BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011878
(475 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359489412|ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
vinifera]
Length = 690
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/462 (77%), Positives = 408/462 (88%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDVSPSMH+ LP+VEKLCS L+QKKLIY KN EVG++LFGTE+T NELT
Sbjct: 1 MARNKEALLLLLDVSPSMHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KEVGGYEHV VL+ IKVVDG LV++L+ LP+GT AGDFLDAIVVG+DMLIKK+G T KGK
Sbjct: 61 KEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT ALCP+KDP GTKEDQ+ TIA QM A G++++ IV R LSG MR++ EN
Sbjct: 121 KRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL +FS K++AKTL+V++ TSL GA +TR I+PVTIFRGDLELS KM+IKVWVYKKT
Sbjct: 181 DLLLKLFSTKTTAKTLYVETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EE+FPTLK+YSD+AP TDKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PIS
Sbjct: 241 EERFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGFTDASN++RHYYM DVN+FIAEP N++A +AVSALARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ SVV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P
Sbjct: 361 MNKVAILRCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
SWQPNE+QQEAADNLVKMLDLAPSG E L P+LTPNP LE
Sbjct: 421 ASWQPNEEQQEAADNLVKMLDLAPSGSKETLLPDLTPNPVLE 462
>gi|255541318|ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus communis]
gi|223548903|gb|EEF50392.1| ku P80 DNA helicase, putative [Ricinus communis]
Length = 684
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/462 (77%), Positives = 408/462 (88%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+LLLDV PSMH+VLP++E++CS LIQKKLIY K+ EVG+++FGTEET NELT
Sbjct: 1 MARNREGLILLLDVGPSMHNVLPEIERICSMLIQKKLIYSKSDEVGIVVFGTEETVNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGYEHV VLQ++KVVDG LV++L HLP+GT AGD+LDAIVVG+DM+IKKY T KGK
Sbjct: 61 VEVGGYEHVLVLQNMKVVDGDLVEALHHLPRGTVAGDYLDAIVVGMDMMIKKYQLTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLITDA P+K+P GTKEDQVSTIA QM A G+RM+ IVVR S + R++ EN
Sbjct: 121 KRLCLITDAGNPIKEPYEGTKEDQVSTIALQMAAHGVRMETIVVRGRPSQDIDQRIVDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LL++FS+K+SAKT++V+S TSL GA +TR+ISPVTIFRGDLE+S K+KIKVWVYKKT
Sbjct: 181 DHLLHLFSEKTSAKTVYVESPTSLLGALRTRNISPVTIFRGDLEISPKLKIKVWVYKKTS 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKK SDKAP TDK+ATHEVKVDYEYKSVEDP+KVVPP+QRIKGYRYGPQV+PIS
Sbjct: 241 EEKFPTLKKRSDKAPPTDKYATHEVKVDYEYKSVEDPNKVVPPDQRIKGYRYGPQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAE +AVKFKPEKSVKLLGFTDA+NILRHYYMKDVN+FIAEPGN RAT+AVSALARAMKE
Sbjct: 301 SAELDAVKFKPEKSVKLLGFTDAANILRHYYMKDVNIFIAEPGNMRATIAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK PDSFYFNVLPFAEDVREFQFPSFS FP
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNLSEKDKTPDSFYFNVLPFAEDVREFQFPSFSNFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
SWQP+EQQQEAADNLV MLDLA GK E+L P+ TPNP LE
Sbjct: 421 ASWQPSEQQQEAADNLVMMLDLATPGKEEVLLPDFTPNPILE 462
>gi|224130002|ref|XP_002320725.1| predicted protein [Populus trichocarpa]
gi|222861498|gb|EEE99040.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/480 (74%), Positives = 407/480 (84%), Gaps = 18/480 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV P+M+SVLP+++K+CS LIQKKLIYGK EVGV++FGT+ET+NELT
Sbjct: 1 MARNKEGLVLLLDVGPTMYSVLPEIKKVCSMLIQKKLIYGKFDEVGVVVFGTQETDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF------------------LDAI 102
KEVGGYEHV VL++IKVVDG LV + + LP+G GD LDAI
Sbjct: 61 KEVGGYEHVVVLRNIKVVDGDLVDAFQELPRGNFDGDCIHWIFLYYLFWKFMLCADLDAI 120
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VVG+DMLIKKY T KGKK LCLIT+ALCP+KD GTKEDQV+TIA QM A G++M+++
Sbjct: 121 VVGMDMLIKKYQATNKGKKRLCLITNALCPIKDSCEGTKEDQVNTIAAQMSAHGMKMESV 180
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
+VR L G R++ END LLN+FS+K+SA+ ++V+S T+L GA KTR+ISPVTIFRGD
Sbjct: 181 IVRGRLCGGGDQRIMAENDRLLNLFSEKTSARAVYVESPTALLGAVKTRNISPVTIFRGD 240
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
LEL KMKIKVWVYKKT EEKFPTLKKYSDKAP TD+FATHEVKVDYEYKSVEDP+KVVP
Sbjct: 241 LELGSKMKIKVWVYKKTSEEKFPTLKKYSDKAPPTDRFATHEVKVDYEYKSVEDPNKVVP 300
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
PEQRIKGYRYGPQVVPISSAEW+AVKFKPEKSVKLLGFTDASNI+RHYYMKDVN+FI EP
Sbjct: 301 PEQRIKGYRYGPQVVPISSAEWDAVKFKPEKSVKLLGFTDASNIMRHYYMKDVNVFIPEP 360
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVL 402
GN+RA +AVSALARAMKEMNKVAI+RCVWRQGQ SVVVGVLTPN+SEK + PDSFYFNVL
Sbjct: 361 GNARAALAVSALARAMKEMNKVAILRCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNVL 420
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
PFAEDVREFQFPSFS FP SWQPNEQQQEAADNLVKMLDLAPS K E L P+ TPNP LE
Sbjct: 421 PFAEDVREFQFPSFSSFPASWQPNEQQQEAADNLVKMLDLAPSTKQEALLPDFTPNPVLE 480
>gi|296089149|emb|CBI38852.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/445 (76%), Positives = 392/445 (88%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
MH+ LP+VEKLCS L+QKKLIY KN EVG++LFGTE+T NELTKEVGGYEHV VL+ IKV
Sbjct: 1 MHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
VDG LV++L+ LP+GT AGDFLDAIVVG+DMLIKK+G T KGKK LCLIT ALCP+KDP
Sbjct: 61 VDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPY 120
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
GTKEDQ+ TIA QM A G++++ IV R LSG MR++ END LL +FS K++AKTL+
Sbjct: 121 EGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLY 180
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
V++ TSL GA +TR I+PVTIFRGDLELS KM+IKVWVYKKT EE+FPTLK+YSD+AP T
Sbjct: 181 VETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTAEERFPTLKQYSDQAPPT 240
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
DKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PISSAEWEAVKFKPEK VKL
Sbjct: 241 DKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPISSAEWEAVKFKPEKGVKL 300
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
LGFTDASN++RHYYM DVN+FIAEP N++A +AVSALARAMKEMNKVAI+RCVWRQGQ S
Sbjct: 301 LGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKEMNKVAILRCVWRQGQGS 360
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P SWQPNE+QQEAADNLV
Sbjct: 361 VVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLPASWQPNEEQQEAADNLV 420
Query: 438 KMLDLAPSGKGEILQPELTPNPALE 462
KMLDLAPSG E L P+LTPNP LE
Sbjct: 421 KMLDLAPSGSKETLLPDLTPNPVLE 445
>gi|449433125|ref|XP_004134348.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Cucumis
sativus]
Length = 691
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/462 (73%), Positives = 399/462 (86%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV PSMHS+LP+VEK+CS L++KKL+Y K EVG++LFGTE+T+NELT
Sbjct: 1 MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+EVGGY+HV VLQ +KVVDG LV LKH+P+GT +GDFLDAI+VG+DMLIKK+GET +GK
Sbjct: 61 EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCL+TDAL P+K+P GTKEDQV+TIA+QM G+RM ++VVR + + + EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFS+K++AK ++V+S TSL GA +TR I+PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLK+YSDKAP TDKFATHEVKVDYEYKS E+PSKVVPPE RIKGYRYGPQVVPIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEW+AVKFK EKSVKLLGFT+A +I+RHYYMKDVN+FIAEPGN R+ VAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK I DS +FNVLPFAEDVREFQFPSFS P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
QP+E+QQEAAD+ VKMLDLAP G+ EILQP+ TPNP LE
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLE 462
>gi|449525249|ref|XP_004169630.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Cucumis
sativus]
Length = 691
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/462 (73%), Positives = 398/462 (86%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV PSMHS+LP+VEK+CS L++KKL+Y K EVG++LF TE+T+NELT
Sbjct: 1 MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFRTEDTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+EVGGY+HV VLQ +KVVDG LV LKH+P+GT +GDFLDAI+VG+DMLIKK+GET +GK
Sbjct: 61 EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCL+TDAL P+K+P GTKEDQV+TIA+QM G+RM ++VVR + + + EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFS+K++AK ++V+S TSL GA +TR I+PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLK+YSDKAP TDKFATHEVKVDYEYKS E+PSKVVPPE RIKGYRYGPQVVPIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEW+AVKFK EKSVKLLGFT+A +I+RHYYMKDVN+FIAEPGN R+ VAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK I DS +FNVLPFAEDVREFQFPSFS P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
QP+E+QQEAAD+ VKMLDLAP G+ EILQP+ TPNP LE
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLE 462
>gi|357469575|ref|XP_003605072.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
gi|355506127|gb|AES87269.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
Length = 683
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/475 (69%), Positives = 404/475 (85%), Gaps = 5/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH VLP+VEK+CS L+QKKLIY K EVG++LFGTE+T+NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPVLPEVEKVCSMLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV V ++ KVVDG +V++L+ LP+GT GDFLDA++V +DMLIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVSKNSKVVDGDIVEALQQLPRGTTDGDFLDAVIVAMDMLIKKFGDTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP+KDP G+KE+QV+TIA+QM A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKDPYEGSKEEQVTTIAKQMTAHGMKMESIIVRGKLSQDANKEIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++ + L+V+ SL GA KTR+I+PVT+FRGDLELS K++IKV VYKKT
Sbjct: 181 DRLLNIFSKETQTRLLYVEDPISLFGALKTRNITPVTVFRGDLELSPKLRIKVMVYKKTQ 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKK+SDKAP TDKFATHEVKVDYEYKS DP KVVPP+QRIKGYRYGPQ++PIS
Sbjct: 241 EEKFPTLKKFSDKAPQTDKFATHEVKVDYEYKSSADPDKVVPPDQRIKGYRYGPQIIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEW+AVKFKPEK VKLLGFTD+SNILRH YMKDV +FIAEPGN++A +AVSAL+RAMKE
Sbjct: 301 SAEWDAVKFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +VV+GVLTPNVS++ N+PDSFYFN+LPFAEDVREFQFPSFS FP
Sbjct: 361 MNKVAILRCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDVREFQFPSFSSFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QPNEQQ E+A N +KMLDLAP GK E+L P+ TPNP L ++ +LD+
Sbjct: 421 ASCQPNEQQLESAANFIKMLDLAPDGKQEVLLPDFTPNPVL-----ARFYHYLDL 470
>gi|19401142|gb|AAL87543.1|AF293343_1 KAP-2 [Medicago truncatula]
Length = 683
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/475 (69%), Positives = 403/475 (84%), Gaps = 5/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH VLP+VEK+CS L+QKKLIY K EVG++LFGTE+T+NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPVLPEVEKVCSMLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV V ++ KVVDG +V++L+ LP+GT GDFLDA++V +DMLIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVSKNSKVVDGDIVEALQQLPRGTTDGDFLDAVIVAMDMLIKKFGDTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP+KDP G+KE+QV+TIA+QM A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKDPYEGSKEEQVTTIAKQMTAHGMKMESIIVRGKLSQDANKEIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++ + L+V+ SL GA KTR+I+PVT+FRGDLELS K++IKV VYKKT
Sbjct: 181 DRLLNIFSKETQTRLLYVEDPISLFGALKTRNITPVTVFRGDLELSPKLRIKVMVYKKTQ 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKK+SDKAP TDKFATHEVKVDYEYKS DP VVPP+QRIKGYRYGPQ++PIS
Sbjct: 241 EEKFPTLKKFSDKAPQTDKFATHEVKVDYEYKSSADPDIVVPPDQRIKGYRYGPQIIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEW+AVKFKPEK VKLLGFTD+SNILRH YMKDV +FIAEPGN++A +AVSAL+RAMKE
Sbjct: 301 SAEWDAVKFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +VV+GVLTPNVS++ N+PDSFYFN+LPFAEDVREFQFPSFS FP
Sbjct: 361 MNKVAILRCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDVREFQFPSFSSFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QPNEQQ E+A N +KMLDLAP GK E+L P+ TPNP L ++ +LD+
Sbjct: 421 ASCQPNEQQLESAANFIKMLDLAPDGKQEVLLPDFTPNPVL-----ARFYHYLDL 470
>gi|356512141|ref|XP_003524779.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Glycine
max]
Length = 687
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/462 (68%), Positives = 391/462 (84%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH L ++EK+CS L+ KKLIY K EVG++LFGTE+T NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPALSEIEKVCSMLVHKKLIYSKYDEVGIVLFGTEDTNNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV VL++IKVVDG +V++L+ LP+GT GDFLDA++VG+D+L+KK+G T KGK
Sbjct: 61 TEVGGYQHVVVLKNIKVVDGDIVEALQQLPRGTTDGDFLDAVIVGMDVLVKKFGVTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K +CLIT+A C +K+ D GTKE+QV+TIA+QM A G++M++I++R LS + + ++ EN
Sbjct: 121 KRVCLITNAQCQIKESDEGTKEEQVTTIAKQMTAHGIKMESIIMRGKLSQDANKGIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++S + L+V++ SL GA +TR+I+ VT+FRG LE+S K+ IKV VYKKT
Sbjct: 181 DRLLNIFSKETSTRLLYVENPISLFGALRTRNIALVTVFRGHLEISPKLSIKVMVYKKTT 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFP++KKYSDKAP DKFA HEVK+DYE+KS +DP KVVPP+QRIKGY YGPQ+VPIS
Sbjct: 241 EEKFPSMKKYSDKAPPNDKFAKHEVKIDYEHKSSKDPDKVVPPDQRIKGYPYGPQIVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKL+GFTD+SN+ RH+YMKDV +F+ EPGN+RA +AVSA+ARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLMGFTDSSNVFRHHYMKDVYVFLPEPGNTRAMIAVSAVARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +VV+GVLTPN+S+K NIPDSFY NVLPFAEDVREFQFPSF+ FP
Sbjct: 361 MNKVAIVRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFTNFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
SWQPN QQ EAA NL+K LDLAP G+ E+L P+ TPNP LE
Sbjct: 421 ASWQPNGQQLEAAANLIKTLDLAPHGQEEVLLPDFTPNPVLE 462
>gi|225453905|ref|XP_002273329.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
vinifera]
Length = 688
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/464 (70%), Positives = 395/464 (85%), Gaps = 3/464 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M R +EAL+LLLDVSP MH+ LP+VEKLC L+QKKLIY K VG++LFGT+ T+NELT
Sbjct: 1 MIRNQEALVLLLDVSPPMHNFLPEVEKLCFMLLQKKLIYNKKDLVGIVLFGTKVTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K+VGGY++V V QDIKVVDG LV++++ LP+GT AGDFLDAIVVG+DMLIKK+ T +GK
Sbjct: 61 KKVGGYKYVLVSQDIKVVDGDLVEAVRELPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGK 120
Query: 121 --KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
K LCLIT ALCP K P G KED++ TIA QM A G+R++ IV R LSG +MR++
Sbjct: 121 IKKRLCLITSALCPTKGPYKGAKEDEIGTIAEQMTAHGIRLECIVARGRLSGNMNMRIME 180
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 238
END LL +FSKK+ AKT++V+S TSL GA +TR+++PVTIFRGDLELS KM+IKVWVYKK
Sbjct: 181 ENDLLLKLFSKKTIAKTVYVESPTSLLGALRTRNVAPVTIFRGDLELSPKMEIKVWVYKK 240
Query: 239 TGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVP 298
+ EE P LK YSD+AP TDKFATHEV+V+ +YKSVEDP+KVVP QRI+GY YGPQVVP
Sbjct: 241 SAEE-LPVLKLYSDEAPPTDKFATHEVRVNLQYKSVEDPTKVVPLTQRIQGYSYGPQVVP 299
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
ISSAEWEAVKF+PEK VKLLGFTDASNI+RHYY KDVN+FIAEPGN++A +AVSALARAM
Sbjct: 300 ISSAEWEAVKFEPEKGVKLLGFTDASNIMRHYYKKDVNIFIAEPGNTKAILAVSALARAM 359
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
KEMNKVAI+RCVWR+ Q++V++G+LTPNVSEK ++PDSFYFNVLP+AEDV+EFQFPSFS
Sbjct: 360 KEMNKVAILRCVWRRKQRNVIIGILTPNVSEKDSVPDSFYFNVLPYAEDVQEFQFPSFSN 419
Query: 419 FPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
P+SWQPNE+QQEAAD+LV+ML LAP G+ E L P++TPNP LE
Sbjct: 420 LPLSWQPNEEQQEAADDLVQMLYLAPFGREESLLPDVTPNPVLE 463
>gi|19401144|gb|AAL87544.1|AF293344_1 KAP-2 [Phaseolus vulgaris]
Length = 686
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/463 (66%), Positives = 389/463 (84%), Gaps = 1/463 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M ++ALLLLLDV PSMH VLP++EK CS L+QKKL++ KN EVG++LFGTE+T+NELT
Sbjct: 1 MPPIKDALLLLLDVGPSMHYVLPEIEKACSLLVQKKLVFSKNDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV VL++ KVVDG +V++L+HLP+GT GDF+DA++VG+++LIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVLKNTKVVDGDIVEALQHLPRGTTDGDFVDAVIVGMNLLIKKFGQTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K +CLIT+A CP+K+ GTKE+QV+TIA+Q+ A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRICLITNAQCPIKESYEGTKEEQVTTIAKQLTAHGMKMESIIVRGKLSQDANKGIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++S + L++++ SL GA KTR+I+ VT+FRGDLE+S K+ IKV VYKKT
Sbjct: 181 DRLLNIFSKETSTRLLYLENPISLFGALKTRNITLVTVFRGDLEISPKLSIKVMVYKKTA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSK-VVPPEQRIKGYRYGPQVVPI 299
EEKFPTLKKY+DKAP DKFAT EVK+DYEYKS EDP K VVPP+QRI+GY YGPQ+VP+
Sbjct: 241 EEKFPTLKKYTDKAPPNDKFATREVKIDYEYKSSEDPDKVVVPPDQRIRGYPYGPQIVPL 300
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
S++ W+A KF PEK VKLLGFTD+SN+ RH+YMKDV +F+ +PGN+RA +AVS+LARAMK
Sbjct: 301 STSHWDAFKFLPEKGVKLLGFTDSSNVFRHHYMKDVYVFLPQPGNTRAMLAVSSLARAMK 360
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
EM+KVAI+RCVWRQGQ +VV+GVLTPN+S+K NIPDSFY NVLPFAEDVREFQF SFS F
Sbjct: 361 EMDKVAILRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFHSFSNF 420
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
P SW PN QQ EAA NLVK LDLAP G+ E+L P+ T NP LE
Sbjct: 421 PASWLPNGQQLEAAANLVKALDLAPDGQEEVLLPDFTANPVLE 463
>gi|18402015|ref|NP_564520.1| ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana]
gi|75172082|sp|Q9FQ09.1|KU80_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit
gi|12006422|gb|AAG44851.1|AF283758_1 Ku80-like protein [Arabidopsis thaliana]
gi|332194121|gb|AEE32242.1| ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana]
Length = 680
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/462 (66%), Positives = 380/462 (82%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV P+M SVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL
Sbjct: 1 MARNREGLVLVLDVGPAMRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGYE+V VL++I+VVD + +K LP+GT AGDFLDA++VG+DMLIK YG +KGK
Sbjct: 61 REIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K +CLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI EN
Sbjct: 121 KRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LL +FS + AKT+ VDS SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK
Sbjct: 181 DHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EE+ PTLK YSDKAP TDKFA HEVKVDY+YK + ++V+ PE+RIKG+RYGPQV+PIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+ E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MKE
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
NKVAIVRCVWR GQ +VVVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P
Sbjct: 361 TNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
SW+P+EQQQ ADNLVKMLDLAPS + E+L+P+LTPNP L+
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQ 462
>gi|297847048|ref|XP_002891405.1| hypothetical protein ARALYDRAFT_891612 [Arabidopsis lyrata subsp.
lyrata]
gi|297337247|gb|EFH67664.1| hypothetical protein ARALYDRAFT_891612 [Arabidopsis lyrata subsp.
lyrata]
Length = 680
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/462 (65%), Positives = 379/462 (82%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV P+MHSVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL
Sbjct: 1 MARNREGLVLVLDVGPAMHSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGYE+V VL++I+VVD + + +K LP+GT AGDFLDA++VG+DMLIK YG KGK
Sbjct: 61 REIGGYENVTVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAQKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI EN
Sbjct: 121 KRLCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LLN+FS + AKT+ V+S SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK
Sbjct: 181 DHLLNLFSSNAIAKTVNVESPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EE+ PTLK YSDKAP TDKFA HEVK+DY+YK + ++V+ PE+RIKG+RYG QV+PIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKIDYDYKVTAESTEVIAPEERIKGFRYGRQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+ E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MK+
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKQ 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
N VAIVRCVWR GQ + VVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P
Sbjct: 361 TNMVAIVRCVWRNGQGNAVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
SW+P+EQQQ ADNLVKMLDLAPS K E+L+P+LTPNP L+
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAKEEVLKPDLTPNPVLQ 462
>gi|61338429|gb|AAX43993.1| Ku80-like [Vigna radiata]
Length = 673
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 303/475 (63%), Positives = 390/475 (82%), Gaps = 5/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M ++ALLLLLDV PSMHSVLP++EK CS L+QKK+IY KN EVG++LFG E+T+NELT
Sbjct: 1 MPPIKDALLLLLDVGPSMHSVLPEIEKACSLLVQKKMIYSKNDEVGIVLFGAEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV VL+ IKVVDG ++++L+ LP+GT DFLDA++VG+DMLIKK+ +T KGK
Sbjct: 61 TEVGGYQHVVVLKKIKVVDGDILEALQQLPRGTTDADFLDAVIVGMDMLIKKFDQTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP+K+P GTKE+QV+ IA+Q+ A G++M++I+ R L + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKEPYEGTKEEQVTIIAKQLTAHGMKMESIIFRGKLGQDANREIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LLNIFSK++S + L++++ SL GA +TR+I+ VT FRGDLE+S K+ IKV VYKKT
Sbjct: 181 DHLLNIFSKETSTRLLYLENPISLFGALRTRNITLVTTFRGDLEISPKLSIKVMVYKKTA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP+ ++AT E+K+DYEYKS ED KV+ P+QRIKGY YGPQ+VPIS
Sbjct: 241 EEKFPTLKKYSDKAPTNAQYATRELKIDYEYKSSEDRDKVLSPDQRIKGYPYGPQIVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+EW+AVKF+PEK VKLLGFTD+SNI RH+YMKDV +F+ +PGN+ A +A+SALARAMKE
Sbjct: 301 RSEWDAVKFQPEKGVKLLGFTDSSNIFRHHYMKDVYVFLPQPGNTGAMLALSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAI+RCVWR+GQ +V +GVLTPN+S+K NIPDSFY NVLPFAEDVREFQFPSFS FP
Sbjct: 361 MDKVAILRCVWRKGQSNVSIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFSNFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
SW+PN QQ EAA NL+K LDLAP G+ E+L P+ T NP LE ++ FL++
Sbjct: 421 ASWKPNGQQLEAAANLIKTLDLAPHGQAEVLLPDFTSNPVLE-----RFYRFLEL 470
>gi|12323098|gb|AAG51535.1|AC051631_15 hypothetical protein; 39910-36975 [Arabidopsis thaliana]
Length = 663
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/445 (66%), Positives = 366/445 (82%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
M SVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL +E+GGYE+V VL++I+V
Sbjct: 1 MRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELAREIGGYENVTVLRNIRV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
VD + +K LP+GT AGDFLDA++VG+DMLIK YG +KGKK +CLIT+A CP KDP
Sbjct: 61 VDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGKKRMCLITNAACPTKDPF 120
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI END+LL +FS + AKT+
Sbjct: 121 EGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEENDHLLTLFSSNAIAKTVN 180
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
VDS SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK EE+ PTLK YSDKAP T
Sbjct: 181 VDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVAEERLPTLKMYSDKAPPT 240
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
DKFA HEVKVDY+YK + ++V+ PE+RIKG+RYGPQV+PIS + E +KFK +K +KL
Sbjct: 241 DKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPISPDQIETLKFKTDKGMKL 300
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
LGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MKE NKVAIVRCVWR GQ +
Sbjct: 301 LGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKETNKVAIVRCVWRNGQGN 360
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VVVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P SW+P+EQQQ ADNLV
Sbjct: 361 VVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLPSSWKPDEQQQAVADNLV 420
Query: 438 KMLDLAPSGKGEILQPELTPNPALE 462
KMLDLAPS + E+L+P+LTPNP L+
Sbjct: 421 KMLDLAPSAEEEVLKPDLTPNPVLQ 445
>gi|75226365|sp|Q75IP6.1|KU80_ORYSJ RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit
gi|41393254|gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing
isoforms [Oryza sativa Japonica Group]
gi|108712190|gb|ABF99985.1| KAP-2, putative, expressed [Oryza sativa Japonica Group]
Length = 688
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 314/475 (66%), Positives = 378/475 (79%), Gaps = 8/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT GDFLDAIVVG+DMLI+K+G KGK
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFG-NIKGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 120 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE+S KIKVWVYKKT
Sbjct: 178 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGFTD S+I RHY+MKDV F+ EPGN++A AVSALARAM E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSE 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQF SFS P
Sbjct: 358 MNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE ++ +LD+
Sbjct: 418 SSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLE-----RFYRYLDL 467
>gi|308052434|gb|ADO00729.1| Ku80 [Triticum aestivum]
Length = 706
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 308/472 (65%), Positives = 369/472 (78%), Gaps = 5/472 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH LP+VE +C+ L++KKL++ ++ EVGV+LFG +ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALPEVENVCTTLVRKKLVFHRSDEVGVVLFGAKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFRES--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE+S KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVSSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P V+PP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVIPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S+I R Y+MKDVN F+ EPGN++A VAVSALARAM+E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSIPRSYFMKDVNSFVPEPGNTKAMVAVSALARAMQE 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAED+R+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDIRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGF 472
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE Y G
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLE--RFYSYLGL 467
>gi|357116037|ref|XP_003559791.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform 1
[Brachypodium distachyon]
Length = 689
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 314/475 (66%), Positives = 377/475 (79%), Gaps = 8/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L +VE +CS L++KKL+Y ++ EVG++LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHGALQEVENVCSTLLRKKLVYNRSDEVGIVLFGTKETCNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V DIKVV+ +L++LP+GT GDFLDAIVVG+DMLIK++G T KGK
Sbjct: 61 KEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
LCLITD+ PL+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 120 HRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRES--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ TSL GA KTR + PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 178 DQLLYHFRDRSVAKVVQVDTPTSLLGALKTRIVLPVTIFRGDLEVSSNLKIKVWVYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSD+AP +DKFA+HEVKVD+EYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDQAPPSDKFASHEVKVDFEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S+I RHY+MKDVN F+ EPGN +ATVAVSA+ARAM+E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSIPRHYFMKDVNSFVPEPGNKKATVAVSAIARAMQE 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +V GVLTPN+S N+PDSF+FN+LPF+ED+REFQF SFS P
Sbjct: 358 MNKVAILRCVWRQGQGNVAFGVLTPNISSVNNVPDSFFFNILPFSEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAAD+LVKMLDLAP G+ EIL+P+ TPNP LE ++ FLD+
Sbjct: 418 SSSQPTEEQQEAADSLVKMLDLAPPGREEILRPDFTPNPMLE-----RFYSFLDL 467
>gi|296089148|emb|CBI38851.3| unnamed protein product [Vitis vinifera]
Length = 690
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/436 (69%), Positives = 368/436 (84%), Gaps = 6/436 (1%)
Query: 29 CSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH 88
C R + LIY K VG++LFGT+ T+NELTK+VGGY++V V QDIKVVDG LV++++
Sbjct: 34 CRR---RHLIYNKKDLVGIVLFGTKVTKNELTKKVGGYKYVLVSQDIKVVDGDLVEAVRE 90
Query: 89 LPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK--KHLCLITDALCPLKDPDVGTKEDQVS 146
LP+GT AGDFLDAIVVG+DMLIKK+ T +GK K LCLIT ALCP K P G KED++
Sbjct: 91 LPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGKIKKRLCLITSALCPTKGPYKGAKEDEIG 150
Query: 147 TIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG 206
TIA QM A G+R++ IV R LSG +MR++ END LL +FSKK+ AKT++V+S TSL G
Sbjct: 151 TIAEQMTAHGIRLECIVARGRLSGNMNMRIMEENDLLLKLFSKKTIAKTVYVESPTSLLG 210
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 266
A +TR+++PVTIFRGDLELS KM+IKVWVYKK+ EE P LK YSD+AP TDKFATHEV+
Sbjct: 211 ALRTRNVAPVTIFRGDLELSPKMEIKVWVYKKSAEE-LPVLKLYSDEAPPTDKFATHEVR 269
Query: 267 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
V+ +YKSVEDP+KVVP QRI+GY YGPQVVPISSAEWEAVKF+PEK VKLLGFTDASNI
Sbjct: 270 VNLQYKSVEDPTKVVPLTQRIQGYSYGPQVVPISSAEWEAVKFEPEKGVKLLGFTDASNI 329
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
+RHYY KDVN+FIAEPGN++A +AVSALARAMKEMNKVAI+RCVWR+ Q++V++G+LTPN
Sbjct: 330 MRHYYKKDVNIFIAEPGNTKAILAVSALARAMKEMNKVAILRCVWRRKQRNVIIGILTPN 389
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
VSEK ++PDSFYFNVLP+AEDV+EFQFPSFS P+SWQPNE+QQEAAD+LV+ML LAP G
Sbjct: 390 VSEKDSVPDSFYFNVLPYAEDVQEFQFPSFSNLPLSWQPNEEQQEAADDLVQMLYLAPFG 449
Query: 447 KGEILQPELTPNPALE 462
+ E L P++TPNP LE
Sbjct: 450 REESLLPDVTPNPVLE 465
>gi|347357753|gb|AEO86624.1| Ku80 [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 306/475 (64%), Positives = 372/475 (78%), Gaps = 8/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM +M IV R + G H VI EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKRRATKMGCIVFREA--GVQHNSVICEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE ++ +LD+
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLE-----RFYSYLDL 467
>gi|326500760|dbj|BAJ95046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/475 (64%), Positives = 373/475 (78%), Gaps = 8/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R + G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFREA--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE ++ +LD+
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLE-----RFYSYLDL 467
>gi|326524151|dbj|BAJ97086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 478
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/463 (65%), Positives = 368/463 (79%), Gaps = 3/463 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R + G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFREA--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEV 463
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LEV
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLEV 460
>gi|8778524|gb|AAF79532.1|AC023673_20 F21D18.26 [Arabidopsis thaliana]
Length = 707
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/481 (61%), Positives = 368/481 (76%), Gaps = 33/481 (6%)
Query: 18 MHSVLPDVEKLCSRLIQKK--------------------------LIYGKNHEVGVILFG 51
M SVLPDVEK CS L+QKK LIY K EVG+++FG
Sbjct: 1 MRSVLPDVEKACSMLLQKKVYDLFLLKLLFMNFGSFLIGFGLLLQLIYNKYDEVGIVVFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD-----FLDAIVVGV 106
TEET NEL +E+GGYE+V VL++I+VVD + +K LP+GT AGD LDA++VG+
Sbjct: 61 TEETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDCILLAILDALIVGM 120
Query: 107 DMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
DMLIK YG +KGKK +CLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R+
Sbjct: 121 DMLIKMYGNAHKGKKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRS 180
Query: 167 SLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELS 226
+LSG+ H RVI END+LL +FS + AKT+ VDS SL G+ KTR ++PVT+FRGDLE++
Sbjct: 181 NLSGDAHERVIEENDHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEIN 240
Query: 227 EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQR 286
MKIKVWVYKK EE+ PTLK YSDKAP TDKFA HEVKVDY+YK + ++V+ PE+R
Sbjct: 241 PTMKIKVWVYKKVAEERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEER 300
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
IKG+RYGPQV+PIS + E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P +
Sbjct: 301 IKGFRYGPQVIPISPDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEK 360
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 406
+ +AVSA+AR MKE NKVAIVRCVWR GQ +VVVGVLTPNVSE+ + PDSFYFNVLPFAE
Sbjct: 361 SVLAVSAIAREMKETNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAE 420
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNI 466
DVREF FPSF+K P SW+P+EQQQ ADNLVKMLDLAPS + E+L+P+LTPNP L+V I
Sbjct: 421 DVREFPFPSFNKLPSSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQV--I 478
Query: 467 C 467
C
Sbjct: 479 C 479
>gi|414874016|tpg|DAA52573.1| TPA: KAP-2 [Zea mays]
Length = 681
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 306/475 (64%), Positives = 374/475 (78%), Gaps = 9/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL +V+ +C L+ KKL+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K++GGY+HV V+ DIKVVD Q+L++LP G+ GDFLD+IVVG+DM+I+K+G T KGK
Sbjct: 61 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 120 RRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREP--GVHHNDVMEEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 178 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 238 EEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 298 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+REFQF SFS P
Sbjct: 358 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LE ++ +LD+
Sbjct: 418 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILE-----RFYSYLDL 466
>gi|226495197|ref|NP_001147945.1| LOC100281554 [Zea mays]
gi|195614740|gb|ACG29200.1| KAP-2 [Zea mays]
Length = 681
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 305/475 (64%), Positives = 374/475 (78%), Gaps = 9/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL +V+ +C L+ KKL+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K++GGY+HV V+ DIKVVD Q+L++LP G+ GDFLD+IVVG+DM+I+K+G T KGK
Sbjct: 61 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 120 RRLCLITSAQELLRDPPEGTKEDQVDTIADMLKKHNIKMECIIFREP--GVHHNDVMEEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 178 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 238 EEKFPTLKKYSDKAPPSDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 298 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +V +GVLTPN+S I DSFYFNVLPFAED+REFQF SFS P
Sbjct: 358 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNTIQDSFYFNVLPFAEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LE ++ +LD+
Sbjct: 418 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILE-----RFYSYLDL 466
>gi|357116039|ref|XP_003559792.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform 2
[Brachypodium distachyon]
Length = 677
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 307/475 (64%), Positives = 368/475 (77%), Gaps = 20/475 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++L+Y ++ EVG++LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHGAL------------QELVYNRSDEVGIVLFGTKETCNDLA 48
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V DIKVV+ +L++LP+GT GDFLDAIVVG+DMLIK++G T KGK
Sbjct: 49 KEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KGK 107
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
LCLITD+ PL+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 108 HRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRES--GVQHNSVMDEN 165
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ TSL GA KTR + PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 166 DQLLYHFRDRSVAKVVQVDTPTSLLGALKTRIVLPVTIFRGDLEVSSNLKIKVWVYKKTS 225
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSD+AP +DKFA+HEVKVD+EYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 226 EEKFPTLKKYSDQAPPSDKFASHEVKVDFEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 285
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S+I RHY+MKDVN F+ EPGN +ATVAVSA+ARAM+E
Sbjct: 286 SAEWEAVKFKPEKGVKLLGFADRSSIPRHYFMKDVNSFVPEPGNKKATVAVSAIARAMQE 345
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +V GVLTPN+S N+PDSF+FN+LPF+ED+REFQF SFS P
Sbjct: 346 MNKVAILRCVWRQGQGNVAFGVLTPNISSVNNVPDSFFFNILPFSEDIREFQFRSFSSLP 405
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAAD+LVKMLDLAP G+ EIL+P+ TPNP LE ++ FLD+
Sbjct: 406 SSSQPTEEQQEAADSLVKMLDLAPPGREEILRPDFTPNPMLE-----RFYSFLDL 455
>gi|223943233|gb|ACN25700.1| unknown [Zea mays]
gi|414874015|tpg|DAA52572.1| TPA: hypothetical protein ZEAMMB73_970034 [Zea mays]
Length = 669
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 301/475 (63%), Positives = 366/475 (77%), Gaps = 21/475 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL + L+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLE------------LVYNRSDEVGIVLFGTKGTCNELA 48
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K++GGY+HV V+ DIKVVD Q+L++LP G+ GDFLD+IVVG+DM+I+K+G T KGK
Sbjct: 49 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 107
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 108 RRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREP--GVHHNDVMEEN 165
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 166 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 225
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 226 EEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 285
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 286 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 345
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+REFQF SFS P
Sbjct: 346 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLP 405
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LE ++ +LD+
Sbjct: 406 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILE-----RFYSYLDL 454
>gi|365768469|gb|AEW90637.1| KU80-like protein [Pinus sylvestris]
Length = 710
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/475 (60%), Positives = 360/475 (75%), Gaps = 5/475 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E+L+LLLD+SPSMH+ L VE+ S L+++K+ + K+ EVG++LFG EE +N+L
Sbjct: 1 MARNKESLVLLLDISPSMHNHLHYVERAMSTLVRRKVYFSKSDEVGLVLFGAEEPDNDLQ 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KEVGGYE+V V + IKVVD ++++L LP+G GDFLDAIVVG+D+LIKK G+ KG
Sbjct: 61 KEVGGYENVVVFRPIKVVDEDILEALSRLPRGMAPGDFLDAIVVGMDLLIKKLGKGSKGN 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT A +K+PD GTKEDQV IA QM G+++ +V R + G+ + EN
Sbjct: 121 KRLCLITGAQSFIKEPDEGTKEDQVDIIANQMKEHGMKLDVVVFRQRMPGQTKSELFSEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
+LLN FS+++ A+ + V+S TSL GA K R+ISP TIFRGDLEL+ MKIKVWVYKKT
Sbjct: 181 LSLLNRFSRRTEAEVIVVESPTSLLGAVKVRNISPFTIFRGDLELTPIMKIKVWVYKKTY 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
+E+ PTLKKYSDKAP D +AT EVK+D EYKS E+P K +PPEQRIKG+ YGPQVVPIS
Sbjct: 241 QERIPTLKKYSDKAPPNDPYATREVKMDIEYKSREEPDKTIPPEQRIKGFNYGPQVVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
AE E +KFKPEK VKLLGFTDAS+I RH YMKD ++ IAEPGN++A +AVSA+ARAM+E
Sbjct: 301 MAEQETLKFKPEKGVKLLGFTDASSIPRHSYMKDTSILIAEPGNTKAILAVSAVARAMEE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
KVAI+RCVWR+ Q +V++GVLTPN+S K N DSFYFN++PF ED+REF F SF FP
Sbjct: 361 TKKVAILRCVWRERQANVILGVLTPNISNKSNAADSFYFNIIPFVEDIREFPFASFDSFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
S QPN QQEAADN V+MLDLAP G+ E L PELT NP LE ++ FLD
Sbjct: 421 ASQQPNIVQQEAADNFVQMLDLAPPGREEALLPELTLNPILE-----RFYSFLDT 470
>gi|242037345|ref|XP_002466067.1| hypothetical protein SORBIDRAFT_01g000620 [Sorghum bicolor]
gi|241919921|gb|EER93065.1| hypothetical protein SORBIDRAFT_01g000620 [Sorghum bicolor]
Length = 670
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 291/458 (63%), Positives = 359/458 (78%), Gaps = 9/458 (1%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
MH VL +V+ +CS L+ KKL+Y ++ EVG++LFGT+ T NEL KE+GGY+HV V +DIKV
Sbjct: 1 MHGVLQEVKNICSTLVHKKLVYNRSDEVGIVLFGTKGTCNELAKELGGYKHVTVTRDIKV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
VD Q+L++LP G+ GDFLD+IVVG+DM+++K+G T KGK+ LCLIT A L+DP
Sbjct: 61 VDEGAAQALQNLPLGSAPGDFLDSIVVGLDMVMRKFGNT-KGKRRLCLITSAQDLLRDPP 119
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
GTKE+QV TIA + ++++ I+ R G V+ END LL F +S AK +
Sbjct: 120 EGTKEEQVDTIADMLKKHSIKLECIIFREP--GVLRNAVMEENDRLLYQFRNRSVAKVVQ 177
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
VDS TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT EEKFPTLKKYSDKAP +
Sbjct: 178 VDSPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTAEEKFPTLKKYSDKAPPS 237
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
DK A+HEVKVDYEYKSV +P K+VPP+QRIKGY YGPQV+P+S+AEWEAVKFKPEK VKL
Sbjct: 238 DKLASHEVKVDYEYKSVVEPDKIVPPDQRIKGYLYGPQVIPVSNAEWEAVKFKPEKGVKL 297
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
LGFTD SN+ RH++MKDV LFI EPGN +AT+AVSA+ARAM +MNK AIVRCVWRQGQ +
Sbjct: 298 LGFTDRSNVPRHHFMKDVCLFIPEPGNIKATLAVSAIARAMHQMNKAAIVRCVWRQGQGN 357
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
V +GVLTPN+S N+ DSFYFNVLPFAED+REFQF SFS P S QP E+QQEAADNLV
Sbjct: 358 VALGVLTPNISAVDNVQDSFYFNVLPFAEDIREFQFRSFSSLPSSSQPTEEQQEAADNLV 417
Query: 438 KMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFLDV 475
KMLDLAP G+ E+L+PE TPNP LE ++ +LD+
Sbjct: 418 KMLDLAPPGR-EVLKPEFTPNPMLE-----RFYSYLDL 449
>gi|222626200|gb|EEE60332.1| hypothetical protein OsJ_13430 [Oryza sativa Japonica Group]
Length = 643
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/483 (59%), Positives = 347/483 (71%), Gaps = 50/483 (10%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT G K
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPG-----------------------K 97
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 98 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 155
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE VWVYKKT
Sbjct: 156 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLE--------VWVYKKTS 207
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 208 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 267
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASN--------ILRHYYMKDVNLFIAEPGNSRATVAVS 352
SAEWEAVKFKPEK ++ D SN RHY+MKDV F+ EPGN++A AVS
Sbjct: 268 SAEWEAVKFKPEKVLR----PDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVS 323
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
ALARAM EMNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQ
Sbjct: 324 ALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQ 383
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGF 472
F SFS P S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE ++ +
Sbjct: 384 FRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLE-----RFYRY 438
Query: 473 LDV 475
LD+
Sbjct: 439 LDL 441
>gi|218194141|gb|EEC76568.1| hypothetical protein OsI_14396 [Oryza sativa Indica Group]
Length = 643
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/483 (59%), Positives = 347/483 (71%), Gaps = 50/483 (10%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT G K
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPG-----------------------K 97
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 98 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 155
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE VWVYKKT
Sbjct: 156 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLE--------VWVYKKTS 207
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 208 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 267
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASN--------ILRHYYMKDVNLFIAEPGNSRATVAVS 352
SAEWEAVKFKPEK ++ D SN RHY+MKDV F+ EPGN++A AVS
Sbjct: 268 SAEWEAVKFKPEKVLR----PDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVS 323
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
ALARAM EMNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQ
Sbjct: 324 ALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQ 383
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGF 472
F SFS P S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE ++ +
Sbjct: 384 FRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLE-----RFYRY 438
Query: 473 LDV 475
LD+
Sbjct: 439 LDL 441
>gi|168035223|ref|XP_001770110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678636|gb|EDQ65092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 708
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/455 (53%), Positives = 323/455 (70%), Gaps = 1/455 (0%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCSRLIQKKLIY-GKNHEVGVILFGTEETENELTKEVGGYE 67
+LLLDV PSMH L DV K + LI +K IY GKN EVGV+ FGT ET+NEL KE+ GY
Sbjct: 1 MLLLDVGPSMHPYLADVSKCMTTLIHRKAIYQGKNDEVGVVYFGTTETDNELNKEMEGYH 60
Query: 68 HVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLIT 127
++ V++ I VV L L+++P G + DFLD IVVG DML+KK GE KG K LCL+T
Sbjct: 61 NIVVVEPIAVVSQDLAHRLENIPCGFGSSDFLDVIVVGCDMLMKKLGENKKGNKRLCLVT 120
Query: 128 DALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF 187
DA P+++P GT EDQV IA +M G+++ +VVR + + +ND LL++F
Sbjct: 121 DAASPVREPSEGTVEDQVRNIAERMGEQGIKLDVVVVRVGQNFLINSTGQHQNDVLLDLF 180
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
+ A+ + TS+ G + R +SP T++RGD EL+ ++IKVWVYKKT +EK PTL
Sbjct: 181 KLHTQAEIGIARTATSMLGIIRPRAVSPTTLYRGDFELTPDLRIKVWVYKKTSQEKLPTL 240
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KKYS++AP++D AT EVK+D EYKS ++P VPPEQR K Y+YG +PISS+ +++
Sbjct: 241 KKYSNEAPASDSHATREVKIDTEYKSSDNPDVSVPPEQRTKAYKYGKNFIPISSSMEDSL 300
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
KFKPEK VKL GF S+I RHY++K+ ++F+ EPG+ ++ VAVSALARAMKE + A+V
Sbjct: 301 KFKPEKGVKLKGFVKRSDIPRHYFLKESSIFLPEPGHQKSIVAVSALARAMKEHDYAAVV 360
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
RCVWRQGQ +VV+G+L P VS + N+ D FYFNV+PF +D+REF+F SFS P S QP+
Sbjct: 361 RCVWRQGQTNVVMGILLPFVSAQENVADGFYFNVIPFLDDMREFRFTSFSSMPESLQPSC 420
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+QQEAA NLV+MLDL+PS E+LQPE T NP L+
Sbjct: 421 EQQEAAYNLVRMLDLSPSEDEELLQPEQTINPVLQ 455
>gi|302755234|ref|XP_002961041.1| hypothetical protein SELMODRAFT_74928 [Selaginella moellendorffii]
gi|300171980|gb|EFJ38580.1| hypothetical protein SELMODRAFT_74928 [Selaginella moellendorffii]
Length = 701
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 323/460 (70%), Gaps = 6/460 (1%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+E+L+ +LDVSPSMH L V K + ++++KL KN EVG++LFG EET+N+L +EVG
Sbjct: 1 QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG 60
Query: 65 -GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
YE + V + I +VDG LV L+ LP+G AGD++DAIVV DM+ KKYG+ KG K +
Sbjct: 61 EAYEGI-VSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRI 119
Query: 124 CLITDALCPLKDPDVG-TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
CLITDA P+K+P G + +QV IA +M G+R ++R + E E+
Sbjct: 120 CLITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVRFDAAILRMN---EEKRESGSESTE 176
Query: 183 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 242
+L + ++ + V+S L GA K R ++P T++RGD+E++ +IKVWVYKK +E
Sbjct: 177 ILENLASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQE 236
Query: 243 KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 302
+ P+LK YSDKAP +D ATH VK+D +YKS +DP+ +P QR KGY YG Q++P++
Sbjct: 237 RVPSLKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPD 296
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
++KF +K VKLLGFT+A+NI RHYYMK+ NLF+ EPGN +A++A+SALARA+K+ N
Sbjct: 297 MELSLKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAMSALARALKQTN 356
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
VA+VRCVWRQGQ++VV+GVLTPN+S + I DSFYFN++PFAED+REF F SF P S
Sbjct: 357 MVALVRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPAS 416
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
P++QQ+EA D LV+MLDL+PS E LQPE T NP L+
Sbjct: 417 QLPSKQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQ 456
>gi|302767102|ref|XP_002966971.1| hypothetical protein SELMODRAFT_86463 [Selaginella moellendorffii]
gi|300164962|gb|EFJ31570.1| hypothetical protein SELMODRAFT_86463 [Selaginella moellendorffii]
Length = 701
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/460 (50%), Positives = 323/460 (70%), Gaps = 6/460 (1%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+E+L+ +LDVSPSMH L V K + ++++KL KN EVG++LFG EET+N+L +EVG
Sbjct: 1 QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG 60
Query: 65 -GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
YE + V + I +VDG LV L+ LP+G AGD++DAIVV DM+ KKYG+ KG K +
Sbjct: 61 EAYEGI-VSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRI 119
Query: 124 CLITDALCPLKDPDVG-TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
CLITDA P+K+P G + +QV IA +M G++ ++R + E E+
Sbjct: 120 CLITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVKFDAAILRMN---EEKRESGSESTE 176
Query: 183 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 242
+L + ++ + V+S L GA K R ++P T++RGD+E++ +IKVWVYKK +E
Sbjct: 177 ILENLASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQE 236
Query: 243 KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 302
+ P+LK YSDKAP +D ATH VK+D +YKS +DP+ +P QR KGY YG Q++P++
Sbjct: 237 RVPSLKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPD 296
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
++KF +K VKLLGFT+A+NI RHYYMK+ NLF+ EPGN +A++A+SALARA+K+ N
Sbjct: 297 MELSLKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAISALARALKQTN 356
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
VA+VRCVWRQGQ++VV+GVLTPN+S + I DSFYFN++PFAED+REF F SF P S
Sbjct: 357 MVALVRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPAS 416
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
P++QQ+EA D LV+MLDL+PS E LQPE T NP L+
Sbjct: 417 QLPSKQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQ 456
>gi|41393255|gb|AAS01978.1| putative H-box binding protein, KAP2, with alternative splicing
isoforms [Oryza sativa Japonica Group]
Length = 325
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 260/328 (79%), Gaps = 3/328 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT GDFLDAIVVG+DMLI+K+G KGK
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFG-NIKGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 120 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE+S KIKVWVYKKT
Sbjct: 178 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILR 328
SAEWEAVKFKPEK VKLLGFTD S+I R
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFTDRSSISR 325
>gi|147828533|emb|CAN68627.1| hypothetical protein VITISV_004463 [Vitis vinifera]
Length = 812
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/230 (83%), Positives = 212/230 (92%)
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 292
VWVYKKT E +FPTLK+YSD+AP TDKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRY
Sbjct: 348 VWVYKKTAEXRFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRY 407
Query: 293 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVS 352
GPQV+PISSAEWEAVKFKPEK VKLLGFTDASN++RHYYM DVN+FIAEPGN++A + VS
Sbjct: 408 GPQVIPISSAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPGNTKAMLTVS 467
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
ALARAMKEMNKVAI+RCVWRQGQ SVV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQ
Sbjct: 468 ALARAMKEMNKVAILRCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQ 527
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
FPSFS P SWQPNE+QQEAADNLVKMLDLAPSG E L P+LTPNP LE
Sbjct: 528 FPSFSNLPASWQPNEEQQEAADNLVKMLDLAPSGSRETLLPDLTPNPVLE 577
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 161/198 (81%), Gaps = 2/198 (1%)
Query: 36 KLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCA 95
KLIY KN EVG++LFGTE+T NELTKEVGGYEHV VL+ IKVVDG LV++L+ LP+GT A
Sbjct: 13 KLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVA 72
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
LDAIVVG+DMLIKK+G T KGKK LCLIT ALCP+KDP GTKEDQ+ TIA QM A
Sbjct: 73 --VLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAH 130
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G++++ IV R LSG MR++ END LL +FS K++AKTL+V++ TSL GA +TR I+P
Sbjct: 131 GMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLYVETPTSLLGALRTRSIAP 190
Query: 216 VTIFRGDLELSEKMKIKV 233
VTIFRGDLELS KM+IK+
Sbjct: 191 VTIFRGDLELSPKMRIKL 208
>gi|414874017|tpg|DAA52574.1| TPA: hypothetical protein ZEAMMB73_970034 [Zea mays]
Length = 463
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/245 (73%), Positives = 208/245 (84%), Gaps = 6/245 (2%)
Query: 231 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY 290
+KVWVYKKT EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY
Sbjct: 10 LKVWVYKKTAEEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGY 69
Query: 291 RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 350
YGPQV+P+S+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++A
Sbjct: 70 LYGPQVIPVSNAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLA 129
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 410
VSA+ARAM +MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+RE
Sbjct: 130 VSAIARAMHQMNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIRE 189
Query: 411 FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYF 470
FQF SFS P S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LE ++
Sbjct: 190 FQFRSFSSLPSSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILE-----RFY 243
Query: 471 GFLDV 475
+LD+
Sbjct: 244 SYLDL 248
>gi|374351676|gb|AEZ36039.1| KU80, partial [Nicotiana benthamiana]
Length = 181
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/181 (80%), Positives = 167/181 (92%)
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
S KSS+K + V++ TSL GA +TR+ISPVTI+RGD E+S ++KIK WVYKKT EEKFPTL
Sbjct: 1 SNKSSSKVVHVETPTSLLGALRTRNISPVTIYRGDFEVSSQLKIKGWVYKKTSEEKFPTL 60
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KKYS+KAP TDKFATHE+KVDYEYKS+EDP+KVVPPEQRIKG+RYGPQVVPISSAE EAV
Sbjct: 61 KKYSEKAPPTDKFATHEIKVDYEYKSIEDPNKVVPPEQRIKGFRYGPQVVPISSAELEAV 120
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
KFKPEKSVKLLGFTDASNI+RHYY+KDVN+FIAEPGN +A +A+S+LARAMKEMNKVAIV
Sbjct: 121 KFKPEKSVKLLGFTDASNIMRHYYLKDVNIFIAEPGNKKAILALSSLARAMKEMNKVAIV 180
Query: 368 R 368
R
Sbjct: 181 R 181
>gi|170181041|gb|ACB11497.1| KU80-like protein [Pinus sylvestris]
Length = 224
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 163/224 (72%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E+L+LLLD+SPSMH+ L VE+ S L+++K+ + K+ EVG++LFG EE +N+L
Sbjct: 1 MARNKESLVLLLDISPSMHNHLHYVERAMSTLVRRKVYFSKSDEVGLVLFGAEEPDNDLQ 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KEVGGYE+V V + IKVVD ++++L LP+G GDFLDAIVVG+D+LIKK G+ KG
Sbjct: 61 KEVGGYENVVVFRPIKVVDEDILEALSRLPRGMAPGDFLDAIVVGMDLLIKKLGKGSKGN 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT A +K+PD GTKEDQV IA QM G+++ +V R + G+ + EN
Sbjct: 121 KRLCLITGAQSFIKEPDEGTKEDQVDIIANQMKEHGMKLDVVVFRQRMPGQTKSELFSEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLE 224
+LLN FS+++ A+ + V+S TSL GA K R+ISP TIFRGDLE
Sbjct: 181 LSLLNRFSRRTEAEVIVVESPTSLLGAVKVRNISPFTIFRGDLE 224
>gi|328875870|gb|EGG24234.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 756
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 251/506 (49%), Gaps = 52/506 (10%)
Query: 4 TREALLLLLDVSPSMH--------------------------------SVLPDVEKLCSR 31
T+EAL+++LD+ MH S + + K +
