||+++                     .+|
T Consensus       215 ll~~~~-~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~---------------------~~y  272 (404)
T 1jfb_A          215 LCTEQV-KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN---------------------PSL  272 (404)
T ss_dssp             HHHHTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC---------------------GGG
T ss_pred             HHHhhc-cCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC---------------------hHh
Confidence            996542 3345899999999999999999999999999999999999999999872                     279


Q ss_pred             HHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCC
Q 011873          340 TWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGA  418 (475)
Q Consensus       340 l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~  418 (475)
                      ++|||+|+||++||++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.    ..|+|||+
T Consensus       273 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~----~~~~~Fg~  348 (404)
T 1jfb_A          273 APQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP----QDPLGFGF  348 (404)
T ss_dssp             HHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS----SCCCTTCC
T ss_pred             HHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC----CCCCCCCC
Confidence            9999999999999999 789999999999999999999999999999999999999999999999864    35999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecCCccc--ccCccCCCCCCcceE
Q 011873          419 GPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIPDEKM--IRNPNLMPEKGLPVR  470 (475)
Q Consensus       419 G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~~--~~~~~~~p~~~~~v~  470 (475)
                      |+|.|+|++||++|++++++.|+++| ++++..+....  ......+....++|+
T Consensus       349 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~  403 (404)
T 1jfb_A          349 GDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVI  403 (404)
T ss_dssp             GGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEE
T ss_pred             CCccCCCHHHHHHHHHHHHHHHHHHCCCceecCCcccccccccccccCcccceee
Confidence            99999999999999999999999999 79986543322  223344455455554


No 32 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=4.6e-64  Score=476.43  Aligned_cols=381  Identities=18%  Similarity=0.200  Sum_probs=308.0

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeec----c-CC-CcEEEecCcccchhhh-ccCCc
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTS----Y-LG-ADMVFLCSAEGNKLLF-SNEHK  100 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~----~-~~-~~~vvv~~p~~~~~i~-~~~~~  100 (475)
                      ...++||||+++|+.     +.     .+++.++.++ ++||+ +|+++    + ++ .++++++||+.+++++ .++. 
T Consensus         7 ~~~~lppgp~~~p~~-----~~-----~~p~~~~~~l-~~yGp-v~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~-   73 (406)
T 1ued_A            7 QVAPLLREPANFQLR-----TN-----CDPHEDNFGL-RAHGP-LVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH-   73 (406)
T ss_dssp             SCCCEEECCTTTTCE-----ET-----TEECHHHHHH-HTTCS-EEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS-
T ss_pred             CCCCCcccCcccCCC-----CC-----CCcHHHHHHH-HHhCC-eeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc-
Confidence            346689999999886     33     6788899999 99999 99999    6 78 8999999999999999 6553 


Q ss_pred             ccccCch---h--hhh-hhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH
Q 011873          101 LFKPWLP---R--IIE-NSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS  173 (475)
Q Consensus       101 ~~~~~~~---~--~~~-~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~  173 (475)
                       +.+...   .  .+. ......+++. +|+.|+++|+++++.|+...++++.+.+.+.+.++++.+...++++|+.+++
T Consensus        74 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~  152 (406)
T 1ued_A           74 -FTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLF  152 (406)
T ss_dssp             -EECCCCC---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHT
T ss_pred             -ccccccccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHH
Confidence             222111   1  111 1112236667 9999999999999999999999999999999999998644446789999887


Q ss_pred             HH-HHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCC
Q 011873          174 RK-FIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPE  252 (475)
Q Consensus       174 ~~-~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (475)
                      .. +++++++. +||.+..+ .+++...+..    +...  .   ...++..++.+.+.+++.++++++++       ..
T Consensus       153 ~~~~~~~vi~~-~~G~~~~~-~~~~~~~~~~----~~~~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~  214 (406)
T 1ued_A          153 ADPVGAHALCE-LLGIPRDD-QREFVRRIRR----NADL--S---RGLKARAADSAAFNRYLDNLLARQRA-------DP  214 (406)
T ss_dssp             HHHHHHHHHHH-HHTCCHHH-HHHHHHHHHH----CC--------CCHHHHHHHHHHHHHHHHHHHHHHHH-------SC
T ss_pred             HHHhHHHHHHH-HcCCCHHH-HHHHHHHHHH----HHhc--c---CCHHHHHHHHHHHHHHHHHHHHHHHh-------CC
Confidence            75 99999995 69986431 2233332222    2111  1   11245566777888899999988775       23


Q ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChh
Q 011873          253 HKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFD  332 (475)
Q Consensus       253 ~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~  332 (475)
                      ..|+++.+++..   +..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+.               
T Consensus       215 ~~d~l~~ll~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------  276 (406)
T 1ued_A          215 DDGLLGMIVRDH---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE---------------  276 (406)
T ss_dssp             CSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH---------------
T ss_pred             CCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH---------------
Confidence            478999999764   23489999999999999999999999999999999999999999999764               


Q ss_pred             hhccCccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 011873          333 DLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPF  411 (475)
Q Consensus       333 ~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~  411 (475)
                            |++|||+|+||++||++ +++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||      +.
T Consensus       277 ------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~  344 (406)
T 1ued_A          277 ------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA------AV  344 (406)
T ss_dssp             ------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------CC
T ss_pred             ------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC------CC
Confidence                  58899999999999998 489999999999999999999999999999999999999999999998      35


Q ss_pred             cccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecCCc--ccccCccCCCCCCcceEe
Q 011873          412 SYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIPDE--KMIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       412 ~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~~~--~~~~~~~~~p~~~~~v~~  471 (475)
                      .|+|||+|+|.|+|++||++|++++++.|+++| ++++.+++.  ......+.++ ++++|++
T Consensus       345 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          345 SDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            689999999999999999999999999999999 799975433  3334557788 8898874


No 33 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=1.2e-63  Score=474.76  Aligned_cols=393  Identities=18%  Similarity=0.250  Sum_probs=307.8

Q ss_pred             HhhccCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCc
Q 011873           21 VIIKPKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHK  100 (475)
Q Consensus        21 ~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~  100 (475)
                      +++++..++.+.||||..          .     .+++.++.++++ ||+ |   ++++.+.++|+|++.+++++.+++ 
T Consensus         9 ~iyr~~~~pl~~~PGp~~----------~-----~~p~~~~~~l~~-~gp-v---~~~~~~~~vv~~~~~v~~vl~~~~-   67 (411)
T 2jjn_A            9 CCARRTLTTIDEVPGMAD----------E-----TALLDWLGTMRE-KQP-V---WQDRYGVWHVFRHADVQTVLRDTA-   67 (411)
T ss_dssp             --------CCCSCCCSSC----------H-----HHHHHHHHHHHH-HCS-E---EECTTSCEEECSHHHHHHHHHCTT-
T ss_pred             HhhhcccCCCCCCCCccc----------c-----cChHHHHHHHHH-hCC-c---ccCCCCeEEECCHHHHHHHHcCcc-
Confidence            345566678888898871          1     456778888865 999 8   345577999999999999998754 


Q ss_pred             ccccCchhhhhhh-cCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEeh-hhHHHHH
Q 011873          101 LFKPWLPRIIENS-FKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVH-DLSRKFI  177 (475)
Q Consensus       101 ~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~-~~~~~~~  177 (475)
                      .|++.....+... .+..+++. +|+.|+++|+++++.|+...++++.+.+.+.+.+++++   .++++|+. +....++
T Consensus        68 ~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~---~~~~~d~~~~~~~~~~  144 (411)
T 2jjn_A           68 TFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLAD---AGESFDLVDVLAFPLP  144 (411)
T ss_dssp             TEESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHT---SCSEEEHHHHTTTHHH
T ss_pred             cccCcccccCCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHhc---CCCceeHHHHHHHHHH
Confidence            4554432222221 22236666 99999999999999999999999999999999999986   35689998 4556899


Q ss_pred             HHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHH
Q 011873          178 FALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDIL  257 (475)
Q Consensus       178 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~  257 (475)
                      +++++.+ ||.+..+. +++......+...  ..+.+++...+++..++.+.+.+++.++++++++       ...+|++
T Consensus       145 ~~vi~~~-fG~~~~~~-~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l  213 (411)
T 2jjn_A          145 VTIVAEL-LGLPPMDH-EQFGDWSGALVDI--QMDDPTDPALAERIADVLNPLTAYLKARCAERRA-------DPGDDLI  213 (411)
T ss_dssp             HHHHHHH-HTCCSCCC-STTCCHHHHHHHS--CCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHH
T ss_pred             HHHHHHH-cCCCHHHH-HHHHHHHHHHHhc--cCccccchHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHH
Confidence            9999998 99865431 2222222222221  1122221122345566777888889999888775       2357999


Q ss_pred             HHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 011873          258 SLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRM  337 (475)
Q Consensus       258 ~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~l  337 (475)
                      +.+++... ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++                    
T Consensus       214 ~~ll~~~~-~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------  272 (411)
T 2jjn_A          214 SRLVLAEV-DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG--------------------  272 (411)
T ss_dssp             HHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG--------------------
T ss_pred             HHHHhccc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------
Confidence            99997653 344699999999999999999999999999999999999999999999853                    


Q ss_pred             ccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 011873          338 KYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFG  417 (475)
Q Consensus       338 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg  417 (475)
                       ||+|||+|+||++||+++++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.+    ...++|||
T Consensus       273 -~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----~~~~~pFG  347 (411)
T 2jjn_A          273 -RIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG----GAAQLSFG  347 (411)
T ss_dssp             -GHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS----SCCCGGGC
T ss_pred             -hHHHHHHHHhhhCCCcCCcceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC----CCCccCCC
Confidence             8999999999999999988999999999999999999999999999999999999999999999853    13689999


Q ss_pred             CCCCCCccHHHHHHHHHHHHHHHHhcce-EEEecCCccc--ccCccCCCCCCcceEeeeCC
Q 011873          418 AGPHICPGKEFARLKLLVFFHNLVRKFR-WEKIIPDEKM--IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       418 ~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~~~~~~~--~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +|+|.|+|+++|++|++++++.|+++|+ +++.++ ...  ..+....+..+++|++++|.
T Consensus       348 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~lpv~~~~~~  407 (411)
T 2jjn_A          348 HGVHFCLGAPLARLENRVALEEIIARFGRLTVDRD-DERLRHFEQIVLGTRHLPVLAGSSP  407 (411)
T ss_dssp             SSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCS-SCCCCBCCSSSSSBSCCEEECSCCT
T ss_pred             CCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCC-CceeccccccccCcceeEEEecCCC
Confidence            9999999999999999999999999995 999743 333  44557778888999998763


No 34 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.1e-63  Score=477.54  Aligned_cols=400  Identities=16%  Similarity=0.209  Sum_probs=311.3

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhcccc-CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccC
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKK-GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPW  105 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~-~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~  105 (475)
                      .++++|||     ++|++.+..... . .+++.++.++.+ ||+ ||++++ ++.++++|++++.+++++++.+ .|++.
T Consensus         3 ~~~~~pp~-----~~g~l~~~~~~~-~~~~p~~~~~~l~~-~gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~fs~r   73 (428)
T 1cpt_A            3 ARATIPEH-----IARTVILPQGYA-DDEVIYPAFKWLRD-EQP-LAMAHIEGYDPMWIATKHADVMQIGKQPG-LFSNA   73 (428)
T ss_dssp             TTCCSCHH-----HHHHHHSSGGGG-CHHHHHHHHHHHHH-HCS-EEEECCTTSCCEEEECSHHHHHHHHHCTT-TEESS
T ss_pred             cccccchh-----hhcccCChhhhc-ccCCccHHHHHHHH-hCC-eeeccccCCCCeEEEccHHHHHHHHcCch-hccCc
Confidence            35678888     889765542111 1 247888888766 798 999998 5788999999999999997654 45433


Q ss_pred             ch-hhh----h-h-h---cC-----CCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEe
Q 011873          106 LP-RII----E-N-S---FK-----SSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKV  169 (475)
Q Consensus       106 ~~-~~~----~-~-~---~g-----~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~  169 (475)
                      .. ..+    . . +   +|     ..+++. +|+.|+++|+++++.|+.++++++.+.+.+.+.++++.....++++|+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~  153 (428)
T 1cpt_A           74 EGSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDF  153 (428)
T ss_dssp             SSCSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEH
T ss_pred             cccccCCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeh
Confidence            22 111    1 1 2   43     235666 999999999999999999999999999999999999864444368999


Q ss_pred             hh-hHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCC------cccchhhhhhhHHHHHHHHHHHHHH
Q 011873          170 HD-LSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPG------TKFGRAVRAGREFHQRFRNMIKQRR  242 (475)
Q Consensus       170 ~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~~i~~~~  242 (475)
                      .. ....+++++++.+ ||.+.++ ..++......+..........+|.      ..+++..++.+.+.+++.+.|++++
T Consensus       154 ~~~~~~~~~~~vi~~~-fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~  231 (428)
T 1cpt_A          154 MTDCALYYPLHVVMTA-LGVPEDD-EPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRR  231 (428)
T ss_dssp             HHHTTTTHHHHHHHHH-HTCCGGG-HHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhhhHHHHHHHH-cCCCHhH-HHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            75 5567999999999 9987643 233333222221110000000111      1113445566777888888888776


Q ss_pred             HHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcc
Q 011873          243 LEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANS  322 (475)
Q Consensus       243 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~  322 (475)
                      +       ....|+++.+++... ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++     
T Consensus       232 ~-------~~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----  298 (428)
T 1cpt_A          232 S-------CPKDDVMSLLANSKL-DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA-----  298 (428)
T ss_dssp             T-------SCCSSHHHHHHHCBS-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----
T ss_pred             c-------CCCCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH-----
Confidence            4       234699999997643 344599999999999999999999999999999999999999999999853     


Q ss_pred             CCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCC
Q 011873          323 KGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSR  402 (475)
Q Consensus       323 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R  402 (475)
                                      |++|||+|+||++||++.++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|||
T Consensus       299 ----------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR  362 (428)
T 1cpt_A          299 ----------------LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR  362 (428)
T ss_dssp             ----------------GHHHHHHHHHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTC
T ss_pred             ----------------HHHHHHHHHHHhCCcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCC
Confidence                            8999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcce-EEEecCCcccccCccCCCCCCcceEeeeC
Q 011873          403 YQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFR-WEKIIPDEKMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       403 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  474 (475)
                      |.+      .++|||+|+|.|+|++||++|++++++.|+++|+ +++.+ +.............+++|+++||
T Consensus       363 ~~~------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          363 FPN------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-PPRLVATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             CSC------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-CCEECCCSSBCSEEECEEEEEEC
T ss_pred             CCC------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-CcccccCccccCcceeeEEeeCC
Confidence            953      3899999999999999999999999999999997 88863 33333445566667899999986


No 35 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1.2e-63  Score=473.94  Aligned_cols=396  Identities=15%  Similarity=0.140  Sum_probs=315.4

Q ss_pred             cCCCCCCCCCCCCCCccc--chhhhhhhccccCChhHHHHHHHHhhc--CcceeeccCCCcEEEecCcccchhhhccCCc
Q 011873           25 PKPTTQNLPPGRKGWPFI--GETLEYHALSKKGCIEKFMSQRMQKYS--SKIFKTSYLGADMVFLCSAEGNKLLFSNEHK  100 (475)
Q Consensus        25 ~~~~~~~~ppgp~~~p~~--G~~~~~~~~~~~~~~~~~~~~~~~~yG--~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~  100 (475)
                      .+.++.++||||.+.|..  +.+-.+.......+++.++.+++ +||  + +|++...| +.++++|++.+++++++.+ 
T Consensus         5 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~p-v~~~~~~g-~~vvv~~~~~v~~vl~~~~-   80 (415)
T 2zwu_A            5 TIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPD-LVWTRCNG-GHWIATRGQLIREAYEDYR-   80 (415)
T ss_dssp             ------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCS-EEEECGGG-CEEEECSHHHHHHHHHCTT-
T ss_pred             cccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCC-eEEecCCC-CeEEEcCHHHHHHHHcCcc-
Confidence            345677899999998864  43211111101267899999985 899  8 99998434 6999999999999997654 


Q ss_pred             ccccCc--hhhhhhhcCCCC-CCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HH
Q 011873          101 LFKPWL--PRIIENSFKSSP-NIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RK  175 (475)
Q Consensus       101 ~~~~~~--~~~~~~~~g~~~-~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~  175 (475)
                      .|++..  .......++. + ++. +|+.|+++|+++++.|+...++++.+.+.+.+.++++.+.. .+++|+.+++ ..
T Consensus        81 ~f~~~~~~~~~~~~~~~~-~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-~~~~d~~~~~~~~  158 (415)
T 2zwu_A           81 HFSSECPFIPREAGEAYD-FIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRP-QGQCNFTEDYAEP  158 (415)
T ss_dssp             TEETTSCSSSHHHHHHCC-CTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGG-GTEEEHHHHTTTH
T ss_pred             ccCCCcccCCCCcccccc-ccCccCCCcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCccHHHHHHHH
Confidence            454332  1112222344 5 777 99999999999999999999999999999999999986433 3589999754 78


Q ss_pred             HHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCccc
Q 011873          176 FIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKD  255 (475)
Q Consensus       176 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  255 (475)
                      +++++++.+ ||.+.++ .+++......+...      ..|.    +..++.+.+.+++.++++++++       ....|
T Consensus       159 ~~~~vi~~~-~G~~~~~-~~~~~~~~~~~~~~------~~P~----~~~~~~~~~~~~~~~~i~~r~~-------~~~~d  219 (415)
T 2zwu_A          159 FPIRIFMLL-AGLPEED-IPHLKYLTDQMTRP------DGSM----TFAEAKEALYDYLIPIIEQRRQ-------KPGTD  219 (415)
T ss_dssp             HHHHHHHHH-HTCCGGG-HHHHHHHHHHHHSC------CSSS----CHHHHHHHHHHHHHHHHHHHHH-------SCCSS
T ss_pred             HHHHHHHHH-cCCCHHH-HHHHHHHHHHHHhc------cCHH----HHHHHHHHHHHHHHHHHHHHHh-------CCCCC
Confidence            999999998 9987653 23444433333221      1122    4556777888999999998875       23579


Q ss_pred             HHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhc
Q 011873          256 ILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLK  335 (475)
Q Consensus       256 ~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~  335 (475)
                      +++.+++... ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++                  
T Consensus       220 ll~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------  280 (415)
T 2zwu_A          220 AISIVANGQV-NGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE------------------  280 (415)
T ss_dssp             HHHHHHTCEE-TTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------
T ss_pred             HHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------
Confidence            9999997643 344589999999999999999999999999999999999999999999842                  


Q ss_pred             cCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 011873          336 RMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVP  415 (475)
Q Consensus       336 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~  415 (475)
                         ||+|||+|+||++||++++ |.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||      +..|+|
T Consensus       281 ---~l~a~i~E~lRl~p~~~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~  350 (415)
T 2zwu_A          281 ---RIPAACEELLRRFSLVADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ------KVSHTT  350 (415)
T ss_dssp             ---GHHHHHHHHHHHTCCBCCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCS------SCCCCT
T ss_pred             ---HHHHHHHHHHhhcCCcCCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCC------CCCCCC
Confidence               8999999999999999988 999999999999999999999999999999999999999999995      246899


Q ss_pred             cCCCCCCCccHHHHHHHHHHHHHHHHhcce-EEEecCCccc-ccCccCCCCCCcceEeeeCC
Q 011873          416 FGAGPHICPGKEFARLKLLVFFHNLVRKFR-WEKIIPDEKM-IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       416 Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~~~~~~~-~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ||+|+|.|+|++||.+|++++++.|+++|+ +++.++ ..+ ..+.+..+..+++|+++||+
T Consensus       351 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~lpv~~~~r~  411 (415)
T 2zwu_A          351 FGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG-AQIQHKSGIVSGVQALPLVWDPAT  411 (415)
T ss_dssp             TCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT-CCCCEECSSBCEESCCEEECCGGG
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC-cccccCCccccCcceeEEEEecCC
Confidence            999999999999999999999999999998 999753 333 44667788889999999874


No 36 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=7.6e-63  Score=468.87  Aligned_cols=373  Identities=18%  Similarity=0.254  Sum_probs=304.2

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-------hhhhhhcCCCCCCC-CchHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-------RIIENSFKSSPNIT-LQDEF  126 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-------~~~~~~~g~~~~~~-~~~~~  126 (475)
                      .+++.++.++ ++||+ +|++.+++.++++|++++.+++++.+++ .+++...       .......|. +++. +|+.|
T Consensus        13 ~~p~~~~~~~-r~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~~h   88 (404)
T 3ejb_B           13 KNPYSFYDTL-RAVHP-IYKGSFLKYPGWYVTGYEETAAILKDAR-FKVRTPLPESSTKYQDLSHVQNQ-MMLFQNQPDH   88 (404)
T ss_dssp             HCHHHHHHHH-HHHCS-EEEEEETTEEEEEECCHHHHHHHHHCTT-EECCCSSCTTCCTTHHHHHHHHT-SGGGCCTTHH
T ss_pred             cCchHHHHHH-HhhCC-EeeccCCCCCEEEEecHHHHHHHHhCcc-cccCcccccccccccchhhhhhc-chhhcCCchH
Confidence            6788889887 68999 9999999999999999999999998774 4543321       112233444 6777 99999


Q ss_pred             HHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhh-HHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHH
Q 011873          127 NSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDL-SRKFIFALCSELMYNIHDTRTADELENLAHCIM  205 (475)
Q Consensus       127 ~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  205 (475)
                      +++|+++++.|+++.++++.+.+.+.+.+++++ +.+++.+|+... ...++.++++.+ ||.+..+ .+.+......+.
T Consensus        89 ~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~~  165 (404)
T 3ejb_B           89 RRLRTLASGAFTPRTTESYQPYIIETVHHLLDQ-VQGKKKMEVISDFAFPLASFVIANI-IGVPEED-REQLKEWAASLI  165 (404)
T ss_dssp             HHHHHHHHGGGSHHHHHTTHHHHHHHHHHHHHT-TTTTSEEEHHHHTHHHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchHHHHHHHHHHHHHHHH-cCCCHHH-HHHHHHHHHHHH
Confidence            999999999999999999999999999999996 556678998655 456888999885 8976543 234443333332


Q ss_pred             hhhhhcCcCCCCc--ccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q 011873          206 TEFFIIPVNIPGT--KFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAV  283 (475)
Q Consensus       206 ~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~  283 (475)
                      ..+ ..    |..  ...+..++.+.+.+++.+.++++++       ...+|+++.++ . ..++..++++++..++..+
T Consensus       166 ~~~-~~----p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll-~-~~~~~~ls~~el~~~~~~l  231 (404)
T 3ejb_B          166 QTI-DF----TRSRKALTEGNIMAVQAMAYFKELIQKRKR-------HPQQDMISMLL-K-GREKDKLTEEEAASTCILL  231 (404)
T ss_dssp             GGG-ST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHH-H-C----CCCHHHHHHHHHHH
T ss_pred             Hhc-cC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCcchHHHHHH-h-cccCCCCCHHHHHHHHHHH
Confidence            221 11    221  2344566777888888888888774       44579999999 3 3344569999999999999


Q ss_pred             HHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccc
Q 011873          284 LIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALT  363 (475)
Q Consensus       284 ~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~  363 (475)
                      ++||+|||+++++|++++|++||++|+|+++|++                     |++|||+|+||++||++.++|.+++
T Consensus       232 ~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~  290 (404)
T 3ejb_B          232 AIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD---------------------LIGTAVEECLRYESPTQMTARVASE  290 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSBCEEEEEESS
T ss_pred             HHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCcccccceEeCC
Confidence            9999999999999999999999999999998853                     7899999999999999988999999


Q ss_pred             ccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011873          364 EVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       364 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      |++++||.||||+.|.++.+++|+||++|+||++|+||||-      ..++|||+|+|.|+|++||.+|++++++.|+++
T Consensus       291 d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~  364 (404)
T 3ejb_B          291 DIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR  364 (404)
T ss_dssp             CEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999983      458999999999999999999999999999999


Q ss_pred             c-eEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          444 F-RWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       444 f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      | ++++.+++..+..+...++...++|+++||.
T Consensus       365 f~~~~l~~~~~~~~~~~~~~~~~~lpv~~~~~~  397 (404)
T 3ejb_B          365 MPSLNLADFEWRYRPLFGFRALEELPVTFEASW  397 (404)
T ss_dssp             CTTCEEC--CCCBCSCSSBCCBSCCEEECC---
T ss_pred             CcccccCCCCceeccCcccCCcceeEEEEeccc
Confidence            9 9999855555666778888889999999873


No 37 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=2.2e-62  Score=464.98  Aligned_cols=369  Identities=17%  Similarity=0.234  Sum_probs=305.6

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchhh--------hhhhcCCCCCCC-CchH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPRI--------IENSFKSSPNIT-LQDE  125 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~--------~~~~~g~~~~~~-~~~~  125 (475)
                      .+++.++.++ ++||+ +|++++++.+.++|++++.+++++.+++  |++.....        .....| .+++. +|+.
T Consensus        20 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~~   94 (411)
T 3a4g_A           20 QNPHPAYAAL-RAEDP-VRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPT-PMMILMDPPD   94 (411)
T ss_dssp             TCCHHHHHHH-HHHCS-EEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSS-CCGGGCCTTH
T ss_pred             cCchHHHHHH-HhcCC-eeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccc-cccccCCchH
Confidence            6789999999 99999 9999998889999999999999998764  54332111        111123 36666 9999


Q ss_pred             HHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEeh-hhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHH
Q 011873          126 FNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVH-DLSRKFIFALCSELMYNIHDTRTADELENLAHCI  204 (475)
Q Consensus       126 ~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  204 (475)
                      |+++|+++++.|+...++++.+.+.+.+.+++++ +..++++|+. ++...+++++++.+ ||.+.++ ...+......+
T Consensus        95 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~  171 (411)
T 3a4g_A           95 HTRLRKLVGRSFTVRRMNELEPRITEIADGLLAG-LPTDGPVDLMREYAFQIPVQVICEL-LGVPAED-RDDFSAWSSVL  171 (411)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-SCSSSCEEHHHHTTTTHHHHHHHHH-HTCCGGG-HHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHH-HHhcCCccHHHHHHHHhHHHHHHHH-hCCCHHH-HHHHHHHHHHH
Confidence            9999999999999999999999999999999996 5445789997 45578999999975 9987643 23333333322


Q ss_pred             HhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHH
Q 011873          205 MTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVL  284 (475)
Q Consensus       205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~  284 (475)
                      .    ..   .|.   .+..++.+.+.+++.++++++++       ...+|+++.+++...+++..++++++..++..++
T Consensus       172 ~----~~---~p~---~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~  234 (411)
T 3a4g_A          172 V----DD---SPA---DDKNAAMGKLHGYLSDLLERKRT-------EPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLL  234 (411)
T ss_dssp             T----TS---SCT---TTHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHH
T ss_pred             h----cc---CCH---HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Confidence            1    11   121   34556777888899999988875       2346999999976532445699999999999999


