Query 011874
Match_columns 475
No_of_seqs 216 out of 1183
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:05:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011874.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011874hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 1E-103 4E-108 810.4 40.4 350 97-455 2-357 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 1.6E-99 5E-104 781.0 25.5 350 96-455 4-359 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 4.2E-82 1.4E-86 639.2 33.6 301 97-424 3-309 (310)
4 2xvy_A Chelatase, putative; me 100.0 5.4E-33 1.8E-37 273.4 16.4 221 176-424 28-266 (269)
5 2jh3_A Ribosomal protein S2-re 100.0 5.1E-30 1.7E-34 271.9 12.9 237 162-427 9-269 (474)
6 2xwp_A Sirohydrochlorin cobalt 99.9 9.6E-25 3.3E-29 215.0 23.8 230 163-424 9-257 (264)
7 3lyh_A Cobalamin (vitamin B12) 99.0 2E-09 6.9E-14 93.9 11.9 111 163-280 12-123 (126)
8 3lyh_A Cobalamin (vitamin B12) 99.0 7.7E-09 2.6E-13 90.3 14.2 117 287-425 6-123 (126)
9 1tjn_A Sirohydrochlorin cobalt 98.9 7.5E-10 2.6E-14 100.8 5.9 114 163-280 31-149 (156)
10 2xws_A Sirohydrochlorin cobalt 98.9 1.5E-09 5.2E-14 95.0 6.9 110 163-280 10-128 (133)
11 2xws_A Sirohydrochlorin cobalt 98.8 2.3E-08 8E-13 87.4 9.9 118 287-425 4-128 (133)
12 1tjn_A Sirohydrochlorin cobalt 98.6 2.8E-07 9.5E-12 83.8 10.3 118 287-425 25-149 (156)
13 2xvy_A Chelatase, putative; me 98.4 2.1E-06 7.3E-11 83.7 12.7 126 286-425 9-141 (269)
14 2xwp_A Sirohydrochlorin cobalt 98.0 1.3E-05 4.4E-10 78.4 9.7 105 163-279 144-257 (264)
15 2h1v_A Ferrochelatase; rossman 98.0 2.8E-05 9.7E-10 78.0 11.0 110 293-425 51-167 (310)
16 1lbq_A Ferrochelatase; rossman 98.0 3.7E-05 1.3E-09 79.0 11.4 113 293-425 68-188 (362)
17 2jh3_A Ribosomal protein S2-re 97.8 2.2E-05 7.6E-10 83.4 6.2 121 287-425 4-136 (474)
18 3hcn_A Ferrochelatase, mitocho 97.7 0.00018 6.3E-09 73.8 11.0 105 313-425 73-183 (359)
19 4b4o_A Epimerase family protei 55.0 25 0.00085 33.1 7.1 36 99-136 211-248 (298)
20 1pq4_A Periplasmic binding pro 50.0 99 0.0034 29.9 10.6 131 258-418 132-280 (291)
21 3bdk_A D-mannonate dehydratase 49.6 15 0.00051 37.7 4.7 65 344-410 26-91 (386)
22 3hh8_A Metal ABC transporter s 44.8 1.7E+02 0.0058 28.3 11.4 199 168-419 53-285 (294)
23 2hl0_A Threonyl-tRNA synthetas 42.0 65 0.0022 28.6 7.0 44 359-403 70-116 (143)
24 3ff4_A Uncharacterized protein 40.9 19 0.00065 30.8 3.3 38 349-397 70-107 (122)
25 1t5b_A Acyl carrier protein ph 40.4 1.4E+02 0.0048 26.0 9.3 30 165-194 9-40 (201)
26 1tz9_A Mannonate dehydratase; 37.8 59 0.002 32.1 6.9 64 344-409 16-81 (367)
27 2itb_A TRNA-(MS(2)IO(6)A)-hydr 35.4 3.2 0.00011 39.2 -2.7 57 254-315 47-103 (206)
28 2xio_A Putative deoxyribonucle 35.0 3E+02 0.01 26.1 11.5 31 193-223 19-49 (301)
29 3cx3_A Lipoprotein; zinc-bindi 34.1 95 0.0032 29.8 7.6 136 258-420 119-277 (284)
30 3p6l_A Sugar phosphate isomera 32.0 2E+02 0.007 26.1 9.3 60 352-421 67-126 (262)
31 3gi1_A LBP, laminin-binding pr 31.2 1.5E+02 0.0051 28.5 8.5 136 258-419 121-278 (286)
32 1olt_A Oxygen-independent copr 29.3 4.7E+02 0.016 26.6 15.2 139 265-421 84-231 (457)
33 3rpe_A MDAB, modulator of drug 29.2 2.7E+02 0.0091 25.9 9.5 70 169-244 42-111 (218)
34 1uta_A FTSN, MSGA, cell divisi 28.9 32 0.0011 26.7 2.5 46 173-218 20-74 (81)
35 3flu_A DHDPS, dihydrodipicolin 28.4 4E+02 0.014 25.5 11.5 93 309-416 59-158 (297)
36 2yxb_A Coenzyme B12-dependent 28.0 84 0.0029 27.7 5.5 103 101-219 20-126 (161)
37 2qv5_A AGR_C_5032P, uncharacte 27.2 4.2E+02 0.014 25.4 12.7 88 189-276 54-153 (261)
38 2prs_A High-affinity zinc upta 24.5 1E+02 0.0034 29.6 5.8 136 258-419 116-274 (284)
39 3pl5_A SMU_165, putative uncha 23.9 4.8E+02 0.016 25.6 10.7 112 198-323 96-222 (320)
40 3rot_A ABC sugar transporter, 23.8 4.2E+02 0.014 24.2 12.4 54 170-225 16-72 (297)
41 1bqc_A Protein (beta-mannanase 23.5 4.4E+02 0.015 24.6 10.2 81 287-375 79-170 (302)
42 3dmy_A Protein FDRA; predicted 23.2 58 0.002 34.3 4.1 43 347-397 46-88 (480)
43 2amj_A Modulator of drug activ 22.8 4.1E+02 0.014 23.7 10.1 69 170-244 30-98 (204)
44 1x60_A Sporulation-specific N- 22.8 74 0.0025 24.2 3.6 44 173-216 20-72 (79)
45 3cpr_A Dihydrodipicolinate syn 22.6 5.2E+02 0.018 24.8 11.0 50 188-241 84-136 (304)
46 3fkr_A L-2-keto-3-deoxyarabona 22.5 3.8E+02 0.013 26.0 9.6 51 187-241 75-131 (309)
47 2ehh_A DHDPS, dihydrodipicolin 22.5 5.1E+02 0.017 24.7 11.0 71 166-241 47-120 (294)
48 2ejb_A Probable aromatic acid 22.3 85 0.0029 28.7 4.5 51 343-397 127-180 (189)
49 3gxh_A Putative phosphatase (D 22.0 2.6E+02 0.0089 23.9 7.5 65 351-423 30-96 (157)
50 3zqu_A Probable aromatic acid 21.5 69 0.0024 29.9 3.8 51 343-397 140-193 (209)
51 3lub_A Putative creatinine ami 21.3 1.6E+02 0.0054 28.1 6.4 20 203-222 99-118 (254)
52 1o97_C Electron transferring f 21.2 3.1E+02 0.011 26.1 8.5 50 195-245 61-110 (264)
53 3qze_A DHDPS, dihydrodipicolin 21.1 4.8E+02 0.016 25.3 10.1 70 172-245 75-147 (314)
54 3flu_A DHDPS, dihydrodipicolin 20.8 5E+02 0.017 24.9 10.1 50 188-241 75-127 (297)
55 3nyi_A FAT acid-binding protei 20.7 1.9E+02 0.0064 28.1 6.9 62 199-265 66-130 (297)
56 3mfq_A TROA, high-affinity zin 20.6 5.3E+02 0.018 24.5 10.1 120 256-397 101-240 (282)
57 2o1e_A YCDH; alpha-beta protei 20.4 3.7E+02 0.013 26.0 9.1 134 164-324 52-186 (312)
58 2fqx_A Membrane lipoprotein TM 20.4 5.4E+02 0.019 24.2 10.5 50 171-222 21-70 (318)
59 3m5v_A DHDPS, dihydrodipicolin 20.4 5.7E+02 0.02 24.5 13.1 95 309-417 59-160 (301)
60 3nco_A Endoglucanase fncel5A; 20.3 5.3E+02 0.018 24.3 10.1 133 200-371 40-179 (320)
61 3daq_A DHDPS, dihydrodipicolin 20.1 2.3E+02 0.008 27.2 7.5 94 309-417 54-154 (292)
62 3si9_A DHDPS, dihydrodipicolin 20.0 3E+02 0.01 26.9 8.3 136 254-417 28-174 (315)
63 1sbz_A Probable aromatic acid 20.0 63 0.0022 29.9 3.2 51 343-397 123-176 (197)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=1.1e-103 Score=810.39 Aligned_cols=350 Identities=41% Similarity=0.656 Sum_probs=332.4
Q ss_pred CCcEEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHHH
Q 011874 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (475)
Q Consensus 97 ~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~Vi~lP~~~~~~~~~L~~~Ia~~R~~k~~~~Y~~IGggSPL~~~T~~qa 176 (475)
++|+||||||||||++++||++||+|||+|++||++|. |++|+++|+++|++|++++|+.|||||||+.||++|+
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~ 76 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG 76 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 57899999999999999999999999999999999992 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHHhccCCCCC
Q 011874 177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (475)
Q Consensus 177 ~~L~~~L~~~~---~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~ 253 (475)
++|++.|++.+ .+++|++|||||+|+|+|++++|+++|+++|++||||||||++||||+++++.+.+++....+.++
T Consensus 77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~ 156 (359)
T 3hcn_A 77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK 156 (359)
T ss_dssp HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence 99999998764 468999999999999999999999999999999999999999999999999999988866566778
Q ss_pred EEEeccCCCChHHHHHHHHHHHHHHhhcCC--CCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCC
Q 011874 254 VSIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 331 (475)
Q Consensus 254 v~~I~~~~~~p~yI~ala~~I~~~l~~~~~--~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~ 331 (475)
+++|++|++||+||+|++++|+++|++++. +++++|||||||+|+++++ +||||+.||++|+++|+++| |+.++
T Consensus 157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~-~GDpY~~q~~~t~~lv~e~L---g~~~~ 232 (359)
T 3hcn_A 157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVN-RGDPYPQEVSATVQKVMERL---EYCNP 232 (359)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCSC
T ss_pred eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcc-cCCCHHHHHHHHHHHHHHHc---CCCCC
Confidence 999999999999999999999999998754 2457999999999999995 79999999999999999999 77667
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHH-HHHHHHcCCceEEEcCCCCCCHH
Q 011874 332 HTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEY-KELALESGIENWGRVPALNCTPS 410 (475)
Q Consensus 332 ~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~-re~a~e~G~~~~~rvp~LNdsp~ 410 (475)
|.++||||+||.+||+|+|+|+|++|+++|+|+|+|+||||++||+|||||||+|+ +++|+++|+++|.|+|||||||.
T Consensus 233 ~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~~~~rip~LNd~p~ 312 (359)
T 3hcn_A 233 YRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPL 312 (359)
T ss_dssp EEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCCEEEECCCSTTCHH
T ss_pred EEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCceEEEcCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999 58899999989999999999999
Q ss_pred HHHHHHHHHHHHcCCccccCCCCCCCCCCCCChhHHHHHHHHHHH
Q 011874 411 FITDLADAVIEALPSALAMSAPKNISQEDDHNPVRYAIKMFFGSI 455 (475)
Q Consensus 411 fI~aLadlV~e~l~~~~~~~~~~~~~c~~c~~~~~~~~k~~~~~~ 455 (475)
||++|+++|.+++++++.+|+|+.++||+|+|++|..+|.||+++
T Consensus 313 fi~~La~lv~~~l~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~ 357 (359)
T 3hcn_A 313 FSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQ 357 (359)
T ss_dssp HHHHHHHHHHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhcCCccCcccCCCCCCCCchhhHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999864
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=1.6e-99 Score=780.97 Aligned_cols=350 Identities=35% Similarity=0.568 Sum_probs=331.0
Q ss_pred CCCcEEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHH
Q 011874 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (475)
Q Consensus 96 ~~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~Vi~lP~~~~~~~~~L~~~Ia~~R~~k~~~~Y~~IGggSPL~~~T~~q 175 (475)
+++|+||||||||||++++||++||+|||+|++||++|++ +|++|+++|+++|++|++++|+.|||||||+.+|++|
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~---~~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q 80 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAK---YQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQ 80 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSS---SHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHH---HHHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHH
Confidence 5688999999999999999999999999999999999976 3568999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---CCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHHhccCCCC
Q 011874 176 AQALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRL 252 (475)
Q Consensus 176 a~~L~~~L~~~~---~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~ 252 (475)
+++|++.|++.+ .+++|++|||||+|+|+|++++|+++|+++|++||||||||++|||++.+++.+++++....+.+
T Consensus 81 ~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i 160 (362)
T 1lbq_A 81 ATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSI 160 (362)
T ss_dssp HHHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCc
Confidence 999999998754 57999999999999999999999999999999999999999999999999999999887666788
Q ss_pred CEEEeccCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCC
Q 011874 253 PVSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINN 330 (475)
Q Consensus 253 ~v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~--~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~ 330 (475)
++++|++||+||.||+|++++|++++++++.+ ++++|||||||+|+++++ +||||..||++|+++|+++| |+..
T Consensus 161 ~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~-~GDpY~~q~~~ta~ll~e~l---g~~~ 236 (362)
T 1lbq_A 161 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVN-TGDAYPAEVAATVYNIMQKL---KFKN 236 (362)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCS
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCcccccc-CCCcHHHHHHHHHHHHHHHc---CCCC
Confidence 89999999999999999999999999987543 567999999999999995 79999999999999999999 7755
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHH
Q 011874 331 DHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPS 410 (475)
Q Consensus 331 ~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~ 410 (475)
+|.++||||+||.+||+|+|+|+|++| ++|+|+|+|+||||++||+|||||||+|++++|+++|. |.|+||||+||.