Sbjct: 6 TKEALVVILDIGLGMHKHHRSVGGGGISSSSSSLSSQSQHLLQSANNTSPIDEALKAATL 65
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
L Q+KLIYGK E+G++L GT+ET N L K+ GY+H+ +I+ ++ L+ +
Sbjct: 66 LFQQKLIYGKKDELGLVLIGTKETNNSLQKD--GYQHITTACNIEEPKVETLRFLESIQP 123
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
G GD +D+++V +DMLI K E K +K + L+T+A P+ D+ + Q +
Sbjct: 124 GESRGDVIDSLIVAMDMLIHK-TEKKKFQKRIFLVTNASDPINKDDLSILQQQFKNTDVK 182
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+ G+ + L + + +N+ L F + + + V + +++
Sbjct: 183 LNVVGVDFTD---EEDLENKIQLTEKEKNEVFLRRFVQSVNGILVPVKQALEIMSFFRSQ 239
Query: 212 DISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 271
+ T FRG LE+S + I VW Y +T + PTLKK S A D A+ EVK + +
Sbjct: 240 SVLSRTGFRGVLEISTEFGIPVWGYLRTKIQTLPTLKKVSTVAQQADNPASLEVKQEKLH 299
Query: 272 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
S+ DP K + +KGY+YG ++P S + EA+K K +K LGF AS+I H+
Sbjct: 300 YSITDPDKEILDHDLLKGYKYGKSIIPYSKIDIEALKLSASKCLKTLGFAPASHIPLHHL 359
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M + +A PG+ A +A+S + A+ E ++V IVR V R S +G L P++ K
Sbjct: 360 MGQTEVLVAPPGDQEAALALSGIIHALAETDQVIIVRFVKR-SNCSPYLGYLYPHI--KA 416
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFS-KFPV---SWQPNEQQQEAADNLVKMLDLAPSGK 447
N + YFN LPF +D+R +QFP S K P +QP Q AA +L++ +DL + +
Sbjct: 417 NY-ECLYFNPLPFIDDIRHYQFPPISPKNPQCKKQYQPTADQLNAAHSLIESMDLMTADE 475
Query: 448 GE------ILQPELTPNPALEVLNIC 467
+ L+P+ T NP+L+ C
Sbjct: 476 DDEGQPMPSLRPKYTYNPSLQHFFQC 501
>gi|290979382|ref|XP_002672413.1| Ku70/Ku80 beta-barrel domain-containing protein [Naegleria gruberi]
gi|284085989|gb|EFC39669.1| Ku70/Ku80 beta-barrel domain-containing protein [Naegleria gruberi]
Length = 773
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 248/496 (50%), Gaps = 55/496 (11%)
Query: 5 REALLLLLDVSPSMHSVLPD----VEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
+EAL+++ DV S+ + D ++ + LI+ K+ Y EVG +L GT++T+N L
Sbjct: 12 KEALVIIFDVGKSLGTRSRDEFEKAKRAITLLIKMKMRYSPKDEVGFVLVGTKKTKNHLN 71
Query: 61 KEVGG-YEHVKVLQDI--------KVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIK 111
E G YE++ + Q I K+VD + ++ P+G D DA++V DM+
Sbjct: 72 DEYEGEYENIYIEQAIDTVSLDLFKIVDSINIDTIGMSPEG----DLFDAVIVATDMIKD 127
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE 171
+ G+ K K + +++DA G E V R+ + G+R +++ V
Sbjct: 128 RCGKR-KYAKRIVIVSDA---------GGTEISVDNDTRENIYQGMRNQDVKVNVIGLDF 177
Query: 172 PHMRVIIENDN--------------LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ V +E+DN L K + + K++ + T
Sbjct: 178 VNTEVKLEDDNGKIVGKTPKLRNEIFLCDMCKNVGGIVIPIQQAIDTLLLFKSKKVLSRT 237
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
FRG+L+++ +KI VWVYKKT + PT K+ S + + +V+++ Y S +DP
Sbjct: 238 TFRGNLDIAGNIKIPVWVYKKTEKTSLPTAKRLSLVSRRANTGGDGDVQMERCYYSYDDP 297
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+ ++ +K Y+YG VP + +A+K+K K + +LGFTD NI R ++M +
Sbjct: 298 DNQIEKDKTVKAYKYGKNFVPFNIVNEKALKYKSSKGITVLGFTDEKNIDRSHFMAETYS 357
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
FIA+P + A +A+S+ RA+ E+ V I+ V+R + +G L P++ +
Sbjct: 358 FIAKPDDPFAQIALSSFIRALSELEMVMIITYVYRDDLEP-KLGFLYPHIGTN---SECL 413
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG------KGEIL 451
YFN LPFAED+RE+ F SFS + + +E+Q +AA++L+K +DL + K E +
Sbjct: 414 YFNALPFAEDIREYPFKSFS----TVKHSEEQLQAAEDLIKSMDLMDADEDENGEKSEAM 469
Query: 452 QPELTPNPALEVLNIC 467
+P NP ++ C
Sbjct: 470 KPTCIYNPLVQHFYDC 485
>gi|330843657|ref|XP_003293765.1| hypothetical protein DICPUDRAFT_158675 [Dictyostelium purpureum]
gi|325075874|gb|EGC29713.1| hypothetical protein DICPUDRAFT_158675 [Dictyostelium purpureum]
Length = 769
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 257/501 (51%), Gaps = 45/501 (8%)
Query: 4 TREALLLLLDVSPSMHSVLP-----------DVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
++EA++++LDV M SVL D + + L Q+KLIY K E+G++L GT
Sbjct: 6 SKEAVVIVLDVGIGMTSVLSNNNNNETSPIEDALRSVTLLYQQKLIYSKKDELGLVLIGT 65
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKK 112
+ T+N L + GY+H+ V DI+ ++ L++L G GD +D+++V +DMLIK+
Sbjct: 66 KGTKNNLQDD--GYQHITVASDIEEPSIETLKYLENLGPGESKGDVIDSLIVAMDMLIKR 123
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
E K +K + L+T+A P+ D+ +DQ I ++ G+ + ++ +
Sbjct: 124 -TENKKYQKRIFLVTNAKDPINTDDLTIVKDQFKKIDVKLNIIGVDFTDEEELKKINNK- 181
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
+ +N+ L F+ + V + +++ + T FRG LE+S ++KI
Sbjct: 182 NFTNKQKNEIFLREFADSVDGVLVPVKQALEMMSFFRSQSVLQRTSFRGALEISPELKIP 241
Query: 233 VWVYKKTGEEKFPTLKKYS----DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK 288
VW + K ++ PTLKK S +K P+ T +V + + S+ DP + + + +K
Sbjct: 242 VWGFLKMKQQNLPTLKKISVLAQEKIPTP---TTLDVTQETFFYSITDPDQEISKDDLLK 298
Query: 289 GYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
GY+YG ++P S + +K+ + +K+LGF D +I +Y M +F+A P + +A
Sbjct: 299 GYKYGKSLIPFSKIDESQLKYSSASRCLKVLGFVDRDSIPLYYNMGCSEMFVAAPKDKQA 358
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV------SEKINIPDSF---- 397
++SA R M E N+ +VR V G + +G + P + E I + F
Sbjct: 359 EQSLSAFIRGMIETNQAMLVRYVKTMG-SAPYLGYMIPKIKSYNDDDENDGIEEKFIECL 417
Query: 398 YFNVLPFAEDVREFQFPSFS-KFPV---SWQPNEQQQEAADNLVKMLDLAPSGKG----- 448
YFN LP A+D+R++QFPS S K P+ S+ PN++Q +A L+ +DL G
Sbjct: 418 YFNHLPLADDIRQYQFPSLSLKNPLTRKSFIPNKEQLDATQQLIDSMDLMGGGGDGDEEE 477
Query: 449 --EILQPELTPNPALEVLNIC 467
++L+P T NP L+ C
Sbjct: 478 SIQMLKPSFTYNPLLQHFYQC 498
>gi|66808247|ref|XP_637846.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
gi|74853480|sp|Q54LY5.1|XRCC5_DICDI RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=ATP-dependent DNA helicase 2 subunit ku80
gi|60466265|gb|EAL64327.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
Length = 796
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 258/514 (50%), Gaps = 59/514 (11%)
Query: 5 REALLLLLDVSPSMHS-----------VLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
+EA++++LD+ M S + D + + L Q+KLIYGK ++G++L GT+
Sbjct: 8 KEAVVVILDIGLGMTSKDSDGTTTTTSSIEDALRSVTLLYQQKLIYGKKDQLGLVLIGTK 67
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY 113
T+N L + GY+H+ V+ DI+ ++ L++L G GD +D+++V +DMLI+K
Sbjct: 68 GTKNNLQDD--GYQHITVVSDIEEPSIETLKYLENLAPGESKGDVIDSLIVAMDMLIRK- 124
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL---SG 170
E K +K + L+T+A P+ D+ DQ I ++ G+ + ++ +
Sbjct: 125 TENKKYQKRIFLVTNARDPINTEDLSIVRDQFKKIDVKLNIIGVDFLEEIEENNMDTSNN 184
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK 230
+ + +N+ L F++ + V + +++ + T FRG LE++ ++K
Sbjct: 185 NKNKSLKEKNEIFLREFAESVDGVLVPVKQALEMMSFFRSQSVMTRTSFRGALEITPELK 244
Query: 231 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA--------------------------THE 264
I VW Y K ++ P+LKK S A + T +
Sbjct: 245 IPVWGYLKMKQQLLPSLKKISSIAQQQIEQQQQQQQQQNKNKNNEDNEDNEEGKPNITLD 304
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V + Y S+ DP + +KGY+YG ++P S + + +K+ K +K++GFTD
Sbjct: 305 VNQEVSYYSITDPDNEILKPDLLKGYKYGKSLIPFSKIDEDQLKYSSSKCLKVVGFTDRK 364
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
+I +Y M + +F+++PG+ ++ A+S+ A+ E ++V +VR V + S +G +
Sbjct: 365 SIPIYYNMGNTEVFVSQPGDKQSEEALSSFIHALVETDQVMVVRYV-KTMNGSPYLGYMI 423
Query: 385 PNV-SEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFPVSWQ---PNEQQQEAADNLVKM 439
P+V S+ + Y+N LP A+D+R++QFP S K P++ + PN +Q EA L+
Sbjct: 424 PHVKSDYV----CLYYNHLPLADDIRQYQFPPISPKNPLTRKSNIPNAEQLEATQQLIDS 479
Query: 440 LDLAPSGKGE------ILQPELTPNPALEVLNIC 467
+DL S E +L+P T NP L+ C
Sbjct: 480 MDLMKSEFDEDGDPIQMLKPRFTYNPLLQHFYQC 513
>gi|403353375|gb|EJY76224.1| ATP-dependent DNA helicase [Oxytricha trifallax]
Length = 776
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 258/538 (47%), Gaps = 104/538 (19%)
Query: 4 TREALLLLLDVSPSMHSVL-PDVEKLCSR----------LIQKKLIYGKNHEVGVILFGT 52
+EA++++LDV +M+ L D E +R L ++KL+Y HE+G++L T
Sbjct: 2 NKEAIVVILDVGSTMNKNLGNDDENGETRFQTALESVKMLFEQKLLYAAGHEIGIVLINT 61
Query: 53 EETENELTKEVGG-YEHVKVLQDIKVVDGHLVQSLKHLPQGTC--------AGDFLDAIV 103
+E+ N L Y+HV +DI +D ++S + L Q C GD LD ++
Sbjct: 62 KESSNALNDAYSDQYKHVTTYRDIYKLD---LESFRQLEQIQCEKAPIKDNGGDLLDGLI 118
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK--- 160
VG+DML++ GE K KK + LITD G +E Q Q V + +
Sbjct: 119 VGMDMLVRHCGER-KVKKRVFLITD----------GERETQYDQKELQQVIQTINERDAR 167
Query: 161 -NIVV----------------------RASLSGEPH-MRVIIENDNLLNIFSKKSSAKTL 196
N++ + L +P+ + +N L+ ++K
Sbjct: 168 LNVITLDFCDDLAEDEDEDEEDEDQSKKKQLKMQPNETKAQFKNKKFLSELTEKVKGAIF 227
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ K R++ T +RG+L++S+ K+ V +Y +T EE FPTLKK+S A
Sbjct: 228 PAKVAIEIYQQFKKREVMARTKYRGNLDISKNCKLNVQIYSRTREEVFPTLKKHSLVADD 287
Query: 257 TDKFATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---- 311
+ VKV+ + ++DP ++ VPP+Q+IK + YG Q+VP++ +K+KP
Sbjct: 288 SKNAKEGLVKVERQLAEIDDPDQIAVPPDQQIKAFNYGKQLVPVAKENEHVLKYKPTKEG 347
Query: 312 ----------------------EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
EK KLLGFTD S + RH+++ V++ + G S+
Sbjct: 348 EEETPSNEYVDDKDIKLQSSDYEKEFKLLGFTDQSKVPRHHFIAGVDVVLPVRG-SKNER 406
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A +AL AM E ++V I R + R+ +V VL P++S+K + Y LP E++R
Sbjct: 407 AFAALVYAMIETHRVLIARIIERKNADPKLV-VLYPHISKKKPL---LYMAQLPTNEEIR 462
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA-----PSGKGEILQPELTPNPALE 462
++QFPS P S Q++AA L+K LDL P + E L+P+LT NPAL+
Sbjct: 463 DYQFPSL--VPASR----DQKQAAKELIKALDLTKDVNEPEVEEEKLKPDLTFNPALQ 514
>gi|348676446|gb|EGZ16264.1| hypothetical protein PHYSODRAFT_316299 [Phytophthora sojae]
Length = 770
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 242/504 (48%), Gaps = 63/504 (12%)
Query: 1 MARTREALLLLLDVSPSMHSVL-------------PDVEKLCSR----------LIQKKL 37
M+R +EA+++LLDV SM L P E +R ++Q+KL
Sbjct: 1 MSRAKEAVVVLLDVGASMRVPLRERVAASDKNRQDPGDELQHTRFAASIAAVEGVVQQKL 60
Query: 38 IYGKNHEVGVILFGTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCA 95
+ EVG++ +G+E+T+N+L +E G Y +V+V+ I H+++ L+ L
Sbjct: 61 FFKPKDEVGIVAYGSEDTDNQLNEEQGESEYRNVQVVNSIDSPTLHMIKRLRELKPSRSE 120
Query: 96 G---DFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
D LD ++V +D+L ++ G+ Y K L +ITDA + D G E V+ I
Sbjct: 121 DTKVDILDGLIVALDLLFRRTDGKKYD--KRLMVITDAAAKI--ADAGDLESVVTMIQNM 176
Query: 152 MVAF---GLRMKNIVVR-------------ASLSGEPHM-------RVIIENDNLLNIFS 188
V GL ++ ++ A++ EP R+ EN+ +L +
Sbjct: 177 EVKLQVIGLDFQHTTIKPQKDKEGDEEMPEANVKDEPDAGGAPGPERIKAENEKMLVSIA 236
Query: 189 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 248
+ + V L + ++ T FRG LE + + I V+ Y KT PTL
Sbjct: 237 NEVGGEVCSVSKRMHLLAQGMKKTVALTTKFRGPLEFGDALGIPVYCYLKTKTATLPTLS 296
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
K S S +K A +VK+D Y S ++ + VPP+Q++K YRYG + VP +SA+ E K
Sbjct: 297 KESQS--SYEKEAAGKVKLDRRYTSPQNIDEEVPPDQQVKAYRYGAEKVPFASADVEFFK 354
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
F+ EKS+K+LGF D + I ++ ++F+AEPG A +AL AM E+++V + R
Sbjct: 355 FQTEKSLKVLGFLDKAQINHAKFVAGTDIFVAEPGKPHAATCFAALIDAMVELDQVIVAR 414
Query: 369 CVWRQGQQSVVVGVL--TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 426
V R+ +V ++ P+ + N + + LP+ EDVR ++F + P
Sbjct: 415 FVARKNAAPKIVALIPHAPSSGQGENYY-AMWSQQLPYEEDVRNYEFAPLKS--RKYTPT 471
Query: 427 EQQQEAADNLVKMLDLAPSGKGEI 450
+ QQ AD LV L + E+
Sbjct: 472 DGQQALADKLVDSLSIRDDKADEV 495
>gi|440800306|gb|ELR21345.1| ATPdependent DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 753
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 260/526 (49%), Gaps = 85/526 (16%)
Query: 2 ARTREALLLLLDVSPSMH-------------------------------SVLPDVEKLCS 30
A +REA++++LDV SM S L K
Sbjct: 3 AASREAVVVILDVGASMATQQRCSSSSSRPTMGASSSSAAAACASVSTTSGLEQAVKAVE 62
Query: 31 RLIQKKLIYGKNHEVGVILFGTE------------ETENELTKEVGGYEHVKVLQDIKVV 78
L+Q+KL++ E+G++LFGT ET N+L+++ GY+H+ V ++I
Sbjct: 63 LLVQQKLMHPSRDELGLVLFGTRGTCLLLIAIVITETHNQLSED--GYQHITVAREIMGA 120
Query: 79 DGHLVQSLKHL-PQGTCAGDFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPLKDP 136
D L++ + + P+G D +DA++VG+D+LI+K G+ Y+ K + L+TDA CP+
Sbjct: 121 DIDLLRYISTITPEG---ADVIDALIVGMDLLIRKTAGKRYE--KRIFLVTDAGCPVNQD 175
Query: 137 DVGTKEDQVSTIARQM--VAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
D+ +Q I ++ + G + S +N+ L+ F+++
Sbjct: 176 DLDVVCEQFLKIDARLNVIGVGFEEDDDQRAGSQDDNDKAEFKRKNERLIREFAERVHGV 235
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
+ V + K + + T RG LE+S +KI VW Y KT E K PTLKK S
Sbjct: 236 VVPVQRAIEMMSFIKPKPVLQRTSHRGCLEISAHVKIPVWSYIKTMERKLPTLKKVS--- 292
Query: 255 PSTDKFATHEVKV----DYEYKSVEDPSKVVP---PEQRIKGYRYGPQVVPISSAEWEAV 307
++ V + E + + P P P++++KGY+YG +VP S + +
Sbjct: 293 ------VVSQLSVWGEEEEEGRQLNAPPSRYPSVAPDEKVKGYKYGKTLVPFSMVDEAVL 346
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ K ++L+GFT A N+ RH ++ +V + EPG+ A A+SALA A+ E +AIV
Sbjct: 347 KYEAAKCLQLIGFTSAKNVPRHQFLGNVECIVPEPGDGSAAAALSALAHALAETGSLAIV 406
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ 424
R V R + + +G L+P++ PD YF LPFAED+R++ F S ++ ++
Sbjct: 407 RYVKR-NKGNPYLGCLSPHIK-----PDFACLYFCALPFAEDLRQYPFASLARPLRKAYA 460
Query: 425 PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALEVL 464
P+E+Q EA L+ +DL + E ++P+ T NPAL+ L
Sbjct: 461 PSEEQLEATQALIDSMDLMTAATDEDGNPMEAVKPKYTYNPALQNL 506
>gi|301096669|ref|XP_002897431.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107122|gb|EEY65174.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 767
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 237/503 (47%), Gaps = 62/503 (12%)
Query: 1 MARTR------EALLLLLDVSPSM-----------------------HSVLPDVEKLCSR 31
M+RT+ EA+L+LLDV SM H+
Sbjct: 1 MSRTKVCVLVPEAVLVLLDVGASMRAPLRERVSVSDKNRQDTDNDLQHTRFAAALAAVEN 60
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHL 89
++Q+KL + EVG++ +G+E+T+N+L +E G Y +V+V+ I H+++ L+ L
Sbjct: 61 VVQQKLFFKPKDEVGIVAYGSEDTDNQLNEEQGQGEYRNVQVVNSIDSPTLHMIKRLREL 120
Query: 90 PQGTCAG---DFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPLKDP-DVGTKEDQ 144
D LD I+V +D+L ++ G+ Y K L +ITDA + D D+ +
Sbjct: 121 KPSKSEETKVDILDGIIVALDLLFRRTDGKKYD--KRLLIITDAAAKIADAGDLESVVTM 178
Query: 145 VSTIARQMVAFGLRMKNI--------VVRASLSGEPHM-------RVIIENDNLLNIFSK 189
+ + Q+ GL ++ + S+ EP RV EN+ +L +
Sbjct: 179 MQNMEVQLQVIGLDFQHTTTAKKADEMAETSVKDEPMELATSGPDRVKAENEKMLVSIAN 238
Query: 190 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 249
+ + V L + ++ T FRG LE + + I ++ Y KT PTL K
Sbjct: 239 EVGGEVSSVSKRMQLLAQGMKKTVALTTKFRGPLEFGDTLAIPLYCYLKTKTATLPTLSK 298
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
S S +K +VK+D Y S ++ + VPP++++K YRYG + VP +SA+ E KF
Sbjct: 299 ESQN--SYEKETAGKVKLDRRYTSPQNVDQEVPPDEQVKAYRYGSEKVPFASADIEFFKF 356
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ EKS+K LGF D S + ++ ++FIAEPG A +AL AM E+++V I R
Sbjct: 357 QTEKSLKALGFLDRSQLNHSKFIAGTDVFIAEPGKPHAATCFAALIDAMVELDQVIIARF 416
Query: 370 VWRQGQQSVVVGVL--TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
V R+ +V ++ P+ E + + LP+ EDVR ++F + P+
Sbjct: 417 VPRKNAAPKIVALIPHAPSSGENFY---AMWAQQLPYEEDVRNYEFAPLKT--RKYTPSS 471
Query: 428 QQQEAADNLVKMLDLAPSGKGEI 450
+QQ AD LV L + E+
Sbjct: 472 EQQALADKLVDSLSIRDDKADEV 494
>gi|255080024|ref|XP_002503592.1| predicted protein [Micromonas sp. RCC299]
gi|226518859|gb|ACO64850.1| predicted protein [Micromonas sp. RCC299]
Length = 715
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 236/527 (44%), Gaps = 79/527 (14%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MA + L++DVSPSMH L V SR++Q +++ + E +I FG++ET N++
Sbjct: 1 MATRKRCTALVVDVSPSMHPHLGPVGDHLSRVVQNRILNARIDEFALIAFGSDETNNDVH 60
Query: 61 KE-------VGGYEHVKVLQDIKV---------VDGHLVQSLKHLPQGTCAGDFLDAIVV 104
E G ++ + ++I V +V SL+ + G+ D+L+A+VV
Sbjct: 61 TEGLDAAAASGERDYEEEYRNIAVKVPMGCCSSESAEVVASLRGM-AGSAPSDYLEALVV 119
Query: 105 GVDMLIK-KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 163
DML+ + G + + + L+TD P + +D + IAR M A +++ V
Sbjct: 120 ASDMLVNHQRGGAFL--RRIMLVTDLRTPCE-----VDDDFIEDIARGMRAVDMQLTVAV 172
Query: 164 VRASLSGEPHMRVIIEND------------NLLNIFSKKS----SAKTLFVDSTTSLRGA 207
VR S + R+ E+ +LLN S K + ++ D +L+ A
Sbjct: 173 VRGEESEDETTRIQEEDTVMANRETLQRLCDLLNEPSDKGPVAVTNRSCIEDHAAALQAA 232
Query: 208 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+ + P T FRGDLE + M +KVWVYKK E K P +K YSD A V
Sbjct: 233 -QVKTTKPTTTFRGDLEFTPWMSLKVWVYKKVSEAKPPAMKMYSDAA-DEAAGDDPTVGR 290
Query: 268 DYEYKSVEDPSKV--VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
+ ++S DP V PE I Y YGP +PI E + + +K +K+ GFT
Sbjct: 291 ERVFRSYADPDAPVDVAPEMMISAYPYGPANIPIQDEVKELIAARNDKGMKIFGFTSLDQ 350
Query: 326 ILRHYYMKDVNLFIAEPG-------------------NSRATVAVSALARAMKEMNKVAI 366
+ M + + + P + +AT A+SA+ARAM+ + A+
Sbjct: 351 VPHWMGMDEPRVLVPWPTKDGSLAAGMAASAGATDREHRKATEAMSAMARAMQRKGQAAL 410
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF---------- 416
VR VW Q V G LTP+++++ D F LPFAED+ F
Sbjct: 411 VRAVWTQNSDKVSFGALTPHITKEG---DFLLFVPLPFAEDMYSNDFKPLPVPGCKAAAQ 467
Query: 417 --SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
+ P ++Q+ AA LV LD + + L P LT AL
Sbjct: 468 LGANAKAKLVPTDEQRAAAAALVDSLDGSGPDPWDCLNPSLTRTHAL 514
>gi|298711254|emb|CBJ26499.1| ku P80 DNA helicase, putative [Ectocarpus siliculosus]
Length = 496
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 220/426 (51%), Gaps = 31/426 (7%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETE--NELTK-EVGGYEHVK---VLQDIKVVDGHLVQS 85
L+ +K++ K HEVGV+LFG E E N+L + E Y VK +L V V++
Sbjct: 15 LMVQKMLQSKQHEVGVVLFGLPEAETANQLNEAETSDYLGVKEYCLLDKGSVAVLRKVEA 74
Query: 86 LKHLPQGTCA-GDFLDAIVVGVDMLIKKYGETYKGK--KHLCLITDALCPLKDPD----- 137
+ G A GD LDA+VVG+ M+ + T K K +H+ L+TDA P+ +
Sbjct: 75 MNVPDSGEPATGDLLDAMVVGMHMIRSR---TLKKKYIRHVYLLTDAATPVAEVSQLGDI 131
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
VG D + FG + + E V +N+ +L + + +
Sbjct: 132 VGMYTDPTMECRLHFIGFG--------HGAPAEEGGGTVKEQNEKMLASVAAATRGTVVP 183
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA--P 255
+ L G + +PV + + DL L + + +KKT +LKK S + P
Sbjct: 184 AQTVVDLMGESTIKTTNPV-LSKVDLSLGTNLTLHCRFFKKTDTGLKESLKKESIASYDP 242
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK-S 314
+ + +V+VD Y+ E P V E ++KG+RYG +P++S + ++K E S
Sbjct: 243 AGGSGSDGKVRVDKTYRDPEMPEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPS 302
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+K+LGFT +S++ RH+YM D + ++EPG+ +A A+S+L+ AM+ +++VA+ R V R+
Sbjct: 303 LKVLGFTPSSSVERHFYMDDTFVLLSEPGSGQAAGAISSLSSAMRNLDQVAVARFVRRKS 362
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ +G+L P+ S + + F +PF EDVR F FPS +K P S P+++Q+ +
Sbjct: 363 GEP-WLGILIPD-STGVVPTERLLFQKIPFIEDVRAFNFPSLAKPPPSRTPSDEQKRVSA 420
Query: 435 NLVKML 440
+LV+ +
Sbjct: 421 SLVEAM 426
>gi|325193327|emb|CCA27667.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325193515|emb|CCA27822.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 709
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 225/453 (49%), Gaps = 39/453 (8%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVKVLQDIKVVDGHLVQSLKHL 89
++ +K+ Y N E+G++ FG++ T N L E G Y H+ + + V + SL +
Sbjct: 48 IMHQKMFYAPNDEIGMVAFGSKMTRNHLNDEHGEDQYAHIFTISHLDVPNVETCNSLSKV 107
Query: 90 PQGTCAGD------FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD-PDVGTKE 142
+ C D LD ++V +D+L ++ + K+ + L+TDA +++ D+
Sbjct: 108 SE-LCGDDKNIKVDVLDGMIVALDLLHRR-TLAMQFKRRIILLTDASSKIENTSDLEPVV 165
Query: 143 DQVST--IARQMVAFG-------LRMKNIVVRASLSGEPHMRVIIE-NDNLLNIFSKKSS 192
+ + + +A ++V F L K + + H E N+ +L +
Sbjct: 166 EMMKSLHVAIEIVVFDFVHPQEKLEKKAKEDIGCVVKQEHPTYFKEANEKMLLSLVQAVG 225
Query: 193 AKTLFVDSTTSL--RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 250
+ + V+ L RG +K + VT FRGDLE+ I V+ + K P+L K
Sbjct: 226 GQLVSVEEEIKLLKRGMKKR--VMQVTKFRGDLEIG-SFGIPVYCFIKVKMSTLPSLMKE 282
Query: 251 SDKAPSTDKFATHE-VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
S+ + HE V+ D Y + P + VPP+QRIK Y YG + VP SSA+ EA KF
Sbjct: 283 SELSQEK-----HEGVRQDRRYMDPDSPDEEVPPDQRIKAYTYGHESVPFSSADLEAFKF 337
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
EKS+KLLGF DA ++ +M + N+F+++P A + L AM+ N+VAI R
Sbjct: 338 HTEKSLKLLGFVDAKSVHPANFMVNTNVFLSDPTKKNAATCFATLVNAMRMKNQVAIARF 397
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIP-DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 428
V R+ V+ L P++ K IP +F+ LPF ED+R+F+FPS + P+++
Sbjct: 398 VPRKNAAPKVIA-LIPHIPAK-EIPYHAFWSQQLPFEEDLRDFEFPSILQDNSKSIPSKE 455
Query: 429 QQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
QQ+ A++LV L S + + P NP L
Sbjct: 456 QQQIANSLVDGL----SVDDDEINPRTCYNPVL 484
>gi|340374936|ref|XP_003385993.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 878
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 222/486 (45%), Gaps = 69/486 (14%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++ ++LL+DV P M H+ L K+ +++ +K+ G EVGV+LF
Sbjct: 6 KDFIILLIDVGPEMGDVPLSVGGAGGDDHTHLESALKIAQQIVFQKIFSGSKDEVGVVLF 65
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDML 109
GT +T+N L+ + GGY+++ + D+ L + LK + G DF+DAIVV +D+L
Sbjct: 66 GTADTDNHLSAD-GGYQNISSVWDVTTPTTELAKYLKEKVKCGPAPADFIDAIVVAIDIL 124
Query: 110 IKKYGETYK-GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI------ 162
+K K G+K + L TDA G +DQ+ I GL+ KNI
Sbjct: 125 VKVTSNKKKVGEKKIYLFTDA-------SSGCSDDQIKEIIE-----GLKSKNIDLVIIG 172
Query: 163 --------------VVRASLSGEPHMR-----------VIIENDNLLNIFSKKSSAKTLF 197
S+ G H R E + +L++ + + ++
Sbjct: 173 PTLPNSETEDDRNDDNDDSVPGPSHGRRPPAPHYKKTPAQEEGERVLSLLVSEGAGRSFS 232
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
++ T F G LE+ ++KI ++ K+ E+ T KK S + S+
Sbjct: 233 FHDAMNISSFISKNAKKQTTRFAGVLEIGPQLKIPCKIFTKSMHERPATWKKLSAISQSS 292
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
T + ++ Y ++ V IKGYRYG ++P+SS + + +K K + L
Sbjct: 293 ANPGTMAINLERSYHLQDEDETEVDLSDTIKGYRYGRSLIPVSSEDDDNMKLSASKCLSL 352
Query: 318 LGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGFT + + + + V + IA P + + V++SA+ RA+ EM+ I R V+R
Sbjct: 353 LGFTSRNKVRQELLVGSSVQVLIANPDSEPSAVSLSAIIRALYEMDMAGIARYVFRN-NA 411
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
S + L P++ P+ LP+ ED+R+F F S S +P+++Q A D L
Sbjct: 412 SPRLCALVPHIK-----PNYEVGGTLPYMEDLRQFSFASLSH--PKLEPSDEQLTAVDEL 464
Query: 437 VKMLDL 442
+ ++L
Sbjct: 465 INNMEL 470
>gi|443717141|gb|ELU08335.1| hypothetical protein CAPTEDRAFT_163248 [Capitella teleta]
Length = 723
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 237/507 (46%), Gaps = 64/507 (12%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDV-----EKLCS--RLIQKKLIYGKNHEVGVILFGTE 53
MA +EA+ ++LDV P M+ P E + + ++Q+KL EV +IL GT
Sbjct: 1 MAANKEAIAIVLDVGPGMNQAPPGCTTPIEESITAIQMILQRKLFSESKDEVALILLGTP 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIK- 111
T NEL + G Y ++ + + I VD L+Q +++ + + + DF+ A+VV +D ++K
Sbjct: 61 NTANELADDDGNYANITLAKPIGPVDWQLLQYVQNDIHPSSFSADFISAVVVAMDHIVKG 120
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF---GLRMKNIVVRASL 168
G+ K + L ++ D + ++ V ++ Q + F G M +
Sbjct: 121 TSGKKGFASKRIILFSNLCGEFGDDHL---DNIVGSLKGQDIEFDVIGPEMDDDDDDDGD 177
Query: 169 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT-----SLRGA---------RKTRDIS 214
+ P +N + + A F+ T S R A R+ R
Sbjct: 178 NPRPGTSG--QNQKPKSTQQRAGEALVKFIQETVEGCSYSFREALAALSNYLSRQVRS-- 233
Query: 215 PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--DKFATHEVKVDYEYK 272
T +R ++E+ ++KI + ++ + E K + K + P+ ++ H + D E
Sbjct: 234 --TAWRCNMEIGSELKIPINLFTRIKEAKAKSFKNVYARDPNAALERNRAHHLN-DAEET 290
Query: 273 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM 332
+E E + G+RYG +VP S+ + EA+K++ EK K+ GFT + N+ HY M
Sbjct: 291 EIE-------REDTVDGHRYGSTLVPFSADDKEAMKYRSEKCFKVFGFTKSENVRTHYKM 343
Query: 333 KDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
D + +AE + A VA+SA A+ E N VAIVR V+ +V +G L P + +
Sbjct: 344 GDATWVCVAEKSDEAAAVALSAFINALYETNCVAIVRRVY-NNNGAVRIGALVPQIEAE- 401
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA--------ADNLVKMLDLA 443
+ +N LPFAEDVR + SF PVS + Q++A D L+ +DL+
Sbjct: 402 --NECLIYNELPFAEDVRNY---SFGSLPVSETNSANQRQAPTDDQLSLMDELIDNMDLS 456
Query: 444 ---PSGKGEILQPELTPNPALEVLNIC 467
++L PE+T NP L+ L C
Sbjct: 457 KVETDDDCQVLDPEVTFNPYLQRLFQC 483
>gi|307108658|gb|EFN56898.1| hypothetical protein CHLNCDRAFT_144569 [Chlorella variabilis]
Length = 674
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 233/510 (45%), Gaps = 59/510 (11%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKK----------LIYGKNHEVGVILF 50
M+ RE+++ LLDV P MH + + + +K +++ EV ++LF
Sbjct: 1 MSNKRESVVFLLDVGPRMHPHVAHAARAAGDFMTQKASRRARPTPAMLHKVKDEVCLLLF 60
Query: 51 GTEETEN-ELTK---EVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV 103
GT +T+N E TK E GG Y H+ D+ + +++L L G DF +A+
Sbjct: 61 GTSKTDNREHTKSAMEEGGEGEYAHIVEAHDLAPPEASYIKTLHTLQGGQGRSDFKEALA 120
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDALCPLK--DPDVGTKEDQVSTIARQMVAFGLRMKN 161
V +L+++ K + L+T+ LC DPD D +++ +A GL+ +
Sbjct: 121 VAAAVLVQE--REAASAKRIVLVTN-LCSRAQDDPD-----DALTSC----LAEGLQHQG 168
Query: 162 IVVRASLSGEPHMRVIIENDNLLNI-----FSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
I + L P E D N+ ++ S + S +L GA ++
Sbjct: 169 IFLDVLLLDVPEDDERYEQDKTYNLNQVAAICQELSHRERHFSSALALTGAFPAHEVLAR 228
Query: 217 TIFRGDLELSEKMKIKV-------WVYKKTGE---EKFPTLKKYSDKAPSTDKFATHEVK 266
+ G L + K+ IK W+ K G+ EKFP + S + A V
Sbjct: 229 AYYSGVLSIGTKLNIKAGTAGLYSWLVKTAGKADKEKFPAAGRESTVVEGVVEAALEGVD 288
Query: 267 V------DYEYKSVEDPSKVVPPEQRI-KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
+Y Y E+ PEQ + YRYG +VP + + + F E+ +KL+G
Sbjct: 289 TGVPRGREYYYVDQEEHGPEEVPEQEVASAYRYGINLVPFEADQRRDLAFPTERGMKLIG 348
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F I RH YM ++ +A+ + + VA++AL M+ + AI+R V + + +
Sbjct: 349 FLPEDAIPRHLYMAKCDVVVADKASQASCVAMAALVAGMRRQRQKAILRWVAKAYSRPEL 408
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+ +P + + P N LPF ED+R+++FPSF+K SW+P+E Q EAA LV
Sbjct: 409 F-LASPVPAGATSAP-HLLLNALPFMEDLRDYRFPSFTK--KSWEPSEAQVEAAAALVAS 464
Query: 440 LDLAPSGKGEILQPELTPNPALEVLNI-CG 468
+ L G E L PE TP+PAL L CG
Sbjct: 465 MSLG-QGDLEQLLPERTPDPALHRLYFECG 493
>gi|326431135|gb|EGD76705.1| hypothetical protein PTSG_08056 [Salpingoeca sp. ATCC 50818]
Length = 534
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 232/481 (48%), Gaps = 62/481 (12%)
Query: 1 MARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
M+R+ + ++LDV PSM S L K +Q+K+++ K EV +I FG
Sbjct: 1 MSRSGDLTAIVLDVGPSMSTKLSSGKSHLETAVKAIDLFVQQKVLHTKKDEVALITFGDN 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HLPQGTCAGDFLDAIVVGVDMLIKK 112
ET+N L + G Y+H+ V + + D L++ ++ + G DF+DA+VV +D LI
Sbjct: 61 ETDNPLASD-GEYQHICVRRTLTSPDLDLLRFIETEIQPGDQPTDFVDALVVALDCLITG 119
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
+ KK + + TDA P+ D + DQ I M A G+ ++ I V
Sbjct: 120 GEKKKGDKK-IYMFTDAGSPVNDSSL----DQ---IIDGMKAHGIDLRVIGVGID----- 166
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
+S + +K V I + ++ E +I
Sbjct: 167 -------------------EDGDEDDESVAHMTQTQKEN----VQIIKRIVDAVEG-EIP 202
Query: 233 VWVYKKTGEEKFPTLKKYS---DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKG 289
V++Y + E PTLKK S D P+ A E +V Y +K ED ++V P E+RIKG
Sbjct: 203 VFLYTEEKREPRPTLKKLSALVDLDPTDADSAKVEREVTY-HKLDEDETEV-PGEERIKG 260
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
YRYG +VP E + KP+K + ++ FT N+ RH+ ++ + + + A
Sbjct: 261 YRYGRTIVPWEKMHEENLTLKPDKELSVICFTHQDNVPRHHQLEPLLCVLPAHDDEDAAR 320
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
++ LA+A+ EM VAIVR V+R + + +G+L P +SE+ Y+ LPF ED+R
Sbjct: 321 GIACLAQALHEMESVAIVRYVFR-NKAAPKLGMLFPTISEEYK---GLYYVSLPFREDIR 376
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA------PSGKGEILQPELTPNPALEV 463
++F S +K + +++Q+ A ++++ +DL + E +PE T NPA+++
Sbjct: 377 PYEFASLAKNK-NADFDKEQRAAVEDVIASMDLMKGYVDEDGDEVEAYEPEYTFNPAIQM 435
Query: 464 L 464
Sbjct: 436 F 436
>gi|260786747|ref|XP_002588418.1| hypothetical protein BRAFLDRAFT_164247 [Branchiostoma floridae]
gi|229273580|gb|EEN44429.1| hypothetical protein BRAFLDRAFT_164247 [Branchiostoma floridae]
Length = 716
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 238/499 (47%), Gaps = 64/499 (12%)
Query: 7 ALLLLLDVSPSMHSVLP-------DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L++DV P M P + + S L+Q+K+ EV +IL GT+ET NEL
Sbjct: 1 AMVLVVDVGPLMAQAPPGHVTPLENAKDAISMLLQRKMFSQSKDEVALILLGTQETANEL 60
Query: 60 T-KEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK-YGET 116
+ Y ++ V + + D L++ +K+ + G + DF+DAIVV +D++ + G+
Sbjct: 61 AGTDDESYLNITVARPLGQPDFDLLEFVKNDIVPGPVSADFVDAIVVALDLVRNQTMGKK 120
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE----- 171
++ K+ + L ++ D + + + + + GL + + + +
Sbjct: 121 FETKR-IVLFSNLAGEFTDDQLEGVINGMKALECEFNLIGLSLDDDDEDGDMPDQNGAGP 179
Query: 172 ------PHMR--------VIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
P R VI E D + +S++S+ + L ++R A P
Sbjct: 180 PRKERTPQQRAGTALIRHVIEEVDGV--AYSERSALQMLSFFQKRNVRAA-------PWK 230
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF-ATHEVKVDYEYKSVED 276
+ LE+ +KI V + + E K + KK + S D THE +++ + ++
Sbjct: 231 VM---LEVGTNLKIPVRGFIRVKECKPNSFKKVHARTLSKDDIHTTHEHRLNDDEET--- 284
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKD- 334
P E I GYRYG +VP S+ + +KFK + K +LGFT A N+ R YYM D
Sbjct: 285 -----PVESTIDGYRYGNTIVPFSTDDESQMKFKTDAKCFDVLGFTRADNVKRQYYMGDS 339
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 394
V F+AE G+ A VA+SA A+ E N VAIVR V+ + + V LTP++
Sbjct: 340 VRCFVAEEGDEPAAVALSAFIHALYETNMVAIVRYVYNKN-SAPKVAFLTPHIKPNY--- 395
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 449
+ +LPF ED+R++ F S + QP++ Q A D+L+ ++L K E
Sbjct: 396 ECLLCIMLPFMEDMRKYTFSSLHPNNKN-QPSDDQLSAVDDLIDNMNLVMPDKDEDGKQQ 454
Query: 450 -ILQPELTPNPALEVLNIC 467
L+P+LT NP L+ L C
Sbjct: 455 QYLKPKLTFNPHLQRLYQC 473
>gi|196014368|ref|XP_002117043.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
gi|190580265|gb|EDV20349.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
Length = 784
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 233/510 (45%), Gaps = 110/510 (21%)
Query: 5 REALLLLLDVSPSM------HSVLPDVEKLCSRLIQKKLIYGKNH-----EVGVILFGTE 53
+EA+ + LDVSPSM H+ + +I + ++ + H E ++LFGT+
Sbjct: 26 QEAIAICLDVSPSMCYAPQGHASKLETSVNAINMIVSRKMFSQGHLANKDEFALVLFGTQ 85
Query: 54 ---------------------------ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL 86
E++N+L ++ G YE++ V++ + D + ++ +
Sbjct: 86 ARKRIDNYTACSTKNALSVIDIFVYCLESDNDLYED-GQYENISVVRPLGPPDLNFLRYI 144
Query: 87 KHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVS 146
+ T LD+I+V +D+L K G K + L +D P D DQ+
Sbjct: 145 Q-----TNIAPVLDSIIVAMDLLKKSTSGKKFGDKRIILFSDLGSPFAD-------DQI- 191
Query: 147 TIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT-SLR 205
+GE ++ I+E VD + SLR
Sbjct: 192 ----------------------AGESTLKKILE-----------------IVDGDSHSLR 212
Query: 206 GARKT------RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
A T R I T+FRG LE+ K+KI + Y K E K + KK S + ++++
Sbjct: 213 SALSTLSFFQKRSIKMTTVFRGPLEIGSKLKINTYAYIKVRESKPESWKKLSAISEASNQ 272
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
+VK++ Y ++ + E KGY+YG +VP + E++K K K + +LG
Sbjct: 273 PGDMKVKIERSYHLNDEDETEIERENLAKGYKYGKTIVPWLKIDEESMKLKAAKCLSVLG 332
Query: 320 FTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
FT + N+ RH+ M D V +F+ P + A VA SAL +A+ E +KVA+VR V+R Q
Sbjct: 333 FTKSENVKRHWLMGDGVVVFMPAPNDEPAGVAFSALVQALYETDKVAVVRYVYRNNSQP- 391
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
+G+L P + S F LPF ED+R++ F S + + P + Q + D+LV
Sbjct: 392 KLGILFPQIKATYR---SLLFIQLPFMEDIRQYTFASLTTNKKN-VPTDDQLDLVDDLVT 447
Query: 439 MLDLAPSGKG------EILQPELTPNPALE 462
+DL+ + + E L+P+LT NP L+
Sbjct: 448 SMDLSRAYRDDDGELIEALKPKLTFNPVLQ 477
>gi|390331386|ref|XP_788472.3| PREDICTED: X-ray repair cross-complementing protein 5-like
[Strongylocentrotus purpuratus]
Length = 729
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 238/509 (46%), Gaps = 70/509 (13%)
Query: 2 ARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEE 54
++ +EA++++LDV PSM+ + L + + ++Q+K+ E+ +ILFGT
Sbjct: 3 SKEKEAIVIVLDVGPSMNQAPPGNCTTLETARDVITMILQRKVFAESKDEIALILFGTPG 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HLPQGTCAGDFLDAIVVGVDMLIKKY 113
+ N++ Y+++ V + ++ D L+Q ++ ++ T +GDF+DA++V +D++
Sbjct: 63 SANKMD-----YDNITVERPFRLADLDLIQHIRSNIQASTESGDFVDALIVAMDLIHDAT 117
Query: 114 GETYK--GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN---------- 161
E K + L +D D + + + ++ GL N
Sbjct: 118 SEKASKFTKNRIILFSDLGGEFADDKLQNVTHSLKAMKTEVNMIGLPFDNTDGGGNGDDA 177
Query: 162 ---------------IVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 205
+ ++GE M ++ E + + F + A T+F
Sbjct: 178 RDQPSTSRGRGPPRKVKTPQQMAGERLVMNIVEEVNGCIYSFDEVIPAVTMF-------- 229
Query: 206 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
+ R + P T ++ +LE+ ++KI V Y K E + K K +F +
Sbjct: 230 ---EKRAVRP-TPWKVNLEIGSELKIPVSGYLKVKEATTKSWKSTFQKGHR--EFTPQTI 283
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGFTDAS 324
+ + +D V E +++GYRYG ++PIS + + + +K P K +++LGFT S
Sbjct: 284 RSKHLN---DDEETEVEKEDQVEGYRYGNDIIPISEEDKKNMDYKKPGKVMQVLGFTKDS 340
Query: 325 NILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
I +H + + V +F A+P + A ++ SAL A+ E N VAIVR + G + +G L
Sbjct: 341 KIKKHQQIGNSVYIFYAQPDDQAAAMSFSALVNALYETNSVAIVRRAY-SGSSAPRIGFL 399
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 443
P++ K N FY LPFAED+R + F S QP+E+Q A D+L+ +DL
Sbjct: 400 APHI--KANYEALFYIE-LPFAEDLRMYTFMSLDNNK-RCQPSEEQLAAVDSLIDNMDLM 455
Query: 444 PS-----GKGEILQPELTPNPALEVLNIC 467
+ G E L+P+ T NP + L C
Sbjct: 456 TAEEDEDGDTEALKPKNTLNPYTQRLCQC 484
>gi|145495442|ref|XP_001433714.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400833|emb|CAK66317.1| unnamed protein product [Paramecium tetraurelia]
Length = 738
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 234/498 (46%), Gaps = 64/498 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-KLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ + K +RL IQ+K+ KNHEVG++LFGTE
Sbjct: 4 KEATLVLLDVGASMYEPYKQAQGKNITRLELAVDCIGMMIQQKIFNYKNHEVGLVLFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC----AGDFLDAIVVGVDML 109
E E+ G +++V+ D ++L LP GD DA+ V L
Sbjct: 64 EAED------GNTFYIQVMSP---PDLEFYRNLTELPNHDVPKIKGGDIFDALDKAVSTL 114
Query: 110 IKKYGETYKGKKHLCLITDAL--CPLKDPDVGTKEDQVSTIARQMVAFGLR-MKNIVVRA 166
+Y + K +K + ++T + +G + + ++ + M V
Sbjct: 115 -DEYVKAKKMEKKIFVLTAGFGQTDYNEKKIGKLIKMIEKVDVKINFIAMDFMNEYDVEL 173
Query: 167 SLSGEPHMRVIIENDNLLNI---FSKKSSAKTLFVDSTTSLRGARK-------------- 209
+P + + ND +LN ++S L LR +
Sbjct: 174 DDPTKPENQATL-NDRMLNAVYQHQEQSINSRLIYQMVQELRNHMRIFPANIAFELYSQF 232
Query: 210 -TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
T+ + FRGD +++++ I+V +YK+ E++ P+LKK+S + + + V+ D
Sbjct: 233 HTKQMQARASFRGDFQINDETSIQVLIYKRCAEDRLPSLKKHSAIGEYSSEPTRNIVRND 292
Query: 269 YEYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
+ + EDP+ + E IKGY+YG ++P+ S E +K++ +S +LLGF + S I
Sbjct: 293 SIHYNPEDPNMNPIERENIIKGYQYGRNLIPVDSLMEEKMKYQCNRSFQLLGFVERSQIP 352
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
RHY++ +V++ IA +A ++SAL A+ KVAI R V RQ + S + +L P+
Sbjct: 353 RHYFIFNVDMVIA-IDCEKARKSLSALIIALIATKKVAIARFVGRQ-KSSPKLMLLLPHK 410
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA--PS 445
S+ F+ LP +ED+R FQF + K PN QQ A L+ ++L P+
Sbjct: 411 SKSYQ---CFWMISLPTSEDIRHFQFSTLRK----STPN--QQSAVATLIDKMNLETIPN 461
Query: 446 GKG---EILQPELTPNPA 460
G E+L+ + NP
Sbjct: 462 ESGEPEELLKMKYIANPT 479
>gi|145493174|ref|XP_001432583.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399696|emb|CAK65186.1| unnamed protein product [Paramecium tetraurelia]
Length = 739
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 234/503 (46%), Gaps = 74/503 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-KLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ + K +RL IQ+K+ KNHEVG++LFGTE
Sbjct: 4 KEATLVLLDVGASMYEPYKQAQGKKITRLELAVDCIGMMIQQKIFNYKNHEVGLVLFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----TCAGDFLDAIVVGVDML 109
+ E+ G +++ L D ++L LP GD DA+ V L
Sbjct: 64 DAED------GNTFYIQTLSS---PDLEFYRNLTELPNHDIPKIIGGDIFDALDKSVSTL 114
Query: 110 IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR---- 165
+Y +T K K + ++T + E +++ + + + +++ I +
Sbjct: 115 -DEYVKTKKMDKKIFVLTAGFGQTE-----YNEKKIAKLIKMIEKVDVKINFIALDFMNE 168
Query: 166 --ASLS--GEPHMRVIIENDNLLN---------IFSK---------KSSAKTLFVDSTTS 203
A L +P + + ND +LN I S+ +S + +
Sbjct: 169 YDAELDDPSKPENQETL-NDRMLNAVYESQEQSINSRLVYYMVQELRSHMRIFPANIAFE 227
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
L T+ + FRGD +++++ I V VYK+ EEK P+LKK+S + + +
Sbjct: 228 LYSQFHTKQMQARASFRGDFQINDETSISVLVYKRCTEEKLPSLKKHSATGEFSSEPTRN 287
Query: 264 EVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTD 322
V+ D + + EDP+ + E IKGY YG ++P+ S + +K++ +S +LLGF D
Sbjct: 288 VVRNDTIHYNPEDPNMTPIERENIIKGYLYGRSLIPVDSIMEDKMKYQCVRSFQLLGFVD 347
Query: 323 ASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S I RHY+M V++ +A +A ++S+L A+ K+AI R V R+ +V V
Sbjct: 348 KSQIPRHYFMSSVDMVVA-IDCEKAKKSLSSLIIALIATKKIAIARFVGREKSSPKMV-V 405
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
L P+ S+ F+ LP +ED+R FQF + K QQ A +L+ +DL
Sbjct: 406 LLPHKSKSYQ---CFWMIALPTSEDIRHFQFAALRK------STPHQQIAVASLIDKMDL 456
Query: 443 A--PSGKG---EILQPELTPNPA 460
P+ G E+L+ + NP
Sbjct: 457 EALPNESGEPEELLKMKYIANPT 479
>gi|294948884|ref|XP_002785943.1| ATP-dependent DNA helicase 2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900051|gb|EER17739.1| ATP-dependent DNA helicase 2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 209/435 (48%), Gaps = 60/435 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEK--------------LCSRLIQKKLIYG-KNHEV 45
MA ++ +LLLDV +M P + IQ+KLI G K+ +V
Sbjct: 1 MASRKKYYVLLLDVGRTMSDTCPSTSQQPQAGRTKMDLAIEAAKLFIQQKLILGGKSTQV 60
Query: 46 GVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT-CAGDFLDAIVV 104
++L G++ T N L + GGY++++V++D+ V D ++ L + G+ D + ++V
Sbjct: 61 ALVLIGSQRTRNRL--QHGGYQNIEVIKDLAVPDIDFLRCLTSIDYGSPYTADVVGGLIV 118
Query: 105 GVDMLIKKYGETYKGK----KHLCLITDALCPLKD----PDVGTKEDQVSTIARQMVAFG 156
+DM+ + T K K + + ++TD P++ P + + ++++ + + FG
Sbjct: 119 ALDMI---HSATEKSKARSQRTVLILTDGCTPVQGAADLPSIVQRMNEIN-VEPIIATFG 174
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ P + ++E+ + ++ + L ++ L +++D +
Sbjct: 175 TPL------------PEVHAVLES-----VAARSEKGQYLQEEALFELLTQVRSKDTQQI 217
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
+ R DLEL++ MKI +W Y KT + PTLKK S + VK+D Y +V+D
Sbjct: 218 SKCRVDLELTKYMKIPIWCYLKTSKVTLPTLKKES-------THTSAAVKMDRVYYAVDD 270
Query: 277 P-SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KD 334
P + +P E+R K Y+YG Q V + ++K+ +K + +LGF + I + +
Sbjct: 271 PDGEAIPAEERAKAYKYGSQFVRFEPYDEASLKYHSDKCLTMLGFARSETIPEELMIGES 330
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 394
+ AEP N A A+S+L +AM M + R +R + V L P++SE+
Sbjct: 331 IECVAAEPNNVDAAKALSSLIKAMDAMGVYMLARYCFRNDVKPKYV-CLAPHISERHT-- 387
Query: 395 DSFYFNVLPFAEDVR 409
Y N LP+++DVR
Sbjct: 388 -CLYMNQLPYSDDVR 401
>gi|405967549|gb|EKC32697.1| ATP-dependent DNA helicase 2 subunit 2 [Crassostrea gigas]
Length = 729
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 239/515 (46%), Gaps = 74/515 (14%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA +EA+ ++LDV PSM++ P E +IQ+K+ EV ++LFGT
Sbjct: 1 MAANKEAIAIVLDVGPSMNNAPPGEETPLQTAVDAIKMIIQRKMFSESKDEVSLVLFGTP 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDFLDAIVVGVDMLIK 111
+T+N L + Y+++ + + + VVD +Q +++ P T A DF+DA+VV +D L+
Sbjct: 61 DTDNPLA-DGDSYDNITISRPLGVVDFDFLQQVQNDITPSNTSA-DFVDALVVALDHLVN 118
Query: 112 K-YGETYKGKKHLCLITDALCPLKD---------------------PDVGTKEDQVSTIA 149
G+ K L L++D D PD+ D+ +
Sbjct: 119 ATQGKKGFAMKRLILLSDLGGEFGDDQIEAIISGIKNSGTELNVIGPDINLDGDEDDDDS 178
Query: 150 RQMVAFGLRMKNIVVRA--SLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRG 206
++ G + R +GE ++ I+E + FS+ A + F
Sbjct: 179 QRPGPSGAANGHQKARTPQQKAGEGMLKRILEEVEGECYSFSEALPALSHF--------- 229
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFATHE 264
+ R + P T ++ LE++ ++I V Y K + K + KK D+ D T
Sbjct: 230 --QMRQVRP-TPWKVQLEITSNIRIPVCSYIKIKDFKVKSFKKVYAKDEDAEIDNLRT-- 284
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
Y ++ V E ++G+RYG +VP+S + +K+K EK +K LGFTDA
Sbjct: 285 ------YHKNDEEETEVEKEDIVEGHRYGTTLVPMSEDDKLNMKYKAEKCLKALGFTDAQ 338
Query: 325 NILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
NI RH++M D + +A+ + A VA+SAL A+ E N +VR V+ + +G L
Sbjct: 339 NIKRHHFMGDNTHYVVADKDDETAVVALSALINALYETNMAVVVRKVY-SAATAPKLGCL 397
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF-----SKFPVSWQPNEQQQEAADNLVK 438
P++ + + LPF ED+R++ F S ++ ++P + Q +A ++L+
Sbjct: 398 LPHIKSSY---ECLIYVELPFREDIRQYTFGSLPLKQDTEANKKYRPTDAQLDAINDLIN 454
Query: 439 MLDLAPSG------KGEILQPELTPNPALEVLNIC 467
DL+ + K E L+P+L NP + L C
Sbjct: 455 ESDLSQAAEDEDGEKTEALKPKLIFNPYFQRLYQC 489
>gi|363736086|ref|XP_422072.3| PREDICTED: X-ray repair cross-complementing protein 5 [Gallus
gallus]
Length = 730
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 235/519 (45%), Gaps = 80/519 (15%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L LDV +M S P E K+ ++ +Q+++ EV V+LFGT
Sbjct: 1 MARGGKSAIVLCLDVGITMSSSAPGEESSLEQAKKVVTKFLQRQVFAESKDEVAVVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+NEL Y+++ V + + + D L++ +++ Q G+ DFLDAI+V +D+L K
Sbjct: 61 DGTKNELASR-DQYQNITVHRSLMLPDFDLLEDIQNRIQLGSQQADFLDAIIVCMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------- 163
+ G+ ++ K+H+ L TD P+ EDQ+ I + G+ ++ +
Sbjct: 120 ETLGKKFE-KRHIELFTDLSSPVS-------EDQLEIIIANLKKTGISLQFFLPFPVDGA 171
Query: 164 -----VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKT 195
AS+ + H M + E L I++ + S +
Sbjct: 172 DGHGDTSASIYSQLHRNSFPRKRLTAQQKEGVDVVKKLMHTLDEEGGLEEIYTFRESLER 231
Query: 196 LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 255
L + R A + L + + I++ YK EEK D
Sbjct: 232 LAMFKKIERRPA----------AWSCQLTIGSNLSIRIVAYKALTEEKVKKTWTVVD--- 278
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KS 314
+V+ + Y +D V + I+G+RYG +VP S + E +K+K E K
Sbjct: 279 -AKTLRKEDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKC 337
Query: 315 VKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
+LGF+ +S I RH YM + L + A + A VA SAL +A+ E+N VAIVR + +
Sbjct: 338 FSVLGFSRSSQIQRHCYMGNQVLKVFAAKDDENAAVAFSALVQALDELNVVAIVRYAYDR 397
Query: 374 GQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 433
+ + +GV P + + + ++ LP+ EDVR++ F S K P Q A
Sbjct: 398 -RCNPQIGVAFPCIKDTY---ECLFYVQLPYMEDVRQYMFSSL-KNNKKCTPTADQLSAI 452
Query: 434 DNLVKMLDLA-PSGKGE----ILQPELTPNPALEVLNIC 467
D+L+ ++L GE + +P PNP + L C
Sbjct: 453 DSLIDSMNLVYEDHNGETFEDLFKPSKIPNPHFQRLYQC 491
>gi|145481675|ref|XP_001426860.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393937|emb|CAK59462.1| unnamed protein product [Paramecium tetraurelia]
Length = 737
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 230/503 (45%), Gaps = 74/503 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDV-EKLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ K SRL IQ+K+ KNHEVG+ILFGTE
Sbjct: 4 KEATLILLDVGASMYGQYQQGGSKKLSRLELAVDCLGLMIQQKIFNYKNHEVGLILFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----TCAGDFLDAIVVGVDML 109
E + T +QD+ + D +++ LP GD DA+ V L
Sbjct: 64 EAPDGKTL---------YIQDLSIPDLDFFRNISDLPNHDVGQQVGGDIFDALDKAVHAL 114
Query: 110 IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 164
+ +T K +K + ++T A C D E Q++ + + + +++ I +
Sbjct: 115 -DDHAKTKKMEKKIFILT-AGCGQTD----YSEKQITKLIKMIEKVDVKINFIALDFMND 168
Query: 165 --------------------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
+ S + + I L + +++ + + L
Sbjct: 169 YNGDMDDPEKPEEFEALNNRMLTASYQCQEQSINSRYVFLMVQELRNNMRIFPANVAFEL 228
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP-STDKFATH 263
TR + FRGD ++++++ ++V +YK+ EE+ PTL+K+S TD H
Sbjct: 229 YSQFHTRSLQARASFRGDFQINDEISVQVLIYKRCFEERLPTLRKHSTLGEFQTDTNKNH 288
Query: 264 EVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTD 322
V+ D Y + EDP+ + + I+GY+YG +VP+ + +K++ + +LLGF D
Sbjct: 289 -VRNDLIYYNPEDPNMTPIEKDNIIRGYQYGRNLVPVDQIMEDKMKYQCPRQFQLLGFVD 347
Query: 323 ASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S+I R+YY V++ IA N + A++AL A+ KVA+ R V R+ ++ +
Sbjct: 348 RSHIPRYYYTSTVDMVIA-VENQKQQKALAALVIALIATRKVALARFVGREKTAPKLI-M 405
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
L P+ S+ F+ LP ED+R FQF + + S P QQ A ++ +DL
Sbjct: 406 LLPHKSKN---SQCFWMISLPTTEDIRHFQFAALKR---STPP---QQMAVSAMIDCMDL 456
Query: 443 --APSGKG---EILQPELTPNPA 460
P+ G E+L+ + NP
Sbjct: 457 EKMPTEDGQFEELLKMKYVANPT 479
>gi|410897090|ref|XP_003962032.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 726
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 241/514 (46%), Gaps = 75/514 (14%)
Query: 1 MARTREALLLLLDVSPSMHSVLP-------DVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
MAR R AL+L +DV SM + P D +K+ + +Q+++ E+G++LFGT+
Sbjct: 1 MARARSALVLCMDVGFSMSNSAPGEEAPFEDAKKIIQKFVQRQVFAESKDELGLVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK 112
T+N L ++ G YE++ V + + V D L++ +++ L D++DA+VV +D+L +
Sbjct: 61 STKNPLHQD-GQYENITVFRQLMVPDFELLEEIQNQLQPENQQADWMDALVVSMDLLQTE 119
Query: 113 YGETYKGKKH----LCLITD------------ALCPLKDPD----------VGTKEDQ-- 144
KGKK+ + L+TD + LK D VG KE+
Sbjct: 120 I----KGKKYDRLNIVLLTDLNIQASSDQLDIIIENLKKADITLQFFLPFPVGDKEESGG 175
Query: 145 ---VSTIARQMVAFGLRMKNIVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDS 200
+S + GL + + L H M + E+D L I++ +++ + L +
Sbjct: 176 DGPISDPGHHGMGKGLSREQ---KEGLDMMKHIMLSLDEDDGLSQIYTFRNAIEQLCMFK 232
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
R P+ + L + + I++ YK +EK K D A S +
Sbjct: 233 QIERR---------PMA-WPCQLTVGSCLSIRIVGYKAVMQEKLKKTWKTVD-AQSNRQE 281
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLG 319
V V Y +D V ++ I+G+RYG +VP S + E +K+K + K +LG
Sbjct: 282 DVKRVTV---YCLDDDNETEVQVDETIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLG 338
Query: 320 FTDASNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
FT + + RH ++ + + +F A+ + A VA+SAL RA+ E+ VAIVR + + + +
Sbjct: 339 FTKQNLVQRHQFIGNQVIKIFAAK-DDEHAGVALSALIRALHELQMVAIVRYAYDR-RCN 396
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
+G P + ++ + + LPF ED+R+F FPS P + Q A D+L+
Sbjct: 397 PQIGAAFPCIKQQY---ECLMYIQLPFMEDLRQFSFPSLENNK-KITPTDAQLTAVDSLI 452
Query: 438 KMLDLAPSGKGE----ILQPELTPNPALEVLNIC 467
+ L G E I +P PNP + L C
Sbjct: 453 DSMMLVEEGDEEKPKDIFKPHHIPNPDFQRLFQC 486
>gi|326922950|ref|XP_003207705.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Meleagris gallopavo]
Length = 796
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 230/512 (44%), Gaps = 79/512 (15%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S P E ++ ++ +Q+++ EV V+LFGT+ T+N L
Sbjct: 33 AIVLCLDVGTTMSSSAPGEESPLEQAKRVMTKFLQRQVFAESKDEVAVVLFGTDGTKNNL 92
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
Y+++ V + + + D L++ ++++ Q GT DFLDAI+V +D+L ++ G+ +
Sbjct: 93 ASR-DQYQNITVHRSLMLPDFDLLEDIQNMIQLGTQQADFLDAIIVCMDLLQQETLGKKF 151
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VR 165
+ K+H+ L TD P+ EDQ+ I + G ++ +
Sbjct: 152 E-KRHIELFTDLSSPVS-------EDQLEIIIANLKKTGTSLQFFLPFPVDGADGRGDAS 203
Query: 166 ASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
AS+ + H M + E L I++ + S + L +
Sbjct: 204 ASIFSQLHQNSFPRKRLTAQQKEGIDVVKKLMHTLDEEGGLEEIYTFRESLERLAMFKKI 263
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
R A + L + + I++ YK EEK + D
Sbjct: 264 ERRSAP----------WSCQLTIGSNLSIRIVAYKALTEEKVKKIWTVVD----AKTLRK 309
Query: 263 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 321
+V+ + Y +D V + I+G+RYG +VP S + E +K+K E K +LGF+
Sbjct: 310 EDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFS 369
Query: 322 DASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+S I RH YM + L + A + A VA SA +A+ E+N VAIVR + + + + +
Sbjct: 370 RSSQIQRHCYMGNHVLKVFAAKDDENAAVAFSAFVQALDELNVVAIVRYAYDR-RCNPQI 428
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
GV P + + + ++ LPF EDVR++ F S K P Q A D+L+ +
Sbjct: 429 GVAFPCIKDAY---ECLFYVQLPFMEDVRQYVFSSL-KNNKKCSPTVDQLSAIDSLIDSM 484
Query: 441 DLA-PSGKGE----ILQPELTPNPALEVLNIC 467
+L GE + +P PNP + L C
Sbjct: 485 NLVYEDDDGETFEDLFKPSKIPNPHFQRLYQC 516
>gi|348519928|ref|XP_003447481.1| PREDICTED: X-ray repair cross-complementing protein 5 [Oreochromis
niloticus]
Length = 723
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 235/503 (46%), Gaps = 64/503 (12%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA ++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+
Sbjct: 1 MAGSKTAVVLCMDVGLTMSNSAPGEESSFELAKKVIQKFVQRQVFSETKIELALVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK 112
T+N L+++ G Y++++V + +++ D L+ +++ Q + GD+LDA+VV +D+L
Sbjct: 61 STDNPLSQD-GQYQNIRVHRHLRIPDCELLIEIENQVQPESKEGDWLDALVVCMDLL--- 116
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV--------- 163
+ ET KGKK+ CL + L D + T E+ + I + G+ M+ +
Sbjct: 117 HTET-KGKKYDCL---NIALLTDLNTQTNEESLEVIINNLTQSGITMQFFLPFPVEEDKE 172
Query: 164 ----VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV----DSTTSLRGARKTRDISP 215
G P + + N+ K +L V D + R A I
Sbjct: 173 GQGDSERRDPGHPGTGKGLSREQKKNMELVKEMMLSLDVEDGLDEIHTFRNA-----IEE 227
Query: 216 VTIFR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
+ +F+ L + + I++ YK +EK P + A S K +V
Sbjct: 228 LCMFKRVERRPVAWPCQLTIGSSLSIRIVGYKAVTDEK-PKKMWITVDAQSHQK---DDV 283
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDAS 324
K + Y +D V + I+G+RYG +VP S + E +K+K + K +LGFT S
Sbjct: 284 KRETVYCLDDDNETEVQKDDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQS 343
Query: 325 NILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
I RH +M L I A + A VA+SAL RA+ E+ VAIVR + + VG
Sbjct: 344 AIHRHQFMGSQILKIFAARDDEHAGVALSALIRALNELQMVAIVRYAYNRTSNP-QVGAA 402
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDL 442
P + + + + LPF ED+R F FPS + P++ Q A D+L+ M+ +
Sbjct: 403 FPCIKQD---SECLMYVQLPFMEDLRHFTFPSLEN--KKFTPSDAQLSAVDSLIDSMMLV 457
Query: 443 APSGKGE---ILQPELTPNPALE 462
GE + +P PNPA +
Sbjct: 458 EEDENGEQRDLFKPHRIPNPAFQ 480
>gi|118379947|ref|XP_001023138.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila]
gi|89304905|gb|EAS02893.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila SB210]
Length = 757
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 218/490 (44%), Gaps = 60/490 (12%)
Query: 5 REALLLLLDVSPSMHSVLPD----------VEKLCSRLI-QKKLIYGKNHEVGVILFGTE 53
+EA ++LLD+ SM L D + C +L+ Q+K+ K HEVG+ILFG +
Sbjct: 4 KEATIILLDMGSSMQQYLGDRGTNGQKRIEIAVNCIKLLLQQKMFNTKTHEVGLILFGLK 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDAIVVGVD----- 107
+ ++ + G DI + VQ LK C GD +AI +D
Sbjct: 64 DEGDDKIMYIRGIGK----PDIDFLKN--VQDLKDYQSDECEGGDIFEAIEQTIDVIHDY 117
Query: 108 -----------MLIKKYGET-YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA- 154
++ +G+T YK K+ + LI A V TK ++ I +
Sbjct: 118 VKEKKYEKKIQLMTAGFGKTSYKEKQIMDLIEKA------RKVQTK---INVIGFDFLKK 168
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR--GARKTRD 212
+ N V + R + N L ++ + + S +++ +TR
Sbjct: 169 YNPEESNTDVLKKDDAAQNTRQNL-NQKLFSVVKDELGEQIQLFPSDVAIKIYEQFRTRQ 227
Query: 213 ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYK 272
++ + F GDL+L+ + I V ++ KT EEK P LK YS + +++ D
Sbjct: 228 VNLRSKFNGDLQLAPNLNIAVQMFTKTSEEKLPGLKMYSLAVDFNPHCESGQIERDVIMA 287
Query: 273 SVEDPS-KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
EDP+ + K Y YG Q++P++ A + + + +K+LGF D+ + R +
Sbjct: 288 LQEDPNLNPIDKSNITKAYHYGKQLIPVTQALEAQMNYTSNRELKVLGFVDSKKVPRQSF 347
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M V++ IA +S A ++AL +M + NK AI R VWR + + VLTP + +
Sbjct: 348 MAGVDIIIANKNDSVAKKGIAALCHSMIQTNKYAIARYVWR-NNGAPKLCVLTPQIGKDY 406
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-EI 450
+ Y +P +E VR+FQF S + ++QQ+ +L+ +DL G E
Sbjct: 407 ---ECLYMCQIPTSESVRDFQFNSLK------ESTKEQQDLMGSLIDKMDLMNLEDGEEA 457
Query: 451 LQPELTPNPA 460
LQ + T NP
Sbjct: 458 LQMKYTFNPT 467
>gi|449506901|ref|XP_002191185.2| PREDICTED: X-ray repair cross-complementing protein 5 [Taeniopygia
guttata]
Length = 879
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 231/500 (46%), Gaps = 58/500 (11%)
Query: 7 ALLLLLDVSPSMHSV-------LPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S L +K+ ++ +Q+++ EV V+LFGT T N+L
Sbjct: 161 AIVLCLDVGFTMSSSSPGEESSLDQAKKIMTKFLQRQVFAESKDEVAVVLFGTNGTRNDL 220
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK-YGETY 117
E Y+++ V + + + D L++ +++ + G+ DFLDAI+V +D+L ++ G+ Y
Sbjct: 221 ASE-DQYQNITVHRSLMLPDFDLLEDIQNVIKAGSEQADFLDAIIVCMDLLQRQTIGKKY 279
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHMRV 176
+ K+H+ L TD P+ EDQ+ I + + ++ + S+ G
Sbjct: 280 E-KRHIELFTDLSSPVS-------EDQLGIIIANLKKTEISLQFFLPFPVSVEGTGDTSA 331
Query: 177 IIENDNLLNIFSKKSSA-----------KTLF-VDSTTSLRGARKTRD-ISPVTIFRG-- 221
+ N F K K ++ +D L R+ + +++F+
Sbjct: 332 SVHAHMHKNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKIE 391
Query: 222 --------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 273
L + + I++ YK EE + D +V+ + Y
Sbjct: 392 RKPMPWPCQLTIGPDLSIRIVAYKSVTEENVKKVWAVVD----AKTLRKEDVQKETVYCL 447
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYM 332
+D V + I+G+RYG +VP S + E +K+K E K +LGFT +S I RHYYM
Sbjct: 448 NDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFTRSSQIQRHYYM 507
Query: 333 KDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
+ L + A G+ A VA SAL RA+ E+ VA+VR + + + + +GV P + +
Sbjct: 508 GNQALKVFAAKGDENAAVAFSALVRALDELKMVAVVRYAYDR-RCNPQIGVAFPYIKDAY 566
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE-- 449
+ + LP+ ED+R++ F S K + P Q A D+L+ ++L GE
Sbjct: 567 ---ECLIYVQLPYMEDLRQYVFSSL-KNSKKYFPTVDQLSAVDSLIDSMNLVHE-DGETF 621
Query: 450 --ILQPELTPNPALEVLNIC 467
+ +P PNP + L C
Sbjct: 622 EDLFKPSKIPNPRFQRLYQC 641
>gi|410969382|ref|XP_003991175.1| PREDICTED: X-ray repair cross-complementing protein 5 [Felis catus]
Length = 1104
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 232/523 (44%), Gaps = 86/523 (16%)
Query: 1 MARTRE--ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+R A++L +DV +M + LP E KL + +Q+++ E+ ++LFG
Sbjct: 1 MARSRSKAAIVLCMDVGSAMSNSLPGEESPFELAKKLMTVFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L + Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTENALAGK-DQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVCMDVIQ 119
Query: 111 KKYGETYKGKKHLCLITDALCPL----------------------------KDPDVGTKE 142
++ GK+H+ + TD P K+ G +
Sbjct: 120 QETVGKKFGKRHIEVFTDLSSPFSQDQLDIIIHNLEKSGISLQFFLPFPVGKEDGTGDRG 179
Query: 143 DQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKS 191
D S + + +F G+RM V+ SL GE D L I+S
Sbjct: 180 DGNSCLDQHGPSFPLKGITEQQKEGIRMVKKVM-MSLEGE---------DGLDEIYS--- 226
Query: 192 SAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYS 251
F +S LR +KT S + L + + IK+ YK +EK K S
Sbjct: 227 -----FSESLRQLRVFKKTERYS--VPWLCTLTIGSNLAIKIVAYKAIMQEKV----KKS 275
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
+++ + Y +D VP E I+G+RYG +VP S + E +++K
Sbjct: 276 WTVVDARTLKKEDIQKETVYCLQDDDETEVPKEDTIQGFRYGSDIVPFSKVDEEQMRYKS 335
Query: 312 E-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
E K +LGF +S + R Y++ + L A + A VA+S+L A+ E++ VA+VR
Sbjct: 336 EGKCFSVLGFCRSSQVHRRYFVGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRY 395