Q ss_pred             HhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-cccccccc
Q 011873          285 IGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALT  363 (475)
Q Consensus       285 ~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~  363 (475)
                      +||+|||+++++|++++|++||++|+|+++|+                     .|++|||+|+||++||++ +++|.+.+
T Consensus       235 ~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~  293 (411)
T 3a4g_A          235 IAGHETTVNLIGNGVLALLTHPDQRKLLAEDP---------------------SLISSAVEEFLRFDSPVSQAPIRFTAE  293 (411)
T ss_dssp             HHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHTCSBCBCCCEEESS
T ss_pred             HhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH---------------------HHHHHHHHHHHHhcccccCCceeEeCC
Confidence            99999999999999999999999999999874                     289999999999999999 78999999


Q ss_pred             ccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011873          364 EVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       364 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      |++++||.||||+.|.++.+++|+||++|+||++|+||||.      ..++|||+|+|.|||++||++|++++++.|+++
T Consensus       294 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~  367 (411)
T 3a4g_A          294 DVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD  367 (411)
T ss_dssp             CEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999984      458999999999999999999999999999999


Q ss_pred             c-eEEEecCCcc--cccCccCCCCCCcceEeeeCC
Q 011873          444 F-RWEKIIPDEK--MIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       444 f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      | ++++.++...  +..+...++.++++|++++|+
T Consensus       368 f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  402 (411)
T 3a4g_A          368 RPELALAVGLDELVYRESTLVRGLSRMPVTMGPRS  402 (411)
T ss_dssp             CTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCC
T ss_pred             CCCcEECCCccccccccCccccCcceeEEEecCcc
Confidence            9 6999754322  333556778889999999985


No 38 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=3.5e-62  Score=464.45  Aligned_cols=387  Identities=14%  Similarity=0.176  Sum_probs=307.3

Q ss_pred             CCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhh-cCcceeecc-CCCcEEEecCcccchhhhccCCcccccCch
Q 011873           30 QNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKY-SSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWLP  107 (475)
Q Consensus        30 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~y-G~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  107 (475)
                      ...||+|+++|.+.....+.     .+++.++.++ ++| |+ +|++.+ ++.+.++|+|++++++++.+++  +.....
T Consensus         4 ~~~~~~~~~~P~~~~~~~~~-----~~p~~~~~~l-~~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~   74 (412)
T 2zbx_A            4 TATTPQTTDAPAFPSNRSCP-----YQLPDGYAQL-RDTPGP-LHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRT   74 (412)
T ss_dssp             ----CCCCSSCBSSCCCSST-----TSCCHHHHHH-HHSSSS-EEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTT
T ss_pred             CCCCCCCCCCCCCCCCchhc-----cChHHHHHHH-HhcCCC-eEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcc
Confidence            45678888888663223333     6789999999 888 99 999997 7889999999999999998753  222111


Q ss_pred             -hhhhh-------hc-CCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHH-H
Q 011873          108 -RIIEN-------SF-KSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRK-F  176 (475)
Q Consensus       108 -~~~~~-------~~-g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~-~  176 (475)
                       ..+..       .. ...++++ +|+.|+++|+++++.|+...++++.+.+.+.+.++++++...++++|+.+++.. +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~  154 (412)
T 2zbx_A           75 DDNFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPV  154 (412)
T ss_dssp             STTSCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHH
T ss_pred             cccccccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence             01110       10 2235666 999999999999999999999999999999999999864444578999988764 8


Q ss_pred             HHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccH
Q 011873          177 IFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDI  256 (475)
Q Consensus       177 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~  256 (475)
                      ++++++. +||.+..+ .+.+......+.    ...    . . ++..++.+.+.+++.++++++++       ...+|+
T Consensus       155 ~~~vi~~-~~G~~~~~-~~~~~~~~~~~~----~~~----~-~-~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~  215 (412)
T 2zbx_A          155 PSMVICR-LLGVPYAD-HEFFQDASKRLV----QST----D-A-QSALTARNDLAGYLDGLITQFQT-------EPGAGL  215 (412)
T ss_dssp             HHHHHHH-HHTCCGGG-HHHHHHHHHHHH----HCS----S-H-HHHHHHHHHHHHHHHHHHHHHHH-------SCCSSH
T ss_pred             HHHHHHH-HcCCCHHH-HHHHHHHHHHHh----ccC----c-H-HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCH
Confidence            8999997 69987542 233333333222    111    1 1 45566777888889999988775       234789


Q ss_pred             HHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhcc
Q 011873          257 LSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKR  336 (475)
Q Consensus       257 ~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~  336 (475)
                      ++.+++... ++..++++++..++..+++||+|||+++++|++++|++||++|+||++|+                    
T Consensus       216 l~~ll~~~~-~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------------  274 (412)
T 2zbx_A          216 VGALVADQL-ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR--------------------  274 (412)
T ss_dssp             HHHHHHTTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG--------------------
T ss_pred             HHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh--------------------
Confidence            999997653 34459999999999999999999999999999999999999999999864                    


Q ss_pred             CccHHHHHHhhhcCCCCCC-ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 011873          337 MKYTWNVISEVLRMEPPNS-GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVP  415 (475)
Q Consensus       337 lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~  415 (475)
                       .|++|||+|+||++||++ +++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||      +..++|
T Consensus       275 -~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~  347 (412)
T 2zbx_A          275 -SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS------ARHHLA  347 (412)
T ss_dssp             -GGHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------CTTCCT
T ss_pred             -HhHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCC------CCCccC
Confidence             279999999999999999 689999999999999999999999999999999999999999999997      346899


Q ss_pred             cCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecCCcc--cccCccCCCCCCcceEee
Q 011873          416 FGAGPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       416 Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~  472 (475)
                      ||+|+|.|+|++||++|++++++.|+++| ++++.++...  ...+.+.+....++|+..
T Consensus       348 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          348 FGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             TCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             CCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeecc
Confidence            99999999999999999999999999999 7999754332  333446666667777754


No 39 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=4.2e-62  Score=464.91  Aligned_cols=374  Identities=19%  Similarity=0.246  Sum_probs=306.0

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc------hh-h-hhhhcC---CCCCCC-C
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL------PR-I-IENSFK---SSPNIT-L  122 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~------~~-~-~~~~~g---~~~~~~-~  122 (475)
                      .+++.++.++ ++||+ +|+ . ++.+.++|+|++.+++++.+++  |.+..      .. . ....++   ..++++ +
T Consensus        26 ~~p~~~~~~l-~~~Gp-v~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (419)
T 1q5d_A           26 EDPFPAIERL-REATP-IFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   99 (419)
T ss_dssp             TCCHHHHHHH-HHHCS-EEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             hChHHHHHHH-HhhCC-ccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC
Confidence            6788999988 78999 999 5 6788999999999999998775  55443      11 1 111221   236777 9


Q ss_pred             chHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehh-hHHHHHHHHHHHHhhcCCCCchhHHHHHHH
Q 011873          123 QDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHD-LSRKFIFALCSELMYNIHDTRTADELENLA  201 (475)
Q Consensus       123 ~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~  201 (475)
                      |+.|+++|+++++.|+...++++.+.+.+.+.+++++ +..++++|+.. ....+++++++.+ ||.+.++ .+++....
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-~~~~~~~~  176 (419)
T 1q5d_A          100 PEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDA-RSGQEEFDVVRDYAEGIPMRAISAL-LKVPAEC-DEKFRRFG  176 (419)
T ss_dssp             HHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHH-HTTSSCEETTTTTGGGSHHHHHHHH-TTCCGGG-HHHHHHHH
T ss_pred             chHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHHHH-hCCCHHH-HHHHHHHH
Confidence            9999999999999999999999999999999999986 44445899886 4589999999998 9987643 23444443


Q ss_pred             HHHHhhhhhcCcCCCC--cccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcc-cHHHHHHhhhccCCCCCCHHHHHH
Q 011873          202 HCIMTEFFIIPVNIPG--TKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHK-DILSLLLLEKNKDGEDLTESEIAL  278 (475)
Q Consensus       202 ~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-d~~~~ll~~~~~~~~~~~~~~i~~  278 (475)
                      ..+.....  +..+|.  ..+++..++.+.+.+++.++++++++       ...+ |+++.+++... ++..++++++..
T Consensus       177 ~~~~~~~~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~~dll~~ll~~~~-~~~~l~~~ei~~  246 (419)
T 1q5d_A          177 SATARALG--VGLVPRVDEETKTLVASVTEGLALLHGVLDERRR-------NPLENDVLTMLLQAEA-DGSRLSTKELVA  246 (419)
T ss_dssp             HHHHHHTT--TTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSCHHHHHHHHHH-SSTTCCHHHHHH
T ss_pred             HHHHHhcc--cccccCChHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCCHHHHHHhhhc-cCCCCCHHHHHH
Confidence            33333221  222232  12345566777888889999988765       2345 99999997653 344599999999


Q ss_pred             HHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-cc
Q 011873          279 KMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GT  357 (475)
Q Consensus       279 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~  357 (475)
                      ++..+++||+|||+++++|++++|++||++|+||++|+                     .||+|||+|+||++||++ .+
T Consensus       247 ~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~  305 (419)
T 1q5d_A          247 LVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP---------------------GLMRNALDEVLRFDNILRIGT  305 (419)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBSSEE
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHHHHhCCcccccc
Confidence            99999999999999999999999999999999999983                     389999999999999999 78


Q ss_pred             ccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHH
Q 011873          358 FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFF  437 (475)
Q Consensus       358 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l  437 (475)
                      +|.+.+|++|+||.||||+.|.++.+++||||++|+||++|+||||      +..++|||+|+|.|+|++||++|+++++
T Consensus       306 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l  379 (419)
T 1q5d_A          306 VRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD------TSASLAYGRGPHVCPGVSLARLEAEIAV  379 (419)
T ss_dssp             EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCGGGCCTTHHHHHHHHHHHH
T ss_pred             ceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC------CCCCCCCCCCCCcCccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999994      2568999999999999999999999999


Q ss_pred             HHHHhcc-eEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          438 HNLVRKF-RWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       438 a~ll~~f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +.|+++| ++++.++ ..+..+.+..+..+++|+++||+
T Consensus       380 a~ll~~f~~~~~~~~-~~~~~~~~~~~~~~l~v~~~~r~  417 (419)
T 1q5d_A          380 GTIFRRFPEMKLKET-PVFGYHPAFRNIESLNVILKPSK  417 (419)
T ss_dssp             HHHHHHCTTCEECSC-CEECCCSSBCCEEECEEESSCC-
T ss_pred             HHHHHhCCCeEECCC-cccccccccCCCceeEEEEecCC
Confidence            9999999 8999764 33445667888889999999985


No 40 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=8.3e-62  Score=460.28  Aligned_cols=372  Identities=17%  Similarity=0.212  Sum_probs=305.1

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchhhhhhhcCCCCCCC-CchHHHHHHHHh
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPRIIENSFKSSPNIT-LQDEFNSLRRVI  133 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~R~~~  133 (475)
                      .+++.++.++++ ||+ ||++.   .+.++|+||+.+++++.+++ .|++......... +..+++. +|+.|+++|+++
T Consensus        18 ~~p~~~~~~l~~-~Gp-v~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~-~~~~l~~~~g~~h~~~R~~~   90 (398)
T 2xkr_A           18 REARAAYRWMRA-NQP-VFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIRPDQP-ALPMMIDMDDPAHLLRRKLV   90 (398)
T ss_dssp             TTHHHHHHHHHH-HCS-EEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSSTTSC-CCSSGGGCCTTHHHHHHHHH
T ss_pred             cChhHHHHHHHh-cCC-eeecC---CCeEEEecHHHHHHHHhCcc-cccCccccCCccc-ccccccccCchHHHHHHHHh
Confidence            678899999887 999 99875   37899999999999998765 4543321111122 3336667 999999999999


Q ss_pred             hccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEeh-hhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcC
Q 011873          134 GSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVH-DLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIP  212 (475)
Q Consensus       134 ~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~  212 (475)
                      ++.|++..++.+.+.+.+.+.++++. +..++++|+. ++...+++++++.+ ||.+..+ ..++......+....  .+
T Consensus        91 ~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-~~~~~~~~~~~~~~~--~~  165 (398)
T 2xkr_A           91 NAGFTRKRVKDKEASIAALCDTLIDA-VCERGECDFVRDLAAPLPMAVIGDM-LGVRPEQ-RDMFLRWSDDLVTFL--SS  165 (398)
T ss_dssp             GGGSCHHHHHTTHHHHHHHHHHHHHT-TTTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHHHHH--TS
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHh-hhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH-HHHHHHHHHHHHhcc--Cc
Confidence            99999999999999999999999996 5445689998 55678999999998 9987643 234444443333221  23


Q ss_pred             cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChH
Q 011873          213 VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPS  292 (475)
Q Consensus       213 ~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~  292 (475)
                      .++|. .+++..++.+.+.+++.++++++++       ....|+++.+++... ++..++++++..++..+++||+|||+
T Consensus       166 ~~~p~-~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTt~  236 (398)
T 2xkr_A          166 HVSQE-DFQITMDAFAAYNDFTRATIAARRA-------DPTDDLVSVLVSSEV-DGERLSDDELVMETLLILIGGDETTR  236 (398)
T ss_dssp             CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHSHHHH
T ss_pred             ccchh-hHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhHHHH
Confidence            23331 2345566777888899999988775       235799999997653 34459999999999999999999999


Q ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEe
Q 011873          293 IAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTI  372 (475)
Q Consensus       293 ~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~i  372 (475)
                      ++++|++++|++||++|+|+++|++                     |++|||+|+||++||++.++|.+.+|++++||.|
T Consensus       237 ~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~I  295 (398)
T 2xkr_A          237 HTLSGGTEQLLRNRDQWDLLQRDPS---------------------LLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTAL  295 (398)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHCGG---------------------GHHHHHHHHHHHHCSBCEEEEEESSCEEETTEEE
T ss_pred             HHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhcccccCcceEECCCeeECCEEE
Confidence            9999999999999999999999863                     8999999999999999988899999999999999


Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecC
Q 011873          373 PKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIP  451 (475)
Q Consensus       373 p~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~  451 (475)
                      |||+.|.++.+++||||++|+||++|+||||..      .++|||+|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus       296 p~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  369 (398)
T 2xkr_A          296 CAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVAD  369 (398)
T ss_dssp             CTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCT
T ss_pred             CCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence            999999999999999999999999999999853      489999999999999999999999999999999 5999743


Q ss_pred             Cccc---ccCccCCCCCCcceEeeeCC
Q 011873          452 DEKM---IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       452 ~~~~---~~~~~~~p~~~~~v~~~~r~  475 (475)
                       ..+   ..+...+...+++|+++||.
T Consensus       370 -~~~~~~~~~~~~~~~~~lpv~~~p~~  395 (398)
T 2xkr_A          370 -DSVLPLRPANFVSGLESMPVVFTPSP  395 (398)
T ss_dssp             -TCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred             -cceecccCcccccCccceeEEecCCC
Confidence             333   34556777788999999874


No 41 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=2.4e-62  Score=464.22  Aligned_cols=371  Identities=18%  Similarity=0.251  Sum_probs=303.8

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCc-----hh--hhhhhcCCCCCCC-CchH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWL-----PR--IIENSFKSSPNIT-LQDE  125 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-----~~--~~~~~~g~~~~~~-~~~~  125 (475)
                      .+++.++.++ ++||+ +|++++ ++.+.++|+|++.+++++.++.  |.+..     ..  .+....+..++++ +|+.
T Consensus        19 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (403)
T 3aba_A           19 FLPPDGIADI-RAAAP-VTRATFTSGHEAWLVTGYEEVRALLRDSS--FSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE   94 (403)
T ss_dssp             TSCCTTHHHH-HHHCS-EEEEECTTSCEEEEECCHHHHHHHHHCTT--EESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred             cChhHHHHHH-HhcCC-eeeeccCCCceEEEEcCHHHHHHHHcCCC--cccccccccccccccccccccccccccCCchh
Confidence            6778888898 89999 999997 7889999999999999998753  43321     11  1112112336777 9999


Q ss_pred             HHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHH
Q 011873          126 FNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCI  204 (475)
Q Consensus       126 ~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  204 (475)
                      |+++|+++++.|+...++++.+.+.+.+.++++++...++++|+..++ ..+++++++. +||.+..+ .+++...... 
T Consensus        95 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~~~-  171 (403)
T 3aba_A           95 HTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISD-LFGVPVER-RAEFQDIAEA-  171 (403)
T ss_dssp             HHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHHHHHHHH-
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHH-
Confidence            999999999999999999999999999999998643246789998665 5799999998 69987543 2333332222 


Q ss_pred             HhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHH
Q 011873          205 MTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVL  284 (475)
Q Consensus       205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~  284 (475)
                         +....  .+  . ++..++.+.+.+++.++++++++       ...+|+++.+++... ++..++++++..++..++
T Consensus       172 ---~~~~~--~~--p-~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~~l~~~ei~~~~~~l~  235 (403)
T 3aba_A          172 ---MMRVD--QD--A-AATEAAGMRLGGLLYQLVQERRA-------NPGDDLISALITTED-PDGVVDDMFLMNAAGTLL  235 (403)
T ss_dssp             ---HSBSS--SC--H-HHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHTSCC-TTCCCSHHHHHHHHHHHH
T ss_pred             ---HHhcc--Cc--H-HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhhcc-CCCCCCHHHHHHHHHHHH
Confidence               22111  11  1 45556777888899999988775       234689999997643 344699999999999999


Q ss_pred             HhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-cccccccc
Q 011873          285 IGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALT  363 (475)
Q Consensus       285 ~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~  363 (475)
                      +||+|||+++++|++++|++||++|+||++|+                     .||+|||+|+||++||++ .++|.+.+
T Consensus       236 ~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~  294 (403)
T 3aba_A          236 IAAHDTTACMIGLGTALLLDSPDQLALLREDP---------------------SLVGNAVEELLRYLTIGQFGGERVATR  294 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSCTTCEEEEESS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHhcCCCcccccceEeCC
Confidence            99999999999999999999999999999874                     279999999999999999 78999999


Q ss_pred             ccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011873          364 EVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       364 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      |++++||.||||+.|.++.+++||||++|+||++|+||||.      ..|+|||+|+|.|+|++||++|++++++.|+++
T Consensus       295 d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~  368 (403)
T 3aba_A          295 DVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP------APHLAFGFGAHQCIGQQLARIELQIVFETLFRR  368 (403)
T ss_dssp             CEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999983      468999999999999999999999999999999


Q ss_pred             c-eEEEecCCcc--cccCccCCCCCCcceEeeeCC
Q 011873          444 F-RWEKIIPDEK--MIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       444 f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      | ++++.++...  ...+.+.++.++++|++++|.
T Consensus       369 f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          369 LPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             STTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred             CCCceecCCccccccccCcccCCcceeEEEecCCC
Confidence            9 6998754332  334557788999999999883


No 42 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=3.7e-63  Score=474.39  Aligned_cols=380  Identities=17%  Similarity=0.220  Sum_probs=298.2

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh-hhhhhcCCCCCCC-CchHHHHHHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR-IIENSFKSSPNIT-LQDEFNSLRRV  132 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~-~~~~~~g~~~~~~-~~~~~~~~R~~  132 (475)
                      .+++.++.++ ++||| ||++..++  .++|++|+.+++++++++. |++.... .....+|.++++. +|+.|+++|++
T Consensus        53 ~~p~~~~~~l-r~~gp-v~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~  127 (441)
T 3nc3_A           53 NNPYAYFSQL-REEDP-VHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI  127 (441)
T ss_dssp             HCGGGTHHHH-HHHCS-EEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSCC-------------CCHHH
T ss_pred             cChHHHHHHH-HhcCC-EEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccccCCCccccCCcHHHHHHHHH
Confidence            5778888776 68999 99987655  8999999999999988764 5543222 2233455545777 99999999999


Q ss_pred             hhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhh-HHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhc
Q 011873          133 IGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDL-SRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFII  211 (475)
Q Consensus       133 ~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  211 (475)
                      +++.|++..++++.+.+.+.+.++++. +..++++|+... ...+++++++. +||.+..+ .+++......+...+..+
T Consensus       128 ~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-~~~~~~~~~~~~~~~~~~  204 (441)
T 3nc3_A          128 VVRSFIGDALDHLSPLIKQNAENLLAP-YLERGKSDLVNDFGKTFAVCVTMD-MLGLDKRD-HEKISEWHSGVADFITSI  204 (441)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHHHTT-TTTTTEEECCCCCHHHHHHHHHHH-HTTCCGGG-HHHHHHHHHHHHHHHHCS
T ss_pred             HHhhcCHHHHHHHHHHHHHHHHHHHHH-HHhcCCCcHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999985 666678997554 45689999998 48987643 344444444443332211


Q ss_pred             CcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccCh
Q 011873          212 PVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNP  291 (475)
Q Consensus       212 ~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt  291 (475)
                        ..+.....+..++.+.+.+++.++|+++++       ...+|+++.+++... ++..++++++..++..+++||+|||
T Consensus       205 --~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-------~~~~Dll~~Ll~~~~-~~~~ls~~el~~~~~~ll~AG~eTT  274 (441)
T 3nc3_A          205 --SQSPEARAHSLWCSEQLSQYLMPVIKERRV-------NPGSDLISILCTSEY-EGMALSDKDILALILNVLLAATEPA  274 (441)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-------SCCSSHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             --cCChHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHhhhHHH
Confidence              112212344556777888888888888764       345799999997654 3456999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceE
Q 011873          292 SIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYT  371 (475)
Q Consensus       292 ~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~  371 (475)
                      +++++|++++|++||++|+|+++|+                     +|++|||+|+||++||++.++|.+++|++++|+.
T Consensus       275 a~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~  333 (441)
T 3nc3_A          275 DKTLALMIYHLLNNPEQMNDVLADR---------------------SLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGME  333 (441)
T ss_dssp             HHHHHHHHHHHHTSHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEESSSCE
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHhhhcCCcccCccEEECCCEEECCEE
Confidence            9999999999999999999999874                     5999999999999999998889999999999999


Q ss_pred             eCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eE
Q 011873          372 IPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RW  446 (475)
Q Consensus       372 ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~  446 (475)
                      ||||+.|.++.+++|+||++|+||++|+||||+.++    ..+..|+|||+|+|.|+|++||.+|++++++.|+++| ++
T Consensus       334 Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~  413 (441)
T 3nc3_A          334 IKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNI  413 (441)
T ss_dssp             ECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTC
T ss_pred             ECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999997653    1257899999999999999999999999999999999 99


Q ss_pred             EEecCCcccccCccCCCCCCcceEeee
Q 011873          447 EKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       447 ~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      ++.+++.....+.+.++..+++|+++|
T Consensus       414 ~l~~~~~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          414 RLEEDFCYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             EECTTCCCCEECSSBCEESCCEEECC-
T ss_pred             EECCCCcccccCccccCcceeEEEEec
Confidence            998665556667788888899999875


No 43 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=2.3e-63  Score=486.02  Aligned_cols=401  Identities=17%  Similarity=0.256  Sum_probs=298.6

Q ss_pred             cCCCCCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcE-------EEecCcccchhhhcc
Q 011873           25 PKPTTQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADM-------VFLCSAEGNKLLFSN   97 (475)
Q Consensus        25 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~-------vvv~~p~~~~~i~~~   97 (475)
                      ....+.+.||||.+||++|+++++....+..+++.++.++.++||++||++++++.++       +++++++..+.++..
T Consensus        22 ~~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~  101 (495)
T 3dsk_A           22 SKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDV  101 (495)
T ss_dssp             --CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred             CCCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccc
Confidence            3446778999999999999999887544447899999999999998899999988887       566676666666654


Q ss_pred             CC----cccccCchhhhhhhcCC---CCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc---CCCc
Q 011873           98 EH----KLFKPWLPRIIENSFKS---SPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD---GNDV  166 (475)
Q Consensus        98 ~~----~~~~~~~~~~~~~~~g~---~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~---~~~~  166 (475)
                      ..    ..+...++... .++|.   .+++. +|+.|+++|+++.+.|+... +.+.+.+.+.+.++++.+..   ++++
T Consensus       102 ~~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~  179 (495)
T 3dsk_A          102 DKVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGK  179 (495)
T ss_dssp             TTEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            22    22323333333 56663   24455 89999999999999998654 88999999999998885322   2578


Q ss_pred             EEehhhHHHHHHHHHHHHhhcCCCCch--hHHHHHHHHHHHhhhhhcCc---CCCCcccchhhhhhhHHHHHHHHHHHHH
Q 011873          167 VKVHDLSRKFIFALCSELMYNIHDTRT--ADELENLAHCIMTEFFIIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQR  241 (475)
Q Consensus       167 vd~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~  241 (475)
                      +|+.+++..+++++++.++||.+....  ..++...+..+.. +...|.   .+|.               ++.+++.++
T Consensus       180 vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~p~---------------~~~~~~~~~  243 (495)
T 3dsk_A          180 ADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVL-FNLHPLLSIGLPR---------------VIEEPLIHT  243 (495)
T ss_dssp             EESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHH-HHHGGGCCCSSCH---------------HHHHHHHSS
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHH-HhhhhHhHhccHH---------------HHHHHHHHh
Confidence            999999999999999999999865432  1222222222211 111122   2331               111111111


Q ss_pred             H-----------HHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHhh-CHHH
Q 011873          242 R-----------LEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVL-IGAYDNPSIAISTIIKFLAE-LPEI  308 (475)
Q Consensus       242 ~-----------~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~  308 (475)
                      +           .+..+    ...+.++.+++...+  ..++++++..+++.++ +||++||+.+++|++++|+. ||++
T Consensus       244 ~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~~~--~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~  317 (495)
T 3dsk_A          244 FSLPPALVKSDYQRLYE----FFLESAGEILVEADK--LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQV  317 (495)
T ss_dssp             SCCCGGGGHHHHHHHHH----HHHHHCHHHHHHHHH--TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             hcccchhhhhhHHHHHH----HHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHH
Confidence            0           00000    001222344443322  2489999998666655 99999999999999999996 9999