T Consensus 237 ~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~gFvsD~lETL~eid~e~~e~~~~~G~--~~~~p~Ln~~p~ 313 (362)
T 1lbq_A 237 PYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDK--FKRCESLNGNQT 313 (362)
T ss_dssp CEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGG--EEECCCCTTCHH
T ss_pred CEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECCeechhhHhhHHHHHHHHHHHHHhCCC--EEEcCCCCCCHH
Confidence 799999999999999999999999999 99999999999999999999999999999999999994 999999999999
Q ss_pred HHHHHHHHHHHHcCCccccCCCCCCCCCCC-CChhHHHHHHHHHHH
Q 011874 411 FITDLADAVIEALPSALAMSAPKNISQEDD-HNPVRYAIKMFFGSI 455 (475)
Q Consensus 411 fI~aLadlV~e~l~~~~~~~~~~~~~c~~c-~~~~~~~~k~~~~~~ 455 (475)
||++|+++|.+++.+...++.|..++||+| +|++|...|.||+++
T Consensus 314 fi~~L~~lv~~~l~~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~ 359 (362)
T 1lbq_A 314 FIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNH 359 (362)
T ss_dssp HHHHHHHHHHHHHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBCC
T ss_pred HHHHHHHHHHHHhccCCCcccccCCCCCCCCcCchhhhHHHHhhcc
Confidence 999999999999999899999999999999 799999999999753
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=4.2e-82 Score=639.22 Aligned_cols=301 Identities=29% Similarity=0.495 Sum_probs=281.4
Q ss_pred CCcEEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHHH
Q 011874 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (475)
Q Consensus 97 ~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~Vi~lP~~~~~~~~~L~~~Ia~~R~~k~~~~Y~~IGggSPL~~~T~~qa 176 (475)
++|+||||+|||||++++||++||+|+|+|+. +| ++|++|++++|+.|||||||+.+|++|+
T Consensus 3 ~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~---~~---------------~~r~~~~~~~Y~~ig~gSPl~~~t~~q~ 64 (310)
T 2h1v_A 3 RKKMGLLVMAYGTPYKEEDIERYYTHIRRGRK---PE---------------PEMLQDLKDRYEAIGGISPLAQITEQQA 64 (310)
T ss_dssp CEEEEEEEEECCCCSSGGGHHHHHHHHTTTCC---CC---------------HHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCChHHHHHHHHHHhcCCC---CC---------------hHHHHHHHHHHHHCCCCChhHHHHHHHH
Confidence 56899999999999999999999999999864 24 3467899999999999999999999999
Q ss_pred HHHHHHHHhcCC--CceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHHhccCCCCCE
Q 011874 177 QALKTALEAKNL--PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPV 254 (475)
Q Consensus 177 ~~L~~~L~~~~~--~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~v 254 (475)
++|++.|+++++ +++|++|||||+|+|+|++++|+++|+++|+++|||||||++|||++.+++.+++++.. .+++
T Consensus 65 ~~L~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~~~---~~~i 141 (310)
T 2h1v_A 65 HNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG---GLTI 141 (310)
T ss_dssp HHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHC---SCEE
T ss_pred HHHHHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHhCC---CCeE
Confidence 999999988764 79999999999999999999999999999999999999999999999999999887753 4679
Q ss_pred EEeccCCCChHHHHHHHHHHHHHHhhcCC--CCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCe
Q 011874 255 SIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDH 332 (475)
Q Consensus 255 ~~I~~~~~~p~yI~ala~~I~~~l~~~~~--~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~ 332 (475)
++|++|++||.||++++++|++++++++. +++++|||||||+|+++++ +||||+.||++|+++|+++| |+ .+|
T Consensus 142 ~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~-~gDpY~~~~~~t~~~l~e~l---~~-~~~ 216 (310)
T 2h1v_A 142 TSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE-FGDPYPDQLHESAKLIAEGA---GV-SEY 216 (310)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGG-GTCCHHHHHHHHHHHHHHHH---TC-SCE
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhcc-CCCChHHHHHHHHHHHHHHc---CC-CCE
Confidence 99999999999999999999999987753 3567999999999999985 79999999999999999999 76 689
Q ss_pred EEEEeCC-CCCCCCCCCCHHHHHHHhhhc-CCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHH
Q 011874 333 TLAYQSR-VGPVKWLKPYTDEVLVELGQK-GVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPS 410 (475)
Q Consensus 333 ~lafQSr-~Gp~~WL~P~t~d~L~~L~~~-G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~ 410 (475)
.++|||+ +|+.+||+|+|+++|++|+++ |+|+|+|+||||++||+|||+|||+|+++.|+++|. +|.|+||||+||.
T Consensus 217 ~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~F~sD~lEtl~ei~~e~~e~~~~~G~-~~~~~p~ln~~p~ 295 (310)
T 2h1v_A 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVVTDDIGA-SYYRPEMPNAKPE 295 (310)
T ss_dssp EEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTTCCSSCHHHHTTTTTHHHHHHHHHTC-EEECCCCCTTCHH
T ss_pred EEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCcccccceeeHHHHHHHHHHHHHHcCC-eEEECCCCCCCHH
Confidence 9999997 999999999999999999999 999999999999999999999999999999999995 6999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 011874 411 FITDLADAVIEALP 424 (475)
Q Consensus 411 fI~aLadlV~e~l~ 424 (475)
|+++|+++|.++++
T Consensus 296 ~i~~l~~~v~~~l~ 309 (310)
T 2h1v_A 296 FIDALATVVLKKLG 309 (310)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999874
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=100.00 E-value=5.4e-33 Score=273.37 Aligned_cols=221 Identities=18% Similarity=0.178 Sum_probs=177.9
Q ss_pred HHHHHHHHHhcCCCceEEEeeec------------cCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHH-
Q 011874 176 AQALKTALEAKNLPVNVYVGMRY------------WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI- 242 (475)
Q Consensus 176 a~~L~~~L~~~~~~~~V~~amrY------------~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~- 242 (475)
.+++++.|.+..++++|+.||.+ ++|++++++++|+++|+++|+++||||+ +|+..+++.+.
T Consensus 28 ~~~~~~~l~~~~~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l~-----~G~~~~di~~~~ 102 (269)
T 2xvy_A 28 LDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTI-----PGEEFHGLLETA 102 (269)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCSS-----SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEeceee-----ccHhHHHHHHHH
Confidence 34444444444567899999997 8999999999999999999999999993 55677788877
Q ss_pred --HHHhccCCCCCEEEeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHH
Q 011874 243 --FREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIM 320 (475)
Q Consensus 243 --~~~~~~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~ 320 (475)
+++... ...+++++++|++||.|+++++++|++.+.... +++..|||++||+|. .||++.. ++++++.
T Consensus 103 ~~l~~~~~-~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~-----~~~~~~~---~~a~~l~ 172 (269)
T 2xvy_A 103 HAFQGLPK-GLTRVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH-----PADICYP---GLQYYLW 172 (269)
T ss_dssp HHHTTCTT-SCSEEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS-----GGGGHHH---HHHHHHH
T ss_pred HHHHHhhc-cCCeEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh-----hhccHHH---HHHHHHH
Confidence 443221 125799999999999999999999999885421 234579999999995 2555433 3555553
Q ss_pred HHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEcccccc-cchh--hHHHHHHHHHHHHHHcCCc
Q 011874 321 QRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVS-EHIE--TLEEIDMEYKELALESGIE 397 (475)
Q Consensus 321 e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvs-DhlE--TL~EIDiE~re~a~e~G~~ 397 (475)
+ + | ..+|+ |..+| +|+++++|++|.++|+|+|+|+|++|++ ||+| +.+|++.++++.+.+.|++
T Consensus 173 ~-~---~-----~~~~~---g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~~G~h~~~di~~~~~~~~~~~~~~~g~~ 239 (269)
T 2xvy_A 173 R-L---D-----PDLLV---GTVEG-SPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIE 239 (269)
T ss_dssp T-T---C-----TTEEE---EESSS-SSCHHHHHHHHHHHTCSEEEEEEESSSCCHHHHTTTTCSSTTSHHHHHHHTTCE
T ss_pred h-c---C-----CCEEE---EEcCC-CCCHHHHHHHHHHCCCCEEEEECCccccccchhhhcCCCchhHHHHHHHHcCcE
Confidence 3 2 3 24563 45678 8999999999999999999999999886 9999 7888899999999999998
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHcC
Q 011874 398 NWGRVPALNCTPSFITDLADAVIEALP 424 (475)
Q Consensus 398 ~~~rvp~LNdsp~fI~aLadlV~e~l~ 424 (475)
.+.++||||+||.|+++|++++.+.+.
T Consensus 240 ~~~~~~~Lg~~p~~~~~l~~~~~~a~~ 266 (269)
T 2xvy_A 240 AKPVLHGTAESDAVAAIWLRHLDDALA 266 (269)
T ss_dssp EEECCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 777999999999999999999998764
No 5
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.96 E-value=5.1e-30 Score=271.95 Aligned_cols=237 Identities=15% Similarity=0.117 Sum_probs=195.8
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHhcCC-----CceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHH
Q 011874 162 IGGGSPLRKITDEQAQALKTALEAKNL-----PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 236 (475)
Q Consensus 162 IGggSPL~~~T~~qa~~L~~~L~~~~~-----~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~ 236 (475)
+|-|||+...++++.++|++.|.+.++ +..|++||..++|++++++++| |+++|+++|+|++++..+..
T Consensus 9 VgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~G~H~~~--- 82 (474)
T 2jh3_A 9 IGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSEGYVTET--- 82 (474)
T ss_dssp EECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCCSHHHHT---
T ss_pred EeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhccHhHHH---
Confidence 477899999999999999999987665 7899999988999999999999 99999999999988876553
Q ss_pred HHHHHHHHHhc-----------cCCCCCEEEeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccC
Q 011874 237 RVLQNIFREDA-----------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAG 305 (475)
Q Consensus 237 ~~l~~~~~~~~-----------~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~G 305 (475)
++.+.+.+.. ..+.+.+.++++|+.||.|+++++++|+++++.-..++++.|||++
T Consensus 83 -DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg------------ 149 (474)
T 2jh3_A 83 -VLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA------------ 149 (474)
T ss_dssp -HHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE------------
T ss_pred -HHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec------------
Confidence 4444443321 2345679999999999999999999999998651123456777775
Q ss_pred CC-hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCC-----CCCCCCCHHHHHHHhhhcCCceEEEEcccccccchhh
Q 011874 306 DP-YRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGP-----VKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIET 379 (475)
Q Consensus 306 Dp-Y~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp-----~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlET 379 (475)
|| |..+|.+++++|++++ |+ .+|.++|||+ +| .+||+|++++++++| |+|+|+|+|+ |++||+||
T Consensus 150 dp~a~~~~~~la~~L~e~l---g~-~~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~-Fl~dG~h~ 220 (474)
T 2jh3_A 150 ARPGNAALETHAQALRERG---QF-AGVEVVLESR-EALTPESHAASAVPLSEWPSRV---EAGQAVLVPF-LTHLGKHA 220 (474)
T ss_dssp SSTTCHHHHHHHHHHHHHC---CS-SEEEEEECCC-C---------CCEEGGGGGGGC---CSSCEEEEEC-SSCCCHHH
T ss_pred CchHHHHHHHHHHHHHHhc---CC-CcEEEEEEeC-CCCCCcccccccCCHHHHHHHc---CCCeEEEEEe-eccCCcch
Confidence 55 4789999999999998 76 3799999998 55 468888999999998 9999999998 99999999
Q ss_pred HHHHHHHHHHHHHH--cCCceEEEcCCCCCCHHHHHHHHHHHHHHcCCcc
Q 011874 380 LEEIDMEYKELALE--SGIENWGRVPALNCTPSFITDLADAVIEALPSAL 427 (475)
Q Consensus 380 L~EIDiE~re~a~e--~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~~~ 427 (475)
++||+.+.++.+.+ .|. ++.++++||+||.|+++|++++.+++.+..
T Consensus 221 ~~DI~~~~~~~~~~~p~G~-~v~~~~~LG~~p~~~~ll~~rv~eal~~~~ 269 (474)
T 2jh3_A 221 AERLQQALAQAAERFPQAP-PLHVGGPVGEHPAVAEVVLALAAEGREDER 269 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCC-CEEECCCGGGSTTHHHHHHHHHHTTCSCSC
T ss_pred HHHHHHHHHHHHHhccCCc-EEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 99999998766655 355 689999999999999999999999987653
No 6
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.93 E-value=9.6e-25 Score=215.00 Aligned_cols=230 Identities=13% Similarity=0.167 Sum_probs=180.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEEee-----------ec--cCCCHHHHHHHHHHCCCCEEEEEecCCcccc
Q 011874 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-----------RY--WYPFTEEAVQQIKRDRITRLVVLPLYPQFSI 229 (475)
Q Consensus 163 GggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am-----------rY--~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~ 229 (475)
+-||....+.++..+++.+.+.+..++++|+.|| || ..|+++++|++|.++|+++|+++|||+
T Consensus 9 ~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l---- 84 (264)
T 2xwp_A 9 SFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI---- 84 (264)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS----
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc----
Confidence 4567666666546666666676666789999999 44 459999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHhc-cCCCCCEEEeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCCh
Q 011874 230 STTGSSIRVLQNIFREDA-YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPY 308 (475)
Q Consensus 230 sTtgS~~~~l~~~~~~~~-~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY 308 (475)
+.|+..+++.+.+++.. .++ .+++.++++.+|.+++++++.|.+.+... +++..|||++||+|.. +++|
T Consensus 85 -~~G~~~~di~~~v~~~~~~~~--~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~-----~~~~ 154 (264)
T 2xwp_A 85 -INGDEYEKIVREVQLLRPLFT--RLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH-----AFAA 154 (264)
T ss_dssp -SSSHHHHHHHHHHHHHGGGCS--EEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG-----GGHH
T ss_pred -cCcHHHHHHHHHHHHHHhhCC--ceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch-----hhHH
Confidence 45666677877766533 234 58899999999999999999998876542 3456899999999853 3444
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEcccccc-cchhhHHHHHHH-
Q 011874 309 RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVS-EHIETLEEIDME- 386 (475)
Q Consensus 309 ~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvs-DhlETL~EIDiE- 386 (475)
. .++++.+.+ + |. .+.+ |..+| +|++++++++|.++|+|+|+|+|+.|++ ||+ ..||..+
T Consensus 155 ~---~~~a~~l~~-~---~~--~v~~------g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~aG~h~--~~Di~~~~ 216 (264)
T 2xwp_A 155 Y---ACLDHMMTA-Q---RF--PARV------GAVES-YPEVDILIDSLRDEGVTGVHLMPLMLVAGDHA--INDMASDD 216 (264)
T ss_dssp H---HHHHHHHHH-T---TC--SEEE------EESSS-SSCHHHHHHHHHHHTCCEEEEEECSSCCCHHH--HHHHHSSS
T ss_pred H---HHHHHHHHh-h---CC--CEEE------EEeCC-CCCHHHHHHHHHHCCCCEEEEEeeecccCcch--hhhccccc
Confidence 2 334444433 3 42 4544 44568 9999999999999999999999999999 999 5566655
Q ss_pred ---HHHHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHcC
Q 011874 387 ---YKELALESGIENWGRVPALNCTPSFITDLADAVIEALP 424 (475)
Q Consensus 387 ---~re~a~e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~ 424 (475)
.++.+.+.|++...++++||+||.+++.+.+++.+.+.