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 429
+ G+ + VG+ P + + + + LPF ED+R++ F S K P E Q
Sbjct: 396 AY-AGRTNPQVGMAFPYIKDAY---ECLMYVQLPFMEDLRQYMFSSL-KNSKKCTPTEAQ 450
Query: 430 QEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
A D L+ + L + E +L PNP + L C
Sbjct: 451 LSAVDALIDSMSLVKKDEKEDTIEDLFPTTKIPNPQHQRLYQC 493
>gi|417404249|gb|JAA48890.1| Putative dna-binding subunit of a dna-dependent protein kinase ku80
autoantigen [Desmodus rotundus]
Length = 732
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 237/516 (45%), Gaps = 72/516 (13%)
Query: 1 MARTRE--ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR++ A++L +DV +M++ P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARSKNKAAVVLCMDVGFTMNNSFPGEESPFEQAKKVITMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L E Y ++ V + + + D +L++ ++ Q G+ DFLDA+VV +D++
Sbjct: 61 TDGTENALACE-DQYRNITVHRHLMLPDFNLLEDIESKIQPGSQQADFLDALVVCMDVIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV---------AFGLR 158
K+ G+ ++ KKH+ + TD P KD D+ + S+I+ Q G R
Sbjct: 120 KETVGKKFE-KKHIEVFTDLSSPFSKDQLDIIIHNLRTSSISLQFFLPFPVGKEDGTGDR 178
Query: 159 MKNIVVRASLSGEPH-------------------MRVIIENDNLLNIFSKKSSAKTLFVD 199
+ +R+ G P M + D L I+S S + L V
Sbjct: 179 -GDSNLRSDHPGSPFPLKGITEQQKEGVQMVKRVMTALEGEDGLDEIYSFSESLRQLCV- 236
Query: 200 STTSLRGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ I +I +R L + + I++ YK +E+ + S
Sbjct: 237 ----------FKKIERSSIPWRCQLTIGSNLSIEISAYKSIVQERI----RASWTVVDAR 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLRKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDQEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R Y+M V A + A VA+S+L A+ E++ VAIVR + + +
Sbjct: 343 LGFCRSSQVHRKYFMGSQVLKVFAAKDDEAAAVALSSLTHALDELDMVAIVRYAYDR-RS 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P + + + + LPF ED+R++ FPS K + P E Q A D L
Sbjct: 402 NPQVGVAFPCIKDTY---ECLVYVQLPFMEDLRQYMFPSL-KNNKKYTPTEAQLSAVDAL 457
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ ++L + E +L PNP + L C
Sbjct: 458 IDSMNLTKKDEEEDTIEDLFPTTKIPNPQFQRLFQC 493
>gi|327282822|ref|XP_003226141.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Anolis
carolinensis]
Length = 748
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 234/518 (45%), Gaps = 79/518 (15%)
Query: 1 MARTREALLLLLDVSPSM-HSVLPD------VEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
M R + A++L +DV SM HS L + +K+ + +Q+++ E+ ++LFGTE
Sbjct: 1 MWRAKSAVVLCMDVGFSMSHSGLGEESPFEQAKKVITVFVQRQVFAESKDEISLVLFGTE 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDAIVVGVDMLIKK 112
T N L E Y+H+ V + + + D L++ ++++ Q T GD LDA++V +D+L ++
Sbjct: 61 NTANSLASE-DQYQHIAVHRHLMLPDFDLLEDIQNVIQPTSEQGDILDALIVSMDLLQRE 119
Query: 113 -YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK----------- 160
G+ Y+ K H+ + TD P EDQ+ I + G+ ++
Sbjct: 120 TVGKKYE-KLHIEVFTDLGSPFS-------EDQLDVIIANLKKTGISLQFFLPFPMNDEG 171
Query: 161 ---------------NIVVRASLSGEPH---------MRVIIENDNLLNIFSKKSSAKTL 196
N R LS + M + + D L I++ + S + L
Sbjct: 172 GSGDKTDCAHSHKPQNSFPRKGLSEQQKEGLKMVRKLMVSLDKEDGLEEIYTFRESLEQL 231
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ R P+ + L + K+ IK+ YK EEK T K +
Sbjct: 232 SMFKKVERR---------PMP-WPCQLTIGSKLSIKIVAYKSFTEEK--TKKSWIVVDAK 279
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
T K +++ + Y +D V E I+G+RYG +++P S + E +K+K + K
Sbjct: 280 TSK--KDDLQKETVYCLNDDDETEVQKEDVIQGFRYGSEIIPFSKVDEEQMKYKTDGKCF 337
Query: 316 KLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF+ AS +LRH YM V A + A VA+S+L A+ E++ VAIVR V+ +
Sbjct: 338 AVLGFSKASQVLRHRYMGHQVLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYVYDRR 397
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
Q VG P + N + + LP+ ED+R++ F S K P E Q A D
Sbjct: 398 SQP-QVGAAFPLIK---NEYECLAYVQLPYMEDLRQYMFSSL-KNNKKCTPTEDQLLAVD 452
Query: 435 NLVKMLDLAPSGKGE-----ILQPELTPNPALEVLNIC 467
+L+ + L + E + PNP + L C
Sbjct: 453 SLIDSMSLVYEDESEGTVEDTFKTSKFPNPQFQRLYQC 490
>gi|432932472|ref|XP_004081756.1| PREDICTED: X-ray repair cross-complementing protein 5 [Oryzias
latipes]
Length = 725
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 236/506 (46%), Gaps = 69/506 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA + AL+L +DV SM + P E K+ + +Q+++ EV ++LFGT+
Sbjct: 1 MASAKSALVLCMDVGFSMSNSGPGEESPFDLSKKVIQKFVQRQVFAETKDEVALVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIK 111
T+N L ++ Y+++ V + + V D L++ ++H P+G A D+LDA+VV +D+L K
Sbjct: 61 ATKNPLEQD-EQYQNIVVHRHLMVPDFDLLEEIEHQIHPEGQQA-DWLDALVVCMDLLQK 118
Query: 112 KYGETYKGKKHLCLITDALC----------------------------PLKDPDVGTKED 143
+ + ++ L+TD LC P++D + G +
Sbjct: 119 ETQGKKCDRLNIVLLTD-LCTQVSPDKLEVIIENLKQADITLQFFLPFPVEDAEEGQGDG 177
Query: 144 QVSTIARQMVAFGLRMKNIVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
+ GL + ++ L H M + E D L +++ +++ + L +
Sbjct: 178 EQRDPGHPGAGKGLSREQ---QSGLEMVKHIMLSLDEEDGLNEVYTFRNAIEQLCM---- 230
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
K D P+ + L + + I++ YK EEK + D A S +
Sbjct: 231 -----FKRIDRRPMA-WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVD-AQSNQR--- 280
Query: 263 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 321
+VK + Y +D V E I+G+RYG +VP S + E +K+K + KS +LGFT
Sbjct: 281 EDVKKETVYCLDDDNETEVQKEDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKSFAVLGFT 340
Query: 322 DASNILRHYYMKDVNLFIAEP-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ +LRH +M + I P + A VA+SAL R + E+ VAIVR + + + + V
Sbjct: 341 KQNLVLRHQFMGSQVVKIFPPKDDEHAGVALSALIRGLDELKMVAIVRYAYDR-RSNPQV 399
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KM 439
G P + + + + LPF ED+R F FPS P+E Q A D+L+ M
Sbjct: 400 GAAFPCIKQTY---ECLIYVQLPFMEDLRPFAFPSLENNK-KICPSETQLSAVDSLIDSM 455
Query: 440 LDLAPSGKGE---ILQPELTPNPALE 462
+ + GE +L+P PNPA +
Sbjct: 456 MLIEKDENGELIDLLKPHHIPNPAFQ 481
>gi|148228702|ref|NP_001081127.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Xenopus laevis]
gi|50415233|gb|AAH77439.1| Xrcc5-A-prov protein [Xenopus laevis]
Length = 726
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 231/509 (45%), Gaps = 61/509 (11%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+L+GT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGKESPFEQAKKVMMLFLQRQVFAESKDEIAVVLYGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L +E YE++ V + + + D L++ ++++ + G+ DFLDA++V +D+L K
Sbjct: 61 DTTDNALARE-DQYENISVHRHLMLPDFDLLEQIENVVEPGSVQADFLDALIVSMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
+ G+ Y + H+ + +D P V E ++ + + + + V G
Sbjct: 120 ETLGKKYT-RLHIAVFSDLSSPFS---VDQLEVIIANLKKAEITLQFFLPFSVDEEEFGG 175
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT-------RDISPVTIFRGDL 223
+ R N + K L + RK +S V FR L
Sbjct: 176 SSNNR-----GNAGSSDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSL 230
Query: 224 E--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
E + + I++ YK EEK K ++ T K
Sbjct: 231 ERLSIFKKIERRPMPWPCQLTVGSSLSIRIVGYKSVTEEKVK--KTWTHIDAKTHK--KE 286
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
++K + Y D V + I+G+RYG +VP S + E +K+K E K +LGFT
Sbjct: 287 DIKKETVYCLNNDEETEVEKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKCFAVLGFTK 346
Query: 323 ASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S +L + ++ + + + P + A+VA+SAL A+ EM+ VAIVR V+ + + + VG
Sbjct: 347 SSMVLSNQFVGNQVIRMFAPSDDEAASVALSALIHALDEMDMVAIVRYVYDR-RSNPQVG 405
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ +K + + LPF ED+R++ F S K + P E Q A D+L+ +
Sbjct: 406 VAFPHIKDKY---ECLVYVQLPFMEDIRQYLFSSL-KNNKKFTPTESQNSAIDSLIDSMS 461
Query: 442 LA---PSGKGEILQPELTPNPALEVLNIC 467
L K ++ + PNP + L C
Sbjct: 462 LIYDDGETKEDLFKTSKLPNPQFQRLFQC 490
>gi|4630799|dbj|BAA76954.1| human Ku80 autoantigen homologue [Xenopus laevis]
Length = 726
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 231/509 (45%), Gaps = 61/509 (11%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+L+GT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGKESPFEQAKKVMMLFLQRQVFAESKDEIAVVLYGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L +E YE++ V + + + D L++ ++++ + G+ DFLDA++V +D+L K
Sbjct: 61 DTTDNALARE-DQYENISVHRHLMLPDFDLLEQIENVVEPGSVQADFLDALIVSMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
+ G+ Y + H+ + +D P V E ++ + + + + V G
Sbjct: 120 ETLGKKYT-RLHIAVFSDLSSPFS---VNQLEVIIANLKKAEITLQFFLPFSVDEEEFGG 175
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT-------RDISPVTIFRGDL 223
+ R N + K L + RK +S V FR L
Sbjct: 176 SSNNR-----GNAGSSDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSL 230
Query: 224 E--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
E + + I++ YK EEK K ++ T K
Sbjct: 231 ERLSIFKKIERRPIPWPFQLTVGSSLSIRIVGYKSVTEEKVK--KTWTHIDAKTHK--KG 286
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
++K + Y D V + I+G+RYG +VP S + E +K+K E K +LGFT
Sbjct: 287 DIKKETVYCLNNDEETEVEKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKCFAVLGFTK 346
Query: 323 ASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S +L + ++ + + + P + A+VA+SAL A+ EM+ VAIVR V+ + + + VG
Sbjct: 347 SSMVLSNQFVGNQVIRMFAPSDDEAASVALSALIHALDEMDMVAIVRYVYDR-RSNPQVG 405
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ +K + + LPF ED+R++ F S K + P E Q A D+L+ +
Sbjct: 406 VAFPHIKDKY---ECLVYVQLPFMEDIRQYLFSSL-KNNKKFTPTESQNSAIDSLIDSMS 461
Query: 442 LA---PSGKGEILQPELTPNPALEVLNIC 467
L K ++ + PNP + L C
Sbjct: 462 LIYDDGETKEDLFKTSKLPNPQFQRLFQC 490
>gi|5733688|gb|AAD49720.1|AF166486_1 Ku autoantigen [Mus musculus]
Length = 732
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ +
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQHETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYFFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K + P E Q A D+L+ + L +
Sbjct: 413 KDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNMKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQC 493
>gi|160333605|ref|NP_033559.2| X-ray repair cross-complementing protein 5 [Mus musculus]
gi|166900095|sp|P27641.4|XRCC5_MOUSE RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit;
AltName: Full=CTC box-binding factor 85 kDa subunit;
Short=CTC85; Short=CTCBF; AltName: Full=DNA repair
protein XRCC5; AltName: Full=Ku autoantigen protein p86
homolog; AltName: Full=Ku80; AltName: Full=Nuclear
factor IV
gi|30354225|gb|AAH51660.1| Xrcc5 protein [Mus musculus]
gi|74223179|dbj|BAE40726.1| unnamed protein product [Mus musculus]
gi|148667865|gb|EDL00282.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Mus musculus]
Length = 732
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQC 493
>gi|74146893|dbj|BAE41402.1| unnamed protein product [Mus musculus]
Length = 708
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 R----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQC 493
>gi|74191169|dbj|BAE39415.1| unnamed protein product [Mus musculus]
Length = 732
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQC 493
>gi|301625724|ref|XP_002942054.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Xenopus (Silurana) tropicalis]
Length = 712
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 236/516 (45%), Gaps = 75/516 (14%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+LFGT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGEESPFEQAKKVMMLFLQRQVFAESKDEIAVVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L + YE++ V + + + D L++ ++++ + G+ DFLDA++V +D+L K
Sbjct: 61 DTTDNALARG-DQYENISVHRHLMLPDFDLLEQIQNVVEPGSTQADFLDALIVSMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---VRAS 167
+ G+ Y+ + H+ + +D P DQ+ I + G+ ++ + V
Sbjct: 120 ETLGKKYE-RLHIAVFSDLSSPFS-------VDQLEVIIANLKKAGISLQFFLPFPVEEE 171
Query: 168 LSGEPHMRVIIENDNLLNIFSK---KSSAKTLFVDSTTSLRGARKTR-------DISPVT 217
+G+ ++N + S + K L + RK +S V
Sbjct: 172 EAGDS-------SNNRGDSGSSDRGRGPGKGLSDQQKEGIEMVRKIMFSLDGEDGLSEVF 224
Query: 218 IFRGDLE--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
FR LE + + I++ YK EEK + D A S
Sbjct: 225 TFRESLERLSIFKKIERRPMAWPCQLTIGSGLSIRIVGYKSVTEEKVKKTWAHVD-AKSN 283
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVK 316
K ++K + Y D V E I+GYRYG +VP S + E +K++ E K
Sbjct: 284 KK---EDIKKETVYCLNNDEETEVEKEDTIQGYRYGSDIVPFSKVDQEQMKYRSEGKCFA 340
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
+LGFT +S + H ++ + + I P + A+VA+S+L A+ EM+ VAIVR V+ + +
Sbjct: 341 VLGFTKSSLVPSHQFVGNQVVKIFAPSDDEAASVALSSLIHALDEMDMVAIVRYVYDR-R 399
Query: 376 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 435
+ VGV P + +K + + LPF ED+R+ F S K + P + Q A D+
Sbjct: 400 CNPQVGVAFPRIKDKY---ECLVYIQLPFMEDLRQHLFSSL-KNSKKFTPTDSQLSAMDS 455
Query: 436 LVKMLDLAPSGKGE----ILQPELTPNPALEVLNIC 467
L+ + L S GE + +P PNP + L C
Sbjct: 456 LIGSMSLV-SDDGETTEDLFKPSKIPNPQFQRLFQC 490
>gi|22137748|gb|AAH29218.1| Xrcc5 protein, partial [Mus musculus]
Length = 731
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 5 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 64
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 65 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 123
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 124 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 176
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 177 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 236
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 292
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 293 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 352
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 353 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 411
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 412 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 467
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 468 EEDIVEDLFPTSKIPNPEFQRLYQC 492
>gi|74224988|dbj|BAE38207.1| unnamed protein product [Mus musculus]
Length = 732
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLGSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQC 493
>gi|47226323|emb|CAG09291.1| unnamed protein product [Tetraodon nigroviridis]
Length = 727
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 233/507 (45%), Gaps = 76/507 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ AL+L +DV SM + P E K+ + +Q+++ E+G++LFGT+ T N
Sbjct: 1 QSALMLCMDVGFSMSNSAPGEEPPFELAKKIIQKFVQRQVFAESKDELGLVLFGTDSTNN 60
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKKYGET 116
L ++ G YE++ V +++ V D L++ +++ L D++DA+VV +D+L +
Sbjct: 61 LLHQD-GQYENISVFRELSVPDFDLLEQIQNQLQPENQQADWMDALVVCMDLLQR----A 115
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------- 163
GKK+ L + L D ++ DQ+ I + + + + ++ +
Sbjct: 116 RTGKKYDRL---NIVQLTDLNIQASSDQLDIIIQNLKSSDITLQFFLPFPAEDDEDGGGD 172
Query: 164 VRASLSGEPH-------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
S SG P M + E+D L I++ +++ + L +
Sbjct: 173 GPRSESGHPGRGKGLSRDQKEGLDMMKHIMLSLDEDDGLDQIYTFRNAIEQLRMFKQIER 232
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
R P+ + L + + I++ YK +EK D + +
Sbjct: 233 R---------PMA-WPCLLTVGSCVSIRIVGYKAVMQEKLKKTWMTVDAQTNQKEV---- 278
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
+K + Y +D V + I+G+RYG +VP S + E +K+K + K +LGFT
Sbjct: 279 IKRETVYCLDDDNETEVQVTETIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQ 338
Query: 324 SNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+ + RH ++ + + LF A+ + A VA+SAL RA++E+ VAIVR + + + + VG
Sbjct: 339 NLVHRHQFIGNQVIKLFAAK-DDEHAGVALSALIRALRELEMVAIVRYAYDR-RSNPQVG 396
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
P + + + + LPF ED+R+F FPSF V+ P E Q A D+L+ +
Sbjct: 397 AAFPCIKQHY---ECLMYIQLPFVEDLRQFSFPSFDNKKVT--PTETQLSAVDSLIDSMM 451
Query: 442 LAPSGKG----EILQPELTPNPALEVL 464
L G ++ + PNP + L
Sbjct: 452 LVEEGDDGKPKDMFKVHHIPNPEFQRL 478
>gi|378729781|gb|EHY56240.1| ATP-dependent DNA helicase 2 subunit 2 [Exophiala dermatitidis
NIH/UT8656]
Length = 697
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 186/393 (47%), Gaps = 25/393 (6%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K ++GV+ GT+ET N++ + Y ++ VLQ I + +Q+L L P T D
Sbjct: 48 KTLQIGVVGLGTDETSNDMMDQDDSYRNISVLQRISQILMPELQALPELLRPSHTDDRDV 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ I++ DM++K + + K KK + +IT+A + D D+G + ++V G+
Sbjct: 108 VSGIIIAGDMIMK-HCKNLKYKKRIVVITNANGYIDDDDIGNTAEHFKNHGIELVILGID 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ G+P + + N+ L + S + + + P
Sbjct: 167 FDDPEYGFKEEGKPPQK--MHNEQTLQKLADLSGGIVGTMQEAIDELSRPHIKPVRPTPT 224
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKA--PSTDKFAT-HEVKVDY 269
++G L+L + + I V Y KT ++ PT Y+ + PS + +T H + Y
Sbjct: 225 YKGLLKLGDPENYDTALCIDVERYFKTSIKRPPTASAYAVRPEDPSDENLSTVHNL---Y 281
Query: 270 EYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
+YK ++ S + V E+ KG+ YG V IS +E K + +LGF N
Sbjct: 282 KYKVKDEESGGGTRDVDREELAKGFEYGRTAVAISESEQNITKLETYSGYDILGFIPVDN 341
Query: 326 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
+ R+ + + ++ +A+ GN +A +A+S+L A+ E+ VA+ R V + + ++ +L+P
Sbjct: 342 VERYMMLDNSSMIVAQKGNDKAAIALSSLVHALYEVRSVAVGRLVKKDMTEPIIT-LLSP 400
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
+ + N+LPFAEDVR ++FP +
Sbjct: 401 FAEQDF---ECLIENILPFAEDVRTYRFPPLHR 430
>gi|26349273|dbj|BAC38276.1| unnamed protein product [Mus musculus]
Length = 708
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 227/505 (44%), Gaps = 58/505 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 R----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 K---GAYECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALEVLNIC 467
E + +L PNP + L C
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQC 493
>gi|345797322|ref|XP_536061.3| PREDICTED: X-ray repair cross-complementing protein 5 [Canis lupus
familiaris]
Length = 829
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 232/518 (44%), Gaps = 80/518 (15%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEE 54
+R++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+
Sbjct: 100 SRSKAAVVLCMDVGSAMGNSFPGEESPFELAKKVITMFVQRQVFAESRDEIALVLFGTDG 159
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
TEN L + Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++
Sbjct: 160 TENALAGK-DQYQNITVHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQQET 218
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVRASL 168
G+ ++ K+H+ + TD P +DQ+ I + FG+ ++ + +
Sbjct: 219 VGKKFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPIGKEDG 270
Query: 169 SGEPH--------------------------------MRVIIENDNLLNIFSKKSSAKTL 196
+G+P MR + D L I+S S + L
Sbjct: 271 TGDPGDGNSRSDHQGSSFPLKGITEQQKEGIRMVKKVMRSLEGEDGLDEIYSFSESLRQL 330
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
V + K P T L + + IK+ YK +EK K
Sbjct: 331 CV-----FKKIEKHSIPWPCT-----LTIGSSLSIKIVAYKSIIQEKV----KKGWTVVD 376
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
+++ + Y +D VP E I+G+RYG +VP S + E +K+K E K
Sbjct: 377 ARTLKKEDLQKETVYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKLEGKCF 436
Query: 316 KLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF +S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR + +
Sbjct: 437 SVLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDR- 495
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ VG+ P + ++ + + LPF ED+R++ F SF K P E Q A D
Sbjct: 496 RSHPQVGMAFPFIK---DVYECLIYVQLPFMEDLRQYMFSSF-KNNKKCTPTEAQLSAVD 551
Query: 435 NLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
L+ + L + + +L PNP + L C
Sbjct: 552 ALIDSMSLIKKDEKDDTIEDLFPTSKIPNPQFQRLFQC 589
>gi|297722715|ref|NP_001173721.1| Os03g0856200 [Oryza sativa Japonica Group]
gi|255675060|dbj|BAH92449.1| Os03g0856200 [Oryza sativa Japonica Group]
Length = 97
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 77/97 (79%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
KE+GGY+HV V +DIKVVD +L++LP+GT GD
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGD 97
>gi|301755794|ref|XP_002913725.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Ailuropoda melanoleuca]
Length = 733
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 234/525 (44%), Gaps = 90/525 (17%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV P+M + L E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARSGSKAAVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFG 60
Query: 52 TEETENELTKEVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVD 107
T+ TEN L GG Y+++ V + + + D L++ ++ Q + DFLDA+VV +D
Sbjct: 61 TDGTENAL----GGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMD 116
Query: 108 MLIKK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV--- 163
M+ ++ G+ ++ KKH+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 117 MIQRETVGKKFE-KKHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFP 168
Query: 164 ------VRASLSGEPH---------MRVIIEN------------------DNLLNIFSKK 190
G H ++ I E D L I+S
Sbjct: 169 VGKEDGTGDRGDGNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFS 228
Query: 191 SSAKTLFVDSTTSLRGARKTRDIS-PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 249
S + L V +TR + P T L + + I + YK +E+ K
Sbjct: 229 ESLRQLCVFKKI------ETRSVPWPCT-----LTIGSNLSINIVAYKSIVQERV----K 273
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
S +++ + Y +D VP E I+G+RYG +VP S + E +K+
Sbjct: 274 KSWTVVDAQTLKKEDLQKETIYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKY 333
Query: 310 KPE-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIV 367
K E K +LGF +S + R Y+M + L + A + A VA+S+L A+ E+ VA+V
Sbjct: 334 KSEGKCFSVLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAVV 393
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
R V+ + + + VG+ P + + + + LPF ED+R++ F S K + P E
Sbjct: 394 RYVYDR-RANPQVGMAFPYIKDAY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTE 448
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
Q A D L+ + L + E +L PNP + L C
Sbjct: 449 AQLSAVDALIDSMSLVKKDEKEDTIEDLFPTSKIPNPQFQRLFQC 493
>gi|449275319|gb|EMC84191.1| ATP-dependent DNA helicase 2 subunit 2, partial [Columba livia]
Length = 730
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 229/512 (44%), Gaps = 79/512 (15%)
Query: 7 ALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S L +K+ ++ +Q+++ EV V+LFGT+ T N L
Sbjct: 1 AIVLCLDVGCAMSNSASGEESSLEQAKKVMTKFVQRQVFAETKDEVAVVLFGTDGTRNAL 60
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
Y+++ V + + + D L++ ++ + + G+ DFLDAI+V +D+L K+ G+ Y
Sbjct: 61 ASR-DQYQNITVHRSLMLPDFDLLEDIQDVIKPGSEQADFLDAIIVCMDLLQKETIGKKY 119
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VR 165
+ K+H+ L TD P+ EDQ+ I + G+ ++ +
Sbjct: 120 E-KRHIELFTDLSSPVS-------EDQLDIIIANLKKTGISLQFFLPFPVDDDDGGGDKS 171
Query: 166 ASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
AS+ + H M + E L I++ + S + L +
Sbjct: 172 ASVCSQMHRNSFPRKGLTEQQKEGIDVVRKLMHTLDEEGGLEEIYTFRESLERL----SM 227
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
+ RK+ + L + + I++ YK EEK + D
Sbjct: 228 FKKIERKS------LPWPCQLTIGSNLSIRIVAYKSVIEEKVKKVWTVVD----AKTLRK 277
Query: 263 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 321
+++ + Y +D V + I+G+RYG +VP S + E +K+K E K +LGF+
Sbjct: 278 EDIQKETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFS 337
Query: 322 DASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+S I R YYM + L + A + A VA SAL A+ E+ VAIVR + + + + +
Sbjct: 338 RSSQIQRQYYMGNQVLKVFAAKDDENAAVAFSALVHALDELKVVAIVRYAYDR-RCNPQI 396
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
GV P + + + + LP+ ED+R + F S K P Q A D+L+ +
Sbjct: 397 GVAFPYIKDAY---ECLIYVQLPYMEDLRPYIFSSL-KNNKKCTPTVDQLSAVDSLIDSM 452
Query: 441 DL-APSGKGE----ILQPELTPNPALEVLNIC 467
+L + GE + +P PNP + L C
Sbjct: 453 NLVSEDDDGETFEDLFKPSKIPNPHFQRLYQC 484
>gi|156371370|ref|XP_001628737.1| predicted protein [Nematostella vectensis]
gi|156215721|gb|EDO36674.1| predicted protein [Nematostella vectensis]
Length = 483
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 12/234 (5%)
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEK + KK S A ++ + EV ++ Y ++ + E +GYRYG +VP++
Sbjct: 65 EEKLASWKKLSAIAQASPNSDSMEVTMERTYHRNDEDQTEIEKENVAQGYRYGKTIVPLT 124
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMK 359
+ E +K + EK + +LGF+ NI RH+Y+ ++V F A+P + A++A+SA AM
Sbjct: 125 KIDKEGMKLETEKCLSVLGFSHKDNIKRHHYIGENVTAFTAQPEDEHASIALSAFINAMH 184
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
+ VAIVR +R+ + +G L+P++ E+ + F LPFAED+R F F S
Sbjct: 185 RSDTVAIVRYCFRKN-AAPKLGFLSPHIKEEY---ECLLFTALPFAEDLRHFSFASLDGN 240
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALEVLNIC 467
QP E Q A D+L+ ++DL+ + + E L+P+ T NP + + C
Sbjct: 241 K-KLQPTEDQLRAIDDLITVMDLSKAQRDEYGEATEALKPKCTFNPTRQRVFQC 293
>gi|149015962|gb|EDL75243.1| X-ray repair complementing defective repair in Chinese hamster
cells 5, isoform CRA_a [Rattus norvegicus]
Length = 732
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 224/515 (43%), Gaps = 78/515 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQVST 147
GKKH+ + TD +C LK + G ED S+
Sbjct: 125 KKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSSISLQFFLPFPIDKNGEPGETEDHDSS 184
Query: 148 IARQMVAF---GLRMK-----NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 199
+F GL + ++V R LS E D L I+S S + L +
Sbjct: 185 FDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEG-------KDGLDEIYSFSESLQQLCIF 237
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + I++ YK +EKF K S
Sbjct: 238 KKIERRSLP----------WPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVDART 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + + +
Sbjct: 344 GFCKSSQVHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P + + + + LPF ED+R++ F S K P E Q A D+L+
Sbjct: 403 PQVGVAFPFIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLI 458
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ L + E + +L PNP + L C
Sbjct: 459 DSMSLVKKNEEEDIIEDLFPTSKIPNPEFQRLYQC 493
>gi|41056215|ref|NP_803154.1| X-ray repair cross-complementing protein 5 [Rattus norvegicus]
gi|38181957|gb|AAH61576.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Rattus norvegicus]
Length = 732
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 224/515 (43%), Gaps = 78/515 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQVST 147
GKKH+ + TD +C LK + G ED S+
Sbjct: 125 KKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSGISLQFFLPFPIDKNGEPGETEDHDSS 184
Query: 148 IARQMVAF---GLRMK-----NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 199
+F GL + ++V R LS E D L I+S S + L +
Sbjct: 185 FDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEG-------KDGLDEIYSFSESLQQLCIF 237
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + I++ YK +EKF K S
Sbjct: 238 KKIERRSLP----------WPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVDART 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + + +
Sbjct: 344 GFCKSSQVHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P + + + + LPF ED+R++ F S K P E Q A D+L+
Sbjct: 403 PQVGVAFPFIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLI 458
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ L + E + +L PNP + L C
Sbjct: 459 DSMSLVKKNEEEDIIEDLFPTSKIPNPEFQRLYQC 493
>gi|335303363|ref|XP_003133697.2| PREDICTED: X-ray repair cross-complementing protein 5 [Sus scrofa]
Length = 733
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 235/511 (45%), Gaps = 62/511 (12%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARWGNKAAVVLCVDVGFAMSNSFPGEESPFELAKKVITMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L + Y+++ V + +K+ D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTENALAGK-DQYQNITVHRHLKLPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVR 165
++ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ V +
Sbjct: 120 QETIGKKFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPVGK 171
Query: 166 ASLSGEPHMRVIIENDN-----LLNIFSKKSSAKTLFVDSTTSLRGARKTRDI------- 213
+G+ + + + L I ++ + SL G +I
Sbjct: 172 EDGTGDRGDSSLRPDHHGPSFPLKGITEQQKEGIQMVKKVMMSLEGEDGLDEIYSFSESL 231
Query: 214 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ IF+ L + + I++ YK +EK K S A
Sbjct: 232 RQLCIFKKIEKHSMPWPCQLTIGSNLSIRIVAYKSILQEKV----KQSWTAVDARTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +LGF
Sbjct: 288 DIRKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCR 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR + + + + VG
Sbjct: 348 SSQVHRKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDK-KANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P + + + + LPF ED+R++ F S K P E Q A D+L+ +
Sbjct: 407 VAFPYIKDAY---ECLVYIQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAVDSLIDSMC 462
Query: 442 LA----PSGKGEILQPEL-TPNPALEVLNIC 467
L G E L P + PNP + L C
Sbjct: 463 LVKKDEEEGTVEDLFPTVKIPNPQFQRLFQC 493
>gi|281340246|gb|EFB15830.1| hypothetical protein PANDA_001572 [Ailuropoda melanoleuca]
Length = 680
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 225/516 (43%), Gaps = 86/516 (16%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV P+M + L E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 2 AVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFGTDGTENAL 61
Query: 60 TKEVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
GG Y+++ V + + + D L++ ++ Q + DFLDA+VV +DM+ ++
Sbjct: 62 ----GGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMDMIQRETVG 117
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---------VRA 166
KKH+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 118 KKFEKKHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGD 170
Query: 167 SLSGEPH---------MRVIIEN------------------DNLLNIFSKKSSAKTLFVD 199
G H ++ I E D L I+S S + L V
Sbjct: 171 RGDGNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFSESLRQLCVF 230
Query: 200 STTSLRGARKTRDIS-PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+TR + P T L + + I + YK +E+ K S
Sbjct: 231 KKI------ETRSVPWPCT-----LTIGSNLSINIVAYKSIVQERV----KKSWTVVDAQ 275
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D VP E I+G+RYG +VP S + E +K+K E K +
Sbjct: 276 TLKKEDLQKETIYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKSEGKCFSV 335
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R Y+M + L + A + A VA+S+L A+ E+ VA+VR V+ + +
Sbjct: 336 LGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAVVRYVYDR-RA 394
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VG+ P + + + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 395 NPQVGMAFPYIKDAY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTEAQLSAVDAL 450
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ + L + E +L PNP + L C
Sbjct: 451 IDSMSLVKKDEKEDTIEDLFPTSKIPNPQFQRLFQC 486
>gi|432103389|gb|ELK30494.1| X-ray repair cross-complementing protein 5 [Myotis davidii]
Length = 763
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 229/516 (44%), Gaps = 86/516 (16%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 16 AVVLCMDVGFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFGTDGTENAL 75
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
E Y+++ V + + + D +L++ ++ Q G+ DFLDA++V +D++ ++ G+ +
Sbjct: 76 ACE-DQYQNITVHRHLMLPDFNLLEDIESKIQPGSQQADFLDALIVCMDVIQQETVGKKF 134
Query: 118 KGKKHLCLITDALCPL----------------------------KDPDVGTKEDQVSTIA 149
+ K+H+ + TD P K+ G + D +
Sbjct: 135 E-KRHIEVFTDLSSPFSKDQLDTIIHNLKKSNISLQFFLPFPIGKEDGTGDRGDGNLPLD 193
Query: 150 RQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
+F G+RM V+ SL GE D L I+S S + L V
Sbjct: 194 NHGPSFPLKGITEQQKEGIRMVKRVM-MSLEGE---------DGLDEIYSFSESLRQLCV 243
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
T R P + L + + IK+ YK +EK K S
Sbjct: 244 FKKTE-------RSSMP---WPCQLTIGSNLSIKILAYKSVLQEKV----KKSWIVVDAR 289
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+V+ + Y +D VP E I+G+RYG ++P S + E +K+K E K +
Sbjct: 290 TLKKEDVQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 349
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R Y+M + L + A + A VA+S+L A+ E+ VAIVR + + +
Sbjct: 350 LGFCRSSQVHRKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAIVRYAYDR-RS 408
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 409 NPQVGVAFPHIKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLNAVDAL 464
Query: 437 VKMLDLAPSG-KGEILQPEL----TPNPALEVLNIC 467
+ + L +G+ ++ PNP + L C
Sbjct: 465 IDSMSLVKKDEEGDTIEDLFPTTKIPNPQFQRLFQC 500
>gi|1110531|gb|AAC52664.1| autoantigen Ku86 [Mesocricetus auratus]
Length = 732
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 220/515 (42%), Gaps = 78/515 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ TE
Sbjct: 6 NKAAVVLCMDVGIAMGNSFPGEESPFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDSTE 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L E Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++
Sbjct: 66 NALASE-DQYQNITVRRHLMLPDFDLLEDIESKIQLGSRQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM---------KNIVVRA 166
GKKH+ + TD P +DQ+ I + G+ + KN
Sbjct: 125 KKFGKKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNNETGH 177
Query: 167 SLSGEPHM------------------------RVIIE---NDNLLNIFSKKSSAKTLFVD 199
S G+ + RV++ D L I+S S + L V
Sbjct: 178 SGDGDLGLDHRGPSFPQKGVTEQQKEGIRMVERVMVSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + IK+ YK +EK D
Sbjct: 238 KKIERRSMP----------WPCQLTIGPDLSIKIVAYKSIVQEKLKKTWVVVD----ART 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + + +
Sbjct: 344 GFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYTYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P + + + + LPF ED+R++ F S K P E Q A D+L+
Sbjct: 403 PQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLI 458
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ + L + E +L PNP + C
Sbjct: 459 ESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQC 493
>gi|281203244|gb|EFA77444.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 699
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 214/488 (43%), Gaps = 75/488 (15%)
Query: 4 TREALLLLLDVSPSMH---------SVLPDVEKLCSR--LIQKKLIYGKNHEVGVILFGT 52
T+EAL+++LD+ MH + P E L S L Q+KL+YGK E+GV+L GT
Sbjct: 8 TKEALVVILDIGLGMHQHSNTNKQYTTTPIEEALKSATLLYQQKLLYGKKDELGVVLIGT 67
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKK 112
+ET+N L K+ GY H+ +I+ ++ L+ L G GD +DA++V +DMLI K
Sbjct: 68 KETKNNLQKD--GYHHITTQTEIEEPTLETLKFLEQLKPGQSRGDIIDALIVAMDMLIHK 125
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
+ K +K + L+T+ P+ D+ T DQ I ++ G+ + L +
Sbjct: 126 TAKK-KYQKRIFLVTNCYDPINKDDLSTLRDQFKKIDVKLNIIGV---DFTDEEELENKI 181
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
+ EN+ L F++ + V + +++ + T+FR
Sbjct: 182 KLTKKEENEKFLREFAESVDGVLVPVKQALEMMSFFRSQSVLQRTVFRD---------TG 232
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 292
V VY+ E ++D D AT + + R +
Sbjct: 233 VVVYEDKDSE-------FTDAWKGVDSGATAKGRA-----------------TRCQNNNR 268
Query: 293 GPQVVPISSAEWEAVKF--KPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATV 349
G EA+ F + V L T+ + Y+ K + ++ PG+ A
Sbjct: 269 G--------QTGEALLFDKRSRYRVGLFRVTERIQKVPIYHNKGSTEMMVSPPGDKVARS 320
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S+L M E + + R V R G S + +L P++ K N +S Y LPF +D++
Sbjct: 321 ALSSLIHGMAETKQALLARYVKRNG-SSPSIALLYPHI--KANY-ESLYVCQLPFLDDLK 376
Query: 410 EFQFPSFS-KFPVS---WQPNEQQQEAADNLVKMLDLAPSGKGE------ILQPELTPNP 459
++QFP + P + + P +Q +AA L+ +DL + + E L+P T NP
Sbjct: 377 QYQFPPIAPTNPATRKPYIPTAEQVDAARALIDSMDLMTAEEDEDHQKIAALRPRFTYNP 436
Query: 460 ALEVLNIC 467
+L+ C
Sbjct: 437 SLQHFYQC 444
>gi|53586|emb|CAA46999.1| p80 Ku autoantigen [Mus musculus]
Length = 732
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 226/507 (44%), Gaps = 62/507 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P E K+ + +Q+++ E+ + L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSIPGEESPIEQAKKVMTMFVQRQVFSESKDEIALALYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
L+ + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 MPLSGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLRSPF-------SKDQLDVIICNLKKCGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTP 385
++M V A + A VA+S+L A+ E+N VAIVR + R Q V +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRSNPQVGVASLYIK 413
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 445
+ E++ + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 414 DAYERL------VYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKK 466
Query: 446 GKGEILQPEL-----TPNPALEVLNIC 467
+ E + +L PNP + L C
Sbjct: 467 NEEEDIVEDLFPASKIPNPEFQRLYQC 493
>gi|426221531|ref|XP_004004963.1| PREDICTED: X-ray repair cross-complementing protein 5 [Ovis aries]
Length = 733
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 231/511 (45%), Gaps = 62/511 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWNKAAVVLCMDVGLAMSNSFPGEESPFELAKKVITMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L E Y+++ V + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTENALAGE-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVR 165
K+ G+ ++ KKH+ + TD P DQ+ I + G+ ++ +V+
Sbjct: 120 KETLGKKFE-KKHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIVK 171
Query: 166 ASLSGEPHMRVIIENDNLLN-----IFSKKSSAKTLFVDSTTSLRGARKTRDI------- 213
+G+ ++ +D+ + I ++ + SL G +I
Sbjct: 172 KGGTGDRGDGSLLLDDHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSESL 231
Query: 214 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ +F+ L + + IK+ YK +EK K S
Sbjct: 232 RQLCVFKKMERHSMPWSCQLTIGSNLSIKIVAYKSITQEKV----KKSWTVVDARTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG ++P S + E +K++ E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYRSEGKCFSVLGFCR 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + Y+M + L + A + A VA+S+L A+ E++ VA+VR + Q + + VG
Sbjct: 348 SSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDQ-RTNPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P + + + + LPF ED+R++ F S K P E Q A D L+ +
Sbjct: 407 VAFPLIKDTY---ECLVYIQLPFMEDLRQYMFSSL-KNNRKCTPTEAQLSAVDALIDSMS 462
Query: 442 LAPSGKGEILQPEL-----TPNPALEVLNIC 467
L + E +L PNP + L C
Sbjct: 463 LVQKDEEEGTIEDLFPTSKIPNPQFQRLFQC 493
>gi|427788949|gb|JAA59926.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 687
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 55/465 (11%)
Query: 27 KLCSRL-IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQS 85
K C+ L IQ+++ EV V++ G+E T N L+ + Y+++ VL ++ V +++
Sbjct: 16 KTCAELMIQRRIFSESKDEVAVVICGSERTNNSLSSD-DEYQNIDVLCGLQPVSFDMLEK 74
Query: 86 LKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQV 145
L + DF+DAIVV +D ++ K + + L+++ KD Q
Sbjct: 75 LAEVEATKHVCDFVDAIVVALDTIVDKTKNLKFSSRRVVLLSNLGGTFKD-------SQQ 127
Query: 146 STIARQM--------VAFGLRMKNI---VVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
S IA M + ++NI + + S S + ++ + I +
Sbjct: 128 SIIAEGMKNSELSLTIVCPFDVQNIGDDLGKLSASQQKAVKYV------GRILEAVNGDS 181
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
F + +L K R + T + +LE+ + I + Y K E K K+ K
Sbjct: 182 YTFSQAMPALMSYEKKR--TRPTPWNANLEIGPDISIPISSYIKVVEVKPKPWKQCVAKR 239
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKP 311
P T V+ D Y ++ V + I YRYG +VP + A E K
Sbjct: 240 P------TVPVRCDTVYYRNDEKESEVEKDGTIPAYRYGSTLVPFTDENRAAMEGSKAGS 293
Query: 312 EKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+ +++LGFTD +NI RHYYM D + +A G+ A A+SAL +A+++ VAIVR
Sbjct: 294 GRGLQVLGFTDEANIKRHYYMGDKTSYVVARKGDESAGAALSALIQALRKSKMVAIVRYS 353
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PN 426
+ + + +G L+P + E+ + F LP+ ED+R F F P+ P
Sbjct: 354 F-SDKSAPRMGFLSPRIKERY---ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNIPT 404
Query: 427 EQQQEAADNLVKMLDLAP----SGKGEILQPELTPNPALEVLNIC 467
+ Q D+L+ +DL E+ + T NP L+ L C
Sbjct: 405 DTQLSLFDDLIAAMDLTAVDIDGEPEELFKSSQTSNPYLQRLYQC 449
>gi|291392199|ref|XP_002712509.1| PREDICTED: ATP-dependent DNA helicase II [Oryctolagus cuniculus]
Length = 733
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 223/520 (42%), Gaps = 80/520 (15%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARFWNKAAVVLCMDVGFAMGNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T++T+N L + Y+++ V + + + D L++ + Q G+ DFLDA++V +D++
Sbjct: 61 TDDTKNALA-DGDQYQNITVHRHLMLPDFDLLEDIDSKIQLGSQQADFLDALIVCMDVIQ 119
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK---------- 160
++ K+H+ + TD P +DQ+ I + G+ ++
Sbjct: 120 RETVGKRFEKRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPIGKE 172
Query: 161 ---------NIVVRASLSGEP----------------HMRVIIEN-DNLLNIFSKKSSAK 194
N+ + S P M V +E D L I+S S +
Sbjct: 173 DGTGDRGDGNLPLYHHGSSFPPKGITEQQKEGIQMVKMMMVSLEGEDGLDEIYSFSESLR 232
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
L V R + L + + IK+ YK +EK D
Sbjct: 233 QLCVFKKIEKRSMP----------WPCQLTIGSNLSIKIVAYKSIVQEKVKKTWTVVD-- 280
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-K 313
+++ + Y +D VP E ++G+RYG +VP S + E +K+K E K
Sbjct: 281 --ARTLKKEDIQKETVYCLNDDDETEVPKEDTLQGFRYGSDIVPFSKVDEEQMKYKSEGK 338
Query: 314 SVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
+LGF +S + R ++M V A + A VA+S+L A+ E++ VAIVR +
Sbjct: 339 CFSVLGFCRSSQVQRKFFMGYQVLKVFAAKDDEAAAVALSSLVHALDELDMVAIVRYAYD 398
Query: 373 QGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ + + VGV P + + + + LPF ED+R++ F S K + P E Q A
Sbjct: 399 R-RSNPQVGVAFPYIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKFTPTEAQLNA 453
Query: 433 ADNLVKMLDLAPSGKGE-----ILQPELTPNPALEVLNIC 467
D L+ + L + E + Q PNP + L C
Sbjct: 454 VDALIDSMSLVKKDEEEGTVEDLFQTTKIPNPEFQRLFQC 493
>gi|431918002|gb|ELK17231.1| ATP-dependent DNA helicase 2 subunit 2 [Pteropus alecto]
Length = 780
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 219/514 (42%), Gaps = 82/514 (15%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M++ P E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 26 AVVLCMDVGFTMNNSFPGEESPFELTKKVITMFVQRQVFAESKDEIALVLFGTDGTENAL 85
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGETYK 118
+ Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++
Sbjct: 86 ACK-DQYQNITVHRHLMLPDFDLLEDIESKIQTGSQQADFLDALIVCMDVIQQETVGKKF 144
Query: 119 GKKHLCLITDALCPLKDPDVGT---------------------KEDQVS-----TIARQM 152
K+H+ + TD P + T KED+ ++
Sbjct: 145 NKRHIEVFTDLSSPFSKDQLDTIIHNLRNSSISLQFFLPFPIGKEDETGDRGDGSLRSDH 204
Query: 153 VAFGLRMKNIV------------VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ +K I V SL GE D L I+S S + L +
Sbjct: 205 LGPAFPLKGITEQQKEGIQMVKTVMMSLEGE---------DGLDEIYSFSESLRQLCI-- 253
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
+ +T P L + + I + YK +EK K S
Sbjct: 254 ---FKKIERTSMPWPCQ-----LTIGSNLSINIMAYKSILQEKV----KKSWMVVDARTL 301
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLG 319
+++ + Y +D VP E I+G+RYG ++P S + E +K+K K +LG
Sbjct: 302 RKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSAGKCFSVLG 361
Query: 320 FTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F +S + R YYM + L A + A VA+S+L A+ E+ VAIVR + + + +
Sbjct: 362 FCRSSQVHRKYYMGNQVLKVFAAKDDEAAAVALSSLIHALDELGMVAIVRYAYDK-RANP 420
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
VGV P + + + + LPF ED+R++ F S + P E Q A D L+
Sbjct: 421 QVGVAFPYIKDTY---ECLVYVQLPFMEDLRQYMFSSLHN-NKKYTPTEAQLSAIDALID 476
Query: 439 MLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
++L + E +L PNP + L C
Sbjct: 477 SMNLIKKNEEEDTIEDLFPTTKIPNPQFQRLFQC 510
>gi|344268219|ref|XP_003405959.1| PREDICTED: X-ray repair cross-complementing protein 5 [Loxodonta
africana]
Length = 720
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 233/522 (44%), Gaps = 84/522 (16%)
Query: 1 MAR--TREALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L DV +M S L +K+ + +Q+++ EV ++LFG
Sbjct: 1 MARPGNKAAVVLCADVGFAMSNSFLDEESSLEQAKKVMTMFVQRQVFAESKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L +E Y+++ V + + + D L++ ++ Q G+ D LDA+VV +D++
Sbjct: 61 TDGTDNALAQE-NQYQNITVHRHLMLPDFDLLEDIESKIQPGSKHADILDALVVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLS 169
++ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ + S+
Sbjct: 120 QETVGKKFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKQSGISLQ-FFLPFSVG 170
Query: 170 GE------------------------------------PHMRVIIENDNLLN-IFSKKSS 192
GE M + +E D+ L+ I+S S
Sbjct: 171 GEDGTGDRGDGSLRLGHHGPSFPQKGITEQQKEGIQVVKRMMMSLEGDSGLDEIYSFSES 230
Query: 193 AKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSD 252
+ L V R + L + + IK+ YK +E T+KK +
Sbjct: 231 LRQLCVFKKIERRSMP----------WHCQLTVGSNLAIKIVAYKSIQQE---TIKK-TW 276
Query: 253 KAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
+++ + Y +D VP E I+G+RYG +VP S + E +K++ E
Sbjct: 277 AVVDARTLKKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYRSE 336
Query: 313 -KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K +LGF + + R ++M + L + AE + A VA+S+L A+ E++ VA+VR
Sbjct: 337 GKCFSVLGFCRSPQVQRRFFMGNQVLKVFAEKDDEAAAVALSSLIHALDELDMVAVVRYA 396
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 430
+ + + + VGV P++ + + + LPF ED+R++ F S K + P E Q
Sbjct: 397 YDK-KANPQVGVAFPHIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQL 451
Query: 431 EAADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
A D L+ + L + E +L PNP + C
Sbjct: 452 NAVDALIDSMSLVKKDEEEDTIEDLFPTTKIPNPQFQRFFQC 493
>gi|338725581|ref|XP_001489450.3| PREDICTED: x-ray repair cross-complementing protein 5 [Equus
caballus]
Length = 776
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 230/523 (43%), Gaps = 86/523 (16%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR ++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARWGSKAAVVLCIDVGFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L E Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTKNALAGE-DQYQNITVHRHLMLPDFDLLEDIESKIQPGSRQADFLDALIVCMDVIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV-------------- 153
++ G+ ++ KKH+ + TD P KD D+ + S+I+ Q
Sbjct: 120 RETVGKKFE-KKHIEVFTDLSSPFSKDQLDIIIHNLKKSSISLQFFLPFPIGKEDGTGDR 178
Query: 154 ----------AFGLRMKNIV------------VRASLSGEPHMRVIIENDNLLNIFSKKS 191
+K I V SL GE + L I+S
Sbjct: 179 GDGNLGSDHHGLDFPLKGITEQQKEGIQMVKKVMMSLEGE---------EGLDEIYSFSE 229
Query: 192 SAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYS 251
S + L V R + L + + IK+ YK +EK K S
Sbjct: 230 SLRRLCVFKKIERRS----------IPWACQLTIGSNLSIKIVAYKSIVQEKV----KKS 275
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
+V+ + Y +D VP E+ I+GYRYG ++P S + E +K+K
Sbjct: 276 WTVVDARTVKKEDVQKETVYCLNDDDETEVPKEETIQGYRYGSDIIPFSKVDEEQMKYKS 335
Query: 312 E-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRC 369
E K +LGF +S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR
Sbjct: 336 EGKCFSVLGFCRSSQVHRRYFMGNQVLKVFAARDDKAAAVALSSLIHALDELDMVAVVRY 395
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 429
V+ + + + VGV P + + + + LPF ED+R++ F S K P E Q
Sbjct: 396 VYDR-RANPQVGVAFPCIKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQ 450
Query: 430 QEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
A L+ + L + E +L PNP + L C
Sbjct: 451 LSAVGALIDSMSLVKKDEEENTIEDLFPTTKIPNPEFQRLFQC 493
>gi|440905725|gb|ELR56072.1| X-ray repair cross-complementing protein 5, partial [Bos grunniens
mutus]
Length = 705
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 222/513 (43%), Gaps = 80/513 (15%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M + PD E K+ + +Q+++ EV ++LFGT+ TEN L
Sbjct: 2 AVVLCMDVGLAMSNSFPDEESPFELAKKVMTMFVQRQVFAENKDEVALVLFGTDGTENAL 61
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
Y+++ V + + D L++ ++ Q G+ D LDA++V +D++ ++ G+ +
Sbjct: 62 AAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQEETLGKKF 120
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------------- 164
+ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 121 E-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGKQGGTGDRG 172
Query: 165 RASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDST 201
SL + H M + D L I+S + + L V
Sbjct: 173 DGSLLSDHHGPSFPPKGITKQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEALRQLCVFKK 232
Query: 202 TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
T R + L + + IK+ YK +EK D A + K A
Sbjct: 233 TERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD-ARTLKKEA 281
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGF 320
+ V Y +D V E I+G+RYG ++P S + E +K+K E K +LGF
Sbjct: 282 IQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGF 338
Query: 321 TDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
+S + Y+M + L + A + A VA+S+L A+ E++ VA+VR V+ + + +
Sbjct: 339 CRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVYNE-KTNPQ 397
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
VGV P + + + + LPF ED+R++ FPS K P E Q A D L+
Sbjct: 398 VGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLSAVDALIDS 453
Query: 440 LDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ L + E +L PNP + L C
Sbjct: 454 MSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQC 486
>gi|18181884|dbj|BAB83859.1| Xrcc5 [Rattus norvegicus]
Length = 683
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 206/458 (44%), Gaps = 51/458 (11%)
Query: 44 EVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI 102
E+ ++L+GT+ T+N L + Y+++ V + + + D L++ + + Q + DFLDA+
Sbjct: 4 EIALVLYGTDGTDNALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDAL 62
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
+V +D++ + GKKH+ + TD P +DQ+ I + G+ ++
Sbjct: 63 IVCMDLIQHETIGKKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFF 115
Query: 163 V-VRASLSGEPHMRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI 213
+ +GEP R +++ D+L F +K + + SL G +I
Sbjct: 116 LPFPIDKNGEPGERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEI 175
Query: 214 -------SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ IF+ L + + I++ YK +EKF K S
Sbjct: 176 YSFSESLQQLCIFKKIERRSLPWPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVD 231
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K
Sbjct: 232 ARTLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCF 291
Query: 316 KLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + +
Sbjct: 292 SVLGFCKSSQVHRRFFMGHQVLKVFATKDDEAAAVALSSLVHALDELNMVAIVRYAYDK- 350
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ + VGV P + + + + LPF ED+R++ F S K P E Q A D
Sbjct: 351 RSNPQVGVAFPYIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAID 406
Query: 435 NLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+L+ + L + E + +L PNP + L C
Sbjct: 407 DLIDSMSLVKKNQEEDIIEDLFPTSKIPNPEFQRLYQC 444
>gi|156120929|ref|NP_001095611.1| X-ray repair cross-complementing protein 5 [Bos taurus]
gi|154426068|gb|AAI51453.1| XRCC5 protein [Bos taurus]
Length = 733
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 226/521 (43%), Gaps = 82/521 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWDKAAVVLCMDVGLAMSNSFPGEESPFELAKKVMTMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L Y+++ V + + D L++ ++ Q G+ D LDA++V +D++
Sbjct: 61 TDGTKNALAAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 164
++ G+ ++ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 120 EETLGKKFE-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 165 --------RASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSA 193
SL + H M + D L I+S +
Sbjct: 172 QGGTGDRGDGSLLSDHHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEAL 231
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ L V T R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKTERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD- 280
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
A + K A + V Y +D V E I+G+RYG ++P S + E +K+K E
Sbjct: 281 ARTLKKEAIQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEG 337
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + Y+M + L + A + A VA+S+L A+ E++ VA+VR V+
Sbjct: 338 KCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVY 397
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P + + + + LPF ED+R++ FPS K P E Q
Sbjct: 398 NE-KTNPQVGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLS 452
Query: 432 AADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
A D L+ + L + E +L PNP + L C
Sbjct: 453 AVDALIDSMSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQC 493
>gi|302406464|ref|XP_003001068.1| Ku80 [Verticillium albo-atrum VaMs.102]
gi|261360326|gb|EEY22754.1| Ku80 [Verticillium albo-atrum VaMs.102]
Length = 722
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 202/441 (45%), Gaps = 48/441 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K +GV+ T+ET + L E GYE++ +LQ+I + H ++ L+ + P T GD
Sbjct: 49 KTWTIGVVGLKTDETRHLLQDE-EGYENISILQEIGPMSMHSLKELQDVIVPSETHTGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AIV+ VDM+ +KY + K + + LITD P+ D +++ +++ G+
Sbjct: 108 VSAIVIAVDMM-EKYTKALKYARKIYLITDGTGPIDGDDFEDITKKINQDGIELIVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLL-NIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ +P ++ +N+ LL ++ SK A+ + + + + P
Sbjct: 167 FDDAEYGFKEEDKPSLKA--KNERLLKDLVSKCKDAQLATIAEAIDELDTPRLKPVRPYK 224
Query: 218 IFRGDLELSE--------KMKIKVWVYKKTGEEKFP---TLKKYSD----KAPSTDKFAT 262
+ G L L + M I V Y KT + P T+ +D +AP +
Sbjct: 225 SYDGPLTLGDVKDPKHPSPMVINVERYFKTKLARPPPASTVVLRTDPGPSQAPEGEGMEG 284
Query: 263 HEVKVDY-------EYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
E +++ YK V DP + V + KGY YG V IS +EW K +
Sbjct: 285 IESSLNFGAIRQARSYK-VNDPDAPGGKRDVEFDSLAKGYEYGRTAVHISESEWNMTKIE 343
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K+ +++GF A M + + ++ + ++ +A+S+L A+ E++ A+ R V
Sbjct: 344 TNKAFEIVGFIPADKFEPFLSMGESCITVSRKHDDKSQLALSSLIHALYELSSYAVARIV 403
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
+ G++ ++ +L P + + + Y LPFAEDVR +QFP + VS Q
Sbjct: 404 LKDGKEPQLI-LLAPGIEPDL---ECLYDVPLPFAEDVRSYQFPPLDRVVTVSGQTLTKH 459
Query: 425 ---PNEQQQEAADNLVKMLDL 442
P+++ +A + V +DL
Sbjct: 460 RLIPDDELNDAMSDFVDAMDL 480
>gi|296490345|tpg|DAA32458.1| TPA: ATP-dependent DNA helicase II [Bos taurus]
Length = 692
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 226/521 (43%), Gaps = 82/521 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWDKAAVVLCMDVGLAMSNSFPGEESPFELAKKVMTMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L Y+++ V + + D L++ ++ Q G+ D LDA++V +D++
Sbjct: 61 TDGTKNALAAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 164
++ G+ ++ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 120 EETLGKKFE-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 165 --------RASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSA 193
SL + H M + D L I+S +
Sbjct: 172 QGGTGDRGDGSLLSDHHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEAL 231
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ L V T R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKTERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD- 280
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
A + K A + V Y +D V E I+G+RYG ++P S + E +K+K E
Sbjct: 281 ARTLKKEAIQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEG 337
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + Y+M + L + A + A VA+S+L A+ E++ VA+VR V+
Sbjct: 338 KCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVY 397