Q ss_pred             HHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc----CceEeCCCCEEEEeccc
Q 011873          309 YEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI----DGYTIPKGFKLHWAVNA  384 (475)
Q Consensus       309 ~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~  384 (475)
                      |+|||+|++++++.  .++.++++++++||||+|||+|+||++||++...|.+.+|+++    +||.||||+.|.++.++
T Consensus       318 ~~~lr~Ei~~~~~~--~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~  395 (495)
T 3dsk_A          318 HNRLAEEIRSVIKS--NGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPL  395 (495)
T ss_dssp             HHHHHHHHHHHHHH--TTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHH
T ss_pred             HHHHHHHHHHHhcc--CCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHH
Confidence            99999999999874  2467999999999999999999999999999888889999999    49999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCC-CCCCcc---------cccCCCCCCCccHHHHHHHHHHHHHHHHhcceEEEecC
Q 011873          385 THKDPECFPNPEKFDPSRYQGND-IVPFSY---------VPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP  451 (475)
Q Consensus       385 ~~~d~~~~~dp~~F~P~R~~~~~-~~~~~~---------~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~  451 (475)
                      +|+||++|+||++|+|+||++++ .....|         +|||+|+|.|||++||.+|++++++.|+++|++...++
T Consensus       396 ~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  472 (495)
T 3dsk_A          396 ATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV  472 (495)
T ss_dssp             HHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             hhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence            99999999999999999999752 122334         45555559999999999999999999999999877643


No 44 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=3.4e-62  Score=462.97  Aligned_cols=369  Identities=16%  Similarity=0.169  Sum_probs=302.3

Q ss_pred             CChhHHHHHHHHhh--cCcceeeccCCCcEEEecCcccchhhhccCCcccccCchhh--hhhhcCCCCCCC-CchHHHHH
Q 011873           55 GCIEKFMSQRMQKY--SSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPRI--IENSFKSSPNIT-LQDEFNSL  129 (475)
Q Consensus        55 ~~~~~~~~~~~~~y--G~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~g~~~~~~-~~~~~~~~  129 (475)
                      .+++.++.+++++|  |+ ||++.+++ +.++|+|++.+++++++.+ .|++.....  .....+..+++. +|+.|+++
T Consensus        19 ~~p~~~~~~l~~~Y~~Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   95 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTP-IGWSEAYG-GHWVVAGYKEIQAVIQNTK-AFSNKGVTFPRYETGEFELMMAGQDDPVHKKY   95 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCS-EEEECGGG-CEEEECSHHHHHHHHTCCS-SEEGGGCSSSCC----CCCTTTTCCTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCCC-eEEecCCC-CEEEEccHHHHHHHHhChh-hccCCcccccCCCCcccccCcccCCchHHHHH
Confidence            78999999999999  99 99999875 5899999999999996544 444332111  112223334556 99999999


Q ss_pred             HHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhh-HHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhh
Q 011873          130 RRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDL-SRKFIFALCSELMYNIHDTRTADELENLAHCIMTEF  208 (475)
Q Consensus       130 R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~  208 (475)
                      |+++++.|+...++++.+.+.+.+.++++. +..++.+|+... ...+++++++. +||.+..+ .+++.+....+..  
T Consensus        96 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~~~~~~--  170 (398)
T 4fb2_A           96 RQLVAKPFSPEATDLFTEQLRQSTNDLIDA-RIELGEGDAATWLANEIPARLTAI-LLGLPPED-GDTYRRWVWAITH--  170 (398)
T ss_dssp             HHHHHTTTCHHHHHTTHHHHHHHHHHHHHT-TTTTTEEEHCCCCCTTHHHHHHHH-HTTSCGGG-HHHHHHHHHHHHH--
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHhc--
Confidence            999999999999999999999999999986 555567887554 46899999999 68986543 3344443333322  


Q ss_pred             hhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcc
Q 011873          209 FIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAY  288 (475)
Q Consensus       209 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~  288 (475)
                             +. ...+..++.+.+.+++.+.++++++       ....|+++.+++... ++..++++++..++..+++||+
T Consensus       171 -------~~-~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG~  234 (398)
T 4fb2_A          171 -------VE-NPEEGAEIFAELVAHARTLIAERRT-------NPGNDIMSRVIMSKI-DGESLSEDDLIGFFTILLLGGI  234 (398)
T ss_dssp             -------CC-CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHCCCCCC
T ss_pred             -------CC-CHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHccc-CCCCCCHHHHHHHHHHHHHHhh
Confidence                   11 1235667778888999999998876       345799999998654 3445999999999999999999


Q ss_pred             cChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccC
Q 011873          289 DNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTID  368 (475)
Q Consensus       289 ~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~  368 (475)
                      |||+++++|++++|++||++|+|+++|++                     |++|||+|+||++||++ ++|.+.+|++|+
T Consensus       235 ~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~-~~R~~~~d~~l~  292 (398)
T 4fb2_A          235 DNTARFLSSVFWRLAWDIELRRRLIAHPE---------------------LIPNAVDELLRFYGPAM-VGRLVTQEVTVG  292 (398)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHHCCBC-EEEEECSCEEET
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCCcC-CCeeeCCCEEEC
Confidence            99999999999999999999999999864                     67899999999999999 999999999999


Q ss_pred             ceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEE
Q 011873          369 GYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RWE  447 (475)
Q Consensus       369 g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~  447 (475)
                      ||.||||+.|.++.+++|+||++|+||++|+||||      +..|+|||+|+|.|||++||.+|++++++.|+++| +++
T Consensus       293 g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~  366 (398)
T 4fb2_A          293 DITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERT------PNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFS  366 (398)
T ss_dssp             TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred             CEEECCCCEEEechHhhcCChhhCCCcCeeCCCCC------CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcE
Confidence            99999999999999999999999999999999997      35689999999999999999999999999999999 999


Q ss_pred             EecCCcccccCccCCCCCCcceEeeeCC
Q 011873          448 KIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       448 ~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +.+++..............++|++++|.
T Consensus       367 ~~~~~~~~~~~~~~~~~~~lpv~~~~~~  394 (398)
T 4fb2_A          367 LDPNKECEWLMGQVAGMLHVPIIFPKGK  394 (398)
T ss_dssp             ECTTSCCEEECSSBCEEEECEEECCCCC
T ss_pred             ECCCCCceeccccccccceeEEEEcCCC
Confidence            9865432222344555556999998873


No 45 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=8.6e-63  Score=468.28  Aligned_cols=387  Identities=15%  Similarity=0.193  Sum_probs=305.4

Q ss_pred             ccchhhhhhhccccCChhHHHHHHHHhhcCcce-----eeccCCCcEEEecCcccchhhhccCCcccccCchh--hhh--
Q 011873           41 FIGETLEYHALSKKGCIEKFMSQRMQKYSSKIF-----KTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR--IIE--  111 (475)
Q Consensus        41 ~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf-----~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~--~~~--  111 (475)
                      +.|+.+++.......+++.++.++ ++||+ +|     ++.+  .+.++|+|++.+++++.++ ..|++....  .+.  
T Consensus        11 ~~~~~~~~~~~~~~~~p~~~~~~l-~~~Gp-v~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~   85 (414)
T 2uuq_A           11 VMSHEFQLATAETWPNPWPMYRAL-RDHDP-VHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGEL   85 (414)
T ss_dssp             --CCSCCCCCTTTTTCCHHHHHHH-HHHCS-EEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHH
T ss_pred             hhcCccCcCChhhccCchHHHHHH-HhcCC-EEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcc
Confidence            344445444433336788899888 57999 99     8876  6799999999999999876 345443211  111  


Q ss_pred             hh---cCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEeh-hhHHHHHHHHHHHHhh
Q 011873          112 NS---FKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVH-DLSRKFIFALCSELMY  186 (475)
Q Consensus       112 ~~---~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~-~~~~~~~~~~~~~~~f  186 (475)
                      .+   .+..++++ +|+.|+++|+++++.|++..++++.+.+.+.+.++++++.. .+++|+. +++..+++++++. +|
T Consensus        86 ~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~vdl~~~~~~~~~~~vi~~-~~  163 (414)
T 2uuq_A           86 EMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA-NGGGDIVTELFKPLPSMVVAH-YL  163 (414)
T ss_dssp             HHHTCSSSCCGGGCCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEEHHHHTTTHHHHHHHHH-HT
T ss_pred             cccccccccccccCCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCccHHHHHHHHhHHHHHHH-Hh
Confidence            22   22346777 99999999999999999999999999999999999986433 3579996 6678999999999 59


Q ss_pred             cCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhcc
Q 011873          187 NIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNK  266 (475)
Q Consensus       187 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~  266 (475)
                      |.+.++ .+++......+.... .+   .|..  .+..++.+++.+++.++++++++       ...+|+++.+++...+
T Consensus       164 G~~~~~-~~~~~~~~~~~~~~~-~~---~p~~--~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~~  229 (414)
T 2uuq_A          164 GVPEED-WTQFDGWTQAIVAAN-AV---DGAT--TGALDAVGSMMAYFTGLIERRRT-------EPADDAISHLVAAGVG  229 (414)
T ss_dssp             TCCGGG-HHHHHHHHHHHHHHH-HC----------CCHHHHHHHHHHHHHHHHHHTT-------SCCSSHHHHHHHTTTT
T ss_pred             CCCHHH-HHHHHHHHHHHHhhc-cc---CCch--hHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhcccc
Confidence            987653 233433333332210 11   0221  23456677888888888887764       2357999999976531


Q ss_pred             -CCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHH
Q 011873          267 -DGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVIS  345 (475)
Q Consensus       267 -~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  345 (475)
                       ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+                     +|++|||+
T Consensus       230 ~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~  288 (414)
T 2uuq_A          230 ADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP---------------------EGIPDAVE  288 (414)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHH
Confidence             33348899999999999999999999999999999999999999999875                     38999999


Q ss_pred             hhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCC-CCCCCCCCCCCCCCCCCCCcccccCCCCCCCc
Q 011873          346 EVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECF-PNPEKFDPSRYQGNDIVPFSYVPFGAGPHICP  424 (475)
Q Consensus       346 E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~  424 (475)
                      |+||++||++.++|.+.+|++++||.||||+.|.++.+++|+||++| +||++|+||||.      ..++|||+|+|.|+
T Consensus       289 E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~------~~~~~FG~G~r~C~  362 (414)
T 2uuq_A          289 ELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP------RNILTFSHGAHHCL  362 (414)
T ss_dssp             HHHHHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC------CSCCTTCSSTTCCT
T ss_pred             HHHHhCCCcCCcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC------CCCcCCCCCCccCC
Confidence            99999999998899999999999999999999999999999999999 999999999985      35899999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcc-eEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          425 GKEFARLKLLVFFHNLVRKF-RWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       425 G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |++||++|++++++.|+++| ++++.+++..+....+.++.++++|+++||.
T Consensus       363 G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          363 GAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             THHHHHHHHHHHHHHHHHHCCSEEECGGGCEECCCSSBCCEEECEEEEC---
T ss_pred             CHHHHHHHHHHHHHHHHHhCcccEECCCCccccccccccCcceeEEEecCCC
Confidence            99999999999999999999 6999744334445667888899999999884


No 46 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=5.5e-62  Score=462.16  Aligned_cols=382  Identities=20%  Similarity=0.279  Sum_probs=306.5

Q ss_pred             CCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeecc-CCCc-EEEecCcccchhhhccCCcccccCchh
Q 011873           31 NLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSY-LGAD-MVFLCSAEGNKLLFSNEHKLFKPWLPR  108 (475)
Q Consensus        31 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~-~~~~-~vvv~~p~~~~~i~~~~~~~~~~~~~~  108 (475)
                      +.+|+|+++|+.++   ..     .+++.++.+++ +||+ +|++.+ +|.+ .++|+|++.+++++.++  .|.+....
T Consensus         8 ~~~~~~~~~p~~~~---~~-----~~p~~~~~~l~-~~Gp-v~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~   75 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PG-----SDFDPVLTELM-REGP-VTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVM   75 (406)
T ss_dssp             CCSCCEEECCCCCC---CT-----TCCCHHHHHHH-HHCS-EEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTT
T ss_pred             hhccCCCCCCCCcc---cc-----cCchHHHHHHH-hcCC-eeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCC
Confidence            46778888888776   22     67888898884 7999 999986 5666 99999999999999863  34433211


Q ss_pred             -h----hhh-hcC-CCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHH
Q 011873          109 -I----IEN-SFK-SSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFA  179 (475)
Q Consensus       109 -~----~~~-~~g-~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~  179 (475)
                       .    ... ..+ ..++++ +|+.|+++|+++++.|+...++++.+.+.+.+.++++.+...++++|+...+ ..++++
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~  155 (406)
T 1s1f_A           76 DRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIA  155 (406)
T ss_dssp             TTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHH
T ss_pred             CCCcccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHH
Confidence             1    111 211 236777 9999999999999999999999999999999999998643246789988665 579999


Q ss_pred             HHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHH
Q 011873          180 LCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSL  259 (475)
Q Consensus       180 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~  259 (475)
                      +++. +||.+.++ .+++......+.....      +   .++..++.+.+.+++.++++++++       ...+|+++.
T Consensus       156 vi~~-~~G~~~~~-~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~  217 (406)
T 1s1f_A          156 VICE-LMGVPATD-RHSMHTWTQLILSSSH------G---AEVSERAKNEMNAYFSDLIGLRSD-------SAGEDVTSL  217 (406)
T ss_dssp             HHHH-HHTCCGGG-HHHHHHHHHHHHHHHT------T---CCCCHHHHTHHHHHHHHHHHTSCC-------SCCCSHHHH
T ss_pred             HHHH-HhCCCHHH-HHHHHHHHHHHHhccC------C---HHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHH
Confidence            9998 59987643 2333333333322111      1   134456677788888888877653       234699999


Q ss_pred             HHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCcc
Q 011873          260 LLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKY  339 (475)
Q Consensus       260 ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~  339 (475)
                      +++...+  ..++++++..++..+++|| |||+++++|++++|++||++|+|+++|++                     |
T Consensus       218 ll~~~~~--~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~  273 (406)
T 1s1f_A          218 LGAAVGR--DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE---------------------I  273 (406)
T ss_dssp             HHHHHHT--TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------G
T ss_pred             HHHhhcc--cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------H
Confidence            9986543  4599999999999999999 99999999999999999999999998852                     7


Q ss_pred             HHHHHHhhhcCCCCCC--ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 011873          340 TWNVISEVLRMEPPNS--GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFG  417 (475)
Q Consensus       340 l~a~i~E~lRl~p~~~--~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg  417 (475)
                      ++|||+|+||++||++  +++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.      ..++|||
T Consensus       274 l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~~~FG  347 (406)
T 1s1f_A          274 RPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP------NPHVSFG  347 (406)
T ss_dssp             HHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC--------CCCCTTC
T ss_pred             HHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC------CCCCCCC
Confidence            9999999999999999  7899999999999999999999999999999999999999999999996      3589999


Q ss_pred             CCCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecCCcc--cccCccCCCCCCcceEee
Q 011873          418 AGPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       418 ~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~  472 (475)
                      +|+|.|+|++||.+|++++++.|+++| ++++.+++..  +..+.+.++..+++|++.
T Consensus       348 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          348 FGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence            999999999999999999999999999 7999765333  334557788888998874


No 47 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=8.2e-62  Score=460.16  Aligned_cols=369  Identities=17%  Similarity=0.234  Sum_probs=301.1

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh-h---------hhhhcCCCCCCC-Cc
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR-I---------IENSFKSSPNIT-LQ  123 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~-~---------~~~~~g~~~~~~-~~  123 (475)
                      .+++.++.++ ++||+ +|+ +  |.+.++|+|++.+++++.++  .|.+.... .         ...+++. ++++ +|
T Consensus        13 ~~p~~~~~~l-~~yGp-v~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g   84 (397)
T 3buj_A           13 RDPYPSYHWL-LRHDP-VHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGD-IILFQDE   84 (397)
T ss_dssp             HCCHHHHHHH-HHHCS-EEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTT-CGGGCCT
T ss_pred             cCchHHHHHH-HhcCC-eee-C--CCCeEEEcCHHHHHHHHcCC--CcccCccccccccccccccccccccc-ccccCCc
Confidence            5678888766 69999 998 6  67899999999999999863  34432111 0         1111144 6777 99


Q ss_pred             hHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehh-hHHHHHHHHHHHHhhcCCCCchhHHHHHHHH
Q 011873          124 DEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHD-LSRKFIFALCSELMYNIHDTRTADELENLAH  202 (475)
Q Consensus       124 ~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~  202 (475)
                      +.|+++|+++++.|+...++++.+.+.+.+.+++++ +..++++|+.. ....+++++++.+ ||.+.++ .+++.....
T Consensus        85 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~  161 (397)
T 3buj_A           85 PDHGRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRP-ALARGAMDVVDELAYPLALRAVLGL-LGLPAAD-WGAVGRWSR  161 (397)
T ss_dssp             THHHHHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHH-HHTTTEEEHHHHTHHHHHHHHHHHH-HTCCGGG-HHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HhhcCCeehHHHHHHHhHHHHHHHH-hCCCHHH-HHHHHHHHH
Confidence            999999999999999999999999999999999986 44456899875 4578999999998 9987643 233433333


Q ss_pred             HHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 011873          203 CIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQA  282 (475)
Q Consensus       203 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~  282 (475)
                      .+...   +...++...+++..++.+.+.+++.+++++++++       ..+|+++.+++... ++. ++++++..++..
T Consensus       162 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~-~~~-ls~~ei~~~~~~  229 (397)
T 3buj_A          162 DVGRT---LDRGASAEDMRRGHAAIAEFADYVERALARRRRE-------GGEDLLALMLDAHD-RGL-MSRNEIVSTVVT  229 (397)
T ss_dssp             HHHGG---GCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCSHHHHHHHHHH-TTS-SCHHHHHHHHHH
T ss_pred             HHHhh---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCCHHHHHHHhhh-cCC-CCHHHHHHHHHH
Confidence            33222   1112222233456667788888999999888753       24699999998653 334 999999999999


Q ss_pred             HHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccc
Q 011873          283 VLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREAL  362 (475)
Q Consensus       283 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~  362 (475)
                      +++||+|||+++++|++++|++||++|+|+++|+                     .||+|||+|+||++||++.++|.+.
T Consensus       230 ~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~R~~~  288 (397)
T 3buj_A          230 FIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP---------------------DLLAQAVEECLRYDPSVQSNTRQLD  288 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSCCEEEEEES
T ss_pred             HHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH---------------------HHHHHHHHHHHhhcCcccCcceEEC
Confidence            9999999999999999999999999999999984                     2899999999999999998899999


Q ss_pred             cccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHh
Q 011873          363 TEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVR  442 (475)
Q Consensus       363 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~  442 (475)
                      +|++++||.||||+.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|++||++|++++++.| +
T Consensus       289 ~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~  361 (397)
T 3buj_A          289 VDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-A  361 (397)
T ss_dssp             SCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-H
T ss_pred             CCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-h
Confidence            999999999999999999999999999999999999999995      358999999999999999999999999999 9


Q ss_pred             cc-eEEEecCCc--ccccCccCCCCCCcceEeeeC
Q 011873          443 KF-RWEKIIPDE--KMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       443 ~f-~~~~~~~~~--~~~~~~~~~p~~~~~v~~~~r  474 (475)
                      +| ++++.++..  ....+.+.++..+++|+++||
T Consensus       362 ~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          362 RLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             TSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             cCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence            99 899976522  233456778889999999988


No 48 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=7.2e-62  Score=461.12  Aligned_cols=368  Identities=17%  Similarity=0.221  Sum_probs=301.6

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCC--CcEEEecCcccchhhhccCCcccccCchh-----hhhhhcC--CCCCCC-Cch
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLG--ADMVFLCSAEGNKLLFSNEHKLFKPWLPR-----IIENSFK--SSPNIT-LQD  124 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~--~~~vvv~~p~~~~~i~~~~~~~~~~~~~~-----~~~~~~g--~~~~~~-~~~  124 (475)
                      ++++.++.+++ +||+ +|++.+++  .+.++|++++.+++++.++  .|.+....     .+....+  ..++++ +|+
T Consensus        27 ~~p~~~~~~l~-~~Gp-v~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  102 (411)
T 2dkk_A           27 PEFDPVLAELM-REGP-LTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQP  102 (411)
T ss_dssp             SCCCHHHHHHH-TTCS-EEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred             ccccHHHHHHH-hcCC-eEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCch
Confidence            45668888886 8999 99998754  7899999999999999864  34332211     1222332  346777 999


Q ss_pred             HHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHH-HHHHHHHHHHhhcCCCCchhHHHHHHHHH
Q 011873          125 EFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSR-KFIFALCSELMYNIHDTRTADELENLAHC  203 (475)
Q Consensus       125 ~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  203 (475)
                      .|+++|+++++.|++++++++.+.+.+.+.++++++..+++++|+..++. .+++++++. +||.+..+ .++    +..
T Consensus       103 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-~~~----~~~  176 (411)
T 2dkk_A          103 DHNRLRRAVAGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSE-VMGVPAAD-RER----VHS  176 (411)
T ss_dssp             HHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH-HHH----HHH
T ss_pred             HHHHHHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-HHH----HHH
Confidence            99999999999999999999999999999999986444455899987765 699999998 59987653 222    333


Q ss_pred             HHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q 011873          204 IMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAV  283 (475)
Q Consensus       204 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~  283 (475)
                      +...+....   +  ..++..++.+.+.+++.++++++++       ...+|+++.+++.  .++..++++++..++..+
T Consensus       177 ~~~~~~~~~---~--~~~~~~~~~~~l~~~~~~~i~~r~~-------~~~~dll~~ll~~--~~~~~ls~~el~~~~~~l  242 (411)
T 2dkk_A          177 WTRQIISTS---G--GAEAAERAKRGLYGWITETVRARAG-------SEGGDVYSMLGAA--VGRGEVGETEAVGLAGPL  242 (411)
T ss_dssp             HHGGGCSSC---S--CSHHHHHHHHHHHHHHHHHHHTTTT-------CCSSCHHHHHHHH--HHTTSSCTTSHHHHHHHH
T ss_pred             HHHHHHhcc---c--hHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHh--cCCCCCCHHHHHHHHHHH
Confidence            333332211   1  2345566777788888888887653       2356999999986  234459999999999999


Q ss_pred             HHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-c-ccccc
Q 011873          284 LIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-G-TFREA  361 (475)
Q Consensus       284 ~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~-~~r~~  361 (475)
                      ++|| |||+++++|++++|++||++|+||++|++                     |++|||+|+||++||++ . ++|.+
T Consensus       243 ~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R~~  300 (411)
T 2dkk_A          243 QIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG---------------------ARGTALDELLRWISHRTSVGLARIA  300 (411)
T ss_dssp             HHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT---------------------CCHHHHHHHHHHSCCBSSCCCCEEE
T ss_pred             HHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHhhCCccccCccceEE
Confidence            9999 99999999999999999999999998852                     78999999999999999 7 89999


Q ss_pred             ccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHH
Q 011873          362 LTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLV  441 (475)
Q Consensus       362 ~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll  441 (475)
                      .+|++|+|+.||||+.|.++.+++|+||++|+||++|+||||.      ..|+|||+|+|.|+|++||.+|++++++.|+
T Consensus       301 ~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll  374 (411)
T 2dkk_A          301 LEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP------NPHLAYGNGHHFCTGAVLARMQTELLVDTLL  374 (411)
T ss_dssp             SSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred             CCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999996      4589999999999999999999999999999


Q ss_pred             hcc-eEEEecCCcc--cccCccCCCCCCcceEeeeC
Q 011873          442 RKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       442 ~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~r  474 (475)
                      ++| ++++.+++..  +..+.+.++..+++|++++|
T Consensus       375 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          375 ERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             HHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             HHCCCcEECCCccccccccCcccCCcceeEEEeccC
Confidence            999 9999765332  33456778888999999998


No 49 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.2e-61  Score=458.70  Aligned_cols=370  Identities=17%  Similarity=0.241  Sum_probs=299.8

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCc----hh--hhh---hhc---CCCCCCC-
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWL----PR--IIE---NSF---KSSPNIT-  121 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~----~~--~~~---~~~---g~~~~~~-  121 (475)
                      .+++.++.++ ++||+ +|++++++.+.++|+||+.+++++.+++  ++...    ..  ...   .++   +..++++ 
T Consensus        15 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   90 (408)
T 1odo_A           15 ADHHTEHRTL-REGGP-ATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTA   90 (408)
T ss_dssp             TTHHHHHHHH-HTTCS-EEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred             CChHHHHHHH-HHhCC-eEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccccc
Confidence            6788999999 99999 9999988888999999999999998764  22211    10  010   011   2236667 


Q ss_pred             CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhh--cCCCcEEehhhHH-HHHHHHHHHHhhcCCCCchhHHHH
Q 011873          122 LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYW--DGNDVVKVHDLSR-KFIFALCSELMYNIHDTRTADELE  198 (475)
Q Consensus       122 ~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~--~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~  198 (475)
                      +|+.|+++|+++++.|+...++++.+.+.+.+.++++++.  .+++++|+.+++. .+++++++. +||.+..+ .+++.
T Consensus        91 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~  168 (408)
T 1odo_A           91 YGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-RDGFR  168 (408)
T ss_dssp             CHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-HHHHH
T ss_pred             CChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-HHHHH
Confidence            9999999999999999999999999999999999998643  2367899998876 599999996 69986432 23333


Q ss_pred             HHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccC--CCCCCHHHH
Q 011873          199 NLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKD--GEDLTESEI  276 (475)
Q Consensus       199 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~--~~~~~~~~i  276 (475)
                      .....+..    .  ..   ...+..++.+.+.+++.++++++++       ...+|+++.+++...++  +..++++++
T Consensus       169 ~~~~~~~~----~--~~---~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~~~~~~~~l~~~ei  232 (408)
T 1odo_A          169 ALVDGVFD----T--TL---DQAEAQANTARLYEVLDQLIAAKRA-------TPGDDMTSLLIAARDDEGDGDRLSPEEL  232 (408)
T ss_dssp             HHHHHHHC----T--TC---CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHHHCC-----CCCHHHH
T ss_pred             HHHHHHhc----c--cC---CHHHHHHHHHHHHHHHHHHHHHHhh-------CCCCCHHHHHHHhcccccccCCCCHHHH
Confidence            33322221    1  11   1244566777888899999988765       23478999999865432  445999999


Q ss_pred             HHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-
Q 011873          277 ALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-  355 (475)
Q Consensus       277 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-  355 (475)
                      ..++..+++||+|||+++++|++++|++||++|+||++|+                     +|++|||+|+||++||++ 
T Consensus       233 ~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~  291 (408)
T 1odo_A          233 RDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE---------------------VTWADVVEETLRHEPAVKH  291 (408)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS---------------------SCHHHHHHHHHHHSCSBSC
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHhhCCCccC
Confidence            9999999999999999999999999999999999999862                     379999999999999998 