T Consensus 217 ~d~~~~~~~~~g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 217 GDSWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp TTSHHHHHHHTTCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHcCCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 67888889987666889999999999999999999875
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.02 E-value=2e-09 Score=93.94 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=85.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEEee-eccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHH
Q 011874 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-RYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQN 241 (475)
Q Consensus 163 GggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am-rY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~ 241 (475)
|=||+-..+ .+..+.+.+.|.+.. ..|+.|| .++.|++++++++|.++|+++|+++|+|+.....+.......+.+
T Consensus 12 ~HGS~~~~~-~~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~~~Dip~~~~~ 88 (126)
T 3lyh_A 12 AHGSSDARW-CETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIER 88 (126)
T ss_dssp ECCCSCHHH-HHHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHHHHHHHHHHHH
T ss_pred eCCCCCHHH-HHHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCchhhhHHHHHHHH
Confidence 556765444 335666666676655 4688885 889999999999999999999999999998776665555555543
Q ss_pred HHHHhccCCCCCEEEeccCCCChHHHHHHHHHHHHHHhh
Q 011874 242 IFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (475)
Q Consensus 242 ~~~~~~~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (475)
+-++ + ++++.+.++++.||.++++++++|++++..
T Consensus 89 ~~~~---~-~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 89 LEAE---H-GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHH---H-TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHH---h-CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 3222 2 467889999999999999999999999864
No 8
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=98.99 E-value=7.7e-09 Score=90.25 Aligned_cols=117 Identities=17% Similarity=0.272 Sum_probs=89.7
Q ss_pred eEEEEecCCCchhhhhccCCCh-HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceE
Q 011874 287 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSL 365 (475)
Q Consensus 287 ~~LLFSaHglP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~V 365 (475)
..||+.+||.+. |. ...+.+.++.+.++. .++.++|-. +-.|+++++|++|.++|+++|
T Consensus 6 ~alllv~HGS~~--------~~~~~~~~~l~~~l~~~~------~~V~~a~le------~~~P~l~~~l~~l~~~G~~~v 65 (126)
T 3lyh_A 6 HQIILLAHGSSD--------ARWCETFEKLAEPTVESI------ENAAIAYME------LAEPSLDTIVNRAKGQGVEQF 65 (126)
T ss_dssp EEEEEEECCCSC--------HHHHHHHHHHHHHHHHHS------TTCEEEESS------SSSSBHHHHHHHHHHTTCCEE
T ss_pred cEEEEEeCCCCC--------HHHHHHHHHHHHHHHhhc------CCEEEEEEe------CCCCCHHHHHHHHHHcCCCEE
Confidence 479999999852 22 344555666665553 378888853 447999999999999999999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 366 LAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 366 vVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
+|+|+.++. ..++..||..+..+...+.|. ++.+.+.|+.+|.+++.|++++.+++..
T Consensus 66 vvvPlfl~~-G~H~~~Dip~~~~~~~~~~~~-~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 66 TVVPLFLAA-GRHLRKDVPAMIERLEAEHGV-TIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp EEEECCSCC-CHHHHHHHHHHHHHHHHHHTC-EEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred EEEecccCC-CchhhhHHHHHHHHHHHHhCc-eEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 999985444 466667777777666555565 6889999999999999999999998753
No 9
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.93 E-value=7.5e-10 Score=100.79 Aligned_cols=114 Identities=15% Similarity=0.143 Sum_probs=80.2
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEEe-eec-cCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHH
Q 011874 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (475)
Q Consensus 163 GggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~a-mrY-~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~ 240 (475)
|=||+-..+ .+..+++.+.|.++.+...|++| |.| +.|++++++++| |+++|+++|+|++++..++..+...+.
T Consensus 31 ~HGS~~p~~-~~~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~~G~h~~~DIp~~l~ 106 (156)
T 1tjn_A 31 GHGSQLNHY-REVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTEDLPDLLG 106 (156)
T ss_dssp ECCTTSTTH-HHHHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSSCSHHHHTHHHHHHT
T ss_pred ECCCCCHHH-HHHHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhcCCchhHhHHHHHHH
Confidence 556654332 33344555555554456789999 688 999999999999 999999999999988766554444332
Q ss_pred HHHHHhc---cCCCCCEEEeccCCCChHHHHHHHHHHHHHHhh
Q 011874 241 NIFREDA---YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (475)
Q Consensus 241 ~~~~~~~---~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (475)
+..++.. ..+.+++.+.++++.+|.++++++++|+++++.
T Consensus 107 ~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 107 FPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp CCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred HHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 2100000 235677899999999999999999999987654
No 10
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.91 E-value=1.5e-09 Score=95.00 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=81.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEEe-eec-cCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHH
Q 011874 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (475)
Q Consensus 163 GggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~a-mrY-~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~ 240 (475)
|=||+-... .+..+.+.+.|.+..+...|++| |.| +.|++++++++| |+++|+++|+|++++..+... +.
T Consensus 10 ~HGS~~~~~-~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~~G~h~~~d----i~ 81 (133)
T 2xws_A 10 GHGSQLNHY-REVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTED----LP 81 (133)
T ss_dssp ECSCCCHHH-HHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSSCCHHHHTH----HH
T ss_pred ECCCCCHHH-HHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeCCCcchHhH----HH
Confidence 556764443 33556666667666556789999 588 999999999999 999999999999887666544 44
Q ss_pred HHHHHhc-------cCCCCCEEEeccCCCChHHHHHHHHHHHHHHhh
Q 011874 241 NIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (475)
Q Consensus 241 ~~~~~~~-------~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (475)
+.+.+.. ..+.+++.+.++++.||.++++++++|+++++.
T Consensus 82 ~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 82 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred HHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 4333211 234567889999999999999999999887643
No 11
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.78 E-value=2.3e-08 Score=87.40 Aligned_cols=118 Identities=15% Similarity=0.128 Sum_probs=85.1
Q ss_pred eEEEEecCCCchhhhhccCCCh-HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceE
Q 011874 287 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSL 365 (475)
Q Consensus 287 ~~LLFSaHglP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~V 365 (475)
..||+.+||.+ ||. ...+.+.++.+.+++ +. .++.++|-+- |-.|+++++|++| |+++|
T Consensus 4 ~alllv~HGS~--------~~~~~~~~~~la~~l~~~~---~~-~~V~~a~le~-----~~~Psl~~~l~~l---g~~~v 63 (133)
T 2xws_A 4 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESG---AF-DEVKIAFAAR-----KRRPMPDEAIREM---NCDII 63 (133)
T ss_dssp EEEEEEECSCC--------CHHHHHHHHHHHHHHHHHT---SS-SEEEEEESST-----TCSSCHHHHHHHC---CCSEE
T ss_pred ceEEEEECCCC--------CHHHHHHHHHHHHHHHhhC---CC-CcEEeeeeec-----CCCCCHHHHHHHc---CCCEE
Confidence 47999999985 222 345566667776665 32 3688898662 3479999999999 99999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHH------HcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 366 LAIPVSFVSEHIETLEEIDMEYKELAL------ESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 366 vVvPigFvsDhlETL~EIDiE~re~a~------e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
+|+|+ |+..-.++-.||..+..+..+ +....++.+.+.|++||.+++.+++++.+.+..
T Consensus 64 ~v~Pl-fl~~G~h~~~di~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 64 YVVPL-FISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp EEEEC-CSSCCHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred EEEee-eeCCCcchHhHHHHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 99998 555556666676555443222 233346889999999999999999999887653
No 12
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.56 E-value=2.8e-07 Score=83.76 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=84.4
Q ss_pred eEEEEecCCCchhhhhccCCCh-HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceE
Q 011874 287 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSL 365 (475)
Q Consensus 287 ~~LLFSaHglP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~V 365 (475)
..||+.+||.+ ||. ...+.+.++.+.+++ +. .++.++|-.-.+ .|+++++|++| |+++|
T Consensus 25 ~avlLv~HGS~--------~p~~~~~~~~la~~l~~~~---~~-~~V~~afle~~~-----~Psl~~~l~~l---G~~~V 84 (156)
T 1tjn_A 25 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESG---AF-DEVKIAFAARKR-----RPMPDEAIREM---NCDII 84 (156)
T ss_dssp EEEEEEECCTT--------STTHHHHHHHHHHHHHHHT---SS-SEEEEEECSSSC-----SSCHHHHHHHC---CCSEE
T ss_pred cCEEEEECCCC--------CHHHHHHHHHHHHHHHhhC---CC-CeEEEEEecCCC-----CCCHHHHHHHc---CCCEE
Confidence 57999999984 333 556677777777775 32 368889866213 69999999999 99999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHH------HcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 366 LAIPVSFVSEHIETLEEIDMEYKELAL------ESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 366 vVvPigFvsDhlETL~EIDiE~re~a~------e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
+|+|+.++.. ..|-.||..+..+..+ +....++.+++.|+++|.++++|++++.+.+..
T Consensus 85 vVvPlfL~~G-~h~~~DIp~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 85 YVVPLFISYG-LHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp EEEECCSSCS-HHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred EEEechhcCC-chhHhHHHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999866653 2334555544443221 222346889999999999999999999987653
No 13
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=98.40 E-value=2.1e-06 Score=83.73 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=90.2
Q ss_pred ceEEEEecCCCchhhhhccCCCh-HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCC-----CCCCCCCCCHHHHHHHhhh
Q 011874 286 EVMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRV-----GPVKWLKPYTDEVLVELGQ 359 (475)
Q Consensus 286 ~~~LLFSaHglP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~-----Gp~~WL~P~t~d~L~~L~~ 359 (475)
+..||+.+||.. ||. ...+.+.++.+.+++ + ..+++++|-|+. -...|-.|++.++|++|.+
T Consensus 9 ~~aillv~hGS~--------~~~~~~~~~~~~~~l~~~~---~-~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~ 76 (269)
T 2xvy_A 9 KTGILLVAFGTS--------VEEARPALDKMGDRVRAAH---P-DIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAE 76 (269)
T ss_dssp CEEEEEEECCCC--------CTTTTHHHHHHHHHHHHHC---T-TSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred CceEEEEeCCCC--------cHHHHHHHHHHHHHHHHHC---C-CCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 357999999983 232 335666666676665 1 237889997721 0002568999999999999
Q ss_pred cCCceEEEEcccccccchhhHHHHHHHHHHHHH-HcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 360 KGVKSLLAIPVSFVSEHIETLEEIDMEYKELAL-ESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 360 ~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~-e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
+|+++|+|+|...++.+ +..+|.....++.. ..+...++.++++.+||.+++++++.+.+++..
T Consensus 77 ~G~~~ivV~Pl~l~~G~--~~~di~~~~~~l~~~~~~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~ 141 (269)
T 2xvy_A 77 EGFTHVAVQSLHTIPGE--EFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPA 141 (269)
T ss_dssp TTCCEEEEEECCSSSSH--HHHHHHHHHHHHTTCTTSCSEEEEECCSSCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCEEEEEeceeeccH--hHHHHHHHHHHHHHhhccCCeEEEeCCCCCCHHHHHHHHHHHHHhchh
Confidence 99999999999887765 34555444222321 122357999999999999999999999998853
No 14
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=98.05 E-value=1.3e-05 Score=78.42 Aligned_cols=105 Identities=14% Similarity=0.245 Sum_probs=77.9
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHH--
Q 011874 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ-- 240 (475)
Q Consensus 163 GggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~-- 240 (475)
|=|||-. .....+.++..|.+.+. .|++|+--|.|++++++++|.+.|+++|+++|++.. +-..+.+++.
T Consensus 144 gHGs~~~--~~~~~~~~a~~l~~~~~--~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l~----aG~h~~~Di~~~ 215 (264)
T 2xwp_A 144 GHGASHH--AFAAYACLDHMMTAQRF--PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLMLV----AGDHAINDMASD 215 (264)
T ss_dssp ECCCSSG--GGHHHHHHHHHHHHTTC--SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECSSC----CCHHHHHHHHSS
T ss_pred ECCCCch--hhHHHHHHHHHHHhhCC--CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeeecc----cCcchhhhcccc
Confidence 6677765 23345577777777653 899999778999999999999999999999999884 2244444443
Q ss_pred ------HHHHHhccCCCCCEE-EeccCCCChHHHHHHHHHHHHHHh
Q 011874 241 ------NIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELG 279 (475)
Q Consensus 241 ------~~~~~~~~~~~~~v~-~I~~~~~~p~yI~ala~~I~~~l~ 279 (475)
+.+.+. +..+. ++++.+.||.+++++.+++++++.
T Consensus 216 ~~d~~~~~~~~~----g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 216 DGDSWKMRFNAA----GIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp STTSHHHHHHHT----TCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHc----CCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 223322 22332 578999999999999999999885
No 15
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=97.98 E-value=2.8e-05 Score=78.04 Aligned_cols=110 Identities=17% Similarity=0.216 Sum_probs=76.5
Q ss_pred cCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCC--CCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEcc
Q 011874 293 AHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGI--NNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPV 370 (475)
Q Consensus 293 aHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~--~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvPi 370 (475)
.||.|+.... ++.+++|.++|..++. ..++.+++ +.+ .|+++|+|++|.++|+++|+|+|.
T Consensus 51 g~gSPl~~~t----------~~q~~~L~~~L~~~~~~~~~~V~~am--ry~-----~P~i~~~l~~l~~~G~~~ivvlPl 113 (310)
T 2h1v_A 51 GGISPLAQIT----------EQQAHNLEQHLNEIQDEITFKAYIGL--AHI-----EPFIEDAVAEMHKDGITEAVSIVL 113 (310)
T ss_dssp TCSHHHHHHH----------HHHHHHHHHHHHHHCSSEEEEEEEEE--SSS-----SSBHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCChhHHHH----------HHHHHHHHHHHHhcCCCCCceEeehh--cCC-----CCCHHHHHHHHHhcCCCEEEEEEC
Confidence 5788865331 3345555555543331 12345555 343 799999999999999999999999
Q ss_pred c-----ccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 371 S-----FVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 371 g-----FvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
. +++.+. ..++....+ +.+...++.++.+.+||.||+++++.|.+++..