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P + + + + LPF ED+R++ FPS K P E Q
Sbjct: 398 NE-KTNPQVGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLS 452
Query: 432 AADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
A D L+ + L + E +L PNP + L C
Sbjct: 453 AVDALIDSMSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQC 493
>gi|395527743|ref|XP_003765999.1| PREDICTED: X-ray repair cross-complementing protein 5 [Sarcophilus
harrisii]
Length = 817
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 230/509 (45%), Gaps = 66/509 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
T+ A++L LDVS +M P E K+ + +Q+++ EV ++LFGT+ T+
Sbjct: 91 TQAAVVLCLDVSFNMMHSFPGEESSFEQAKKVMTMFLQRQVFAEAKDEVALVLFGTDTTK 150
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YG 114
N+L Y+++ V + + + D L++ L++ Q GT DFLDA+VV +D++ K+ G
Sbjct: 151 NDLATG-DQYQNITVHRHLMLPDFELLEDLQNSVQPGTRQADFLDALVVCMDVIQKETIG 209
Query: 115 ETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV----AFGLRMKNIVVRASL 168
+ ++ +KH+ + TD PL KD DV + S I+ Q G +S
Sbjct: 210 KKFE-RKHIEVFTDLSSPLSKDQLDVIVNNLKRSDISLQFFLPFPVDGEDGSEDTDDSSF 268
Query: 169 SGEPH----------------------MRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLR 205
E H + +++E ++ LN I+S S + L V R
Sbjct: 269 DSERHKPSLPPKGLTEQQKEGVCVVKNIMMLLEGEDGLNEIYSFSESLRQLSVFKKIERR 328
Query: 206 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
P+ + L + + I++ YK +EK D ++
Sbjct: 329 ---------PMP-WPCQLTIGSNLSIRIVAYKSVTQEKVKKTWTVVD----ARTLRKEDL 374
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDAS 324
+ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +S
Sbjct: 375 QKETVYCLNDDDETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSS 434
Query: 325 NILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
+ R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 435 QVHRKFFMGNQVLKVFAAKDDEAAAVALSSLIHALDQLDMVAIVRYAYDR-RSNPQVGVA 493
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 443
P + + + + LP+ ED+R++ F S + P E Q A D L+ + L
Sbjct: 494 FPFIKQAY---ECLVYIQLPYMEDLRQYLFSSL-RINKKCIPTEAQLSAVDALIDSMSLV 549
Query: 444 -----PSGKGEILQPELTPNPALEVLNIC 467
++ Q PNP + L C
Sbjct: 550 NRDDDEDTLEDLFQTSKIPNPQFQRLFQC 578
>gi|334347204|ref|XP_003341902.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Monodelphis domestica]
Length = 835
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 227/506 (44%), Gaps = 66/506 (13%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDVS +M++ P E K+ + +Q+++ E+ ++LFGT+ N
Sbjct: 37 AVVLCLDVSFTMNNSFPGEESSFEQAKKVMTMFLQRQVFAESKDEIALVLFGTDLFANGC 96
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
+ Y+++ V + + V D L + +++ Q G+ DFLDA++V +D++ K+ G+ +
Sbjct: 97 XS-LHQYQNINVHRPLMVPDLDLXKDIQNAIQPGSGHADFLDALIVCMDVIQKETIGKKF 155
Query: 118 KGKKHLCLITDALCP------------LKDPDVGTK--------------EDQVSTIARQ 151
+ +KH+ + TD P LK D+ + + S+ +
Sbjct: 156 E-RKHIEMFTDLNSPFSKDQMDIIISNLKRSDISLQFFLPFPIDKEDGDGDTDDSSFPSE 214
Query: 152 MVAFGLRMKNIV--VRASLSGEPHMRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLRGAR 208
L K + + SLS +M + +E ++ LN I+S S + L V R
Sbjct: 215 RQKPSLPQKGLTKQQKESLSVVKNMMMSLEGEDGLNEIYSFSESLRQLCVFKKIERRPM- 273
Query: 209 KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
P L + + IK+ YK +EK K S +V+ +
Sbjct: 274 ------PWPCL---LTIGSNLSIKIVAYKSVTQEKV----KKSWTVVDARTLRKEDVQKE 320
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 327
Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +S +
Sbjct: 321 TVYCLNDDDETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSSQVH 380
Query: 328 RHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R ++M + L A + A VA+S+L A+ E++ VAIVR + + + + VGV P
Sbjct: 381 RKFFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYAYDR-RSNPQVGVAFPF 439
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ + + + LP+ ED+R++ F S + P E Q A D L+ + L +
Sbjct: 440 IKQAY---ECLVYVQLPYMEDLRQYLFSSL-RNNKKCTPTEAQLSAVDALIDSMSLVNND 495
Query: 447 KGE-----ILQPELTPNPALEVLNIC 467
+ E + Q PNP + L C
Sbjct: 496 EDEDTIEDMFQTSKIPNPQFQRLFQC 521
>gi|344239522|gb|EGV95625.1| ATP-dependent DNA helicase 2 subunit 2 [Cricetulus griseus]
Length = 732
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 223/516 (43%), Gaps = 80/516 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESSFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDNTN 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YG 114
N L E Y+++ V + + + D L++ ++ Q G+ D LDA++V +D++ ++ G
Sbjct: 66 NALASE-DQYQNITVHRHLMLPDFDLLEDIESKIQLGSRQADILDALIVCMDLIQRETIG 124
Query: 115 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVRASLSG 170
+ ++ KKH+ + TD P +DQ+ I + G+ ++ + + +G
Sbjct: 125 KKFE-KKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNDETG 176
Query: 171 E------------PHM-----------------RVIIE---NDNLLNIFSKKSSAKTLFV 198
+ P RV++ D L I+S S + L V
Sbjct: 177 DRGDGDLGLDHCGPSFPQKGITEQQKEGICMVERVMVSLEGEDGLDEIYSFSESLRQLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
R + L + + IK+ YK +EK K S
Sbjct: 237 FKKIERRSMP----------WSCQLTIGPDLSIKIVAYKSIVQEKV----KKSWIVVDAR 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLKKEDIRKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + +
Sbjct: 343 LGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P + + + + LPF ED+R++ F S K P E Q A D+L
Sbjct: 402 NPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDL 457
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
++ + L + E +L PNP + C
Sbjct: 458 IESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQC 493
>gi|350537451|ref|NP_001233669.1| X-ray repair cross-complementing protein 5 precursor [Cricetulus
griseus]
gi|1044791|gb|AAA80450.1| Ku (p70/p80) protein [Cricetulus griseus]
gi|1589660|prf||2211394A Ku86 protein
Length = 732
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 223/516 (43%), Gaps = 80/516 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESSFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDNTN 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YG 114
N L E Y+++ V + + + D L++ ++ Q G+ D LDA++V +D++ ++ G
Sbjct: 66 NALASE-DQYQNITVHRHLMLPDFDLLEDIESKIQLGSRQADILDALIVCMDLIQRETIG 124
Query: 115 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVRASLSG 170
+ ++ KKH+ + TD P +DQ+ I + G+ ++ + + +G
Sbjct: 125 KKFE-KKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNDETG 176
Query: 171 E------------PHM-----------------RVIIE---NDNLLNIFSKKSSAKTLFV 198
+ P RV++ D L I+S S + L V
Sbjct: 177 DRGDGDLGLDHCGPSFPQKGITEQQKEGICMVERVMVSLEGEDGLDEIYSFSESLRRLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
R + L + + IK+ YK +EK K S
Sbjct: 237 FKKIERRSMP----------WSCQLTIGPDLSIKIVAYKSIVQEKV----KKSWIVVDAR 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLKKEDIRKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + +
Sbjct: 343 LGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P + + + + LPF ED+R++ F S K P E Q A D+L
Sbjct: 402 NPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDL 457
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
++ + L + E +L PNP + C
Sbjct: 458 IESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQC 493
>gi|355729443|gb|AES09870.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Mustela putorius furo]
Length = 697
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 227/515 (44%), Gaps = 80/515 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ A++L +DV +M + LP E K+ + +Q+++ E+ ++LFGT+ TEN
Sbjct: 1 KAAVVLCMDVGSAMSNSLPGEESPFELARKVMTMFVQRQVFAESRDEIALVLFGTDGTEN 60
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGE 115
L + Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++ G+
Sbjct: 61 ALAGK-DQYQNITVHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQQETVGK 119
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------ 163
++ K+H+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 120 KFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGD 171
Query: 164 -----VRASLSGEPH-MRVIIEN------------------DNLLNIFSKKSSAKTLFVD 199
R+ G ++ I E D L I+S S + L V
Sbjct: 172 RGDGNARSDHHGPSFPLKGITEQQKEGVRMVKKVMMSLEGEDGLDEIYSFSESLRQLCVF 231
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + IK+ YK +E+ K S
Sbjct: 232 KKIEKRSIP----------WHCTLTIGSSLSIKIVAYKSIIQERV----KKSWTVVDART 277
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 278 LKKEDLQKETVYCLNDDNETEVLKEDTIQGFRYGSDIVPFSKVDEELMKYKSEGKCFSVL 337
Query: 319 GFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R Y+M + L A + A VA+S+L A+ E++ VA+VR V+ + + +
Sbjct: 338 GFCRSSQVHRRYFMGNQVLKVFAAADDEAAAVALSSLIHALDELDMVAVVRYVYDK-RAN 396
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VG+ P + + + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 397 PQVGMAFPYIKDTY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTEAQLSAVDALI 452
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALEVLNIC 467
+ L G E +L PNP + L C
Sbjct: 453 DSMSLVKKGDKEDTIEDLFPTSKIPNPQFQRLFQC 487
>gi|197100259|ref|NP_001126362.1| X-ray repair cross-complementing protein 5 [Pongo abelii]
gi|55731214|emb|CAH92321.1| hypothetical protein [Pongo abelii]
Length = 732
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 229/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 113 YGETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQ 144
G+ ++ K+H+ + TD + LK D+ G + D
Sbjct: 123 IGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDG 181
Query: 145 VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTS 203
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 182 TFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV----- 236
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + P L + + I++ YK +E+ D
Sbjct: 237 FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S A+ E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKADEEQMKYKSEGKCFSVLGFCK 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 348 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 407 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 462
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 463 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|50551937|ref|XP_503443.1| YALI0E02068p [Yarrowia lipolytica]
gi|74634055|sp|Q6C7B9.1|KU80_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|49649312|emb|CAG79022.1| YALI0E02068p [Yarrowia lipolytica CLIB122]
Length = 726
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 212/460 (46%), Gaps = 48/460 (10%)
Query: 33 IQKKLIYGKNHEV-GVILFGTEETENELTKEVGGYEHVKVLQDIKVVD-GHLVQSLKHL- 89
I K++ G+ +V G++ T+ T+N + +E G+EH+ ++ I+ + L+++ K L
Sbjct: 44 ISNKILSGRKTDVVGLVGVHTDTTQN-MFEEESGFEHIDIITPIQQFNLDTLLEAKKQLV 102
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P GD + IVV V M IK Y + K +++ ++T+ + D G Q++
Sbjct: 103 PNSDNKGDLISGIVVAVQM-IKLYTKALKYIRNIVVLTNGQGNMNLGDSGGIIKQLNENR 161
Query: 150 RQMVAFGLRMKNIVVRASLSGEP-HMRVIIENDNLLNIFSKK--SSAKTLFVDSTTSLRG 206
+ G+ + V +P H R EN+ L F + S + ++ SL
Sbjct: 162 IILKVMGVDFDDEEVDYFEEDKPEHKR---ENELKLKEFVDRCEDSVFATYKEARDSL-D 217
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-- 264
K + ++PV F+G+L LS+ + G E FP ++ + S+ + E
Sbjct: 218 IPKVKAVNPVRAFQGNLVLSDPEQQPPQRVMSIGVEVFPCTRRATAMTASSYAMSKIEPA 277
Query: 265 ------------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
VK D +Y V D S K + + GYRYG ++V I+ E EA+
Sbjct: 278 TISTPSQNNLQAVKWDRQY-YVNDESGIGGKKELDRDTLENGYRYGSEIVYITKEEEEAI 336
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
F S++++GF + ++ + M + I + GN+R VA+SA ARA+ E + +
Sbjct: 337 MFPTSASLQVIGFVNKKSVPPYMLMGHTDYIIGQRGNNRDAVAISAFARALFETDNFGLA 396
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV------ 421
R V + G+ +V VL P + ++ + F LPFAED R+F PS +
Sbjct: 397 RYVNKDGKDPQIV-VLMPYIRAEL---EGLVFCQLPFAEDERKFILPSLTSLETRSGNKT 452
Query: 422 -----SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT 456
P ++ +A D+ V +DL+ KGE +P LT
Sbjct: 453 VTTHSRLLPTKEMLDAMDDYVDAMDLSKL-KGEDDEPWLT 491
>gi|383276559|ref|NP_001244295.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
gi|380816286|gb|AFE80017.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
Length = 732
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 229/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 113 YGETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQ 144
G+ ++ K+H+ + TD + LK D+ G + D
Sbjct: 123 IGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSGDRGDG 181
Query: 145 VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTS 203
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 182 TFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV----- 236
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + P L + + I++ YK +E+ D
Sbjct: 237 FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+++++ VAIVR + + + + VG
Sbjct: 348 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 407 VAFPHIKHNC---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 462
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 463 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|355565162|gb|EHH21651.1| hypothetical protein EGK_04770, partial [Macaca mulatta]
Length = 729
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 228/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 113 YGETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQ 144
G+ ++ K+H+ + TD + LK D+ G + D
Sbjct: 123 IGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSGDRGDG 181
Query: 145 VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTS 203
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 182 TFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV----- 236
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + P L + + I++ YK +E+ D
Sbjct: 237 FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 347
Query: 323 ASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L A + A VA+S+L A+++++ VAIVR + + + + VG
Sbjct: 348 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 407 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 462
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 463 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|355750820|gb|EHH55147.1| hypothetical protein EGM_04294, partial [Macaca fascicularis]
Length = 729
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 231/521 (44%), Gaps = 90/521 (17%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 113 YGETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQ 144
G+ ++ K+H+ + TD + LK D+ G + D
Sbjct: 123 IGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSGDRGDG 181
Query: 145 VSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSA 193
+ +F GL + +V+ SL GE D L I+S S
Sbjct: 182 TFRLGGHGPSFPPKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYSFSESL 231
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ L V + + P L + + I++ YK +E+ D
Sbjct: 232 RKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD- 280
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
+++ + Y +D V E I+G+RYG +VP S + E +K+K E
Sbjct: 281 ---AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEG 337
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + R ++M + L + A + A VA+S+L A+++++ VAIVR +
Sbjct: 338 KCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAY 397
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P++ + + LPF ED+R++ F S K + P E Q
Sbjct: 398 DK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLN 452
Query: 432 AADNLVKMLDLAPSGKG-----EILQPELTPNPALEVLNIC 467
A D L+ + LA + ++ PNP + L C
Sbjct: 453 AVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|383421375|gb|AFH33901.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
gi|384949286|gb|AFI38248.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
Length = 732
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 228/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 113 YGETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQ 144
G+ ++ K+H+ + TD + LK D+ G + D
Sbjct: 123 IGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSGDRGDG 181
Query: 145 VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTS 203
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 182 TFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV----- 236
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + P L + + I++ YK +E+ D
Sbjct: 237 FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 347
Query: 323 ASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L A + A VA+S+L A+++++ VAIVR + + + + VG
Sbjct: 348 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 407 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 462
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 463 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|303271277|ref|XP_003055000.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462974|gb|EEH60252.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 604
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 149/364 (40%), Gaps = 55/364 (15%)
Query: 89 LPQGTCAGDFLDAIVVGVDMLIK-KYGETYKGKKHLCLITD--ALCPLKDPDVGTKEDQV 145
L G A D+LDA+ V DML++ + G + +H+ +TD C + D + +
Sbjct: 17 LDAGDAAADYLDALTVASDMLVRHERGGGFA--RHVLFVTDLRTRCEIDD-------EFI 67
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEND---------------NLLNIFSKK 190
+ IA M +R+ VV G+ E D ++LN S
Sbjct: 68 AGIAAGMKGASVRLTVAVV----DGDGDAATTSEADEETKRVNRAMLQGLCDVLNEASGV 123
Query: 191 SSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 250
++A + +T+ P T FRGDLE + + +KVWVYKK E K P++K
Sbjct: 124 AAASMSGIQDAVEALQVAQTKLTKPTTTFRGDLEFTPFVSLKVWVYKKVSEAKPPSMKLR 183
Query: 251 SDKAPSTDKFATHEVKVDYEYKSVEDPSK--VVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
D S + V + +KS DP VP E I Y YGP +PI V
Sbjct: 184 VDDDESGGAHEPNVVVRERSFKSYADPDNPVSVPSEMMISAYPYGPTNIPIQDDVAALVA 243
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA----------- 357
K +K +K+ GFT + + M + + + PG ++ A A +
Sbjct: 244 SKNDKGMKIFGFTPLDTVPQWLGMDEARILVPWPGREQSVAAGMAASAGFSPREAGKAAA 303
Query: 358 --------MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
M+ A+ R VW Q V G LTP+++ + D F LP++ED+
Sbjct: 304 AMSALARAMERKGVAALTRAVWTQNSDKVNFGALTPHITAEG---DFLLFVPLPYSEDMY 360
Query: 410 EFQF 413
F
Sbjct: 361 SSDF 364
>gi|348552630|ref|XP_003462130.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Cavia
porcellus]
Length = 729
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 228/512 (44%), Gaps = 64/512 (12%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARYGNKAAVVLCVDVGFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T N L Y+++ V + + + D L++ + Q G+ DFLDA++V +D++
Sbjct: 61 TDGTNNALAAG-DQYQNITVHRHLMLPDFDLLEDIDSRIQPGSQQADFLDALIVCMDVIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 164
++ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ +
Sbjct: 120 RETVGKKFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 165 --RASLSGEPHMRVIIENDNLLN--IFSKKSSAKTLFVDSTTSLRGARKTRDI------- 213
G+ ++++ + L I ++ + SL G +I
Sbjct: 172 KDGTGDRGDGNLQMGDHGSSFLQKGITEQQREGIHMVRKMMLSLEGTNGLEEIYSFSESL 231
Query: 214 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ +F+ L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKIERHSMPWPCQLTIGSNLSIKIVAYKSIVQEKVKKTWIVVD----ARTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCR 347
Query: 323 ASNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+S + R ++M + + +F A + A VA+S+L A+ E++ VAIVR + + + + V
Sbjct: 348 SSQVQRKFFMGNQVLKVFPAR-DDEAAAVALSSLIHALDELDMVAIVRYAYDR-RANPQV 405
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
GV P + E + + LPF ED+R++ F S K + P E Q +A D + +
Sbjct: 406 GVAFPFIKEAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLDAVDAFIDSM 461
Query: 441 DLAPSGKGEILQPEL-----TPNPALEVLNIC 467
L + E +L PNP + L C
Sbjct: 462 SLIEKDEEEDTIKDLFPTAKIPNPEFQRLFQC 493
>gi|193613368|ref|XP_001944675.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 665
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 222/482 (46%), Gaps = 54/482 (11%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE------KLCSRLIQKKLIYGKNHE-VGVILFGTEE 54
A +E ++L +DV + + D + KLC+ +I ++ I+ ++ + V +ILFG+ +
Sbjct: 3 ANKKEVIILAIDVGINSLKLDSDGKTYFEKSKLCASMILRRKIFAESKDYVALILFGSNQ 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFLDAIVVGVDMLIKKY 113
T+N L + G +++++ + VV L++ + L P D+L+ +V+ DM K+
Sbjct: 63 TKNHLASQ--GCNNIEIVTSLGVVTWDLIKHIDSLSPSDITRSDWLNTLVLAADMAKKEI 120
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ + + T+ + + + T + G ++ V+R+S+
Sbjct: 121 QDKIFQDLQIVMFTNLATDISFDKIDIIARCIQTQRIDLTIIGTDCED-VLRSSV----- 174
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV 233
L F +K+ A T+ +DS K ++++P + L IKV
Sbjct: 175 ----------LETFIRKTEATTVSLDSVLPNICNYKLKEVTPRA-WNVPLSFGNVFNIKV 223
Query: 234 WVYKKTGEE----KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV-VPPEQRIK 288
YKK E K+ + Y + D + Y Y V++ ++ V E I
Sbjct: 224 IGYKKIDETPKSFKWSLCRNYD----TPDSITEMNKRTTYSY--VDNGEQIEVDHENIID 277
Query: 289 GYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
G+R+G ++P+S + +A +K + +++LGFT A NI R + M D +I +P +
Sbjct: 278 GFRFGDTIIPVSDLDIQAYSYKSGPRGLQVLGFTKAKNIQRSFLM-DGGSYIFKP-HKDD 335
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFA 405
VA SA+ +AM + ++ I+R V+ +G + P + +K N YF LP+A
Sbjct: 336 IVAFSAIFKAMIKREELMIIRKVYLNDCMP-TIGAMFPQIEDKEN-----YFVCVNLPYA 389
Query: 406 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
E+ F+ PS F +PN +++ A NL+ +DL + PE T +P L+ +
Sbjct: 390 EEEHLFKLPSLESF----KPNYEEKNAVCNLIDAMDLDDEDDELFI-PETTHDPELQYVY 444
Query: 466 IC 467
C
Sbjct: 445 DC 446
>gi|332209991|ref|XP_003254095.1| PREDICTED: X-ray repair cross-complementing protein 5 [Nomascus
leucogenys]
Length = 732
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 228/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 113 YGETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQ 144
G+ ++ K+H+ + TD + LK D+ G + D
Sbjct: 123 IGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDG 181
Query: 145 VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTS 203
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 182 TFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV----- 236
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + P L + + I++ YK +E+ D
Sbjct: 237 FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 348 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 407 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 462
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 463 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|154301924|ref|XP_001551373.1| hypothetical protein BC1G_10199 [Botryotinia fuckeliana B05.10]
Length = 864
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 204/452 (45%), Gaps = 50/452 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET+NEL + GY ++ VL+ + ++ +K P T GD
Sbjct: 48 KTDGVGIVGFRTDETDNELHSSGEEGYANISVLKQLGQFQMQQLEEVKEAVKPSDTDDGD 107
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ AIVV ++M+ K K G+ K + + LITD + ++ +++ ++V
Sbjct: 108 AISAIVVAMEMIKKHTTLKSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLV 167
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 208
G+ + E V EN+ LL F++K S +F + ++ +
Sbjct: 168 VIGVDFDD--AEYGFKEEDKDLVKSENEKLLRSFTEKCS-DGIFGTTAEAIEALATPVVK 224
Query: 209 KTRDISPVT--IFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKA---------P 255
TR+ + T + GD++ M I V Y +T + K + K Y D+ P
Sbjct: 225 VTREYNTYTGPLILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLP 284
Query: 256 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
+TD + Y+ P K V + +GY YG +VPIS ++ K + K
Sbjct: 285 NTDDLTSVTQARTYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIK 344
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
++GF ++ R+ M + + IA+ N +A +A+S+L A+ E++ A+ R V +
Sbjct: 345 DFSIMGFV-PNDYERYLNMGESCITIAQKTNEKARMALSSLIHALHELDSCAVARIVKKD 403
Query: 374 GQQSVVV---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
G ++V ++ P + I++P LPFAEDVR ++F K F S
Sbjct: 404 GSDPLIVLLAPLIEPGLEGLIDVP-------LPFAEDVRAYRFAPLDKVFNSSGGIMEKH 456
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P+ + A V +DL+ +GK + +P
Sbjct: 457 KNLPSNDLKAAMSKFVDSMDLSTAGKNDEGEP 488
>gi|347836338|emb|CCD50910.1| similar to ATP-dependent DNA helicase II subunit 2 [Botryotinia
fuckeliana]
Length = 724
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 204/452 (45%), Gaps = 50/452 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET+NEL + GY ++ VL+ + ++ +K P T GD
Sbjct: 48 KTDGVGIVGFRTDETDNELHSSGEEGYANISVLKQLGQFQMQQLEEVKEAVKPSDTDDGD 107
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ AIVV ++M+ K K G+ K + + LITD + ++ +++ ++V
Sbjct: 108 AISAIVVAMEMIKKHTTLKSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLV 167
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 208
G+ + E V EN+ LL F++K S +F + ++ +
Sbjct: 168 VIGVDFDD--AEYGFKEEDKDLVKSENEKLLRSFTEKCS-DGIFGTTAEAIEALATPVVK 224
Query: 209 KTRDISPVT--IFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKA---------P 255
TR+ + T + GD++ M I V Y +T + K + K Y D+ P
Sbjct: 225 VTREYNTYTGPLILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLP 284
Query: 256 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
+TD + Y+ P K V + +GY YG +VPIS ++ K + K
Sbjct: 285 NTDDLTSVTQARTYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIK 344
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
++GF ++ R+ M + + IA+ N +A +A+S+L A+ E++ A+ R V +
Sbjct: 345 DFSIMGFV-PNDYERYLNMGESCITIAQKTNEKARMALSSLIHALHELDSCAVARIVKKD 403
Query: 374 GQQSVVV---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
G ++V ++ P + I++P LPFAEDVR ++F K F S
Sbjct: 404 GSDPLIVLLAPLIEPGLEGLIDVP-------LPFAEDVRAYRFAPLDKVFNSSGGIMEKH 456
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P+ + A V +DL+ +GK + +P
Sbjct: 457 KNLPSNDLKAAMSKFVDSMDLSTAGKNDEGEP 488
>gi|302917037|ref|XP_003052329.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733268|gb|EEU46616.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 694
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 204/461 (44%), Gaps = 47/461 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ F T+ET+N+L + GYE++ VLQ++ + +++L+ + P T +GD + AI
Sbjct: 53 VGVVAFRTDETDNKLQDD-DGYENIAVLQELGPMSMSSLRNLQSVIKPSETWSGDAISAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV VDM+ + + K + + LITD P+ + +++ Q+ G+ N
Sbjct: 112 VVAVDMM-DTFTKKLKWNRKIILITDGQGPMDADGLSDISKKMNDSNIQLTVLGVDFDNP 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
+P+ + E L + ++ ++ L R + + P + G
Sbjct: 171 DYGFKEEDKPNTKEENEKSLKLLVDDCQNGVFATIAEAIDELDTPR-IKSVKPYKTYDGT 229
Query: 223 LELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD----YEYK 272
L L + MKI V Y KT + T K+ T +T V+ D E+
Sbjct: 230 LTLGDPERFPSAMKINVERYFKTHLARPLTASTVVVKSEGTGSESTQAVEGDEMEGVEFS 289
Query: 273 SVE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
+V DP + V E KG+ YG V IS +E K + +KS ++G
Sbjct: 290 AVRQARSYKVNDPDAPGGKRDVEFEDLAKGFEYGRTAVHISESEHNITKIETQKSFSIVG 349
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F S + +V + +A ++++ +A S+L A+ E+ I R V + G+ +
Sbjct: 350 FIPCSKYEPFLNLGEVCVTVASKFDAKSALAFSSLVWALSELESYGIARIVPKDGKDPQL 409
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQ 430
V ++ P V + + Y LPFAED+R +QFP + VS Q P ++
Sbjct: 410 V-LVAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVSGQTITKHRFLPTDELN 465
Query: 431 EAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
+A + V +DL+ G + +P E P NP + +N
Sbjct: 466 DAMSDYVDAMDLSTYGIDDEGEPAEFAPIDDTFNPTIHRIN 506
>gi|310791671|gb|EFQ27198.1| Ku70/Ku80 N-terminal alpha/beta domain-containing protein
[Glomerella graminicola M1.001]
Length = 732
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 191/451 (42%), Gaps = 56/451 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K VGV+ T+ET N + + GYE++ VLQ++ + ++ LK P T GD
Sbjct: 49 KTWTVGVVGLKTDETRNAMQDD-EGYENISVLQELGPMTMTSLRELKEAIKPSETANGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+V+ VDM I+ + + K K+ + L+TD L P+ DV +++ +++ G+
Sbjct: 108 VSAVVIAVDM-IEAFTKKLKYKRRIYLVTDGLAPIDGDDVDAIAKKINQDGIELIVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ +P ++ E L+++ SK +A+ + + + + P
Sbjct: 167 FDDADYGFKEEDKPSIKKKNEG-ILMDLVSKCDNAQFATIAEAIDELDTPRLKPVRPYKT 225
Query: 219 FRGDLELS------------EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD----KFAT 262
+ G L L + I V Y KT + K PT A D T
Sbjct: 226 YDGPLTLGLADPPPELKIPPTPVVINVERYFKTKQAKPPTASTVVVSAAGQDAASQSMQT 285
Query: 263 HE---------------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSA 302
E VK YK + DP + V E KGY YG V IS +
Sbjct: 286 AEGDPMEGVESIAGFAAVKSARTYK-INDPDAPGGKRDVEFESLAKGYEYGRTAVAISES 344
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
EW K K KS ++GF M + + + + ++ +A+S+L A+ E+
Sbjct: 345 EWNVTKLKTVKSFSIIGFIPCEKYEPFLNMGETCVTVGRKFDEKSQLALSSLIHALYELE 404
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 421
A+ R V + + V+V +L P + + + Y LPFAEDVR +QFP + V
Sbjct: 405 SYAVARLVVKDNKDPVLV-LLAPCIEPDM---ECLYDVPLPFAEDVRGYQFPPLDRVITV 460
Query: 422 SWQ---------PNEQQQEAADNLVKMLDLA 443
S Q P ++ +A + V +DL+
Sbjct: 461 SGQNITADHRLLPGDELTDAMSDYVDSMDLS 491
>gi|322707314|gb|EFY98893.1| ATP-dependent DNA helicase II subunit 2 [Metarhizium anisopliae
ARSEF 23]
Length = 688
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 61/512 (11%)
Query: 5 REALLLLLDVSPSM---HSVLPDVE---KLCSRLIQKKLIYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + +C + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGASMAQKHSGREESDLDWAMCYVWDKITDIVAANRKTLCVGVVGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKY 113
N L ++ GYE++ V+Q++ + +++LK P T +GD + AIVV +D LI +
Sbjct: 64 NNRL-QDGDGYENISVIQELSQITMSGLRALKASVKPNETMSGDAVSAIVVAID-LIGTF 121
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ K +++ L+TD + D+ +++ ++ G+ N +P
Sbjct: 122 TKKLKWIRNIVLVTDGQGDMDADDIEDIAKKINDSGIKLTVLGVDFDNPAYGFKEEDKPP 181
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------ 227
+ E+ I + ++ L R + + P + G L L +
Sbjct: 182 TKATSEHTLKALINQCEGGTFATMAEAIDELDTPR-VKSVKPYKTYDGALTLGDPEKFPA 240
Query: 228 KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 273
M I V Y KT E+ + + D +F+ VK YK
Sbjct: 241 AMNINVERYFKTHLARPLTASTVVVKSEQATQSTQTLEDDPMDGIEFSA--VKQARTYK- 297
Query: 274 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
V DP + V E KGY YG V IS +E K + EKS ++GF +
Sbjct: 298 VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESEHNITKLETEKSFSIVGFIPWTKYEP 357
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
M +V + A ++++ +A+S+L A+ E+ A+ R V + G+ ++V ++ P +
Sbjct: 358 FLNMGEVCVTHARKNDTKSELALSSLIWALLELESYAVARIVTKDGKDPLLV-LMAPQLE 416
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKM 439
+ + FY LPFAEDVR +QFP + VS Q P+++ +A + V
Sbjct: 417 LGL---ECFYDIPLPFAEDVRSYQFPPLDRVITVSGQTLKTHRLLPSDELAKAMSDYVDA 473
Query: 440 LDLAPSGKGEILQP------ELTPNPALEVLN 465
+DLA G+ E P + T NPA+ +N
Sbjct: 474 MDLATYGQDEEGNPAEYASIDETFNPAIHRVN 505
>gi|367027154|ref|XP_003662861.1| hypothetical protein MYCTH_2118116 [Myceliophthora thermophila ATCC
42464]
gi|347010130|gb|AEO57616.1| hypothetical protein MYCTH_2118116 [Myceliophthora thermophila ATCC
42464]
Length = 721
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 207/478 (43%), Gaps = 68/478 (14%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGD 97
K VGV+ TEET N E + GYEH+ VLQ I + ++ L+ L T GD
Sbjct: 49 KTWTVGVVGLNTEETVNAQHSEGLEGYEHISVLQGIGPMTMSSLRDLRSMILSSRTHGGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ AIVV + M I+ + + K + + L+T+ P+ D ++++ + ++V G+
Sbjct: 109 AISAIVVALTM-IEDFTKKLKYNRKIILVTNGESPIDDESSEEVANRLNELNVELVVVGV 167
Query: 158 RMKN--------IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ R + E +R ++E N + + + + L + +R
Sbjct: 168 DFDDPDYGYKEEDKSRGKANNEKILRKLVEQCNSGVFGTMQQAVEELAIPRIKPVR---- 223
Query: 210 TRDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKY----------SDK 253
P + G L L + K I V Y KT PT +
Sbjct: 224 -----PFKAYDGPLTLGDPQKYQSALSIHVERYFKTKRAVPPTASTVVTNPERGGPSQPQ 278
Query: 254 APSTD------KFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSA 302
AP D +F+ + Y +V+DP + V E+ KGY+YG VVP S +
Sbjct: 279 APGEDIVMGGTEFSGVKHMRTY---TVDDPDAPGGKRDVDFEELAKGYQYGRTVVPFSES 335
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
++ K + +KS ++GF S+ + M + + +A+ N A + +SAL A+ E+
Sbjct: 336 DFSVTKLETKKSFTIIGFIPFSSYSQFINMGETGVVVAQKHNEEAELGLSALIHALHELE 395
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 421
A+ R V + G Q ++ +L PN + + + + Y LPFAEDVR +QFP K V
Sbjct: 396 SYAVARYVQKDGTQPQIL-LLKPNPALEDDF-ECLYDVPLPFAEDVRSYQFPPLDKVLTV 453
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
+ P+E ++A + V +DL E +P E P NP + LN
Sbjct: 454 TGNVIKEHRLLPSEDLKQAMSDFVDAMDLTGFDVDEEGKPVEYAPIDELYNPVIHRLN 511
>gi|336378342|gb|EGO19500.1| hypothetical protein SERLADRAFT_363906 [Serpula lacrymans var.
lacrymans S7.9]
Length = 811
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 206/468 (44%), Gaps = 67/468 (14%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GVI+FG+E+T+N + + GGYEHV + + + L L
Sbjct: 36 IQEMIFNGRKTDQCGVIVFGSEDTDNVINDKSGGYEHVSEYIPVAQPNAGTLTKLDALSP 95
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
GD +DA++VG++ + + + L+TD P++ D ++ +++
Sbjct: 96 SEVTGDPVDALIVGIETQDQYLSSKRTWTRKIVLLTDGENPIEIEDWEATVQKMDSLSIA 155
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+ G+ + L E + I+ +N L + K +++ V T +L +R
Sbjct: 156 LTVVGVDFDD----EELPFEEENKSTIKAENEL-FYKKLTTSLQSGVMGTCALALQEISR 210
Query: 212 -DISPV------TIFR-GDLE--LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS----- 256
+I V T+ R GD++ E +++ V K T + KK++ +
Sbjct: 211 PEIKQVKSTLMGTVIRLGDVDGRPDEAIEVLVKASKCTALTRPKGWKKFASRQAGDDEYE 270
Query: 257 --------TDKFATHEVKVDYEYKSV-------------------EDPSKVVPPEQRIKG 289
T FA +++ +Y ++ S+ V EQ I+G
Sbjct: 271 GGEEDEDRTVSFAQLKMRTEYYIDHGEHEDEDDESEDGDKSPTGKDENSEKVEKEQLIRG 330
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
++YG P ++ + +K + + GF A N R M +V A+P +++ V
Sbjct: 331 FKYGTTYAPCPDGQFP--RLPTQKGMDICGFFQARNFRRELAMGEVQYIWADPSSAQQQV 388
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S++ +AM E + +AI R V + G +GVL P+V +KI D + +PFA+DVR
Sbjct: 389 ALSSIVQAMYEKDVLAIARWVTKDGMDP-KMGVLAPSVFDKI---DCLLWVQMPFADDVR 444
Query: 410 EFQFPSFS-----------KFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
++ F S K P + P + Q A +N V +DL +G
Sbjct: 445 KYNFASLDYLMSKKGERIMKHP--YIPTDDQLSAMENFVDAMDLMDAG 490
>gi|389632287|ref|XP_003713796.1| hypothetical protein MGG_10157 [Magnaporthe oryzae 70-15]
gi|351646129|gb|EHA53989.1| hypothetical protein MGG_10157 [Magnaporthe oryzae 70-15]
Length = 726
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 206/472 (43%), Gaps = 53/472 (11%)
Query: 26 EKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVKVLQDIKVVDGHLV 83
+KLC+ + K +VGV+ T+ T+N L + G GY ++ VLQ++ + +
Sbjct: 38 DKLCTTTAASR----KTWQVGVVGVRTDVTDNPL-DDAGEKGYNNISVLQNVAPMTLSAL 92
Query: 84 QSL--KHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTK 141
+ L K +P T GD + AIVV + M+ + + K K+ + L+TD + DVG
Sbjct: 93 KLLQDKLVPSSTSDGDVVSAIVVAIAMIDEAAPQRLKYKRKIVLVTDGQGAIDGDDVGDI 152
Query: 142 EDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVD 199
+++ + ++ G+ + E ++ N+ LL S K S ++
Sbjct: 153 ARRINELNIEITIIGVDFDD--PEYPFKEEDKSQLKARNEKLLKSISTECKESVYGTMIE 210
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSE-------KMKIKVWVYKKTGEEKFPT-----L 247
+ L R + P F G L L + + I V Y KT + + T +
Sbjct: 211 AVDELDTPR-IKSTKPYKSFDGQLTLGDPETYKESALSIHVERYFKTKQARPITASNVMV 269
Query: 248 KKYSDKAPSTDKFAT--------HEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGP 294
K +D S F ++K YK V DP + VP ++ +GY YG
Sbjct: 270 KSETDATQSGQDFEGGDGAGGQFADLKTARNYK-VLDPDAPGGKRDVPQDELARGYLYGR 328
Query: 295 QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSAL 354
VP+ +E+ K + +KS ++GF R M + ++ A N + +A SAL
Sbjct: 329 TAVPMPESEFNITKLETKKSFTIIGFIAWEKYERFLNMGESSVIFASKFNEKDELAFSAL 388
Query: 355 ARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFP 414
A+ E + R V + G++ ++ +L P++ I + Y LPFAED+R +QFP
Sbjct: 389 VNALYETESYGVARLVAKDGKEPQLL-LLMPHIDTDI---ECLYDVPLPFAEDIRYYQFP 444
Query: 415 SFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTP 457
K + Q P+++ +EA + V +D++ +G + E P
Sbjct: 445 PLDKVVTLGGQTLTKHRLLPSDELEEAMSDYVDAMDISAAGGDDEEAQEYAP 496
>gi|119590969|gb|EAW70563.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa), isoform CRA_b [Homo sapiens]
Length = 827
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 230/521 (44%), Gaps = 90/521 (17%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 217
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 218 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 277
Query: 146 STIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
+ +F GL + +V+ SL GE D L I+S S +
Sbjct: 278 FRLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYSFSESLR 327
Query: 195 TLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
L V + I +I + L + + I++ YK +E+ D
Sbjct: 328 KLCV-----------FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD- 375
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
+++ + Y +D V E I+G+RYG +VP S + E +K+K E
Sbjct: 376 ---AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEG 432
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR +
Sbjct: 433 KCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAY 492
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P++ + + LPF ED+R++ F S K + P E Q
Sbjct: 493 DK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLN 547
Query: 432 AADNLVKMLDLAPSGKG-----EILQPELTPNPALEVLNIC 467
A D L+ + LA + ++ PNP + L C
Sbjct: 548 AVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 588
>gi|15825665|pdb|1JEQ|B Chain B, Crystal Structure Of The Ku Heterodimer
gi|15825717|pdb|1JEY|B Chain B, Crystal Structure Of The Ku Heterodimer Bound To Dna
Length = 565
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 225/510 (44%), Gaps = 68/510 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 123 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 182
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 183 FRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV-----F 237
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + P L + + I++ YK +E+ D +
Sbjct: 238 KKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKED 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +
Sbjct: 289 IQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKS 348
Query: 324 SNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + R ++M + L A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 349 SQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGV 407
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
P++ + + LPF ED+R++ F S K + P E Q A D L+ + L
Sbjct: 408 AFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSL 463
Query: 443 APSGKG-----EILQPELTPNPALEVLNIC 467
A + ++ PNP + L C
Sbjct: 464 AKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|336273738|ref|XP_003351623.1| hypothetical protein SMAC_00164 [Sordaria macrospora k-hell]
gi|380095902|emb|CCC05949.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 724
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 200/469 (42%), Gaps = 51/469 (10%)
Query: 41 KNHEVGVILFGTEETEN-ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VGV+ T+ET+N E +E GYE++ VLQ++ + +++LK P T + D
Sbjct: 49 KTWNVGVVGLNTDETDNNENREEYQGYENISVLQELGPMSMTSLRALKSQIEPSETSSAD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ AIVV + M I+ Y + K K+ + L+T+ P+ D ++ + ++V G+
Sbjct: 109 AISAIVVALRM-IQVYTKKLKYKRKIILVTNGESPIDDDQSEDVAAMLNNVGIELVVIGI 167
Query: 158 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISP 215
+ E + EN+ +L ++ + L R + + P
Sbjct: 168 DFDD--AEYGFKEEDKTQHKAENERILKTLVDLCENGEFGTMAQAVEELAIPR-IKPVRP 224
Query: 216 VTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYS-------------DKAPS 256
+ G L L + K I V Y KT P+ + D
Sbjct: 225 FKAYDGPLTLGDPQKYPSALSIPVERYFKTKRATPPSASNVAIHTGPPQAEVIDEDSGAP 284
Query: 257 TDKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
VK Y+ V+D K + E K Y+YG VVP S++E + VK++
Sbjct: 285 MSGVEFQPVKQLRTYR-VDDAKAAGGKKDIEMEDLAKAYQYGRTVVPFSTSEEDYVKYQT 343
Query: 312 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
KS ++GF S+ M + L +A+ N +A + +SAL A+ E+ A+ R V
Sbjct: 344 TKSFTIIGFVPMSSYEPFINMGETGLIVAQKVNEQAELGLSALIHALHELESYAVARYVN 403
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV---------S 422
+ ++ +L PN + + ++ + Y LPFAEDVR +QFP K
Sbjct: 404 KDKAAPQIL-LLKPNPAIEDDV-ECLYDVPLPFAEDVRSYQFPPLDKVLTITGNVLTEHR 461
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
PN+ Q+A + V +DL G+ E P E P NP + +N
Sbjct: 462 LLPNDDLQQAMGDYVDAMDLTDFGQDEDGNPAEYAPIDDVYNPVIHHMN 510
>gi|426338512|ref|XP_004033222.1| PREDICTED: X-ray repair cross-complementing protein 5 [Gorilla
gorilla gorilla]
Length = 732
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 226/510 (44%), Gaps = 68/510 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 123 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 182
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 183 FRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV-----F 237
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + P L + + I++ YK +E+ D +
Sbjct: 238 KKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKED 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +
Sbjct: 289 IQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKS 348
Query: 324 SNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 349 SQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGV 407
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
P++ + + LPF ED+R++ F S K + P E Q A D L+ + L
Sbjct: 408 AFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSL 463
Query: 443 APSGKG-----EILQPELTPNPALEVLNIC 467
A + ++ PNP + L C
Sbjct: 464 AKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|10863945|ref|NP_066964.1| X-ray repair cross-complementing protein 5 [Homo sapiens]
gi|125731|sp|P13010.3|XRCC5_HUMAN RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=86 kDa subunit of Ku antigen; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit;
AltName: Full=CTC box-binding factor 85 kDa subunit;
Short=CTC85; Short=CTCBF; AltName: Full=DNA repair
protein XRCC5; AltName: Full=Ku80; AltName: Full=Ku86;
AltName: Full=Lupus Ku autoantigen protein p86; AltName:
Full=Nuclear factor IV; AltName: Full=Thyroid-lupus
autoantigen; Short=TLAA; AltName: Full=X-ray repair
complementing defective repair in Chinese hamster cells
5 (double-strand-break rejoining)
gi|307093|gb|AAA59475.1| Ku antigen [Homo sapiens]
gi|307094|gb|AAA36154.1| Ku (p70/p80) subunit [Homo sapiens]
gi|17512093|gb|AAH19027.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Homo sapiens]
gi|66267600|gb|AAH95442.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Homo sapiens]
gi|109821670|gb|ABG46942.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [Homo sapiens]
gi|119590968|gb|EAW70562.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa), isoform CRA_a [Homo sapiens]
gi|123984481|gb|ABM83586.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [synthetic construct]
gi|123998499|gb|ABM86851.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [synthetic construct]
gi|224487761|dbj|BAH24115.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [synthetic construct]
Length = 732
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 226/510 (44%), Gaps = 68/510 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 123 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 182
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 183 FRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV-----F 237
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + P L + + I++ YK +E+ D +
Sbjct: 238 KKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKED 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +
Sbjct: 289 IQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKS 348
Query: 324 SNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 349 SQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGV 407
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
P++ + + LPF ED+R++ F S K + P E Q A D L+ + L
Sbjct: 408 AFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSL 463
Query: 443 APSGKG-----EILQPELTPNPALEVLNIC 467
A + ++ PNP + L C
Sbjct: 464 AKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|367050686|ref|XP_003655722.1| hypothetical protein THITE_2119725 [Thielavia terrestris NRRL 8126]
gi|347002986|gb|AEO69386.1| hypothetical protein THITE_2119725 [Thielavia terrestris NRRL 8126]
Length = 721
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 192/451 (42%), Gaps = 64/451 (14%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K +GV+ TEET N +E + GY+H+ VLQ+I ++ L+ L P + GD
Sbjct: 49 KTWTLGVVGLNTEETNNAQDREGLEGYDHISVLQEIGPASMSTLRDLRSLIQPSRSNGGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ A+VV + M I+++ + K + + L+T+A P+ D + +++ ++V G+
Sbjct: 109 AISAVVVALSM-IEEFTKKLKYNRRIILVTNAESPIDDESLEDVASRLNESNIELVVIGI 167
Query: 158 RMKNIVV--------RASLSGEPHMRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLRGAR 208
+ RA + E +R ++ D N +F + A V+ R
Sbjct: 168 DFDDPEYGFKEEDKSRAKAANEKTLRKLV--DQCSNGVFGTMAQA----VEELAIPR--- 218
Query: 209 KTRDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
+ + P + G L L + K I V Y KT P A T
Sbjct: 219 -IKPVRPFKAYDGPLTLGDPSKYESALSIHVERYFKTKRAMAPAASTVVVNAERVGPSQT 277
Query: 263 HEVKVDYEYKS-------------VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEW 304
+ D E V DP + V E KGY+YG VVP S ++
Sbjct: 278 QALDEDIEMGGTGFSGVKQMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDL 337
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
K + +KS +LGF + + M + + +A+ N +A + +SAL + E+
Sbjct: 338 SVTKLETKKSFTILGFVPSRSYNFFLNMGETGVIVAQKHNEQAELGLSALIHTLHELESY 397
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFSK-FP 420
A+ R V + G Q + +L PN + + D F Y LPFAEDVR +QFP K
Sbjct: 398 AVARYVQKDGAQPQIF-MLKPNPA----LEDEFECLYDVPLPFAEDVRSYQFPPLDKVLT 452
Query: 421 VSWQ--------PNEQQQEAADNLVKMLDLA 443
V+ P+E ++A + V +DL+
Sbjct: 453 VTGNVIKEHRLLPSEDLKQAMSDFVDAMDLS 483
>gi|342885898|gb|EGU85850.1| hypothetical protein FOXB_03698 [Fusarium oxysporum Fo5176]
Length = 716
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 53/464 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T+ET+N+L + GYE++ VLQ++ + +++L+ L P T +GD + AI
Sbjct: 53 VGVLGLRTDETDNKLQDD-DGYENIAVLQELGPMTMSSLRNLQSLVKPSNTWSGDAVSAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
V+ VDM I + + K + + L+TD P+ D+G +++ Q+ G+ +
Sbjct: 112 VLAVDM-IDTFTKKLKWNRKIFLVTDGQGPMDADDLGDISKKMNDSNIQLTVLGVDFDDP 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFR 220
+P + EN+ L + ++ L R + + P +
Sbjct: 171 EYGFKEEDKPSTKK--ENEQALRSLVNDCQDGVIANITEAIDELDTPR-IKAVKPYKTYD 227
Query: 221 GDLELSE------KMKIKVWVYKKTG-------------EEKFPTLKKYSDKAPSTDKFA 261
G L L + + I V Y KT E P + A +
Sbjct: 228 GPLTLGDPNTFPAALNINVERYFKTKLARPLTASTVVVKSEGAPDSEPTQADADDMEGIE 287
Query: 262 THEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
VK YK V DP + V + KGY YG V IS +E+ K +KS
Sbjct: 288 FSAVKQARSYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEYNITKIDTQKSFS 346
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
++GF S + + + +A ++++ +A+S+L A+ E+ AI R V + G+
Sbjct: 347 IVGFIPCSKYEPFLNLGETCVTVARKFDAKSALALSSLVWALSELESYAIARIVTKDGKD 406
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 427
++V +L P+V + + Y LPFAED+R +QFP K V+ Q P +
Sbjct: 407 PLLV-LLAPSVEPDM---ECLYDIPLPFAEDIRSYQFPPLDKVITVTGQTLTTHRLLPTD 462
Query: 428 QQQEAADNLVKMLDLAPSG---KG---EILQPELTPNPALEVLN 465
+ +A + V +DL+ G KG E + + T NP + +N
Sbjct: 463 ELSDAMSDYVDAMDLSTYGLDDKGDPDEYVSIDETFNPTVHRVN 506
>gi|158254916|dbj|BAF83429.1| unnamed protein product [Homo sapiens]
Length = 732
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 225/510 (44%), Gaps = 68/510 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDAIQHET 122
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 123 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 182
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 183 FRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV-----F 237
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + P L + + I++ YK +E+ D +
Sbjct: 238 KKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKED 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +
Sbjct: 289 IQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKS 348
Query: 324 SNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 349 SQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGV 407
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
P++ + + LPF ED+R++ F S K + P E Q A D L+ + L
Sbjct: 408 AFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSL 463
Query: 443 APSGKG-----EILQPELTPNPALEVLNIC 467
A + ++ PNP + L C
Sbjct: 464 AKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|390369106|ref|XP_797768.3| PREDICTED: X-ray repair cross-complementing protein 5-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 136/264 (51%), Gaps = 18/264 (6%)
Query: 211 RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYE 270
R + P T ++ +LE+ ++KI V Y K E + K K +F ++ +
Sbjct: 165 RAVRP-TPWKVNLEIGSELKIPVSGYLKVKEATAKSWKSTFQKGHR--EFTPQTIRSKH- 220
Query: 271 YKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRH 329
+D V E +++GYRYG ++PIS + + + +K P K +++LGFT S I +H
Sbjct: 221 --LNDDEETEVEKEDQVEGYRYGNDIIPISEEDKKNMDYKKPGKVMQVLGFTKDSKIKKH 278
Query: 330 YYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + V +F A+P + A ++ SAL A+ E N VAIVR + G + +G L P++
Sbjct: 279 QQIGNSVYIFYAQPDDQAAAMSFSALVNALYETNSVAIVRRAY-SGSSAPRIGFLAPHI- 336
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS--- 445
K N FY LPFAED+R + F S QP+E+Q A D+L+ +DL +
Sbjct: 337 -KANYEALFYIE-LPFAEDLRMYTFMSLDNNK-RCQPSEEQLAAVDSLIDNMDLMTAEED 393
Query: 446 --GKGEILQPELTPNPALEVLNIC 467
G E L+P+ T NP + L C
Sbjct: 394 EDGDTEALKPKNTLNPYTQRLCQC 417
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 2 ARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEE 54
++ +EA++++LDV PSM+ + L + + ++Q+K+ E+ +ILFGT
Sbjct: 3 SKEKEAIVIVLDVGPSMNQAPPGNCTTLETARDVITMILQRKVFAESKDEIALILFGTPG 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT 93
+ N++ Y+++ V + ++ D L+Q ++ Q +
Sbjct: 63 SANKMD-----YDNITVERPFRLADLDLIQHIRSNIQAS 96
>gi|241263209|ref|XP_002405506.1| ku P80 DNA helicase, putative [Ixodes scapularis]
gi|215496806|gb|EEC06446.1| ku P80 DNA helicase, putative [Ixodes scapularis]
Length = 687
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 218/467 (46%), Gaps = 38/467 (8%)
Query: 15 SPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQD 74
+P S L + + +IQ+++ E+ +++ G+++T N L+ + Y H+ V+ +
Sbjct: 5 APGKPSDLEEAKTCAELMIQRRIFSESKDEIALVVCGSQKTNNSLSSD-NEYTHIDVVAN 63
Query: 75 IKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPL 133
++ V L++ L + DF+DA+VV +D+L+ + + + G+K + L+++
Sbjct: 64 LQPVSFGLLEKLGSVKSTQHMCDFVDAVVVALDVLMDQTKNQKFAGRK-VVLLSNLGGAF 122
Query: 134 KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE-------PHMRVIIENDNLLNI 186
D Q + IA M L + + +GE P R + + I
Sbjct: 123 DD-------SQQNVIANGMKNSSLSLTVVCPFDIENGEDDTAKLSPSQRKAV--GYVSKI 173
Query: 187 FSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPT 246
F + +L K R + P T + +LE+ + I + Y K E K T
Sbjct: 174 LKTVEGDAYTFSQAVPALTTYEKKR-VRP-TPWNANLEIGPDLSIPISSYIKISEAKPKT 231
Query: 247 LKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA 306
K+ + P V+ D ++ V + + GYRYG +VP S + ++
Sbjct: 232 WKQCVAQRPDV------PVRCDATLYRNDEKETEVEKAETVAGYRYGTTLVPFSDEDRDS 285
Query: 307 VKF-KPEKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKV 364
++ + + +++LGFTDA+NI RHYYM D ++ A G+ A A+SAL +A+++ V
Sbjct: 286 LECTRGGRGLQVLGFTDAANIKRHYYMGDKTSYVLARKGDESAEAAMSALIQALEKSKMV 345
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 424
AIVR + + + S +G L+P + ++ + F LP+ ED+R F F +
Sbjct: 346 AIVRYAFSE-RSSPRMGFLSPRIKDEY---ECLVFVQLPYMEDLRRFTFAPLDANKDNI- 400
Query: 425 PNEQQQEAADNLVKMLDLAP---SGK-GEILQPELTPNPALEVLNIC 467
P E+Q D+L+ +DL+ +G+ E+ + T NP L+ C
Sbjct: 401 PTEEQLSVFDDLIAAMDLSEVEVNGEPQELFKSSQTCNPYLQRFYQC 447
>gi|242208290|ref|XP_002469996.1| predicted protein [Postia placenta Mad-698-R]
gi|220730896|gb|EED84746.1| predicted protein [Postia placenta Mad-698-R]
Length = 822
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 207/481 (43%), Gaps = 58/481 (12%)
Query: 17 SMHSVLPDVEKLCSRLIQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDI 75
++ V+ ++++ + + ++ G K + GVI FG+EET+N + ++ GGYE+V I
Sbjct: 37 ALQFVMLKIQEMAALTVATQIYNGRKTDQCGVITFGSEETDNIIHEKHGGYENVSEYIPI 96
Query: 76 KVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD 135
+ + L L T GD +DA++VG++ + + + L+TD P++
Sbjct: 97 GQPNAGTLAKLARLQPSTVIGDPIDALIVGIETQHQYLSSKKTWTRKMVLLTDGENPIEV 156
Query: 136 PDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT 195
D +++T+ + G+ + + G+ +++ N+ + +K +
Sbjct: 157 EDWEATVHKMNTVQIHLTVVGVDFDDEYLPFLEEGKSNIKRA--NEEFYHTLAKSMAHGI 214
Query: 196 L----FVDSTTSLRGARKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLK 248
+ F S ++T+ T+ R GD++ E M+I V K T + + K
Sbjct: 215 VGNCDFALQELSRPDIKQTKSALLGTVLRIGDVDARPEEAMEILVKTSKATAIARPKSWK 274
Query: 249 KYSDKA-------------PSTDKFATHEVKVDYEY-KSVEDPSKVVPP----------E 284
K++ + T+ +A ++ Y K + + PP E
Sbjct: 275 KFARRQKEESQEEANIPLDEETEVYAQLHMRTQYMIEKQPPEGEEDQPPVYEQLEGITKE 334
Query: 285 QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGN 344
+ ++G++YG P ++E + + + + GF N R + M +V A+P
Sbjct: 335 ELVRGFKYGSSYAPCPGGQFE--RLPTRRGIDICGFFLEKNFRREWEMSEVTYVWADPAQ 392
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF----- 399
VA+SA+ +AM E +AI R R G +GVL P + EK D F +
Sbjct: 393 PLQQVALSAVVQAMYEKGAMAIARWASRDGMDP-KMGVLRPTMFEKA---DCFMWVQTVE 448
Query: 400 ----NVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ +PFA+DVR F F S + P ++Q EA ++ V +DL +G
Sbjct: 449 VNALSKMPFADDVRNFSFASLETLINKKGEVVTDHPYLPTDEQMEAMEHFVDAMDLMDAG 508
Query: 447 K 447
+
Sbjct: 509 E 509
>gi|358337029|dbj|GAA55452.1| ATP-dependent DNA helicase 2 subunit 2, partial [Clonorchis
sinensis]
Length = 1241
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 224/484 (46%), Gaps = 65/484 (13%)
Query: 36 KLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLP-QGTC 94
K G+ E V+L GTE T+N L E G + H+ +++ + +D L++ T
Sbjct: 6 KFFQGEKEEFAVVLCGTEATDNGLADEDGNFVHISLVRALAPLDWDLLEFFNSESLLSTN 65
Query: 95 AGDFLDAIVVGVDMLIKKYGETYKG--KKHLCLITDALCPLKDPDVG--TKEDQVSTIAR 150
D +DA++VGV+ L+ + + KG +K + LI++ L P + +++ +
Sbjct: 66 DADVVDALIVGVNHLVTQCKDR-KGLSEKRILLISNLLGPADISQLTEVAHNLRIADVKL 124
Query: 151 QMVAFGLRMKNI---VVRASLS-------------GEPHMRVIIENDNLLNIFSKKSSAK 194
++ F L + RA LS G+P +V + +++S+ +
Sbjct: 125 SLIGFSLPEGSAPPESERAVLSPNSHPGPSSSRTNGDPQFKVHPAQKAIGDLWSQLNGES 184
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
F ++ +L +TR ++ ++ D ++ + + + V + + E + P L +