Q ss_pred             ccccccccccccC-ceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHH
Q 011873          356 GTFREALTEVTID-GYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLL  434 (475)
Q Consensus       356 ~~~r~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~  434 (475)
                      +++|.+.+|++++ ||.||||+.|.++.+++||||++|+||++|+|||+      +..|+|||+|+|.|+|++||++|++
T Consensus       292 ~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~pFG~G~r~C~G~~lA~~e~~  365 (408)
T 1odo_A          292 LPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT------VKEHLAFGHGVHFCLGAPLARMEVT  365 (408)
T ss_dssp             EEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS------CCCCCTTCSSTTSCTTHHHHHHHHH
T ss_pred             CcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC------CCCCCCCCCCCccCCCHHHHHHHHH
Confidence            5889999999999 99999999999999999999999999999999994      3579999999999999999999999


Q ss_pred             HHHHHHHhcc-eEEEecCCc--ccccCccCCCCCCcceEeee
Q 011873          435 VFFHNLVRKF-RWEKIIPDE--KMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       435 ~~la~ll~~f-~~~~~~~~~--~~~~~~~~~p~~~~~v~~~~  473 (475)
                      ++++.|+++| ++++..+..  ......+.++.++++|+++|
T Consensus       366 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          366 LALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             HHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             HHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            9999999999 799975433  33345577888999999876


No 50 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=6.1e-62  Score=464.03  Aligned_cols=374  Identities=17%  Similarity=0.214  Sum_probs=296.5

Q ss_pred             CChhHHHHHHHHhhcCcceeeccC--CCcEEEecCcccchhhhccCCcccccCc----------hhh-------hhhhcC
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYL--GADMVFLCSAEGNKLLFSNEHKLFKPWL----------PRI-------IENSFK  115 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~--~~~~vvv~~p~~~~~i~~~~~~~~~~~~----------~~~-------~~~~~g  115 (475)
                      .+++.++.++. +||+ +|+++++  +.++++|+|++.+++++.++  .|++..          ...       .....|
T Consensus        20 ~~p~~~~~~l~-~~Gp-v~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (425)
T 2z3t_A           20 ADPYPVYRRYR-EAAP-VHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE   95 (425)
T ss_dssp             HCCHHHHHHHH-HHCS-EEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred             cChHHHHHHHH-hcCC-eEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence            57888898875 5999 9999987  67899999999999999875  344321          111       112222


Q ss_pred             CCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhh-HHHHHHHHHHHHhhcCCCCch
Q 011873          116 SSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDL-SRKFIFALCSELMYNIHDTRT  193 (475)
Q Consensus       116 ~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~~~~~~fG~~~~~~  193 (475)
                       .++++ +|+.|+++|+++++.|+...++++.+.+.+.+.+++++ +...+++|+... ...+++++++.+ ||.+.++ 
T Consensus        96 -~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~g~~dl~~~~~~~~~~~vi~~~-~G~~~~~-  171 (425)
T 2z3t_A           96 -NWLVFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDR-LRAQRRPDLVEGFAAPLPILVISAL-LGIPEED-  171 (425)
T ss_dssp             -TCGGGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHH-HTTSSSCBHHHHTTTHHHHHHHHHH-HTCCGGG-
T ss_pred             -cccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-HHhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH-
Confidence             36777 99999999999999999999999999999999999996 433347898774 578999999998 9987643 


Q ss_pred             hHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCH
Q 011873          194 ADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTE  273 (475)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~  273 (475)
                      .+++......+...+..++  ++....++..++.+.+.+++.+.++++++       ....|+++.+++...+ +..+++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~~-~~~ls~  241 (425)
T 2z3t_A          172 HTWLRANAVALQEASTTRA--RDGRGYARAEAASQEFTRYFRREVDRRGG-------DDRDDLLTLLVRARDT-GSPLSV  241 (425)
T ss_dssp             HHHHHHHHHHHHTTCTTCC--C---HHHHHHHHHHHHHHHHHHHHCC--------------CHHHHHHHHHHT-TCCCCH
T ss_pred             HHHHHHHHHHHHhhccccC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhcc-CCCCCH
Confidence            2344433333322211111  22222345556677788888888887764       2356899999976543 445999


Q ss_pred             HHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCC
Q 011873          274 SEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPP  353 (475)
Q Consensus       274 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  353 (475)
                      +++..++..+++||+|||+++++|++++|++||++|+||++|++                     |++|||+|+||++||
T Consensus       242 ~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~  300 (425)
T 2z3t_A          242 DGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE---------------------STPAAVEELMRYDPP  300 (425)
T ss_dssp             HHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------------hHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999999999999852                     899999999999999


Q ss_pred             CCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHH
Q 011873          354 NSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKL  433 (475)
Q Consensus       354 ~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~  433 (475)
                      +++++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.      ..++|||+|+|.|+|++||++|+
T Consensus       301 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~  374 (425)
T 2z3t_A          301 VQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA------ERQVGFGLGIHYCLGATLARAEA  374 (425)
T ss_dssp             BCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS------SCCCTTCCSTTCCTTHHHHHHHH
T ss_pred             ccCcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC------CCCCCCCCCCccCCCHHHHHHHH
Confidence            998899999999999999999999999999999999999999999999996      35899999999999999999999


Q ss_pred             HHHHHHHHhcc-eEEEecCCc-ccccCccCCCCCCcceEeeeC
Q 011873          434 LVFFHNLVRKF-RWEKIIPDE-KMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       434 ~~~la~ll~~f-~~~~~~~~~-~~~~~~~~~p~~~~~v~~~~r  474 (475)
                      +++++.|+++| +++ .++.. .+....+.++..+++|++++.
T Consensus       375 ~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~  416 (425)
T 2z3t_A          375 EIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDA  416 (425)
T ss_dssp             HHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC--
T ss_pred             HHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecch
Confidence            99999999999 899 65432 334455678888899988764


No 51 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=5.3e-62  Score=462.92  Aligned_cols=369  Identities=17%  Similarity=0.186  Sum_probs=300.9

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCch-hh------hhh---hcCCCCCCC-C
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWLP-RI------IEN---SFKSSPNIT-L  122 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~~------~~~---~~g~~~~~~-~  122 (475)
                      .+++..+.++ ++||+ +|++++ ++.+.++|+|++.+++++.++.  +..... ..      +..   ..+. ++++ +
T Consensus        24 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~   98 (408)
T 3abb_A           24 YQPPKAYEER-RGESP-LTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAF-PLIGVD   98 (408)
T ss_dssp             TSCCHHHHHH-CCSSS-EEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CC-TTTTCC
T ss_pred             cCchHHHHHH-HhcCC-eeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccc-ccccCC
Confidence            6788899999 89999 999997 7889999999999999998753  222111 00      111   1222 6777 9


Q ss_pred             chHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHH-HHHHHHHHHHhhcCCCCchhHHHHHHH
Q 011873          123 QDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSR-KFIFALCSELMYNIHDTRTADELENLA  201 (475)
Q Consensus       123 ~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~  201 (475)
                      |+.|+++|+++++.|+...++++.+.+.+.+.++++++...++++|+.+++. .+++++++. +||.+..+ .+.+....
T Consensus        99 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~  176 (408)
T 3abb_A           99 DPVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICE-LLGVPYGD-HDFFEECS  176 (408)
T ss_dssp             TTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHHHHHH
T ss_pred             chHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-HHHHHHHH
Confidence            9999999999999999999999999999999999987544567899998776 488999987 69986543 23333333


Q ss_pred             HHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHH
Q 011873          202 HCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQ  281 (475)
Q Consensus       202 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~  281 (475)
                      ..+    ...+    . . ++..++.+.+.+++.++++++++       ...+|+++.+++... ++..++++++..++.
T Consensus       177 ~~~----~~~~----~-~-~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~-~~~~ls~~ei~~~~~  238 (408)
T 3abb_A          177 RNF----VGAA----T-S-AEADAAFGELYTYLHGLVGRKQA-------EPEDGLLDELIARQL-EEGDLDHDEVVMIAL  238 (408)
T ss_dssp             HHH----C------------CCSSHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHHHH-TSSSCCHHHHHHHHH
T ss_pred             HHH----hccc----c-h-HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhccc-CCCCCCHHHHHHHHH
Confidence            222    1111    1 1 34456677888899999988775       234789999997654 344599999999999


Q ss_pred             HHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccc
Q 011873          282 AVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREA  361 (475)
Q Consensus       282 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~  361 (475)
                      .+++||+|||+++++|++++|+.||++|+|+++|+.                     |++|||+|+||++||+++++|.+
T Consensus       239 ~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i~E~lRl~p~~~~~~R~~  297 (408)
T 3abb_A          239 VLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG---------------------AVSGVVEELLRFTSVSDHIVRMA  297 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH---------------------HHHHHHHHHHHHHCSSCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------hHHHHHHHHHHhcCcccccceEe
Confidence            999999999999999999999999999999998643                     68999999999999999889999


Q ss_pred             ccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHH
Q 011873          362 LTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLV  441 (475)
Q Consensus       362 ~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll  441 (475)
                      .+|++++||.||||+.|.++.+++|+||++|+||++|+||||      +..++|||+|+|.|+|++||++|++++++.|+
T Consensus       298 ~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll  371 (408)
T 3abb_A          298 KEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN------ARHHVGFGHGIHQCLGQNLARAELEIALGGLF  371 (408)
T ss_dssp             SSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHH
T ss_pred             CCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999996      34689999999999999999999999999999


Q ss_pred             hcc-eEEEecCCcc--cccCccCCCCCCcceEeeeCC
Q 011873          442 RKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       442 ~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ++| ++++..++..  .....+.++..+++|++++|.
T Consensus       372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          372 ARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             HHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred             HhCccceecCCccccccccCcccCCcceeEEEeCCCC
Confidence            999 8999754332  333557788899999999884


No 52 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=2.1e-62  Score=476.88  Aligned_cols=397  Identities=19%  Similarity=0.302  Sum_probs=294.3

Q ss_pred             CCCCCCCCCCCCcccchhhhhhhccccC-ChhHHHHHHHHhhcCcceeeccCCC-------cEEEecCcccchhhhcc--
Q 011873           28 TTQNLPPGRKGWPFIGETLEYHALSKKG-CIEKFMSQRMQKYSSKIFKTSYLGA-------DMVFLCSAEGNKLLFSN--   97 (475)
Q Consensus        28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~-~~~~~~~~~~~~yG~~vf~i~~~~~-------~~vvv~~p~~~~~i~~~--   97 (475)
                      .|.+.||||.+||++|++.++....... +++.++.++.++||+.||++++++.       ..+++++....+.++..  
T Consensus         6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~   85 (473)
T 3dan_A            6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK   85 (473)
T ss_dssp             SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence            5777899999999999999876433335 7899999999999988999988644       34444555544455531  


Q ss_pred             --CCcccccCchhhhhhhcC---CCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcC----CCcE
Q 011873           98 --EHKLFKPWLPRIIENSFK---SSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDG----NDVV  167 (475)
Q Consensus        98 --~~~~~~~~~~~~~~~~~g---~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~----~~~v  167 (475)
                        +...+....+... ..+|   ..+++. +++.|+++|+++++.|+. .++++.+.+.+.+.++++. |..    ++++
T Consensus        86 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~-~~~~~~~~i~~~~~~ll~~-~~~~~~~~~~v  162 (473)
T 3dan_A           86 VEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKN-SSNRVIPQFETTYTELFEG-LEAELAKNGKA  162 (473)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHSCE
T ss_pred             eeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHhccCCcc
Confidence              1112222222222 3344   223455 899999999999999998 5899999999999999986 432    5789


Q ss_pred             EehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHh---hhhhcCc---CCCCcccchhhhhhhHHHHHHHHHHHHH
Q 011873          168 KVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMT---EFFIIPV---NIPGTKFGRAVRAGREFHQRFRNMIKQR  241 (475)
Q Consensus       168 d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~  241 (475)
                      |+.+++..+++++++.++||.+...  .++.+.+..+..   .+...|.   .+|.               ++..++.++
T Consensus       163 dl~~~~~~~~~~~i~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~lp~---------------~~~~~~~~~  225 (473)
T 3dan_A          163 AFNDVGEQAAFRFLGRAYFNSNPEE--TKLGTSAPTLISSWVLFNLAPTLDLGLPW---------------FLQEPLLHT  225 (473)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSCCGGG--STTTTCHHHHHHHHHHHHHGGGCCCSCCH---------------HHHHHHHSS
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCCCc--hhhhhhHHHHHHHHHHHhccchhhhcchH---------------HHHHHHhhh
Confidence            9999999999999999999987543  122222222211   1112222   2221               111111110


Q ss_pred             -----------HHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHhh-CHHH
Q 011873          242 -----------RLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVL-IGAYDNPSIAISTIIKFLAE-LPEI  308 (475)
Q Consensus       242 -----------~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~  308 (475)
                                 ..+..    ..-.++++.+++..++  ..++++++..+++.++ ++|++||+++++|++++|+. ||++
T Consensus       226 ~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~  299 (473)
T 3dan_A          226 FRLPAFLIKSTYNKLY----DYFQSVATPVMEQAEK--LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENL  299 (473)
T ss_dssp             SCCCGGGTHHHHHHHH----HHHHHHCHHHHHHHHH--HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             ccchHhhhhhchhhhH----HHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHH
Confidence                       00000    0012444555554332  2489999998886666 78888899999999999999 8999


Q ss_pred             HHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccccccc----CceEeCCCCEEEEeccc
Q 011873          309 YEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI----DGYTIPKGFKLHWAVNA  384 (475)
Q Consensus       309 ~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~  384 (475)
                      |++||+|++++++.. .++.++++++++||||+|||+|+||++|+++...|.+++|+++    +||.||||+.|.++.++
T Consensus       300 ~~~lr~Ei~~~~~~~-~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~  378 (473)
T 3dan_A          300 HTQLAEEIRGAIKSY-GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPF  378 (473)
T ss_dssp             HHHHHHHHHHHHHHH-STTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHH
T ss_pred             HHHHHHHHHHHhhcc-cCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHH
Confidence            999999999997631 3468999999999999999999999999999877889999999    99999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCC---------CCCccHHHHHHHHHHHHHHHHhcceEEEecC
Q 011873          385 THKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGP---------HICPGKEFARLKLLVFFHNLVRKFRWEKIIP  451 (475)
Q Consensus       385 ~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~---------r~C~G~~~a~~~~~~~la~ll~~f~~~~~~~  451 (475)
                      +|+||++|+||++|+|+||++.+.....|+|||+|+         |.|||++||.+|++++++.|+++|++...++
T Consensus       379 ~~~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  454 (473)
T 3dan_A          379 ATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL  454 (473)
T ss_dssp             HTTCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             hhCCchhcCCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence            999999999999999999998643334455555555         9999999999999999999999999766543


No 53 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=5.8e-61  Score=455.13  Aligned_cols=368  Identities=20%  Similarity=0.249  Sum_probs=301.2

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCC--CcEEEecCcccchhhhccCCcccccCchhhhhh----hc-C-CCCCCC-CchH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLG--ADMVFLCSAEGNKLLFSNEHKLFKPWLPRIIEN----SF-K-SSPNIT-LQDE  125 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~--~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~----~~-g-~~~~~~-~~~~  125 (475)
                      ++++.++.++.+ ||| |+++...|  .+.++|++++.+++++++.+ .|++........    .. + ..+++. +|+.
T Consensus        37 ~dp~~~~~~lr~-~gp-V~~~~~~g~~~~~~vv~~~~~v~~vl~~~~-~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  113 (415)
T 3mgx_A           37 LERHARWRELAA-EDA-MVWSDPGSSPSGFWSVFSHRACAAVLAPSA-PLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ  113 (415)
T ss_dssp             TTHHHHHHHHHH-HTC-CEEECSSSSSSCEEEECSHHHHHHHSCTTS-SEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred             CChhHHHHHHHh-cCC-EeeccCCCCcCCEEEEecHHHHHHHHhChh-hhcCCccccccccccccccccCCCccccCcHH
Confidence            578999988876 999 99987456  78999999999999997654 454332211111    11 1 225666 9999


Q ss_pred             HHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHH
Q 011873          126 FNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCI  204 (475)
Q Consensus       126 ~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  204 (475)
                      |+++|+++++.|++..++++.+.+.+.+.+++++ +..++++|+..++ ..+++++++.+ ||.+..+ ...+......+
T Consensus       114 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-~~~~~~~~~~~  190 (415)
T 3mgx_A          114 HRKLRKLVGPLLSRAAARKLAERVRIEVGDVLGR-VLDGEVCDAATAIGPRIPAAVVCEI-LGVPAED-EDMLIDLTNHA  190 (415)
T ss_dssp             HHHHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTT-SSSSSCEESTTTTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHH
T ss_pred             HHHHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHH-HHhcCCcchHHHHHHHHHHHHHHHH-cCCCHHH-HHHHHHHHHHH
Confidence            9999999999999999999999999999999986 5445689999877 67999999984 8976543 33444443333


Q ss_pred             HhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHH
Q 011873          205 MTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVL  284 (475)
Q Consensus       205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~  284 (475)
                      ....  .+...+    ....++.+.+.+++.++++++++       ...+|+++.+++..     .++++++..++..++
T Consensus       191 ~~~~--~~~~~~----~~~~~~~~~l~~~~~~~i~~rr~-------~~~~dll~~ll~~~-----~ls~~el~~~~~~ll  252 (415)
T 3mgx_A          191 FGGE--DELFDG----MTPRQAHTEILVYFDELITARRK-------EPGDDLVSTLVTDD-----DLTIDDVLLNCDNVL  252 (415)
T ss_dssp             TSCC--C----C----CCHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCT-----TSCHHHHHHHHHHHH
T ss_pred             Hccc--Ccccch----HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhCC-----CCCHHHHHHHHHHHH
Confidence            2211  111112    22346677888999999998876       34579999999754     499999999999999


Q ss_pred             HhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccc
Q 011873          285 IGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTE  364 (475)
Q Consensus       285 ~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d  364 (475)
                      +||+|||+++++|++++|++||++|+|+++|+                     +|++|||+|+||++||+++++|.+++|
T Consensus       253 ~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d  311 (415)
T 3mgx_A          253 IGGNETTRHAITGAVHALATVPGLLTALRDGS---------------------ADVDTVVEEVLRWTSPAMHVLRVTTAD  311 (415)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS---------------------SCHHHHHHHHHHHHCCBCEEEEEESSC
T ss_pred             HhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHHhcCcccccceecCCC
Confidence            99999999999999999999999999999885                     799999999999999999889999999


Q ss_pred             cccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc
Q 011873          365 VTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF  444 (475)
Q Consensus       365 ~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f  444 (475)
                      ++|+||.||||+.|.++.+++|+||++|+||++|+||||.      ..++|||+|+|.|+|++||.+|++++++.|+++|
T Consensus       312 ~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  385 (415)
T 3mgx_A          312 VTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP------NRHITFGHGMHHCLGSALARIELSVVLRVLAERV  385 (415)
T ss_dssp             EEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             eeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999973      4689999999999999999999999999999999


Q ss_pred             -eEEEecCCcccccCccCCCCCCcceEeeeC
Q 011873          445 -RWEKIIPDEKMIRNPNLMPEKGLPVRLYPN  474 (475)
Q Consensus       445 -~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  474 (475)
                       ++++.++ .....+...+....++|++++|
T Consensus       386 ~~~~l~~~-~~~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          386 SRVDLERE-PAWLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             EEEEECSC-CEECSCSSBCCEEECEEEEEEC
T ss_pred             CCCccCCC-cccccCCcccCceeeeEEEecC
Confidence             8998743 3344455677777899999988


No 54 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=1.6e-61  Score=461.86  Aligned_cols=376  Identities=19%  Similarity=0.249  Sum_probs=301.7

Q ss_pred             cCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-hhhhhh---------cCCCCCCC-C
Q 011873           54 KGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-RIIENS---------FKSSPNIT-L  122 (475)
Q Consensus        54 ~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~~~~~~---------~g~~~~~~-~  122 (475)
                      ..+++.++.++ ++||| ||++.++   .++|++++.++++++++. .+++... ......         .+..+++. +
T Consensus        28 ~~~p~~~~~~l-r~~gp-v~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  101 (418)
T 3r9b_A           28 RADPYPIYDRI-RRGGP-LALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD  101 (418)
T ss_dssp             TTCCHHHHHHH-HHHCC-EEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred             ccCchHHHHHH-HhcCC-EEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccchhhcC
Confidence            37899999887 68899 9998764   899999999999998754 3332221 111111         12236777 9


Q ss_pred             chHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehh-hHHHHHHHHHHHHhhcCCCCchhHHHHHHH
Q 011873          123 QDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHD-LSRKFIFALCSELMYNIHDTRTADELENLA  201 (475)
Q Consensus       123 ~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~  201 (475)
                      |+.|+++|+++++.|+++.++++.+.+.+.+.++++ . ..++++|+.. ....+++++++. +||.+... ...+....
T Consensus       102 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~-l-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~  177 (418)
T 3r9b_A          102 PPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLD-A-VDGPEFNLIDNLAYPLPVAVICR-LLGVPIED-EPKFSRAS  177 (418)
T ss_dssp             TTHHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHH-T-CCSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHHHHHH
T ss_pred             CchHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHh-h-hccCCeehHHHHhCcCCHHHHHH-HcCCCHHH-HHHHHHHH
Confidence            999999999999999999999999999999999998 4 4456899765 456899999999 79987643 23444433


Q ss_pred             HHHHhhhhhcC--cCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHH
Q 011873          202 HCIMTEFFIIP--VNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALK  279 (475)
Q Consensus       202 ~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~  279 (475)
                      ..+...+....  ..++....++..++.+.+.+++.+.++++++       ...+|+++.+++... ++..++++++..+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~-~~~~ls~~ei~~~  249 (418)
T 3r9b_A          178 ALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRR-------TPGEDLMSGLVAVEE-SGDQLTEDEIIAT  249 (418)
T ss_dssp             HHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTT-------SCCSSHHHHHHHHHH-HSSSCCHHHHHHH
T ss_pred             HHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCccHHHHHHHhhh-ccCCCCHHHHHHH
Confidence            33322221111  1223334456667778888888888887764       346799999997643 3445999999999


Q ss_pred             HHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccc
Q 011873          280 MQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFR  359 (475)
Q Consensus       280 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r  359 (475)
                      +..+++||+|||+++++|++++|++||++|+|+++|++                     |++|||+|+||++||++.+.|
T Consensus       250 ~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R  308 (418)
T 3r9b_A          250 CNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS---------------------RASAVIEETMRYDPPVQLVSR  308 (418)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG---------------------GHHHHHHHHHHHSCSBCCEEE
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------hHHHHHHHHHHhCCcccccee
Confidence            99999999999999999999999999999999999853                     789999999999999998889


Q ss_pred             ccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHH
Q 011873          360 EALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHN  439 (475)
Q Consensus       360 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~  439 (475)
                      .+++|++|+||.||||+.|.++.+++|+||++|+||++|+|||      .+..++|||+|+|.|+|++||.+|++++++.
T Consensus       309 ~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R------~~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~  382 (418)
T 3r9b_A          309 YAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR------AQIRHLGFGKGAHFCLGAPLARLEATVALPA  382 (418)
T ss_dssp             EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGCCTTHHHHHHHHHHHHHH
T ss_pred             EeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCC------CCCCCcCCCCcCccCccHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      3457899999999999999999999999999


Q ss_pred             HHhcc-eEEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          440 LVRKF-RWEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       440 ll~~f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |+++| ++++.++ .....+...++..+++|+++||+
T Consensus       383 ll~~f~~~~l~~~-~~~~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          383 LAARFPEARLSGE-PEYKRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             HHHHCTTCEECSC-CEECSCSSBCCEEECEEEC----
T ss_pred             HHHhCccceeCCC-CccccCCcccCcceeEEEecCCC
Confidence            99999 8998754 44556678889999999999985


No 55 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.1e-61  Score=463.78  Aligned_cols=391  Identities=16%  Similarity=0.192  Sum_probs=304.9

Q ss_pred             CCCCCCCCCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeec--------cCCCcEEEecCcccchhhhccCCc
Q 011873           29 TQNLPPGRKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTS--------YLGADMVFLCSAEGNKLLFSNEHK  100 (475)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~--------~~~~~~vvv~~p~~~~~i~~~~~~  100 (475)
                      ....||+|..+++++......     .+++.++.++ ++||| ||++.        +|+.++++|++++.++++++++. 
T Consensus        16 ~~~~p~~~~~~~~~~~~~~~~-----~~p~~~~~~l-r~~gP-v~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~-   87 (433)
T 3ivy_A           16 TVPSPNLPPGFDFTDPAIYAE-----RLPVAEFAEL-RSAAP-IWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSD-   87 (433)
T ss_dssp             ----CCCCTTCCTTCHHHHTT-----CCCHHHHHHH-HHHCS-EEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTT-
T ss_pred             ccCCCCCCCCCCCCCHHHhhc-----CCccHHHHHH-HhcCC-EEecccccccccccCCCCEEEEecHHHHHHHHcChh-
Confidence            345677777787776444322     5689999988 88999 99998        44478999999999999997663 


Q ss_pred             ccccCchhh-----------hhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEE
Q 011873          101 LFKPWLPRI-----------IENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVK  168 (475)
Q Consensus       101 ~~~~~~~~~-----------~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd  168 (475)
                      .|++.....           .....+ .+++. +|+.|+++|+++++.|++..++++.+.+.+.+.+++++ +..++++|
T Consensus        88 ~fs~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~~~~d  165 (433)
T 3ivy_A           88 VFSSYENGVIPRFKNDIAREDIEVQR-FVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAE-AAAAGSGD  165 (433)
T ss_dssp             TEESTTTCSCCCCCTTCCHHHHHGGG-GSGGGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHH-HHHHCEEE
T ss_pred             hccCCccccccccccccccccccccc-CCccccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-HhhCCCee
Confidence            444322111           111223 36667 99999999999999999999999999999999999986 44456899


Q ss_pred             ehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhh
Q 011873          169 VHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEE  247 (475)
Q Consensus       169 ~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  247 (475)
                      +...+ ..+++++++.+ ||.+..+ .    ..+..+...+..  ...|.....+..++.+.+.+++.++++++++    
T Consensus       166 ~~~~~~~~~~~~vi~~l-~G~~~~~-~----~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~----  233 (433)
T 3ivy_A          166 FVEQVSCELPLQAIAGL-LGVPQED-R----GKLFHWSNEMTG--NEDPEYAHIDPKASSAELIGYAMKMAEEKAK----  233 (433)
T ss_dssp             HHHHTTSHHHHHHHHHH-HTCCHHH-H----HHHHHHHTTCSC--CCCGGGTTCCHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHH-cCCCHHH-H----HHHHHHHHHHhc--cCCchhhhHHHHHHHHHHHHHHHHHHHHHhc----
Confidence            98887 99999999996 9965321 1    222222222221  1122222224567778888899999888765    