T Consensus 114 ~pq~s~st~g~~--~~~i~~~l~----~~~~~~i~~i~~~~~~p~~i~a~a~~i~~~l~~ 167 (310)
T 2h1v_A 114 APHFSTFSVQSY--NKRAKEEAE----KLGGLTITSVESWYDEPKFVTYWVDRVKETYAS 167 (310)
T ss_dssp SSSCCTTTHHHH--HHHHHHHHH----HHCSCEEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhHHHH--HHHHHHHHH----hCCCCeEEEeCCCCCCHHHHHHHHHHHHHHHHh
Confidence 7 455544 445443333 333457999999999999999999999988753
No 16
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=97.96 E-value=3.7e-05 Score=79.04 Aligned_cols=113 Identities=20% Similarity=0.304 Sum_probs=76.0
Q ss_pred cCCCchhhhhccCCChHHHHHHHHHHHHHHHhccC---CCCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEc
Q 011874 293 AHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRG---INNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIP 369 (475)
Q Consensus 293 aHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g---~~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvP 369 (475)
.||.|+... .++.++.|.++|...+ ...++.+++ +.| .|+++|+|++|.++|+++|+|+|
T Consensus 68 g~gSPL~~~----------t~~q~~~L~~~L~~~~~~~~~~~V~~am--ry~-----~P~i~d~l~~l~~~G~~~ivvlP 130 (362)
T 1lbq_A 68 GGGSPIRKW----------SEYQATEVCKILDKTCPETAPHKPYVAF--RYA-----KPLTAETYKQMLKDGVKKAVAFS 130 (362)
T ss_dssp TSSCSHHHH----------HHHHHHHHHHHHHHHCGGGCCEEEEEEE--SSS-----SSCHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCccHHH----------HHHHHHHHHHHHHhhcccCCCceEEeec--ccC-----CCCHHHHHHHHHHcCCCeEEEEe
Confidence 477776543 2344555666653221 111344554 443 79999999999999999999999
Q ss_pred cc--c---cccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 370 VS--F---VSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 370 ig--F---vsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
.. | ++.+. ..++....++.....++ .+..++.+.+||.||+++++.|.+++..
T Consensus 131 lyPqyS~~ttgs~--~~~i~~~l~~~~~~~~i-~i~~i~~~~~~p~~I~ala~~I~~~l~~ 188 (362)
T 1lbq_A 131 QYPHFSYSTTGSS--INELWRQIKALDSERSI-SWSVIDRWPTNEGLIKAFSENITKKLQE 188 (362)
T ss_dssp SCSSCCTTTHHHH--HHHHHHHHHHHCTTCCS-EEEEECCCTTCHHHHHHHHHHHHHHHHT
T ss_pred cchhccccchhHH--HHHHHHHHHhcccCCCc-eEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 74 2 33344 55554444444212233 5789999999999999999999998764
No 17
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=97.77 E-value=2.2e-05 Score=83.35 Aligned_cols=121 Identities=14% Similarity=0.100 Sum_probs=82.6
Q ss_pred eEEEEecCCCchhhhhccCCCh-HHHHHHHHHHHHHHHhccCC-CCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCce
Q 011874 287 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGI-NNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKS 364 (475)
Q Consensus 287 ~~LLFSaHglP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~-~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~ 364 (475)
..||+.+||.|.. ++ ..++.+.++.+.++.....+ ..++.++|-+ | .|+++++|++| |+++
T Consensus 4 ~alLLVgHGSp~~-------~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle------~-~PsI~eaL~~L---G~~r 66 (474)
T 2jh3_A 4 RSLVLIGHGSHHH-------GESARATQQVAEALRGRGLAGHLPYDEVLEGYWQ------Q-EPGLRQVLRTV---AYSD 66 (474)
T ss_dssp CEEEEEECCCSSC-------THHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESS------S-SSBTTTGGGGC---CBSE
T ss_pred ceEEEEeCCCCCC-------hhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcC------C-CCCHHHHHHHc---CcCe
Confidence 4799999999842 33 44555666666555310000 1357788865 2 79999999999 9999
Q ss_pred EEEEcccccccchhhHHHHHHHHHHHHH----------HcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 365 LLAIPVSFVSEHIETLEEIDMEYKELAL----------ESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 365 VvVvPigFvsDhlETL~EIDiE~re~a~----------e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
|+|+|..++. ..++-.||..+..+... ..+...+..++.|++||.+++++++.|.+.+..
T Consensus 67 VvVvPLfl~~-G~H~~~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~ 136 (474)
T 2jh3_A 67 VTVVPVFLSE-GYVTETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPE 136 (474)
T ss_dssp EEEEECCSCC-SHHHHTHHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCT
T ss_pred EEEEEEehhc-cHhHHHHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhh
Confidence 9999975544 34444455444332211 234447899999999999999999999998865
No 18
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=97.67 E-value=0.00018 Score=73.79 Aligned_cols=105 Identities=15% Similarity=0.264 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHhccCC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHhhhcCCceEEEEcc--cccccchhh-HHHHHHH
Q 011874 313 EECIYLIMQRLKDRGI---NNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPV--SFVSEHIET-LEEIDME 386 (475)
Q Consensus 313 ~~t~~~v~e~L~~~g~---~~~~~lafQSr~Gp~~WL~P~t~d~L~~L~~~G~k~VvVvPi--gFvsDhlET-L~EIDiE 386 (475)
++.+++|.+.|...+- ..++.+++ |.| .|+++|+|++|.++|+++|+++|. .|.+=...+ +.++...
T Consensus 73 ~~Q~~~L~~~L~~~~~~~~~~~V~~am--ry~-----~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~ 145 (359)
T 3hcn_A 73 SKQGEGMVKLLDELSPNTAPHKYYIGF--RYV-----HPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRY 145 (359)
T ss_dssp HHHHHHHHHHHHHHCGGGCSEEEEEEE--SSS-----SSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccccCceEEEEE--eeC-----CCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHH
Confidence 4445556565532221 11344555 443 799999999999999999999996 233222222 3333333
Q ss_pred HHHHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 011874 387 YKELALESGIENWGRVPALNCTPSFITDLADAVIEALPS 425 (475)
Q Consensus 387 ~re~a~e~G~~~~~rvp~LNdsp~fI~aLadlV~e~l~~ 425 (475)
+++... .+.-.++.++...+||.||+++++.|.+++..
T Consensus 146 ~~~~~~-~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~ 183 (359)
T 3hcn_A 146 YNQVGR-KPTMKWSTIDRWPTHHLLIQCFADHILKELDH 183 (359)
T ss_dssp HHHTTC-CCSSEEEEECCCTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhcc-CCCCceEEeCCccCCHHHHHHHHHHHHHHHHh
Confidence 333211 22226899999999999999999999999875
No 19
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=55.05 E-value=25 Score=33.14 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=27.0
Q ss_pred cEEEEEEccCCCC--CcCcHHHHHHhhcCCCCcccCChhh
Q 011874 99 KVGVLLLNLGGPD--TLHDVQPFLFNLFADPDIIRLPRLF 136 (475)
Q Consensus 99 k~aVLLlNlG~P~--s~~dV~~FL~~~l~D~~Vi~lP~~~ 136 (475)
..|+ .|+|+|+ |..|+-..+.+.+.-|.++++|.|+
T Consensus 211 ~~g~--yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~ 248 (298)
T 4b4o_A 211 VHGV--LNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAV 248 (298)
T ss_dssp CCEE--EEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHH
T ss_pred CCCe--EEEECCCccCHHHHHHHHHHHhCcCCcccCCHHH
Confidence 3564 5666666 6678989999999878888888653
No 20
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=50.04 E-value=99 Score=29.86 Aligned_cols=131 Identities=15% Similarity=0.200 Sum_probs=75.6
Q ss_pred ccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Q 011874 258 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 337 (475)
Q Consensus 258 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 337 (475)
+++|-+|.....+++.|.+.|.+.. |+.. .+.++|.+.|..++.+.-+.+.+.+.. +....-+++.
T Consensus 132 PH~Wldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~--~~~~~~v~~H 197 (291)
T 1pq4_A 132 PHIWLSPTLVKRQATTIAKELAELD-PDNR-----------DQYEANLAAFLAELERLNQELGQILQP--LPQRKFIVFH 197 (291)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHC-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHTT--CSCCEEEESS
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHC-cccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCCEEEEEC
Confidence 4688899999999999999998763 2211 112345667888888887778777742 2112112221
Q ss_pred CC---------------CCCCCCCCCCHHH---HHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceE
Q 011874 338 SR---------------VGPVKWLKPYTDE---VLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENW 399 (475)
Q Consensus 338 Sr---------------~Gp~~WL~P~t~d---~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~ 399 (475)
.. .|.. .+|+..+ .++.+.+.|++ +|++-..|-..-.|+| |++.|++.
T Consensus 198 ~af~Yf~~~yGl~~~~~~~~~--~eps~~~l~~l~~~ik~~~v~-~If~e~~~~~~~~~~i----------a~~~g~~v- 263 (291)
T 1pq4_A 198 PSWAYFARDYNLVQIPIEVEG--QEPSAQELKQLIDTAKENNLT-MVFGETQFSTKSSEAI----------AAEIGAGV- 263 (291)
T ss_dssp CCCHHHHHHTTCEEEESCBTT--BCCCHHHHHHHHHHHHTTTCC-EEEEETTSCCHHHHHH----------HHHHTCEE-
T ss_pred CchHHHHHHCCCEEeecccCC--CCCCHHHHHHHHHHHHHcCCC-EEEEeCCCChHHHHHH----------HHHcCCeE-
Confidence 11 1211 3454433 33344455664 5555667766666653 67788864
Q ss_pred EEcCCCCCCHHHHHHHHHH
Q 011874 400 GRVPALNCTPSFITDLADA 418 (475)
Q Consensus 400 ~rvp~LNdsp~fI~aLadl 418 (475)
..+..|.. .+++.|...
T Consensus 264 ~~ld~l~~--~Y~~~m~~n 280 (291)
T 1pq4_A 264 ELLDPLAA--DWSSNLKAV 280 (291)
T ss_dssp EEECTTCS--SHHHHHHHH
T ss_pred EEEcCchh--hHHHHHHHH
Confidence 45555554 455555443
No 21
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=49.59 E-value=15 Score=37.65 Aligned_cols=65 Identities=17% Similarity=0.305 Sum_probs=44.9
Q ss_pred CCCCCCHHHHHHHhhhc-CCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHH
Q 011874 344 KWLKPYTDEVLVELGQK-GVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPS 410 (475)
Q Consensus 344 ~WL~P~t~d~L~~L~~~-G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~ 410 (475)
.|.+|...+.|+++++. |++.|.+.+.-+.....-+..++ .+.++.+++.|+ .+.-+.+++-++.
T Consensus 26 rW~g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i-~~lk~~l~~~GL-~i~~i~s~~~~~~ 91 (386)
T 3bdk_A 26 RWYGKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENI-LELKKMVEEAGL-EITVIESIPVHED 91 (386)
T ss_dssp BCCCTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHH-HHHHHHHHTTTC-EEEEEECCCCCHH
T ss_pred EecCCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHH-HHHHHHHHHcCC-EEEEEeccccccc
Confidence 58888888899999999 99999886532222111123333 246777889999 4777777777754
No 22
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=44.78 E-value=1.7e+02 Score=28.29 Aligned_cols=199 Identities=12% Similarity=0.046 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEeeeccC---CCHHHHHHHHHHCC-CCEEEEE----ecCCcccccChHHHHHHH
Q 011874 168 LRKITDEQAQALKTALEAKNLPVNVYVGMRYWY---PFTEEAVQQIKRDR-ITRLVVL----PLYPQFSISTTGSSIRVL 239 (475)
Q Consensus 168 L~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~---P~iedal~~l~~~G-v~rIvvl----PLyPqYS~sTtgS~~~~l 239 (475)
-.+-|-++.++|++ .++-|+.|.-|-. .++++.++.+...+ .. +|-+ .+.+.-.