Sbjct: 185 YTFDEAIPAL-AYFETRAVAQRG-WKVDFQIGDSLSLPVEGFTQVREARPPALTQLYAAC 242
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
PST ++ Y + ++ + + Q I+G+RYG +VP ++ + AV+ EK
Sbjct: 243 PST------PIRAITTYCTQDENATELQSTQVIRGHRYGNTMVPFTAEDKAAVQPAGEKC 296
Query: 315 VKLLGFTDASNILRHYYMKD-VNLFIAE-PG-NSRATVAVSALARAMKEMNKVAIVRCVW 371
+ L+GFT ASN+ + ++ D V +F+A P N ++ALA+A+ E+N VA+VR V+
Sbjct: 297 LTLIGFTPASNVPINLHLGDSVLVFVANCPAENHPVAQGLAALAQALFELNGVALVRRVY 356
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF------SKF---PVS 422
+ + +GVL P V + ++ L FA+DVR FQFPS SK P
Sbjct: 357 NR-VSAPRLGVLIPEVR---GTQVALFYTDLAFADDVRTFQFPSLPLRTTPSKSHVKPDR 412
Query: 423 WQPNEQQQEAADNLVKML-------------------DLAPSGKGEILQPELTPNPALEV 463
P ++Q +A D V L D A G ++PE P+P ++
Sbjct: 413 HTPTDEQLKAMDEFVSSLILGKMSDEDDSDAECNERQDEANFGLALDVKPEQLPSPWIQR 472
Query: 464 LNIC 467
L C
Sbjct: 473 LFTC 476
>gi|318054306|gb|ADV35595.1| X-ray repair complementing defective repair 5, partial [Brachionus
ibericus]
Length = 674
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 228/492 (46%), Gaps = 54/492 (10%)
Query: 7 ALLLLLDVSPSMHS-------VLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
L+L+LDV +M + L + ++Q+K+ E+G+ +FG ++T+NEL
Sbjct: 5 GLVLVLDVGETMSTKINRTTTYLQSCVDIIQMIVQRKMFQSSKDEIGLTVFGCDQTDNEL 64
Query: 60 -TKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKKYG-ET 116
+ HV +++ + +VD ++ +++ + GD LD I+V ++ +T
Sbjct: 65 WDGSSDDFRHVSLVRCLSIVDWEMLDYVQNKIVVSNIRGDVLDGILVALNHFADDQNKKT 124
Query: 117 YKGKKHLCLITDALCPLKD---PDVGTKEDQVSTIARQMVAFGL-----------RMKNI 162
+K K+ + L + C D ++G +ARQ + + K
Sbjct: 125 FKEKRVIVLTDFSSCSNDDFKLKEIG------KNLARQSIRLDVISPFSEDDVNKEEKPN 178
Query: 163 VVRASLSGEPH----MRV-IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI-SPV 216
S S + H M + +E NLLN +++ D T SL + R I S
Sbjct: 179 SETKSNSDDHHSSKQMTIGQVETLNLLNNLCEQAEGCLFSFDETLSLLSTYQARTIKSSG 238
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T ++ + + EK + + K E K P + ++ K + D+ E+K D + +D
Sbjct: 239 TKYQ--MTIGEKFALPIVSLIKCKESK-PEIFRFK-KVFAKDENV--ELKTDRARFTKDD 292
Query: 277 PSKVVPPE-QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD- 334
+ + + + ++YG VPI S + ++K + EK +LGFT + N+ +HY+ D
Sbjct: 293 EQRDLNDKTDTVDAFKYGSTYVPIDS-DTVSLKLEVEKCFNILGFTKSENVHKHYFSGDS 351
Query: 335 VNLFIAEPGN-SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
VN + +P + ++ A + RAM E + IVR V+ + S +G L P V+++
Sbjct: 352 VNQIMPDPSSGAQVEEAFVNMVRAMFEEDVFGIVRKVF-NSRSSPEMGCLIPYVTKETTC 410
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA---PSGKGEI 450
FY + LPF +D+++ +FS ++PN++Q D+L+ LDL+ + E+
Sbjct: 411 L--FYLS-LPFDDDLKKITLENFSIMK-KFKPNDKQLSLVDDLIDSLDLSRKIDQDEEEL 466
Query: 451 LQPELTPNPALE 462
P T NP ++
Sbjct: 467 YDPHTTFNPYIQ 478
>gi|440475797|gb|ELQ44459.1| hypothetical protein OOU_Y34scaffold00087g37 [Magnaporthe oryzae
Y34]
gi|440486397|gb|ELQ66269.1| hypothetical protein OOW_P131scaffold00411g3 [Magnaporthe oryzae
P131]
Length = 750
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 210/487 (43%), Gaps = 58/487 (11%)
Query: 13 DVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVK 70
D+ SM V +KLC+ + K +VGV+ T+ T+N L + G GY ++
Sbjct: 28 DLDWSMRYVW---DKLCTTTAASR----KTWQVGVVGVRTDVTDNPL-DDAGEKGYNNIS 79
Query: 71 VLQDIKVVDGHLVQSL--KHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITD 128
VLQ++ + ++ L K +P T GD + AIVV + M+ + + K K+ + L+TD
Sbjct: 80 VLQNVAPMTLSALKLLQDKLVPSSTSDGDVVSAIVVAIAMIDEAAPQRLKYKRKIVLVTD 139
Query: 129 ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 188
+ DVG +++ + ++ G+ + E ++ N+ LL S
Sbjct: 140 GQGAIDGDDVGDIARRINELNIEITIIGVDFDD--PEYPFKEEDKSQLKARNEKLLKSIS 197
Query: 189 K--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE-------KMKIKVWVYKKT 239
K S +++ L R + P F G L L + + I V Y KT
Sbjct: 198 TECKESVYGTMIEAVDELDTPR-IKSTKPYKSFDGQLTLGDPETYKESALSIHVERYFKT 256
Query: 240 GEEKFPT-----LKKYSDKAPSTDKFAT--------HEVKVDYEYKSVEDPS-----KVV 281
+ + T +K +D S F ++K YK V DP + V
Sbjct: 257 KQARPITASNVMVKSETDATQSGQDFEGGDGAGGQFADLKTARNYK-VLDPDAPGGKRDV 315
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT--DASNILRHYYMKDVNLFI 339
P ++ +GY YG VP+ +E+ K + +KS ++GF + R M + ++
Sbjct: 316 PQDELARGYLYGRTAVPMPESEFNITKLETKKSFTIIGFIAWEKKKYERFLNMGESSVIF 375
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 399
A N + +A SAL A+ E + R V + G++ ++ +L P++ I + Y
Sbjct: 376 ASKFNEKDELAFSALVNALYETESYGVARLVAKDGKEPQLL-LLMPHIDTDI---ECLYD 431
Query: 400 NVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKGEI 450
LPFAED+R +QFP K P+++ +EA + V +D++ +G +
Sbjct: 432 VPLPFAEDIRYYQFPPLDKVVTLGGQTLTKHRLLPSDELEEAMSDYVDAMDISAAGGDDE 491
Query: 451 LQPELTP 457
E P
Sbjct: 492 EAQEYAP 498
>gi|449550383|gb|EMD41347.1| hypothetical protein CERSUDRAFT_146244 [Ceriporiopsis subvermispora
B]
Length = 830
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 224/529 (42%), Gaps = 84/529 (15%)
Query: 9 LLLLDVSPSMHSV----LPD--------VE--------KLCSRLIQKKLIYG-KNHEVGV 47
+ L+DVSPSM + +PD VE + +Q+ + +G K + G+
Sbjct: 12 MFLVDVSPSMGKIREVEVPDGANGESMTVEMTNLEYALQFVKLKVQEMIYHGRKTEQCGL 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
ILFGT++T+N + ++ GGYEHV I D + + + GD +DA++VG++
Sbjct: 72 ILFGTDDTDNTVNEKNGGYEHVSEYIPILQPDVRTLAKISGIEPSETTGDAIDALIVGIE 131
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRAS 167
+ + + LITD P++ D +++ + + G+ + +
Sbjct: 132 TQQEYLERKPSWTRKIVLITDGESPIEIEDWEATVSKMNALKISLTVVGVDFDDDELPFH 191
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSS----AKTLFVDSTTSLRGARKTRDISPVTIFR-GD 222
G+ ++ N++ + F+ K F + ++ + V + R GD
Sbjct: 192 EQGKSDIKRT--NESFYHTFTSKLERGVVGNAEFALQELARPEIKQVKSQPSVFVLRVGD 249
Query: 223 LELSEKMKIKVWV--YKKTGEEKFPTLKKYSDKAPSTD------KFATHEVKV------- 267
+E + I+++V YK T + P++K+++ + D + E KV
Sbjct: 250 VESRAEEAIEIYVKTYKYTAKASLPSIKRFARRVKGDDEDESRMQLDDDEDKVIWTQLAR 309
Query: 268 -----------------DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D E + D + V E+ ++G++YG VP + K
Sbjct: 310 RTEYFIDRGDGEEDSEGDAEDERKGDALEKVEKEELVRGFKYGASYVPCPDDTFP--KLP 367
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM-KEMNKVAIVRC 369
K +++ GF A + R M +V + + VA+S+L +AM K K AI R
Sbjct: 368 TLKGIEICGFFKAKHFKRWQEMGEVYYVFGDTDKAMQQVALSSLVKAMAKSEEKFAIARW 427
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS------- 422
V + G + VGV+ P E D + +PFA+D+R F F S K VS
Sbjct: 428 VKKDGGEP-KVGVMWPMTIE--GQMDYLMWVQMPFADDIRNFPFGSLDKL-VSKTNNTVT 483
Query: 423 ---WQPNEQQQEAADNLVKMLDLAPSG-KGEILQPE------LTPNPAL 461
+ P ++Q+ A D V +DL +G K E + E L+ NPAL
Sbjct: 484 SHPYLPTKEQESAMDRFVDEMDLMNAGEKNEEGEREPWFDVRLSYNPAL 532
>gi|320164326|gb|EFW41225.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 699
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 16/212 (7%)
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
EV+ + Y ED V E + Y+YG +P SS + +K K + +LGFT A
Sbjct: 247 EVRRETSYFLQEDEETEVQKEDITRAYKYGKDFIPWSSVDESTMKLSSHKCLSVLGFTAA 306
Query: 324 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
SNI R M + +PG++ A+ A+SA A+AM VAIVR V+R+ +V +G L
Sbjct: 307 SNIPRQLLMGGAVAVVPQPGDAVASKALSAFAQAMVLQKSVAIVRYVFREN-ANVRLGCL 365
Query: 384 TPNVSEKINIPDSFY--FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
P +S + FY +N LPFAED+RE+ F + + + P+ +Q + D L+ LD
Sbjct: 366 HPVIS-----AEHFYLLYNSLPFAEDMREYPFTTLHQ--KRYMPSAEQLKVVDGLIDKLD 418
Query: 442 LAPS------GKGEILQPELTPNPALEVLNIC 467
L + + L P+L+ NP L+ + C
Sbjct: 419 LTMAYHDQEGNAMDALHPKLSFNPVLQRVYQC 450
>gi|395823741|ref|XP_003785139.1| PREDICTED: X-ray repair cross-complementing protein 5 [Otolemur
garnettii]
Length = 755
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 221/484 (45%), Gaps = 63/484 (13%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR ++ A++L +DV +M + P E K+ + IQ+++ E+ ++LFG
Sbjct: 1 MARPGSKAAVVLCMDVGFAMGNSYPGEESPFEQAKKVITMFIQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L + Y+++ V + +++ D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTKNALA-DGDQYQNITVHRHLRLPDFDLLEDIESKIQPGSQQADFLDALIVCMDVIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCP------------LKDPDVGTK---------EDQVSTI 148
++ G+ ++ K+H+ + TD P LK D+ + ED +
Sbjct: 120 RETVGKKFE-KRHIEVFTDLSSPFSKDQLDIIMHNLKKSDISLQFFLPFPIGDEDGIGDR 178
Query: 149 ARQMVAFGLRM-----KNIVVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDS 200
+ R K I + + RV++ D L I+S S + L V
Sbjct: 179 GEGDLCLDHRGPSFPPKGITEQQKEGIQMVKRVMMFLDGKDGLDEIYSFSDSLRQLCVFK 238
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
S R P + L + + I++ YK E D
Sbjct: 239 KIS-------RSSMPWSCL---LTIGSNLSIRIVAYKSMLHENVKKTWTVVD----ARTL 284
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLG 319
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LG
Sbjct: 285 KKEDIQKETVYCLNDDDETEVLKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLG 344
Query: 320 FTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F +S + R ++M + L + A + A VA+S+L A+ E++ AIVR + + + +
Sbjct: 345 FCRSSQVQRKFFMGNQVLKVFAAKADEAAAVALSSLIHALDELDMAAIVRYTYDR-RANP 403
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
VGV P++ + + + LPF ED+R++ FPS K + P E+Q A D L+
Sbjct: 404 QVGVAFPHIKDAY---ECLVYVQLPFMEDLRQYMFPSL-KNNKKYTPTEEQLSAVDALID 459
Query: 439 MLDL 442
+ L
Sbjct: 460 SMSL 463
>gi|403266933|ref|XP_003925612.1| PREDICTED: X-ray repair cross-complementing protein 5 [Saimiri
boliviensis boliviensis]
Length = 732
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 223/510 (43%), Gaps = 68/510 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSFPGEESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM----- 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 109 ----LIKKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 123 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLDKEDGSGDRGDGP 182
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 183 FLLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV-----F 237
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + P L + + I++ YK +E+ D +
Sbjct: 238 KKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKED 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
++ + Y +D + E I+G+RYG +VP S + E +K+K E K +LGF +
Sbjct: 289 IQKETVYCLNDDDETEILKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKS 348
Query: 324 SNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 349 SQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALNDLDMVAIVRYAYDK-RANPQVGV 407
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
P++ + + LPF ED+R++ F S K + P E Q A D L+ + L
Sbjct: 408 AFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSL 463
Query: 443 APSGKG-----EILQPELTPNPALEVLNIC 467
A + ++ PNP + L C
Sbjct: 464 AKKDEKTNTLEDMFPTTKIPNPRFQRLFQC 493
>gi|256086585|ref|XP_002579478.1| ku P80 DNA helicase [Schistosoma mansoni]
gi|353229680|emb|CCD75851.1| putative ku P80 DNA helicase [Schistosoma mansoni]
Length = 833
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 214/473 (45%), Gaps = 56/473 (11%)
Query: 7 ALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGY 66
AL ++LDV M+ + + L++KK EV +IL G++ T+N L E G +
Sbjct: 4 ALGVVLDVGIHMNPNFREAVECVRLLLEKKFFAESKDEVALILCGSDATDNALADEEGSF 63
Query: 67 EHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK-KHLCL 125
+++ + ++ + +++ L GD +DA++VG D L + K KHL L
Sbjct: 64 QNICLAFELAPISWKVLEFLDPELLSLSTGDVVDALMVGADHLFNRCKNKKNIKEKHLLL 123
Query: 126 ITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---------------VRASLSG 170
+++ + D DV + + + + G +K + V L
Sbjct: 124 VSNLYGSVDDSDVSRVSESLQSSGIKFSLIGCDLKKSINVTPENRDEPGPSHAVSHHLHH 183
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG---DLELSE 227
P R I L ++ + + F D+ T+L +TR + + RG L++ +
Sbjct: 184 SPKTRPSIS--FLAELWDQLNGESYDFSDAVTAL-SIFETRSV----LQRGWNVSLQIGD 236
Query: 228 KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE-DPSKVVPPEQR 286
+ I V Y E PT++ P T ++ +Y++ + DP + E
Sbjct: 237 SITIPVVGYTYIKEAHPPTMRIMYAPDP------TLPLRAVTKYRTQDPDPCDLNSSEV- 289
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEP--- 342
+GYRYG VVP + ++K EK ++GFT A NI ++Y + V +F+A+
Sbjct: 290 TRGYRYGGTVVPFGEEDMASIKPPSEKCFSVIGFTSADNIPHNFYTGESVLVFVAQSVKQ 349
Query: 343 ------GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPD 395
A++ALA+A+ E++ VA+VR V+ Q + +GVLTP + ++I
Sbjct: 350 SEDDVTNRPSCPTALAALAQALYEVSGVALVRRVYNQ-PSAARLGVLTPEIHGDQI---- 404
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA---ADNLVKMLDLAPS 445
S + + F+ED+R+ + PS PVS +P+ E + N +K+ PS
Sbjct: 405 SLMYTDIAFSEDIRDLKLPS---LPVSCEPSTSTTECFVKSSNTMKLSKNCPS 454
>gi|395326369|gb|EJF58779.1| SPOC domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 840
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 205/501 (40%), Gaps = 75/501 (14%)
Query: 26 EKLC--SRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLV 83
E +C RL+ + K + GVILFG+EET N + GGYEHV I + +
Sbjct: 47 EMVCPTRRLVTQIFNGRKTDKCGVILFGSEETNNMINDANGGYEHVAEYIPIAQPNSATL 106
Query: 84 QSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKED 143
L L T +GD +DA++V ++ + G + + ++TD P++ ED
Sbjct: 107 AKLAALEPSTVSGDPIDALIVAIETQDQYLGNKKTWTRKVVILTDGESPIE------VED 160
Query: 144 QVSTIARQMVAFGLRMKNIVVRAS-----LSGEPHMRVIIENDNLLNIFSKKSSAKTL-- 196
+T+ + M A + + + V E + +N+ F+ K A +
Sbjct: 161 WEATVNK-MNALDISLTVVGVDFDDDDLPFHEEDKSNIKQKNEAFYRTFTSKLHAGVVGN 219
Query: 197 --FVDSTTSLRGARKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYS 251
+ S R+ + T+ R GD ++ E ++I V K T + + K++
Sbjct: 220 CDYALQEISRPDVRQVKSTLMGTVLRIGDTQVRPEEAIEISVKTSKCTALARPKSWKRFG 279
Query: 252 DKAP------------------STDKFATHEVKVDY-----------EYKSVEDPSKVVP 282
+ P T F ++ Y E K +D +V
Sbjct: 280 RRKPLAAGKDKEKHKDAMDEDEQTMTFVQLRMRTAYYLEQNKGSKAEEKKEKDDLKNLVK 339
Query: 283 --PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
E+ ++GY+YG +P++ + + K + + GF N R M +V A
Sbjct: 340 VQKEELVRGYKYGATFLPVADGGYP--RLHTRKGIDICGFFQKKNFRRELEMGEVYYVWA 397
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN----IPDS 396
+P N VA+S++ +AM E +AI R V + +GVL P+V E+++ +
Sbjct: 398 DPANPMQQVALSSIVQAMYEKGVMAIARWV-SKDDMDPKMGVLYPSVFEEVDCLLWVQVC 456
Query: 397 FYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGK 447
N +PFA+D+R F F S + P +Q +A + V +DL+ +G+
Sbjct: 457 GSLNAMPFADDIRNFPFASLETLINKKGEVVTEHPYLPTNEQMDAMEQFVDAMDLSDAGE 516
Query: 448 GE-------ILQPELTPNPAL 461
+ L+ NPA+
Sbjct: 517 KDEEGNREPWFDTRLSYNPAI 537
>gi|346971582|gb|EGY15034.1| Ku80 [Verticillium dahliae VdLs.17]
Length = 726
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 197/448 (43%), Gaps = 58/448 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K VGV+ T+ET + L E GYE++ +LQ+I + + ++ L+ + P T GD
Sbjct: 49 KTWTVGVVGLKTDETRHLLQDE-EGYENISILQEIGPMSMNSLKELQDVIVPSETHTGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AIV+ VDM+ +KY + K + + LITD P+ D ED I + +
Sbjct: 108 VSAIVIAVDMM-EKYTKALKYARKIYLITDGTGPIDGDDF---EDITKKINHDGIEL-IE 162
Query: 159 MKNIVVRASLSGEPHMR-------VIIENDNLL-NIFSKKSSAKTLFVDSTTSLRGARKT 210
++AS PH + EN+ LL ++ SK A+ + +
Sbjct: 163 EDKPSLKAS-QPRPHSDESGTNSFLKKENERLLKDLVSKCKDAQLATIAEAIDELDTPRL 221
Query: 211 RDISPVTIFRGDLELSE--------KMKIKVWVYKKTGEEKFP---TLKKYSDKAPST-- 257
+ + P + G L L + M I V Y KT + P T+ ++ PS
Sbjct: 222 KPVRPYKSYDGPLTLGDVKDPKHPSPMVINVERYFKTKLTRPPPASTVVLRTEPGPSQAA 281
Query: 258 ---------DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAE 303
++ YK V DP + V + KGY YG V IS +E
Sbjct: 282 EGEGMEGVESSLNFGAIRQARSYK-VNDPDAPGGKRDVEFDSLAKGYEYGRTAVHISESE 340
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
W K + K+ +++GF A M + + ++ + ++ +A+S+L A+ E++
Sbjct: 341 WNMTKIETTKAFEIVGFIPADKFEPFLSMGESCITVSRKHDDKSQLALSSLIHALYELSS 400
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVS 422
A+ R V + G++ ++ +L P + + + Y LPFAEDVR +QFP + VS
Sbjct: 401 YAVARIVLKDGKEPQLI-LLAPGIEPDL---ECLYDVPLPFAEDVRSYQFPPLDRVVTVS 456
Query: 423 WQ--------PNEQQQEAADNLVKMLDL 442
Q P+++ +A + V +DL
Sbjct: 457 GQTLTKHRLIPDDELNDAMSDFVDAMDL 484
>gi|358368662|dbj|GAA85278.1| ATP-dependent DNA helicase II subunit 2 [Aspergillus kawachii IFO
4308]
Length = 712
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 193/439 (43%), Gaps = 60/439 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
+GV+ T++T NEL + Y H+ VL IK ++SL P T GD + A+
Sbjct: 53 IGVLGLRTDDTANELEDD-PDYSHISVLSGIKQFLMPDIRSLSDRIKPSKTNKGDAISAL 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----QMV 153
V+ + M+I + + K K+ + L+T+ P+ ++ KED + I
Sbjct: 112 VLAIQMIITQC-KKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFDDP 170
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
+G++ ++ R + EN+ LL ++ ++ + + +
Sbjct: 171 DYGVKEEDKDPRKA-----------ENEALLRSLAEDCDGAYGTLEQAVAELETPRVKST 219
Query: 214 SPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDK---------APSTD 258
F+G L+L ++I V Y +T K P+ +++ + A S D
Sbjct: 220 RITASFKGHLQLGNPAEYDTAVRIPVERYYRTYVAKAPSASQFTVRNEEEMEAAGAGSQD 279
Query: 259 KFATHEVKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
+ V+ Y+ + ED V +Q KGY YG +VPIS + + +
Sbjct: 280 GSSLVGVRNSRSYQIDDGTTEDGVTTVDRDQLAKGYEYGRTLVPISETDENITTLETFAA 339
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+ R V ++
Sbjct: 340 IELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAVARMVLKEN 399
Query: 375 QQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------- 424
+ V+V VL P++ PD LPFAEDVR ++FP + VS +
Sbjct: 400 KPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVVTVSGKVVTQHRN 453
Query: 425 -PNEQQQEAADNLVKMLDL 442
P++ A D VK ++L
Sbjct: 454 LPSDDLLNAMDKYVKSMEL 472
>gi|317030003|ref|XP_001391676.2| ATP-dependent DNA helicase II subunit 2 [Aspergillus niger CBS
513.88]
Length = 714
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 192/449 (42%), Gaps = 76/449 (16%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GV+ T+ET NEL + Y H+ VL IK L+ ++ L P T GD +
Sbjct: 53 IGVLGLRTDETANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR---- 150
A+V+ + M+I + + K K+ + L+T+ P+ ++ KED + I
Sbjct: 109 SALVLAIQMIITQC-KKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDF 167
Query: 151 QMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
+G++ ++ R + EN+ LL ++ ++ + +
Sbjct: 168 DDPEYGVKEEDKDPRKA-----------ENETLLRSLAEDCEGAYGTLEQAVAELETPRV 216
Query: 211 RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE------ 264
+ F+G L+L + V + E++ + Y KAPS +F
Sbjct: 217 KTTRITASFKGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNEEEMGM 272
Query: 265 ---------------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
V+ + Y+ + E+ + V EQ KGY YG +VPIS +
Sbjct: 273 AAAAAGSQEGSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPISETDEN 332
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
+ +++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A
Sbjct: 333 ITTLETFAAIELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYA 392
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVS 422
+ R V ++ + V+V VL P++ PD LPFAEDVR ++FP + VS
Sbjct: 393 VARMVLKENKPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVITVS 446
Query: 423 WQ--------PNEQQQEAADNLVKMLDLA 443
+ PN+ A D VK ++L
Sbjct: 447 GKVVTQHRNLPNDDLLNAMDKYVKSMELT 475
>gi|332815405|ref|XP_001151873.2| PREDICTED: X-ray repair cross-complementing protein 5 isoform 7
[Pan troglodytes]
Length = 827
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 225/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI-----VVGVDM 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA+ V+ +
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 217
Query: 109 LIKKYGETYK----------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
+ KK+ + + K L +I +L C + K+ G + D
Sbjct: 218 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 277
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ F L+ + L + + +E D L I+S S + L V
Sbjct: 278 FRLGGHGPCFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV------ 331
Query: 205 RGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ I +I + L + + I++ YK +E+ D
Sbjct: 332 -----FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 382
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 383 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 442
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 443 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 501
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 502 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 557
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 558 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 588
>gi|116192145|ref|XP_001221885.1| hypothetical protein CHGG_05790 [Chaetomium globosum CBS 148.51]
gi|121786374|sp|Q2H6C5.1|KU80_CHAGB RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|88181703|gb|EAQ89171.1| hypothetical protein CHGG_05790 [Chaetomium globosum CBS 148.51]
Length = 736
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 201/478 (42%), Gaps = 68/478 (14%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHLPQG--TCAGD 97
K +GV+ TEET N E + GYEH+ VLQDI + ++ L+ Q T GD
Sbjct: 49 KTWTLGVVGLNTEETNNAQDSEGLEGYEHISVLQDIGPMTMTQLRELRSSIQTSHTYGGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ IVV + M I+ + + K + + L+T+ P+ D ++++ +++ G+
Sbjct: 109 AISGIVVALAM-IELFTKKLKYNRRIILVTNGESPIDDESSEDVANRLNYSNIELIVIGV 167
Query: 158 RMKNIVV--------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ + E +R ++E N + + + + L + +
Sbjct: 168 DFDDADYGFKEEDKSKGKARNEKTLRKLVEQCNNGVFGTMQQAVEELAIP---------R 218
Query: 210 TRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFP-----TLKKYSDKAPSTD 258
+ + P + G L L + + I V Y KT P + A ++
Sbjct: 219 IKPVRPFKAYDGALTLGDPEKYKSALSIHVERYFKTKRAPAPPASTVVVNSEPGGASQSE 278
Query: 259 KFATHEVKVDYEYKSVE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWE 305
D E+ V+ DP + V E KGY+YG VVP S +++
Sbjct: 279 TLNEDTEMGDAEFSGVKHMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDFS 338
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
K + +KS +LGF S+ + + + +A+ N A + +SAL A+ E+ A
Sbjct: 339 ITKLETKKSFTILGFIPFSSYNPFLNLGETGIVVAQKHNEEAELGLSALIHALHELESYA 398
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFSK-FPV 421
+ R V + G Q +V +L PN + I D F Y LPFAED+R +QFP K V
Sbjct: 399 VARYVQKDGAQPQLV-LLKPNPA----IEDDFECLYDVPLPFAEDLRSYQFPPLDKVLTV 453
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
+ P+E ++A + V +DL+ E +P E P NP + +N
Sbjct: 454 TGNIIKEHRLLPSEDLKQAMSDFVDAMDLSGFDVDEDGKPTEYAPIDETYNPTIHRMN 511
>gi|397491845|ref|XP_003816850.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Pan
paniscus]
Length = 720
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 225/511 (44%), Gaps = 70/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI-----VVGVDM 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA+ V+ +
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 217
Query: 109 LIKKYGETYK----------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
+ KK+ + + K L +I +L C + K+ G + D
Sbjct: 218 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 277
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ F L+ + L + + +E D L I+S S + L V
Sbjct: 278 FRLGGHGPCFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV------ 331
Query: 205 RGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ I +I + L + + I++ YK +E+ D
Sbjct: 332 -----FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 382
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 383 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 442
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 443 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 501
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 502 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 557
Query: 442 LAPSGKG-----EILQPELTPNPALEVLNIC 467
LA + ++ PNP + L C
Sbjct: 558 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 588
>gi|408398938|gb|EKJ78063.1| Ku70 [Fusarium pseudograminearum CS3096]
Length = 714
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 201/462 (43%), Gaps = 51/462 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T++T N+L + GYE++ VLQ++ + ++ L+ + P T AGD + AI
Sbjct: 53 VGVLGLRTDDTYNKLQDD-DGYENITVLQEMGSMTMSSLRDLQSVVKPSNTWAGDAVSAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV VDM+ + + K + + LITD P+ D+ +++ Q+ G+ +
Sbjct: 112 VVAVDMM-DTFTKKLKWNRKIFLITDGQGPMDGDDLSDISKKINDSNIQLTILGVDFDDP 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFR 220
+P + +N+ L + K ++ L R + + P +
Sbjct: 171 DYGFKEEDKPGTKE--DNEKALKALADDCKDGVFANIAEAIDELDTPR-IKAVKPYKTYD 227
Query: 221 GDLELSE------KMKIKVWVYKKTGEEK---FPTLKKYSDKAPSTDKFATHE------- 264
G L L + M I V Y KT + T+ S+ +T + E
Sbjct: 228 GALTLGDPETFPAAMSINVERYFKTHLARPLTASTVVVKSEDGEATQQTQDDEMEGIEFS 287
Query: 265 -VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 318
VK YK V DP + V + KGY YG V IS +E K +KS ++
Sbjct: 288 AVKQARSYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEHNITKIDAQKSFSII 346
Query: 319 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
GF + + + + IA ++++ +A+S+L A+ E+ AI R V + G+ +
Sbjct: 347 GFIPCAKYEPFLNIGETCVTIARKFDAKSAIALSSLVWALSELESYAIARIVTKDGKDPL 406
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQ 429
+V +L P V + + Y LPFAED+R +QFP + V+ Q P ++
Sbjct: 407 LV-LLAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVTGQTVSKHRLLPTDEL 462
Query: 430 QEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
+A + V +DL+ G + P E P NP + +N
Sbjct: 463 NDAMSDYVDAMDLSTYGMDDDGNPSEYVPIDETFNPTVHRVN 504
>gi|350635711|gb|EHA24072.1| hypothetical protein ASPNIDRAFT_180705 [Aspergillus niger ATCC
1015]
Length = 724
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 194/455 (42%), Gaps = 78/455 (17%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GV+ T++T NEL + Y H+ VL IK L+ ++ L P T GD +
Sbjct: 53 IGVLGLRTDDTANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
A+V+ + M+I + + K K+ + L+T+ P+ D +S I +++ + +
Sbjct: 109 SALVLAIQMIITQ-CKKLKYKRRIVLVTNGQGPMN-------PDNLSEITKKIKEDNIEL 160
Query: 160 KNIVVRASLS-------GEPHMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSL 204
++V L+ +P V EN+ LL ++ ++ +
Sbjct: 161 IILLVTGVLTCCRGPDFDDPEYGVKEEDKDPRKAENETLLRSLAEDCDGAYGTLEQAVAE 220
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + F+G L+L + V + E++ + Y KAPS +F
Sbjct: 221 LETPRVKTTRITASFKGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRN 276
Query: 265 ---------------------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPI 299
V+ + Y+ + E+ + V EQ KGY YG +VPI
Sbjct: 277 EEEMGMAAAAAGSQEGSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPI 336
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
S + + +++LLGF + R+ +M N+ IA+ N +A +A+S+ A+
Sbjct: 337 SETDENITTLETFAAIELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALF 396
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFS 417
E+ A+ R V ++ + V+V VL P++ PD LPFAEDVR ++FP
Sbjct: 397 ELESYAVARMVLKENKPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLD 450
Query: 418 K-FPVSWQ--------PNEQQQEAADNLVKMLDLA 443
+ VS + PN+ A D VK ++L
Sbjct: 451 RVITVSGKVVTQHRNLPNDDLLNAMDKYVKSMELT 485
>gi|410223938|gb|JAA09188.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
gi|410261912|gb|JAA18922.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
gi|410342867|gb|JAA40380.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
Length = 732
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 223/510 (43%), Gaps = 68/510 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 6 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI-----VVGVDM 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA+ V+ +
Sbjct: 66 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 122
Query: 109 LIKKYGETYK----------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
+ KK+ + + K L +I +L C + K+ G + D
Sbjct: 123 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 182
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ F L+ + L + + +E D L I+S S + L V
Sbjct: 183 FRLGGHGPCFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV-----F 237
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + P L + + I++ YK +E+ D +
Sbjct: 238 KKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKED 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +
Sbjct: 289 IQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKS 348
Query: 324 SNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 349 SQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGV 407
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
P++ + + LPF ED+R++ F S K + P E Q A D L+ + L
Sbjct: 408 AFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSL 463
Query: 443 APSGKG-----EILQPELTPNPALEVLNIC 467
A + ++ PNP + L C
Sbjct: 464 AKKDEKTDTLEDLFPTTKIPNPRFQRLFQC 493
>gi|361124310|gb|EHK96413.1| putative ATP-dependent DNA helicase II subunit 2 [Glarea lozoyensis
74030]
Length = 679
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 203/454 (44%), Gaps = 76/454 (16%)
Query: 45 VGVILFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGD 97
VGV+ T+E+EN L + G Y+H+ V +++ + + SL K +P T AGD
Sbjct: 54 VGVLGLRTDESENSLYNDDDGPEDESYQHIAVHKELGPITLSDLGSLQEKLVPSQTEAGD 113
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVS----TIA 149
+ AIVV ++M+ K G+ K + + L+TD + + D DQ++ +
Sbjct: 114 AVSAIVVAIEMVNKFTTLGTGKPAKSGRKIVLVTDGQGYIDNTDPNNL-DQIALRCNELG 172
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGA 207
+++ G+ ++ E EN+ LL + + + T+ +++ +L G
Sbjct: 173 IELIVLGIDFDDL--DYGFKEEDKSEQKRENEALLKSLTDQCNKGTIATLIEAIDNL-GV 229
Query: 208 RKTRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
+ + + P F G L L + K I V Y KT KK S APS F
Sbjct: 230 PEIKSVRPYKAFGGRLALGDYEKYPETALYIDVLRYTKT--------KKAS--APSASSF 279
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
+ KS + V + KGY YG V IS+AE K + ++GF
Sbjct: 280 VNN--------KSAR--KRDVDRDDLAKGYEYGRTAVHISAAEENVTKMDTYEGFSIIGF 329
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + R+ M + + +A+ N +A VA+S+L A+ E++ A+ R V + ++ ++
Sbjct: 330 VPSESFERYLVMGESCMTVAQSVNEKAVVALSSLIHALHELDSYAVARIVLKDMKEPKII 389
Query: 381 ---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
V+ P+ ++P LPFAEDVR + P+++ +A ++ V
Sbjct: 390 LLAPVIEPDFEGLADVP-------LPFAEDVR------------IYLPSDELTDAMEDYV 430
Query: 438 KMLDLAPSGKGEILQP------ELTPNPALEVLN 465
+DL+ GKGE +P E T +P + +N
Sbjct: 431 DAMDLSTFGKGEDGEPIEYMTMEETYSPTVHRIN 464
>gi|170595344|ref|XP_001902342.1| Ku70/Ku80 beta-barrel domain containing protein [Brugia malayi]
gi|158590032|gb|EDP28811.1| Ku70/Ku80 beta-barrel domain containing protein [Brugia malayi]
Length = 565
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 205/483 (42%), Gaps = 58/483 (12%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
+I +K+ + ++LFG+E T+N +T + + +V+ +Q K+ D + P
Sbjct: 50 IITRKIFTESVDKFTLMLFGSEVTQNPITTDENIFFYVEEMQQAKI-DWLRFIDKEIKPS 108
Query: 92 GTCAGDFLDAIVVGVDML---IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 148
+ GDFL A++ +D + ++ Y E+ +++ L+T+ L D E+ + TI
Sbjct: 109 KSTNGDFLSALIAALDYMRNHLENYPESNITVRNILLVTN----LGGFDGNMDEECIETI 164
Query: 149 ARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS----------AKTLFV 198
M A + + +P +I ++ + + K S A+ +
Sbjct: 165 INGMKALEINFNVVGPSFGKLSKPKDEIISTEESAIELEESKLSNTTQSFKMEPAERILT 224
Query: 199 DSTTSLRGARKT---------RDISPVTIFRGD---LELSEKMKIKVWVYKKT------- 239
D T G + R + RG LEL K+ + +YKK
Sbjct: 225 DILTQTDGVIYSFAEALPVLQRFVPRKVKVRGQKFYLELGIDFKLPLQMYKKIQPANFKL 284
Query: 240 GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED-----PSKVVPPEQRIKGYRYGP 294
+K+ ++ K + + + KVD S + S + EQ IKGY++G
Sbjct: 285 ATQKYASITDVQLKRKTVYEKCVKDEKVDDGDGSADSNLSQGSSSKISKEQTIKGYKFGT 344
Query: 295 QVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR-ATVAVS 352
+VP + + + +KPE + +KL+ F S IL HY M + P R A +A+S
Sbjct: 345 TIVPYNEEDQKEYGWKPENRCLKLIQFAKRSQILEHYMMDGGACYFIPPALDRSACIAIS 404
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
AL AM + VA+ R V+ ++G+ + D F LPF ED R
Sbjct: 405 ALVNAMIAEDSVALTRYVYSAASHPRIMGLFPRRSKRGV---DMFVGIKLPFYEDFRGLD 461
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDL------APSGK-GEILQPELTPNPALEVLN 465
FP + P + +P +A LV+ +DL + +G+ E L+P PNP L+ N
Sbjct: 462 FPQLNS-PTT-EPKSDDLKAMHALVEAMDLTKAHFNSETGQFEESLRPRDVPNPKLQ--N 517
Query: 466 ICG 468
+C
Sbjct: 518 VCN 520
>gi|392596993|gb|EIW86315.1| SPOC domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 822
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 215/491 (43%), Gaps = 70/491 (14%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ + +G K + GVI+FG+++T N + ++ GGY+HV I + + L L
Sbjct: 56 IQDMIFHGRKTEQCGVIIFGSDDTHNVVNEKNGGYDHVTEFIPIGQPNATTLAKLDTLKP 115
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
+GD +DA++V ++ + + + + L+TD P++ D +++ +
Sbjct: 116 SETSGDPIDALIVAIETQDQYLEKKRTWTRKIVLLTDGKNPMEIEDWEATVHKMNALHIS 175
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKK-SSAKTLFVDSTTSLRGARKT 210
+ G+ + + G+ +++ EN+ F+ S+ + + R +
Sbjct: 176 LDVVGIDFDDEEIGYQEEGKKNIK--FENEAFYAKFTSSLSNGEVGTFEKALQERYRPEP 233
Query: 211 RDISPV---TIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSD----KAPSTDKF 260
+D T+ R GD+++ E M++ V K T E+ + KK++ K + D+
Sbjct: 234 KDTKSTLMGTMLRLGDVDVRPDEAMEVLVKTSKCTMLERPKSWKKFARRQAVKQDAEDET 293
Query: 261 ATHEVKVDYEYKSV----------------------------------EDPSKVVPPEQR 286
+ +VD + K+V ++ + V EQ
Sbjct: 294 QDVDGQVDEDKKTVFSQLRMRTEYYVDHSESKDDTDDEDNEEGEDVKKKNAPEKVEKEQL 353
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
I+G++YG P ++ K +K + + GF N R + M +V A+P ++
Sbjct: 354 IRGFKYGATYAPCPDGQFP--KLPTKKGIDICGFFHRQNFRRDFSMGEVQYVWADPSSAL 411
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 406
V +S++ +AM + + +AI R V R G +GVL P+ +K+ D + +PFA+
Sbjct: 412 QQVTLSSVVQAMADKDVLAIARWVMRDGADP-KMGVLCPSQFDKV---DCLLWVQMPFAD 467
Query: 407 DVREFQFPSFSKF------PVS---WQPNEQQQEAADNLVKMLDLAPSGKGE---ILQP- 453
DVR++ F P++ + P +Q A +N V +DL +G+ + QP
Sbjct: 468 DVRKYTFAPLEHLVSKKGDPITTHPYLPTSEQMSAMENFVDAMDLMDAGEKDEDGHRQPW 527
Query: 454 ---ELTPNPAL 461
L+ NPA+
Sbjct: 528 FDTRLSYNPAI 538
>gi|452824587|gb|EME31589.1| ATP-dependent DNA helicase 2 subunit 2 isoform 2 [Galdieria
sulphuraria]
Length = 656
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 187/415 (45%), Gaps = 19/415 (4%)
Query: 6 EALLLLLDVSPSMHS-VLPDVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEV 63
EA++L+ D+ ++ + L ++++ + L YG ++ G++ G+ E +N L +
Sbjct: 3 EAIVLVCDIGCTLDAQSLDQLKQVSIAFFLRCLTYGSWRQLFGLVFMGSREPDNHLHNLL 62
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
GGY H+K + + D LV+ D++DAI V D+LI + K + +
Sbjct: 63 GGYTHIKTVVVPERPDISLVKYFYQCQLQGGLSDYIDAICVSSDLLISAVNKK-KLQPRI 121
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
LITD K T+ QV I + +R+ I + L + V I N L
Sbjct: 122 VLITDG----KAEQFFTQ--QVEEILPALKERSIRLDVIGIDDFLEDKMSHSVQISNAAL 175
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 243
L + L + + S T + G L++S ++ V +Y + K
Sbjct: 176 LCRLTDSLDGTALSFKVSMEQLSEPIVKPFSLRTNYSGMLQIS-SVQFPVRLYTYCRDFK 234
Query: 244 FPTLKK--YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
PT + +S+ S + VK + + ED + + PE+ I+G+ YG ++P+S
Sbjct: 235 PPTGNRIFWSESMESGKQVLC--VKETHYFSVQED--RELEPEEMIEGHFYGRSLIPVSP 290
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+ A+ + K +K+LGF + +H M V++ I +P + + +L AM EM
Sbjct: 291 FDLPALSYGAPKCLKVLGFFAKKDFSQHILMSGVDVMIPDPNDEISITYFVSLTEAMLEM 350
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF 416
++VA+ R V R+ S + ++ P++ + + LP ED+R FPS
Sbjct: 351 DRVALCRYV-RRDNTSPALMLMWPHLKSDGIL--CLFLCQLPVLEDIRNHTFPSL 402
>gi|429861179|gb|ELA35879.1| ku family dna [Colletotrichum gloeosporioides Nara gc5]
Length = 727
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 211/480 (43%), Gaps = 67/480 (13%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDF 98
K VGV+ T++T N + + GYE + VLQ++ + ++ LK P GT GD
Sbjct: 49 KTWTVGVVGLKTDDTRNAMQDD-EGYESISVLQELGPMTLTSMRELKEEIKPSGTETGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+V+ VDM I+ + + K K+ + LITD L P+ DV ++++ +++ G+
Sbjct: 108 VSAVVIAVDM-IQTFTKKLKYKRRVYLITDGLGPIDADDVDDIAKKINSDGIELIVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS-------AKTLFVDSTTSLRGAR--K 209
+ +P ++ +N+ +L + K A+ + T L+ R K
Sbjct: 167 FDDAEYGFKEEDKPSIKK--QNEEVLKDLASKCDNGQFATIAEAIDELDTPRLKAVRPYK 224
Query: 210 TRDISPVTIFRGDLELSEKMK-----IKVWVYKKTGEEKFP---TLKKYSDKAP------ 255
T D P+T+ D K+ I V Y KT K P T+ +D +
Sbjct: 225 TYD-GPLTLGHADPPPELKIPPTPVIINVERYFKTKLAKAPGSSTVVVSADPSSQSTHTM 283
Query: 256 ---------STDKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISS 301
ST FA VK YK V DP + V E KGY YG V IS
Sbjct: 284 DAEPMEGVESTAGFAA--VKSARTYK-VNDPDAPGGKRDVEFEALAKGYEYGRTAVAISE 340
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+EW K + K+ ++GF + M + + + + ++ +A+S+L A+ E+
Sbjct: 341 SEWNVTKLETIKTFTIIGFIPSEKYEPFLNMGETCVTVGRKFDEKSQLALSSLIHALYEL 400
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FP 420
A+ R V ++ + ++V +L P + + + Y LPFAEDVR +QFP +
Sbjct: 401 ESYAVARLVIKEKKDPLLV-LLAPRIEPDM---ECLYDIPLPFAEDVRGYQFPPLDQVIT 456
Query: 421 VSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALEVLN 465
VS Q P+++ +A + V +DL G + P + T NP + LN
Sbjct: 457 VSGQKITTNHRLLPSDELTDAMSDYVDSMDLGTFGNDDEGNPSEYAAIDDTYNPIIHRLN 516
>gi|322702143|gb|EFY93891.1| Ku70/Ku80 domain & Ku-core domain containing protein [Metarhizium
acridum CQMa 102]
Length = 646
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 218/521 (41%), Gaps = 67/521 (12%)
Query: 5 REALLLLLDVSPSM---HSVLPDVE---KLCSRLIQKKLIYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + +C + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGASMAQKHSGREESDLDWSMCYVWDKITDIVAANRKTLCVGVVGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKY 113
N+L +E GYE++ V+Q++ + +++L+ P T +GD + AIVV VD LI +
Sbjct: 64 NNKL-QEDDGYENISVIQELSQITMSGLRALQASVKPSETMSGDAVSAIVVAVD-LIDTF 121
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ K + + L+TD + + +++ ++ G+ N +P
Sbjct: 122 TKKLKWVRKIVLVTDGQGEMDADGIEDIAKKINDSGIKLTVLGVDFDNPQYGFKEEDKPP 181
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------ 227
+ E K ++ L R + + P + G L L +
Sbjct: 182 TKAASEKTLKALTDQCKGGIFATMAEAIDELDTPR-VKSVKPYKTYDGALTLGDPEKFPA 240
Query: 228 KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 273
M I V Y KT E+ + + D A +F+ VK YK
Sbjct: 241 AMNINVERYFKTHLARPLTASTVVVKSEQATQSTQTVEDDAMDGIEFSA--VKQARTYK- 297
Query: 274 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
V DP + V E KGY YG V IS +E K + EKS ++GF S
Sbjct: 298 VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESEHNITKLETEKSFSIVGFIPWSKYEP 357
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
M +V + A + ++ +A+S+L A+ E+ A+ R V + G+ ++V ++ P +
Sbjct: 358 FLNMGEVCVTHARKNDIKSELALSSLIWALLELESYAVARIVTKDGKDPLLV-LMAPQLE 416
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKM 439
+ + Y LPFAEDVR +QFP + VS Q P+++ EA + V
Sbjct: 417 LGL---ECLYDIPLPFAEDVRTYQFPPLDRVITVSGQTLKKHRLLPSDELAEAMSDYVDA 473
Query: 440 LDLA------------PSGKGEILQPELTPNPALEVLNICG 468
+DLA P KG + + P L+V + G
Sbjct: 474 MDLATYGQDNEGCVVPPKAKGRRTRETVKPISGLDVDALLG 514
>gi|46124687|ref|XP_386897.1| hypothetical protein FG06721.1 [Gibberella zeae PH-1]
Length = 693
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 199/463 (42%), Gaps = 82/463 (17%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T++T N+L + GYE++ VLQ++ + ++ L+ P T AGD + AI
Sbjct: 53 VGVLGLRTDDTYNKLQDD-DGYENITVLQEMGPMTMSSLRDLQSAVKPSNTWAGDAVSAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV +DM+ + + K + + LITD DPD G KE+ G + N
Sbjct: 112 VVAIDMM-DTFTKKLKWNRKIFLITD---DFDDPDYGFKEEDKP---------GTKEDNE 158
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
+L+ +D +F+ + A +D + R + + P + G
Sbjct: 159 KALKALA----------DDCKDGVFANIAEA----IDELDTPR----IKGVKPYKTYDGA 200
Query: 223 LELSE------KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFAT 262
L L + M I V Y KT E+ T + D+ + A
Sbjct: 201 LTLGDPETFPAAMSINVERYFKTHLARPLTASTVVVKSEDGEATQQTQDDEMEGIEFLAV 260
Query: 263 HEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
+ + YK V DP + V + KGY YG V IS +E K +KS +
Sbjct: 261 KQAR---SYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEHNITKIDTQKSFSI 316
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
+GF + + + + IA ++++T+A+S+L A+ E+ AI R V + G+
Sbjct: 317 IGFIPCAKYEPFLNIGETCVTIARKFDAKSTIALSSLVWALSELESYAIARIVTKDGKDP 376
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQ 428
++V +L P V + + Y LPFAED+R +QFP + V+ Q P ++
Sbjct: 377 LLV-LLAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVTGQTVSKHRLLPTDE 432
Query: 429 QQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
+A + V +DL+ G + P E P NP + +N
Sbjct: 433 LNDAMSDYVDAMDLSTYGMDDDGNPSEYVPIDETFNPTVHRVN 475
>gi|452824588|gb|EME31590.1| ATP-dependent DNA helicase 2 subunit 2 isoform 1 [Galdieria
sulphuraria]
Length = 691
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 188/415 (45%), Gaps = 19/415 (4%)
Query: 6 EALLLLLDVSPSMHS-VLPDVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEV 63
EA++L+ D+ ++ + L ++++ + L YG ++ G++ G+ E +N L +
Sbjct: 3 EAIVLVCDIGCTLDAQSLDQLKQVSIAFFLRCLTYGSWRQLFGLVFMGSREPDNHLHNLL 62
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
GGY H+K + + D LV+ D++DAI V D+LI + K + +
Sbjct: 63 GGYTHIKTVVVPERPDISLVKYFYQCQLQGGLSDYIDAICVSSDLLISAVNKK-KLQPRI 121
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
LITD K T+ QV I + +R+ I + L + V I N L
Sbjct: 122 VLITDG----KAEQFFTQ--QVEEILPALKERSIRLDVIGIDDFLEDKMSHSVQISNAAL 175
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 243
L + L + + S T + G L++S ++ V +Y + K
Sbjct: 176 LCRLTDSLDGTALSFKVSMEQLSEPIVKPFSLRTNYSGMLQIS-SVQFPVRLYTYCRDFK 234
Query: 244 FPTLKK--YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
PT + +S+ S + VK + + ED + + PE+ I+G+ YG ++P+S
Sbjct: 235 PPTGNRIFWSESMESGKQVLC--VKETHYFSVQED--RELEPEEMIEGHFYGRSLIPVSP 290
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+ A+ + K +K+LGF + +H M V++ I +P + + +L AM EM
Sbjct: 291 FDLPALSYGAPKCLKVLGFFAKKDFSQHILMSGVDVMIPDPNDEISITYFVSLTEAMLEM 350
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF 416
++VA+ R V R+ S + ++ P++ K + + LP ED+R FPS
Sbjct: 351 DRVALCRYV-RRDNTSPALMLMWPHL--KSDGILCLFLCQLPVLEDIRNHTFPSL 402
>gi|442762071|gb|JAA73194.1| Putative dna-binding subunit of a dna-dependent protein kinase ku80
autoantigen, partial [Ixodes ricinus]
Length = 637
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 179/423 (42%), Gaps = 78/423 (18%)
Query: 92 GTCAGDFLDAIVVGVDMLIKK-YGETYKGKKHLCLITDALCPLK---------------- 134
G+ DFLDA++V +D++ K+ G+ ++ KKH+ + TD P
Sbjct: 7 GSQQADFLDALIVCMDVIQKETVGKKFE-KKHIEVFTDLSSPFSKDQLDIITHNLRKSNI 65
Query: 135 ----------DPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VRASLSGEP 172
D + GT + S + +K I V SL GE
Sbjct: 66 SLQFFLPIQADKEDGTGDRGDSNLHSDHCRPSFPLKGITEQQEEGIQMVKQVMMSLEGE- 124
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKI 231
D L I+S S + L + + I+ +I +R L + + I
Sbjct: 125 --------DGLDEIYSFSESLRQLCI-----------FKKIARSSIPWRCQLTIGSNLSI 165
Query: 232 KVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYR 291
++ YK +EK T D +++ + Y +D VP E I+G+R
Sbjct: 166 EILAYKSIVQEKVKTSWTVVD----ARTLRKEDIQKETVYCLNDDDETEVPKEDTIQGFR 221
Query: 292 YGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATV 349
YG ++P S + E +K+K E K +LGF +S + R Y+M + L + A G+ A V
Sbjct: 222 YGSDIIPFSKVDQEQMKYKSEGKCFSVLGFCRSSQVHRKYFMGNQVLKVFAAKGDEAAAV 281
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S+L A+ E++ VAIVR + + + + VGV P++ + + + LPF ED+R
Sbjct: 282 ALSSLIHALDELDMVAIVRYAYDR-RTNPQVGVAFPHIKDTY---ECLVYVQLPFMEDLR 337
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVL 464
++ F S + P E Q A D L+ + L + E +L PNP + L
Sbjct: 338 QYMFSSLKN--NKYTPTEVQLSAVDALIDSMSLMKKEEEEDTIKDLFPTTKIPNPQFQRL 395
Query: 465 NIC 467
C
Sbjct: 396 FQC 398
>gi|358391859|gb|EHK41263.1| hypothetical protein TRIATDRAFT_295201 [Trichoderma atroviride IMI
206040]
Length = 689
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 201/448 (44%), Gaps = 48/448 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDFLDAI 102
VGV+ T+ET + L ++ GY+H+ +LQ + + +++L K P T GD + AI
Sbjct: 53 VGVVGLRTDETSHTLAED--GYDHISILQPLGPMSMSGLKTLQPKIQPSKTTEGDAISAI 110
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDAL-CPLKDPDVGTKEDQVSTIARQMVAFGLRMKN 161
V+ VDM I + + K K+ +CL+TD L PD G KE+ + +Q +K
Sbjct: 111 VIAVDM-IDTFTKKNKWKRQICLVTDVLGVDFDAPDYGYKEEDKPAVKKQNEE---TLKK 166
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
+V + I+E + +N KS D + +L + + V + R
Sbjct: 167 LV--DGCGEDARFASIVEAIDDMNEPRAKSVKPYKTYDGSLTLGDPKNAPAVVEVRVERY 224
Query: 222 -DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS-- 278
L+ + V K+ E+ P+ ++ + A VK YK V DP
Sbjct: 225 FKTHLARPVTASTVVVKE--EQAGPSQAADDEQMEGVELTA---VKQSRTYK-VNDPDAP 278
Query: 279 ---KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
+ V E KGY YG V IS ++ K + +KS K++GF + +
Sbjct: 279 GGKRDVEFESLAKGYEYGRTAVHISESDHNVTKLQTQKSFKIIGFIPKEKYEPLLNLGES 338
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV---LTPNVSEKIN 392
+ IA + ++ +A S+L A+ E++ A+ R V + + ++V + L PN + +
Sbjct: 339 CVTIAAKYDEKSELAFSSLVWALSELDSYAVARLVTKDEKDPIMVLLMPYLEPNYACLYD 398
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLA 443
+P LPFAEDVR +QFP + +S Q P+++ +A + V +D++
Sbjct: 399 VP-------LPFAEDVRSYQFPPLDRVVTISGQTITKHRLLPSDELSQAMSDYVDAMDIS 451
Query: 444 PSGKGEILQP------ELTPNPALEVLN 465
G + +P + NPA+ +N
Sbjct: 452 NYGIDQDGEPAEYATIDEIYNPAIHRIN 479
>gi|157137679|ref|XP_001657128.1| ku P80 DNA helicase [Aedes aegypti]
gi|108880785|gb|EAT45010.1| AAEL003684-PA [Aedes aegypti]
Length = 675
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 207/472 (43%), Gaps = 58/472 (12%)
Query: 1 MARTREALLLLLDVSPSM--------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR +E +++LDV + + S+++Q+K+ EVG++L GT
Sbjct: 1 MARNKEGCMIILDVGKDTLVKSGKHDQTFFERAKNCVSKIVQRKIFSKPQDEVGLVLMGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTCAGDFLDAIVVGVDMLIK 111
+ T N+L E GGY H+ ++ + +++ L K + GD+ DA+VV ++ L
Sbjct: 61 DGTNNQLNVEYGGYHHISEAFELNPSNWQMLRVLEKQVNASKVNGDWFDALVVAMNFL-- 118
Query: 112 KYGETYKGKKHLCLI-TDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
K G K L +I AL + DV +Q+ ++ +++ + V+ S+
Sbjct: 119 KVGAQAKKFASLKIILVSALSVSSNLDV----EQMDSVVKKLTEMPCELN--VINDSVEH 172
Query: 171 EPHMRVIIENDNL----LNIFSKKS-------SAKTLFVDSTTSLRGARKTRDISPVTI- 218
+ DNL L IFS+K + + + D GA D + + +
Sbjct: 173 HADSDEQQDEDNLIFDALGIFSQKQQKTKEQRANEKMLSDIVFKSNGALCNIDSAELLLV 232
Query: 219 -----------FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+ L + +++I + + EEK L + K ST AT ++K
Sbjct: 233 HFEKKATRAAPWNSVLSIGTQIQISISAFLLITEEK--GLGSF--KTESTYPEATVQLKT 288
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNI 326
DY +K+ D S E I GY YG VVP S + +K E+ + LGFT A NI
Sbjct: 289 DY-FKN--DQSFEPDYENVINGYMYGSTVVPYDSQ--IDIDYKSGEQRLSCLGFTVAGNI 343
Query: 327 LRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
L Y ++ +A + + ++AL +AM +++ V IV V+R+ + + VL P
Sbjct: 344 LEEYLCGTGTHVVVARKDCAASEAKLAALVKAMIDLDVVMIVTKVYRRDTRP-KINVLMP 402
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
++ F L F E+V +FP ++P + Q EA D L+
Sbjct: 403 TFKKRY---PCFIMLELCFQEEVALLKFPPL--LSNKYKPTDAQYEAVDKLI 449
>gi|440636757|gb|ELR06676.1| hypothetical protein GMDG_00293 [Geomyces destructans 20631-21]
Length = 724
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 208/470 (44%), Gaps = 65/470 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQD---IKVVD-GHLVQSLKHLPQGTCAGDFLD 100
VG++ F T+ET N L E GY ++ ++Q IKV D L +S+K P + GD +
Sbjct: 53 VGIVGFRTDETNNALEGE-EGYNNISIMQPLGPIKVPDLKKLQKSVK--PSKSDVGDAVS 109
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
AI++ +DM+ +++ + K + + L+T+ + D+ +++ ++V G+
Sbjct: 110 AIIIAIDMM-ERFTKKLKYARKIVLVTNGTGLMDSDDLDETSSKLNEDGIELVVLGVDFD 168
Query: 161 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTI 218
++ E + N+ +L + K K++F + +++ + +D P
Sbjct: 169 DL--EFGFKEEDKDSLKAGNEKVLRSLADKCE-KSIFGTAAEAVQDLSIPRVKDYRPYAT 225
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---------------SDKAPST 257
F+G L L + M I + Y +T K P+ Y D +
Sbjct: 226 FKGQLTLGDPEKYDTAMCIDIERYFRTKVAKPPSASSYVVAEMAGDNEGDVKMEDISAQG 285
Query: 258 DKFATHEVKVDYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
D + VK YK V++ + + V + +G+ YG V I+ ++ K +
Sbjct: 286 DALTS--VKNARTYKIVDESAPGGKRDVDRDDLAQGFEYGRTAVAIAESDQNITKLETVA 343
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
S ++GF A R++ M + + +A N +A +A+S+L ++ E+ A+ R V +
Sbjct: 344 SFSIVGFIPAERYERYFNMGESCVTVAARSNEKARLALSSLVHSLAELESYAVARIVLKD 403
Query: 374 GQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
G+ +V + + P++ I++P LPFAEDVR ++FP + +S Q
Sbjct: 404 GKDPQLVLLSPSIEPDLESLIDVP-------LPFAEDVRLYRFPPLDRVITLSGQTMTKH 456
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALEVLN 465
P + A V +D++ GK + P E T +P L +N
Sbjct: 457 RNLPTDDLTRAMSAYVDAMDISTFGKDDEGNPVEYMAIEDTYSPVLHRIN 506
>gi|351712841|gb|EHB15760.1| ATP-dependent DNA helicase 2 subunit 2 [Heterocephalus glaber]
Length = 748
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 227/507 (44%), Gaps = 66/507 (13%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR+ + A++L +DVS +M + P E K+ + +Q+++ E+ ++LFGT
Sbjct: 1 MARSGKAAVVLCMDVSFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFGT 60
Query: 53 EETENELTKEVGG-YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
+ T+N L VG Y+++ V + +K+ D L++ + Q G+ D + + L
Sbjct: 61 DSTDNALA--VGDQYQNITVHRHLKLPDFDLLEDIDSRIQLGSQQADCI------LFWLG 112
Query: 111 KKYGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQM-VAFGLRMKNIVVRAS 167
KK+ K+H+ + TD P KD D+ + ++I+ Q + F + K+
Sbjct: 113 KKFE-----KRHIEVFTDLSSPFSKDQLDIIIHNVKKNSISLQFFLPFPIGKKD---GTG 164
Query: 168 LSGEPHMRVIIENDNLLN--IFSKKSSAKTLFVDSTTSLRGARKTRDI-------SPVTI 218
G+ ++ + + L + ++ + SL G +I + I
Sbjct: 165 DRGDGNLHLSDHGPSFLQKGVTEQQKEGIQIVKKMMLSLEGVNGLDEIYSFSESLRQLCI 224
Query: 219 FRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
F+ L + + IK+ YK +EK D +++ +
Sbjct: 225 FKKIERHSMPWPCQLTIGSNLSIKIVAYKSILQEKVKKTWIVVD----ARTLKKEDIQKE 280
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 327
Y +D V E I+G+RYG ++P S + E +K+K E K +LGF +S +
Sbjct: 281 TVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVQ 340
Query: 328 RHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
R +YM + + +F A + ATVA+S+L A+ E++ VAIVR + + + + VGV P
Sbjct: 341 RKFYMGNQVLKVFPAH-DDEAATVALSSLIHALDELDMVAIVRYAYDR-RANPQVGVAFP 398
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 445
+ + + + LPF ED+R++ F S K + P E Q A D ++ + L
Sbjct: 399 FIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLNAVDAFIESMSLIKK 454
Query: 446 GKGEILQPEL-----TPNPALEVLNIC 467
+ E +L PNP + L C
Sbjct: 455 DEEEDTIKDLFPTTKIPNPEFQRLFQC 481
>gi|242785406|ref|XP_002480587.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218720734|gb|EED20153.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 719
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 200/454 (44%), Gaps = 53/454 (11%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DVS SM H+ D+ L R + K+ K VGV+ T+ T
Sbjct: 4 KEATVYIVDVSKSMKQHNHGRDISDLDWAMRYVWDKITTTVGTGRKTAAVGVVGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+QD+ V L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLDDD-EGYENITVMQDLGQV---LMPDIRRLREEIKPSHTDEGDAISSLIVAIHM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
Y + K K+ + L+TD + +G ++ + +++ G+ +
Sbjct: 119 NVYTKKLKYKRKIYLVTDGKGAMSSDGLGDIASKLKSDNIELIVLGVDFDD--PDYGFKE 176
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E EN+ LL + + + + + + FRGDL L +
Sbjct: 177 EDKDLRKAENEALLRGLVEDCEGVYGTLAQAIQELDTPRVKVVRGIPSFRGDLRLGDPTR 236
Query: 228 ---KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVDYEYK--------- 272
++I+V Y +T K P+ + D + + T E D +
Sbjct: 237 YDTALRIQVERYYRTYVAKPPSASSFVPGGDPSQPSASIQTLEAGKDLDANLTNVRFVRT 296
Query: 273 -SVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
V+DP+ + + E+ KGY YG V IS ++ K + +++L+GF A +
Sbjct: 297 YHVDDPTVAGGKRELEREELAKGYEYGRTAVHISESDENITKLETTAALELIGFIQADHY 356
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R M + N+ IA+ N +A +A+S+L A+ E++ AI R V + G+ ++V +L P+
Sbjct: 357 DRFMNMSNSNVIIAQKTNEKAALALSSLIHALFELDCYAIGRLVVKDGKNPLIV-LLAPS 415
Query: 387 VSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ PD LPF EDVR ++FP K
Sbjct: 416 IE-----PDYECLLEVQLPFYEDVRSYKFPPLDK 444
>gi|242785409|ref|XP_002480588.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218720735|gb|EED20154.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 715
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 200/454 (44%), Gaps = 53/454 (11%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DVS SM H+ D+ L R + K+ K VGV+ T+ T
Sbjct: 4 KEATVYIVDVSKSMKQHNHGRDISDLDWAMRYVWDKITTTVGTGRKTAAVGVVGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+QD+ V L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLDDD-EGYENITVMQDLGQV---LMPDIRRLREEIKPSHTDEGDAISSLIVAIHM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
Y + K K+ + L+TD + +G ++ + +++ G+ +
Sbjct: 119 NVYTKKLKYKRKIYLVTDGKGAMSSDGLGDIASKLKSDNIELIVLGVDFDD--PDYGFKE 176
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E EN+ LL + + + + + + FRGDL L +
Sbjct: 177 EDKDLRKAENEALLRGLVEDCEGVYGTLAQAIQELDTPRVKVVRGIPSFRGDLRLGDPTR 236
Query: 228 ---KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVDYEYK--------- 272
++I+V Y +T K P+ + D + + T E D +
Sbjct: 237 YDTALRIQVERYYRTYVAKPPSASSFVPGGDPSQPSASIQTLEAGKDLDANLTNVRFVRT 296
Query: 273 -SVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
V+DP+ + + E+ KGY YG V IS ++ K + +++L+GF A +
Sbjct: 297 YHVDDPTVAGGKRELEREELAKGYEYGRTAVHISESDENITKLETTAALELIGFIQADHY 356
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R M + N+ IA+ N +A +A+S+L A+ E++ AI R V + G+ ++V +L P+
Sbjct: 357 DRFMNMSNSNVIIAQKTNEKAALALSSLIHALFELDCYAIGRLVVKDGKNPLIV-LLAPS 415
Query: 387 VSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ PD LPF EDVR ++FP K
Sbjct: 416 IE-----PDYECLLEVQLPFYEDVRSYKFPPLDK 444
>gi|390464792|ref|XP_002749807.2| PREDICTED: X-ray repair cross-complementing protein 5 [Callithrix
jacchus]
Length = 779
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 226/521 (43%), Gaps = 90/521 (17%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 53 NKAAVVLCMDVGFTMSNSFPGEESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 112
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI-----VVGVDM 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA+ V+ +
Sbjct: 113 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 169
Query: 109 LIKKYGETYK----------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
+ KK+ + + K L +I +L C + K+ G + D
Sbjct: 170 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLDKEGGSGDRGDGP 229
Query: 146 STIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
+ +F GL + +V+ SL GE D L I+S S +
Sbjct: 230 FLLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYSFSESLR 279
Query: 195 TLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
L V + I +I + L + + I++ YK +E+ D