Q ss_pred             ccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCC
Q 011873          248 KREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDE  327 (475)
Q Consensus       248 ~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~  327 (475)
                         ...+|+++.+++... ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++          
T Consensus       234 ---~~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------  299 (433)
T 3ivy_A          234 ---NPADDIVTQLIQADI-DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP----------  299 (433)
T ss_dssp             --------CHHHHHSCC---CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC----------
T ss_pred             ---CCCCcHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc----------
Confidence               345699999997643 344699999999999999999999999999999999999999999999964          


Q ss_pred             CCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC
Q 011873          328 LLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND  407 (475)
Q Consensus       328 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~  407 (475)
                                   +|||+|+||++||++.++|.+++|++|+||.||||+.|.++.+++||||++|+||++|+||||.   
T Consensus       300 -------------~a~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~---  363 (433)
T 3ivy_A          300 -------------ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNP---  363 (433)
T ss_dssp             -------------TTHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS---
T ss_pred             -------------cchhHHHhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCC---
Confidence                         4899999999999998899999999999999999999999999999999999999999999984   


Q ss_pred             CCCCcccccC-CCCCCCccHHHHHHHHHHHHHHHHhcce-EEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          408 IVPFSYVPFG-AGPHICPGKEFARLKLLVFFHNLVRKFR-WEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       408 ~~~~~~~~Fg-~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                         ..|+||| +|+|.|+|++||.+|++++++.|+++|+ +++.+++. ...+........++|++++|.
T Consensus       364 ---~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~g~~~lpv~~~~R~  429 (433)
T 3ivy_A          364 ---NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE-RLRSGWLNGIKHWQVDYTGRC  429 (433)
T ss_dssp             ---CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE-ECCCSSBCCEEECEEESCC--
T ss_pred             ---CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc-eeccCcccCcceeEEEEeccc
Confidence               3589999 9999999999999999999999999999 99975433 334455666668999999884


No 56 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.9e-61  Score=458.95  Aligned_cols=371  Identities=20%  Similarity=0.272  Sum_probs=303.6

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCc---hhh----hh---hhc---C-CCCC
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWL---PRI----IE---NSF---K-SSPN  119 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~---~~~----~~---~~~---g-~~~~  119 (475)
                      .+++.++.++ ++||+ +|++++ ++.+.++|+||+++++++.+++  +.+..   ...    ..   .++   + ..++
T Consensus        17 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (411)
T 1gwi_A           17 TDLDGESARL-RAAGP-LAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSM   92 (411)
T ss_dssp             SCHHHHHHHH-HHTCS-EEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred             CChHHHHHHH-HHhCC-eeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccccc
Confidence            6788899999 99999 999997 7889999999999999998764  22221   110    00   010   2 3366


Q ss_pred             CC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhc-CCCcEEehhhHH-HHHHHHHHHHhhcCCCCchhHH
Q 011873          120 IT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWD-GNDVVKVHDLSR-KFIFALCSELMYNIHDTRTADE  196 (475)
Q Consensus       120 ~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~  196 (475)
                      ++ +|+.|+++|+++++.|+...++++.+.+.+.+.+++++ +. .++++|+.+++. .+++++++. +||.+..+ .++
T Consensus        93 ~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~  169 (411)
T 1gwi_A           93 LTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDE-LPADGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR-LPR  169 (411)
T ss_dssp             GGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHT-SCCSCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHH
T ss_pred             ccCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcchHHHHhhHHHHHHHHH-HhCCCHHH-HHH
Confidence            67 99999999999999999999999999999999999986 44 567899988776 599999996 69986543 233


Q ss_pred             HHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHH
Q 011873          197 LENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEI  276 (475)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i  276 (475)
                      +......+..    ..  .   ...+..++.+.+.+++.++++++++       ....|+++.+++..+ ++..++++++
T Consensus       170 ~~~~~~~~~~----~~--~---~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~-~~~~l~~~~i  232 (411)
T 1gwi_A          170 LKVLFEKFFS----TQ--T---PPEEVVATLTELASIMTDTVAAKRA-------APGDDLTSALIQASE-NGDHLTDAEI  232 (411)
T ss_dssp             HHHHHHHHHC----TT--S---CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCCB-TTBCCCHHHH
T ss_pred             HHHHHHHHhc----cC--C---ChHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhcc-cCCCCCHHHH
Confidence            4433333222    10  1   1244566777888899999988765       234789999997653 3445999999


Q ss_pred             HHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-
Q 011873          277 ALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-  355 (475)
Q Consensus       277 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-  355 (475)
                      .+++..+++||+|||+++++|++++|++||++|+||++|+                     +|++|||+|+||++||++ 
T Consensus       233 ~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~  291 (411)
T 1gwi_A          233 VSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE---------------------AEWSAVVEETLRFSTPTSH  291 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS---------------------SCHHHHHHHHHHHSCSBCC
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh---------------------HHHHHHHHHHHHhCCcccC
Confidence            9999999999999999999999999999999999999752                     479999999999999998 


Q ss_pred             ccccccccccccCceEeCCCCEEEEeccccccCCCCC-CCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHH
Q 011873          356 GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECF-PNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLL  434 (475)
Q Consensus       356 ~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~  434 (475)
                      +++|.+.+|++++||.||||+.|.++.+++|+||++| +||++|+||||.+     ..++|||+|+|.|+|++||++|++
T Consensus       292 ~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~-----~~~lpFG~G~r~C~G~~lA~~e~~  366 (411)
T 1gwi_A          292 VLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG-----NRHISFGHGPHVCPGAALSRMEAG  366 (411)
T ss_dssp             EEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS-----SCCCTTCCSTTCCTTHHHHHHHHH
T ss_pred             CceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC-----CCcccCCCCcccCCCHHHHHHHHH
Confidence            5889999999999999999999999999999999999 9999999999953     578999999999999999999999


Q ss_pred             HHHHHHHhcc-eEEEecCCccc--ccCccCCCCCCcceEeeeCC
Q 011873          435 VFFHNLVRKF-RWEKIIPDEKM--IRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       435 ~~la~ll~~f-~~~~~~~~~~~--~~~~~~~p~~~~~v~~~~r~  475 (475)
                      ++++.|+++| ++++..+....  ....+.++..+++|++++|.
T Consensus       367 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          367 VALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             HHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred             HHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence            9999999999 79997543322  33456788899999999983


No 57 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=5.8e-61  Score=455.13  Aligned_cols=368  Identities=21%  Similarity=0.267  Sum_probs=302.2

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch---h----------hh-hh---hcCCC
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP---R----------II-EN---SFKSS  117 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~---~----------~~-~~---~~g~~  117 (475)
                      .+++.++.++ ++||+ +|++++++.+.+++++++.+++++.++  .|++...   .          .+ ..   ..+. 
T Consensus        14 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   88 (404)
T 1z8o_A           14 VDWYRTYAEL-RETAP-VTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT-   88 (404)
T ss_dssp             SSHHHHHHHH-HHHCS-EEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS-
T ss_pred             cCcHHHHHHH-HhcCC-eeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc-
Confidence            6789999999 99999 999999888899999999999999876  2433211   1          11 11   1343 


Q ss_pred             CCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhH
Q 011873          118 PNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTAD  195 (475)
Q Consensus       118 ~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~  195 (475)
                      +++. +|+.|+++|+++++.|+...++++.+.+.+.+.++++. +..++++|+...+ ..+++++++.+ ||.+..+ ..
T Consensus        89 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~  165 (404)
T 1z8o_A           89 NMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDE-VGDSGVVDIVDRFAHPLPIKVICEL-LGVDEKY-RG  165 (404)
T ss_dssp             SGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHT-SCSSSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-TT
T ss_pred             ccccCCCcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh-hhhcCCcchHHHHhHHHHHHHHHHH-hCCCHHH-HH
Confidence            6777 99999999999999999999999999999999999986 5556789998654 68999999985 9986543 23


Q ss_pred             HHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHH
Q 011873          196 ELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESE  275 (475)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~  275 (475)
                      ++......+.. .     ..|.  .++..++.+.+.+++.+.++++++       ...+|+++.+++....++..+++++
T Consensus       166 ~~~~~~~~~~~-~-----~~p~--~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~~~~~~l~~~e  230 (404)
T 1z8o_A          166 EFGRWSSEILV-M-----DPER--AEQRGQAAREVVNFILDLVERRRT-------EPGDDLLSALIRVQDDDDGRLSADE  230 (404)
T ss_dssp             THHHHHHHHHC-C-----CGGG--HHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCEETTTEECCHHH
T ss_pred             HHHHHHHHHhc-c-----CChh--HHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhhhcccCCCCCHHH
Confidence            34433333322 1     1121  345566777888889999988775       2346899999976222344589999


Q ss_pred             HHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC
Q 011873          276 IALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS  355 (475)
Q Consensus       276 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  355 (475)
                      +..++..+++||+|||+++++|++++|++||++|+||++|+                     .||+|||+|+||++||++
T Consensus       231 i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~  289 (404)
T 1z8o_A          231 LTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP---------------------SALPNAVEEILRYIAPPE  289 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHTCSSC
T ss_pred             HHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HhHHHHHHHHHHhcCCcc
Confidence            99999999999999999999999999999999999999874                     279999999999999999


Q ss_pred             ccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHH
Q 011873          356 GTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLV  435 (475)
Q Consensus       356 ~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~  435 (475)
                      .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|++||.+|+++
T Consensus       290 ~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~  363 (404)
T 1z8o_A          290 TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT------RGHLSFGQGIHFCMGRPLAKLEGEV  363 (404)
T ss_dssp             CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCSSTTCCTTHHHHHHHHHH
T ss_pred             CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC------CCccCCCCCCccCCcHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999984      3689999999999999999999999


Q ss_pred             HHHHHHhcc-eEEEecCCc--ccccCccCCCCCCcceEee
Q 011873          436 FFHNLVRKF-RWEKIIPDE--KMIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       436 ~la~ll~~f-~~~~~~~~~--~~~~~~~~~p~~~~~v~~~  472 (475)
                      +++.|+++| ++++.+++.  .+..+.+.++..+++|+++
T Consensus       364 ~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~~  403 (404)
T 1z8o_A          364 ALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRLD  403 (404)
T ss_dssp             HHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEETT
T ss_pred             HHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEeC
Confidence            999999999 599975432  2334567788888998863


No 58 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=1.1e-60  Score=453.84  Aligned_cols=367  Identities=18%  Similarity=0.249  Sum_probs=298.8

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCch--hh---hhhhcCCCCCCC-CchHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWLP--RI---IENSFKSSPNIT-LQDEFN  127 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~--~~---~~~~~g~~~~~~-~~~~~~  127 (475)
                      .+++.++.++ ++||+ +|++++ ++.+.++|+|++.+++++.++.  |.+...  ..   +....+..+++. +|+.|+
T Consensus        37 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~i~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  112 (417)
T 2y5n_A           37 LTLAGRYGEL-QETEP-VSRVRPPYGEEAWLVTRYEDVRAVLGDGR--FVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS  112 (417)
T ss_dssp             CCCCHHHHHH-HHHCS-EEEEECSBSCCEEEECSHHHHHHHHTCTT--EESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred             cCchHHHHHH-HhcCC-eEeeccCCCceEEEECCHHHHHHHHcCCC--cccCccccccccccCcccccccCccCCchHHH
Confidence            6788999999 89999 999997 7899999999999999998753  332211  11   112223346777 999999


Q ss_pred             HHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCC-cEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHH
Q 011873          128 SLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGND-VVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCIM  205 (475)
Q Consensus       128 ~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  205 (475)
                      ++|+++++.|+...++++.+.+.+.+.++++++. .++ ++|+..++ ..+++++++. +||.+..+ .+++..    +.
T Consensus       113 ~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~-~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~----~~  185 (417)
T 2y5n_A          113 RLRRLVVKAFTARRAESLRPRAREIAHELVDQMA-ATGQPADLVAMFARQLPVRVICE-LLGVPSAD-HDRFTR----WS  185 (417)
T ss_dssp             HHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHH-HHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-HHHHHH----HH
T ss_pred             HHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHH-hCCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH-HHHHHH----HH
Confidence            9999999999999999999999999999998643 344 89998766 4699999998 59986543 222222    22


Q ss_pred             hhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHH
Q 011873          206 TEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLI  285 (475)
Q Consensus       206 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~  285 (475)
                      ..+.... ..   ..++..++.+.+.+++.++++++++       ...+|+++.+++... ++..++++++..++..+++
T Consensus       186 ~~~~~~~-~~---~~~~~~~~~~~l~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~  253 (417)
T 2y5n_A          186 GAFLSTA-EV---TAEEMQEAAEQAYAYMGDLIDRRRK-------EPTDDLVSALVQARD-QQDSLSEQELLDLAIGLLV  253 (417)
T ss_dssp             HTTSTTC-CC---CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHH
T ss_pred             HHHhccc-CC---CHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHH
Confidence            2222211 11   1245566777888899999988775       234699999997653 3445999999999999999


Q ss_pred             hcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC--cccccccc
Q 011873          286 GAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS--GTFREALT  363 (475)
Q Consensus       286 ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~~r~~~~  363 (475)
                      ||+|||+++++|++++|++||++|+|+++|+                     .||+|||+|+||++||++  .++|.+.+
T Consensus       254 AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~  312 (417)
T 2y5n_A          254 AGYESTTTQIADFVYLLMTRPELRRQLLDRP---------------------ELIPSAVEELTRWVPLGVGTAFPRYAVE  312 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHCCCBSSCCSCEEESS
T ss_pred             HhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHHhcCCccccccceEeCC
Confidence            9999999999999999999999999999874                     279999999999999999  78999999


Q ss_pred             ccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011873          364 EVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       364 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      |++|+||.||||+.|.++.+++|+||++|+||++|+||||.      ..++|||+|+|.|+|++||++|++++++.|+++
T Consensus       313 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~  386 (417)
T 2y5n_A          313 DVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQR  386 (417)
T ss_dssp             CEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999983      468999999999999999999999999999999


Q ss_pred             c-eEEEecCCcc--cccCccCCCCCCcceEe
Q 011873          444 F-RWEKIIPDEK--MIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       444 f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~  471 (475)
                      | ++++.+++..  ...+.+.+....++|++
T Consensus       387 f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          387 LPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             CTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             CCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            9 5999754333  33455677778888864


No 59 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=6e-61  Score=457.57  Aligned_cols=374  Identities=15%  Similarity=0.191  Sum_probs=302.6

Q ss_pred             CChhHHHHHHHHhhc-CcceeeccCCCcEEEecCcccchhhhccCCcccccCch---hhhhhhcCCCCCCC-CchHHHHH
Q 011873           55 GCIEKFMSQRMQKYS-SKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP---RIIENSFKSSPNIT-LQDEFNSL  129 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~---~~~~~~~g~~~~~~-~~~~~~~~  129 (475)
                      .+++.++.++++++| + ||++..++ +.++|+|++.+++++++.+ .|++...   .......+ .+++. +|+.|+++
T Consensus        38 ~dp~~~~~~lr~~~G~p-v~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~-~~~~~~dg~~h~~~  113 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPP-LVWTPFTG-GHWIATRGTLIDEIYRSPE-RFSSRVIWVPREAGEAYD-MVPTKLDPPEHTPY  113 (421)
T ss_dssp             GCHHHHHHHHCCTTCCS-EEEESSTT-SEEEECSHHHHHHHHTCTT-TEETTCCSSSHHHHHHCC-CTTTTCCTTTHHHH
T ss_pred             cChhHHHHHHHhcCCCC-eEeccCCC-CeEEEcCHHHHHHHHcChh-hccCCcccCCcccccccc-cCCccCCcHHHHHH
Confidence            689999998877655 7 99998765 5899999999999996654 4543321   11112222 35666 99999999


Q ss_pred             HHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhh
Q 011873          130 RRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCIMTEF  208 (475)
Q Consensus       130 R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~  208 (475)
                      |+++++.|+...++++.+.+.+.+.++++. +..++++|+...+ ..++.++++.+ ||.+..+ ..++......+    
T Consensus       114 R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~d~~~~~~~~~~~~v~~~~-~G~~~~~-~~~~~~~~~~~----  186 (421)
T 3lxh_A          114 RKAIDKGLNLAEIRKLEDQIRTIAVEIIEG-FADRGHCEFGSEFSTVFPVRVFLAL-AGLPVED-ATKLGLLANEM----  186 (421)
T ss_dssp             HHHHHHHHSHHHHHTTHHHHHHHHHHHHHT-TTTTSEEEHHHHTTTTHHHHHHHHH-HTCCGGG-HHHHHHHHHHH----
T ss_pred             HHHHhhhcCHHHHHHHHHHHHHHHHHHHHH-HhhcCCeehHHHHHHHHHHHHHHHH-cCCCHHH-HHHHHHHHHHH----
Confidence            999999999999999999999999999996 5556688975554 56777777764 8976543 23333333332    


Q ss_pred             hhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcc
Q 011873          209 FIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAY  288 (475)
Q Consensus       209 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~  288 (475)
                      .....++|.....+..++.+.+.+++.++++++++       ...+|+++.+++... ++..++++++..++..+++||+
T Consensus       187 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~~l~~~ei~~~~~~l~~AG~  258 (421)
T 3lxh_A          187 TRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRG-------GSGTDLITRILNVEI-DGKPMPDDRALGLVSLLLLGGL  258 (421)
T ss_dssp             HSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------CCCCSHHHHHHTSCB-TTBCCCHHHHHHHHHHHHHHHH
T ss_pred             hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHhH
Confidence            22222344433566677788888999999988765       346799999998654 4446999999999999999999


Q ss_pred             cChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccC
Q 011873          289 DNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTID  368 (475)
Q Consensus       289 ~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~  368 (475)
                      |||+++++|++++|++||++|+||++|++                     |++|||+|+||++||+ .++|.+++|++|+
T Consensus       259 eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~l~  316 (421)
T 3lxh_A          259 DTVVNFLGFMMIYLSRHPETVAEMRREPL---------------------KLQRGVEELFRRFAVV-SDARYVVSDMEFH  316 (421)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHCHH---------------------HHHHHHHHHHHHCCCB-EEEEEECSCEEET
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhcCcc-CCceeeCCCeeEC
Confidence            99999999999999999999999999976                     7889999999999999 8899999999999


Q ss_pred             ceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEE
Q 011873          369 GYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RWE  447 (475)
Q Consensus       369 g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~  447 (475)
                      ||.||||+.|.++.+++||||++|+||++|+||||      +..|+|||+|+|.|+|++||.+|++++++.|+++| +++
T Consensus       317 G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~  390 (421)
T 3lxh_A          317 GTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFR  390 (421)
T ss_dssp             TEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred             CEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcE
Confidence            99999999999999999999999999999999994      46799999999999999999999999999999999 999


Q ss_pred             EecCCcccccCccCCCCCCcceEeeeCC
Q 011873          448 KIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       448 ~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      +.++..........+....++|+++||.
T Consensus       391 l~~~~~~~~~~~~~~~~~~lpv~~~p~~  418 (421)
T 3lxh_A          391 LKDRAVPIYHSGIVAAVENIPLEWEPQR  418 (421)
T ss_dssp             ECTTCCCEEECSSBCEEECCEEECCCC-
T ss_pred             ECCCCCceeccccccCceeeeEEEeccc
Confidence            9755432222334555567999999874


No 60 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=2.2e-60  Score=449.49  Aligned_cols=361  Identities=20%  Similarity=0.248  Sum_probs=295.6

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCc-hh-hhhhhcCCCC--CCC-Cc-----
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWL-PR-IIENSFKSSP--NIT-LQ-----  123 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-~~-~~~~~~g~~~--~~~-~~-----  123 (475)
                      .+++.++.++ ++||+ +|++++ ++.+.++|+||+.+++++.++.  |.+.. .. .+....+..+  +++ +|     
T Consensus        26 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  101 (404)
T 2xbk_A           26 LKLSPLLRAL-QDRGP-IHRVRTPAGDEAWLVTRHAELKQLLHDER--IGRTHPDPPSAAQYVRSPFLDLLISDADAESG  101 (404)
T ss_dssp             TBCCHHHHHH-HHHCS-EEEEECTTSCEEEEECSHHHHHHHTTCTT--EESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred             cCccHHHHHH-HhhCC-EeeeccCCCceEEEEcCHHHHHHHHcCCC--CCCCccccccCCcccccccccceeeCCCCCCC
Confidence            6788889999 89999 999997 7889999999999999998753  33221 11 1222212224  667 89     


Q ss_pred             -hHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHH
Q 011873          124 -DEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLA  201 (475)
Q Consensus       124 -~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  201 (475)
                       +.|+++|+++++.|+..+++++.+.+.+.+.++++++..+++++|+..++ ..+++++++. +||.+..+ .+++....
T Consensus       102 ~~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~  179 (404)
T 2xbk_A          102 RRQHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCE-VIGVPPQR-RAELTTLL  179 (404)
T ss_dssp             HHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-HHHHHHHH
T ss_pred             CchHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-HHHHHHHH
Confidence             99999999999999999999999999999999998754556689998665 5689999997 69987543 23333333


Q ss_pred             HHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHH
Q 011873          202 HCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQ  281 (475)
Q Consensus       202 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~  281 (475)
                      ..+    ....    ...  +..++.+.+.+++.+++++++++       ..+|+++.+ +    ++ .++++++..++.
T Consensus       180 ~~~----~~~~----~~p--~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~l-~----~~-~ls~~ei~~~~~  236 (404)
T 2xbk_A          180 AGI----AKLD----DRE--GAVRAQDDLFGYVAGLVEHKRAE-------PGPDIISRL-N----DG-ELTEDRVAHLAM  236 (404)
T ss_dssp             HHH----TBSS----CHH--HHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH-H----SS-SCCHHHHHHHHH
T ss_pred             HHH----Hhcc----CcH--HHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHh-h----cC-CCCHHHHHHHHH
Confidence            322    2111    111  45567778888999999887752       346899888 2    23 599999999999


Q ss_pred             HHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC--cccc
Q 011873          282 AVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS--GTFR  359 (475)
Q Consensus       282 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~~r  359 (475)
                      .+++||+|||+++++|++++|++||++|+|+++|++                     ||+|||+|+||++||++  .++|
T Consensus       237 ~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R  295 (404)
T 2xbk_A          237 GLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD---------------------VMARAVEEVLRTARAGGSVLPPR  295 (404)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH---------------------HHHHHHHHHHHHSCSSCCBCSCE
T ss_pred             HHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCCccccccce
Confidence            999999999999999999999999999999999864                     68999999999999999  7899


Q ss_pred             ccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHH
Q 011873          360 EALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHN  439 (475)
Q Consensus       360 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~  439 (475)
                      .+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.      ..++|||+|+|.|+|+++|++|++++++.
T Consensus       296 ~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~lpFG~G~r~C~G~~lA~~e~~~~la~  369 (404)
T 2xbk_A          296 YASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------NPHLTFGHGIWHCIGAPLARLELRTMFTK  369 (404)
T ss_dssp             EESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS------CCCCTTEETTEECTTHHHHHHHHHHHHHH
T ss_pred             eECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC------CCCCCCCCCCcCCCcHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999984      46899999999999999999999999999


Q ss_pred             HHhcc-eEEEecCCcc--cccCccCCCCCCcceEe
Q 011873          440 LVRKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       440 ll~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~  471 (475)
                      |+++| ++++.+++..  +..+.+.++..+++|++
T Consensus       370 ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          370 LFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             HHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             HHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            99999 7999765333  33455677888888864


No 61 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=8.7e-61  Score=453.48  Aligned_cols=366  Identities=15%  Similarity=0.158  Sum_probs=297.5

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh---hhhhhcCCCCCCC-CchHHHHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR---IIENSFKSSPNIT-LQDEFNSLR  130 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~---~~~~~~g~~~~~~-~~~~~~~~R  130 (475)
                      .+++.++.+++++ |+ ||++..++ +.++|+||+.+++++++.+ .|++....   ......+ .+++. +|+.|+++|
T Consensus        24 ~~p~~~~~~l~~~-Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~-~~~~~~~g~~h~~~R   98 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PG-LVWSTANG-GHWIAARGDVVRELWGDAE-RLSSQCLAVTPGLGKVMQ-FIPLQQDGAEHKAFR   98 (396)
T ss_dssp             TCHHHHHHGGGGS-CS-EEEECSTT-SEEEECSHHHHHHHHHCTT-TEESTTCCSSTTHHHHHC-CTTTTCCHHHHHHHH
T ss_pred             cChHHHHHHHHhc-CC-eeeecCCC-CEEEEcCHHHHHHHHcCcc-cccCCcccCCCccccccc-cCccccCCcHHHHHH
Confidence            7899999999998 99 99998764 5889999999999997664 44433211   1111122 25566 999999999


Q ss_pred             HHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhh
Q 011873          131 RVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCIMTEFF  209 (475)
Q Consensus       131 ~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~  209 (475)
                      +++++.|+...++++.+.+.+.+.+++++ +..++++|+...+ ..++.++++. +||.+..+ ..++......+..   
T Consensus        99 ~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-~~~~~~~~~~~~~---  172 (396)
T 3oft_A           99 TPVMKGLASRFVVALEPKVQAVARKLMES-LRPRGSCDFVSDFAEILPLNIFLT-LIDVPLED-RPRLRQLGVQLTR---  172 (396)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHH-HGGGSEEEHHHHTTTTHHHHHHHH-HTTCCGGG-HHHHHHHHHHHHS---
T ss_pred             HHhhhhhCHHHHHHHHHHHHHHHHHHHHH-hhhcCCccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHhC---
Confidence            99999999999999999999999999996 5445678886555 5577777766 58976543 2333333332211   


Q ss_pred             hcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhccc
Q 011873          210 IIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYD  289 (475)
Q Consensus       210 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~  289 (475)
                             .....+..++.+.+.+++.+.++++++       ...+|+++.+++... ++..++++++..++..+++||+|
T Consensus       173 -------~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~-~~~~l~~~el~~~~~~l~~AG~d  237 (396)
T 3oft_A          173 -------PDGSMTVEQLKQAADDYLWPFIEKRMA-------QPGDDLFSRILSEPV-GGRPWTVDEARRMCRNLLFGGLD  237 (396)
T ss_dssp             -------CCSSCCHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHTSCB-TTBCCCHHHHHHHHHHHHHHHHH
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhH
Confidence                   011345667788899999999998876       346799999998654 44469999999999999999999


Q ss_pred             ChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCc
Q 011873          290 NPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDG  369 (475)
Q Consensus       290 tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g  369 (475)
                      ||+++++|++++|++||++|+|+++|++                     |++|||+|+||++||+ .++|.+.+|++++|
T Consensus       238 Tta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~~~g  295 (396)
T 3oft_A          238 TVAAMIGMVALHLARHPEDQRLLRERPD---------------------LIPAAADELMRRYPTV-AVSRNAVADVDADG  295 (396)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHCCCB-EEEEEESSCEEETT
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------hHHHHHHHHHHhcCcc-cCceecCCCEEECC
Confidence            9999999999999999999999999864                     7899999999999999 88999999999999