T Consensus 53 ~yeptp~d~~~l~~------Adlvv~~G~~lE~~~~~w~~k~~~~~~~~~~~~-~v~~s~gi~~~~~~~----------- 114 (294)
T 3hh8_A 53 EYEPLPEDAEKTSN------ADVIFYNGINLEDGGQAWFTKLVKNAQKTKNKD-YFAVSDGIDVIYLEG----------- 114 (294)
T ss_dssp SCCCCHHHHHHHHH------CSEEEECCTTSSCSTTSHHHHHHHHTTCCBTTT-EEETTTTSCCCBSTT-----------
T ss_pred cccCCHHHHHHHHh------CCEEEEcCCCccchHHHHHHHHHHhccccCCce-EEEccCCcccccCCC-----------
Confidence 34456677777764 3778888866544 28888877664321 22 2222 1111100
Q ss_pred HHHHHHhccCCCCCEEEeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHH
Q 011874 240 QNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLI 319 (475)
Q Consensus 240 ~~~~~~~~~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v 319 (475)
+ ..... .=+|+|-+|.....+++.|.+.|.+.. |+.. .+.++|.+.|..++.+.-+.+
T Consensus 115 -----~-~~~~~----~dPHvWldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~Ld~~~ 172 (294)
T 3hh8_A 115 -----A-SEKGK----EDPHAWLNLENGIIYSKNIAKQLIAKD-PKNK-----------ETYEKNLKAYVAKLEKLDKEA 172 (294)
T ss_dssp -----C-CSTTC----BCCCGGGSHHHHHHHHHHHHHHHHHHC-GGGH-----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred -----c-cCCCC----CCCceeCCHHHHHHHHHHHHHHHHHhC-ccch-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 0 00111 124678899999999999999998763 2211 112234566777777777777
Q ss_pred HHHHhccCCCC--CeEEEEeCCC-------C--------CCCCCCCCH---HHHHHHhhhcCCceEEEEcccccccchhh
Q 011874 320 MQRLKDRGINN--DHTLAYQSRV-------G--------PVKWLKPYT---DEVLVELGQKGVKSLLAIPVSFVSEHIET 379 (475)
Q Consensus 320 ~e~L~~~g~~~--~~~lafQSr~-------G--------p~~WL~P~t---~d~L~~L~~~G~k~VvVvPigFvsDhlET 379 (475)
.+.+. +++. ..-++|...+ | ..+=.+|+. .+.++.+.+.|++-|++-| .|-..-+|
T Consensus 173 ~~~l~--~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~-~~~~~~~~- 248 (294)
T 3hh8_A 173 KSKFD--AIAENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVES-SVDRRPME- 248 (294)
T ss_dssp HHTTT--TSCGGGCCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEET-TSCSHHHH-
T ss_pred HHHHh--hCCccCcEEEEECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC-CCCcHHHH-
Confidence 76663 2221 2223332221 1 111124533 3345555667877666544 55444343
Q ss_pred HHHHHHHHHHHHHHcCCceE--EEcCCCC----CCHHHHHHHHHHH
Q 011874 380 LEEIDMEYKELALESGIENW--GRVPALN----CTPSFITDLADAV 419 (475)
Q Consensus 380 L~EIDiE~re~a~e~G~~~~--~rvp~LN----dsp~fI~aLadlV 419 (475)
.++++.|++-. .+.+.++ ....+++.|.+-+
T Consensus 249 ---------~ia~~~g~~v~~~~~~~~l~~~~~~~~~Y~~~m~~n~ 285 (294)
T 3hh8_A 249 ---------TVSKDSGIPIYSEIFTDSIAKKGKPGDSYYAMMKWNL 285 (294)
T ss_dssp ---------HHHHHHCCCEEEEECSSSCCCTTSTTCSHHHHHHHHH
T ss_pred ---------HHHHHhCCcEEeeecCcccCCCCCCcccHHHHHHHHH
Confidence 45778898754 4556665 2335666555443
No 23
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=41.96 E-value=65 Score=28.63 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=27.4
Q ss_pred hcCCceEEEEcccccccchhh---HHHHHHHHHHHHHHcCCceEEEcC
Q 011874 359 QKGVKSLLAIPVSFVSEHIET---LEEIDMEYKELALESGIENWGRVP 403 (475)
Q Consensus 359 ~~G~k~VvVvPigFvsDhlET---L~EIDiE~re~a~e~G~~~~~rvp 403 (475)
+-|.++|++.|++=.|+.+.- =.++=.+..+..++.|. ++.|+|
T Consensus 70 kv~~~~ivlYPyAHLSs~La~P~~A~~iL~~le~~L~~~g~-eV~raP 116 (143)
T 2hl0_A 70 QVKAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLKERGF-NVGKAP 116 (143)
T ss_dssp HHTCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHHHTTC-EEEECC
T ss_pred hcCCCEEEEeccccccCccCChHHHHHHHHHHHHHHHhCCC-eEEEeC
Confidence 347889999999999987632 12222222333445676 577877
No 24
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=40.89 E-value=19 Score=30.76 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=29.8
Q ss_pred CHHHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCc
Q 011874 349 YTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIE 397 (475)
Q Consensus 349 ~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~ 397 (475)
.+.++++++.+.|+|. +++..||.. .|..+.|+++|++
T Consensus 70 ~v~~~v~e~~~~g~k~-v~~~~G~~~----------~e~~~~a~~~Gir 107 (122)
T 3ff4_A 70 NQLSEYNYILSLKPKR-VIFNPGTEN----------EELEEILSENGIE 107 (122)
T ss_dssp HHGGGHHHHHHHCCSE-EEECTTCCC----------HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhcCCCE-EEECCCCCh----------HHHHHHHHHcCCe
Confidence 4567889999999996 567788842 4678889999984
No 25
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=40.43 E-value=1.4e+02 Score=25.98 Aligned_cols=30 Identities=13% Similarity=0.111 Sum_probs=22.7
Q ss_pred CCch--HHHHHHHHHHHHHHHHhcCCCceEEE
Q 011874 165 GSPL--RKITDEQAQALKTALEAKNLPVNVYV 194 (475)
Q Consensus 165 gSPL--~~~T~~qa~~L~~~L~~~~~~~~V~~ 194 (475)
+||- ...|+..++.+.+.|.+.|+++.|.+
T Consensus 9 ~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~ 40 (201)
T 1t5b_A 9 SSILAGYSQSGQLTDYFIEQWREKHVADEITV 40 (201)
T ss_dssp CCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred eCCCCCCChHHHHHHHHHHHHHHhCCCCeEEE
Confidence 5776 48999999999999988764444544
No 26
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=37.79 E-value=59 Score=32.09 Aligned_cols=64 Identities=14% Similarity=0.226 Sum_probs=41.1
Q ss_pred CCCCC-CHHHHHHHhhhc-CCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCH
Q 011874 344 KWLKP-YTDEVLVELGQK-GVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTP 409 (475)
Q Consensus 344 ~WL~P-~t~d~L~~L~~~-G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp 409 (475)
.|.+| +..++|+.+++. |++.|.+.....-.+..-+..++ .+.++.+++.|++ +.-+..++.++
T Consensus 16 ~~~g~~~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~-~~~~~~l~~~GL~-i~~~~~~~~~~ 81 (367)
T 1tz9_A 16 RWYGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEI-QALKQSVEQEGLA-LLGIESVAIHD 81 (367)
T ss_dssp BCCCTTTCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHH-HHHHHHHHHTTCE-EEEECSCCCCH
T ss_pred eecCCCCChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHH-HHHHHHHHHCCCe-EEEEecCCCcH
Confidence 58888 778889999999 99999874321111111122222 3467778899995 55566677664
No 27
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=35.43 E-value=3.2 Score=39.24 Aligned_cols=57 Identities=25% Similarity=0.434 Sum_probs=45.1
Q ss_pred EEEeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHH
Q 011874 254 VSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEEC 315 (475)
Q Consensus 254 v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t 315 (475)
+..|.+|.+++.+++.++..++++|..| +.+.=++-..|+|..-+ ..|+|..++.+.
T Consensus 47 m~Li~rYp~~~~Lv~~m~~LarEEL~HF---eqVl~im~~Rgi~l~~~--~~~~Ya~~L~k~ 103 (206)
T 2itb_A 47 LSLIAKYNTHLDLINMMSRLAREELVHH---EQVLRLMKRRGVPLRPV--SAGRYASGLRRL 103 (206)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHH---HHHHHHHHHTTCCCCCC--CCCSHHHHHHTT
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHHHHH---HHHHHHHHHcCCCCCCC--CCCHHHHHHHHH
Confidence 5678889999999999999999999877 34444567888888765 468997666543
No 28
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=35.02 E-value=3e+02 Score=26.08 Aligned_cols=31 Identities=6% Similarity=0.119 Sum_probs=24.0
Q ss_pred EEeeeccCCCHHHHHHHHHHCCCCEEEEEec
Q 011874 193 YVGMRYWYPFTEEAVQQIKRDRITRLVVLPL 223 (475)
Q Consensus 193 ~~amrY~~P~iedal~~l~~~Gv~rIvvlPL 223 (475)
+.++.+.....+++++++.+.|+++++++..
T Consensus 19 ~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~ 49 (301)
T 2xio_A 19 YRGVQKHQDDLQDVIGRAVEIGVKKFMITGG 49 (301)
T ss_dssp ETTEECSCCCHHHHHHHHHHHTEEEEEECCC
T ss_pred ccccccCccCHHHHHHHHHHCCCCEEEEeCC
Confidence 3344455678899999999999999988743
No 29
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=34.13 E-value=95 Score=29.80 Aligned_cols=136 Identities=13% Similarity=0.190 Sum_probs=76.8
Q ss_pred ccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Q 011874 258 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 337 (475)
Q Consensus 258 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 337 (475)
+++|-+|.....+++.|.++|.+.. |+.. ...++|.+.|..++.+.-+.+.+.+.. +....-+++.
T Consensus 119 PH~Wldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~--~~~~~~v~~H 184 (284)
T 3cx3_A 119 PHTWLDPEKAGEEAQIIADKLSEVD-SEHK-----------ETYQKNAQAFIKKAQELTKKFQPKFEK--ATQKTFVTQH 184 (284)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHS-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHS--CSCCCEEEEE
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhC-cccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEEC
Confidence 4788999999999999999998763 2211 112245567888888877777777742 1111112222
Q ss_pred CC-----------------CCC-CCCCCCC-HHHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCce
Q 011874 338 SR-----------------VGP-VKWLKPY-TDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIEN 398 (475)
Q Consensus 338 Sr-----------------~Gp-~~WL~P~-t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~ 398 (475)
.. ..+ .++ +|. +.+.++.+.+.|++ ++++-..|-..-.|+ ++++.|++
T Consensus 185 ~af~Yf~~~yGl~~~~~~~~~~~~ep-s~~~l~~l~~~ik~~~v~-~if~e~~~~~~~~~~----------ia~~~g~~- 251 (284)
T 3cx3_A 185 TAFSYLAKRFGLNQLGIAGISPEQEP-SPRQLTEIQEFVKTYKVK-TIFTESNASSKVAET----------LVKSTGVG- 251 (284)
T ss_dssp SCCHHHHHHTTCCEEEEECSSTTCCC-CSHHHHHHHHHHHHTTCC-CEEECSSSCCHHHHH----------HHSSSSCC-
T ss_pred CchHHHHHHcCCEEeeccCCCCCCCC-CHHHHHHHHHHHHHcCCC-EEEEeCCCCcHHHHH----------HHHHcCCe-
Confidence 11 111 112 232 33444445566775 445555665555544 47788986
Q ss_pred EEEcCCCCC----CHHHHHHHHHHHH
Q 011874 399 WGRVPALNC----TPSFITDLADAVI 420 (475)
Q Consensus 399 ~~rvp~LNd----sp~fI~aLadlV~ 420 (475)
+..+..+.. ...+++.|...+.
T Consensus 252 v~~l~~l~~~~~~~~~Y~~~m~~n~~ 277 (284)
T 3cx3_A 252 LKTLNPLESDPQNDKTYLENLEENMS 277 (284)
T ss_dssp EEECCCSSSCCCSSCCHHHHHHHHHH
T ss_pred EEEecCcccCCCCcccHHHHHHHHHH
Confidence 555655544 3357766655443
No 30
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=31.95 E-value=2e+02 Score=26.07 Aligned_cols=60 Identities=13% Similarity=-0.029 Sum_probs=29.2
Q ss_pred HHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCHHHHHHHHHHHHH
Q 011874 352 EVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIE 421 (475)
Q Consensus 352 d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp~fI~aLadlV~e 421 (475)
+.-+.+.+.|.+-+.+.|+. ....|.+ .+.-+.|.+.|.+.+ +++. + +...+.++++..+
T Consensus 67 ~~~~~l~~~gl~i~~~~~~~--~~~~~~~----~~~i~~A~~lGa~~v-~~~~-~--~~~~~~l~~~a~~ 126 (262)
T 3p6l_A 67 EIKELAASKGIKIVGTGVYV--AEKSSDW----EKMFKFAKAMDLEFI-TCEP-A--LSDWDLVEKLSKQ 126 (262)
T ss_dssp HHHHHHHHTTCEEEEEEEEC--CSSTTHH----HHHHHHHHHTTCSEE-EECC-C--GGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEeccC--CccHHHH----HHHHHHHHHcCCCEE-EecC-C--HHHHHHHHHHHHH
Confidence 33344556677544444432 1233322 235567778888644 4442 2 2333556665544
No 31
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=31.15 E-value=1.5e+02 Score=28.50 Aligned_cols=136 Identities=15% Similarity=0.207 Sum_probs=75.8
Q ss_pred ccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Q 011874 258 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 337 (475)
Q Consensus 258 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 337 (475)
+++|-+|.....+++.|.++|.+.. |+.. ...++|.+.|..++.+.-+.+.+.+.. +....-++|.
T Consensus 121 PHvWldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~--~~~~~~v~~H 186 (286)
T 3gi1_A 121 PHTWTDPVLAGEEAVNIAKELGRLD-PKHK-----------DSYTKNAKAFKKEAEQLTEEYTQKFKK--VRSKTFVTQH 186 (286)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHC-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHTT--CSCCEEEEEE
T ss_pred CceecCHHHHHHHHHHHHHHHHHHC-hhhH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEEC
Confidence 4788999999999999999998763 2211 112245567888888888888877742 2223334443
Q ss_pred CCC-------CC--------CCCCCCCH---HHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceE
Q 011874 338 SRV-------GP--------VKWLKPYT---DEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENW 399 (475)
Q Consensus 338 Sr~-------Gp--------~~WL~P~t---~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~ 399 (475)
..+ |- .+=.+|+. .+.++.+.+.|++ ++++-..|-..-.|+ ++++.|++ +
T Consensus 187 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~-~if~e~~~~~~~~~~----------la~~~g~~-v 254 (286)
T 3gi1_A 187 TAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVK-TIFAEDNVNPKIAHA----------IAKSTGAK-V 254 (286)
T ss_dssp SCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCC-EEEECTTSCTHHHHH----------HHHTTTCE-E
T ss_pred CchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCC-EEEEeCCCChHHHHH----------HHHHhCCe-E
Confidence 322 21 00113433 3344445556765 444455665554444 46788885 4
Q ss_pred EEcCCCCC----CHHHHHHHHHHH
Q 011874 400 GRVPALNC----TPSFITDLADAV 419 (475)
Q Consensus 400 ~rvp~LNd----sp~fI~aLadlV 419 (475)
..+..|.. .+.+++.|..-+
T Consensus 255 ~~l~pl~~~~~~~~~Y~~~m~~n~ 278 (286)
T 3gi1_A 255 KTLSPLEAAPSGNKTYLENLRANL 278 (286)
T ss_dssp EECCCSCSCCSSSCCHHHHHHHHH
T ss_pred EEecccccCCCCcCCHHHHHHHHH
Confidence 44433332 235666655443
No 32
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=29.26 E-value=4.7e+02 Score=26.55 Aligned_cols=139 Identities=19% Similarity=0.228 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCC
Q 011874 265 GYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVK 344 (475)
Q Consensus 265 ~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~ 344 (475)
.|++++.+.|+...+......-..+.|.. |.|.-. -..++.+..+.+.+.. ++....+++..++.+
T Consensus 84 ~~~~~l~~Ei~~~~~~~~~~~i~~i~fgG-Gtpt~l-------~~~~l~~ll~~i~~~~---~~~~~~eitie~~p~--- 149 (457)
T 1olt_A 84 QYLDALEQEIVHRAPLFAGRHVSQLHWGG-GTPTYL-------NKAQISRLMKLLRENF---QFNADAEISIEVDPR--- 149 (457)
T ss_dssp HHHHHHHHHHHHHGGGGTTCCEEEEEEEE-SCGGGS-------CHHHHHHHHHHHHHHS---CEEEEEEEEEEECSS---
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeC-CCcccC-------CHHHHHHHHHHHHHhC---CCCCCcEEEEEEccC---
Confidence 56777777776654443322112344443 555311 1456777777777764 322234555555322
Q ss_pred CCCCCHHHHHHHhhhcCCceEEEEcc-cccccchhhH-----HHHHHHHHHHHHHcCCc--eEEEc-CCCCCCHHHHHHH
Q 011874 345 WLKPYTDEVLVELGQKGVKSLLAIPV-SFVSEHIETL-----EEIDMEYKELALESGIE--NWGRV-PALNCTPSFITDL 415 (475)
Q Consensus 345 WL~P~t~d~L~~L~~~G~k~VvVvPi-gFvsDhlETL-----~EIDiE~re~a~e~G~~--~~~rv-p~LNdsp~fI~aL 415 (475)
-+ +++.|+.|.+.|+.+|-+ .+ +|-.+.++.+ .|--.+.-+.+.+.|+. +...+ -.++.+.+-+...