Sbjct: 280 KLCV-----------FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD- 327
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
+++ + Y +D + E I+G+RYG +VP S + E +K+K E
Sbjct: 328 ---AKTLKKEDIQKETVYCLNDDDETEILKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEG 384
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR +
Sbjct: 385 KCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALNDLDMVAIVRYAY 444
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P++ + + LPF ED+R++ F S K + P E Q
Sbjct: 445 DK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLN 499
Query: 432 AADNLVKMLDLAPSGKG-----EILQPELTPNPALEVLNIC 467
A D L+ + LA + ++ PNP + L C
Sbjct: 500 AVDALIDSMSLAKKDEKTNTLEDMFPTTKIPNPRFQRLFQC 540
>gi|406860029|gb|EKD13090.1| putative ATP-dependent DNA helicase II subunit 2 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 774
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 66/429 (15%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDF 98
K VGV+ F T+ETEN L+ + GY+++ VL+ + +D + L K + GT AGD
Sbjct: 48 KTLSVGVVGFRTDETENPLSND-DGYDNITVLKQLGEMDMPSYEELRPKLVSSGTDAGDA 106
Query: 99 LDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 154
+ AIVV ++ + K G K + + L+TD ++D ++ Q+ + ++V
Sbjct: 107 ISAIVVAAQLIDEGTRLKSGGQAKFVRKIVLVTDGQGRIEDDNIEPIAQQLDELNIRLVV 166
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL-----FVDSTTSLRGARK 209
G+ + E V +N+ LL ++ VDS T
Sbjct: 167 LGVDFDD--AEYGFKEEDKSSVKRDNEKLLRKLTESCRDGDFGTMAEAVDSLT----IPA 220
Query: 210 TRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKY-----------S 251
+ + P + G L L + +K I V Y KT P+ +
Sbjct: 221 IKVVRPFKAYGGRLGLGDYVKYPESALFIDVERYSKTKRATAPSASNFVVSRAAAINGDG 280
Query: 252 DKAPSTDKFATHEVKVDYEY--KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
D + A + + DY +S +V + KGY YG VP +F
Sbjct: 281 DTEMTDAPLAAVKNRRDYHVFDESASQGKAIVDRTELAKGYYYGSTAVPFGEDAEAETRF 340
Query: 310 KPEKSVKLLGF-----------TDASNILRHYYMKDVNL-----FIAEPGNSRATVAVSA 353
K ++S ++GF + A+ ++ Y + +N+ IAEP N +A +A+S+
Sbjct: 341 KSKESFSIIGFIPNDKVFRRDKSHATQLMPSQYERFLNMGEACVTIAEPTNDKARMAMSS 400
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP----NVSEKINIPDSFYFNVLPFAEDVR 409
L A+ E A+ R V + G V++ ++ P ++ +++P LPFAEDVR
Sbjct: 401 LVHALDETESYAVARLVKKDGAGPVIL-LMAPLIDLDIECLVDVP-------LPFAEDVR 452
Query: 410 EFQFPSFSK 418
++FP K
Sbjct: 453 NYKFPPLDK 461
>gi|384248239|gb|EIE21724.1| hypothetical protein COCSUDRAFT_83513 [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
YS+K+ + D A+H+V + EYK DP VP E+R K Y+YG Q VP+ + + + +
Sbjct: 2 YSEKSRAAD--ASHDVLREQEYKDASDPDATVPAEERAKAYKYGKQYVPVQAEDEAYLAY 59
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
+P++ + L+GF DA ++ + Y+MKD + +AE GN R+ +A+SAL RAM N+
Sbjct: 60 RPDRGISLMGFLDAESVPQQYHMKDPWVMVAEKGNERSGLAMSALVRAMANKNQ 113
>gi|449304532|gb|EMD00539.1| hypothetical protein BAUCODRAFT_172807 [Baudoinia compniacensis
UAMH 10762]
Length = 729
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 48/453 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDF 98
K GV+ T+ T N L E Y ++ V QDI V V+ L+ + T AGD
Sbjct: 49 KTAMAGVVGLRTDGTSNFLESE-SEYANITVFQDIGQVFMAQVRRLRGELVVSSTDAGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+++ + M++ + K ++ + LITDA ++ D+ +++ A Q+V G+
Sbjct: 108 MSALIIAIQMIVNTC-KKLKYERKIVLITDARGSMQADDLEAVVEKLKEDATQLVVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ +P + EN+ +L + + + + + P
Sbjct: 167 FDDPEYGFKEEDKPTSKA--ENEAILKQLCQDCGGTFGTLAQAVDELSVPRVKSVRPTPS 224
Query: 219 FRGDL------ELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVK--- 266
++G L E + I V Y KT + ++ SD APS AT +
Sbjct: 225 YKGSLTLGNPQEFDTALSIDVERYPKTMTAPAQSASRFVVRSDLAPSEVMQATQTLDGEA 284
Query: 267 ---------------VDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
+ Y+ P + + ++ KGY YG V IS ++ +
Sbjct: 285 APNGYSEGLSAVKNALSYQVDDENAPGGKRDIDRDELAKGYEYGRTAVHISESDRNVTTY 344
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ S ++GF D S R M L IA+ GN +A +A+S+ A+ E+ A+ R
Sbjct: 345 ETVPSFDIIGFVDKSQYERWMDMTRAALTIAQRGNDKAIMALSSFIHALYELESYAVARL 404
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 424
V ++ + +V ++ P + + + Y LPF ED+R ++FP + VS +
Sbjct: 405 VKKENNEPRIV-LVAPCIEPDL---ECLYDVELPFTEDLRSYKFPPLDRIITVSGKELKV 460
Query: 425 ----PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
PNE Q A + V +DLA G + +P
Sbjct: 461 HRNLPNEDLQAAMSDYVDSMDLATFGTNDEGEP 493
>gi|345566887|gb|EGX49827.1| hypothetical protein AOL_s00076g711 [Arthrobotrys oligospora ATCC
24927]
Length = 698
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 184/430 (42%), Gaps = 40/430 (9%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K + V+ F T+ ++N L + Y ++ +L + ++ L L P T GD
Sbjct: 49 KTDTIAVVGFRTDGSDNSLFQNDENYSNISILSPMSQFLMPQIRELNKLLEPSATDRGDG 108
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+VV +DM I+KY + K +++ +T+ + +Q++ + G+
Sbjct: 109 VSALVVALDM-IEKYCKKLKYIRNIVFLTNGTGNFDFDGINDIIEQITEQKINLTILGVD 167
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
++ + + + EN+ L + + +T+ PV
Sbjct: 168 FDDLEFGVAEKDKSLDKA--ENERALRELCDQCDGMYGTIAEAIEEIQRPRTKKTRPVHS 225
Query: 219 FRGDLELSEK-------MKIKVWVYKKTGEEKFPTLKKYSDKAPST-DKFATHEVKV--- 267
FRG L + + + I V + +T K PT ++ PS D + K+
Sbjct: 226 FRGQLSIGNESTNPRSTLLIDVERFPRTMVAKPPTASSFA--VPSERDSVGGNLHKIRNT 283
Query: 268 -DYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
++ + P K + EQ KGY YG +VPIS + E VKF E S+K++GF S
Sbjct: 284 RTFQVGDEDAPGKAIDIEQEDMAKGYLYGRTIVPISVEDQEIVKFDTEASLKIVGFIPKS 343
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG--- 381
R + + N+ +A N A +A+S+ A+ E++ + I R V + + V++
Sbjct: 344 GFERPICLSNSNIIVASKANDEAIMALSSFIHALYELDSLVIGRLVTKDDKPPVMIAMAP 403
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEA 432
++ P+ + + LPFAED R+++F + + P ++ QEA
Sbjct: 404 IIEPSFECLVEVQ-------LPFAEDARQYKFAPLNTVRTTAGKVLDKHRLIPTQELQEA 456
Query: 433 ADNLVKMLDL 442
D+ V +DL
Sbjct: 457 MDDYVDSMDL 466
>gi|358378936|gb|EHK16617.1| hypothetical protein TRIVIDRAFT_232258 [Trichoderma virens Gv29-8]
Length = 714
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 198/468 (42%), Gaps = 63/468 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
VGV+ F T+ET + L ++ GYE++ +LQ + + + SLK+L P T GD +
Sbjct: 53 VGVVGFRTDETNHTLGED--GYENISILQPLGPM---TMTSLKNLQSKVKPSRTVEGDAI 107
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
AIVV VDM I Y + K K+ +CL+TD + D+ ++ ++ G+
Sbjct: 108 SAIVVAVDM-IDTYTKKNKWKRQICLVTDGHGEIDPDDIDDISRKICDSNIELTVLGVDF 166
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR--DISPVT 217
E V +N+ L + F ++ + R + P
Sbjct: 167 D--APDYGFKEEDKSLVKKQNEQTLKRLVDGCGQDSRFASIVEAIDDMNEPRAKSVKPYK 224
Query: 218 IFRGDLELSEK------MKIKVWVYKKTGEEKFPTLK----KYSDKAPS-------TDKF 260
+ G L L + + I+V Y KT + PT K PS D
Sbjct: 225 TYDGLLTLGDPKNAPAVVDIRVERYFKTHLARPPTASTVVVKEEQAGPSEAADEEQMDGV 284
Query: 261 ATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
VK YK V DP + V E KGY YG V IS ++ K + +KS
Sbjct: 285 ELTAVKQARTYK-VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESDHNVTKLETQKSF 343
Query: 316 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
K++GF + + + IA + ++ +A S+L A+ E++ A+ R V + +
Sbjct: 344 KIIGFVQKEKYELLLNLGETCVTIAAKYDEKSELAFSSLVWALSELDSYAVARLVTKDEK 403
Query: 376 QSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------- 424
+ ++V + + PN ++P LPFAED+R +QFP + VS Q
Sbjct: 404 EPIMVLLMPHMEPNYVCLYDVP-------LPFAEDIRTYQFPPLDRVVTVSGQTLTSHRL 456
Query: 425 -PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALEVLN 465
P+++ +A + V +D++ G E +P E NPA+ N
Sbjct: 457 LPSDELNQAMSDYVDAMDISTYGIDEEGEPAEYATIEEIYNPAIHRTN 504
>gi|328776977|ref|XP_625128.3| PREDICTED: x-ray repair cross-complementing protein 5-like [Apis
mellifera]
Length = 712
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 219/477 (45%), Gaps = 62/477 (12%)
Query: 3 RTREALLLLLDV---SPSMH---SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ E+L+LLL++ +P++ S+ + + R I+K + E+ ++L G+ T+
Sbjct: 2 NSAESLVLLLNIGVTNPNIENNSSLFEKAKYIAQRKIEKMIFLKPKDEIAIMLMGSSITK 61
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N L + +++ D +V + V+ +L ++++A+ V+ + K
Sbjct: 62 NNLNSK-----YIEEFTDFQVPNWDFVRKCMNLKSTKYCYNWVEALYAAVEFI--KQNVI 114
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRV 176
+ + L++D + + +S +++A + +N++ L+ +
Sbjct: 115 DNSIRKIILMSD---------FNEETNIISKFEAKLIA---KAENLLHDKPLTSLNSSKK 162
Query: 177 IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY 236
++++ + + + +F D+ + L+ +T + P+ + DL+L +K KI V Y
Sbjct: 163 LLKD-----VHDQINGQHIIFDDAISCLKFYEQTS-VKPLPSYY-DLQLFDK-KIPVVSY 214
Query: 237 KKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQV 296
K EKFPT KK A K + K++Y ++ ++ IKGY+YG
Sbjct: 215 VKIDIEKFPTWKK----AKGNQKLQS---KIEY----LDGQRNSYAKDEIIKGYKYGGTF 263
Query: 297 VPISSAEWEAVKFKPE-KSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSAL 354
+P+ + + +K E KS K+ GFTD +NI L H+Y ++ + S T +L
Sbjct: 264 IPVEKELEDKLSYKSEMKSYKIYGFTDKNNIDLEHFYKSATHVILPSSEESNVTKPFYSL 323
Query: 355 ARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREF 411
+AM E N VAIVR V+R +V + I+IP+ + V L FAED R
Sbjct: 324 VQAMHETNSVAIVRKVFRNNSTPRMVALFPC-----IDIPNEPWCLVEIELAFAEDQRLM 378
Query: 412 QFPSFSKFPVSWQPNEQQQEAADNLVKML---DLAPSGK---GEILQPELTPNPALE 462
+ S + Q + +Q +A DNL+ L D+ S + + P PNPA++
Sbjct: 379 E--SRPMKSIIKQLSNEQNKAVDNLINSLMLNDIQDSCEIDGNQYFLPGCVPNPAIQ 433
>gi|357626202|gb|EHJ76373.1| ku P80 DNA helicase [Danaus plexippus]
Length = 706
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 222/466 (47%), Gaps = 51/466 (10%)
Query: 1 MARTR--EALLLLLDVSPSMHSVLPD---------VEKLCSRLIQKKLIYGKNHEVGVIL 49
MA T+ + +++LDV ++ S+L D + R+I++K++ + +G+IL
Sbjct: 1 MAPTKVDQGTIIILDVGKNV-SILEDKNQKSFFESARECAVRIIERKILSQGKNLLGIIL 59
Query: 50 FGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDM 108
G++ ++N L+++ G ++++L +++ +++ L P + G++LDA++V VD
Sbjct: 60 LGSKISKNNLSEQTPGCCRNIELLAELQYPTWKMIRDLPTQPTKS-TGNWLDALIVAVDH 118
Query: 109 LIKKYGETYK-GKKHLCLITD--ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
K + ++K K++ L+T+ AL L++ D+ T + Q F L V+
Sbjct: 119 F-KSHTSSFKIADKNIILLTNFEALSDLEESDIET-----AISGFQEDGFELD----VIG 168
Query: 166 ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS--LRGARKTRDISPVTIFRGDL 223
L E + I+ L F + ++ T D L +KT + +P + DL
Sbjct: 169 PELYNEDNKNSDID---LARQFVEGTNGSTATFDYAMRYLLFHKKKTVNSNPWNV---DL 222
Query: 224 ELSEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKF-ATHEVKVDYEYKSVEDPSKV 280
+ +KI V Y + +E P +K + S + P T+K AT ++ + + E +V
Sbjct: 223 SIGPNIKIPVSAYIRIKDE--PVVKNFNKSVRNPVTEKSSATEYIERKKTFINTEAQMEV 280
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI- 339
E IKGY+YG QV+P S + + KS+ + GFT + NI D ++
Sbjct: 281 ESTEV-IKGYQYGEQVIPFSDFDKSMIYDAGNKSLNVYGFTKSGNITWQNLNGDGLYYVF 339
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 399
+ G+ ++ AV L + E++ VAIVR V+ G + VL P + + +
Sbjct: 340 GQKGDKKSEYAVRCLVECLLELDLVAIVRRVYNNGNAPRMF-VLMPVIDSENFV--GLSM 396
Query: 400 NVLPFAEDVREFQFPS--FSKFPVSWQPNEQQQEAADNLVKMLDLA 443
L + E+++ FP+ K+ S EQQ EA L+K +DL
Sbjct: 397 AGLCYKEEIKSMAFPATNLKKYNCS----EQQVEAFKELIKAMDLT 438
>gi|156051442|ref|XP_001591682.1| hypothetical protein SS1G_07128 [Sclerotinia sclerotiorum 1980]
gi|154704906|gb|EDO04645.1| hypothetical protein SS1G_07128 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 705
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 213/471 (45%), Gaps = 63/471 (13%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET N+L + GYE++ VL+ + ++ ++ + P GT AGD
Sbjct: 49 KTDGVGIVGFRTDETNNDLQRSGEQGYENISVLKPLGQFQMTDLEEMQEVIKPNGTEAGD 108
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ A+VV V+M+ + K G+ K + + L+TD + ++ ++S ++V
Sbjct: 109 AVSAVVVAVEMIKEHTTLKSGKPGKFARKIVLVTDGKGFMHGEELDDIAKEISRNDIKLV 168
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 208
G+ + E V EN+ LL F++ S +F ++ +
Sbjct: 169 VIGVDFDD--AEFGFKEEDKDLVKAENEKLLRSFTE-SCLDGIFGTIAEAIEALATPVVK 225
Query: 209 KTRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKY----SDKAPST 257
TR+ + T G L L + K I V Y KT + K + + Y ++ P
Sbjct: 226 VTREYNTYT---GPLTLGDPTKYPETAVSIDVARYFKTHQAKPVSARSYVEAGDEELPDA 282
Query: 258 DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
D + VK YK V DP+ + V + KGY YG +V IS A+ K +
Sbjct: 283 DDLTS--VKQTRTYK-VNDPTAPGGKRDVERDDLEKGYEYGSTIVHISQADEGVTKLQAI 339
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
K ++GF +N R+ M + + I + N +A +A+S+ A+ E+N A+ R V +
Sbjct: 340 KDFSIIGFV-PNNYERYLNMGESCITIPQKTNEKARMALSSFVHALNELNSCAVARIVKK 398
Query: 373 QGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 424
G ++V + + P++ +++P LPFAEDVR ++F K F S
Sbjct: 399 DGADPLIVILAPFIEPDLEGLVDVP-------LPFAEDVRSYRFAPLDKVFNSSGGLMEK 451
Query: 425 ----PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALEVLN 465
P++ + A + V +DL+ +GK E P E T +P L +N
Sbjct: 452 HKNLPSKDLKAAMSSFVDSMDLSTAGKDEAGDPVEYMAIEDTYSPVLHRIN 502
>gi|402086941|gb|EJT81839.1| hypothetical protein GGTG_01813 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 727
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 209/506 (41%), Gaps = 71/506 (14%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFG 51
+E + ++D+ SM V PD++ KLC+ + + K +VGV+
Sbjct: 4 KEVTVFIIDLGQSMGDCNGGRVEPDLDWSMRYVWDKLCTIVAASR----KTWQVGVVGLR 59
Query: 52 TEETENELTK-EVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVG 105
T++T N K GYE++ VLQ + + + SLK L P T +GD + AIVV
Sbjct: 60 TDDTNNIHHKGHEDGYENISVLQPVGPMS---MTSLKELRGQIAPSNTNSGDAISAIVVA 116
Query: 106 VDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+D++ + K K+ + L+TD P+ + + +++ + ++ G+ +
Sbjct: 117 IDLIDNAAPQRLKYKRKIVLVTDGQGPMDEDSLEDIWARINQLNIELTVVGVDFDD--AD 174
Query: 166 ASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
E RV N+ LL + K + ++ L+ R + P F G L
Sbjct: 175 YGSKEEDKTRVKTTNEKLLRTLTGNCKDAVFGTMAEAVEELQNPR-IKTTRPYKTFDGQL 233
Query: 224 EL-------SEKMKIKVWVYKKT-----------------GEEKFPTLKKYSDKAPSTDK 259
L S + I+V Y KT + T++ D + D
Sbjct: 234 TLGDPKAYGSSALSIRVERYFKTKAAHAVSASTVVVKSEDATQSTRTVRGEEDDSVPADG 293
Query: 260 FATH-EVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
T + +Y+ K P + V E KGY YG V IS +E K + K
Sbjct: 294 MLTGLQTARNYQIKDESAPGGKRDVKFEGLAKGYEYGRTAVHISESEHNITKLETTKEFT 353
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
++GF M + + +A + + VA+SAL A+ + A+ R V + G+
Sbjct: 354 IIGFIPKEKFEPFLSMGEACVTLAAKFSEKDEVALSALINALYDTESYAVARLVTKDGKD 413
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 427
+V +L P + + Y LPFAED+R +QFP K +S Q P++
Sbjct: 414 PQLV-LLMPESDVEF---ECLYDVPLPFAEDLRHYQFPPLDKVVTLSGQTMTTHRLLPSD 469
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQP 453
++A + V +DL+ G+ +P
Sbjct: 470 ALEQAMSDYVDAMDLSSYNTGDDDEP 495
>gi|384497794|gb|EIE88285.1| hypothetical protein RO3G_12996 [Rhizopus delemar RA 99-880]
Length = 660
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 192/441 (43%), Gaps = 37/441 (8%)
Query: 45 VGVILFGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQG---TCAGDFLD 100
VIL GT ET+N +E G Y+H+ ++ L++ + + T D LD
Sbjct: 4 ASVILAGTHETDNPCAEESPGQYQHISTSCPLQQPSLDLLRKIAKIQPSQDPTTTPDVLD 63
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
A+++ + M++ + + K +K + + TDA + D E S + + +
Sbjct: 64 AVIIAIQMIVT-HCKKLKYEKCVAVFTDAKHKI---DWLDYEAISSALQENSITLLINGV 119
Query: 161 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFR 220
+ R S P +++ + + S+ VD + +++ P +R
Sbjct: 120 DYHQRNDPSSPPEVQMNYKY--WKELASQTPEGHVWEVDEMYDEIHRLRVKEVRPTPSYR 177
Query: 221 GDLELSEK-----MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 275
G L L + I + +Y + E K PT KYS + T+E + Y +
Sbjct: 178 GFLYLGNPTHENYLAISINMYLRVKEVKLPTADKYSKLSTGPSHAVTYETR--YTVNNTT 235
Query: 276 DP-----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY 330
DP KVV E KG+R+G Q V +S+ E E K K +K + +LGF SN R Y
Sbjct: 236 DPMNNEIEKVVSKEDLEKGFRFGKQRVKVSAEEEEYGKLKTKKEMTILGFIPKSNFPR-Y 294
Query: 331 YMKDVNLFIAEPGNSRAT---VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
Y+K + ++ G R T +A+SA+A A+ E + +A V+ V + + +G+L P
Sbjct: 295 YLKS-HPYVVAAGVHRPTESGMAISAIAYALHETDTLAFVKYV-SKDDGAPKIGLLFPCF 352
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
E I + + +PFA DV + F S P + +++ + D L+ +DL
Sbjct: 353 DENITL---LQYVEVPFAGDVNTYIFRS---IPSVIKRDDEADKMMDELIDEMDLNKLTD 406
Query: 448 GE---ILQPELTPNPALEVLN 465
E L P T NP +N
Sbjct: 407 EEGNKYLDPNDTFNPVFWRIN 427
>gi|380485672|emb|CCF39209.1| Ku70/Ku80 N-terminal alpha/beta domain-containing protein
[Colletotrichum higginsianum]
Length = 730
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 199/483 (41%), Gaps = 70/483 (14%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K VG I T+ET N + + GYE++ VL+++ + + SL+ L P T
Sbjct: 49 KTWTVGFIGLKTDETRNAMMDD-EGYENISVLRELGPM---TLTSLRELRAEVKPSETET 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + A+V+ VDM I+K+ T K K+ + L+TD L P+ D+ + +++ ++
Sbjct: 105 GDAVSAVVLAVDM-IEKFTRTLKYKRRIYLVTDGLAPIDGDDIDSIAKKINQDGIELTVL 163
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS-------AKTLFVDSTTSLRGAR 208
G+ + +P ++ +N+ +L K A+ + T L+ R
Sbjct: 164 GVDFDDAEYGFKEEDKPSIKK--KNEGILQELVSKCDKGQFATIAEAIDELDTPRLKPTR 221
Query: 209 --KTRDISPVTIFRGDLELSEKMK-----IKVWVYKKTGEEKFPTLKKYSDKAP------ 255
KT D P+T+ D K+ I V Y +T + K PT A
Sbjct: 222 PYKTYD-GPLTLGLADPPADLKIPPTPVVINVERYFRTKQAKPPTASTVVVSAEGQGAAS 280
Query: 256 ---------------STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVP 298
S FA Y + P + V + KGY YG V
Sbjct: 281 QSTQALEGEPMEGVESVSGFAAVRSARTYRVNDPDAPGGKRDVEFDSLAKGYEYGRTAVA 340
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
IS +EW K + ++ ++GF M + + ++ + ++ +A+S+L A+
Sbjct: 341 ISESEWNVTKLETVRTFSIIGFIPCEKYEPFLNMGETCMTVSRKFDEKSQLALSSLIHAL 400
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
E+ A+ R V + + V+V +L P + + + Y LPFAEDVR +QFP +
Sbjct: 401 YELESYAVARLVVKDKKDPVLV-LLAPRIEPDM---ECLYDVPLPFAEDVRGYQFPPLDR 456
Query: 419 -FPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALE 462
VS Q P + A + V +DL G E P + T NP +
Sbjct: 457 VVTVSGQEITENHRLLPGDDLTAAMSDYVDSMDLGTFGADEDGNPSEYAAIDDTYNPMIH 516
Query: 463 VLN 465
+N
Sbjct: 517 RIN 519
>gi|407924294|gb|EKG17347.1| Ku70/Ku80 arm [Macrophomina phaseolina MS6]
Length = 725
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 200/454 (44%), Gaps = 60/454 (13%)
Query: 47 VILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDA 101
V+ +++TEN L E GYE++ VLQ + + +Q L+ L P T GD + A
Sbjct: 55 VVALRSDKTENPLASE-EGYENISVLQQLSPI---YMQQLRELREKIRPSNTDEGDAISA 110
Query: 102 IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN 161
+VV + +++ + + K ++ + L+++A + + ++ +++ G +
Sbjct: 111 LVVAIQLIVD-HCKKLKYRRRIILVSNARGSIDAEGLSEIIKKIKGENIELIVLGPDFDD 169
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
+ E N++LL ++ + + + PV +RG
Sbjct: 170 L--DYGFKEEEKDETKATNEDLLKQLAEGCDGVFGTMAQAIEELEIPRVKLTKPVHSYRG 227
Query: 222 DLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFAT-------HE- 264
L L + M I V Y +T +++ PT Y SD AP + + HE
Sbjct: 228 LLTLGDPEKYDTAMTIDVERYPRTMQQRPPTASSYVVRSDLAPGESQAQSSVTMAEGHEG 287
Query: 265 ----------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
VK + Y VEDP + + E KGY YG VPIS +E F
Sbjct: 288 GMPDQSDLAAVKQNISY-YVEDPDAPGGKRDIDREDTAKGYPYGSTAVPISESERNVTDF 346
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ S+ ++GF A + R+ M ++ I + N +A++A+S+ A+ E+ A+ R
Sbjct: 347 ESFASLDIIGFVPADKLDRYMEMSKASIIIPQKANEKASMALSSFIHALYELETYAVARF 406
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSKF-PVSWQ--- 424
V ++ ++ +++ +L P +IN +V LPFAED+R ++FP + VS +
Sbjct: 407 VPKENKEPLIL-LLAP----EINPEYECLIDVELPFAEDMRGYRFPPLDRIVTVSGKEIH 461
Query: 425 -----PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P+E ++ + + +DL+ + + E P
Sbjct: 462 THKNLPSEDLMKSMSDYIDSMDLSTAAQDEDGDP 495
>gi|159032989|gb|ABW87766.1| ATP-dependent DNA helicase II [Cryphonectria parasitica]
Length = 729
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 195/448 (43%), Gaps = 55/448 (12%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HL-PQGTCAGDFLDAI 102
VGV+ T+ TEN+ + GYE++ V +++ V +Q LK H+ P T GD + A+
Sbjct: 53 VGVVGLRTDVTENQYV-DNEGYENICVFKELGPVSLQDMQQLKTHIKPSQTVNGDAMSAV 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV +M++ + + K + + L+TD + + D + ++++ I G+ +
Sbjct: 112 VVASEMIVA-FTKQNKWDRKVYLVTDGMGAIDDDGIDDIANRLNDIGIAFTIIGVDFDD- 169
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFR 220
E + N+ L F K + +F ++ G K R V +
Sbjct: 170 -PEYGFKEEDKSSLKASNERTLKAFVDKCD-RGVFATMAEAIEGLAIPKPRFTKLVRSYD 227
Query: 221 GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--------DKFAT----HE---- 264
G L L + + KT +++P KK S ++ +T D +T HE
Sbjct: 228 GPLTLGDPENFPSAI--KTYVDRWPVTKKSSAESATTVVLKSGSLDTQSTMTLDHEMEGF 285
Query: 265 ---------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
VK YK V DP + V E KGY YG + ++ AEW+ K
Sbjct: 286 ENGGPSLSSVKQHRTYK-VNDPGAPGGKRDVEFETLAKGYTYGSTAIHVAEAEWDITKLD 344
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K ++GF + M + ++ +A+P + + VA+SAL A+ E+ A+ R V
Sbjct: 345 TTKGFSIIGFIANEKVEPFVAMAETSVTVAKPFDETSQVALSALIHALHELEHCAVARLV 404
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV--------- 421
+ G+ V++ +L P V I + Y LPFAED R+++FP K
Sbjct: 405 VKDGKDPVIL-LLKPCVDVDI---ECLYDVPLPFAEDTRQYRFPPLDKVITITGKTLTEH 460
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGE 449
+ P++ + A + V +D++ G+ +
Sbjct: 461 RFLPDKNLKRAMSDFVDAMDISEFGRDD 488
>gi|320588005|gb|EFX00480.1| ku family DNA-binding protein [Grosmannia clavigera kw1407]
Length = 734
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 196/455 (43%), Gaps = 53/455 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDF 98
K VGV+ T+ET N L E GYE++ VLQ+++ + +++L + P T GD
Sbjct: 49 KTWTVGVLGLRTDETRNPLQGE-DGYENIAVLQEVEPMSLTSLRALGSRIQPSSTKTGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AI+V DM+ K + K + + L+TD L P+ D Q++ + Q++ G+
Sbjct: 108 VSAIIVATDMISKAAPKRLKFNRKIVLVTDGLGPIDGDDFDDLAFQLNELDIQLIVVGVD 167
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK--TRDISPV 216
+ +P ++ I N+NLL +K S +++F +++ + + P
Sbjct: 168 FDDAEFGFKEENKPPLK--IYNENLLQSLVEKCS-RSVFGTMAEAIKEMDRPNVKPYRPY 224
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD-------KFATHEVKVD- 268
+ G L L + + + E+F L K + P+T AT +D
Sbjct: 225 KTYDGPLTLGNPESYESALSIEV--ERF-FLTKVARPPPATTVVVNTEADGATQSTPIDP 281
Query: 269 --------YEYKSVEDPS--KVVPP-----------EQRIKGYRYGPQVVPISSAEWEAV 307
++ V++ V+ P ++ KGY YG V IS +
Sbjct: 282 MGGIEIGGSDFSKVQNTRVYSVIDPRAPGGKLEVDFDELEKGYEYGRTAVHISETDRNIT 341
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+ K K + ++GF N M + + + + + VA SAL AM E A+
Sbjct: 342 QLKTLKGLSIVGFISQDNYEPFLNMGESCIILPRKFSEQDEVAFSALIHAMIETKTYAVA 401
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ--- 424
R V + ++ ++ +L P V+E I FY LPFAEDVR + FP K +
Sbjct: 402 RFVAKDMKEPQLL-LLFPTVAENIV---CFYDVPLPFAEDVRTYPFPPLDKVITATGSVL 457
Query: 425 ------PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P+++ +A + V +D++ G + QP
Sbjct: 458 SKHRLLPDDKLNQAMSDYVDAMDISMFGTDDEGQP 492
>gi|225560795|gb|EEH09076.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 727
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 188/424 (44%), Gaps = 62/424 (14%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T+++ N L + E Y ++ V QDI + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDSNNPLWEKDEEESYANISVFQDISQILMPQIRELRELIKPSHTLEG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MV 153
D + ++++ +DM+++ Y + K K+ + L+TD + D+ + VS I + +V
Sbjct: 109 DAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DIDGIDGIVSKINEENIELV 164
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
G+ + E + +N++ L + ++ S +T+ +
Sbjct: 165 ILGVDFDD--PEYGFKEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVV 222
Query: 214 SPVTIFRGDLEL------SEKMKIKVWVYKKT-------------------GEEKFPTLK 248
+ F+GDL L S + I+V Y +T G+E +
Sbjct: 223 RSMPTFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSA 282
Query: 249 KYSDKAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQV 296
+ K PS ++ A T++V + K + V ++ KGY YG
Sbjct: 283 TLATKEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTA 338
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V IS ++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+S++
Sbjct: 339 VHISESDENITKLETEAALEFIGFIPSDNFDRYMNMSTSNIIIAQKTNNKAILALSSIIH 398
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFP 414
A+ E+ A+ R V + G+ +VV +L P++ PD LPFAED+R ++FP
Sbjct: 399 ALFELECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFP 452
Query: 415 SFSK 418
K
Sbjct: 453 PLDK 456
>gi|71650382|ref|XP_813890.1| KU80 protein [Trypanosoma cruzi strain CL Brener]
gi|70878816|gb|EAN92039.1| KU80 protein, putative [Trypanosoma cruzi]
Length = 744
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 215/481 (44%), Gaps = 45/481 (9%)
Query: 5 REALLLLLDVS-PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE-LTKE 62
R AL+ LD++ PS L + C R + +++ + E+ ++L GT + N +
Sbjct: 4 RSALVFALDLNCPSASLAL--AAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQNGQ 61
Query: 63 VGG--YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG---DFLDAIVVGVDMLIKKYGE 115
GG ++H+ V + ++ L H+ P C DFL+ + V D ++++
Sbjct: 62 KGGERFKHISVPCALAAPTVEFLEPLAHITPPPPPCERHEVDFLETLFV-CDHVLRERTA 120
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRMKNIVVRASLS 169
++ + LITDA DV K+D + + +V G+ V A+
Sbjct: 121 NKCYQRVVYLITDA-----HTDVARKDDMNTLLESFQQHGVSLVVIGIDFTETSVDATDD 175
Query: 170 GE------PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRG 221
E + + +N+ +L++ ++ V +L+ + + R I+ + R
Sbjct: 176 EERDDKSLTDLSLKAQNERVLHVMCSLLGEESKVVSLEEALQEVQELRRRKITQRALLRV 235
Query: 222 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
L + + +++ ++ KT EE+ PT+K+ + EV + ++ + + + +
Sbjct: 236 VLSIGD-VRLATQMFTKTQEERLPTMKRTTANG--------EEVYMKTIFQDLSEDAAPL 286
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
E +KGY YG +VP + + A+K K +++ +GF + + + V + +
Sbjct: 287 RKEDLLKGYHYGRSLVPCAREDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPL 346
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
+ A ++ RA+ N+ IVR V R V+G+ P+ +E+ ++ +F+
Sbjct: 347 ADDMVGAKAFRSIVRAIAADNRAMIVRFV-RTRDADPVLGLCVPSTNERRDV---LFFSP 402
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LP+AEDVR F+F + + + E A L +++ GK +L+P T NP +
Sbjct: 403 LPYAEDVRFFEFSDYKGMWGTSSDDGDDGEEARLLAAIVEDMTVGKS-VLRPRETFNPVI 461
Query: 462 E 462
+
Sbjct: 462 Q 462
>gi|161789042|sp|Q7RX73.2|KU80_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=Protein mus-52
Length = 725
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 189/444 (42%), Gaps = 50/444 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VLQ++ + +++LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSDK--APSTDKFATHE-----------VKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALEVLN 465
+ P E P NP + +N
Sbjct: 487 DDDGHPAEYAPIDDLYNPVIHHMN 510
>gi|164428817|ref|XP_956387.2| hypothetical protein NCU00077 [Neurospora crassa OR74A]
gi|157072293|gb|EAA27151.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 670
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 189/444 (42%), Gaps = 50/444 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VLQ++ + +++LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSDK--APSTDKFATHE-----------VKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALEVLN 465
+ P E P NP + +N
Sbjct: 487 DDDGHPAEYAPIDDLYNPVIHHMN 510
>gi|312069749|ref|XP_003137827.1| ku P80 DNA helicase [Loa loa]
gi|307767009|gb|EFO26243.1| ku P80 DNA helicase [Loa loa]
Length = 614
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 226/532 (42%), Gaps = 88/532 (16%)
Query: 2 ARTREALLLLLDVSPSMH------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEET 55
A + E ++L+DV +M+ + + + +I +K+ E ++LFG+E T
Sbjct: 14 ALSHECTVILIDVGANMNRKGIATTDMQLAKDTVEWIITRKIFTESADEFTLVLFGSELT 73
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLV-QSLKHLPQGTCAGDFLDAIVVGVDML---IK 111
+N +T + + + +Q K+ L+ + +K P + GDFL A++ +D + ++
Sbjct: 74 QNPVTVDENIFFCEEEMQQAKIDWLRLIDKEIK--PSKSTNGDFLAALIAALDYMRNHLE 131
Query: 112 KYGETYKGKKHLCLIT---------DALC---------------PLKDPDVG-TKEDQVS 146
+ ++ +++ L+T D C + P +G ED+
Sbjct: 132 SWPKSNITARNILLVTNLGGFNENVDEECIGAVINGMKALEINFNVIGPSIGMVSEDEDK 191
Query: 147 TIARQMVAFGLRMKNIVVRASLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDSTT 202
I+ + K S EP RV+ + D ++ F++ FV
Sbjct: 192 IISNEESTIQPEEKLSNAMRSFKIEPAERVLTDILKQTDGVIYSFAEALPVLQHFVSRKV 251
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT-------GEEKFPTL-------- 247
+LRG + +LEL +K+ + +YKK EK+ ++
Sbjct: 252 NLRGQK------------FNLELGIDLKLPLQMYKKIQTTDFKLAAEKYASITGTRLKRK 299
Query: 248 ---KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEW 304
+K D +V V + + SK+ E +KGY++G +VP ++ +
Sbjct: 300 TLYEKCVKDGEVDDGLTAMDVDVGRSDCASQGSSKIFAKEI-VKGYKFGTTIVPYNAEDQ 358
Query: 305 EAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPG-NSRATVAVSALARAMKEMN 362
+ +K E + +KL+ FT S IL HY M + P + A VA+SAL AM +
Sbjct: 359 KEYGWKHENRCLKLIQFTKRSQILEHYLMDGGACYFIPPALDKNACVAISALVNAMIAED 418
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
VA+ R V+ Q ++G L P S+K D F LPF ED R FP + P +
Sbjct: 419 SVALTRYVYNAASQPRIMG-LFPRRSKK--GVDMFVGIQLPFYEDFRGLNFPPLNS-PAT 474
Query: 423 WQPNEQQQEAADNLVKMLDL------APSGK-GEILQPELTPNPALEVLNIC 467
+P A + V+ +DL + +G+ E L+P PNP L+ N+C
Sbjct: 475 -EPKNDHLSAMHSFVQAMDLTKAHFNSQTGQFEESLRPRDVPNPKLQ--NVC 523
>gi|46401620|dbj|BAD16623.1| MUS52 [Neurospora crassa]
Length = 661
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 189/444 (42%), Gaps = 50/444 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VLQ++ + +++LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSDK--APSTDKFATHE-----------VKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALEVLN 465
+ P E P NP + +N
Sbjct: 487 DDDGHPAEYAPIDDLYNPVIHHMN 510
>gi|325089084|gb|EGC42394.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 723
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 188/420 (44%), Gaps = 62/420 (14%)
Query: 45 VGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLD 100
+GVI T+++ N L + E Y ++ V QDI + ++ L+ L P T GD +
Sbjct: 53 LGVIGLKTDDSNNPLWEKDEEESYANISVFQDISQILMPQIRELRELIKPSHTLEGDAIS 112
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGL 157
++++ +DM+++ Y + K K+ + LITD + D+ + VS I + +V G+
Sbjct: 113 SLILAIDMIVR-YCKKLKYKRKIVLITDGTGAM---DIDGIDGIVSKINEENIELVILGV 168
Query: 158 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ E + +N++ L + ++ S +T+ + +
Sbjct: 169 DFDD--PEYGFKEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMP 226
Query: 218 IFRGDLEL------SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSD 252
F+GDL L S + I+V Y +T G+E + +
Sbjct: 227 TFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATIAT 286
Query: 253 KAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
K PS ++ A T++V + K + V ++ KGY YG V IS
Sbjct: 287 KEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHIS 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETEAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD-SFYFNV-LPFAEDVREFQFPSFSK 418
+ A+ R V + G+ +VV +L P++ PD V LPFAED+R ++FP K
Sbjct: 403 LECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDK 456
>gi|134076155|emb|CAK48968.1| unnamed protein product [Aspergillus niger]
Length = 725
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 186/440 (42%), Gaps = 76/440 (17%)
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDM 108
ET NEL + Y H+ VL IK L+ ++ L P T GD + A+V+ + M
Sbjct: 73 ETANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAISALVLAIQM 128
Query: 109 LIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----QMVAFGLRM 159
+I + + K K+ + L+T+ P+ ++ KED + I +G++
Sbjct: 129 IITQC-KKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFDDPEYGVKE 187
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 219
++ R + EN+ LL ++ ++ + + + F
Sbjct: 188 EDKDPRKA-----------ENETLLRSLAEDCEGAYGTLEQAVAELETPRVKTTRITASF 236
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE--------------- 264
+G L+L + V + E++ + Y KAPS +F
Sbjct: 237 KGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNEEEMGMAAAAAGSQE 292
Query: 265 ------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
V+ + Y+ + E+ + V EQ KGY YG +VPIS + + +
Sbjct: 293 GSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPISETDENITTLETFAA 352
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+ R V ++
Sbjct: 353 IELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAVARMVLKEN 412
Query: 375 QQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------- 424
+ V+V VL P++ PD LPFAEDVR ++FP + VS +
Sbjct: 413 KPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVITVSGKVVTQHRN 466
Query: 425 -PNEQQQEAADNLVKMLDLA 443
PN+ A D VK ++L
Sbjct: 467 LPNDDLLNAMDKYVKSMELT 486
>gi|238496249|ref|XP_002379360.1| Ku family DNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220694240|gb|EED50584.1| Ku family DNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 742
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 181/429 (42%), Gaps = 68/429 (15%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GVI T+ET NEL +V + H+ VL ++K L+ ++ L P T GD +
Sbjct: 53 MGVIGLRTDETSNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIARQMVA 154
AI++ + M+I + + K ++ + L+T+ + D D+G KED + + ++
Sbjct: 109 SAIILAIQMIIT-HCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVMSVIC 167
Query: 155 FGLRMKNIVVRA-------------SLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDST 201
+ + K + + +PH EN+ LL + +
Sbjct: 168 YQIATKQKLTSSRGIDFDDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGTFEQA 224
Query: 202 TSLRGARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY----- 250
+ + + + V F+G L+L ++I V Y +T K PT +
Sbjct: 225 VAELDIPRVKSVRSVASFKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFVLRSE 284
Query: 251 ----------------SDKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKG 289
+ K + V+ Y+ VED S K+ + ++ KG
Sbjct: 285 PEAGQEEAESSEAAAATQKGSQSGDAGLTAVRTMRTYQ-VEDKSAPGGKIDIERDELAKG 343
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
Y YG V IS + ++L+GF R+ +M + N+ IA+ N +A +
Sbjct: 344 YEYGRTAVHISETDENITILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRANDKAAL 403
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S+ A+ E+ A+ R V ++ + V+V +L P++ + + LPFAEDVR
Sbjct: 404 ALSSFIHALFELECYAVARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFAEDVR 459
Query: 410 EFQFPSFSK 418
++FP K
Sbjct: 460 TYRFPPLDK 468
>gi|383851774|ref|XP_003701406.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Megachile rotundata]
Length = 705
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 205/475 (43%), Gaps = 62/475 (13%)
Query: 5 REALLLLLDV---SPSMH---SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+L++++ SP S+L + + R I+K + EV +I+ G+ T+N
Sbjct: 7 KESLMLIINIGVTSPGKSNDSSLLEKAKDIAKRKIEKMIFLRPKDEVAIIVMGSSNTKNS 66
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
L EH++ D +V + L++ L +L ++++A+ V+ + + +
Sbjct: 67 LNA-----EHIEEFADFQVPNWDLIRKLVNLKGTNYCSNWVEALQAAVEFMKENICDA-- 119
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
K + LI+ D +ED +S + G SL + I
Sbjct: 120 SMKRIILIS---------DFNEEEDIISQFEAVFLFRG--------EESLDERSESSLKI 162
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 238
L ++ K S F D+ +SLR + T F LEL +K KI V Y K
Sbjct: 163 SEQLLKDLHKKISGQHITFDDAISSLRFYTEMPKKPSPTYFT--LELVDK-KIPVVSYVK 219
Query: 239 TGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVP 298
K P+ ++ D + KV+ + + V+ ++ + GY+YG P
Sbjct: 220 VDTGKLPSWRRAKD-----------DQKVETKTQYVDRQRTTYTKDEIVPGYKYGGTFFP 268
Query: 299 ISSAEWEAVKFKP-EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
+ + E + +K KS K+ FT+ NI L + Y + ++ + T +L +
Sbjct: 269 VEKEQEEKMSYKSGPKSYKIHCFTNRDNINLEYLYGNNTHIILPSNKVKETTKTFYSLVQ 328
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQF 413
AM + N VAIVR V+R+ +V VL P I+IPD + V L FAED R +
Sbjct: 329 AMHKTNSVAIVRKVYRENLAPKMV-VLFPC----IDIPDEPWCLVEIILTFAEDRRVMET 383
Query: 414 PSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALE 462
V Q + +Q EA DNL+ L L+ +G + P P+PA++
Sbjct: 384 RPIKS--VVKQLSSEQNEAIDNLIDSLMLSDTGDSCELDERQYFLPGCVPDPAVQ 436
>gi|154341439|ref|XP_001566671.1| putative KU80 protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063996|emb|CAM40187.1| putative KU80 protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 792
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 218/497 (43%), Gaps = 61/497 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEV 63
+++A +L+LD++ S + L + LC+R++ K++Y EV VIL GTE++ + L +
Sbjct: 2 SKDATVLVLDITLSRAAALEEACDLCTRILTDKMVYSPLDEVAVILAGTEKSRSALYDQS 61
Query: 64 GG--YEHVKV-------LQDIKVVDGHLVQSLKHLPQG-------TCAGDFLDAIVVGVD 107
G Y+H+ V + I V + LP G T A DF+DA+ V V
Sbjct: 62 GQARYQHITVAVELGPATEKILVPIAATRAGVVALPGGATVQRPITEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI-ARQ-----MVAFGLRMKN 161
+L + + + + + L+TDA +V KED + I A Q +V G +
Sbjct: 122 LLQARTSQ-RRCNRCIYLLTDA-----RHEVRHKEDLLFLIDALQHDQITLVVIGFDFQA 175
Query: 162 IVVRA--------SLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDSTTSLR--GA 207
+ S +G+ V + +N+ +L + + + +L
Sbjct: 176 LPAGTASQEECDESSTGDTSAWVGLDRKAQNEKVLGALCTELGPPSTLISPAEALDRLSL 235
Query: 208 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
R I +F+ L + + +++ ++ T EE+ P L++ ST A V
Sbjct: 236 LHCRKIRQQPMFKIALRIGD-VRLATQLFTLTQEERLPALRR------STQDGADVVQSV 288
Query: 268 DYEYKS-VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
+Y S V++ + + E+R++ + +G V S A+ E +K K ++++ +GF + +
Sbjct: 289 EYVTPSDVDEQPRALAKEERMEVFFFGADRVSCSEADREEMKVKGPRALEAIGFVGETEV 348
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
M + G+ +AL AM K +VR V R + ++ V
Sbjct: 349 EPCLLMGGTRALLPLAGDHAGQRGFNALVDAMVSSGKAMLVRLV-RTAHATPLLCVCFAR 407
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAADNLVKMLDLAPS 445
V+E + LPFAED+R + FS++P V + E+Q D L+ L S
Sbjct: 408 VAETASGQRHLVLAPLPFAEDMRALR---FSEYPEVRFSKAEEQ--LMDELIDGL----S 458
Query: 446 GKGEILQPELTPNPALE 462
G +L P+ T NP L+
Sbjct: 459 VDGSVLAPQDTFNPVLQ 475
>gi|452846847|gb|EME48779.1| hypothetical protein DOTSEDRAFT_67726 [Dothistroma septosporum
NZE10]
Length = 728
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 207/472 (43%), Gaps = 57/472 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDF 98
K GV+ T++T+N + E Y++VKVLQ + + V+ L+ + T AGD
Sbjct: 49 KTAMAGVVGLRTDDTDNPMDVE-ESYQNVKVLQGLSQILMPDVRRLRKELVVSQTDAGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ ++VV + M+++ + K ++ + L+TDA P+ D+ + ++ +V G+
Sbjct: 108 ISSLVVAIHMIVET-CKKLKYERTIVLVTDARAPMDTDDLLQIKRKILEDGIDLVILGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ E ++ +N+ + K + + + +T+ PV
Sbjct: 167 FDD--TEYGFKEECKDQIKADNEEIFKQLCKDCNGTFGTLAQAVAEMQVPRTKSTRPVPS 224
Query: 219 FRGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFATHE-V 265
++G L L + + I V Y KT K PT K+ + ST + E V
Sbjct: 225 YKGFLTLGNPEMFEDALTIDVERYPKTMVAKAPTASKFVLKQGVQEATQSTATLSNGEGV 284
Query: 266 KVD-------------YEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
V+ Y+ P K V E+ KGY YG V IS ++ F+
Sbjct: 285 PVEEGDGLAGIMTARTYQVNDENAPGGKKDVEREELSKGYEYGRTAVHISESDQNVTAFE 344
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
++ + ++GF R+ + N+ +++ N +A++A+S+L A+ E++ A+ R V
Sbjct: 345 SKQGLDIIGFVTKVQYQRYLDISRANVIMSQKHNDKASMALSSLIHALYELDSYAVARLV 404
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--- 424
+ + V+ +L PN+ PD Y LPFAED+R ++FP + VS +
Sbjct: 405 PKDMKDPKVI-ILAPNIE-----PDFECLYDIELPFAEDLRSYKFPPLDRVVTVSGKVLK 458
Query: 425 -----PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALEVLN 465
P+++ Q+A + V ++L+ K E + T +P L LN
Sbjct: 459 VHRNLPSDELQDAMSDYVDGMELSTFSKDDEGEDAEYAHFDETFSPMLHRLN 510
>gi|407852203|gb|EKG05832.1| KU80 protein, putative [Trypanosoma cruzi]
Length = 744
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 216/482 (44%), Gaps = 47/482 (9%)
Query: 5 REALLLLLDVS-PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE-LTKE 62
R AL+ LD++ PS L + C R + +++ + E+ ++L GT + N +
Sbjct: 4 RSALVFALDLNCPSASLAL--AAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQNGQ 61
Query: 63 VGG--YEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLIKKYGE 115
GG ++H+ V + ++ L H+ P DFL+ + V D ++++
Sbjct: 62 KGGERFKHISVPCALAAPTVEFLEPLAHITPTPPPCERHEVDFLETLFV-CDHVLRERTA 120
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ-------MVAFGLRMKNIVVRASL 168
++ + LITDA DV K D+++T+ +V G+ V A+
Sbjct: 121 NKCYQRVVYLITDA-----HTDVARK-DEMNTLLESFQQHGVSLVVIGIDFTETSVDATD 174
Query: 169 SGE------PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFR 220
E + + +N+ +L++ +++ V +L+ + + R I+ + R
Sbjct: 175 DEERDDKSLTDLSLKAQNERVLHVMCSLLGEESMVVSLEEALQEVQELRRRKITQRALLR 234
Query: 221 GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV 280
L + + +++ ++ KT EE+ PT+K+ + EV + ++ + + +
Sbjct: 235 VVLSIGD-VRLATQMFTKTQEERLPTMKRTTANG--------EEVYMKTIFQDLSEDAAP 285
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+ E +KGY YG +VP + + A+K K +++ +GF + + + V + +
Sbjct: 286 LRKEDLLKGYHYGRSLVPCAREDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMP 345
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A ++ RA+ N+ IVR V R V+G+ P+ +E+ D +F+
Sbjct: 346 LADDMVGAKAFRSIVRAIAADNRAMIVRFV-RTRDTDPVLGLCVPSTNER---RDVLFFS 401
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LP+AEDVR +F + + + +E A L +++ GK +L+P T NP
Sbjct: 402 PLPYAEDVRFLEFSDYKGMWGNSNDDGDDEEEARLLAAIVEEMTVGKS-VLRPRETFNPV 460
Query: 461 LE 462
++
Sbjct: 461 IQ 462
>gi|346327581|gb|EGX97177.1| Ku family DNA helicase, putative [Cordyceps militaris CM01]
Length = 730
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 195/464 (42%), Gaps = 53/464 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T+ET N L + GYE++ VLQ++ + ++SL+ P T +GD + AI
Sbjct: 53 VGVVGLRTDETRNPLMAD-DGYENISVLQELGPMTMTSLKSLQTSIKPSKTYSGDAISAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV VDM I + + K + + +ITDA + D+G +++ + G+ +
Sbjct: 112 VVAVDM-IDTFTKKLKWTRKIVMITDAQSAIDPDDIGDIAHKINDSNITLTVLGVDFDD- 169
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFR 220
E +N+ L + + + V++ + R + + P +
Sbjct: 170 -PEYGFKEEDKSPTKADNEKTLKSLADQCTGGVFASIVEAIDEIDTPR-VKQVKPYKTYD 227
Query: 221 GDLELSE------KMKIKVWVYKKT-------------GEEKFPTLKKYSDKAPSTDKFA 261
G L L + + I V Y KT E+ T ++ + D
Sbjct: 228 GTLVLGDPEKFPSALNINVERYFKTHVARQIAASTVVLKSEQGGTQSTHTLEEEPMDGVE 287
Query: 262 THEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
VK YK V P K V E KG+ YG V IS +E K + KS
Sbjct: 288 FSAVKQARTYK-VNAPDAPGGKKDVEFETLAKGFEYGRTAVHISESEHNITKLETTKSFS 346
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+LGF M DV + A + ++ +A+S+L + E+ A+ R V + G++
Sbjct: 347 ILGFIPWDKWEPFLGMGDVCVTHARKFDEKSELAMSSLVWGLNELESYAVARLVTKDGKE 406
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 427
++V +L P + ++ + Y LPFAEDVR ++FP K V+ + P +
Sbjct: 407 PILV-LLAPGLEPEL---ECLYDIPLPFAEDVRAYKFPPLDKVITVTGKTLTTHRLLPTD 462
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
+ EA V +DL G + +P E P NP + +N
Sbjct: 463 ELNEAMGEYVDAMDLDSYGMDDQGEPAEFAPIDETYNPIIHRIN 506
>gi|121795545|sp|Q2MHH1.1|KU80_ASPSO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|85677430|dbj|BAE78504.1| Ku80 protein [Aspergillus sojae]
Length = 725
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 183/427 (42%), Gaps = 73/427 (17%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +V + H+ VL +IK L+ ++ L P T
Sbjct: 49 KTATMGVIGLRTDETSNELEDDVH-FSHIAVLSNIK---QFLMPDIRKLEDELKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR 150
GD + AI++ + M+I + + K ++ + L+T+ + D D+G KED + +
Sbjct: 105 GDAISAIILAIQMIIT-HCKKLKYRRKIALVTNGQGRMSDEDLGEIVKKVKEDNIELVVM 163
Query: 151 QM----VAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLR 205
+ +G + ++ R + E +R ++E+ D + F + + L + S+R
Sbjct: 164 GIDFDDPEYGYKEEDKDPRKA-ENETLLRTLVEDCDGVYGTFEQ--AVAELDIPRVKSVR 220
Query: 206 GARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY--------- 250
V F+G L+L ++I V Y +T K PT +
Sbjct: 221 S---------VASFKGYLQLGNPEDYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAG 271
Query: 251 ------------SDKAPSTDKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYG 293
+ K + V+ Y+ VED S + + KGY YG
Sbjct: 272 QEEAESSEAAAATQKGSQSGDIGLTTVRTMRTYQ-VEDKSAPGGKIDIERDDLAKGYEYG 330
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSA 353
V IS + ++L+GF R+ +M + N+ IA+ N +A +A+S+
Sbjct: 331 RTAVHISETDENITILDTFAGLELMGFIQTDRYQRYMHMSNTNIIIAQRANDKAALALSS 390
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREF 411
A+ E+ A+ R V ++ + V+V +L P++ PD LPFAEDVR +
Sbjct: 391 FIHALFELECYAVARLVVKENKPPVIV-LLAPSIE-----PDYECLLEVQLPFAEDVRTY 444
Query: 412 QFPSFSK 418
+FP K
Sbjct: 445 RFPPLDK 451
>gi|340520410|gb|EGR50646.1| hypothetical protein TRIREDRAFT_58213 [Trichoderma reesei QM6a]
Length = 731
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 213/494 (43%), Gaps = 85/494 (17%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQK-KLIYGKNHE---VGVILFGTEET 55
+EA + ++D+ SM +V D++ S + K + N + VGV+ F T+ET
Sbjct: 4 KEATVFIIDLGASMAAVNGGREESDLDWSMSYVWDKISNVVASNRKTLCVGVVGFRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDFLDAIVVGVDMLIKKY 113
+ L+++ GYE++ +LQ + + +++L K P T GD + AIV+ VDM I KY
Sbjct: 64 NHTLSED--GYENISILQPLGPMSMSSLKALQPKVKPSRTVEGDAISAIVIAVDM-IDKY 120
Query: 114 GETYKGKKHL-CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
+ K K+ + C D PD G KE+ ++ +Q E
Sbjct: 121 TKKNKWKRQISCEGVD----FDAPDYGFKEEDKPSVKKQ------------------NEE 158
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEK---- 228
++ +++ + F+ V++ L R + + P + G L L +
Sbjct: 159 TLKKLVDGCGDDSRFAS-------MVEAIDDLNEPR-AKSVKPYKTYEGLLTLGDPKNAP 210
Query: 229 --MKIKVWVYKKTGEEKFPTLK-----------KYSDKAPSTDKFATHEVKVDYEYKSVE 275
++I+V Y KT + P +D+ D V+ YK V
Sbjct: 211 AVVEIRVERYFKTHLARPPAASTVVVKEEQAGPSQADEDEQMDGAELTAVRQARTYK-VN 269
Query: 276 DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY 330
DP + V E KGY YG V IS ++ K EKS K++GF
Sbjct: 270 DPDAPGGKRDVEFESLAKGYEYGRTAVHISESDQNVTKLATEKSFKIIGFVQKEKYEMLL 329
Query: 331 YMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 390
+ + + +A + ++ +A S+L A+ E++ A+ R V + + ++V +L P +
Sbjct: 330 NLGETCVTVASKYDEKSELAFSSLVWALSELDAYAVARLVTKDQKDPMLV-LLMPYME-- 386
Query: 391 INIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKM 439
PD Y LPFAED+R +QFP + VS Q P+++ +A + V
Sbjct: 387 ---PDYVCLYDVPLPFAEDIRTYQFPPLDRVVTVSGQTLTNHRLLPSDELNQAMSDYVDA 443
Query: 440 LDLAPSGKGEILQP 453
+D++ G E QP
Sbjct: 444 MDISSYGIDEDGQP 457
>gi|400597468|gb|EJP65201.1| Ku family DNA helicase, putative [Beauveria bassiana ARSEF 2860]
Length = 716
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 216/516 (41%), Gaps = 68/516 (13%)
Query: 5 REALLLLLDVSPSM---HSVLPDVEKLCS-RLIQKKL--IYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + S R + K+ I N + +G + T+ T
Sbjct: 4 KEATVFILDLGASMGKSHSGRSESDLDWSMRYVWDKITDIVSANRKTLCIGAVGLRTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
N+L E GY+++ VLQ++ + + SLK L P T GD + AIVV VDM I
Sbjct: 64 MNKLMDE-DGYDNISVLQELGPM---TMTSLKTLQTSIKPSKTFDGDAISAIVVAVDM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
+ + K + + +ITDA + D+G +++ + G+ +
Sbjct: 119 DTFTKKLKWNRKIVMITDAQSGIDPDDIGDIAHKINDSNIHLTVLGVDFDD--PEYGYKE 176
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFRGDLELSE- 227
E EN+ L + + + V++ + R + + P + G L L +
Sbjct: 177 ENKSPAKAENEKTLKALTDQCTDSVFASIVEAIDEIDTPR-VKQVKPYKSYDGTLVLGDP 235
Query: 228 -----KMKIKVWVYKKTGEEKFPT-----LKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
M I V Y KT + T LK S ST + D E+ +V+
Sbjct: 236 DKFPFAMSINVERYFKTHLARQMTASTVVLKSESGGTQSTQTLEEEPIN-DVEFSAVKQA 294
Query: 278 S--KVVPP-----------EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
KV P E KG+ YG V IS +E K + KS ++GF
Sbjct: 295 RTYKVNAPDAPGGKKDVEFESLAKGFEYGRTAVHISESEHNITKLETIKSFSIVGFIPWE 354
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
M +V + A+ + ++ +A+S+L + E+ AI R V + G+ +V +L
Sbjct: 355 KYEPFLSMGEVCVTHAKKFDEKSELAMSSLVWGLNELESYAIARLVTKDGKDPTLV-LLA 413
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADN 435
P + ++ + Y LPFAED+R ++FP K V+ Q P E+ EA
Sbjct: 414 PGLEPEL---ECLYDVPLPFAEDIRAYKFPPLDKVVTVTGQTLTTHRLLPTEELTEAMGE 470
Query: 436 LVKMLDLAPSGKGEILQP-ELTP-----NPALEVLN 465
V +DL G E +P E P NP + +N
Sbjct: 471 YVDAMDLDSYGMDENGEPAEFAPFDETYNPVIHRIN 506
>gi|240280661|gb|EER44165.1| Ku80 [Ajellomyces capsulatus H143]
Length = 723
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 188/420 (44%), Gaps = 62/420 (14%)
Query: 45 VGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLD 100
+GVI T+++ N L + E Y ++ V Q+I + ++ L+ L P T GD +
Sbjct: 53 LGVIGLKTDDSNNPLWEKDEEESYANISVFQNISQILMPQIRELRELIKPSHTLEGDAIS 112
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGL 157
++++ +DM+++ Y + K K+ + LITD + D+ + VS I + +V G+
Sbjct: 113 SLILAIDMIVR-YCKKLKYKRKIVLITDGTGAM---DIDGIDGIVSKINEENIELVILGV 168
Query: 158 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ E + +N++ L + ++ S +T+ + +
Sbjct: 169 DFDD--PEYGFKEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMP 226
Query: 218 IFRGDLEL------SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSD 252
F+GDL L S + I+V Y +T G+E + +
Sbjct: 227 TFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATIAT 286
Query: 253 KAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
K PS ++ A T++V + K + V ++ KGY YG V IS
Sbjct: 287 KEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHIS 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETEAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD-SFYFNV-LPFAEDVREFQFPSFSK 418
+ A+ R V + G+ +VV +L P++ PD V LPFAED+R ++FP K
Sbjct: 403 LECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDK 456
>gi|317147298|ref|XP_003189905.1| ATP-dependent DNA helicase II subunit 2 [Aspergillus oryzae RIB40]
Length = 722
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 175/412 (42%), Gaps = 51/412 (12%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GVI T+ET NEL +V + H+ VL ++K L+ ++ L P T GD +
Sbjct: 53 MGVIGLRTDETSNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
AI++ + M+I + + K ++ + L+T+ + D D+G +V ++V G+
Sbjct: 109 SAIILAIQMIIT-HCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVMGIDF 167
Query: 160 KNIVV-RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ +PH EN+ LL + + + + + + V
Sbjct: 168 DDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSVRSVAS 224
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---------------------S 251
F+G L+L ++I V Y +T K PT + +
Sbjct: 225 FKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEAAAAT 284
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEA 306
K + V+ Y+ VED S + ++ KGY YG V IS +
Sbjct: 285 QKGSQSGDAGLTTVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISETDENI 343
Query: 307 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
++L+GF R+ +M + N+ IA+ N +A +A+S+ A+ E+ A+
Sbjct: 344 TILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELECYAV 403
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
R V ++ + V+V +L P++ + + LPFAEDVR ++FP K
Sbjct: 404 ARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDK 451
>gi|121795547|sp|Q2MHH2.1|KU80_ASPOR RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|85677428|dbj|BAE78503.1| Ku80 protein [Aspergillus oryzae]
Length = 725
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 177/412 (42%), Gaps = 51/412 (12%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GVI T+ET NEL +V + H+ VL ++K L+ ++ L P T GD +
Sbjct: 53 MGVIGLRTDETSNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
AI++ + M+I + + K ++ + L+T+ + D D+G +V ++V G+
Sbjct: 109 SAIILAIQMIIT-HCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVMGIDF 167
Query: 160 KNIVV-RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ +PH EN+ LL + + + + + + V
Sbjct: 168 DDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSVRSVAS 224
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---------------------S 251
F+G L+L ++I V Y +T K PT + +
Sbjct: 225 FKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEAAAAT 284
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISSAEWEA 306
K + V+ Y+ VED S K+ + ++ KGY YG V IS +
Sbjct: 285 QKGSQSGDAGLTTVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISETDENI 343
Query: 307 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
++L+GF R+ +M + N+ IA+ N +A +A+S+ A+ E+ A+
Sbjct: 344 TILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELECYAV 403
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
R V ++ + V+V +L P++ + + LPFAEDVR ++FP K
Sbjct: 404 ARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDK 451
>gi|119498147|ref|XP_001265831.1| Ku family DNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119413995|gb|EAW23934.1| Ku family DNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 718
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 189/463 (40%), Gaps = 69/463 (14%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGKSMGEKRNGRSMTDLEWAMQYVWDRITATVATGRKTATIGVIGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKY 113
NEL + ++H+ VL +I+ ++ L L P T GD + AI++ + M++ Y
Sbjct: 64 SNELDDD-PHFKHISVLSEIQQFLMPDIRRLDALIKPSKTDKGDAISAIILAIQMIVT-Y 121
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ K K+ + L+T+ + + D+ ++ +V G + G+
Sbjct: 122 CKKLKYKRKIVLVTNGQGWMSNEDLDQITKKIKEDNIDLVVLGTDFDDPEYGFKEEGKDP 181
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------ 227
+ EN+ LL + ++ S + + + V F+G L+L
Sbjct: 182 RKA--ENEALLRGLVEDCDGAYGTLEQAISEMDIPRAKKVRTVATFKGFLQLGNPEEYDT 239
Query: 228 KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH-EVKVDYEYKSVEDPSKVVPP--- 283
++I V Y +T Y K PS F +V + E +P K P
Sbjct: 240 ALRIPVERYYRT----------YVAKPPSASSFVLRSDVGAEEEQGESSEPPKSPPEGGA 289
Query: 284 --------------------------EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
E+ KGY YG V IS + + +++L
Sbjct: 290 LTSVRNLRTYEVPDENAPGGKIDVEREELAKGYEYGRTAVHISETDENITTLETYAALEL 349
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
+GF R+ +M N+ I + GN +A++A+S+ A+ E+ A+ R V ++ +
Sbjct: 350 VGFIQTDKYDRYMHMSTTNIIIGQRGNDKASLALSSFIHALFELECYAVARLVVKENKPP 409
Query: 378 VVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
V+V +L P++ PD LPFAEDVR ++FP K
Sbjct: 410 VMV-LLAPSIE-----PDYECLIEVQLPFAEDVRTYRFPPLDK 446
>gi|157872149|ref|XP_001684623.1| putative KU80 protein [Leishmania major strain Friedlin]
gi|68127693|emb|CAJ05844.1| putative KU80 protein [Leishmania major strain Friedlin]
Length = 798
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 213/502 (42%), Gaps = 71/502 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEV 63
++ A++L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L ++
Sbjct: 2 SKGAVVLVLDITLPRAAALVEACNLCDRILTDKMIYAPSDEVSVILAGTEKSRSALYEQS 61
Query: 64 --GGYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVD 107
Y H+ V ++ + + LP+G A DF+DA+ V V
Sbjct: 62 VQARYNHITVAAELGPATSLTLAPIAATRAGVAVLPEGETVRPSIAEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTI---ARQMVAF---GLRM 159