Q ss_pred             eEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEEE
Q 011873          370 YTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RWEK  448 (475)
Q Consensus       370 ~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~  448 (475)
                      |.||||+.|.++.+++||||++|+||++|+||||++    +..|+|||+|+|.|+|++||.+|++++++.|+++| ++++
T Consensus       296 ~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~----~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l  371 (396)
T 3oft_A          296 VTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA----PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFAL  371 (396)
T ss_dssp             EEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC----GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred             EEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC----CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceE
Confidence            999999999999999999999999999999999975    47899999999999999999999999999999999 9999


Q ss_pred             ecCCcccccCccCCCCCCcceEee
Q 011873          449 IIPDEKMIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       449 ~~~~~~~~~~~~~~p~~~~~v~~~  472 (475)
                      .++..........+....++|++.
T Consensus       372 ~~~~~~~~~~~~~~~~~~lpv~~~  395 (396)
T 3oft_A          372 APDKAVTMKGGNVGACTALPLVWR  395 (396)
T ss_dssp             CSSSCCEEECSSBCEEEECEEEEC
T ss_pred             CCCCCceeccccccCcccceEEeC
Confidence            855432222334555556777764


No 62 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=1.8e-60  Score=454.90  Aligned_cols=373  Identities=17%  Similarity=0.217  Sum_probs=303.8

Q ss_pred             CChhHHHHHHHHhhcCcceeeccC-------CCcEEEecCcccchhhhccCCcccccCc----hhhhhhh--cCCCCCCC
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYL-------GADMVFLCSAEGNKLLFSNEHKLFKPWL----PRIIENS--FKSSPNIT  121 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~-------~~~~vvv~~p~~~~~i~~~~~~~~~~~~----~~~~~~~--~g~~~~~~  121 (475)
                      .+++.++.++. +||+ ||++.++       +.++++|+||+.+++++.+++ .|++..    ......+  .|. +++.
T Consensus        44 ~~p~~~~~~l~-~~Gp-v~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~-~l~~  119 (435)
T 2wm5_A           44 DVRDGAFATLR-REAP-ISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPD-IFSSYPNITINDQTPELAEYFG-SMIV  119 (435)
T ss_dssp             HHHHHHHHHHH-HHCS-EEEECCCCC---CCCCCEEEECSHHHHHHHHHCTT-TEECSSCCSSSCCCHHHHHHHH-GGGG
T ss_pred             CChhHHHHHHH-hcCC-eEecccccccccCCCCCeEEEcCHHHHHHHHcCcc-cccCccccccCccccchhhhcc-cccc
Confidence            35788888885 7999 9999986       678999999999999998764 454332    1111111  132 5666


Q ss_pred             -CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcC--CCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHH
Q 011873          122 -LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDG--NDVVKVHDLS-RKFIFALCSELMYNIHDTRTADEL  197 (475)
Q Consensus       122 -~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~--~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~  197 (475)
                       +|+.|+++|+++++.|+...++.+.+.+.+.+.++++.+...  ++++|+.+++ ..+++++++.+ ||.+.++ .+++
T Consensus       120 ~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~  197 (435)
T 2wm5_A          120 LDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD-HQRI  197 (435)
T ss_dssp             CCTTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHH
T ss_pred             CCcHHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH-HHHH
Confidence             999999999999999999999999999999999999864332  3489998765 78999999999 9987653 2344


Q ss_pred             HHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHH
Q 011873          198 ENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIA  277 (475)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~  277 (475)
                      ......+....  .|.+.+  .+++..++.+.+.+++.++++++++       ....|+++.+++... ++..++++++.
T Consensus       198 ~~~~~~~~~~~--~p~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~~ls~~ei~  265 (435)
T 2wm5_A          198 FHWTNVILGFG--DPDLAT--DFDEFMQVSADIGAYATALAEDRRV-------NHHDDLTSSLVEAEV-DGERLSSREIA  265 (435)
T ss_dssp             HHHHHHHHHTT--CTTSCC--CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHCCB-TTBCCCHHHHH
T ss_pred             HHHHHHHhccC--Ccchhh--hHHHHHHHHHHHHHHHHHHHHHHhc-------CCCCCHHHHHHhhhc-cCCCCCHHHHH
Confidence            44444333221  132222  2345667778888999999988875       235799999997643 34459999999


Q ss_pred             HHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcc
Q 011873          278 LKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGT  357 (475)
Q Consensus       278 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  357 (475)
                      .++..+++||+|||+++++|++++|++||++|+|+++|++                    +||+|||+|+||++||++++
T Consensus       266 ~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~~l~a~i~E~lRl~p~~~~~  325 (435)
T 2wm5_A          266 SFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD--------------------GLAPTAVEEIVRWASPVVYM  325 (435)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH--------------------HHHHHHHHHHHHHHCSBCCE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH--------------------hHHHHHHHHHHhhcCcccCc
Confidence            9999999999999999999999999999999999999975                    37899999999999999988


Q ss_pred             ccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCC-CCCCCccHHHHHHHHHHH
Q 011873          358 FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGA-GPHICPGKEFARLKLLVF  436 (475)
Q Consensus       358 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~-G~r~C~G~~~a~~~~~~~  436 (475)
                      +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||      +..++|||+ |+|.|||++||.+|++++
T Consensus       326 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~------~~~~lpFG~~G~r~C~G~~lA~~e~~~~  399 (435)
T 2wm5_A          326 RRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN------PNPHLGFGGGGAHFCLGANLARREIRVA  399 (435)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC------SCCCCTTCSSSTTCCTTHHHHHHHHHHH
T ss_pred             ceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999993      246899999 999999999999999999


Q ss_pred             HHHHHhcce-EEEecCCcccccCccCCCCCCcceEee
Q 011873          437 FHNLVRKFR-WEKIIPDEKMIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       437 la~ll~~f~-~~~~~~~~~~~~~~~~~p~~~~~v~~~  472 (475)
                      ++.|+++|+ +++.+ +..+..+.+.+....++|+++
T Consensus       400 la~ll~~f~~~~l~~-~~~~~~~~~~~~~~~lpv~~~  435 (435)
T 2wm5_A          400 FDELRRQMPDVVATE-EPARLLSQFIHGIKTLPVTWS  435 (435)
T ss_dssp             HHHHHHHCTTCEECS-CCEECCCSSBCCEEECEEECC
T ss_pred             HHHHHHhCCccEECC-CccccccccccCccceeEEeC
Confidence            999999997 99975 333445667777778888763


No 63 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=3.3e-60  Score=450.42  Aligned_cols=367  Identities=18%  Similarity=0.181  Sum_probs=297.3

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCc--hhh-----hhhhc----CCCC-CCC
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWL--PRI-----IENSF----KSSP-NIT  121 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~--~~~-----~~~~~----g~~~-~~~  121 (475)
                      .+++.++.++. +||+ +|++++ ++.++++|+||+.+++++.++  .|.+..  ...     ....+    +..+ +++
T Consensus        22 ~~p~~~~~~l~-~~Gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   97 (413)
T 2z36_A           22 FAPPAAYERLR-ERAP-INKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG   97 (413)
T ss_dssp             TBCCHHHHHHH-HHCS-EEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred             cCchHHHHHHH-HcCC-eeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccc
Confidence            67888999886 7899 999997 788999999999999999874  243321  110     11232    2336 777


Q ss_pred             -CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcC-CCcEEehhhHH-HHHHHHHHHHhhcCCCCchhHHHH
Q 011873          122 -LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDG-NDVVKVHDLSR-KFIFALCSELMYNIHDTRTADELE  198 (475)
Q Consensus       122 -~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~  198 (475)
                       +|+.|+++|+++++.|++..++++.+.+.+.+.++++.+... ++++|+...+. .+++++++.+ ||.+..+ .+.+.
T Consensus        98 ~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~  175 (413)
T 2z36_A           98 MDGAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYTD-HDFFQ  175 (413)
T ss_dssp             CCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHH
T ss_pred             cCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHHH-HHHHH
Confidence             999999999999999999999999999999999999974434 67899886554 6899999985 9986543 22222


Q ss_pred             HHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHH
Q 011873          199 NLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIAL  278 (475)
Q Consensus       199 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~  278 (475)
                          .+...+....  .|    ++..++.+.+.+++.++++++++       ...+|+++.+++... ++..++++++..
T Consensus       176 ----~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~~ls~~ei~~  237 (413)
T 2z36_A          176 ----SRTTMMVSRT--SM----EDRRRAFAELRAYIDDLITRKES-------EPGDDLFSRQIARQR-QEGTLDHAGLVS  237 (413)
T ss_dssp             ----HHHHHTTCSS--CH----HHHHHHHHHHHHHHHHHHHHHHS-------SCCSSHHHHHHHHHH-HHSCCCHHHHHH
T ss_pred             ----HHHHHHhccc--Cc----HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhhc-CCCCCCHHHHHH
Confidence                2222222111  11    44556677888888888888764       234689999997642 233599999999


Q ss_pred             HHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-cc
Q 011873          279 KMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GT  357 (475)
Q Consensus       279 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~  357 (475)
                      ++..+++||+|||+++++|++++|++||++|+|+++|+                     .|++|||+|+||++||++ ++
T Consensus       238 ~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~  296 (413)
T 2z36_A          238 LAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP---------------------GRTPMAVEELLRYFTIADGVT  296 (413)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCTTTTCE
T ss_pred             HHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------------HHHHHHHHHHHHhCCCcccce
Confidence            99999999999999999999999999999999999984                     279999999999999999 78


Q ss_pred             ccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHH
Q 011873          358 FREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFF  437 (475)
Q Consensus       358 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l  437 (475)
                      +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.      ..++|||+|+|.|||++||++|+++++
T Consensus       297 ~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l  370 (413)
T 2z36_A          297 SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA------RHHLAFGFGPHQCLGQNLARMELQIVF  370 (413)
T ss_dssp             EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC------CCCCTTCCSTTSCTTHHHHHHHHHHHH
T ss_pred             eeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC------CCCCCCCCCCccCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999984      358999999999999999999999999


Q ss_pred             HHHHhcc-eEEEecCCcc--cccCccCCCCCCcceEee
Q 011873          438 HNLVRKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       438 a~ll~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~~  472 (475)
                      +.|+++| ++++.+++..  +..+...+....++|++.
T Consensus       371 a~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          371 DTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             HHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             HHHHHhCCCccccCCcccceecccccccCcceeeEEee
Confidence            9999999 5899765333  344556676777888765


No 64 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=4e-60  Score=454.90  Aligned_cols=375  Identities=18%  Similarity=0.231  Sum_probs=299.8

Q ss_pred             hhHHHHHHHHhhcCcce--eec-cCCCcEEEecCcccchhhhccCCcccccCchhhh----------hhh------cCCC
Q 011873           57 IEKFMSQRMQKYSSKIF--KTS-YLGADMVFLCSAEGNKLLFSNEHKLFKPWLPRII----------ENS------FKSS  117 (475)
Q Consensus        57 ~~~~~~~~~~~yG~~vf--~i~-~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~----------~~~------~g~~  117 (475)
                      ++.++.++ ++||| |+  ++. +++.++++|++++.++++++++. .|++......          ...      ++. 
T Consensus        47 p~~~~~~l-r~~gP-V~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~-~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~-  122 (450)
T 3tkt_A           47 LLDRFDAL-RAEAP-VAKVVAPDDEHEPFWLVSSFDGVMKASKDNA-TFLNNPKSTVFTLRVGEMMAKAITGGSPHLVE-  122 (450)
T ss_dssp             HHHHHHHH-HHHCS-EEEECCTTCSSCCEEEECSHHHHHHHHHCTT-TEESSSSCSSCCCHHHHHHHHHHHTSCSCSSC-
T ss_pred             chHHHHHH-HhcCC-eecccccCCCCCCEEEEecHHHHHHHHhCcc-cccCCCcccccccccccccccccccccccccc-
Confidence            78888888 77999 99  988 67789999999999999998763 4543321110          011      222 


Q ss_pred             CCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhH
Q 011873          118 PNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTAD  195 (475)
Q Consensus       118 ~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~  195 (475)
                      +++. +|+.|+++|+++++.|++++++++.+.+.+.+.+++++..+.++++|+...+ ..+++++++.+ ||.+..+ ..
T Consensus       123 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-~~  200 (450)
T 3tkt_A          123 SLVQMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQI-LGVPPED-EP  200 (450)
T ss_dssp             CGGGCCTTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-HH
T ss_pred             CcccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHH-cCCChhH-HH
Confidence            5666 9999999999999999999999999999999999999754447899988777 68999999996 9976543 23


Q ss_pred             HHHHHHHHHHhhhhh----cCcCCC--CcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCC
Q 011873          196 ELENLAHCIMTEFFI----IPVNIP--GTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGE  269 (475)
Q Consensus       196 ~~~~~~~~~~~~~~~----~~~~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~  269 (475)
                      ++......+......    .+.++.  ....++..++.+.+.+++.++++++++       ...+|+++.+++... ++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~~-~~~  272 (450)
T 3tkt_A          201 KMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRR-------NPTDDVATVIANAVV-DGE  272 (450)
T ss_dssp             HHHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHTCEE-TTE
T ss_pred             HHHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHhccc-cCC
Confidence            333333332211110    011110  011244556677888888998888775       345789999997654 444


Q ss_pred             CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhc
Q 011873          270 DLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLR  349 (475)
Q Consensus       270 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  349 (475)
                      .++++++..++..+++||+|||+++++|++++|++||++|+||++|+                     +|++|||+|+||
T Consensus       273 ~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LR  331 (450)
T 3tkt_A          273 PMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR---------------------NLLPGIVEEAIR  331 (450)
T ss_dssp             ECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH---------------------HHHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999985                     389999999999


Q ss_pred             CCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHH
Q 011873          350 MEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFA  429 (475)
Q Consensus       350 l~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a  429 (475)
                      ++||++.++|.+++|++|+||.||||+.|.++.+++||||++|+||++|+||||      +..++|||+|+|.|+|++||
T Consensus       332 l~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA  405 (450)
T 3tkt_A          332 WTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRP------ANRHLAFGAGSHQCLGLHLA  405 (450)
T ss_dssp             HHCSBCEEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC------TTCSSTTCCSTTCCTTHHHH
T ss_pred             hCCCccCcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCC------CCCCCCCCCcCccCccHHHH
Confidence            999999888999999999999999999999999999999999999999999994      34689999999999999999


Q ss_pred             HHHHHHHHHHHHhcce-EEEecCCcccccCccCCCCCCcceEeee
Q 011873          430 RLKLLVFFHNLVRKFR-WEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       430 ~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      .+|++++++.|+++|+ +++. ++.....+...+....++|++++
T Consensus       406 ~~e~~~~l~~ll~~f~~~~l~-~~~~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          406 RLEMRVLLDVLLDRVDSLELA-GEPKRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             HHHHHHHHHHHHHHEEEEEES-SCCEECCCSSBCCEEECEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCceeC-CCcccccCcccCCcccceEEEec
Confidence            9999999999999998 6765 44444445566777789998875


No 65 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=8e-60  Score=449.23  Aligned_cols=349  Identities=16%  Similarity=0.199  Sum_probs=290.7

Q ss_pred             CChhHHHHHHHHhhcCcceeeccC-CCcEEEecCcccchhhhccCCcccccC-----chhhhhhh----cCCCCCCC-Cc
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYL-GADMVFLCSAEGNKLLFSNEHKLFKPW-----LPRIIENS----FKSSPNIT-LQ  123 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~-~~~~vvv~~p~~~~~i~~~~~~~~~~~-----~~~~~~~~----~g~~~~~~-~~  123 (475)
                      .+++.++.+++++ |+ ||+++++ |.++++|++++.+++++.++  .|+..     ........    .+..+++. +|
T Consensus        29 ~dp~~~~~~l~~~-Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  104 (417)
T 3tyw_A           29 FAAPAEYAALRTD-DP-VARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA  104 (417)
T ss_dssp             TSCCTHHHHHHHT-CT-EEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred             cCchHHHHHHHhh-CC-eeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence            7888999999988 99 9999986 68999999999999999876  34332     11111111    12336777 99


Q ss_pred             hHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHH
Q 011873          124 DEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAH  202 (475)
Q Consensus       124 ~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~  202 (475)
                      +.|+++|+++++.|+..+++++.+.+.+.+.++++.+...++++|+..++ ..++.++++.+ ||.+..+. ..+.....
T Consensus       105 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~~~~  182 (417)
T 3tyw_A          105 PEHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDL-EFFRDVTR  182 (417)
T ss_dssp             HHHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT-THHHHHHH
T ss_pred             cHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH-HHHHHHHH
Confidence            99999999999999999999999999999999998755566789999887 57889999987 99876532 33333322


Q ss_pred             HHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 011873          203 CIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQA  282 (475)
Q Consensus       203 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~  282 (475)
                      .+    ....   +  ...+..++.+.+.+++.++++++++       ....|+++.++....+ +..++++++..++..
T Consensus       183 ~~----~~~~---~--~~~~~~~~~~~l~~~~~~~i~~r~~-------~~~~d~l~~ll~~~~~-~~~ls~~el~~~~~~  245 (417)
T 3tyw_A          183 IS----GSRN---S--TAEQVSEALGGLFGLLGGLVAERRE-------EPRDDLISKLVTDHLV-PGNVTTEQLLSTLGI  245 (417)
T ss_dssp             HH----HSSS---S--CTTHHHHHHHHHHHHHHHHHHHHHS-------SCCSSHHHHHHHHTTT-TTSSCHHHHHHHHHH
T ss_pred             HH----hccc---C--CHHHHHHHHHHHHHHHHHHHHHHhh-------CCCCCHHHHHHHhccc-CCCCCHHHHHHHHHH
Confidence            22    1111   1  2345667778888899998888764       3457999999987544 335999999999999


Q ss_pred             HHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCc-ccccc
Q 011873          283 VLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSG-TFREA  361 (475)
Q Consensus       283 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~  361 (475)
                      +++||+|||+++++|++++|++||++|+||++|++                     ||+|||+|+||++|+++. ++|.+
T Consensus       246 l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~  304 (417)
T 3tyw_A          246 TINAGRETTTSMIALSTLLLLDRPELPAELRKDPD---------------------LMPAAVDELLRVLSVADSIPLRVA  304 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG---------------------GHHHHHHHHHHHHCSCTTCCEEEE
T ss_pred             HHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------HHHHHHHHHHHhccccccCceeEe
Confidence            99999999999999999999999999999999843                     799999999999999996 68999


Q ss_pred             ccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHH
Q 011873          362 LTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLV  441 (475)
Q Consensus       362 ~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll  441 (475)
                      .+|++++||.||||+.|.++.+++|+||++|+||++|+||||.      ..|+|||+|+|.|+|++||.+|++++++.|+
T Consensus       305 ~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll  378 (417)
T 3tyw_A          305 AEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD------NHHVAFGYGVHQCVGQHLARLELEVALETLL  378 (417)
T ss_dssp             SSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999994      4589999999999999999999999999999


Q ss_pred             hcc-eEEEecCCc
Q 011873          442 RKF-RWEKIIPDE  453 (475)
Q Consensus       442 ~~f-~~~~~~~~~  453 (475)
                      ++| ++++..++.
T Consensus       379 ~~fp~~~l~~~~~  391 (417)
T 3tyw_A          379 RRVPTLRLAGERD  391 (417)
T ss_dssp             HHCTTCEECSCTT
T ss_pred             HhCCcccccCCCc
Confidence            999 999975543


No 66 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=6.9e-59  Score=442.80  Aligned_cols=374  Identities=15%  Similarity=0.203  Sum_probs=300.5

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccccCch---hh--------hhhhcCCCCCCC-
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFKPWLP---RI--------IENSFKSSPNIT-  121 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~---~~--------~~~~~g~~~~~~-  121 (475)
                      .+++.++.++.++ || |+++.. ++.++++|++++.++++++++. .|++...   ..        ....++..+++. 
T Consensus        38 ~~p~~~~~~lr~~-gp-v~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  114 (426)
T 3rwl_A           38 DSVGEYFKRLRKD-DP-VHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM  114 (426)
T ss_dssp             TCHHHHHHHHHHH-CS-EEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred             CCccHHHHHHHhc-CC-eeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCccccc
Confidence            5789999988775 99 999987 4567999999999999998775 3433221   00        111122335666 


Q ss_pred             CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHH
Q 011873          122 LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENL  200 (475)
Q Consensus       122 ~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  200 (475)
                      +|+.|+++|+++++.|++..++++.+.+.+.+.++++. +..++++|+...+ ..++.++++. +||.+..+ .+.+...
T Consensus       115 dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~-l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-~~~~~~~  191 (426)
T 3rwl_A          115 DRPRHDEQRKAVSPIVAPANLAALEGTIRERVSKTLDG-LPVGEEFDWVDRVSIEITTQMLAT-LFDFPFEE-RRKLTRW  191 (426)
T ss_dssp             CTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHT-SCSSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG-THHHHHH
T ss_pred             CchHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHH-hhcCCCcchHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHH
Confidence            99999999999999999999999999999999999995 6667899977766 5788887776 79976543 2333322


Q ss_pred             HHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHH
Q 011873          201 AHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKM  280 (475)
Q Consensus       201 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~  280 (475)
                          ...+..++.........+..++.+.+.+++.++++++++.      ...+|+++.++....++  .++++++..++
T Consensus       192 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~~dll~~ll~~~~~~--~ls~~el~~~~  259 (426)
T 3rwl_A          192 ----SDVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVNK------DPGNDLISMLAHSPATR--NMTPEEYLGNV  259 (426)
T ss_dssp             ----HHHHTCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTS------CCCSSHHHHHHHCGGGG--GCCHHHHHHHH
T ss_pred             ----HHHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCCHHHHHHhcccCC--CCCHHHHHHHH
Confidence                2222222211111223445566778888888888877321      45679999999865432  38999999999


Q ss_pred             HHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccc
Q 011873          281 QAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFRE  360 (475)
Q Consensus       281 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~  360 (475)
                      ..+++||+|||+++++|++++|++||++|+||++|+                     +|++|||+|+||++||++.+.|.
T Consensus       260 ~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~---------------------~~l~a~i~E~LRl~p~~~~~~R~  318 (426)
T 3rwl_A          260 LLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP---------------------ALVETMVPEIIRWQTPLAHMRRT  318 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------------HhHHHHHHHHHHhcCccccCcee
Confidence            999999999999999999999999999999999873                     48999999999999999988999


Q ss_pred             cccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHH
Q 011873          361 ALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNL  440 (475)
Q Consensus       361 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~l  440 (475)
                      +++|++|+|+.||||+.|.++.+++|+||++|+||++|+|+||.+     ..|+|||+|+|.|+|++||.+|++++++.|
T Consensus       319 ~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~-----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~l  393 (426)
T 3rwl_A          319 AIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP-----RQHLSFGFGIHRCVGNRLAEMQLRILWEEI  393 (426)
T ss_dssp             ESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT-----TCCSTTCCSTTSCSSHHHHHHHHHHHHHHH
T ss_pred             cCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC-----CCccCCCCCCcCCccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999953     579999999999999999999999999999


Q ss_pred             Hhcc-eEEEecCCcccccCccCCCCCCcceEeee
Q 011873          441 VRKF-RWEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       441 l~~f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      +++| ++++.++ .....+...+....++|+++|
T Consensus       394 l~~f~~~~l~~~-~~~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          394 LTRFSRIEVMAE-PERVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             HTTCSEEEECSC-CEECCCSSBCCEEECEEEEEC
T ss_pred             HHhCccCeeCCC-CcccccccccCcceeeEEEeC
Confidence            9999 9999754 334455667777789999876


No 67 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=4.3e-59  Score=439.99  Aligned_cols=361  Identities=17%  Similarity=0.194  Sum_probs=295.4

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCC----CcEEEecCcccchhhhccCCcccccCchhh-h-hhhcCCCCCCC-CchHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLG----ADMVFLCSAEGNKLLFSNEHKLFKPWLPRI-I-ENSFKSSPNIT-LQDEFN  127 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~----~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~-~-~~~~g~~~~~~-~~~~~~  127 (475)
                      .+++.++.++ ++||| ||++.+++    .++++|+||+.+++++++.. .|.+..... . ....+..+++. +|+.|+
T Consensus        12 ~~p~~~~~~l-r~yGp-v~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~   88 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGP-LHEYDTEPGMDGRKQWLVTGHDEVRAILADHE-RFSSMRPVDDEADRALLPGILQAYDPPDHT   88 (384)
T ss_dssp             TEECHHHHHH-HHTCS-EECCCCC------CEEEECCHHHHHHHHHCTT-TEECSCCCC-----CCCTTCGGGCCTTHHH
T ss_pred             cChhHHHHHH-HhcCC-eeecccccccCCCCEEEEcCHHHHHHHHhCch-hccCCccccccccccccccccccCCChhHH
Confidence            6889999998 59999 99999876    89999999999999996553 454332111 1 11122335566 999999


Q ss_pred             HHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhh
Q 011873          128 SLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTE  207 (475)
Q Consensus       128 ~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~  207 (475)
                      ++|+++++.|+.++++++.+.+.+.+.++++.+...++++|+.+++...+...+...+||.+.++. +++......+.. 
T Consensus        89 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~-~~~~~~~~~~~~-  166 (384)
T 3oo3_A           89 RLRRTVAPAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ-AELSRMIRESRE-  166 (384)
T ss_dssp             HHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-HHHHHHHHHHHH-
T ss_pred             HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHhc-
Confidence            999999999999999999999999999999975456779999999988877777777899876432 344433333322 


Q ss_pred             hhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhc
Q 011873          208 FFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGA  287 (475)
Q Consensus       208 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag  287 (475)
                               .....+..++.+.+.+++.+.++++++       ...+|+++.++...   +..++++++..++..+++||
T Consensus       167 ---------~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~d~l~~ll~~~---~~~l~~~~l~~~~~~~~~AG  227 (384)
T 3oo3_A          167 ---------SRLPRQRTLSGLGIVNYTKRLTSGKRR-------DPGDGMIGVIVREH---GAEISDEELAGLAEGNLIMA  227 (384)
T ss_dssp             ---------CSCHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHH
T ss_pred             ---------cCChHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHhh
Confidence                     112355667778888999999988765       34579999999762   23489999999999999999


Q ss_pred             ccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccccccc
Q 011873          288 YDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREALTEVT  366 (475)
Q Consensus       288 ~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~  366 (475)
                      +|||+++++|++++|++||++|+|+++|++.                     |+|||+|+||++||++ +++|.+++|++
T Consensus       228 ~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~---------------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~  286 (384)
T 3oo3_A          228 AEQMAAQLAVAVLLLVTHPDQMALLREKPEL---------------------IDSATEEVLRHASIVEAPAPRVALADVR  286 (384)
T ss_dssp             HHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG---------------------HHHHHHHHHHHHCSCSCCSCEEESSCEE
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH---------------------HHHHHHHHHHhCCcccCCcceeeCCCEE
Confidence            9999999999999999999999999999763                     7899999999999998 58899999999