T Consensus 150 ~l---~~e~l~~L~~~G~~risl-GvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~t 225 (457)
T 1olt_A 150 EI---ELDVLDHLRAEGFNRLSM-GVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFT 225 (457)
T ss_dssp SC---CTHHHHHHHHTTCCEEEE-EEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHH
T ss_pred cC---CHHHHHHHHHcCCCEEEE-eeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHH
Confidence 12 567888888889866543 33 2222222222 22234455677788885 33333 3457776655555
Q ss_pred HHHHHH
Q 011874 416 ADAVIE 421 (475)
Q Consensus 416 adlV~e 421 (475)
.+.+.+
T Consensus 226 l~~~~~ 231 (457)
T 1olt_A 226 LKRVAE 231 (457)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555554
No 33
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=29.17 E-value=2.7e+02 Score=25.88 Aligned_cols=70 Identities=7% Similarity=0.020 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHH
Q 011874 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (475)
Q Consensus 169 ~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (475)
...|...++.+.+.|.+.|.++ ++-.-+....+++..+++.+. |.||+. +|-|-.+..+.....+++.+.
T Consensus 42 ~s~n~~L~~~~~~~l~~~g~ev--~~~dL~~~~Dv~~~~~~l~~a--D~iv~~--~P~y~~~~p~~lK~~iD~v~~ 111 (218)
T 3rpe_A 42 GALNLTLTNVAADFLRESGHQV--KITTVDQGYDIESEIENYLWA--DTIIYQ--MPAWWMGEPWILKKYIDEVFT 111 (218)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCE--EEEEGGGCCCHHHHHHHHHHC--SEEEEE--EECBTTBCCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEE--EEEECCCccCHHHHHHHHHhC--CEEEEE--CChHhccCCHHHHHHHHHHHh
Confidence 4788899999999998766544 433334456777777777664 555443 455555555555556666554
No 34
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=28.89 E-value=32 Score=26.72 Aligned_cols=46 Identities=17% Similarity=0.178 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhcCCC---------ceEEEeeeccCCCHHHHHHHHHHCCCCEE
Q 011874 173 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITRL 218 (475)
Q Consensus 173 ~~qa~~L~~~L~~~~~~---------~~V~~amrY~~P~iedal~~l~~~Gv~rI 218 (475)
++.|+.|.+.|...|.+ ++|.+|---..--.+.+.++|++.|++..
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~~ 74 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNC 74 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCcE
Confidence 45567777777665532 34444422222223344455555555443
No 35
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=28.38 E-value=4e+02 Score=25.54 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHH---hhhcCCceEEEEcccccccchhhHHHHHH
Q 011874 309 RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVE---LGQKGVKSLLAIPVSFVSEHIETLEEIDM 385 (475)
Q Consensus 309 ~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~---L~~~G~k~VvVvPigFvsDhlETL~EIDi 385 (475)
.+|-.+.++.+.+.... +..+--. +| ..+|.++++. ..+.|+..++++||.|..-.-|-|++
T Consensus 59 ~~Er~~v~~~~~~~~~g-----rvpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 123 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVAK-----RVPVIAG--TG-----ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQ--- 123 (297)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEe--CC-----CcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHH---
Confidence 45666677777777621 2223222 23 4788888775 45679999999999887644444443
Q ss_pred HHHHHHHHcCCceEEE-cC---CCCCCHHHHHHHH
Q 011874 386 EYKELALESGIENWGR-VP---ALNCTPSFITDLA 416 (475)
Q Consensus 386 E~re~a~e~G~~~~~r-vp---~LNdsp~fI~aLa 416 (475)
-++++++..+..-+.| +| -.+-+++.+..|+
T Consensus 124 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 124 HFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 5788888777654433 33 2566777766554
No 36
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.98 E-value=84 Score=27.67 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=58.3
Q ss_pred EEEEEccCCCCCcCcHH-HHHHhhcC--CCCcccCChhhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHHHH
Q 011874 101 GVLLLNLGGPDTLHDVQ-PFLFNLFA--DPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQ 177 (475)
Q Consensus 101 aVLLlNlG~P~s~~dV~-~FL~~~l~--D~~Vi~lP~~~~~~~~~L~~~Ia~~R~~k~~~~Y~~IGggSPL~~~T~~qa~ 177 (475)
-|||...|+ +.- |+. .++..+|. +=+|+.++.. -|...++...+ ......|| -|=+...+..+..
T Consensus 20 ~vlla~~~g-d~H-diG~~~va~~l~~~G~eVi~lG~~-----~p~e~lv~aa~----~~~~diV~-lS~~~~~~~~~~~ 87 (161)
T 2yxb_A 20 KVLVAKMGL-DGH-DRGAKVVARALRDAGFEVVYTGLR-----QTPEQVAMAAV----QEDVDVIG-VSILNGAHLHLMK 87 (161)
T ss_dssp EEEEEEESS-SSC-CHHHHHHHHHHHHTTCEEECCCSB-----CCHHHHHHHHH----HTTCSEEE-EEESSSCHHHHHH
T ss_pred EEEEEeCCC-Ccc-HHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHH----hcCCCEEE-EEeechhhHHHHH
Confidence 488888887 432 222 34444443 3467766421 13344443321 12333443 2444445666777
Q ss_pred HHHHHHHhcCC-CceEEEeeeccCCCHHHHHHHHHHCCCCEEE
Q 011874 178 ALKTALEAKNL-PVNVYVGMRYWYPFTEEAVQQIKRDRITRLV 219 (475)
Q Consensus 178 ~L~~~L~~~~~-~~~V~~amrY~~P~iedal~~l~~~Gv~rIv 219 (475)
.+.+.|++.+. +.+|.+| +.|..++ .+.+.+.|++.++
T Consensus 88 ~~i~~L~~~g~~~i~v~vG---G~~~~~~-~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 88 RLMAKLRELGADDIPVVLG---GTIPIPD-LEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHHHTTCTTSCEEEE---ECCCHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHhcCCCCCEEEEe---CCCchhc-HHHHHHCCCcEEE
Confidence 77777877764 6889998 6666554 4567788998554
No 37
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=27.19 E-value=4.2e+02 Score=25.38 Aligned_cols=88 Identities=16% Similarity=0.124 Sum_probs=56.8
Q ss_pred CceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccc--------cChHHHHHHHHHHHHH-hccCC---CCCEEE
Q 011874 189 PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSI--------STTGSSIRVLQNIFRE-DAYLS---RLPVSI 256 (475)
Q Consensus 189 ~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~--------sTtgS~~~~l~~~~~~-~~~~~---~~~v~~ 256 (475)
+++|.+|+-=..|...+..+..++.|-+=++-+||=|..-. -+++...+++.+.++. ....| ++.=+.
T Consensus 54 P~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 133 (261)
T 2qv5_A 54 PPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYL 133 (261)
T ss_dssp CTTSEEEEETTCSSHHHHHHHHHHHTCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 57788888777799999999999999999999999765311 1222223344433332 11223 233456
Q ss_pred eccCCCChHHHHHHHHHHHH
Q 011874 257 IRSWYQREGYVNSMADLIQK 276 (475)
Q Consensus 257 I~~~~~~p~yI~ala~~I~~ 276 (475)
...|-.++.-.+.+.+.+++
T Consensus 134 GS~~T~~~~~M~~vm~~L~~ 153 (261)
T 2qv5_A 134 GGRFLAEQSALEPVMRDIGK 153 (261)
T ss_dssp CTTGGGCHHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHH
Confidence 67777787777766655554
No 38
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=24.52 E-value=1e+02 Score=29.57 Aligned_cols=136 Identities=13% Similarity=0.169 Sum_probs=77.5
Q ss_pred ccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Q 011874 258 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 337 (475)
Q Consensus 258 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 337 (475)
+++|-+|.....+++.|.++|.+.. |+.. .+.++|.+.|..++.+.-+.+.+.+... ....-+++.
T Consensus 116 PH~Wldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~~--~~~~~v~~H 181 (284)
T 2prs_A 116 MHLWLSPEIARATAVAIHGKLVELM-PQSR-----------AKLDANLKDFEAQLASTETQVGNELAPL--KGKGYFVFH 181 (284)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHC-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHGGG--TTCCEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHHHhC-chhH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEEC
Confidence 4678899999999999999998763 2211 1123455678788888777777777421 122223332
Q ss_pred CCC-------C--------CCCCCCCCHH---HHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceE
Q 011874 338 SRV-------G--------PVKWLKPYTD---EVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENW 399 (475)
Q Consensus 338 Sr~-------G--------p~~WL~P~t~---d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~ 399 (475)
..+ | ..+=.+|+.. +.++.+.+.|++ ++++-..|-..-.|+| +++.|++ +
T Consensus 182 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~-~if~e~~~~~~~~~~i----------a~~~g~~-v 249 (284)
T 2prs_A 182 DAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKAT-CVFAEPQFRPAVVESV----------ARGTSVR-M 249 (284)
T ss_dssp SCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCC-EEEECTTSCSHHHHHH----------TTTSCCE-E
T ss_pred ccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHcCCC-EEEEeCCCChHHHHHH----------HHHcCCe-E
Confidence 221 1 1111345443 344445556765 4555556655555554 6688886 4
Q ss_pred EEcCCCCC-----CHHHHHHHHHHH
Q 011874 400 GRVPALNC-----TPSFITDLADAV 419 (475)
Q Consensus 400 ~rvp~LNd-----sp~fI~aLadlV 419 (475)
..+..|.. ...+++.|.+.+
T Consensus 250 ~~ld~l~~~~~~~~~~Y~~~m~~n~ 274 (284)
T 2prs_A 250 GTLDPLGTNIKLGKTSYSEFLSQLA 274 (284)
T ss_dssp EECCTTCTTSCCSTTHHHHHHHHHH
T ss_pred EEeccCcccCCCCcccHHHHHHHHH
Confidence 45544543 125777665544
No 39
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=23.90 E-value=4.8e+02 Score=25.62 Aligned_cols=112 Identities=10% Similarity=0.074 Sum_probs=57.2
Q ss_pred ccCCCHHH---HHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHHhccCCCCCEEEeccCCCChHHHHH---HH
Q 011874 198 YWYPFTEE---AVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNS---MA 271 (475)
Q Consensus 198 Y~~P~ied---al~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~v~~I~~~~~~p~yI~a---la 271 (475)
=+.|+..+ +++++.++| ++|+.+++.-.-|.+ -.+...+.+.+.+ .+|+.++.+|++-...-++--. .+
T Consensus 96 TSqPs~~~~~~~f~~l~~~g-~~Ii~I~iSS~LSGT--y~sA~~Aa~~~~e--~~~~~~I~ViDS~~~s~g~g~lv~~Aa 170 (320)
T 3pl5_A 96 TSQVNVGQFESYFRQSAENG-QEVLYIAFSSVLSGT--YQSAVMARDIVLE--EYPQASIEIVDTLAATGGEGYLAMLAA 170 (320)
T ss_dssp EECCCHHHHHHHHHHHHHTT-CCEEEEECCTTTCTH--HHHHHHHHHHHHH--HCTTCCEEEEECCCCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHCC-CeEEEEecCchHhHH--HHHHHHHHHHHHh--hCCCCeEEEEcCCchHHHHHHHHHHHH
Confidence 35777766 555777788 899999997655432 2222333333333 2466789999998765443211 11
Q ss_pred HH---------HHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHH
Q 011874 272 DL---------IQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRL 323 (475)
Q Consensus 272 ~~---------I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L 323 (475)
+. |.+.+++. .+.+.++|+.-.| .+..+.|- +-.++..|...|
T Consensus 171 ~l~~~G~s~eeI~~~le~~--~~~~~~~f~v~~L--~yL~kGGR-----Is~~~a~iG~lL 222 (320)
T 3pl5_A 171 QAREEGKSLKETKELILDV--GPRLRTFFLVDNL--YHLMRGGR-----LSKTSAIVGSLV 222 (320)
T ss_dssp HHHHTTCCHHHHHHHHHHH--GGGEEEEEECSCS--HHHHHHTC-----CC--------CT
T ss_pred HHHhcCCCHHHHHHHHHHH--HhhceEEEEECCh--HHHHhCCC-----ccHHHHHHHhhh
Confidence 11 22223222 2456788887666 34434443 234555566666
No 40
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=23.77 E-value=4.2e+02 Score=24.18 Aligned_cols=54 Identities=9% Similarity=-0.132 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEEEee--eccCCCH-HHHHHHHHHCCCCEEEEEecCC
Q 011874 170 KITDEQAQALKTALEAKNLPVNVYVGM--RYWYPFT-EEAVQQIKRDRITRLVVLPLYP 225 (475)
Q Consensus 170 ~~T~~qa~~L~~~L~~~~~~~~V~~am--rY~~P~i-edal~~l~~~Gv~rIvvlPLyP 225 (475)
.+.....+.+++.+++.| +.+.+.. .|..|.- .+.++++.+.+++-|++.|..+
T Consensus 16 ~~~~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~ 72 (297)
T 3rot_A 16 PYWTSLFQGAKKAAEELK--VDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSD 72 (297)
T ss_dssp HHHHHHHHHHHHHHHHHT--CEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCS
T ss_pred chHHHHHHHHHHHHHHhC--cEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 344555667777777665 4444332 2222222 2567788888999888877644
No 41
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=23.47 E-value=4.4e+02 Score=24.61 Aligned_cols=81 Identities=15% Similarity=0.231 Sum_probs=42.1
Q ss_pred eEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCC----------CCCCCHHHHHHH
Q 011874 287 VMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVK----------WLKPYTDEVLVE 356 (475)
Q Consensus 287 ~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~----------WL~P~t~d~L~~ 356 (475)
..+|+..|..|-.. ...++.+..+..+..+.|+++.+. . +-.+.|+- +-++ | .....++++.
T Consensus 79 i~Vild~h~~~~~~-~~~~~~~~~~~~~~w~~ia~~~k~--~--~~vv~~el--~NEP~~~~~~~~~~w-~~~~~~~~~~ 150 (302)
T 1bqc_A 79 LICMLEVHDTTGYG-EQSGASTLDQAVDYWIELKSVLQG--E--EDYVLINI--GNEPYGNDSATVAAW-ATDTSAAIQR 150 (302)
T ss_dssp CEEEEEEGGGTTTT-TSTTCCCHHHHHHHHHHTHHHHTT--C--TTTEEEEC--SSSCCCSCHHHHTTH-HHHHHHHHHH
T ss_pred CEEEEEeccCCCCC-CCCchhhHHHHHHHHHHHHHHhcC--C--CCEEEEEe--CCCCCCCCCcchhhH-HHHHHHHHHH
Confidence 46777888766321 111133566666666677777632 1 22256654 2222 2 1234455555
Q ss_pred hhhcCCceEEEEcc-ccccc
Q 011874 357 LGQKGVKSLLAIPV-SFVSE 375 (475)
Q Consensus 357 L~~~G~k~VvVvPi-gFvsD 375 (475)
..+.+.++++++.. +|-.|
T Consensus 151 IR~~dp~~~i~v~~~~~~~~ 170 (302)
T 1bqc_A 151 LRAAGFEHTLVVDAPNWGQD 170 (302)
T ss_dssp HHHTTCCSCEEEECTTTTTC
T ss_pred HHhcCCCcEEEECCCccccC
Confidence 55667777777753 34444
No 42
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=23.24 E-value=58 Score=34.29 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=34.3
Q ss_pred CCCHHHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCc
Q 011874 347 KPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIE 397 (475)
Q Consensus 347 ~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~ 397 (475)
.+.+.++++++.+.|+| ++|+.=||- .++..+.++.|++.|+.