+L + T + K + C+ +TDA +V KED +S I R VA G
Sbjct: 122 VLQAR---TSQKKYNRCIYFLTDA-----RHEVRHKEDLLSLIDILQRDQVALVVIGFDF 173
Query: 160 KNIVVRASLSGEPHMRVII------------ENDNLLNIFSKKSSAKTLFVD-----STT 202
+ + A GE + + +N+ +L + + V ++
Sbjct: 174 QALPAPADSQGEFNESTTVVPSAWAALDRKAQNERILAALCTELGPPSTLVSPAEALASL 233
Query: 203 SLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
SL R+ R + V + GD+ L+ ++ + T EE+ P+L++ + D
Sbjct: 234 SLLRCRRIRQQPVLKVALRMGDVRLATQL------FTLTQEERLPSLRRSTQDG--VDVA 285
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
T E V VE+ + E+R++ + G + S A+ EA++ K ++++ +GF
Sbjct: 286 QTIEYVV---LGGVEERPCALAKEERVEAFFLGVDRISCSEADREAMRVKGPRALEAIGF 342
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 343 VGEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSL 401
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 402 CVCFARTAGSSAAQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGL 457
Query: 441 DLAPSGKGEILQPELTPNPALE 462
+ S +L P T NP L+
Sbjct: 458 SVDDS----VLAPHDTFNPVLQ 475
>gi|350290744|gb|EGZ71958.1| SPOC domain-like protein [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 187/444 (42%), Gaps = 50/444 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VL+++ + ++ LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLKELGPMTMTSLRVLKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSDK--APSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWDEDHGVPFSGVGFQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALEVLN 465
+ P E P NP + +N
Sbjct: 487 DDDGHPAEYAPVDDLYNPVIHHMN 510
>gi|336469609|gb|EGO57771.1| protein Ku80 [Neurospora tetrasperma FGSC 2508]
Length = 725
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 187/444 (42%), Gaps = 50/444 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VL+++ + ++ LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLKELGPMTMTSLRVLKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSDK--APSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWDEDHGVPFSGVGFQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALEVLN 465
+ P E P NP + +N
Sbjct: 487 DDDGHPAEYAPVDDLYNPVIHHMN 510
>gi|213409423|ref|XP_002175482.1| Ku80 [Schizosaccharomyces japonicus yFS275]
gi|212003529|gb|EEB09189.1| Ku80 [Schizosaccharomyces japonicus yFS275]
Length = 686
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 191/463 (41%), Gaps = 60/463 (12%)
Query: 28 LCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK 87
L RL++ K K +G++ F T+E+ N+L E Y ++ V I+ +Q L+
Sbjct: 40 LSQRLLENK----KTDVIGIVGFKTDESRNDLV-EQEAYWNIAVFYPIQTAKFAQLQDLR 94
Query: 88 HLPQG--TCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQV 145
T GD L AIVV D LI +Y + K K L + T A + D
Sbjct: 95 PRLSASKTMQGDLLSAIVVSFD-LIGRYCKANKWTKELFIGTGARGTIDFEDS------- 146
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 205
IA Q+ + + + R L E H DN L F +K + K L +
Sbjct: 147 DGIAEQIAQHDVHITLGLTR-DLKLERHTY-----DNQLLQFLEKCNGKLLTAQNLMEEA 200
Query: 206 GARKTRDISPVTIFRGDLEL--------SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
R + PV IFRG L L S I+ + Y + + T S K PS
Sbjct: 201 QRPPIRKVKPVPIFRGILSLGNPQDPDASLAFPIERYPYTRIAKPPVSTAFDASAK-PSA 259
Query: 258 D-------------KFATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPI 299
D H ++ + V+D + V + GY YG ++PI
Sbjct: 260 DPSGADNDEVMSQPNLGMHSDVVSTIRTYVVHDPVKDETFEVDRKDLESGYSYGRTIIPI 319
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
SS + + + + +++LGF S Y+M + NL + + + + +++ AM
Sbjct: 320 SSTDEDIMSLDTQAGLEVLGFAPKSCFPPFYFMSETNLIVNKKDDEQTATQLTSFVEAMI 379
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSK 418
+ ++ A+ R V + +++ VL P++ + +V LP+AEDVR F FPS
Sbjct: 380 QEDRYALARFVNKNHNGPILL-VLIPHIENGTHC----LIDVQLPYAEDVRAFSFPSLEH 434
Query: 419 FPVSWQPNEQQQEAADNLVK--MLD---LAPSGKGEILQPELT 456
+ + + Q A D V +LD + S K + +P+ +
Sbjct: 435 V-TTGEEKMRVQNAVDAYVSSMLLDNPAIQQSSKAPVFEPQFS 476
>gi|444708075|gb|ELW49194.1| X-ray repair cross-complementing protein 5 [Tupaia chinensis]
Length = 652
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 208/482 (43%), Gaps = 91/482 (18%)
Query: 16 PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDI 75
P S +K+ + +Q+++ E+ ++LFGT+ T N L E Y+++ V + +
Sbjct: 12 PGEESAFEQAKKVMTMFLQRQVFAESKDEIALVLFGTDGTNNTLADE-DQYQNITVHRHL 70
Query: 76 KVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLK 134
+ D L++ ++ Q G+ DFLDA++ M+ K+ G +G L +D P
Sbjct: 71 MLPDFDLLEDVESKIQPGSQQSDFLDALI----MIDKEDGTGDRGDGKL--RSDHHGP-S 123
Query: 135 DPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
P G E Q + QMV KN+++ SL G+ D L I+S S +
Sbjct: 124 FPQKGLTEQQKEGV--QMV------KNLMM--SLEGK---------DGLDEIYSFSESLR 164
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPT-LKKYSDK 253
L V + R+ P + L + + IK+ YK +P L S+
Sbjct: 165 QLCV-------FKKIQRNSVP---WPCQLTIGSNLAIKIVAYKSRNSVPWPCQLTIGSNL 214
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
A +K+ YKS+ + GYRYG +VP S + E +K+K E
Sbjct: 215 A----------IKI-VAYKSMLFSCSL--------GYRYGSDIVPFSKVDEEQMKYKSEG 255
Query: 313 KSVKLLGFTDAS----------NILRHYYMKD----VNLF--------IAEPGNSRATVA 350
K +LGF +S I++ + +D +NLF A + A VA
Sbjct: 256 KCFSVLGFCKSSEVPINLFTGYQIVKVFAARDDEVPINLFTGYQIVKVFAARDDEPAAVA 315
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 410
S+L A+ E++ VAI+R + + + VG+ P++ + + + LPF ED+R+
Sbjct: 316 FSSLVHALDELDMVAIIRYAY-HNKSNPQVGMAFPHIKDTY---ECLMYVQLPFMEDLRQ 371
Query: 411 FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALEVLN 465
+ F SF + + P E Q A D L+ + L + E +L PNP + L
Sbjct: 372 YMFSSF-RNSKKYIPTEAQLSAVDALIDSMSLVKKNEEEDTVEDLFLTTKIPNPQFQRLF 430
Query: 466 IC 467
C
Sbjct: 431 QC 432
>gi|212542997|ref|XP_002151653.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210066560|gb|EEA20653.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 717
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 203/470 (43%), Gaps = 85/470 (18%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DV SM H+ D+ L R + K+ K +GV+ T+ET
Sbjct: 4 KEATVYIVDVGKSMKQHNNGRDISDLDWAMRYVWDKITTTVATGRKTATIGVVGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+Q + + L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLEDD-EGYENISVMQGLGQM---LMPDIRRLREEIKPSETDEGDAISSLIVAIQM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------ 164
Y + K K+ + L+T+ + D + IA ++ A + + + V
Sbjct: 119 NVYTKKLKYKRKIYLVTNGKGAIS-------SDGLEDIASKLKADNIELIVLGVDFDDPD 171
Query: 165 ---------RASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
E +R ++E+ D + ++ + L + +RG
Sbjct: 172 YGFKEEDKDEGKAENEALLRGLVEDCDGVYGTLAQ--AIAELDIPRVKVVRG-------- 221
Query: 215 PVTIFRGDLELSEKM------KIKVWVYKKTGEEKFPTLKKYSDKA------PST----- 257
V FRGDL L M +I+V Y +T K P+ + K PST
Sbjct: 222 -VPSFRGDLRLGNPMQYDTALRIQVERYYRTYVAKPPSTSSFVVKTGGDASQPSTQTLEA 280
Query: 258 --DKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D A + V+DP V + ++ KGY YG VPIS ++ K +
Sbjct: 281 SKDADANLTSVRNVRTYHVDDPQVVGGKRELERDELAKGYEYGRTAVPISESDENITKLE 340
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+++L+GF A + R M N+ IA+ N +A +A+S+L A+ E++ AI R V
Sbjct: 341 TMAALELIGFIQADHYDRFMNMSTSNVIIAQKTNEKAALALSSLIHALFELDCYAIARLV 400
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ G+ ++V +L P + PD LPF+EDVR ++FP +
Sbjct: 401 TKDGKSPLIV-LLAPLID-----PDYECLLEVQLPFSEDVRSYKFPPLDR 444
>gi|212542999|ref|XP_002151654.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210066561|gb|EEA20654.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 722
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 203/470 (43%), Gaps = 85/470 (18%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DV SM H+ D+ L R + K+ K +GV+ T+ET
Sbjct: 4 KEATVYIVDVGKSMKQHNNGRDISDLDWAMRYVWDKITTTVATGRKTATIGVVGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+Q + + L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLEDD-EGYENISVMQGLGQM---LMPDIRRLREEIKPSETDEGDAISSLIVAIQM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------ 164
Y + K K+ + L+T+ + D + IA ++ A + + + V
Sbjct: 119 NVYTKKLKYKRKIYLVTNGKGAIS-------SDGLEDIASKLKADNIELIVLGVDFDDPD 171
Query: 165 ---------RASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
E +R ++E+ D + ++ + L + +RG
Sbjct: 172 YGFKEEDKDEGKAENEALLRGLVEDCDGVYGTLAQ--AIAELDIPRVKVVRG-------- 221
Query: 215 PVTIFRGDLELSEKM------KIKVWVYKKTGEEKFPTLKKYSDKA------PST----- 257
V FRGDL L M +I+V Y +T K P+ + K PST
Sbjct: 222 -VPSFRGDLRLGNPMQYDTALRIQVERYYRTYVAKPPSTSSFVVKTGGDASQPSTQTLEA 280
Query: 258 --DKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D A + V+DP V + ++ KGY YG VPIS ++ K +
Sbjct: 281 SKDADANLTSVRNVRTYHVDDPQVVGGKRELERDELAKGYEYGRTAVPISESDENITKLE 340
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+++L+GF A + R M N+ IA+ N +A +A+S+L A+ E++ AI R V
Sbjct: 341 TMAALELIGFIQADHYDRFMNMSTSNVIIAQKTNEKAALALSSLIHALFELDCYAIARLV 400
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ G+ ++V +L P + PD LPF+EDVR ++FP +
Sbjct: 401 TKDGKSPLIV-LLAPLID-----PDYECLLEVQLPFSEDVRSYKFPPLDR 444
>gi|427791695|gb|JAA61299.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 573
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 27/263 (10%)
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T + +LE+ + I + Y K E K K+ K P T V+ D Y ++
Sbjct: 105 TPWNANLEIGPDISIPISSYIKVVEVKPKPWKQCVAKRP------TVPVRCDTVYYRNDE 158
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
V + I YRYG +VP + A E K + +++LGFTD +NI RHYYM
Sbjct: 159 KESEVEKDGTIPAYRYGSTLVPFTDENRAAMEGSKAGSGRGLQVLGFTDEANIKRHYYMG 218
Query: 334 D-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
D + +A G+ A A+SAL +A+++ VAIVR + + + +G L+P + E+
Sbjct: 219 DKTSYVVARKGDESAGAALSALIQALRKSKMVAIVRYSF-SDKSAPRMGFLSPRIKERY- 276
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---- 444
+ F LP+ ED+R F F P+ P + Q D+L+ +DL
Sbjct: 277 --ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNIPTDTQLSLFDDLIAAMDLTAVDID 329
Query: 445 SGKGEILQPELTPNPALEVLNIC 467
E+ + T NP L+ L C
Sbjct: 330 GEPEELFKSSQTSNPYLQRLYQC 352
>gi|170050849|ref|XP_001861497.1| ku P80 DNA helicase [Culex quinquefasciatus]
gi|167872299|gb|EDS35682.1| ku P80 DNA helicase [Culex quinquefasciatus]
Length = 722
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 210/500 (42%), Gaps = 66/500 (13%)
Query: 1 MARTREALLLLLDV-------SPSMHSVLPDVEKLC-SRLIQKKLIYGKNHEVGVILFGT 52
MART+EA +L+LDV S + K C ++++Q+K+ + EVG++L GT
Sbjct: 1 MARTKEACILILDVGKDTLVKSGKNDLTFFERAKGCVTKIVQRKIFSKPHDEVGLVLMGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
++T N+L E GGYEH+ ++ + +++ L+ Q ++ DA++V + L
Sbjct: 61 DDTSNQLNVECGGYEHIAEAFELGPSNWKMLRILESRIQPSKVNANWFDALLVATNFL-- 118
Query: 112 KYGETYKGKKHLCLI-TDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
K G K L +I L + + + G + V + + N+ +A
Sbjct: 119 KVGAQAKKFATLKIILISKLSGVVELEAGELDSFVDKLTNMPCELNIINDNVEHQAGSDE 178
Query: 171 EPHMRVIIENDNL----LNIFSKKSS-------AKTLFVDSTTSLRGARKTRDISPVTIF 219
+ E D L L IFS++ + + L D GA D + + +
Sbjct: 179 Q-------EEDGLGFDALGIFSQRGNRSKEQRKNEKLLADIVFKSNGALCNIDSAELLLV 231
Query: 220 RGD------------LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+ L + K++I Y EEK + S K D A ++K
Sbjct: 232 HFERKVTRSMPWNCMLTIGSKLQISTSTYVLISEEKGLS----SFKTECVDPNAVVKLKT 287
Query: 268 DYEYKSVEDPSKVVPP--EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
D+ +K+ K+ P E IKGY YG VVP S + + E+ + LGFT A N
Sbjct: 288 DH-FKN----DKLYEPDFEDLIKGYMYGSTVVPYDS-QMDFDYKSGEQCLSCLGFTAAGN 341
Query: 326 ILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
IL Y ++ +A+ + + ++AL +AM E++ V I V+R+ + + L
Sbjct: 342 ILEEYLCGTGTHVVVAKKDCAASEAKLTALIKAMLELDVVMIATKVYRRDTKP-KIQALF 400
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA- 443
P + L F E+V +FP +P + Q EA D L+ +DL
Sbjct: 401 PTFRRRF---PCLTMLELVFQEEVALLKFPPL--LSNRHKPTDAQYEAVDKLIDAMDLMD 455
Query: 444 ----PSGKGEILQPELTPNP 459
+G E T NP
Sbjct: 456 GLDDETGSKEAFALHKTLNP 475
>gi|193083083|ref|NP_001122374.1| zinc finger protein ZF(C2H2)-102 [Ciona intestinalis]
gi|93003104|tpd|FAA00135.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 710
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 219 FRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
++ +L L + I Y KT E K T KK K + ++ + Y +D
Sbjct: 257 WKCNLTLGSHLSIPCCAYIKTKEAKLKQTWKKCHAKTHKKE-----DITSNIFYYIDDDE 311
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKD-V 335
V E KGY+YG ++ + + + +KF +K + +LGFTD N+ ++M D
Sbjct: 312 KTEVTKENLGKGYKYGKDIITFGTEDEKQMKFAACDKCLSILGFTDMRNVHVIHHMDDQA 371
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
++ I E G+ A A+SAL AM + N A+ V+R+G +V +L K+ +
Sbjct: 372 HVVIPEAGDEHAGTALSALCTAMVKQNLCAVACHVYRKGSNPKLVALLP-----KVKLGS 426
Query: 396 SFYFNV-LPFAEDVREFQFPS-FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
+ V LPFAEDVR F S FS + QP+E+Q + A++L+ +D S G I +
Sbjct: 427 HYLVMVSLPFAEDVRPLSFESLFSG--KNKQPSEEQLQLAEDLISSMDFTQSEDG-IFKA 483
Query: 454 ELTPNPALE 462
+ NP +
Sbjct: 484 KEKMNPTFQ 492
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE---KLC----SRLIQKKLIYGKNHEVGVILFGTEE 54
A +EALLL LDV M + LC S L+Q+K+ EV ++LFGT E
Sbjct: 3 ASKKEALLLCLDVGTGMKDSTNNQSTSLDLCIHVISTLVQRKIFSQSKDEVSLVLFGTNE 62
Query: 55 TENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK 112
T N L +E Y+++ + + + L+ L + L G DF+DA+ V +D L K+
Sbjct: 63 TSNPLNQEDEESYQNISIAFSLGCPNFELLHYLSNDLKPGVLETDFVDALTVSLDHLHKE 122
Query: 113 YGETYKGKKHLCLITDALCPLKDPDV 138
+ L T+ P D ++
Sbjct: 123 TRYKKISSCRIVLFTNFCHPTSDENL 148
>gi|452988385|gb|EME88140.1| hypothetical protein MYCFIDRAFT_62686 [Pseudocercospora fijiensis
CIRAD86]
Length = 730
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 38/404 (9%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDFLDAI 102
GVI T++T+NEL + Y ++ V + I V ++ L+ T +GD + A+
Sbjct: 53 AGVIGLRTDDTDNELADDDDSYNNISVFKPISQVTMTDIRRLRDQLTVSNTDSGDAVSAL 112
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
+ + M I + + + K+ + LITDA + D+ ++ ++V G+ +
Sbjct: 113 ALAIHM-IAETCKKLQYKRKIVLITDASSSMDTDDLSHFTKKIKEDDMELVILGVDFDD- 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSS------AKTLFVDSTTSLRGARKTRDISPV 216
E + N+ +L F A+ + L+ + T + +
Sbjct: 171 -AEYGFKEEDKGSLKASNEAILEQFCHDCDGAFGTLAQAIDELQIPRLKVTKGTPTRTIL 229
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAP-S 256
T+ D + + + I+V Y K P+ K+ S +AP
Sbjct: 230 TLGNPD-QYDDALTIEVERYIKVMRASPPSASKFVVREGVQHPTQSSATLSNGSAQAPEG 288
Query: 257 TDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
D A Y+ P K V ++ KGY YG V IS ++ F+ +
Sbjct: 289 GDGLAAVRTARSYQVDDENAPGGKKDVEADELSKGYEYGRTAVHISESDQNVTTFETKPG 348
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+++LGF D + R+ M + IA+ + +A++A+S+L A+ E+ AI R V R
Sbjct: 349 LEILGFVDRNQYHRYLDMSRSQMIIAKRTDEKASMALSSLIHALYELESFAIARMVPRAN 408
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
Q ++ VL+PN+ + Y LPF EDVR ++FP +
Sbjct: 409 SQPRLI-VLSPNIESDF---ECLYDTELPFNEDVRNYKFPPLDR 448
>gi|302673880|ref|XP_003026626.1| ku80-like protein [Schizophyllum commune H4-8]
gi|300100309|gb|EFI91723.1| ku80-like protein [Schizophyllum commune H4-8]
Length = 838
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 113/514 (21%), Positives = 206/514 (40%), Gaps = 81/514 (15%)
Query: 31 RLIQKKLIYG--KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH 88
+L +++IY K + GVI+FG +ET N + + GGYE+V ++ + + L
Sbjct: 54 KLKIQEMIYNGRKTDKCGVIIFGCDETNNPVNEREGGYENVSEYIPVEQPNSSTIAKLDE 113
Query: 89 L-PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST 147
L GD +DA++V V M + + + ++TD P++ D +++
Sbjct: 114 LRASEDSTGDPMDALIVAVQMQDEVLNSKKTWTRKITIVTDGESPMELEDWEATVQKINE 173
Query: 148 IARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN--DNLLNIFSKKSSAKTLFVDSTTSLR 205
+ ++ G+ + +PH++ EN ++ S T+
Sbjct: 174 LGVRLAVVGIDFDSEEYGYHQENKPHVKSTNENFWTQFTSLLSHGVVGTCEEALEDTAAP 233
Query: 206 GARKTRDISPVTIFR-GDLELSEK--MKIKVWVYKKTGEEKFPTLKKYS-----DKAPST 257
++T+ + + R GD++ + ++I V K T ++ + KK++ D++ +
Sbjct: 234 DVKETKSVLMSNVLRLGDVDNRPETALEIIVRTAKCTAMQRPKSWKKFAPRVKGDESEAE 293
Query: 258 DK-------------------------FATHEVKVDYEYK-----------SVEDPS--- 278
DK +T +V +D + + +EDP
Sbjct: 294 DKPDEDMEKDDDSIRKAKQAKGEDANAASTQDVNMDADDEDGDDSDAEEVLDLEDPQVRA 353
Query: 279 ---KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
V E ++G++YG P + K +K + F N R M +V
Sbjct: 354 TYYDEVERETLVRGFKYGTSYAPCPEGHFP--KLNTKKGIDFCAFFKRDNFRRELVMGEV 411
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
A+P R +A+S++ RAM + AI R V + G +GVL P K D
Sbjct: 412 QYIWADPAQPRQQIALSSIIRAMFKEKVYAIGRWVGKDGADP-KMGVLAPC---KFPDVD 467
Query: 396 SFYFNVLPFAEDVREFQFPSF-----------SKFPVSWQPNEQQQEAADNLVKMLDLAP 444
+ +PFA+DVR++ FPS ++ P + P E Q A D+ V +DL
Sbjct: 468 CLLWAPMPFADDVRKYTFPSLMNLLNKKGERVTEHP--YIPTEAQCAAMDDFVDSMDLME 525
Query: 445 SG-------KGEILQPELTPNPALEVLNICGYFG 471
+G +G+ + NPAL + G
Sbjct: 526 AGEKDDDGKRGQWFTTIESYNPALHRTKQAMFHG 559
>gi|327356138|gb|EGE84995.1| Ku80 [Ajellomyces dermatitidis ATCC 18188]
Length = 741
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 182/418 (43%), Gaps = 50/418 (11%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T++T N L E Y ++ V Q I + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDTNNPLWEKDEEESYANLSVFQGISQILMSQIRDLRGLIKPSHTTEG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MV 153
D + ++++ +DM+++ Y + K K+ + L+TD + D+ E+ VS I + +V
Sbjct: 109 DAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DIDGIEEIVSKINEENIELV 164
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
G+ + E + +N+N L + ++ S +T+ +
Sbjct: 165 ILGVDFDD--PEYGFKEEDKDPLKAKNENHLKQLVEDCEGIYGTLEHAISEMEIPRTKVV 222
Query: 214 SPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFA 261
+ F+GDL L S + I+V Y +T + P + S+ +T A
Sbjct: 223 RSMPTFKGDLRLGDPEQYSSALSIQVERYYRTYAARPPAASSFVSSAVLSEGQETTQSSA 282
Query: 262 THEVK--------VDYEYKSVEDP-------------SKVVPPEQRIKGYRYGPQVVPIS 300
T K V SV + + V ++ KGY YG V I+
Sbjct: 283 TLAAKESSQEGGAVASALTSVRNARTYQVNDEEAAGGKRDVERDELAKGYEYGRTAVHIT 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + + +++ +GF + R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETDAALEFIGFIPSDKYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
+ A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP K
Sbjct: 403 LECCAVGRLVPKAGKAPLVV-LLAPSIEADY---ECLLEVQLPFAEDVRSYRFPPLDK 456
>gi|70989095|ref|XP_749397.1| Ku family DNA helicase [Aspergillus fumigatus Af293]
gi|74669251|sp|Q4WI96.1|KU80_ASPFU RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|66847028|gb|EAL87359.1| Ku family DNA helicase, putative [Aspergillus fumigatus Af293]
gi|159128812|gb|EDP53926.1| Ku family DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 725
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 176/408 (43%), Gaps = 40/408 (9%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K +GVI T+ET NEL + ++H+ V +I+ ++ L L P T GD
Sbjct: 49 KTATIGVIGLKTDETSNELDDD-PHFKHISVFTEIQQFLMPDIRRLGALVKPSETDKGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AI++ + M++ Y + K K+ + L+T+ + + D+ ++ +V G
Sbjct: 108 ISAIILAIQMIV-TYCKKLKYKRKIVLVTNGQGWMSNEDLDQITKKIKEDNIDLVVLGTD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ G+ + EN+ LL + + ++ S + + + V
Sbjct: 167 FDDPEYGFKEEGKDPRKA--ENEALLRGLVEDCNGAFGTLEQAVSEMDIPRAKRVRTVAT 224
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVD- 268
F+G L+L ++I V Y +T K P+ + SD ++ + ++
Sbjct: 225 FKGFLQLGNPEEYDTALRIPVERYYRTYVAKPPSASSFVLRSDVGAEGEQGESSQLPKSP 284
Query: 269 ---------YEYKSVEDPSKVVPP-------EQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
++ E P + P E+ KGY YG V IS + +
Sbjct: 285 PEGGALTSVRNLRTYEVPDENAPGGKFDVEREELAKGYEYGRTAVHISETDENITTLETY 344
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
+++L+GF R+ +M N+ I + GN +A++A+S+ A+ E+ A+ R V +
Sbjct: 345 AALELVGFIQTDKYDRYMHMSTTNIIIGQRGNDKASLALSSFIHALFELECYAVARLVVK 404
Query: 373 QGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ + V+V +L P++ PD LPFAEDVR ++FP K
Sbjct: 405 ENKPPVMV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDK 446
>gi|171686704|ref|XP_001908293.1| hypothetical protein [Podospora anserina S mat+]
gi|170943313|emb|CAP68966.1| unnamed protein product [Podospora anserina S mat+]
Length = 731
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 191/456 (41%), Gaps = 71/456 (15%)
Query: 41 KNHEVGVILFGTEETENELTKE--VGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAG 96
K +G + F T+ETENEL + + GY+++ VLQ I + ++ L+ P +
Sbjct: 49 KTWTIGFVGFNTDETENELADKDKLEGYDNISVLQPIGPMSMTELRELRSKVQPSRSYGA 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + A VV + ML +KY +K K+ + L+T+ + D ++ D ++ + +
Sbjct: 109 DPVSAAVVALKML-EKYNPKHKIKRRVILVTNGESNIDDEEL----DHIAAVFNE----- 158
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR-------- 208
+++ IV+ + E D N + + + + L + G
Sbjct: 159 FKVELIVIGIDFDDADYG--FKEEDKSTNKKNNEKALQQLVEKCNDGVFGTMQQAVDELS 216
Query: 209 --KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKK--------YSD 252
+ + + P + G L L + + V Y KT P+ +S
Sbjct: 217 IPRIKPVRPFKAYDGPLTLGDPDKYPSAISFHVERYYKTKRASAPSASTVVVSNNNGFSQ 276
Query: 253 KAPSTDKFATHE--------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPI 299
D+ E VK YK V DP + V E+ KGY+YG VVP
Sbjct: 277 SQTYKDEDGDSEMGGAEFSGVKQMRTYK-VNDPDAPGGKRDVDFEELAKGYQYGRTVVPF 335
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
++ K+ +KS ++GF + M + L + + N A + +SA A+
Sbjct: 336 GESDLSITKYSTKKSFTIIGFVPFDSYNPFINMGETGLIVPQKMNEEAELGLSAFIHALY 395
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSF 416
E + A+ R V ++ + +V + +L PN + D F Y LPFAED+R +QFP
Sbjct: 396 EADSYAVARYV-QKDEAAVQILLLKPNTG----LEDEFECLYDVPLPFAEDIRSYQFPPL 450
Query: 417 SK-FPVSWQ--------PNEQQQEAADNLVKMLDLA 443
K VS + PN+ ++A + V +DL+
Sbjct: 451 DKVLTVSGRVLKEHRLLPNDDLKDAVSDFVDAMDLS 486
>gi|407417188|gb|EKF37990.1| KU80 protein, putative [Trypanosoma cruzi marinkellei]
Length = 746
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 212/478 (44%), Gaps = 37/478 (7%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE----LT 60
R A + LD++ S+ E C R + +++ + E+ ++L GT + N
Sbjct: 4 RSASVFALDLNCPPASLALAAE-FCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQHGQN 62
Query: 61 KEVGG--YEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLIKKY 113
E GG ++++ V + ++ L H+ P G DFL+ + V D ++++
Sbjct: 63 DEKGGERFKYISVPCALAAPTVEFLEPLAHITPPPPPCGRHEVDFLETLFV-CDHVLRER 121
Query: 114 GETYKGKKHLCLITDALCPL-KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
++ + LITDA + + D+ T + + +V G+ V + E
Sbjct: 122 TANKCYQRVVYLITDAHTDVARKDDMNTLLESFQQLGVSLVVIGIDFTETSVDTTDDEER 181
Query: 173 HMRVII------ENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRGDLE 224
+ + +N+ +L++ +++ V +L+ + + R I+P + R L
Sbjct: 182 DDKSLTDLPLKAQNERVLHVMCSLLGEESMVVSLEEALQEVQELRRRKITPRALVRVVLS 241
Query: 225 LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPE 284
+ + +++ ++ K EE+ PT+K+ + EV + ++ + + + E
Sbjct: 242 IGD-VRLATQMFTKAQEERLPTMKRMTANG--------EEVYMKIIFQDFSEDATPLRKE 292
Query: 285 QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGN 344
+KGY YG +VP + + A+K K +++ +GF + + + V + + +
Sbjct: 293 DLLKGYHYGRSLVPCAGEDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPLADD 352
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPF 404
A ++ RA+ N+ IVR V R ++G+ P+ +E+ ++ +F+ LP+
Sbjct: 353 MVGAKAFRSIVRAIAAANRAMIVRFV-RTRDADPILGLCVPSTNEQRDV---LFFSPLPY 408
Query: 405 AEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
AEDVR F+F + + ++ +EA L+ + + +L+P T NP ++
Sbjct: 409 AEDVRFFEFSDYKGMWGTDSADDDGEEA--RLLAAIVEDMTVDKLVLRPRETFNPVIQ 464
>gi|307203853|gb|EFN82789.1| ATP-dependent DNA helicase 2 subunit 2 [Harpegnathos saltator]
Length = 832
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 212/483 (43%), Gaps = 52/483 (10%)
Query: 5 REALLLLLDVSPSMH-----SVLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+ L+++ + H S L D EK + +IQKK+ EVG++L G++ +EN+
Sbjct: 13 QESLIFLINIGVTRHGTQSNSSLLDKEKFILKHIIQKKIFLHPKDEVGIVLMGSDSSEND 72
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
V G ++++ L +++ + +L++S+ L + +++ I V+ +
Sbjct: 73 ---SVTGMDNIRELSNMQFGNWNLIESIDKLQNTKQSSSWMEGIYAAVEYI--------- 120
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
KH CL + D +ED VS + L +NI + A G+ + I
Sbjct: 121 --KHECLDNSERKIMLLSDFNEEEDIVSQFEVDDIIKTLNSENIFLIA--IGKRQLNNID 176
Query: 179 ENDN------LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
E+ L + K + + F + + +R +++ + +R D+EL +
Sbjct: 177 EDSYTSSEALLKKVLEKGNGQYSTFEHAMSEVRFYKQSS--TKPKPWRCDMELGDFCIPI 234
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK-GYR 291
+ K E P +KK A +T T + + D +++ ++ + GY
Sbjct: 235 AGISKVMNEPMLPKMKKI---AKTTAADLTEKETLIKNIPQWTDKDRIIHTKEDMSYGYM 291
Query: 292 YGPQVVPIS-SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 350
YG + + +S E + EK K+ GFT N+ Y++ D ++ P + +
Sbjct: 292 YGSKPIFVSDDCEQSMIPKTSEKCYKIHGFTARENVPMEYWLSD-GTYVIIPADESVSAP 350
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 410
+L +AM E N VAI+ V+R+ ++ + L P+V + N P LPF D
Sbjct: 351 FYSLVKAMVEKNVVAIIEKVYRKNTEA-NMAALFPSVDDP-NEPWCLIEIGLPFERD--- 405
Query: 411 FQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDLAPSG------KGEILQPELTPNPAL 461
+ + ++ P+ + Q +++Q A D+L+ L+L G+ P PNP
Sbjct: 406 --YGAIAQHPLKFMMKQLSQEQSNAVDDLLTSLELPEDADEDSTVDGDKYLPGCMPNPGA 463
Query: 462 EVL 464
+ +
Sbjct: 464 QRM 466
>gi|261203883|ref|XP_002629155.1| protein Ku80 [Ajellomyces dermatitidis SLH14081]
gi|239586940|gb|EEQ69583.1| protein Ku80 [Ajellomyces dermatitidis SLH14081]
gi|239608829|gb|EEQ85816.1| protein Ku80 [Ajellomyces dermatitidis ER-3]
Length = 727
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 182/418 (43%), Gaps = 50/418 (11%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T++T N L + E Y ++ V Q I + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDTNNPLWEKDEEESYANLSVFQGISQILMSQIRDLRGLIKPSHTTEG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MV 153
D + ++++ +DM+++ Y + K K+ + L+TD + D+ E VS I + +V
Sbjct: 109 DAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DIDGIEGIVSKINEENIELV 164
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
G+ + E + +N+N L + ++ S +T+ +
Sbjct: 165 ILGVDFDD--PEYGFKEEDKDPLKAKNENHLKQLVEDCEGIYGTLEHAISEMEIPRTKVV 222
Query: 214 SPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFA 261
+ F+GDL L S + I+V Y +T + P + S+ +T A
Sbjct: 223 RSMPTFKGDLRLGDPEQYSSALSIQVERYYRTYAARPPAASSFVSSAVLSEGQETTQSSA 282
Query: 262 THEVK--------VDYEYKSVEDP-------------SKVVPPEQRIKGYRYGPQVVPIS 300
T K V SV + + V ++ KGY YG V I+
Sbjct: 283 TLAAKESSQEGGAVASALTSVRNARTYQVNDEEAAGGKRDVERDELAKGYEYGRTAVHIT 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + + +++ +GF + R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETDAALEFIGFIPSDKYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
+ A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP K
Sbjct: 403 LECCAVGRLVPKAGKAPLVV-LLAPSIEADY---ECLLEVQLPFAEDVRSYRFPPLDK 456
>gi|398399317|ref|XP_003853086.1| hypothetical protein MYCGRDRAFT_40048 [Zymoseptoria tritici IPO323]
gi|339472968|gb|EGP88062.1| hypothetical protein MYCGRDRAFT_40048 [Zymoseptoria tritici IPO323]
Length = 726
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 202/470 (42%), Gaps = 63/470 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDFLDAI 102
GVI T+ET+N L E Y H+K+L I + V+ L++ + T GD A+
Sbjct: 53 AGVIGLRTDETDNPLGDE-DEYHHIKILHPISQIVMSDVRKLRNDLKLSKTGEGDATSAL 111
Query: 103 VVGVDMLIKKYGETYKGKKHL---CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
VV + M+ ET K K+L L+TDA + D+ +++ + + ++V G+
Sbjct: 112 VVAIQMIT----ETCKQLKYLRKIVLVTDARANMITDDLSHITEKIKSDSIELVVLGVDF 167
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF---VDSTTSLRGARKTRDISPV 216
+ E + E++ +L + K LF ++ L+ R T+ + P
Sbjct: 168 DD--AEYGFKEENKDPLKKEHEAVLKTLC--ADGKGLFGTIAEAIDELQTPR-TKSVRPT 222
Query: 217 TIFRGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY------SDKAPST------- 257
++G L L + M I + Y K P+ K+ + ST
Sbjct: 223 PSYKGFLTLGNVELHDDAMIIDIERYPKVMVAAAPSASKFVVRSGGHEATQSTLVGGENG 282
Query: 258 -----DKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D A Y+ P + + E+ KGY YG V IS ++ F+
Sbjct: 283 TQDGGDGLAAIHNARTYQVDDENAPGGKRDLDREELSKGYEYGRTAVHISESDQNVTTFE 342
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
++S+ ++GF D + R+ + + +++ N +A++A+S+ A+ E AI R V
Sbjct: 343 TKQSLDIVGFVDKNQYQRYLDLSKACMIVSQKNNDKASMALSSFIHALHECESYAIARYV 402
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
++ + ++ +L PN + + Y LPFAED+R ++FP + VS +
Sbjct: 403 RKENSEPRML-LLCPNAEPEF---ECLYDVELPFAEDLRSYKFPPLDRVLTVSGKEIKAH 458
Query: 425 ---PNEQQQEAADNLVKMLDLA---PSGKG---EILQPELTPNPALEVLN 465
P++ EA + V +DL+ P +G E + T NP L L+
Sbjct: 459 RNLPSDDLLEAMSDYVDKMDLSKLVPQEEGDPTEYAPMDETYNPHLHRLH 508
>gi|412992252|emb|CCO19965.1| predicted protein [Bathycoccus prasinos]
Length = 745
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 152/365 (41%), Gaps = 69/365 (18%)
Query: 96 GDFLDAIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
GD LDA+ + D+L ++ G+T K + L L P + +G + AR
Sbjct: 132 GDILDALTIACDILAQRMEAMQGKTAKIANEILL----LSPCAEDALGEGSLDENEFARD 187
Query: 152 MVAFGLRMKNIVVRASLS---------GEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
+V ++ K I + + GE + I + N K L +
Sbjct: 188 LVRV-MKEKEITLSVGVGIVDSGGKEEGEEQQKRIGDTSTNTNTNEPKVKVVKLLAEMVK 246
Query: 203 SLRG----------ARKTRDISPVTIFRGDLELSE-----KMKIKVWVYKKTGEEKFPTL 247
G R R +P T FRG+L + + I +W YK+T E T+
Sbjct: 247 QTNGQIEPAMDAIIGRLMRTKTPTTTFRGNLSFGKLGKESYLSIPIWAYKQTMEATAETM 306
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV----VPPEQRIKGYRYGPQVVPIS-SA 302
K Y F ++ D +YK++ SK+ +P EQR++ Y+YG Q +P+ S
Sbjct: 307 KPYG-------AFEGQDLLRDVQYKNI---SKIDGDEIPAEQRVRCYKYGKQSIPMDESV 356
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS-------------RATV 349
E + K +K V+++G D + ++ +F A P + +A
Sbjct: 357 ERQFGAEKMKKGVEIIGTVDLKYVPFWLTTEEPMMFCAWPELTEDEKAGIHTDEYQKACQ 416
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP--DSFYFNVLPFAED 407
A+SA ARA+ + K A+ R +R+G + G LTP +P D F+ LP+AED
Sbjct: 417 ALSAFARALDKKGKCALCRACFREG-SGIHFGALTPKF-----LPEGDFLLFSPLPYAED 470
Query: 408 VREFQ 412
R Q
Sbjct: 471 WRADQ 475
>gi|67536764|ref|XP_662156.1| hypothetical protein AN4552.2 [Aspergillus nidulans FGSC A4]
gi|74595831|sp|Q5B4H8.1|KU80_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|40741705|gb|EAA60895.1| hypothetical protein AN4552.2 [Aspergillus nidulans FGSC A4]
gi|259482618|tpe|CBF77271.1| TPA: ATP-dependent DNA helicase II subunit 2 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku80)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B4H8] [Aspergillus
nidulans FGSC A4]
Length = 725
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 213/506 (42%), Gaps = 90/506 (17%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE---KLCSRLIQKKLIYG-KNHEVGVILFGTEET 55
+EA + ++DV SM L D+E K I + G K +GVI T+ T
Sbjct: 4 KEATVYIVDVGKSMGERRNGRDLTDLEWAMKYVWDCITNTVATGRKTAMLGVIGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+NEL E + H+ VL +IK L+ ++ L P GD + A+++ + M+I
Sbjct: 64 DNELGDE-SHFSHISVLSEIKQF---LMSDIRELGERIKPSSVDKGDAISALILAIQMII 119
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIARQMVA----------F 155
+ + K K+ + LIT+ L + ++ KED + I + +
Sbjct: 120 T-HCKKLKWKRKIVLITNGLGRMNSENLDDIVSKVKEDNIELIILDLTGRRGPDFDDAEY 178
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G++ ++ +PH N+ LL +++ ++ + + + P
Sbjct: 179 GIKEED--------KDPHK---ASNETLLRTITERCDGVFGTLEQAVEETEIPRVKPVRP 227
Query: 216 VTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTD----KFAT 262
V F+G L+L ++I V Y +T K PT ++ SD A + A
Sbjct: 228 VASFKGFLQLGNPEEYDTAVRIPVERYPRTMVAKPPTASQFVLRSDLAAGQEGPVSSTAV 287
Query: 263 HEVKVD-------------YEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAV 307
E + + Y+ P + E+ KGY YG V IS +
Sbjct: 288 PETQPEDGSNLTNVRNLRTYQVSDESAPGGKIDVERDDLAKGYEYGRTAVHISETDENIT 347
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+ + +++L+GF + R+ ++ + ++ IA N +A++A+S+ A+ E+ A+
Sbjct: 348 RLETTAAMELVGFIQSERYDRYMHLSNTHIIIANRANDKASLALSSFIHALFELESYAVA 407
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ 424
R V ++ + +V +L P++ PD LPFAEDVR ++FP VS +
Sbjct: 408 RLVTKENKPPTLV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDHVVTVSGK 461
Query: 425 --------PNEQQQEAADNLVKMLDL 442
PN+ +A D V ++L
Sbjct: 462 VVTQHRNLPNDDLLDAMDKYVDSMEL 487
>gi|225684065|gb|EEH22349.1| ATP-dependent DNA helicase II [Paracoccidioides brasiliensis Pb03]
Length = 722
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 198/455 (43%), Gaps = 56/455 (12%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + + D+E R + K+ K +GVI T+
Sbjct: 4 KEATVYIVDVGKSMANCHHGRSISDLE-WAMRYVWDKITTTVATGRKTANLGVIGLKTDR 62
Query: 55 TENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDFLDAIVVGVDMLI 110
++N L +E Y ++ V QDI ++ ++ L+ + T GD + ++++ +D+++
Sbjct: 63 SDNPLWEKEEEKSYANLTVFQDISQINMPQIRELRKAIKISNTTEGDAISSLILAIDLIV 122
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRAS 167
+ Y + K K+ + L+TD + D E VS I + +V G+ +
Sbjct: 123 R-YCKKLKYKRKIVLVTDGTGAM---DTDGMEGIVSKINEESIELVVLGVDFDD--PEYG 176
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL-- 225
E + EN+ L + ++ S +T+ + + F+GDL L
Sbjct: 177 FKEEDKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEMEIPRTKVVRSMPTFKGDLRLGN 236
Query: 226 ----SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT------------H 263
S + I V Y +T + P + S+ +T AT
Sbjct: 237 PEKYSSALTILVERYYRTYAARPPAASSFVPSSVLSESHQTTRSSATLGGESGTGAASLT 296
Query: 264 EVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
V+ Y K + + ++ KGY YG V I+ ++ K + + +++ +G
Sbjct: 297 SVRNARTYQVDDKEAAGGKRDLERDELAKGYEYGRTAVHITESDENITKLETDAALEFIG 356
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +V
Sbjct: 357 FIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVSKAGKAPLV 416
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFP 414
V +L P++ + LPFAEDVR ++FP
Sbjct: 417 V-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFP 447
>gi|258568132|ref|XP_002584810.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906256|gb|EEP80657.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 713
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 171/404 (42%), Gaps = 48/404 (11%)
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P T GD + +I++ +DM I+++ + K K+ + L+TD + + ++
Sbjct: 82 PSKTTEGDAISSIILAIDM-IERFCKRLKYKRRIILVTDGKGQMDSDGIDGIVTKIKDEG 140
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+++ G+ + + E IEN+ L + + + +
Sbjct: 141 IELIILGVDFDD--PDYGVKEEDKDPQKIENEATLKHLADRCDGMFGTLAQAIDEMSIPR 198
Query: 210 TRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + FRGDL+L + + ++V Y +T + PT + D+
Sbjct: 199 IKIVRSNPSFRGDLKLGDPEHYSIALTVQVERYYRTYVARPPTASAFVLSTALLDRREAA 258
Query: 264 EVKVDYEYKSVEDPS--------------------------KVVPPEQRIKGYRYGPQVV 297
E + +S +P+ + VP + KGY YG V
Sbjct: 259 ESATLRDGESSAEPADPSANLTSVRNARSYQVDDKDAPGGKRDVPRDDLAKGYEYGRTAV 318
Query: 298 PISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA 357
IS ++ K + +++ +GF D N R+ M +VN+ + + N +A++A+S++ A
Sbjct: 319 HISESDENITKLDTDAALEFIGFIDNENYKRYMSMSNVNVIVGQKLNEKASLALSSIVHA 378
Query: 358 MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS 417
+ E+ AI R V ++G+ +VV +L P + + LPFAEDVR ++FP
Sbjct: 379 LFELECYAIARLVTKKGKPPLVV-LLAPLIELGF---ECLLEVQLPFAEDVRSYRFPPLD 434
Query: 418 KF-PVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQ 452
+ VS + P+++ +A D VK +DL+ G L+
Sbjct: 435 RIVTVSGKVVKEHRNLPSDELLDAMDKYVKNMDLSELDNGNPLE 478
>gi|119194859|ref|XP_001248033.1| hypothetical protein CIMG_01804 [Coccidioides immitis RS]
gi|121927188|sp|Q1E6K9.1|KU80_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
Length = 731
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 44/416 (10%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K VGV+ T+ + N L + E Y H+ V Q+I + ++ L+ L P T G
Sbjct: 49 KTATVGVVGLRTDGSSNPLWEKDEEESYAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + +I++ +DM+++ Y + K K+ + L+TD + + + ++ ++V G
Sbjct: 109 DAISSIILAIDMIVR-YCKRLKYKRKIVLVTDGRSTMDSDGIDSIVSKIKEEGIELVILG 167
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + E +N+++L I + + + + + + +
Sbjct: 168 VDFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQAVEEMTTPRIKVVRGI 225
Query: 217 TIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFATHEVKVD 268
FRGDL L S + I+V Y +T + P + S P A V +
Sbjct: 226 PSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSIAPPKGQSTAESSVTLQ 285
Query: 269 YEYKSVEDPS-------------------------KVVPPEQRIKGYRYGPQVVPISSAE 303
+VE + K V + KGY YG V IS ++
Sbjct: 286 NGDSTVETANASNNLSGVRNARSYQVIDENAPGGKKEVERDDLAKGYEYGRTAVHISESD 345
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
K +++ +GF + N R+ M N+ IA+ N +A +A+S++ A+ E+
Sbjct: 346 EVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKAILALSSMIHALFELEY 405
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
AI R V + G+ ++V +L P + + LPFAED R ++FP K
Sbjct: 406 YAIGRLVTKDGKPPLMV-LLAPLIETDF---ECLLEVQLPFAEDTRSYRFPPLDKI 457
>gi|295664851|ref|XP_002792977.1| ATP-dependent DNA helicase II [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278498|gb|EEH34064.1| ATP-dependent DNA helicase II [Paracoccidioides sp. 'lutzii' Pb01]
Length = 719
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 197/460 (42%), Gaps = 61/460 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + D+E R + K+ K +GVI T+
Sbjct: 4 KEATVYIVDVGKSMADCHHGRSISDLE-WAMRYVWDKITTTVATGRKTANLGVIGLKTDR 62
Query: 55 TENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDFLDAIVVGVDMLI 110
++N L +E Y ++ V QDI + ++ L+ + T GD + ++++ +DM++
Sbjct: 63 SDNPLWEKEEEESYANLTVFQDISQIHMPQIRELRKAIKISNTTEGDAISSLILAIDMIV 122
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRAS 167
+ Y + K ++ + L+TD + D E VS I + +V G+ +
Sbjct: 123 R-YCKKLKYRRKIVLVTDGTGAM---DTDGMEGIVSKINEENIELVVLGVDFDD--PEYG 176
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL-- 225
E + EN+ L + ++ S +T+ + + F+GDL L
Sbjct: 177 FKEEDKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEVEIPRTKVVRSMPTFKGDLRLGD 236
Query: 226 ----SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT------------- 262
S + I+V Y +T + P + S+ +T AT
Sbjct: 237 PEQYSSALTIQVERYYRTYAARPPAASSFVPSSVLSEAHQTTQSSATLGGGAWSQESGTG 296
Query: 263 ----HEVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
V+ Y K + + ++ KGY YG V I+ ++ K + + +
Sbjct: 297 PASLTSVRNARTYQVDDKEAAGGKRDLERDELAKGYEYGRTAVHITESDENITKLETDAA 356
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G
Sbjct: 357 LEFIGFIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVSKAG 416
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFP 414
+ +VV +L P++ + LPFAEDVR ++FP
Sbjct: 417 KAPLVV-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFP 452
>gi|398019168|ref|XP_003862748.1| KU80 protein, putative [Leishmania donovani]
gi|322500979|emb|CBZ36056.1| KU80 protein, putative [Leishmania donovani]
Length = 798
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 207/502 (41%), Gaps = 71/502 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK-- 61
++ A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L +
Sbjct: 2 SKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYERS 61
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVD 107
E Y H+ V D+ + + LP G A DF+DA+ V V
Sbjct: 62 EQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRRSIAEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRM 159
+L + T + + + C+ +TDA +V KED +S I +V G
Sbjct: 122 VLQVR---TSQKRYNRCIYFLTDA-----RHEVRHKEDLLSLIGALQRDQVALVVIGFDF 173
Query: 160 K------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD-----STT 202
+ N S + +N+ +L + + + V ++
Sbjct: 174 QALPAPTDSQGKFNEFTAGEASAWAALDRKAQNEIILAALCTELGSPSTLVSPAEALASL 233
Query: 203 SLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
SL R+ R + V + GD+ L+ ++ + T EE+ P+L++ + + D
Sbjct: 234 SLPRCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQE--GVDVV 285
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
T E VE+ + E+R++ + G + S A+ E ++ K ++++ +GF
Sbjct: 286 QTIEY---VAVGGVEEQPCALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGF 342
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 343 VGEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSL 401
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 402 CVCFARTAGSSAEQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGL 457
Query: 441 DLAPSGKGEILQPELTPNPALE 462
+ S +L P T NP L+
Sbjct: 458 SVDDS----VLAPHDTFNPVLQ 475
>gi|146093538|ref|XP_001466880.1| putative KU80 protein [Leishmania infantum JPCM5]
gi|134071244|emb|CAM69929.1| putative KU80 protein [Leishmania infantum JPCM5]
Length = 798
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 207/502 (41%), Gaps = 71/502 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK-- 61
++ A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L +
Sbjct: 2 SKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYERS 61
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVD 107
E Y H+ V D+ + + LP G A DF+DA+ V V
Sbjct: 62 EQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRQSIAEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRM 159
+L + T + + + C+ +TDA +V KED +S I +V G
Sbjct: 122 VLQVR---TSQKRYNRCIYFLTDA-----RHEVRHKEDLLSLIGALQRDQVALVVIGFDF 173
Query: 160 K------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD-----STT 202
+ N S + +N+ +L + + + V ++
Sbjct: 174 QALPAPTDSQGKFNEFTAGEASAWAALDRKAQNEIILAALCAELGSPSTLVSPAEALASL 233
Query: 203 SLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
SL R+ R + V + GD+ L+ ++ + T EE+ P+L++ + + D
Sbjct: 234 SLPRCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQE--GVDVV 285
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
T E VE+ + E+R++ + G + S A+ E ++ K ++++ +GF
Sbjct: 286 QTIEY---VAVGGVEEQPCALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGF 342
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 343 VGEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSL 401
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 402 CVCFARTAGSSAEQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGL 457
Query: 441 DLAPSGKGEILQPELTPNPALE 462
+ S +L P T NP L+
Sbjct: 458 SVDDS----VLAPHDTFNPVLQ 475
>gi|340727268|ref|XP_003401969.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Bombus
terrestris]
Length = 560
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 205/481 (42%), Gaps = 66/481 (13%)
Query: 5 REALLLLLDV---SPSM---HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+LL+++ +P++ HS+L + + R IQK + N +V ++L G+ T+N
Sbjct: 7 KESLVLLINIGVTNPNIENNHSLLEKAKHIAKRKIQKMIFLTPNDKVAIMLMGSGVTKNR 66
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
L EHV+ D ++ LV+ L ++++A+ V L K
Sbjct: 67 L-----DTEHVEEFTDFQIPKWDLVKKCMALEGTNHCSNWIEALEAAV--LFMKENTILP 119
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----RASLSGEPHM 174
+ + L++D +DPD+ +S +A L I++ +++S P +
Sbjct: 120 STRKIILMSDF---NEDPDI------ISQFQADAIADCLSTNKIILVTLSESTISPTPTL 170
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVW 234
+ LL ++K + + D+ S P + LEL +K KI V
Sbjct: 171 SEV-----LLKDVNEKINGHHITFDNAISDMKFYTPIPSKPSPSYYS-LELLDK-KIPVV 223
Query: 235 VYKKTGEEKFPTLKKY--SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 292
Y K + FP KK K S K+ + +V Y +++ KGY+Y
Sbjct: 224 SYGKVRKTNFPPWKKAKGDQKLRSETKYLDRQ-RVSYTADNIQ------------KGYKY 270
Query: 293 GPQVVPI-SSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVA 350
G + + E + E+S ++ GFTD +N+ L ++Y ++ + +
Sbjct: 271 GGDFISVPEDLEMNIRQKDSERSYRIYGFTDRNNVDLEYFYKSSSSVILPNSQTNNVVKP 330
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAED 407
+L +AM E N VAIVR ++++G +V + I+IPD + + L FAED
Sbjct: 331 FYSLVQAMHETNSVAIVRKIFKKGGVPRMVALFPC-----IDIPDEPWCLIEIQLVFAED 385
Query: 408 VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPAL 461
R + S Q N Q EA D+L+ L L + E P PNP +
Sbjct: 386 RRIMETRSMKS--TIKQLNTPQNEAIDSLIDSLMLTDTENDSQIDGCECFLPGCMPNPGV 443
Query: 462 E 462
+
Sbjct: 444 Q 444
>gi|346465795|gb|AEO32742.1| hypothetical protein [Amblyomma maculatum]
Length = 555
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 27/263 (10%)
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T + +LE+ + I + Y K E K K++ K V+ D Y ++
Sbjct: 70 TPWNANLEIGRDISIPISSYIKVVEVKTKPWKQF------VAKRTEAPVRCDTIYYRNDE 123
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
+ + + YRYG +VP + A + K + +++LGFTD SNI RHYYM
Sbjct: 124 KETELERDSTVLAYRYGSTLVPFTDENRAAMDGNKGGSGRGLQVLGFTDESNIKRHYYMG 183
Query: 334 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
D +I A G++ A A+SAL +A+K+ VAIVR + + + +G L+P + E+
Sbjct: 184 DKTSYIVARKGDNCAGAALSALIQALKKSKMVAIVRYAF-SDKSAPRMGFLSPRIKERY- 241
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---S 445
+ F LP+ ED+R F F P+ P + Q D+L+ +DL +
Sbjct: 242 --ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNVPTDMQLSLFDDLIAAMDLTAVDIN 294
Query: 446 GK-GEILQPELTPNPALEVLNIC 467
G+ E+ + T NP L+ C
Sbjct: 295 GEPEELFKSSQTSNPYLQRFYQC 317
>gi|121710658|ref|XP_001272945.1| Ku family DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401095|gb|EAW11519.1| Ku family DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 720
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 48/413 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +E + H+ VL I+ L+ ++ L P T
Sbjct: 49 KTATIGVIGLKTDETSNEL-EEDPHFRHISVLSGIQ---QFLMPDIRKLAGTIKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + AI++ + M++ Y + K K+ + L+T+ + D+ ++ ++V
Sbjct: 105 GDAISAIILAIQMIV-TYCKKLKYKRKIVLVTNGRGWMSSEDLEQITQKIKEDNIELVVL 163
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G + E EN+ LL + ++ S + + +
Sbjct: 164 GTDFDD--PEYGFKEEEKDAQKAENEALLRGLVEDCDGAYGTLEQAVSEMDIPRVKKVRT 221
Query: 216 VTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------- 250
V F+G L+L ++I V Y +T K P+ +
Sbjct: 222 VATFKGYLQLGNPEEYETALRIPVERYYRTYVAKPPSASSFVLRSEIPEQDLEESGTVTG 281
Query: 251 -SDKAPSTDKFATHEVKVDYEYKSVEDP-SKV-VPPEQRIKGYRYGPQVVPISSAEWEAV 307
D P + Y+ P KV V E+ KGY YG V IS+ +
Sbjct: 282 TPDTHPEGGPLTSVRNLRTYQVTDENAPGGKVDVEREELAKGYEYGRTAVHISATDENIT 341
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+ +++L+GF R+ ++ N+ + + GN +A++AVS+ A+ E+ A+
Sbjct: 342 TLETFAALELVGFIQTDKYDRYMHLTTTNIIVGQRGNDKASLAVSSFIHALFELECFAVA 401
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
R V ++ + V+V +L P++ PD LPFAEDVR ++FP +
Sbjct: 402 RLVTKENKAPVMV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDR 448
>gi|330917637|ref|XP_003297893.1| hypothetical protein PTT_08449 [Pyrenophora teres f. teres 0-1]
gi|311329194|gb|EFQ94024.1| hypothetical protein PTT_08449 [Pyrenophora teres f. teres 0-1]
Length = 733
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 189/460 (41%), Gaps = 67/460 (14%)
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLIKKY--- 113
E GYE+++V ++K +L+ +++L P T GD L A+VV + M+
Sbjct: 71 ESEGYENIRVFSELK---QYLLSDIRNLQEQLKPSSTDDGDLLSALVVAIHMIENATKGA 127
Query: 114 -GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVAFGLRMKNIVVRASLSG 170
G K + + ++TD + D+ ++ A ++V GL + V
Sbjct: 128 KGNPLKYDRRIIIVTDGRGQMVTDDLEELAAKIKDPAAPIEIVLLGLDFDDADV--GFKE 185
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E R I+N+ +L F + + + ++ PV +RG L L +
Sbjct: 186 EGKERQKIQNEEILKSFVDDCDGSFGTLATAIDQLHVPRLKETRPVHNYRGSLTLGDPQN 245
Query: 228 ---KMKIKVWVYKKTGEEKFPTLKKY---------------------SDKAPSTDKFATH 263
+ I V Y T K PT + D P+TD A H
Sbjct: 246 YEATITIDVERYPCTMLAKPPTASSFIVRSEVKDESGQSRQSSATMTDDNPPTTDLSAIH 305
Query: 264 EVKVDYEYKSVEDP-SKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 321
+V Y+ + P SK+ V E+ +GY YG V IS ++ VK + ++S +L+GF
Sbjct: 306 NSRV-YQVDDRDQPGSKITVEMEELERGYEYGRTAVHISESDMNVVKLETQQSFELVGFV 364
Query: 322 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
A R+ + N + + N A + +S+ A+ E + AI R V + + V++
Sbjct: 365 KAEEFERYLPLSRANFIVPQKANQPAQLGLSSFIHALYEADCYAIARLVAKDLKPPVLL- 423
Query: 382 VLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSWQ--------PNEQQQE 431
+ +I + +V LPF ED+R ++FP K VS + P +
Sbjct: 424 ----LLVPRIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVSGKTITEHKDLPTDDLLG 479
Query: 432 AADNLVKMLDLAPSGKG------EILQPELTPNPALEVLN 465
A V +DL+ G+ E +PE T +P + +N
Sbjct: 480 AMSEYVDAMDLSTFGRDEDGNEEEYAKPEDTFSPLVHRIN 519
>gi|409050963|gb|EKM60439.1| hypothetical protein PHACADRAFT_82428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 878
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 196/481 (40%), Gaps = 98/481 (20%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLD 100
K + GVI+FG+ +T N + ++ GGYE+V L I + + L GD LD
Sbjct: 66 KTDQCGVIVFGSRKTNNHVNRKQGGYENVDELVPILHPTAKTIAQISELNPAEEIGDPLD 125
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
A+VVG++ + G + + L+TD P++ + + R+
Sbjct: 126 ALVVGIETQDQYLGNKKTWTRKIVLLTDGENPIE--------------IQHLEKIAQRLN 171
Query: 161 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-------------- 206
++ ++ ++ G V +++ + KS K + +L G
Sbjct: 172 DLKIKLTIVG-----VDFDDEEFGYVEEDKSDIKRENEEFYHTLVGTLDNGVVGNCTAAI 226
Query: 207 -------ARKTRDISPVTIFR-GDLE--LSEKMKIKVWVYKKTGEEKFPTLKKYSD---- 252
+++TR ++ R GD+E E ++I V + K T + + KK++
Sbjct: 227 EEISRPESKQTRSQPSASVLRLGDVENHPEEAIEINVKISKCTALVRPKSFKKFARIGDE 286
Query: 253 ----KAPSTDKFATHEV-KVDYEYKSVEDPS----------------------KVVPPEQ 285
+ P D T E ++ E + DPS + V E+
Sbjct: 287 DIEMQNPGDDSEPTVEYGQLTREIRYAFDPSGRRDDEEADRDAEEETEKKDDLQDVEKEE 346
Query: 286 RIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
I+GY+YG VP+ + K + ++ +++ GF R + + +V A +
Sbjct: 347 LIRGYKYGSSFVPVPENNFP--KLETKRGMEICGFFKDEFFRREWSIGEVRYVFAADKSP 404
Query: 346 RATVAVSALARAM------KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 399
VA+S+L AM KE+ AI R + G + +GVL P E N +
Sbjct: 405 LQQVALSSLVEAMFQEINGKEIMYYAITRWITTDGSEP-KMGVLQPVKDESANY--LLWV 461
Query: 400 NV----LPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSG 446
V +PFA+D+R++ FPS + + P E+Q E ++LV L+L +G
Sbjct: 462 QVRASHMPFADDLRKWSFPSLDQLVNGKGQLVMTHPYLPTEEQLETMEDLVDALNLMEAG 521
Query: 447 K 447
+
Sbjct: 522 E 522
>gi|62896765|dbj|BAD96323.1| ATP-dependent DNA helicase II variant [Homo sapiens]
Length = 732
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 16/252 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-A 340
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L + A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 455
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 456 TPNPALEVLNIC 467
PNP + L C
Sbjct: 482 IPNPRFQRLFQC 493
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 83/141 (58%), Gaps = 17/141 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD 128
+ + G+ ++ K+H+ + TD
Sbjct: 118 IQHETIGKKFE-KRHIEVFTD 137
>gi|402889331|ref|XP_003919748.1| PREDICTED: LOW QUALITY PROTEIN: X-ray repair cross-complementing
protein 5 [Papio anubis]
Length = 618
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMK 333
+D V E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M
Sbjct: 185 DDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMG 244
Query: 334 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ L + A + A VA+S+L A+ +++ VAIVR + + + + VGV P++
Sbjct: 245 NQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY- 302
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG---- 448
+ + LPF ED+R++ F S K + P E Q A D L+ + LA +
Sbjct: 303 --ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTL 359
Query: 449 -EILQPELTPNPALEVLNIC 467
++ PNP + L C
Sbjct: 360 EDLFPTTKIPNPRFQRLFQC 379
>gi|380023984|ref|XP_003695789.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
subunit KU80-like, partial [Apis florea]
Length = 676
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 204/472 (43%), Gaps = 94/472 (19%)
Query: 6 EALLLLLDVSPSMHSVLPDVEKLCSRLIQ-KKLIYGK-NHEVGVILFGTEETENELTKEV 63
E+L+LLL+V + P+VE S + K +I+ K EV +IL G+ T+N
Sbjct: 9 ESLVLLLNVGITN----PNVENNSSLFEKAKHIIFLKPKDEVAIILMGSSITKNNF---- 60
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
+++++ D +V + V+ +L ++++A+ V+ +
Sbjct: 61 -NFKYIEEFTDFQVPNWDFVKKCMNLQSTKYCYNWVEALYAAVEFI-------------- 105
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
K++ + R+ I++ + + E ++ E + +
Sbjct: 106 -----------------KQNVIDNSIRK----------IILMSDFNEETNIISKFEANLI 138
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG--DLELSEKMKIKVWVYKKTGE 241
+N +F D+ +SL+ +T V +F DL+L +K KI + Y K
Sbjct: 139 IN------GQHIIFDDAISSLKFYEETS----VKLFPTYYDLQLFDK-KIPIVSYVKIDI 187
Query: 242 EKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
EKFPT KK A K + +D + S ++ IKGY+YG +P+
Sbjct: 188 EKFPTWKK----AKGNQKLQSKTEYLDGQRNSYT-------KDEIIKGYKYGGTFIPVEK 236
Query: 302 AEWEAVKFKP-EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
+ + +K KS K+ GFTD +NI L ++Y ++ + + T +L +AM
Sbjct: 237 ELEDKMSYKSGMKSYKIYGFTDKNNIDLEYFYKSATHVILPSSETNNVTKPFYSLVQAMH 296
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQFPSF 416
E N VAIVR V+R +V + I+IPD + + L FAED R + S
Sbjct: 297 ETNSVAIVRKVFRNNSTPRMVALFPC-----IDIPDEPWCLIEIELAFAEDRRLME--SR 349
Query: 417 SKFPVSWQPNEQQQEAADNLVK--ML-DLAPSGK---GEILQPELTPNPALE 462
+ Q + +Q EA DNL+ ML D+ S + + P PNPA++
Sbjct: 350 PMKSIIKQLSNEQNEAVDNLINSVMLNDIQDSYEVDGNQYFLPGCVPNPAIQ 401
>gi|401425391|ref|XP_003877180.1| putative KU80 protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493425|emb|CBZ28712.1| putative KU80 protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 798
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 207/499 (41%), Gaps = 71/499 (14%)
Query: 7 ALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK--EVG 64
A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L + E
Sbjct: 5 ATVLVLDITLPSAAALVEACDLCDRILTDKMIYAPSDEVAVILAGTEKSRSALYERSEQA 64
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVDMLI 110
Y+H+ V ++ + + LP+G A DF+DA+ V V +L
Sbjct: 65 RYKHITVAAELGPATTLTLAPIAATRAGVAVLPEGATVRRSIAEAYDFIDALQVAVAVLQ 124
Query: 111 KKYGETYKGKKHLC--LITDALCPLKDPDVGTKEDQVSTI-ARQ-----MVAFGLRMKNI 162
+ T + + C L TDA +V KED +S I A Q +V G + +
Sbjct: 125 AR---TSHKQYNRCIYLFTDA-----RHEVRHKEDLLSLIDALQRDQVALVVIGFDFQPL 176
Query: 163 VVRASLSGEPHMRVII------------ENDNLLNIFSKKSSAKTLFVD-----STTSLR 205
A E + + +N+ +L + ++ V + SL
Sbjct: 177 PAAADSQEELNESAVCDASAWAALDRKAQNERILAALCTELGPPSVLVSPAEALESLSLL 236
Query: 206 GARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
R+ R + V + GD+ L+ ++ + T EE+ P+L++ + D T
Sbjct: 237 RCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQDG--VDVVQTI 288
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
E V++ + E+R++ + G +P S + E ++ K ++++ +GF
Sbjct: 289 EY---VALGGVDEQPCALAKEERVEAFFLGVDRIPCSETDRETMRVKGPRALEAIGFVGE 345
Query: 324 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
+ + + M + G+ +AL AM K +VR V R + + V
Sbjct: 346 AEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSLCVC 404
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 443
+ LPFA+DVR FS++P Q + +++ D L+ L +
Sbjct: 405 FARTAASSAEQRHLVLAPLPFADDVRALH---FSEYP-ELQFSAAEEQLMDELIDGLSVD 460
Query: 444 PSGKGEILQPELTPNPALE 462
S +L P+ T NP L+
Sbjct: 461 DS----VLAPDDTFNPVLQ 475
>gi|426201921|gb|EKV51844.1| hypothetical protein AGABI2DRAFT_148177 [Agaricus bisporus var.