Q ss_pred             cCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-e
Q 011873          367 IDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-R  445 (475)
Q Consensus       367 l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~  445 (475)
                      ++||.||||+.|.++.+++|+     +||++|+||||      +..|+|||+|+|.|||++||.+|++++++.|+++| +
T Consensus       287 ~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~  355 (384)
T 3oo3_A          287 MAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPS  355 (384)
T ss_dssp             ETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred             ECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999     89999999995      45799999999999999999999999999999999 9


Q ss_pred             EEEecCCccc--cc-CccCCCCCCcceEe
Q 011873          446 WEKIIPDEKM--IR-NPNLMPEKGLPVRL  471 (475)
Q Consensus       446 ~~~~~~~~~~--~~-~~~~~p~~~~~v~~  471 (475)
                      +++.+++...  .. +.+.++.+.++|++
T Consensus       356 ~~l~~~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          356 LRLAVPEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             CEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred             CeeCCCCccceeecccccccCcceeeeeC
Confidence            9998654433  33 55677777788764


No 68 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=6.1e-60  Score=447.23  Aligned_cols=359  Identities=18%  Similarity=0.215  Sum_probs=284.5

Q ss_pred             HHHHHHhhcCcceeeccC-CC---cEEEecCcccchhhh-ccCCcccccCch-------h---hhhhhcCCCCCCC-Cch
Q 011873           61 MSQRMQKYSSKIFKTSYL-GA---DMVFLCSAEGNKLLF-SNEHKLFKPWLP-------R---IIENSFKSSPNIT-LQD  124 (475)
Q Consensus        61 ~~~~~~~yG~~vf~i~~~-~~---~~vvv~~p~~~~~i~-~~~~~~~~~~~~-------~---~~~~~~g~~~~~~-~~~  124 (475)
                      +.+++++ |+ ||++.++ |.   ++++|+||+.+++++ +++.  |.....       .   ......+..++++ +|+
T Consensus        19 ~~~l~~~-Gp-v~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   94 (398)
T 1lfk_A           19 ADELLAA-GA-LTRVTIGSGADAETHWMATAHAVVRQVMGDHQQ--FSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPP   94 (398)
T ss_dssp             CHHHHTS-CS-EEEEC------CCCEEEECSHHHHHHHHHCTTT--EEECTTCCC-------------CCTTCGGGCCTT
T ss_pred             hHHHHhc-CC-ccccccCCCCcccceEEEecHHHHHHHHhhCcc--cccccccccccccCCcccccccccccCccccCCH
Confidence            3446555 99 9999875 55   899999999999999 5532  433221       1   1112222336777 999


Q ss_pred             HHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHH-HHHHHHHHHhhcCCCCchhHHHHHHHHH
Q 011873          125 EFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRK-FIFALCSELMYNIHDTRTADELENLAHC  203 (475)
Q Consensus       125 ~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~-~~~~~~~~~~fG~~~~~~~~~~~~~~~~  203 (475)
                      .|+++|+++++.|+..+++++.+.+.+.+.++++++...++++|+.+++.. ++.++++. +||.+..+ .+++....  
T Consensus        95 ~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~--  170 (398)
T 1lfk_A           95 EHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCE-LVGVPRDD-RDMFMKLC--  170 (398)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-HHHHHHHH--
T ss_pred             HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHH--
Confidence            999999999999999999999999999999999864445678999998886 88888887 59987643 22332222  


Q ss_pred             HHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q 011873          204 IMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAV  283 (475)
Q Consensus       204 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~  283 (475)
                        ..+...    +. ..++..++.+.+.+++.+.++++++       ...+|+++.+++..   +..++++++..++..+
T Consensus       171 --~~~~~~----~~-~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~~---~~~l~~~el~~~~~~l  233 (398)
T 1lfk_A          171 --HGHLDA----SL-SQKRRAALGDKFSRYLLAMIARERK-------EPGEGMIGAVVAEY---GDDATDEELRGFCVQV  233 (398)
T ss_dssp             --HHTTCT----TS-CHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHHH---GGGSCHHHHHHHHHHH
T ss_pred             --HHHHhc----cc-chHHHHHHHHHHHHHHHHHHHHHHh-------CCCCCHHHHHHHhc---CCCCCHHHHHHHHHHH
Confidence              222211    11 2345566777888899999988875       23569999999764   2248999999999999


Q ss_pred             HHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccc
Q 011873          284 LIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREAL  362 (475)
Q Consensus       284 ~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~  362 (475)
                      ++||+|||+++++|++++|++||++|+|+++|++                     |++|||+|+||++||++ +++|.+.
T Consensus       234 ~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~  292 (398)
T 1lfk_A          234 MLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------------------SAQRAVDELIRYLTVPYSPTPRIAR  292 (398)
T ss_dssp             HHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH---------------------HHHHHHHHHHHHHCCBSCCSCEEES
T ss_pred             HHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCcccccccceecC
Confidence            9999999999999999999999999999998864                     68899999999999999 7899999


Q ss_pred             cccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHh
Q 011873          363 TEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVR  442 (475)
Q Consensus       363 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~  442 (475)
                      +|++++||.||||+.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|++||.+|++++++.|++
T Consensus       293 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~  366 (398)
T 1lfk_A          293 EDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP------IPHVAFGHGVHHCLGAALARLELRTVFTELWR  366 (398)
T ss_dssp             SCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999984      35899999999999999999999999999999


Q ss_pred             cc-eEEEecCCcc--cccCccCCCCCCcceEe
Q 011873          443 KF-RWEKIIPDEK--MIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       443 ~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~  471 (475)
                      +| ++++.+++..  +..+...+....++|++
T Consensus       367 ~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          367 RFPALRLADPAQDTEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             HCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred             hCCCCEeCCCCCccccccCcCcCCcccceeeC
Confidence            99 8999754332  33344556666666653


No 69 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=1.8e-59  Score=443.41  Aligned_cols=364  Identities=15%  Similarity=0.166  Sum_probs=287.4

Q ss_pred             CChhHHHHHHHHhhcCcceeecc-CCCcEEEecCcccchhhhccCCcccc-c-Cch---hhh-----hhhcCCCCCCCCc
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSY-LGADMVFLCSAEGNKLLFSNEHKLFK-P-WLP---RII-----ENSFKSSPNITLQ  123 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~-~~~~~vvv~~p~~~~~i~~~~~~~~~-~-~~~---~~~-----~~~~g~~~~~~~~  123 (475)
                      .+++.++.+| ++||+ +|++.+ ++.+.++|+|++.+++++.++.  |. + ...   ...     ....|. ++++. 
T Consensus        16 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~-   89 (396)
T 1n40_A           16 DRIPDAVAEL-RTREP-IRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVN-NMGNI-   89 (396)
T ss_dssp             SSCCHHHHHH-HHHCS-EEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGG-HHHHH-
T ss_pred             cCccHHHHHH-HHhCC-eeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhh-hhhhH-
Confidence            6788999999 99999 999997 7889999999999999998753  33 2 211   001     011111 22213 


Q ss_pred             hHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHH-HHHHHHHHHHhhcCCCCchhHHHHHHHH
Q 011873          124 DEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSR-KFIFALCSELMYNIHDTRTADELENLAH  202 (475)
Q Consensus       124 ~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~  202 (475)
                       .|+++|+++++.|++. ++++.+.+.+.+.++++....+++++|+...+. .+++++++. +||.+.++ .+++.....
T Consensus        90 -~h~~~R~~~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~~  165 (396)
T 1n40_A           90 -ADAGLRKAVMKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCK-VLGIPQED-GPKLFRSLS  165 (396)
T ss_dssp             -HHTTCHHHHHHHTSSC-STTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHH-HHTCCGGG-HHHHHHTHH
T ss_pred             -HHHHHHHHHHHhhChH-HHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHH-HhCCChhh-HHHHHHHHH
Confidence             8999999999999999 999999999999999986433267899986664 799999998 79987642 233333333


Q ss_pred             HHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhcc-CCCCCCHHHHHHHHH
Q 011873          203 CIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNK-DGEDLTESEIALKMQ  281 (475)
Q Consensus       203 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~~~~~~~~i~~~~~  281 (475)
                      .+..    .....|   .++..++.+.+ +++.++++      +.   ....|+++.+++.... ++..++++++..++.
T Consensus       166 ~~~~----~~~~~p---~~~~~~~~~~~-~~~~~~i~------~~---~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~  228 (396)
T 1n40_A          166 IAFM----SSADPI---PAAKINWDRDI-EYMAGILE------NP---NITTGLMGELSRLRKDPAYSHVSDELFATIGV  228 (396)
T ss_dssp             HHTB----CCSSCC---HHHHHHHHHHH-HHHHHHHH------CT---TCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHH
T ss_pred             HHhc----cccCCC---HHHHHHHHHHH-HHHHHHHh------CC---CCCCCHHHHHHHhhcccccCCCCHHHHHHHHH
Confidence            2221    111112   13444555556 66666665      11   2347999999976522 344599999999999


Q ss_pred             HHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccc
Q 011873          282 AVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFRE  360 (475)
Q Consensus       282 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~  360 (475)
                      .+++||+|||+++++|++++|++||++|+|+++|+                     .|++|||+|+||++||++ +++|.
T Consensus       229 ~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~  287 (396)
T 1n40_A          229 TFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP---------------------ELIPAGVEELLRINLSFADGLPRL  287 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHTCCCBCSCEEEE
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH---------------------HHHHHHHHHHHhhCCCccccccee
Confidence            99999999999999999999999999999999874                     279999999999999999 78999


Q ss_pred             cccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHH
Q 011873          361 ALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNL  440 (475)
Q Consensus       361 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~l  440 (475)
                      +.+|++++||.||||+.|.++.+++||||++|+||++|+||||.+     ..++|||+|+|.|+|+++|++|++++++.|
T Consensus       288 ~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-----~~~~~FG~G~r~C~G~~lA~~e~~~~la~l  362 (396)
T 1n40_A          288 ATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-----TSHLAFGRGQHFCPGSALGRRHAQIGIEAL  362 (396)
T ss_dssp             ESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-----TCSSTTCCGGGCCTTHHHHHHHHHHHHHHH
T ss_pred             cCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC-----CCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999974     468999999999999999999999999999


Q ss_pred             Hhcc-eEEEecCCcc--cccCccCCCCCCcceEe
Q 011873          441 VRKF-RWEKIIPDEK--MIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       441 l~~f-~~~~~~~~~~--~~~~~~~~p~~~~~v~~  471 (475)
                      +++| ++++.+++..  ...+.+.++.++++|++
T Consensus       363 l~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          363 LKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             HHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             HHhCccccccCCccccccccccccCCcceeeeeC
Confidence            9999 5999764333  33455677888888864


No 70 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=3.8e-58  Score=433.76  Aligned_cols=370  Identities=18%  Similarity=0.249  Sum_probs=296.3

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch-hhhhh-hcCCCCCCC-CchHHHHHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP-RIIEN-SFKSSPNIT-LQDEFNSLRR  131 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~~~~~-~~g~~~~~~-~~~~~~~~R~  131 (475)
                      .+++.++.++.+ +|| |+++.. |  .++|++++.++++++++.  |+.... ..... ..+..+++. +|+.|+++|+
T Consensus        20 ~dp~~~~~~lr~-~~p-v~~~~~-g--~~~v~~~~~v~~~l~d~~--fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~   92 (394)
T 2wiy_A           20 NNPYPWYRRLQQ-DHP-VHKLED-G--TYLVSRYADVSHFAKLPI--MSVEPGWADAGPWAVASDTALGSDPPHHTVLRR   92 (394)
T ss_dssp             HCCHHHHHHHHH-HCS-EEECTT-S--CEEECCHHHHHHHTTSTT--EECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHH
T ss_pred             cCccHHHHHHHh-cCC-eEEecC-C--eEEEcCHHHHHHHHcCCC--ccccccccccccchhcccccccCCchHHHHHHH
Confidence            578888887755 588 998764 3  689999999999997652  432210 00111 122235666 9999999999


Q ss_pred             HhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhc
Q 011873          132 VIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLSRKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFII  211 (475)
Q Consensus       132 ~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  211 (475)
                      ++++.|+++.++.+.+.+.+.+.++++. +..++++|+...+..++.++++..+||.+..+ ...+...+...   +.. 
T Consensus        93 ~~~~~fs~~~~~~~~~~i~~~~~~l~~~-~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-~~~~~~~~~~~---~~~-  166 (394)
T 2wiy_A           93 QTNKWFTPKLVDGWVRTTRELVGDLLDG-VEAGQVIEARRDLAVVPTHVTMARVLQLPEDD-ADAVMEAMFEA---MLM-  166 (394)
T ss_dssp             HHHTTCSHHHHHHHTHHHHHHHHHHHHT-CCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCC-HHHHHHHHHHH---HGG-
T ss_pred             HHHhccCHHHHHHHHHHHHHHHHHHHHH-HhccCCeeHHHHHHhhhHHHHHHHHcCCCHhH-HHHHHHHHHHH---HHh-
Confidence            9999999999999999999999999985 55677899999999999999999999987653 23333332221   111 


Q ss_pred             CcCCCC-cccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccC
Q 011873          212 PVNIPG-TKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDN  290 (475)
Q Consensus       212 ~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~t  290 (475)
                      ....|. ....+..++.+.+.+++.++++++++       ...+|+++.+++...+ + .++++++.+++..+++||+||
T Consensus       167 ~~~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~-------~~~~dll~~Ll~~~~~-~-~ls~~el~~~~~~l~~AG~eT  237 (394)
T 2wiy_A          167 QSAEPADGDVDRAAVAFGYLSARVAEMLEDKRV-------NPGDGLADSLLDAARA-G-EITESEAIATILVFYAVGHMA  237 (394)
T ss_dssp             GSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHHHHT-T-SSCHHHHHHHHHHHHHHTTTH
T ss_pred             ccCCccchHHHHHHHHHHHHHHHHHHHHHHhhc-------CCCCcHHHHHHHhhhc-C-CCCHHHHHHHHHHHHHhhhhh
Confidence            111121 12233445667778888888888765       3346899999976532 2 499999999999999999999


Q ss_pred             hHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCce
Q 011873          291 PSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGY  370 (475)
Q Consensus       291 t~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~  370 (475)
                      |+++++|++++|++||++|+++++|+                     +|++|||+|+||++||+++++|.+++|++++|+
T Consensus       238 Ta~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~  296 (394)
T 2wiy_A          238 IGYLIASGIELFARRPEVFTAFRNDE---------------------SARAAIINEMVRMDPPQLSFLRFPTEDVEIGGV  296 (394)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETTE
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHhhCCCccCeeEEECCCEEEcCe
Confidence            99999999999999999999999874                     378999999999999998888999999999999


Q ss_pred             EeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcce-EEEe
Q 011873          371 TIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFR-WEKI  449 (475)
Q Consensus       371 ~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~  449 (475)
                      .||||+.|.++.+++||||++|+||++|+|+||++.    ..++|||+|+|.|+|++||++|++++++.|+++|+ +++.
T Consensus       297 ~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~  372 (394)
T 2wiy_A          297 LIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA----SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELA  372 (394)
T ss_dssp             EECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG----SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEES
T ss_pred             ecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC----CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceEC
Confidence            999999999999999999999999999999999853    46899999999999999999999999999999998 9987


Q ss_pred             cCCcccccCccCCCCCCcceEee
Q 011873          450 IPDEKMIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       450 ~~~~~~~~~~~~~p~~~~~v~~~  472 (475)
                      + +..+..+...+....++|++.
T Consensus       373 ~-~~~~~~~~~~~g~~~lpv~~~  394 (394)
T 2wiy_A          373 E-EPTVAHNDFARRYRKLPIVLS  394 (394)
T ss_dssp             S-CCEECCCSSBCCEEECEEEEC
T ss_pred             C-CCcccccccccCcceeeEEeC
Confidence            4 334455666777778888763


No 71 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.2e-58  Score=433.02  Aligned_cols=350  Identities=20%  Similarity=0.254  Sum_probs=287.3

Q ss_pred             hHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch--h-hh-----h-hhcC---CCCCCC-Cch
Q 011873           58 EKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP--R-II-----E-NSFK---SSPNIT-LQD  124 (475)
Q Consensus        58 ~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~--~-~~-----~-~~~g---~~~~~~-~~~  124 (475)
                      +..+.++ ++||| ||++.  |  .+++++|+.+++++.+++ .|.+...  . .+     . .+.|   ..++++ +|+
T Consensus         2 ~~~~~~l-r~~gp-v~~~~--g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~   74 (367)
T 3b4x_A            2 YDWFKQM-RKESP-VYYDG--K--VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP   74 (367)
T ss_dssp             HHHHHHH-HHHCS-EEECS--S--SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred             CHHHHHH-HHcCC-ceeeC--C--EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhcccccccccCCch
Confidence            4456666 57999 99987  3  899999999999998764 4543311  1 22     2 3445   247777 999


Q ss_pred             HHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHH
Q 011873          125 EFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHC  203 (475)
Q Consensus       125 ~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  203 (475)
                      .|+++|+++++.|+.+.+++  +.+.+.+.++++. +.  +++|+.+.+ ..+++++++. +||.+ . ...++......
T Consensus        75 ~h~~~R~~~~~~fs~~~l~~--~~i~~~~~~l~~~-l~--g~~d~~~~~~~~~~~~vi~~-~~G~~-~-~~~~~~~~~~~  146 (367)
T 3b4x_A           75 LHDELRNLTADAFNPSNLPV--DFVREVTVKLLSE-LD--EEFDVIESFAIPLPILVISK-MLGIN-P-DVKKVKDWSDL  146 (367)
T ss_dssp             HHHHHHHTTGGGGSGGGSCH--HHHHHHHHHHHHT-CC--SEEEHHHHTTTHHHHHHHHH-HHTCC-C-CHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcCHhhhcc--hHHHHHHHHHHHh-cc--CCcchHHHHHHhhHHHHHHH-HcCCC-C-cHHHHHHHHHH
Confidence            99999999999999999988  9999999999986 44  359998654 7999999999 79998 4 33445444444


Q ss_pred             HHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q 011873          204 IMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAV  283 (475)
Q Consensus       204 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~  283 (475)
                      +...+..    .|. .+++. ++.+.+.+++.++++++++       ...+|+++.+++.      .++++++..++..+
T Consensus       147 ~~~~~~~----~p~-~~~~~-~~~~~~~~~~~~~i~~r~~-------~~~~dll~~ll~~------~ls~~el~~~~~~l  207 (367)
T 3b4x_A          147 VALRLGR----ADE-IFSIG-RKYLELISFSKKELDSRKG-------KEIVDLTGKIANS------NLSELEKEGYFILL  207 (367)
T ss_dssp             HHTTTTS----TTG-GGCCC-HHHHHHHHHHHHHHHHHTT-------TCCSSHHHHHHTS------SSCHHHHHHHHHHH
T ss_pred             HHhccCC----Chh-hHHHH-HHHHHHHHHHHHHHHHHhc-------CCCCCHHHHHHhc------cCCHHHHHHHHHHH
Confidence            3332211    222 12223 6677888888888887764       2357999999965      38999999999999


Q ss_pred             HHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccc
Q 011873          284 LIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALT  363 (475)
Q Consensus       284 ~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~  363 (475)
                      ++||+|||+++++|++++|++ |++|+|+++|++                       +|||+|+||++||++.++|.+.+
T Consensus       208 ~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-----------------------~a~i~E~lRl~p~~~~~~R~~~~  263 (367)
T 3b4x_A          208 MIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA-----------------------LKAVEEALRFSPPVMRTIRVTKE  263 (367)
T ss_dssp             HHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-----------------------HHHHHHHHHHSCSBCCEEEEESS
T ss_pred             HHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-----------------------hHHHHHHHHhcCcccCeeEEeCC
Confidence            999999999999999999999 999999999853                       69999999999999988999999


Q ss_pred             ccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011873          364 EVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       364 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      |++++||.||||+.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|++||++|++++++.|+++
T Consensus       264 d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~  337 (367)
T 3b4x_A          264 KVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKK  337 (367)
T ss_dssp             CEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999985      368999999999999999999999999999999


Q ss_pred             c-eEEEecCCcccccCccCCCCCCcceEeee
Q 011873          444 F-RWEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       444 f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      | ++++.++  .+..+...++..+++|++++
T Consensus       338 f~~~~l~~~--~~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          338 FRVKEIVKK--EKIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             EEEEEEEEE--EECCCSSBCSEEEEEEEEEE
T ss_pred             CCCceeCCc--cccccccccCcceEEEEecC
Confidence            9 7999764  45556677788889999865


No 72 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1.1e-57  Score=427.05  Aligned_cols=352  Identities=20%  Similarity=0.258  Sum_probs=280.8

Q ss_pred             hHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCch--h-hhh----hh--cC--C-CCCCC-Cch
Q 011873           58 EKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLP--R-IIE----NS--FK--S-SPNIT-LQD  124 (475)
Q Consensus        58 ~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~--~-~~~----~~--~g--~-~~~~~-~~~  124 (475)
                      +.++.++ ++||| ||++   | +.+++++++.+++++.+++ .|++...  . .+.    ..  ++  . .++++ +|+
T Consensus         2 ~~~~~~l-r~~Gp-v~~~---g-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~   74 (368)
T 1io7_A            2 YDWFSEM-RKKDP-VYYD---G-NIWQVFSYRYTKEVLNNFS-KFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP   74 (368)
T ss_dssp             HHHHHHH-HHHCS-EEEC---S-SCEEECSHHHHHHHHHCTT-TEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred             CHHHHHH-HhcCC-eEeE---C-CEEEEecHHHHHHHHcCcc-cccccccccccccccccccccccccccccccccCCCh
Confidence            4566666 58999 9987   4 5899999999999998754 4554432  1 111    11  22  1 36667 999


Q ss_pred             HHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHH
Q 011873          125 EFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHC  203 (475)
Q Consensus       125 ~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  203 (475)
                      .|+++|+++++.|++..++++.+.+.+.+.+++++.  ..+++|+.+.+ ..+++++++.+ ||.+..+ .++    +..
T Consensus        75 ~h~~~R~~~~~~f~~~~~~~~~~~i~~~~~~l~~~l--~~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~----~~~  146 (368)
T 1io7_A           75 LHDELRSMSADIFSPQKLQTLETFIRETTRSLLDSI--DPREDDIVKKLAVPLPIIVISKI-LGLPIED-KEK----FKE  146 (368)
T ss_dssp             HHHHHHGGGTTTTCHHHHHHHHHHHHHHHHHHHHTC--CTTSEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHH----HHH
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHh--hcCCccHHHHHHHHHHHHHHHHH-hCCCHHH-HHH----HHH
Confidence            999999999999999999999999999999999975  44579998866 78999999999 9987643 222    222


Q ss_pred             HHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q 011873          204 IMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAV  283 (475)
Q Consensus       204 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~  283 (475)
                      +...+..... .|. ..++..++.+.+.+++.+.+            ...+|+++.+++.      .++++++..++..+
T Consensus       147 ~~~~~~~~~~-~p~-~~~~~~~~~~~~~~~~~~~i------------~~~~d~l~~ll~~------~l~~~ei~~~~~~l  206 (368)
T 1io7_A          147 WSDLVAFRLG-KPG-EIFELGKKYLELIGYVKDHL------------NSGTEVVSRVVNS------NLSDIEKLGYIILL  206 (368)
T ss_dssp             HGGGCTTSCC-CTT-CHHHHHHHHHHHHHHHHHHT------------TSSCHHHHHHHTS------SCCHHHHHHHHHHH
T ss_pred             HHHHHHhccC-ChH-HHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHhc------cCCHHHHHHHHHHH
Confidence            3333222110 122 12233344455555555544            1246899999864      38999999999999


Q ss_pred             HHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCcccccccc
Q 011873          284 LIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALT  363 (475)
Q Consensus       284 ~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~  363 (475)
                      ++||+|||+++++|++++|++|| +|+|+++| +                     |++|||+|+||++||+++++|.+++
T Consensus       207 ~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~  263 (368)
T 1io7_A          207 LIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N---------------------LYLKAIEEALRYSPPVMRTVRKTKE  263 (368)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T---------------------CHHHHHHHHHHHSCSBCCEEEEESS
T ss_pred             HHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c---------------------hHHHHHHHHHHhCcccccCceeeCC
Confidence            99999999999999999999999 99999998 2                     7899999999999999988999999


Q ss_pred             ccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011873          364 EVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRK  443 (475)
Q Consensus       364 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~  443 (475)
                      |++++||.||||+.|.++.+++||||++|+||++|+|||+      +..++|||+|+|.|+|+++|++|++++++.|+++
T Consensus       264 d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~  337 (368)
T 1io7_A          264 RVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKR  337 (368)
T ss_dssp             CEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTT
T ss_pred             CeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999993      2468999999999999999999999999999999


Q ss_pred             ce-EEEecCCcccccCccCCCCCCcceEeeeCC
Q 011873          444 FR-WEKIIPDEKMIRNPNLMPEKGLPVRLYPNN  475 (475)
Q Consensus       444 f~-~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  475 (475)
                      |+ +++.+  .....+.+.++..+++|++++|+
T Consensus       338 f~~~~~~~--~~~~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          338 FRHIEILD--TEKVPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             CSEEEEEE--EEECCCSSBCCEEEEEEEEEC--
T ss_pred             CCCCEecC--ceeccCCcccCCceeEEEeccCC
Confidence            96 99975  33344567778888999999985


No 73 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=4.3e-58  Score=436.61  Aligned_cols=370  Identities=14%  Similarity=0.181  Sum_probs=295.8

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh--------hhhhhcCCCCCCC-CchH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR--------IIENSFKSSPNIT-LQDE  125 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~--------~~~~~~g~~~~~~-~~~~  125 (475)
                      .+++.+  ++.++||+ ++++.+++.. ++|++++.++++++++...+......        .....++. +++. +|+.
T Consensus        33 ~~P~~~--~~lr~~gp-v~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~dg~~  107 (416)
T 3p3o_A           33 NFSWDS--PEVAEARE-KSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMVD-FLQSLDGAD  107 (416)
T ss_dssp             TCCTTS--HHHHHHHH-HCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHHH-SGGGCCHHH
T ss_pred             cCCchH--HHHHHhCC-ccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhcC-ccccCCchH
Confidence            567776  55678999 9999886556 99999999999998775222211000        01111222 5666 9999