T Consensus 46 a~~v~~~v~e~~~~Gv~-~viis~Gf~-------~~~~~~l~~~A~~~g~r 88 (480)
T 3dmy_A 46 GEYAAELANQALDRNLN-VMMFSDNVT-------LEDEIQLKTRAREKGLL 88 (480)
T ss_dssp HHHHHHHHHHHHHTTCE-EEECCCCCC-------HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCC-EEEECCCCC-------HHHHHHHHHHHHHcCCE
Confidence 36889999999999999 888777775 24456788889888874
No 43
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=22.77 E-value=4.1e+02 Score=23.73 Aligned_cols=69 Identities=10% Similarity=0.099 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHH
Q 011874 170 KITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (475)
Q Consensus 170 ~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (475)
..|+..++.+.+.+.+.+. +|.+-.-+..+.+++..+++.+. |.||+ .+|-|-.+..+.....+++.+.
T Consensus 30 s~~~~l~~~~~~~~~~~g~--~v~~~dL~~~~d~~~~~~~l~~A--D~iV~--~~P~y~~s~pa~LK~~iDrv~~ 98 (204)
T 2amj_A 30 QLNDTLTEVADGTLRDLGH--DVRIVRADSDYDVKAEVQNFLWA--DVVIW--QMPGWWMGAPWTVKKYIDDVFT 98 (204)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EEEEEESSSCCCHHHHHHHHHHC--SEEEE--EEECBTTBCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCC--EEEEEeCCccccHHHHHHHHHhC--CEEEE--ECCccccCCCHHHHHHHHHHhh
Confidence 6888999999998887653 44443334466788888888764 54433 2555666666666666666554
No 44
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=22.75 E-value=74 Score=24.19 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcCCC---------ceEEEeeeccCCCHHHHHHHHHHCCCC
Q 011874 173 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRIT 216 (475)
Q Consensus 173 ~~qa~~L~~~L~~~~~~---------~~V~~amrY~~P~iedal~~l~~~Gv~ 216 (475)
+..|+.+.+.|...|.+ ++|.+|---..--.+++.++|++.|++
T Consensus 20 ~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~~g~~ 72 (79)
T 1x60_A 20 KANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFD 72 (79)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHHcCCc
Confidence 45677777777665432 444444211112233445555555654
No 45
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=22.56 E-value=5.2e+02 Score=24.84 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=33.4
Q ss_pred CCceEEEeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCcccccChHHHHHHHHH
Q 011874 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQN 241 (475)
Q Consensus 188 ~~~~V~~amrY~~P~iedal~~l---~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~ 241 (475)
..++|..| -+..+++++++.. .+.|++-++++| |.|...|-....+.+.+
T Consensus 84 grvpviaG--vg~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ 136 (304)
T 3cpr_A 84 DRAKLIAG--VGTNNTRTSVELAEAAASAGADGLLVVT--PYYSKPSQEGLLAHFGA 136 (304)
T ss_dssp TTSEEEEE--CCCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHH
T ss_pred CCCcEEec--CCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHH
Confidence 35777777 4678899998754 457999998887 55655554444443433
No 46
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=22.52 E-value=3.8e+02 Score=25.99 Aligned_cols=51 Identities=12% Similarity=0.018 Sum_probs=33.5
Q ss_pred CCCceEEEeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCcc---cccChHHHHHHHHH
Q 011874 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQF---SISTTGSSIRVLQN 241 (475)
Q Consensus 187 ~~~~~V~~amrY~~P~iedal~~l---~~~Gv~rIvvlPLyPqY---S~sTtgS~~~~l~~ 241 (475)
...++|..|- +...++++++.. .+.|++-++++| |.| ...|-....+.+..
T Consensus 75 ~grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--Pyy~~~~~~s~~~l~~~f~~ 131 (309)
T 3fkr_A 75 AGRVPVIVTT--SHYSTQVCAARSLRAQQLGAAMVMAMP--PYHGATFRVPEAQIFEFYAR 131 (309)
T ss_dssp TTSSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEECC--SCBTTTBCCCHHHHHHHHHH
T ss_pred CCCCcEEEec--CCchHHHHHHHHHHHHHcCCCEEEEcC--CCCccCCCCCHHHHHHHHHH
Confidence 3457787774 778899998854 457999999987 666 23344444443333
No 47
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=22.48 E-value=5.1e+02 Score=24.71 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=41.2
Q ss_pred CchHHHHHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCcccccChHHHHHHHHH
Q 011874 166 SPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQN 241 (475)
Q Consensus 166 SPL~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~~l---~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~ 241 (475)
++.....|+. +.++...+.....++|..|- +..+++++++.. .+.|++-++++| |.|...|-....+.+.+
T Consensus 47 ~~~Ls~~Er~-~v~~~~~~~~~grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ 120 (294)
T 2ehh_A 47 SPTLTFEEHE-KVIEFAVKRAAGRIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFKT 120 (294)
T ss_dssp GGGSCHHHHH-HHHHHHHHHHTTSSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHH
T ss_pred hhhCCHHHHH-HHHHHHHHHhCCCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHH
Confidence 4554444332 22332233323357777774 678899998754 457999998887 55655555444444433
No 48
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=22.31 E-value=85 Score=28.69 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=38.0
Q ss_pred CCCCCCCHHHHHHHhhhcCCceEEEEcc--cccccchhhHHHHHHHHH-HHHHHcCCc
Q 011874 343 VKWLKPYTDEVLVELGQKGVKSLLAIPV--SFVSEHIETLEEIDMEYK-ELALESGIE 397 (475)
Q Consensus 343 ~~WL~P~t~d~L~~L~~~G~k~VvVvPi--gFvsDhlETL~EIDiE~r-e~a~e~G~~ 397 (475)
.-|+.|-+.+-++.|.+.|+ .|+|+ ||.. ..++++|+-.... +..+..|++
T Consensus 127 ~m~~~~~~~~N~~~L~~~G~---~ivpp~~g~~~-~p~si~div~~~v~~~ld~~~i~ 180 (189)
T 2ejb_A 127 EAPYNEIHLENMLKITRMGG---VVVPASPAFYH-KPQSIDDMINFVVGKLLDVLRIE 180 (189)
T ss_dssp CSSCCHHHHHHHHHHHHTTC---EEEECCCCSTT-CCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHCCe---EEeCCChHHhh-CCCCHHHHHHHHHHHHHHhCCCC
Confidence 45999999999999999874 56666 7754 6777888766654 455677774
No 49
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=22.02 E-value=2.6e+02 Score=23.94 Aligned_cols=65 Identities=14% Similarity=0.245 Sum_probs=35.0
Q ss_pred HHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEEcCCCCCCH--HHHHHHHHHHHHHc
Q 011874 351 DEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTP--SFITDLADAVIEAL 423 (475)
Q Consensus 351 ~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~rvp~LNdsp--~fI~aLadlV~e~l 423 (475)
...++.|+++|++-|+.. ..+. |. .+. .+..+.+++.|+ ++..+|+--.++ .-++.+.+.+.+..
T Consensus 30 ~a~a~~La~~Ga~vvi~~----r~~~-e~-~~~-~~~~~~~~~~G~-~~~~i~~Dv~~~~~~~v~~~~~~i~~~~ 96 (157)
T 3gxh_A 30 EQQFSLLKQAGVDVVINL----MPDS-SK-DAH-PDEGKLVTQAGM-DYVYIPVDWQNPKVEDVEAFFAAMDQHK 96 (157)
T ss_dssp HHHHHHHHHTTCCEEEEC----SCTT-ST-TSC-TTHHHHHHHTTC-EEEECCCCTTSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEC----CCcc-cc-ccc-ccHHHHHHHcCC-eEEEecCCCCCCCHHHHHHHHHHHHhcC
Confidence 456677888888655431 1211 10 000 012334456677 477888755566 66666666666543
No 50
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=21.52 E-value=69 Score=29.92 Aligned_cols=51 Identities=16% Similarity=0.217 Sum_probs=38.4
Q ss_pred CCCCCCCHHHHHHHhhhcCCceEEEEcc--cccccchhhHHHHHHHH-HHHHHHcCCc
Q 011874 343 VKWLKPYTDEVLVELGQKGVKSLLAIPV--SFVSEHIETLEEIDMEY-KELALESGIE 397 (475)
Q Consensus 343 ~~WL~P~t~d~L~~L~~~G~k~VvVvPi--gFvsDhlETL~EIDiE~-re~a~e~G~~ 397 (475)
+-|+.|-+.+-+..|.+.|+ +|+|+ ||.+ +.+|++||-... .+.....|++
T Consensus 140 em~~~~~~~~Nm~~L~~~G~---~iipp~~g~ya-~p~~iediv~~vv~r~ld~lgi~ 193 (209)
T 3zqu_A 140 EAPFSSIHLENMLKLSNLGA---VILPAAPGFYH-QPQSVEDLVDFVVARILNTLGIP 193 (209)
T ss_dssp CSSCCHHHHHHHHHHHHHTC---EECCSCCCCTT-CCCSHHHHHHHHHHHHHHHHTCC
T ss_pred ccccCHHHHHHHHHHHHCCC---EEeCCCccccc-CCCCHHHHHHHHHHHHHHhCCCC
Confidence 56999999999999999986 56665 7775 667777765444 4566677874
No 51
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=21.33 E-value=1.6e+02 Score=28.07 Aligned_cols=20 Identities=20% Similarity=0.436 Sum_probs=11.2
Q ss_pred HHHHHHHHHHCCCCEEEEEe
Q 011874 203 TEEAVQQIKRDRITRLVVLP 222 (475)
Q Consensus 203 iedal~~l~~~Gv~rIvvlP 222 (475)
+.|.++.+.+.|+++||++-
T Consensus 99 l~di~~sl~~~G~rrlvivN 118 (254)
T 3lub_A 99 LEDIVSSLHVQGFRKLLILS 118 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEe
Confidence 44455555555666666654
No 52
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.20 E-value=3.1e+02 Score=26.13 Aligned_cols=50 Identities=12% Similarity=-0.017 Sum_probs=34.1
Q ss_pred eeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHH
Q 011874 195 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (475)
Q Consensus 195 amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~ 245 (475)
+...++|..++++++..+.|+++++++. -+.|....+..+-..+.+++++
T Consensus 61 av~~G~~~~~~~lr~ala~GaD~vi~v~-d~~~~~~~~~~~a~~La~~i~~ 110 (264)
T 1o97_C 61 VVSVGPDRVDESLRKCLAKGADRAVRVW-DDAAEGSDAIVVGRILTEVIKK 110 (264)
T ss_dssp EEEESCGGGHHHHHHHHHTTCSEEEEEC-CGGGTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCchhHHHHHHHHHhcCCCEEEEEc-CcccccCCHHHHHHHHHHHHHh
Confidence 4555777789999999899999999997 4555444444444444444443
No 53
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=21.07 E-value=4.8e+02 Score=25.33 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHH---HHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHH
Q 011874 172 TDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQ---QIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (475)
Q Consensus 172 T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~---~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~ 245 (475)
.++..+.++...+..+..++|..| -+...++++++ ...+.|++-++++| |.|...|-....+.+.+..+.
T Consensus 75 ~~Er~~v~~~~v~~~~grvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a 147 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVKGRIPVIAG--TGANSTREAVALTEAAKSGGADACLLVT--PYYNKPTQEGMYQHFRHIAEA 147 (314)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHh
No 54
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=20.79 E-value=5e+02 Score=24.86 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=33.2
Q ss_pred CCceEEEeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCcccccChHHHHHHHHH
Q 011874 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQN 241 (475)
Q Consensus 188 ~~~~V~~amrY~~P~iedal~~l---~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~ 241 (475)
..++|..| -+...++++++.. .+.|++-++++| |.|...|-....+.+.+
T Consensus 75 grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ 127 (297)
T 3flu_A 75 KRVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVV--PYYNKPSQEGIYQHFKT 127 (297)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHH
Confidence 45777776 4678899998854 567999998886 44555554444443333
No 55
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=20.73 E-value=1.9e+02 Score=28.13 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=39.5
Q ss_pred cCCCHHH---HHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHHhccCCCCCEEEeccCCCChH
Q 011874 199 WYPFTEE---AVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREG 265 (475)
Q Consensus 199 ~~P~ied---al~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~v~~I~~~~~~p~ 265 (475)
+.|+..+ +.+++.++| ++|+.+++.-.-|. |-.+...+.+.+.+ .+|+.++++|++-...-+
T Consensus 66 Sqps~~~~~~~f~~l~~~g-~~ii~i~iSs~LSG--Ty~sA~~aa~~~~e--~~~~~~I~ViDS~~~s~g 130 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQG-FPVVCFTITTLFSG--SYNSAINAKSLVLE--DYPDANICVIDSKQNTVT 130 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTT-CCEEEEESCTTTCS--HHHHHHHHHHHHHH--HCTTCCEEEEECSCCHHH
T ss_pred cCCCHHHHHHHHHHHHHCC-CeEEEEECCCcHhH--HHHHHHHHHHHHHh--hCCCCeEEEEeCCchHHH
Confidence 6788765 556777788 99999999766543 22222333333323 245678999999876444
No 56
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=20.61 E-value=5.3e+02 Score=24.49 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=68.6
Q ss_pred EeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCC--CCeE
Q 011874 256 IIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGIN--NDHT 333 (475)
Q Consensus 256 ~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~--~~~~ 333 (475)
.=++.|-+|.....+++.|.++|.+.. |+.. .+.++|.+.|..++.+.-+.+.+.+.. ++ ...-
T Consensus 101 ~dPHvWldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~ld~~~~~~l~~--~~~~~~~~ 166 (282)
T 3mfq_A 101 VDPHFWFSIPLYKSAVAVASEELQKLL-PAKA-----------EMIQKNTEKYQAQLDDLHAWVEKELSV--IPKESRYL 166 (282)
T ss_dssp ECCCGGGSHHHHHHHHHHHHHHHTTTC-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHTT--SCGGGCEE
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHhC-hhhH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccCcEE
Confidence 345778899999999999999998763 2211 112245567888888888888877742 21 1222
Q ss_pred EEEeCC-------C--------CCCCCCCCCH---HHHHHHhhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcC
Q 011874 334 LAYQSR-------V--------GPVKWLKPYT---DEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESG 395 (475)
Q Consensus 334 lafQSr-------~--------Gp~~WL~P~t---~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G 395 (475)
++|... . |..+=-+|+. .+.++.+.+.|++-| ++-..|-..-.|+| .+.|++.|
T Consensus 167 vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~i-f~e~~~~~~~~~~l-------~~~a~~~g 238 (282)
T 3mfq_A 167 VTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAI-FTESTTNPERMKKL-------QEAVKAKG 238 (282)
T ss_dssp ECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEE-ECBTTSCTHHHHHH-------HHHHHTTS
T ss_pred EEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEE-EEeCCCChHHHHHH-------HHHHHhcC
Confidence 222111 1 2111124543 334444555677555 44556655667764 44567778
Q ss_pred Cc
Q 011874 396 IE 397 (475)
Q Consensus 396 ~~ 397 (475)
..