Q ss_pred             HHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehh-hHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHH
Q 011873          126 FNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHD-LSRKFIFALCSELMYNIHDTRTADELENLAHCI  204 (475)
Q Consensus       126 ~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  204 (475)
                      |+++|+++++.|+++.++++.+.+.+.+.+++++.  .++++|+.. ....+++++++.+ ||.+..+. +.+..    +
T Consensus       108 h~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l--~~g~~d~~~~~~~~~~~~vi~~l-~G~~~~~~-~~~~~----~  179 (416)
T 3p3o_A          108 HRRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKL--PQGDFDFVQHFPHPLPALVMCQL-LGFPLEDY-DTVGR----L  179 (416)
T ss_dssp             HHHHHHTTCGGGSHHHHHHHHHHHHHHHHHHHHTC--CSSSEEHHHHTTTHHHHHHHHHH-HTCCGGGH-HHHHH----H
T ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhh--ccCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-HHHHH----H
Confidence            99999999999999999999999999999999974  456799654 4556999999984 89865432 33332    2


Q ss_pred             Hhhhhh-cCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Q 011873          205 MTEFFI-IPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAV  283 (475)
Q Consensus       205 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~  283 (475)
                      ...+.. +....+.....+..++.+.+.+++.++++++++       ...+|+++.+++...++  .++++++..++..+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-------~~~~dll~~ll~~~~~~--~ls~~el~~~~~~l  250 (416)
T 3p3o_A          180 SIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKV-------EPGDDLTSDIVRAFHDG--VLDDYELRTLVATV  250 (416)
T ss_dssp             HHTTCGGGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------SCCSSHHHHHHHHHHTT--SSCHHHHHHHHHHH
T ss_pred             HHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-------CCCccHHHHHHHhhccC--CCCHHHHHHHHHHH
Confidence            222221 111111222345667778888999999998876       35679999999875443  69999999999999


Q ss_pred             HHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCC-ccccccc
Q 011873          284 LIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNS-GTFREAL  362 (475)
Q Consensus       284 ~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~  362 (475)
                      ++||+|||+++++|++++|++||++|+||++|++                     |++|||+|+||++||++ .++|.++
T Consensus       251 ~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~  309 (416)
T 3p3o_A          251 LVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE---------------------LAPQAVEEVLRWSPTLPVTATRVAA  309 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSCSSCCEEEES
T ss_pred             HHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhccccccCcceEeC
Confidence            9999999999999999999999999999998753                     78999999999999994 7889999


Q ss_pred             cccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHh
Q 011873          363 TEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVR  442 (475)
Q Consensus       363 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~  442 (475)
                      +|++++|+.||||+.|.++.+++||||++|+||++|+|+||.+     ..|+|||+|+|.|+|++||.+|++++++.|++
T Consensus       310 ~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~-----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~  384 (416)
T 3p3o_A          310 EDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE-----APSIAFGGGPHFCLGTALARLELTEAVAALAT  384 (416)
T ss_dssp             SCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS-----SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC-----CCeecCCCCCccCcCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999743     45899999999999999999999999999999


Q ss_pred             cce-EEEecCCcccccCccCCCCCCcceEeee
Q 011873          443 KFR-WEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       443 ~f~-~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      +|+ +++.++ ..+..+...+....++|+++|
T Consensus       385 ~f~~~~l~~~-~~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          385 RLDPPQIAGE-ITWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             HSCCEEECSC-CEECCCTTCCCEEECEEEESC
T ss_pred             hCCccccCCC-CceecCCCccCcceeeEEEec
Confidence            994 888644 355556677777789998875


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=2e-57  Score=421.12  Aligned_cols=335  Identities=17%  Similarity=0.261  Sum_probs=261.6

Q ss_pred             HhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh-hhhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHH
Q 011873           66 QKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR-IIENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALR  143 (475)
Q Consensus        66 ~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~-~~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~  143 (475)
                      ++||| ||++   |  .++|++|+.+++++.+++ .|.+.... ....  +..++++ +|+.|+++|+++++.|+..+++
T Consensus         2 r~~gp-v~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~--~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~   72 (343)
T 2rfb_A            2 RLNDP-VHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSNA--GGISFITMDNPEHKEFRDISAPYFLPSKIN   72 (343)
T ss_dssp             -CCCC-EEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHHHSHHHHG
T ss_pred             CCcCC-eeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCCc--cccccccCCchHHHHHHHHhhhhcCHHHHH
Confidence            68999 9986   3  899999999999998764 45433210 0112  2336667 9999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCc-ccc
Q 011873          144 RYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGT-KFG  221 (475)
Q Consensus       144 ~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~  221 (475)
                      ++.+.+.+.+.+++++ +.   ++|+.+.+ ..+++++++.+ ||.+..+ .+++......+...+      .|.. .++
T Consensus        73 ~~~~~i~~~~~~l~~~-l~---~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~~~~~------~p~~~~~~  140 (343)
T 2rfb_A           73 DYKDFIEETSNDLIKN-ID---NKDIISEYAVRLPVNIISKI-LGIPDSD-MPLFKLWSDYIIGNK------RDENFNYV  140 (343)
T ss_dssp             GGHHHHHHHHHHHHTT-CT---TSCHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHHTSC------CSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHh-cc---ccCHHHHHhhhhhHHHHHHH-cCCCHHH-HHHHHHHHHHHhhcc------CcchhhHH
Confidence            9999999999999985 44   78888754 89999999998 9987643 233433333322211      1221 111


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHH
Q 011873          222 RAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKF  301 (475)
Q Consensus       222 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  301 (475)
                      +. ++.+.+.+++.+++              .+| ++.+++... ++..++++++..++..+++||+|||+++++|++++
T Consensus       141 ~~-~~~~~~~~~~~~~i--------------~~d-l~~ll~~~~-~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~  203 (343)
T 2rfb_A          141 NN-RMVSRLLEIFKSDS--------------HGI-INVLAGSSL-KNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRV  203 (343)
T ss_dssp             HH-HHHHHHHHHHHSCC--------------SSH-HHHHHTCBC-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHHHH--------------hcc-HHHHHhhhc-CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            22 23333333332222              356 888887543 34459999999999999999999999999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCC-CccccccccccccCceEeCCCCEEEE
Q 011873          302 LAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPN-SGTFREALTEVTIDGYTIPKGFKLHW  380 (475)
Q Consensus       302 L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~-~~~~r~~~~d~~l~g~~ip~G~~v~~  380 (475)
                      |++||++|+|+++|+                        +|||+|+||++||+ +.++|.+.+|++++||.||||+.|.+
T Consensus       204 L~~~P~~~~~l~~E~------------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~  259 (343)
T 2rfb_A          204 IDENPDIIDDALKNR------------------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIV  259 (343)
T ss_dssp             HHHCGGGHHHHHHCH------------------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTCEEEE
T ss_pred             HHhCHHHHHHHHcCc------------------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCCEEEE
Confidence            999999999999985                        69999999999999 88899999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcce-EEEecCCcccccCc
Q 011873          381 AVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFR-WEKIIPDEKMIRNP  459 (475)
Q Consensus       381 ~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~  459 (475)
                      +.+++|+||++|+||++|+||||       ..++|||+|+|.|+|++||++|++++++.|+++|+ +++.+++..+..+.
T Consensus       260 ~~~~~~rd~~~~~dp~~F~PeR~-------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  332 (343)
T 2rfb_A          260 YLGSANRDETFFDEPDLFKIGRR-------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNK  332 (343)
T ss_dssp             CHHHHTTCTTTSSSTTSCCTTCS-------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTTTCEECSCT
T ss_pred             ChhhhCCCcccCCCccccCCCCC-------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCCccccccCc
Confidence            99999999999999999999995       46899999999999999999999999999999996 99876322333455


Q ss_pred             cCCCCCCcce
Q 011873          460 NLMPEKGLPV  469 (475)
Q Consensus       460 ~~~p~~~~~v  469 (475)
                      ..+....++|
T Consensus       333 ~~~~~~~lpv  342 (343)
T 2rfb_A          333 MVLGYDKLFL  342 (343)
T ss_dssp             TBCCEEECCB
T ss_pred             CcCCcccccc
Confidence            5555545554


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=3e-55  Score=415.86  Aligned_cols=383  Identities=18%  Similarity=0.239  Sum_probs=285.5

Q ss_pred             CCCCcccc---hhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchh----
Q 011873           36 RKGWPFIG---ETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPR----  108 (475)
Q Consensus        36 p~~~p~~G---~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~----  108 (475)
                      +.++|.+|   ....+.     .|++.+++++. ++|| |+++  .+...++|++++.+++++++.. .|++....    
T Consensus        17 ~~~~P~~~~dp~~~~~~-----~dP~~~~~~lR-~~gP-V~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~   86 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYF-----ADPYPEQETLR-EAGP-VVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSD   86 (412)
T ss_dssp             STTSCEECCCTTSHHHH-----HSCHHHHHHHH-HHCS-SEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSC
T ss_pred             CCCCCccCCCCCCHHHH-----hCcHHHHHHHH-hcCC-EEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCcccccc
Confidence            34577776   223444     68899998775 5799 9876  4556899999999999998765 33322111    


Q ss_pred             hh--hhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEe-hhhHHHHHHHHHHHH
Q 011873          109 II--ENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKV-HDLSRKFIFALCSEL  184 (475)
Q Consensus       109 ~~--~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~-~~~~~~~~~~~~~~~  184 (475)
                      ..  ....+.+.++. +|+.|+++|+++++.|+.+.++++.+.+.+.+.+++++....++++|+ .+....+...+++.+
T Consensus        87 ~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~D~v~~~~~~~~~~~i~~l  166 (412)
T 4dnj_A           87 FKKEKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKRLRDGFAAAADAKIDELLARGGNIDAIADLAEAYPLSVFPDA  166 (412)
T ss_dssp             TTTSCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTSEEETCCCCCCHHHHHHHHHH
T ss_pred             ccccccccCCCccccCChHHHHHHHhhcccccCHHHHHHhhHHHHHHHHHHHHhhhccCCCceeHHHHHhhhhHhHHHHH
Confidence            11  11222335666 999999999999999999999999999999999999876667778885 556667888888876


Q ss_pred             hhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhh
Q 011873          185 MYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEK  264 (475)
Q Consensus       185 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~  264 (475)
                       +|.+.... ..+......+.....    . ..............+    ...+.++.+..     ....+.+..++...
T Consensus       167 -~g~~~~~~-~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~l~~~~  230 (412)
T 4dnj_A          167 -MGLKQEGR-ENLLPYAGLVFNAFG----P-PNELRQSAIERSAPH----QAYVAEQCQRP-----NLAPGGFGACIHAF  230 (412)
T ss_dssp             -HTCCSTTG-GGHHHHHHHHHHHTS----C-SSHHHHHHHHTCHHH----HHHHHHHTSGG-----GSCTTSHHHHHHHT
T ss_pred             -cCCchhhh-hhhhhhhhccccccc----c-cHHHHHHHHHHHHHH----HHHHHHHHHhh-----ccccccchhhhHhh
Confidence             55543322 222222222211111    1 000111111112222    22222222111     12234455555443


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHH
Q 011873          265 NKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVI  344 (475)
Q Consensus       265 ~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  344 (475)
                       .++..++++++..++..+++||+|||+++++|++++|++||++|+||++|.                     .++.+++
T Consensus       231 -~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~---------------------~~~~~~~  288 (412)
T 4dnj_A          231 -SDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP---------------------SLARNAF  288 (412)
T ss_dssp             -TTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHH
T ss_pred             -hhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc---------------------ccccccc
Confidence             345569999999999999999999999999999999999999999998752                     4778999


Q ss_pred             HhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCc
Q 011873          345 SEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICP  424 (475)
Q Consensus       345 ~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~  424 (475)
                      +|++|++||++.+.|.+++|++|+|+.||||+.|.++.+++||||++|+||++|+||||.      ..|+|||+|+|.|+
T Consensus       289 eE~lR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~------~~~lpFG~G~r~Ci  362 (412)
T 4dnj_A          289 EEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT------SGHVGFGSGVHMCV  362 (412)
T ss_dssp             HHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCCSTTSCT
T ss_pred             ceeeeecCCcccccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC------CCCCCcCCCCcCCh
Confidence            999999999999999999999999999999999999999999999999999999999974      45899999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcc-eEEEecCCcccccCccCCCCCCcceEeee
Q 011873          425 GKEFARLKLLVFFHNLVRKF-RWEKIIPDEKMIRNPNLMPEKGLPVRLYP  473 (475)
Q Consensus       425 G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  473 (475)
                      |++||++|++++++.|+++| ++++.+ +.....+.++++.++++|+++|
T Consensus       363 G~~lA~~E~~~~l~~Ll~rf~~~~l~~-~~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          363 GQLVARLEGEVVLAALARKVAAIEIAG-PLKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             THHHHHHHHHHHHHHHHHHEEEEEECS-CCEEEECSSBEEEEECEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCCeECC-CCeeecCCCccCCcceeEEEEe
Confidence            99999999999999999999 899874 4456667788888889999987


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=3.4e-52  Score=393.85  Aligned_cols=373  Identities=14%  Similarity=0.170  Sum_probs=284.3

Q ss_pred             CChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccCchhhh--hhhcCCCCCCC-CchHHHHHHH
Q 011873           55 GCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPWLPRII--ENSFKSSPNIT-LQDEFNSLRR  131 (475)
Q Consensus        55 ~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~--~~~~g~~~~~~-~~~~~~~~R~  131 (475)
                      .+++..+.++.++.+++++....+ ...++|++++.+++++++.. .|++......  ....+...+.. |+++|+++|+
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rr  114 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRK  114 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcCch-hccCCCcccccccccccccCcccCCcHHHHHHHH
Confidence            578888887766544435555443 35789999999999998765 4543321111  11112223455 9999999999


Q ss_pred             HhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhhhhh
Q 011873          132 VIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIFALCSELMYNIHDTRTADELENLAHCIMTEFFI  210 (475)
Q Consensus       132 ~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  210 (475)
                      ++++.|+++.++++.+.+.+.+.+++++ +..++++|+...+ ..+...+++.+ +|....+ ...+...    ...+..
T Consensus       115 ll~~~Fs~~~l~~~~~~i~~~~~~lld~-l~~~g~~D~v~~~a~~l~~~vi~~l-lg~~~~d-~~~~~~~----~~~~~~  187 (417)
T 4dxy_A          115 ALDKGLNLAKIRKVEDKVREVASSLIDS-FAARGECDFAAEYAELFPVHVFMAL-ADLPLED-IPVLSEY----ARQMTR  187 (417)
T ss_dssp             HHHHHHCHHHHHTTHHHHHHHHHHHHHH-HHTTSEEEHHHHTTTTHHHHHHHHH-TTCCGGG-HHHHHHH----HHHHHS
T ss_pred             HhhhhcCHHHHHHHHHHHHHHHHHHHHH-hhhcCCeeeHHHHHhhhHHHHHHHH-cCCCHHH-HHHHHhh----hhhhcc
Confidence            9999999999999999999999999996 5555688875544 45666666654 7876543 2333332    223322


Q ss_pred             cCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhcccC
Q 011873          211 IPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILSLLLLEKNKDGEDLTESEIALKMQAVLIGAYDN  290 (475)
Q Consensus       211 ~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~t  290 (475)
                      .....+........++.+.+..++.++++++++       ...+|+++.++... .++..++++++..++..+++||+||
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~-------~~~ddl~s~L~~~~-~~~~~~~~~e~~~~~~~ll~AG~eT  259 (417)
T 4dxy_A          188 PEGNTPEEMATDLEAGNNGFYAYVDPIIRARVG-------GDGDDLITLMVNSE-INGERIAHDKAQGLISLLLLGGLDT  259 (417)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------CCCCSHHHHHHTCE-ETTEECCHHHHHHHHHHHHHHTTHH
T ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCccchhhhhcccc-ccCCccchhHHHHHHHHHHhhcccc
Confidence            222223222344456667788888888887754       45678999988754 3455699999999999999999999


Q ss_pred             hHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCccHHHHHHhhhcCCCCCCccccccccccccCce
Q 011873          291 PSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGY  370 (475)
Q Consensus       291 t~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~  370 (475)
                      |+++++|++++|++||++++++++|...+..                     ++ |.+|++++...+.|.+++|++|+|+
T Consensus       260 Ta~~l~~~~~~L~~~P~~~~~l~~e~~~~~~---------------------av-ee~~~~~~~~~~~R~a~~d~~l~G~  317 (417)
T 4dxy_A          260 VVNFLSFFMIHLARHPELVAELRSDPLKLMR---------------------GA-EEMFRRFPVVSEARMVAKDQEYKGV  317 (417)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHCHHHHHH---------------------TH-HHHHHHSCCBEEEEEECSCEEETTE
T ss_pred             hhhHHHHHHHHHHhCchhhhhhccCcccccc---------------------ce-eeeeccccccccccccccceEecCc
Confidence            9999999999999999999999998776532                     23 4444455566788999999999999


Q ss_pred             EeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhcc-eEEEe
Q 011873          371 TIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF-RWEKI  449 (475)
Q Consensus       371 ~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~  449 (475)
                      .||||+.|.++.+++||||++|+||++|+|+|      .+..|+|||+|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       318 ~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR------~~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~  391 (417)
T 4dxy_A          318 FLKRGDMILLPTALHGLDDAANPEPWKLDFSR------RSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFK  391 (417)
T ss_dssp             EECTTCEEEEETHHHHTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEEC
T ss_pred             cccCCCEEEEeehhhcCChhhCCCccccCCCC------CCCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeC
Confidence            99999999999999999999999999999999      345689999999999999999999999999999999 99998


Q ss_pred             cCCcccccCccCCCCCCcceEee
Q 011873          450 IPDEKMIRNPNLMPEKGLPVRLY  472 (475)
Q Consensus       450 ~~~~~~~~~~~~~p~~~~~v~~~  472 (475)
                      +++.....+.+++....++|++-
T Consensus       392 ~~~~~~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          392 EGETPIYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             TTCCCEEECSSBCEEECCEEECC
T ss_pred             CCCCeeecCCcccCceeeeEEee
Confidence            66665666667777777888874


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=3.9e-50  Score=371.01  Aligned_cols=333  Identities=13%  Similarity=0.117  Sum_probs=229.9

Q ss_pred             CCCC-CCCCcccchhhhhhhccccCChhHHHHHHHHhhcCcceeeccCCCcEEEecCcccchhhhccCCcccccC---ch
Q 011873           32 LPPG-RKGWPFIGETLEYHALSKKGCIEKFMSQRMQKYSSKIFKTSYLGADMVFLCSAEGNKLLFSNEHKLFKPW---LP  107 (475)
Q Consensus        32 ~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~vf~i~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~---~~  107 (475)
                      +||| +.+||++|+...+.......+++.++.+++++  + |+++.   .+.++|++++.+++++.++  .|++.   ..
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--p-V~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~  106 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--G-VRRSR---TETWVVADHATARQVLDDP--AFTRATGRTP  106 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--C-EEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCC
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--C-ceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccc
Confidence            5677 33689999876653222236889999988765  8 99865   4589999999999999874  34432   11


Q ss_pred             hh-------hhhhcCCCCCCC-CchHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHhhhcCCCcEEehhhH-HHHHH
Q 011873          108 RI-------IENSFKSSPNIT-LQDEFNSLRRVIGSFTEPNALRRYVGMMDANAKRHLRKYWDGNDVVKVHDLS-RKFIF  178 (475)
Q Consensus       108 ~~-------~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~  178 (475)
                      ..       ... ++. +++. +++.|       ++.|+     + .+.+.+.+.+++++ +.  +++|+...+ ..+.+
T Consensus       107 ~~~~~~~~~~~~-~~~-~l~~~dg~~H-------~~~Ft-----~-~~~i~~~~~~ll~~-~~--g~~Dl~~~~a~~l~~  168 (381)
T 2yjn_B          107 EWMRAAGAPPAE-WAQ-PFRDVHAASW-------EGEVP-----D-VGELAESFAGLLPG-AG--ARLDLVGDFAWQVPV  168 (381)
T ss_dssp             HHHHHHTCCHHH-HTH-HHHHHHHCCC-------CSCCC-----C-CSCHHHHTSTTSCC---------CCCCCCTHHHH
T ss_pred             ccccccccccch-hhh-hhhhCCchhh-------hhccC-----C-hHHHHHHHHHHHHh-cc--CcchHHHHHHHHHHH
Confidence            11       111 232 4555 88888       67787     3 67778888777775 44  478988665 69999


Q ss_pred             HHHHHHhhcCCCCchhHHHHHHHHHHHhhhhhcCcCCCCcccchhhhhhhHHHHHHHHHHHHHHHHHhhccCCCcccHHH
Q 011873          179 ALCSELMYNIHDTRTADELENLAHCIMTEFFIIPVNIPGTKFGRAVRAGREFHQRFRNMIKQRRLEIEEKREPEHKDILS  258 (475)
Q Consensus       179 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~  258 (475)
                      ++++.+ ||.+.++.  ++.+   .+...+. .+  ++.   ...    ++..+                       .+.
T Consensus       169 ~vi~~l-~G~~~~~~--~~~~---~~~~~~~-~~--~~~---~~~----~~~~~-----------------------~~~  209 (381)
T 2yjn_B          169 QGMTAV-LGAAGVLR--GAAW---DARVSLD-AQ--LSP---QQL----AVTEA-----------------------AVA  209 (381)
T ss_dssp             HHHHTC------CCH--HHHH---HHTTHHH-HT--TSC---CCH----HHHHH-----------------------HHH
T ss_pred             HHHHHH-cCCCHHHH--HHHH---HHHHhcc-CC--CCH---HHH----HHHHH-----------------------HHH
Confidence            999995 99876543  2221   1111110 00  000   000    00000                       000


Q ss_pred             HHHhhhccCCCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCCCCChhhhccCc
Q 011873          259 LLLLEKNKDGEDLTESEIALKMQAVLIGAYDNPSIAISTIIKFLAELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMK  338 (475)
Q Consensus       259 ~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~kl~~E~~~~~~~~~~~~~~~~~~l~~lp  338 (475)
                      .++           .    .++..+++||+|||+++++|++++|++||+++++|++|++                     
T Consensus       210 ~l~-----------~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------  253 (381)
T 2yjn_B          210 ALP-----------A----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA---------------------  253 (381)
T ss_dssp             HCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC---------------------
T ss_pred             HHH-----------H----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH---------------------
Confidence            011           0    6788999999999999999999999999999999998742                     


Q ss_pred             cHHHHHHhhhcCCCCCCccccccccccccCceEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCC
Q 011873          339 YTWNVISEVLRMEPPNSGTFREALTEVTIDGYTIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGA  418 (475)
Q Consensus       339 ~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~Fg~  418 (475)
                      |++++|+|+||++||++.+.|.+++|++|+|+.||||+.|.++.+++|+||++|+||++|+|+||.+     ..++|||+
T Consensus       254 ~l~~~i~E~LR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~-----~~~l~FG~  328 (381)
T 2yjn_B          254 AAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA-----DRALSAHR  328 (381)
T ss_dssp             --HHHHHHHHHHSCSCSEEEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC-----CCCCC---
T ss_pred             HHHHHhCeeeeecCCCcceeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC-----CCccCCCC
Confidence            8999999999999999988899999999999999999999999999999999999999999999974     46999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcc-eEEEecCCcccccCccCCCCCCcceEe
Q 011873          419 GPHICPGKEFARLKLLVFFHNLVRKF-RWEKIIPDEKMIRNPNLMPEKGLPVRL  471 (475)
Q Consensus       419 G~r~C~G~~~a~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~p~~~~~v~~  471 (475)
                      | |.|+|+++|.+|++++++.|+++| ++++.+++..+..+.+.++..+++|++
T Consensus       329 G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~~~~~~~~~~r~~~~LpV~l  381 (381)
T 2yjn_B          329 G-HPGRLEELVTALATAALRAAAKALPGLTPSGPVVRRRRSPVLRGTNRCPVEL  381 (381)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHTTTTCCC-----CCEECTTCSSSCCEEECCCC-
T ss_pred             C-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCCcccccCcccCCCccceeeC
Confidence            9 999999999999999999999999 999976553344456777777777764


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=36.90  E-value=30  Score=16.32  Aligned_cols=13  Identities=8%  Similarity=0.212  Sum_probs=10.0

Q ss_pred             HHHHHHHHHHHHH
Q 011873          307 EIYEQVLREQMEI  319 (475)
Q Consensus       307 ~~~~kl~~E~~~~  319 (475)
                      ..|.|+|.|+++-
T Consensus         8 nlqkkirkelkqr   20 (26)
T 1m46_B            8 NLQKKIRKELKQR   20 (26)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5789999988753


No 79 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=24.42  E-value=40  Score=28.68  Aligned_cols=30  Identities=20%  Similarity=0.409  Sum_probs=23.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCC--------------CCCCCCC
Q 011873          373 PKGFKLHWAVNATHKDPECFPNP--------------EKFDPSR  402 (475)
Q Consensus       373 p~G~~v~~~~~~~~~d~~~~~dp--------------~~F~P~R  402 (475)
                      |.||.|+.....-+.||+.|.+|              -.|||.+
T Consensus        64 ~~GTLvmPt~t~~~~dp~~w~~ppvp~~~~~~ir~~~p~fDp~~  107 (268)
T 3ijw_A           64 EEGTIIMPTQSSDLSDPKHWSRPPVPEEWWQIIRDNVPAFEPHI  107 (268)
T ss_dssp             TTSEEEEECCCGGGSCGGGCCSSCCCHHHHHHHHHHSCCBCTTT
T ss_pred             CCCeEEEeccccccCChhhhcCCCCcHHHHHHHHhhCCCCCccc
Confidence            68988888877778899999766              4688875


No 80 
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=21.71  E-value=50  Score=28.25  Aligned_cols=24  Identities=21%  Similarity=0.286  Sum_probs=18.9

Q ss_pred             eCCCCEEEEeccccccCCCCCCCC
Q 011873          372 IPKGFKLHWAVNATHKDPECFPNP  395 (475)
Q Consensus       372 ip~G~~v~~~~~~~~~d~~~~~dp  395 (475)
                      =|.||.|+.....-+-||..|.+|
T Consensus        61 g~~GTLvmPtft~~~~dp~~w~~~   84 (273)
T 2nyg_A           61 TEEGTIVMPSQSVELSDPKEWGNP   84 (273)
T ss_dssp             TTTSEEEEECCCTTSSCGGGCCSS
T ss_pred             CCCCeEEEeccccccCChhhhcCC
Confidence            368988888777778888888765


No 81 
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=20.39  E-value=1.1e+02  Score=16.13  Aligned_cols=15  Identities=20%  Similarity=0.326  Sum_probs=8.5

Q ss_pred             ChhHHHHHHHHHHHH
Q 011873            1 MEFIILSLLLLSLAL   15 (475)
Q Consensus         1 m~~~~~~~~~~~~~~   15 (475)
                      |+.++++++++..+.
T Consensus         1 MEa~vYt~ll~~tlg   15 (32)
T 3arc_T            1 METITYVFIFACIIA   15 (32)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHH
Confidence            566666666554433


Done!