T Consensus 239 ~~ 240 (282)
T 3mfq_A 239 GQ 240 (282)
T ss_dssp CC
T ss_pred Cc
Confidence 75
No 57
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=20.44 E-value=3.7e+02 Score=26.03 Aligned_cols=134 Identities=13% Similarity=0.112 Sum_probs=70.4
Q ss_pred CCCc-hHHHHHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHH
Q 011874 164 GGSP-LRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (475)
Q Consensus 164 ggSP-L~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~ 242 (475)
|.+| -.+-|-++.++|++ .++-|+.|.-| +|++++.++.+...+. .++.+...-.......-.+. ...
T Consensus 52 g~dPH~yeptp~d~~~l~~------ADlvv~~G~~l-E~w~~k~~~~~~~~~~---~~v~~s~~i~~~~~~~~~~~-~~~ 120 (312)
T 2o1e_A 52 SVEPHDWEPTPKDIANIQD------ADLFVYNSEYM-ETWVPSAEKSMGQGHA---VFVNASKGIDLMEGSEEEHE-EHD 120 (312)
T ss_dssp TSCTTTCCCCHHHHHHHHH------SSEEEESCTTT-STTHHHHHHTTCSSSC---EEEETTTTCCCCCC----------
T ss_pred CCCCccccCCHHHHHHHhc------CCEEEEcCCCh-HhHHHHHHHhcccCCC---eEEEecCCcccccCcccccc-ccc
Confidence 3344 33446677777764 37788888655 4688888876533322 22322211000000000000 000
Q ss_pred HHHhccCCCCCEEEeccCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHH
Q 011874 243 FREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQR 322 (475)
Q Consensus 243 ~~~~~~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~ 322 (475)
..... ... ..=+++|-+|.....+++.|.++|.+.. |+.. .+.++|.+.|..++.+.-+.+.+.
T Consensus 121 ~~~~~-~~~---~~DPHvWldp~n~~~~a~~I~~~L~~~D-P~~a-----------~~Y~~N~~~~~~~L~~Ld~~~~~~ 184 (312)
T 2o1e_A 121 HGEHE-HSH---AMDPHVWLSPVLAQKEVKNITAQIVKQD-PDNK-----------EYYEKNSKEYIAKLQDLDKLYRTT 184 (312)
T ss_dssp --------C---CCCCGGGGSHHHHHHHHHHHHHHHHHHC-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-cCC---CCCCCcccCHHHHHHHHHHHHHHHHHhC-chhH-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000 1234788999999999999999998763 2211 112345667888888887777777
Q ss_pred Hh
Q 011874 323 LK 324 (475)
Q Consensus 323 L~ 324 (475)
+.
T Consensus 185 l~ 186 (312)
T 2o1e_A 185 AK 186 (312)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 58
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=20.43 E-value=5.4e+02 Score=24.23 Aligned_cols=50 Identities=4% Similarity=-0.055 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEeeeccCCCHHHHHHHHHHCCCCEEEEEe
Q 011874 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLP 222 (475)
Q Consensus 171 ~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~iedal~~l~~~Gv~rIvvlP 222 (475)
+.....+.+++.+.+.| +.+.+.-....+..++.++++.+.|++-|++.+
T Consensus 21 f~~~~~~Gi~~~~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~~~dgIi~~~ 70 (318)
T 2fqx_A 21 FNQQVWEGISRFAQENN--AKCKYVTASTDAEYVPSLSAFADENMGLVVACG 70 (318)
T ss_dssp HHHHHHHHHHHHHHHTT--CEEEEEECCSGGGHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHHHHHhC--CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 55566677777777665 444443333344566789999999999888875
No 59
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.39 E-value=5.7e+02 Score=24.48 Aligned_cols=95 Identities=20% Similarity=0.273 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHH---hhhcCCceEEEEcccccccchhhHHHHHH
Q 011874 309 RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVE---LGQKGVKSLLAIPVSFVSEHIETLEEIDM 385 (475)
Q Consensus 309 ~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~---L~~~G~k~VvVvPigFvsDhlETL~EIDi 385 (475)
.+|-.+.++.+.+... |. +..+.-.. | ..+|.++++. ..+.|+..++++||.|..-.-|.|++
T Consensus 59 ~~Er~~v~~~~~~~~~--g~--rvpviaGv--g-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~--- 124 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCK--GT--KVKVLAGA--G-----SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYE--- 124 (301)
T ss_dssp HHHHHHHHHHHHHHHT--TS--SCEEEEEC--C-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhC--CC--CCeEEEeC--C-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 4566667777777762 20 23333322 3 4788888775 45679999999999887644444444
Q ss_pred HHHHHHHHcCCceEEE-cC---CCCCCHHHHHHHHH
Q 011874 386 EYKELALESGIENWGR-VP---ALNCTPSFITDLAD 417 (475)
Q Consensus 386 E~re~a~e~G~~~~~r-vp---~LNdsp~fI~aLad 417 (475)
-++++++..+..-+.| +| -.+-+|+.+..|++
T Consensus 125 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 125 HYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFR 160 (301)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHh
Confidence 5788888776653333 33 35777887777765
No 60
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=20.30 E-value=5.3e+02 Score=24.27 Aligned_cols=133 Identities=16% Similarity=0.219 Sum_probs=74.8
Q ss_pred CCCHHHHHHHHHHCCCCEEEEEecCCcccccChHHHHHHHHHHHHHhccCCCCCEEEeccCCCChHHHHHHHHHHHHHHh
Q 011874 200 YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELG 279 (475)
Q Consensus 200 ~P~iedal~~l~~~Gv~rIvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~v~~I~~~~~~p~yI~ala~~I~~~l~ 279 (475)
.+..++-++.|++.|+.-|-+ |+. ++... .+. .+|..+|.+++.+.+.|..+.+
T Consensus 40 ~~~~~~d~~~l~~~G~n~vRi-~i~--w~~~~-----------------~~~------~~~~~~~~~~~~~d~~v~~a~~ 93 (320)
T 3nco_A 40 VYIEDEYFKIIKERGFDSVRI-PIR--WSAHI-----------------SEK------YPYEIDKFFLDRVKHVVDVALK 93 (320)
T ss_dssp CCCCHHHHHHHHHHTCCEEEE-CCC--GGGSB-----------------CSS------TTCCBCHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHCCCCEEEE-eee--hHHhc-----------------CCC------CCCccCHHHHHHHHHHHHHHHH
Confidence 456688899999999987665 431 11100 000 1344567777666666665543
Q ss_pred hcCCCCceEEEEecCCCchhhhhccCCChHHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCC-------CHHH
Q 011874 280 KFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKP-------YTDE 352 (475)
Q Consensus 280 ~~~~~~~~~LLFSaHglP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P-------~t~d 352 (475)
....+++..|..+--.- +.+.+.....+..+.|+++.+. . +-.+.|+- +-+++... ...+
T Consensus 94 -----~Gi~vildlh~~~~~~~--~~~~~~~~~~~~~~~ia~~~~~--~--~~vv~~~l--~NEP~~~~~~~~~~~~~~~ 160 (320)
T 3nco_A 94 -----NDLVVIINCHHFEELYQ--APDKYGPVLVEIWKQVAQAFKD--Y--PDKLFFEI--FNEPAQNLTPTKWNELYPK 160 (320)
T ss_dssp -----TTCEEEEECCCCHHHHH--CHHHHHHHHHHHHHHHHHHHTT--S--CTTEEEEC--CSCCCTTSCHHHHHHHHHH
T ss_pred -----CCCEEEEEcCCCccccc--CcHHHHHHHHHHHHHHHHHHcC--C--CceEEEEe--ccCCCCCCCHHHHHHHHHH
Confidence 23567888888764221 1122566666677777777732 2 32367765 33444321 2344
Q ss_pred HHHHhhhcCCceEEEEccc
Q 011874 353 VLVELGQKGVKSLLAIPVS 371 (475)
Q Consensus 353 ~L~~L~~~G~k~VvVvPig 371 (475)
+++...+.+.+++++++..
T Consensus 161 ~~~~IR~~dp~~~i~v~~~ 179 (320)
T 3nco_A 161 VLGEIRKTNPSRIVIIDVP 179 (320)
T ss_dssp HHHHHHHHCSSCCEEEECS
T ss_pred HHHHHHhcCCCcEEEECCC
Confidence 4555555577777777643
No 61
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=20.12 E-value=2.3e+02 Score=27.20 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCCCCCCCCCCCCHHHHHHH---hhhcCCceEEEEcccccccchhhHHHHHH
Q 011874 309 RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVE---LGQKGVKSLLAIPVSFVSEHIETLEEIDM 385 (475)
Q Consensus 309 ~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~Gp~~WL~P~t~d~L~~---L~~~G~k~VvVvPigFvsDhlETL~EIDi 385 (475)
.+|-.+.++.+.+.... +..+--. +| ..+|.++++. ..+.|+..++++||.|..-.-|-|++
T Consensus 54 ~~Er~~v~~~~~~~~~g-----rvpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 118 (292)
T 3daq_A 54 TDEKELILKTVIDLVDK-----RVPVIAG--TG-----TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVK--- 118 (292)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCEEEE--CC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEe--CC-----cccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHH---
Confidence 46666677777777621 2223222 23 4788888775 45569999999999887654444444
Q ss_pred HHHHHHHHcCCceEEE-cC---CCCCCHHHHHHHHH
Q 011874 386 EYKELALESGIENWGR-VP---ALNCTPSFITDLAD 417 (475)
Q Consensus 386 E~re~a~e~G~~~~~r-vp---~LNdsp~fI~aLad 417 (475)
-++++++..+..-+.| +| -.+-+++.+..|++
T Consensus 119 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 119 HFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 5788888766654433 33 35777888777765
No 62
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=20.04 E-value=3e+02 Score=26.87 Aligned_cols=136 Identities=12% Similarity=0.187 Sum_probs=78.3
Q ss_pred EEEeccCCCC-hHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCchhhhhccCCCh---HHHHHHHHHHHHHHHhccCCC
Q 011874 254 VSIIRSWYQR-EGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPY---RDQMEECIYLIMQRLKDRGIN 329 (475)
Q Consensus 254 v~~I~~~~~~-p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHglP~~~v~~~GDpY---~~q~~~t~~~v~e~L~~~g~~ 329 (475)
.-.+.+|.++ .-=.+++.++|+..++. +- + .|+.. |. .|..+ .+|-.+.++.+.+....
T Consensus 28 ~alvTPf~~dg~iD~~~l~~li~~li~~-Gv-~--Gl~v~--Gt-------TGE~~~Ls~~Er~~v~~~~v~~~~g---- 90 (315)
T 3si9_A 28 TALITPFDDNGAIDEKAFCNFVEWQITQ-GI-N--GVSPV--GT-------TGESPTLTHEEHKRIIELCVEQVAK---- 90 (315)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHT-TC-S--EEECS--ST-------TTTGGGSCHHHHHHHHHHHHHHHTT----
T ss_pred EeeECCCCCCCCcCHHHHHHHHHHHHHc-CC-C--EEEeC--cc-------ccCccccCHHHHHHHHHHHHHHhCC----
Confidence 4557777643 33445666666655542 11 1 23211 21 24333 45666677777777621
Q ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHH---hhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHHcCCceEEE-cC--
Q 011874 330 NDHTLAYQSRVGPVKWLKPYTDEVLVE---LGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGR-VP-- 403 (475)
Q Consensus 330 ~~~~lafQSr~Gp~~WL~P~t~d~L~~---L~~~G~k~VvVvPigFvsDhlETL~EIDiE~re~a~e~G~~~~~r-vp-- 403 (475)
+..+.-. +| ..+|.++++. ..+.|+..++++||.|..-.-|-|+ .-++++++..+..-+.| +|
T Consensus 91 -rvpViaG--vg-----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~---~~f~~va~a~~lPiilYn~P~~ 159 (315)
T 3si9_A 91 -RVPVVAG--AG-----SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLY---THFSSIAKAISIPIIIYNIPSR 159 (315)
T ss_dssp -SSCBEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH---HHHHHHHHHCSSCEEEEECHHH
T ss_pred -CCcEEEe--CC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH---HHHHHHHHcCCCCEEEEeCchh
Confidence 2222222 23 4788888775 4567999999999988764444444 45788888777654433 33
Q ss_pred -CCCCCHHHHHHHHH
Q 011874 404 -ALNCTPSFITDLAD 417 (475)
Q Consensus 404 -~LNdsp~fI~aLad 417 (475)
-.+-+|+.+..|++
T Consensus 160 tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 160 SVIDMAVETMRDLCR 174 (315)
T ss_dssp HSCCCCHHHHHHHHH
T ss_pred hCCCCCHHHHHHHHh
Confidence 25677777766664
No 63
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=20.02 E-value=63 Score=29.90 Aligned_cols=51 Identities=22% Similarity=0.285 Sum_probs=36.2
Q ss_pred CCCCCCCHHHHHHHhhhcCCceEEEEcc--cccccchhhHHHHHHHH-HHHHHHcCCc
Q 011874 343 VKWLKPYTDEVLVELGQKGVKSLLAIPV--SFVSEHIETLEEIDMEY-KELALESGIE 397 (475)
Q Consensus 343 ~~WL~P~t~d~L~~L~~~G~k~VvVvPi--gFvsDhlETL~EIDiE~-re~a~e~G~~ 397 (475)
.-|+.|-+.+-++.|.+.| +.++|+ ||..+ -+++.|+-... .......|++
T Consensus 123 ~m~~~~~~~~N~~~L~~~G---~~ivpp~~g~~~~-p~~i~~~v~~~v~r~ld~~~i~ 176 (197)
T 1sbz_A 123 EMPLSTIHLENMLALSRMG---VAMVPPMPAFYNH-PETVDDIVHHVVARVLDQFGLE 176 (197)
T ss_dssp CSSBCHHHHHHHHHHHTTT---CEECCCCCCCTTC-CCBHHHHHHHHHHHHHGGGTCC
T ss_pred CCCCCHHHHHHHHHHHHCC---CEEECCCCcccCC-CCCHHHHHHHHHHHHHHhCCCC
Confidence 4599999999999999988 467776 77775 44555554444 4455677774
Done!