bisporus H97]
Length = 844
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E+ ++G++YG VP ++ ++ +K + + GF S R M ++ AEP
Sbjct: 346 EELVRGFKYGSTYVPCPDGQF--LRLPTKKGIDICGFFPVSKFPRELSMGEIQYIWAEPT 403
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+ + VA+S++ +AM+E VAI R V R +GVL P E++ + F + +P
Sbjct: 404 DPQQQVALSSMVQAMREKECVAIARWVSRDDMDP-KMGVLYPEAFERV---ECFLWAQMP 459
Query: 404 FAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 449
FA+D+R++ F S K + P E QQ A D+ V LDL +G+ +
Sbjct: 460 FADDIRKYGFASLDKLISKNGEEIKSHPYIPTESQQNAMDDFVDALDLMNAGEKDEEGNR 519
Query: 450 --ILQPELTPNPAL 461
P + NPAL
Sbjct: 520 TPWFNPAESYNPAL 533
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GV+ FG++ T N + + GGYE+V+ + I +L+ L L
Sbjct: 55 IQEMIFNGRKTDQCGVVTFGSQVTSNIINERNGGYENVEEVFSIAQPTANLLSKLDSLST 114
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLK 134
GD +D ++V + + G+ + + L+T+ CP +
Sbjct: 115 SNVKGDAMDGLIVAIQTQAEYLGKKKSWTRKIVLLTNGECPFE 157
>gi|409083028|gb|EKM83385.1| hypothetical protein AGABI1DRAFT_96384 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 862
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E+ ++G++YG VP ++ ++ +K + + GF S R M ++ AEP
Sbjct: 364 EELVRGFKYGSTYVPCPDGQF--LRLPTKKGIDICGFFPVSKFPRELSMGEIQYIWAEPT 421
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+ + VA+S++ +AM+E VAI R V R +GVL P E++ + F + +P
Sbjct: 422 DPQQQVALSSMVQAMREKECVAIARWVSRDDMDP-KMGVLYPEAFERV---ECFLWAQMP 477
Query: 404 FAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 449
FA+D+R++ F S K + P E QQ A D+ V LDL +G+ +
Sbjct: 478 FADDIRKYGFASLDKLISKNGEEIKSHPYIPTESQQNAMDDFVDALDLMNAGEKDEEGNR 537
Query: 450 --ILQPELTPNPAL 461
P + NPAL
Sbjct: 538 TPWFNPAESYNPAL 551
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GV+ FG++ T N + + GGYE+V+ + I +L+ L L
Sbjct: 55 IQEMIFNGRKTDQCGVVTFGSQVTSNIINERNGGYENVEEVFSIAQPTANLLSKLDSLSP 114
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLK 134
GD +D ++V + + G+ + + L+T+ CP +
Sbjct: 115 SNVKGDAMDGLIVAIQTQAEYLGKKKSWTRKIVLLTNGECPFE 157
>gi|189188602|ref|XP_001930640.1| hypothetical protein PTRG_00307 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972246|gb|EDU39745.1| hypothetical protein PTRG_00307 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 733
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 194/476 (40%), Gaps = 70/476 (14%)
Query: 49 LFGTEETENELT---KEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLD 100
+ G E++L +E GYE+++V ++K +L+ +++L P T GD L
Sbjct: 55 VIGCRTDESDLAGTMEESEGYENIRVFSELK---QYLLGDIRNLQEQLKPSNTNDGDLLS 111
Query: 101 AIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVA 154
A+VV + M+ G K + + ++TD + D+ ++ A ++V
Sbjct: 112 ALVVAIHMVENATKGAKGNPLKYDRRIIIVTDGRGQMVTDDLEELATKIKDPAAPFEIVL 171
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
GL + V G+ + +N+ +L F + + + ++
Sbjct: 172 LGLDFDDAEVDFKEEGKEPQKA--QNEEILRSFVDDCDGNFGTLATAIDQLHVPRLKETR 229
Query: 215 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------ 250
PV +RG L L + + I V Y T K PT +
Sbjct: 230 PVHNYRGSLTLGDPQNYEATITIDVERYPCTMLAKPPTASSFIVQGDVKDESGQSGQSSM 289
Query: 251 ---SDKAPSTDKFATHEVKVDYEYKSVEDPSK--VVPPEQRIKGYRYGPQVVPISSAEWE 305
D P+TD A H ++ Y+ + P V E+ +G+ YG V IS ++
Sbjct: 290 TMTGDNPPTTDLSAVHNSRI-YQVDDKDHPGTKTTVEMEELERGFEYGRTAVHISESDMN 348
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
VK + ++S+ L+GF A R+ + N + + N A + +S+ A+ E + A
Sbjct: 349 VVKLETQQSLDLVGFIKAEEFERYLPLSRANFIVPQKANQPAQLGLSSFIHALYEADCYA 408
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSW 423
I R V + + V++ + +I + +V LPF ED+R ++FP K VS
Sbjct: 409 IARLVAKDLKPPVLL-----LLVPRIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVSG 463
Query: 424 Q--------PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALEVLN 465
+ P + +A V +DL+ G+ E +PE T +P + +N
Sbjct: 464 KTITEHKDLPTDDLLDAMSEYVDAMDLSTFGRDEDGNEEEYAKPEDTFSPLVHRIN 519
>gi|401709869|dbj|BAM36546.1| ku80 protein [Aspergillus aculeatus]
Length = 726
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 193/458 (42%), Gaps = 77/458 (16%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDF 98
K +GVI T++T N+L + + ++ V IK ++ L K +P T GD
Sbjct: 49 KTAGIGVIGLRTDDTSNDLEDD-ADFANISVFSGIKQFLMPDIRELSEKIVPSKTNKGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AIV+ + M+I + + K K+ + L+TD P+ D +S I +++ +
Sbjct: 108 ISAIVLAIQMIII-HCKKLKYKRRIVLVTDGKGPMN-------TDSLSEITKKIKEDNIE 159
Query: 159 MKNIVVRASLSGEPHMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
+ ++ +P V EN+ +L ++ ++ + +
Sbjct: 160 L---IILGPDFDDPDYGVKEEDKDPQKAENEAILRSLAEDCDGAYGTLEQAVAELQIPRV 216
Query: 211 RDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPS----- 256
+ + F+G L+L ++I V Y +T K P+ ++ SD A S
Sbjct: 217 KSVRVTATFKGFLQLGNPEEYDTALRIPVERYFRTHAAKPPSASQFVLRSDLAASQEQPE 276
Query: 257 --------------TDKFATHEVKVDYEYKSVEDPSKVVPPEQR-------IKGYRYGPQ 295
TD + V+ ++ + P + P +R KGY YG
Sbjct: 277 SSATAAAAAQESQPTDGNSLTNVR---NLRAYQVPDEEAPGGKRDVELGDLAKGYEYGRT 333
Query: 296 VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALA 355
V IS + + +++LLGF + R+ ++ N+ IA+ N +A +A+S+
Sbjct: 334 AVHISETDLNITTLETFAALELLGFIQSDRYDRYMHLSTTNIIIAQRANDKAALALSSFI 393
Query: 356 RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQF 413
A+ E+ A+ R V ++ + +VV +L P++ PD LPFAEDVR ++F
Sbjct: 394 HALFELECYAVARLVVKENKPPLVV-LLAPSIE-----PDYECLLEAQLPFAEDVRTYRF 447
Query: 414 PSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDL 442
P K VS + PNE +A + V ++L
Sbjct: 448 PPLDKVLTVSGKVVTQHRNLPNEDLMDAMEKYVLGMEL 485
>gi|62988844|gb|AAY24231.1| unknown [Homo sapiens]
Length = 568
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMK 333
+D V E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M
Sbjct: 135 DDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMG 194
Query: 334 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ L + A + A VA+S+L A+ +++ VAIVR + + + + VGV P++
Sbjct: 195 NQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY- 252
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG---- 448
+ + LPF ED+R++ F S K + P E Q A D L+ + LA +
Sbjct: 253 --ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTL 309
Query: 449 -EILQPELTPNPALEVLNIC 467
++ PNP + L C
Sbjct: 310 EDLFPTTKIPNPRFQRLFQC 329
>gi|326670851|ref|XP_002665537.2| PREDICTED: x-ray repair cross-complementing protein 5-like [Danio
rerio]
Length = 832
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 353 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 408
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 341
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 409 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 468
Query: 342 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
P + A VA+S+L RA+ + AIVR + + + + VG P + +K + +
Sbjct: 469 PRDDEHAAVALSSLIRALDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 524
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG----EILQPELT 456
LP+ ED+R+F FP + P+ Q A D L+ + L + EI +
Sbjct: 525 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESVEIFKVNHI 583
Query: 457 PNPALEVLNIC 467
PNP + L C
Sbjct: 584 PNPQFQRLFQC 594
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 38 IYGKNH-EVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCA 95
++ +N E+G++LFGT+ T+N L + G YE++ V + + + D L++ ++ Q G
Sbjct: 150 VFAENKDEIGLVLFGTDGTKNPLAND-GQYENITVHRHLMIPDFELLEEIERELQPGGQQ 208
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
D+LDA+VV +D+L ET GKK+ L + L D ++ T EDQ+ I + +
Sbjct: 209 ADWLDALVVCMDLL---QNETM-GKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKA 261
Query: 156 GLRMK 160
G+ ++
Sbjct: 262 GITLQ 266
>gi|67969531|dbj|BAE01114.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMK 333
+D V E I+G RYG +VP S + E +K+K E K +LGF +S + R ++M
Sbjct: 185 DDDETEVLKEDIIQGSRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMG 244
Query: 334 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ L + A + A VA+S+L A+++++ VAIVR + + + + VGV P++
Sbjct: 245 NQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY- 302
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG---- 448
+ + LPF ED+R++ F S K + P E Q A D L+ + LA +
Sbjct: 303 --ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTL 359
Query: 449 -EILQPELTPNPALEVLNIC 467
++ PNP + L C
Sbjct: 360 EDLFPTTKIPNPRFQRLFQC 379
>gi|133777834|gb|AAI15209.1| Xrcc5 protein [Danio rerio]
Length = 727
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 15/251 (5%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 248 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 303
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 341
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 304 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 363
Query: 342 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
P + A VA+S+L RA+ + AIVR + + + + VG P + +K + +
Sbjct: 364 PRDDEHAAVALSSLIRALDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 419
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGE---ILQPELT 456
LP+ ED+R+F FP + P+ Q A D L+ M+ + GE I +
Sbjct: 420 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESMDIFKVNHI 478
Query: 457 PNPALEVLNIC 467
PNP + L C
Sbjct: 479 PNPQFQRLFQC 489
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + AL+L +DV SM + P E K+ + +Q+++ E+G++LFGT
Sbjct: 1 MARAAKSALVLCMDVGFSMSNSGPGQEPPFEQAKKVIQKFVQRQVFAENKDEIGLVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L + G YE++ V + + + D L++ ++ Q G D+LDA+VV +D+L
Sbjct: 61 DGTKNPLAND-GQYENITVHRHLMIPDFELLEEIERELQPGGQQADWLDALVVCMDLL-- 117
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
ET GKK+ L + L D ++ T EDQ+ I + + G+ ++
Sbjct: 118 -QNETM-GKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKAGITLQ 161
>gi|346467801|gb|AEO33745.1| hypothetical protein [Amblyomma maculatum]
Length = 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 21/189 (11%)
Query: 291 RYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSR 346
RYG +VP + A + K + +++LGFTD SNI RHYYM D +I A G+
Sbjct: 1 RYGSTLVPFTDENRAAMDGNKGGSGRGLQVLGFTDESNIKRHYYMGDKTSYIVARKGDDC 60
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 406
A A+SAL +A+K+ VAIVR + + + +G L+P + E+ + F LP+ E
Sbjct: 61 AGAALSALIQALKKSKMVAIVRYAF-SDKSAPRMGFLSPRIKERY---ECLVFIQLPYME 116
Query: 407 DVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---SGKG-EILQPELTPN 458
D+R F F P+ P + Q D+L+ +DL +G+ E+ + T N
Sbjct: 117 DLRRFTF-----LPLDTNKDNVPTDMQLSLFDDLIAAMDLTAVDINGEPEELFKSSQTSN 171
Query: 459 PALEVLNIC 467
P L+ C
Sbjct: 172 PYLQRFYQC 180
>gi|336365737|gb|EGN94086.1| hypothetical protein SERLA73DRAFT_114994 [Serpula lacrymans var.
lacrymans S7.3]
Length = 614
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
S+ V EQ I+G++YG P ++ + +K + + GF A N R M +V
Sbjct: 122 SEKVEKEQLIRGFKYGTTYAPCPDGQFP--RLPTQKGMDICGFFQARNFRRELAMGEVQY 179
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
A+P +++ VA+S++ +AM E + +AI R V + G +GVL P+V +KI D
Sbjct: 180 IWADPSSAQQQVALSSIVQAMYEKDVLAIARWVTKDGMDP-KMGVLAPSVFDKI---DCL 235
Query: 398 YFNVLPFAEDVREFQFPSFS-----------KFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ +PFA+DVR++ F S K P + P + Q A +N V +DL +G
Sbjct: 236 LWVQMPFADDVRKYNFASLDYLMSKKGERIMKHP--YIPTDDQLSAMENFVDAMDLMDAG 293
>gi|390603931|gb|EIN13322.1| ku80-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 864
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
V E ++G++YG VP + + + K + + GF A N R M +V A
Sbjct: 352 VEKEDLVRGFKYGATYVPCPEGAFP--RLETRKGIDICGFFKAKNFRRELAMGEVYYVWA 409
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+P +A+S++A+AM+E +AI R V R G +GVL P+V EKI D +
Sbjct: 410 DPAVPAQQIALSSIAQAMEEKGVMAIARWVSRDGMDP-KMGVLAPSVFEKI---DCLLWV 465
Query: 401 VLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+PFA+DVR++ F S ++ P +QQ+A D V +DL +G+
Sbjct: 466 QMPFADDVRKYTFASLDTLINKNGEVVEEHAYLPTPEQQDAMDAFVDAMDLMEAGE 521
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 9 LLLLDVSPSMHSVL-------PDVEKLCSRL-------------IQKKLIYG-KNHEVGV 47
+ L+D+SPSM + P E+ + + IQ+ + +G K + GV
Sbjct: 12 MFLVDISPSMGKLREVELPPGPKGERRTTEVTNLEWGLQFVKLKIQEMIFHGRKTEQCGV 71
Query: 48 ILFGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGV 106
ILFGTEET N + ++ GYEHV I + + L L +GD +DA++VG+
Sbjct: 72 ILFGTEETHNLVHDQMKSGYEHVSEYIPISQPNAGTLAKLSKLQPSEVSGDPIDALIVGL 131
Query: 107 DMLIKKYGETYKGKKHLCLITDALCPLK 134
+ + G+ + + L+TD P++
Sbjct: 132 EAQAQYLGKKKTWTRKIVLLTDGESPME 159
>gi|327308720|ref|XP_003239051.1| hypothetical protein TERG_01036 [Trichophyton rubrum CBS 118892]
gi|326459307|gb|EGD84760.1| hypothetical protein TERG_01036 [Trichophyton rubrum CBS 118892]
Length = 737
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 187/417 (44%), Gaps = 49/417 (11%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDI---KVVDGHLVQSLKHLPQGTCA 95
K +GV+ T+ T +++ + Y+++ + ++I ++ D +QSL P T
Sbjct: 49 KTATIGVVGLRTDGTSSDMWTKSKDNSYKNISIFKEIGQARMPDLRELQSLIK-PSNTDN 107
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + +I++ +DM I KY + + K+ + L+T+ P+ + T +++ ++V
Sbjct: 108 GDAISSIILAIDM-IAKYCKKLRYKRQIVLVTNGKGPMDLDGMDTIAEKIREEGIELVIL 166
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G+ ++ + E +EN++ L ++ S + + +
Sbjct: 167 GVDFDDL--EFGVKEEDKDAAKVENESSLQGLCDVCDGVYGTLEQAISELDTPRVKVVRG 224
Query: 216 VTIFRGDLELSE------KMKIKVWVYKKTGEEKFP------------TLKKYSDKAPST 257
+ F+GD +L + + I+V Y +T + P +++ D + +
Sbjct: 225 IPSFKGDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEIQETGDSSANL 284
Query: 258 DKFATHEVK-VDYEYKSVEDP-------SKVVPPEQRI------KGYRYGPQVVPISSAE 303
T K E SV + S VV ++ + KGY YG V I+ ++
Sbjct: 285 KNARTDTRKSTSNELTSVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITESD 344
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
K + + +++++GF + R+ M + N+ IA+ N++A +A+S++ A+ E+
Sbjct: 345 ENITKLETKAALEIVGFIPIEHYDRYMNMSNSNVIIAQRTNNKAIIALSSIIHALHEVES 404
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
A+ R V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 405 YAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDR 455
>gi|392862723|gb|EAS36611.2| ATP-dependent DNA helicase II subunit 2 [Coccidioides immitis RS]
Length = 742
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 172/421 (40%), Gaps = 49/421 (11%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K VGV+ T+ + N L + E Y H+ V Q+I + ++ L+ L P T G
Sbjct: 55 KTATVGVVGLRTDGSSNPLWEKDEEESYAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQG 114
Query: 97 DF-----LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
D + +I++ +DM+++ Y + K K+ + L+TD + + + ++ +
Sbjct: 115 DANTYEAISSIILAIDMIVR-YCKRLKYKRKIVLVTDGRSTMDSDGIDSIVSKIKEEGIE 173
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+V G+ + E +N+++L I + + + + +
Sbjct: 174 LVILGVDFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQAVEEMTTPRIK 231
Query: 212 DISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFATH 263
+ + FRGDL L S + I+V Y +T + P + S P A
Sbjct: 232 VVRGIPSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSIAPPKGQSTAES 291
Query: 264 EVKVDYEYKSVEDPS-------------------------KVVPPEQRIKGYRYGPQVVP 298
V + +VE + K V + KGY YG V
Sbjct: 292 SVTLQNGDSTVETANASNNLSGVRNARSYQVIDENAPGGKKEVERDDLAKGYEYGRTAVH 351
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
IS ++ K +++ +GF + N R+ M N+ IA+ N +A +A+S++ A+
Sbjct: 352 ISESDEVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKAILALSSMIHAL 411
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
E+ AI R V + G+ ++V +L P + + LPFAED R ++FP K
Sbjct: 412 FELEYYAIGRLVTKDGKPPLMV-LLAPLIETDF---ECLLEVQLPFAEDTRSYRFPPLDK 467
Query: 419 F 419
Sbjct: 468 I 468
>gi|326474806|gb|EGD98815.1| hypothetical protein TESG_06180 [Trichophyton tonsurans CBS 112818]
Length = 767
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 181/416 (43%), Gaps = 47/416 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GV+ T+ T +++ TK Y+++ + ++I ++ L+ L P T G
Sbjct: 49 KTATIGVVGVRTDGTSSDMWTKSKDPSYKNISIFKEIGQALMPDLRELRSLIKPSNTDNG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + +IV+ +DM I KY + K K+ + L+T+ P+ + T +++ ++V G
Sbjct: 109 DAISSIVLAIDM-IAKYCKKLKYKRKIVLVTNGKGPMDLDGMDTISEKIREEGIELVILG 167
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + + E V EN++ L ++ S + + + +
Sbjct: 168 VDFDD--PEFGVKEEDKDAVKAENESSLEKLCDACDGVYGTLEQAISELDTPRVKVVRGI 225
Query: 217 TIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY-------------------S 251
F+GD +L + + I+V Y +T + P +
Sbjct: 226 PSFKGDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQQTEDSSANLK 285
Query: 252 DKAPSTDKFATHEVKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEW 304
+ T K ++E+ +S V D V V + KGY YG V I+ +
Sbjct: 286 NARADTGKSTSNELTSVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITDSME 345
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
K + + +++++GF N R+ M + N+ IA+ N++A +A+S++ A+ E+
Sbjct: 346 NITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKAIIALSSIIHALHEVESY 405
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
A+ R V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 406 AVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDR 455
>gi|35038|emb|CAA40736.1| nuclear factor IV [Homo sapiens]
Length = 628
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMK 333
+D V E I+G+ YG +VP S + E +K+K E K +LGF +S + R ++M
Sbjct: 195 DDDETEVLKEDIIQGFLYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMG 254
Query: 334 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ L + A + A VA+S+L A+ +++ VAIVR + + + + VGV P++
Sbjct: 255 NQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY- 312
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG---- 448
+ + LPF ED+R++ F S K + P E Q A D L+ + LA +
Sbjct: 313 --ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTL 369
Query: 449 -EILQPELTPNPALEVLNIC 467
++ PNP + L C
Sbjct: 370 EDLFPTTKIPNPRFQRLFQC 389
>gi|430811714|emb|CCJ30847.1| unnamed protein product [Pneumocystis jirovecii]
Length = 577
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 212/480 (44%), Gaps = 66/480 (13%)
Query: 33 IQKKLIYGKNHE-VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--L 89
I K+ G+ + VGVI F T ET N++ + Y+++ VL I+ + ++ LK +
Sbjct: 58 ISSKIFSGRKTDYVGVIGFKTNETNNDMEDD-EFYKNISVLCPIQQITIKQIKELKKQLV 116
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P T G ++ LI KY K K+L LIT+ + + D QV ++
Sbjct: 117 PSNTNIG----DGIIIGIDLISKYCGNLKYIKNLILITNGMSYMDFSDSEKIAYQVKHMS 172
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN---LLNIFSKKSSAKTLFVDSTTSLRG 206
+ FG+ + S + + II+ +N LL + + ++ SL
Sbjct: 173 INISIFGIDFDS----YSYGYKEDFKSIIKMNNEKELLKFANICNGTFASMIEVINSLNT 228
Query: 207 ARKTRDISPVTIFRGDLELSEK------MKIKVWVYKKTGEEKFPT------LKK----- 249
+ R + PV++F G L + + ++I + Y +T K P+ LKK
Sbjct: 229 SN-FRKVHPVSLFNGTLTIGDPQNYPDVVEIMIQRYPRTRLAKMPSAHRYNVLKKSPKPT 287
Query: 250 -YSDKAPSTDKFATHEVKVDY--------EYKSVEDPS-KVVPPEQRIKGYRYGPQVVPI 299
Y+++ T + ++ K +Y YK E+ S K + E GY YG ++P
Sbjct: 288 NYTEQLAQTSTNSNNDNKNEYFSEILTTKNYKIEENGSEKEISKEDLELGYVYGKTIIP- 346
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
+S + +K+K + +LGF + R + + N+ + N + +++S+L M
Sbjct: 347 TSIIVDELKYKTNIQLTILGFIKNKSFPRFMAIGESNIIVPAKTNLNSKISLSSLIHGML 406
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK----INIPDSFYFNVLPFAEDVREFQFPS 415
+ N +A+ + V + + ++ ++ P++ + I +P LPFAED R F+FPS
Sbjct: 407 KTNTLALAKIVTKTDKCPEMI-MIAPSIENEFECLIELP-------LPFAEDCRNFKFPS 458
Query: 416 FSKFPVSWQPNEQQQEAADNL----VKMLDLAPS------GKGEILQPELTPNPALEVLN 465
K+ +S E D+L V +DL+ + K +L+ + N A+ LN
Sbjct: 459 MKKYQISNIETNSSIENIDSLMEKYVTKMDLSNTVSDTYIQKTNLLESKYIHNMAIYRLN 518
>gi|259479030|dbj|BAI40068.1| Ku80 [Trichophyton interdigitale]
Length = 728
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 181/416 (43%), Gaps = 47/416 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GV+ T+ T +++ TK Y+++ + ++I ++ L+ L P T G
Sbjct: 49 KTATIGVVGVRTDGTSSDMWTKSKDPSYKNISIFKEIGQALMPDLRELRSLIKPSNTDNG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + +IV+ +DM I KY + K K+ + L+T+ P+ + T +++ ++V G
Sbjct: 109 DAISSIVLAIDM-IAKYCKKLKYKRKIVLVTNGKGPMDLDGMDTISEKIREEGIELVILG 167
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + + E V EN++ L ++ S + + + +
Sbjct: 168 VDFDD--PEFGVKEEDKDAVKAENESSLEKLCDACDGVYGTLEQAISELDTPRVKVVRGI 225
Query: 217 TIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY-------------------S 251
F+GD +L + + I+V Y +T + P +
Sbjct: 226 PSFKGDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQQTEDSSANLK 285
Query: 252 DKAPSTDKFATHEVKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEW 304
+ T K ++E+ +S V D V V + KGY YG V I+ +
Sbjct: 286 NARADTGKSTSNELTSVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITDSME 345
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
K + + +++++GF N R+ M + N+ IA+ N++A +A+S++ A+ E+
Sbjct: 346 NITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKAIIALSSIIHALHEVESY 405
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
A+ R V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 406 AVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDR 455
>gi|62821807|ref|NP_001017360.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Danio rerio]
gi|58221047|gb|AAW68220.1| Ku80 protein [Danio rerio]
Length = 727
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 248 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 303
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 341
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 304 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 363
Query: 342 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
P + A VA+S+L R + + AIVR + + + + VG P + +K + +
Sbjct: 364 PRDDEHAAVALSSLIRTLDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 419
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGE---ILQPELT 456
LP+ ED+R+F FP + P+ Q A D L+ M+ + GE I +
Sbjct: 420 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESVDIFKVNHI 478
Query: 457 PNPALEVLNIC 467
PNP + L C
Sbjct: 479 PNPQFQRLFQC 489
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + AL+L +DV S+ + P E K+ + +Q+++ E+G++LFGT
Sbjct: 1 MARAAKSALVLCMDVGFSISNSGPGQEPPFEQAKKVIQKFVQRQVFAENKDEIGLVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L + G YE++ V + + + D L++ ++ Q G D+LDA+VV +D+L
Sbjct: 61 DGTKNPLAND-GQYENITVHRHLMMPDFELLEEIERELQPGGQQADWLDALVVCMDLL-- 117
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
ET GKK+ L + L D ++ T EDQ+ I + + G+ ++
Sbjct: 118 -QNETM-GKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKAGITLQ 161
>gi|296814992|ref|XP_002847833.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238840858|gb|EEQ30520.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 721
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 214/515 (41%), Gaps = 78/515 (15%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + L D++ + ++ K +GVI T+ T
Sbjct: 4 KEATVYIVDVGKSMGEINNGRELSDLDWAMLYVWDKITTTVATGRKTATIGVIGMRTDGT 63
Query: 56 ENELTKEV--GGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIK 111
+++ + YEH+ + +DI ++ L+ L T GD +D IV
Sbjct: 64 SSDIWSKSKDDAYEHISIFKDIGQALMPDLRELRSLIKASSTDKGDAIDLIV-------- 115
Query: 112 KYGETYKGKKHLCLITDALCPLKDPD-VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
KY + K K+ + L+T+ + DPD + +++ ++V G+ +
Sbjct: 116 KYCKKLKYKRKIVLVTNGKGAM-DPDGMEGIASKINEEGIELVVLGVDFDD--PEYGFKE 172
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK 230
E V EN++ L ++ S + + + + F+GD L + K
Sbjct: 173 EDKDAVKAENESSLQKLCDVCDGIYGTLEQAISELDTPRVKIVRGIPSFKGDFRLGDPEK 232
Query: 231 ------IKVWVYKKTGEEKFP----------------------TLKKYSDKAPSTDKFAT 262
I+V Y +T + P TLK + + +++
Sbjct: 233 YDSALTIQVERYYRTYAARPPAASSFVLSGAPPEGQESGKPSVTLKNVNAEGENSNTIGL 292
Query: 263 HEVKVDYEYKSVEDP----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 318
V+ Y+ +D + V ++ KGY YG V IS ++ K + + +++++
Sbjct: 293 TSVRNARSYQVADDSVVGGKRDVERDELAKGYEYGRTAVHISESDENITKIETKAALEII 352
Query: 319 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
GF N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+
Sbjct: 353 GFIPTQNYDRYMIMSTSNVIIAQRTNNKAIMALSSVIHALFELESYAVGRLVVKDGKGPA 412
Query: 379 VVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKF-PVSWQ--------PNE 427
++ +L P++ PD LPFAED R ++FP + VS + PNE
Sbjct: 413 LI-LLAPSIE-----PDYECLLEVQLPFAEDCRCYRFPPLDRVTTVSGKAVKEHRNLPNE 466
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
A + V ++L G+G EL + ALE
Sbjct: 467 DLVSAMEQYVASMELVEPGEG----GELVESFALE 497
>gi|312371754|gb|EFR19861.1| hypothetical protein AND_21697 [Anopheles darlingi]
Length = 672
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 179/414 (43%), Gaps = 36/414 (8%)
Query: 50 FGTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVD 107
GT+ET N++ E G GYEH+ ++K+ + H + L++ + + ++ DA++V VD
Sbjct: 1 MGTDETSNQVNTEHGSGYEHICEASELKLPNWHTSRVLENKVLRSNSEANWYDALIVAVD 60
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKED-------------QVSTIARQMVA 154
L + G + KHL + + PL P ++ + QV I+ Q+
Sbjct: 61 FL--RAGTANRSFKHLHIFL--ISPLAMPAEVSQSEIRYLLDNLEVMLCQVHIISDQIEH 116
Query: 155 FGLRMKNIVVRASLSG-----EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ + S SG E I+N+NLLN +K + G
Sbjct: 117 SNPITTSTIFTPSSSGTFVDEEVKSEDRIKNENLLNEIMQKEGFTLTNISMAHRCLGFYV 176
Query: 210 TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ + P T + L + K+K + Y E+K K + ST A VK+
Sbjct: 177 PKPVRP-TPWNSTLTIGTKLKFAISAYLLISEQKGLGPFKVTSAGGST---ANSVVKMRT 232
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
++ E P + E I GY YG VVP + K E + LGFT +SNIL
Sbjct: 233 QHFQNEKPIDL-EMEDVIVGYMYGSTVVPYDNTIDMDYK-SGEAGLTCLGFTASSNILDE 290
Query: 330 YYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
Y K L +A+ G + + ++AL +AM +N V + ++R+ + + L P +
Sbjct: 291 YLSGKGTYLVMAKKGCAGSEEKLTALVKAMMALNVVMMAAKIYRKDTKP-RLQTLFPIMH 349
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
E+ P L F +++ +FPSF QP+ +Q A D L+ ++L
Sbjct: 350 EQ-RYP-CLVMLELVFQDEINLVRFPSF--LTSKHQPSPEQYAAIDKLIDSMNL 399
>gi|425768972|gb|EKV07482.1| ATP-dependent DNA helicase II subunit 2 [Penicillium digitatum Pd1]
gi|425770556|gb|EKV09025.1| ATP-dependent DNA helicase II subunit 2 [Penicillium digitatum
PHI26]
Length = 711
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 174/411 (42%), Gaps = 50/411 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K VGV+ T+ T N+L +E + ++ +L + V ++ L+ P T GD
Sbjct: 49 KTATVGVVGLRTDGTINDLEEE--NFSNISILFGLGQVLMPDIRKLRETIKPSKTDRGDA 106
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA---- 154
+ +I++ + M+I+ Y + K K+ + L+T+ + D ++ +++ + ++V
Sbjct: 107 ISSIIIAMQMIIE-YTKKNKYKRKIVLVTNGTGAMSDDNIEGIIEKMKEVNIELVVIGAD 165
Query: 155 -----FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+G++ ++ +R + EN++LL ++ ++ S +
Sbjct: 166 FDDPEYGVKEEDKDIRKA-----------ENESLLRSLTEDCEGIYGTLEQAVSELDTPR 214
Query: 210 TRDISPVTIFRGDL------ELSEKMKIKVWVYKKTGEEKFPTLKKY--------SDKAP 255
+ + F+G+L E + I V Y +T K + Y +AP
Sbjct: 215 IKITKSMPSFKGNLMLGNPEEYDTAITIPVERYFRTYVAKPISASLYVLRSGNEAGSQAP 274
Query: 256 -----STDKFATHEVKVDYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVK 308
D + Y+ P + E+ +GY YG VPI E
Sbjct: 275 VKDTSEGDSLTSVRTSRTYQITDKSAPGGKIDVERDDLARGYEYGRTAVPIEQTEENVAN 334
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
+ + L+GF R+ +M + N+ I + N A++A+S+L A+ E+ A+ R
Sbjct: 335 LQTFAGMGLIGFVQKDQYDRYMHMSNTNIIIPQRANDNASLALSSLIHALYELESYAVAR 394
Query: 369 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
V ++ + ++V +L P+V + LPFAEDVR ++FP K
Sbjct: 395 LVTKESKPPMLV-LLAPSVEAD---HECLIEVQLPFAEDVRSYRFPPLDKI 441
>gi|154278066|ref|XP_001539857.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413442|gb|EDN08825.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 710
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 87/396 (21%)
Query: 66 YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD-FLDAIVV-GVDMLIKKYGETYKGKK 121
Y ++ V QDI + ++ L+ L P T GD + A+ + G+D ++ K E +
Sbjct: 83 YANISVFQDISQILMPQIRELRELIKPSHTLEGDDGMGAMDIDGIDGIVSKINE-----E 137
Query: 122 HLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEND 181
++ L+ + DP+ G KE+ L+ KN E H++ ++E+
Sbjct: 138 NIELVILGV-DFDDPEYGFKEEDKEP---------LKAKN---------ESHLKQLVED- 177
Query: 182 NLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL------SEKMKIKVWV 235
IF ++ S +T+ + + F+GDL L S + I+V
Sbjct: 178 -CEGIFGT--------LEHAISEMEIPRTKVVRSMPTFKGDLRLGDPDQYSSALTIQVER 228
Query: 236 YKKT-------------------GEEKFPTLKKYSDKAPSTDKFA------------THE 264
Y +T G+E + + K PS ++ A T++
Sbjct: 229 YYRTYAARPPPASSFVSSSALSEGQETAQSSATLAAKEPSQERGAGAASLTAVRNARTYQ 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V + K + V ++ KGY YG V I+ ++ K + E +++ +GF +
Sbjct: 289 V----DDKGAAGGKRDVARDELAKGYEYGRTAVHITESDENITKLETEAALEFIGFIPSD 344
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +VV +L
Sbjct: 345 NYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVPKAGKSPLVV-LLA 403
Query: 385 PNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
P++ PD F LPFAED+R ++FP K
Sbjct: 404 PSIE-----PDYECFLEVQLPFAEDMRSYRFPPLDK 434
>gi|403412940|emb|CCL99640.1| predicted protein [Fibroporia radiculosa]
Length = 842
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 27/222 (12%)
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
Y D+ D A+ + D + + + V EQ ++G++YG P ++ +
Sbjct: 310 YIDQEGEMDDNASMDGDQDDDSGTKSKTIEKVEKEQLVRGFKYGSSYAPCPDGQFP--RL 367
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
K +++ GF R Y M +V A+P VA+SA+ +AM E AI R
Sbjct: 368 PTRKGIEICGFFPEKRFRREYAMSEVTYVWADPVQPLQQVALSAVVQAMYEKGAFAIARW 427
Query: 370 VWRQGQQSVVVGVLTPNVSEKINI---------------PDSFYFNVLPFAEDVREFQFP 414
+ R G +GVL P + EK++ P+S +PFA+DVR F FP
Sbjct: 428 IARDGADP-KMGVLVPTMFEKVDCLLWVQVCRLFYAYTTPESLSIAKMPFADDVRNFAFP 486
Query: 415 SFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S + P E Q +A + V +DL +G+
Sbjct: 487 SLDMLINKKGEIIATHPYLPTEDQMDAMERFVDAMDLMEAGE 528
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 9 LLLLDVSPSMHSV----LP-------DVEKLCS--------RLIQKKLIYG--KNHEVGV 47
+ L+DVSPSM LP D K+ + L +++IY K + GV
Sbjct: 1 MFLVDVSPSMGKTRRVRLPGARSGGLDPMKMTNLEWSLQFVMLKIQEMIYNGRKTDQCGV 60
Query: 48 ILFGTEET--------ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFL 99
ILFG+E T EN + K+ GGYE+V I + + L L GD +
Sbjct: 61 ILFGSEGTFYHPANYTENIINKKNGGYENVLEFIPIAQPNAGTLAKLATLQPSETIGDPI 120
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
DA++VG++ + + + L+TD P++ D
Sbjct: 121 DALIVGIETQHQYLSSKKTWTRKVVLLTDGENPIEIED 158
>gi|255942515|ref|XP_002562026.1| Pc18g01820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586759|emb|CAP94406.1| Pc18g01820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 718
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 164/395 (41%), Gaps = 40/395 (10%)
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVG 105
++FGT T N+L +E + ++ +L + V ++ L+ P T GD + +IV+
Sbjct: 70 LMFGTG-TINDLEEE--SFSNISILFGLGQVLMPDIRKLRETIKPSNTNRGDAISSIVIA 126
Query: 106 VDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+ M+I Y + K K+ + L+T+ + D D + I +M + + +V+
Sbjct: 127 MQMIID-YTKKNKYKRKIILVTNGTGVMSD-------DNIEGIIEKMKEVNIEL--VVMY 176
Query: 166 ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL 225
+ E EN+ L ++ ++ S + + + F+G+L L
Sbjct: 177 YGVKEEDKDSRKAENETFLRSLAEDCEGAYGTLEQAVSELDIPRIKVTKSMPSFKGNLTL 236
Query: 226 SE------KMKIKVWVYKKTGEEKFPTLKKY--------SDKAP-----STDKFATHEVK 266
M I V Y +T K + + +AP D A+
Sbjct: 237 GNPEEYDTAMTIPVERYFRTYVAKPISASSFVPRSGTEPGSQAPVKGDAEGDALASVRTS 296
Query: 267 VDYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
Y+ P + E+ KGY YG VPI + + + L+GF
Sbjct: 297 RTYQITDESAPGGKIDVERDDLAKGYEYGRTAVPIEQTDENVANLQTFAGMGLIGFVQKD 356
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
R+ +M + N+ I + N A++A+S+L A+ E+ A+ R V ++ + ++V +L
Sbjct: 357 QYDRYMHMSNTNIIIPQRANDYASLALSSLIHALYELESYAVARLVTKESKPPMLV-LLA 415
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
P++ + LPFAEDVR ++FP K
Sbjct: 416 PSIEADY---ECLIEVQLPFAEDVRSYRFPPLDKI 447
>gi|121934976|sp|Q0U8L4.1|KU80_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
Length = 715
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 199/480 (41%), Gaps = 92/480 (19%)
Query: 41 KNHEVGVILFGTEETE-NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGD 97
K+ + VI T+ET+ + +E GYE+++V ++K +++L+ P T GD
Sbjct: 28 KSALMSVIGCRTDETDLGGVMEEAEGYENLRVFSELKQFLLGDIRTLQDQLRPSKTNDGD 87
Query: 98 FLDAIVVGVDML----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
L A+ + V M+ K G+ K + + ++TD + D+ + +
Sbjct: 88 LLSALALAVQMIDGATQGKGGKPLKYDRRIIIVTDGRGSIDTDDL------------EQI 135
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTL-------FVDSTTSL 204
A +R V L G ++ D+ N F + KSS K FV+ +
Sbjct: 136 AAKIRDPEAPVDLVLLG-------VDFDDPDNGFKEEDKSSQKAKNEVSLKGFVEDCNGV 188
Query: 205 RGAR----------KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLK 248
G + ++ PV F+G L L + + I V Y T K PT
Sbjct: 189 FGTLAEAIDQLQIPRLKETRPVPSFKGQLTLGDPGHYDATLTIDVERYPCTMLAKPPTAS 248
Query: 249 KYS-----------------------DKAPSTDKFATHEVKVDYEYKSVEDPS--KVVPP 283
++ ++ P TD A +V Y+ + E+P K V
Sbjct: 249 SFATRTDFGAGSAAGPSDESSHTMTGEEQPMTDLSAVRNQRV-YQVDNEEEPGMKKNVEM 307
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
++ +GY YG V IS ++ VK + + L+GF A R+ + N + + G
Sbjct: 308 DELERGYEYGRTAVHISESDMNVVKLETTPMLSLIGFVKAEAFERYLPLSRSNFLVPQRG 367
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-L 402
N A +++S+ A+ E + A+ R V ++ + V+V +L P +I + +V L
Sbjct: 368 NQAAQLSLSSFIHALYEADCYAVARLVTKELKPPVIV-LLVP----RIEVEWEALVDVEL 422
Query: 403 PFAEDVREFQFPSFS-KFPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
PF ED+R ++FP K +S + P ++ +A V +DL+ G+ E P
Sbjct: 423 PFEEDMRRYKFPPLDRKLTISGKVITEHKDLPTDELTDAMSKYVDAMDLSTFGRDEDGNP 482
>gi|388856904|emb|CCF49505.1| related to ATP-dependent DNA helicase II, 80 kDa subunit [Ustilago
hordei]
Length = 810
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 281 VPP---EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+PP E + ++ G ++P+ + ++ KS+++L F +AS R Y M +
Sbjct: 364 LPPNSDENFTRAWKLGASLIPVPEESFGSLD--THKSMQILHFFNASAYRREYNMDQIWY 421
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
A+ +A + +S L RAM EM+ +A+VR V + G + +GV+ P V EK N + F
Sbjct: 422 VFADHAQVKAQLQLSTLVRAMAEMDVLAVVRLVRKDGAEP-ELGVIKPKV-EKHN--EYF 477
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKG 448
+++ PF ED+R F FP + + P+EQ QEA D + L+L P
Sbjct: 478 FYSKAPFREDLRRFPFPPLDRVITTDGTEIRIAPTIPDEQDQEAMDAFIDSLEL-PGEWY 536
Query: 449 EILQPELTPNPALEVLNICGYFGFL 473
++LQ + NPA+ L F+
Sbjct: 537 DVLQ---SYNPAIHGLKTAVRHRFI 558
>gi|340959514|gb|EGS20695.1| hypothetical protein CTHT_0025310 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 652
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 274 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
V+DP+ + VP ++ +GY YG VP S +++ +KF +KS +LGF S+
Sbjct: 278 VKDPNAPGGKRDVPADEVERGYLYGETAVPFSESDYTVIKFDAKKSFTILGFIPFSSYQP 337
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
M + +A+ N A +A+S+ + E+ A+ R V + G Q ++ +L PN
Sbjct: 338 FLSMGEAGCVVAQRNNPEAEIALSSFIHTLYELESYAVARFVQKDGAQPQIL-LLKPNP- 395
Query: 389 EKINIPDSF---YFNVLPFAEDVREFQFPSFSK 418
I D F Y LPFAEDVR F FP K
Sbjct: 396 ---GIEDEFECLYDVPLPFAEDVRNFPFPPLDK 425
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VGV+ F T++T+N +E + GYE++ VLQ+I + ++ L+ L P + +GD
Sbjct: 49 KTWTVGVVGFNTDDTDNPQDREGLEGYENISVLQEIGSMTMSSLRRLRSLIKPSHSSSGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD---PDVGTKEDQVS 146
+ A+VV +DM I+K+ + K K+ + L+T+ P+ D DV + +Q S
Sbjct: 109 AISAVVVALDM-IEKFTKKLKYKRKIILVTNGHTPIDDDSTEDVALRLNQSS 159
>gi|145349222|ref|XP_001419039.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579269|gb|ABO97332.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 640
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 56/424 (13%)
Query: 41 KNHEVGVILFGTEETENELT----------KEVGGYEHVKVLQDIKVVDGHLVQS--LKH 88
++H G+ LFG +T N++ E G + L+ + G + L+
Sbjct: 67 RDHCFGLTLFGARDTSNDVAAAALDDDGEGDEYAGIVTARQLRPPESKTGLEYERDILET 126
Query: 89 LPQGTCAGDFLDAIVVGVDMLIKKY---GETYKGKKHLC-------LITDALCPLKDPDV 138
A D +A+ V D LI++Y G KK L LITDA
Sbjct: 127 AAAVDGAADVPEALAVACDSLIRQYSPEGVNAATKKRLAGCVKDIVLITDATGAAT-MQS 185
Query: 139 GTKEDQVSTIARQMVAFGLRMKNIVVRAS----LSGEPHMRVII-----END-----NLL 184
++ V+T+ M A +R+K VV A G+ +RV E D
Sbjct: 186 AVDDEFVATLLDGMKAQNVRLKVGVVDACEMSRARGDAGVRVTASATFREPDFEALRQAC 245
Query: 185 NIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKF 244
++ + + V ++L + + + P + +RG L + V +YK E
Sbjct: 246 DVLAAADAGNDSAVVGASALLLDLQIKRVRPTSGYRGFLSFGFNAGVNVALYKLNTEAVP 305
Query: 245 PTLKKYSDKAPSTDKFATHEVKVDYEYKSVED-PSKVVPPEQRIKGYRYGPQVVPISSAE 303
L +YS++ + +H+ V+ Y++V D + VPPE+ +K +RYG Q +PI +
Sbjct: 306 VKLNRYSEELADRPE-ESHQTLVETTYRNVNDLDGEFVPPERHVKAFRYGKQHIPIDAET 364
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVS----------- 352
+ + EKS+K++G + + ++ + +P S T +S
Sbjct: 365 ESRLSMRFEKSMKVIGSISMDECPLWLSVGEPSVCVPQP--STKTTGLSQERAAADATAL 422
Query: 353 -ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREF 411
ALARA+ + +VR + +G S+ +G LTP ++ + D + LPF ED E+
Sbjct: 423 SALARALDDAKLALLVRGAFTEGTTSIHIGALTPRLT---DAGDFLLYTPLPFKEDYNEY 479
Query: 412 QFPS 415
PS
Sbjct: 480 SLPS 483
>gi|294953906|ref|XP_002787962.1| ku p80 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239903057|gb|EER19758.1| ku p80 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 137
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 229 MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP-SKVVPPEQRI 287
MKI +W Y KT + PTLKK S + VK+D Y +V+DP + +P E+R
Sbjct: 1 MKIPIWCYLKTSKVTLPTLKKESTHTSAA-------VKMDRVYYAVDDPDGEAIPAEERA 53
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSR 346
K Y+YG Q V + ++K+ +K + +LGF + I + + + AEP N
Sbjct: 54 KAYKYGTQFVRFEPYDEASLKYHSDKCLTMLGFARSETIPEELMIGESIECVAAEPNNLD 113
Query: 347 ATVAVSALARAMKEMNKVAIVRCV 370
A A+S+L +AM M V + C
Sbjct: 114 AAKALSSLIKAMDAMGVVVLYLCC 137
>gi|226483439|emb|CAX74020.1| ATP-dependent DNA helicase 2 subunit 2 [Schistosoma japonicum]
Length = 258
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNS- 345
KGYRYG VVP + ++K EK ++GFTDA+N+ + Y D V +F+A+
Sbjct: 23 KGYRYGGTVVPFGQEDLASIKSPSEKCFSVVGFTDANNVPHNVYTGDSVLVFVAKTARQS 82
Query: 346 --------RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDS 396
++ A+ ALA+A+ E+ VA+VR V+ Q +V +GVLTP + +I S
Sbjct: 83 EENLINCPSSSSALIALAQALYEIGGVALVRRVYNQ-TSAVRLGVLTPEIRGNQI----S 137
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + F+ED+R + PS P+S +P+ E
Sbjct: 138 LMYTDIAFSEDIRNPELPS---LPLSCKPSSSTTE 169
>gi|320034646|gb|EFW16589.1| Ku family DNA helicase [Coccidioides posadasii str. Silveira]
Length = 705
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 46/374 (12%)
Query: 83 VQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
++ L+ L P T GD + +I++ +DM+++ Y + K K+ + L+TD + +
Sbjct: 67 IRKLRDLVKPSNTNQGDAISSIILAIDMIVR-YCKRLKYKRKIVLVTDGRSTTDSDGIDS 125
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
++ ++V G+ + E +N+++L I + + +
Sbjct: 126 IVSKIKEEGIELVILGVDFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQ 183
Query: 201 TTSLRGARKTRDISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY--SD 252
+ + + + FRGDL L S + I+V Y +T + P + S
Sbjct: 184 AVEEMTTPRIKVVRGIPSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSI 243
Query: 253 KAPSTDKFATHEVKVDYEYKSVEDPS-------------------------KVVPPEQRI 287
P A V + +VE S K V +
Sbjct: 244 APPKGQSTAESSVTLQNGDSTVETASASNNLSGVRNARSYQVIDENAPGGKKEVERDDLA 303
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
KGY YG V IS ++ K +++ +GF + N R+ M N+ IA+ N +A
Sbjct: 304 KGYEYGRTAVHISESDEVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKA 363
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 405
+A+S++ A+ E+ AI R V + G+ ++V +L P + PD LPFA
Sbjct: 364 ILALSSMIHALFELEYYAIGRLVTKDGKPPLMV-LLAPLIE-----PDFECLLEVQLPFA 417
Query: 406 EDVREFQFPSFSKF 419
ED R ++FP K
Sbjct: 418 EDTRSYRFPPLDKI 431
>gi|315054073|ref|XP_003176411.1| Ku80 [Arthroderma gypseum CBS 118893]
gi|311338257|gb|EFQ97459.1| Ku80 [Arthroderma gypseum CBS 118893]
Length = 725
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 188/418 (44%), Gaps = 50/418 (11%)
Query: 41 KNHEVGVILFGTE-ETENEL-TKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCA 95
K +GV+ T+ +T N++ TK YEH+ + ++I ++ L+ L T
Sbjct: 49 KTATIGVVGLRTDGKTSNDVWTKSKDEAYEHISIFKEIGQALMPDLRELRSLIKTSSTDN 108
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTK-EDQVSTIARQMVA 154
GD + +I + VD+++K Y + K K+ + L+T+ + DPD + +++ ++V
Sbjct: 109 GDAISSIALAVDIIVK-YCKKLKYKRKIVLVTNGKGRM-DPDGMNRIAGKINEEGIELVI 166
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
G+ + + E V EN++ L ++ S + + +
Sbjct: 167 LGVDFDD--PEFGIKEEDKDAVKAENESSLQKLCDTCDGVYGTLEQAISELDTPRVKVVR 224
Query: 215 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------ 250
+ F+G+ +L + + I+V Y +T + P +
Sbjct: 225 GIPSFKGNFKLGDPENYDSALTIQVERYYRTYAARPPPASSFVLSGAPPEVQETGDSSAT 284
Query: 251 -SDKAPSTDKFATHEVKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSA 302
++ + +K ++E+ V +S V D V V + KGY YG V I+ +
Sbjct: 285 LNNASTEAEKSTSNELTVVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITES 344
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
+ K + + +++++GF N R+ M + N+ +A+ N++A +A+S++ RA+ E+
Sbjct: 345 DENITKLETKAALEIIGFIPTQNYDRYMNMSNSNVIVAQRTNNKAIMALSSIIRALFELE 404
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD-SFYFNV-LPFAEDVREFQFPSFSK 418
A+ R V + G+ ++ +L P++ PD V LPFAEDVR ++FP +
Sbjct: 405 SYAVGRLVSKDGKSPTLI-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDR 456
>gi|328769384|gb|EGF79428.1| hypothetical protein BATDEDRAFT_89512 [Batrachochytrium
dendrobatidis JAM81]
Length = 840
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 180/448 (40%), Gaps = 48/448 (10%)
Query: 27 KLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEVGGYEHVKVLQDI--KVVDGHLV 83
+L +R +Q +I G+ +V +I+ G+E +N L + Y+HV + ++ V
Sbjct: 39 QLVARQLQDLIINGRKGDVVSLIIVGSESADNPLAVD-DQYQHVSIYNYCHEQLFCMASV 97
Query: 84 QSLKHLPQGTCAG----DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG 139
K + G G D +D I+VG+ +L + + + + + + + A L+
Sbjct: 98 DMFKFVSNGCVVGGDYGDVMDGIIVGMHVL-ELHCKQLQFDRRMFVCAHAGGSLESDGYE 156
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM-RVIIENDNLLNIFSKKSSAKTLFV 198
+ + + G + V S+S PH+ + I S S +
Sbjct: 157 QVLHTATVMNLDFIMVGFNFPDPV---SISN-PHLANATFWRNFTCQIPSCTRSQPNRVL 212
Query: 199 D---STTSLRGARKTRDISPVTIFRGDLELS--EKMKIKVWVYKKTGEEKFPTLKKYSDK 253
D ++ L R +S ++ GDL E + I V Y KT K PT KK+S
Sbjct: 213 DPEEASVVLDQLRHHLTLS-APVYCGDLTFGTKEDLVIPVTCYLKTSGVKIPTSKKFSML 271
Query: 254 APSTDKFATHEVKVDY-------EYKSVE--------------DPSKVVPPEQRIKGYRY 292
A D + +DY YK V+ + + PE I+ YRY
Sbjct: 272 AEEIDSELRAQYGMDYGAVKLTKTYKYVDGNDKDSDDASESDSVDASHIHPENVIRAYRY 331
Query: 293 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVS 352
G V+P S + EA + +KS+K++GF + I RHYY+ + + +
Sbjct: 332 GKAVIPFSIQDEEAAQLLTKKSIKIIGFIKSDAIPRHYYISGTMAIVPNKDVRGTDIQFT 391
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
AL +AM + N VAI R R GVL +S K F +P+A+D R
Sbjct: 392 ALLQAMTKANIVAIAR-YCRINNAKPKFGVL---ISTKKGYG---LFIQIPYADDFRFVV 444
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKML 440
P ++ P Q + ++ ML
Sbjct: 445 APPIDDLTLATLPKTIQSISTESKTDML 472
>gi|226293459|gb|EEH48879.1| ATP-dependent DNA helicase II [Paracoccidioides brasiliensis Pb18]
Length = 633
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 152/354 (42%), Gaps = 41/354 (11%)
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
T GD + ++++ +DM+++ Y + K K+ + L+TD + D E VS I +
Sbjct: 15 NTTEGDAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DTDGMEGIVSKINEE 70
Query: 152 ---MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR 208
+V G+ + E + EN+ L + ++ S
Sbjct: 71 SIELVVLGVDFDD--PEYGFKEENKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEMEIP 128
Query: 209 KTRDISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPS 256
+T+ + + F+GDL L S + I V Y +T + P + S+ +
Sbjct: 129 RTKVVRSMPTFKGDLRLGDPEKYSSALTILVERYYRTYAARPPAASSFVPSSVLSESHQA 188
Query: 257 TDKFAT------------HEVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
T AT V+ Y K + + ++ KGY YG V I+
Sbjct: 189 TRSSATLGGESGTGAASLTSVRNARTYQVDDKEAAGRKRDLERDELAKGYEYGRTAVHIT 248
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + + +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 249 ESDENITKLETDAALEFIGFIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 308
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFP 414
+ A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP
Sbjct: 309 LECYAVARLVSKAGKAPLVV-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFP 358
>gi|396493633|ref|XP_003844102.1| similar to ATP-dependent DNA helicase II [Leptosphaeria maculans
JN3]
gi|312220682|emb|CBY00623.1| similar to ATP-dependent DNA helicase II [Leptosphaeria maculans
JN3]
Length = 733
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 190/455 (41%), Gaps = 61/455 (13%)
Query: 45 VGVILFGTEETE-NELTKEVGGYEHVKVLQDIK---VVDGHLVQSLKHLPQGTCAGDFLD 100
+ VI + T++T+ + K+ GYEH+ V ++K +VD +Q K P T GD L
Sbjct: 53 MSVIGYRTDDTDLRGIVKDTQGYEHITVFSNVKQYLLVDIRNLQE-KLKPSQTDDGDLLS 111
Query: 101 AIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGT----KEDQVSTIARQM 152
A+ + V M+ G K + + ++TD D+ +D+ + I ++
Sbjct: 112 ALALAVQMIDSTTRGAKGNPLKYDRKIIVVTDGRGEWDTDDLEQITMKIKDEAAPI--EV 169
Query: 153 VAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRD 212
G+ + + E N+ +L F + + + ++
Sbjct: 170 TVLGVDFDD--AESGFKEEDKEPEKARNEEILRSFVEACDGNFGTLAVAIDQMHTPRLKE 227
Query: 213 ISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYS-----DKA-PSTDKF 260
P ++G L L + + I V Y T K PT ++ DKA PS +
Sbjct: 228 TRPTPSYKGPLTLGDTANYDATITIDVERYPCTMLAKPPTASSFAVRTEDDKAGPSAESP 287
Query: 261 ATHEVKVDY--------EYKSVEDPSKVVPPEQRI--------KGYRYGPQVVPISSAEW 304
AT V D+ Y+ + K P+ ++ +GY YG V IS ++
Sbjct: 288 ATM-VGEDHAMTDLSAVRYQRLYQIDKPGEPDSKMTVELDELERGYEYGRTAVHISESDM 346
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
VK + E S++L+GF A R+ + + + + N +A +A+S+ A+ E
Sbjct: 347 NCVKMETEPSLQLVGFVKAEEFERYLPLSRSSFLVPQKANPQAQLALSSFIHALYEAECY 406
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVS 422
AI R V ++ + V+V +L P +I + +V LPF ED+R ++FP K VS
Sbjct: 407 AIARLVTKEMKPPVMV-LLMP----RIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVS 461
Query: 423 WQ--------PNEQQQEAADNLVKMLDLAPSGKGE 449
+ P E A + V +DL+ G+ E
Sbjct: 462 GKVITEHKDLPTEDLVNAMSDYVDAMDLSTFGRDE 496
>gi|402218793|gb|EJT98868.1| SPOC domain-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 799
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
V E+ +K Y+YG VP E+E K + K ++++GF S R + +V+
Sbjct: 345 VEKEELVKAYKYGATWVPCEEGEFE--KLQTTKGMEVIGFVPESKWHREQALGEVSYVYP 402
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ-SVVVGVLTPNVSEKINIPDSFYF 399
+++A + SA+ + M E + VR VWR G V V P S + D F
Sbjct: 403 SDTSAKAQIQFSAIVQVMAEKGVMMTVRYVWRDGADPKVGVCKAQPLGSVEWGGVDCLLF 462
Query: 400 NVLPFAEDVREFQFPSFSKF----------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE 449
+PFA+DVR+++F S + S P ++QQ A D+ V +DL + + E
Sbjct: 463 VQMPFADDVRKYKFNSLTDLFDKKTGERIKEHSTLPTQEQQSAMDDFVDAMDLMDATQDE 522
Query: 450 ------ILQPELTPNPALEVLNICGYFG 471
P L+ NPAL + + G
Sbjct: 523 EGNTAPWFDPALSFNPALHRIKQALFHG 550
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCS------------------RLIQKKLIYG-KNHEVGVIL 49
+ ++DVSPSM + E S R IQ+ + K E GVIL
Sbjct: 13 IFVIDVSPSMGEPMFPAEDSGSPEEGYGLTKLEWALEYVIRKIQEFIFTERKTEECGVIL 72
Query: 50 FGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFLDAIVVGVDM 108
FGT+ T N++ E GYE++ L + ++ L+ + P+GT A + LDA++V +
Sbjct: 73 FGTDTTNNKVNDEHDGYENIVELVPLSAPTTKIIDMLRTVKPEGTIA-EPLDALIVAIQT 131
Query: 109 LIKKYGETYKGKKHLCLIT--DALCPLKDPD 137
G K+ + L+T + C D D
Sbjct: 132 QSLHLGNKKAWKRRITLVTYGETECNFDDWD 162
>gi|226483441|emb|CAX74021.1| ATP-dependent DNA helicase 2 subunit 2 [Schistosoma japonicum]
Length = 548
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNS- 345
KGYRYG VVP + ++K EK ++GFTDA+N+ + Y D V +F+A+
Sbjct: 23 KGYRYGGTVVPFGQEDLASIKSPSEKCFSVVGFTDANNVPHNVYTGDSVLVFVAKTARQS 82
Query: 346 --------RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDS 396
++ A+ ALA+A+ E+ VA+VR V+ Q +V +GVLTP + +I S
Sbjct: 83 EENLINCPSSSSALIALAQALYEIGGVALVRRVYNQ-TSAVRLGVLTPEIRGNQI----S 137
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + F+ED+R + PS P+S +P+ E
Sbjct: 138 LMYTDIAFSEDIRNPELPS---LPLSCKPSSSTTE 169
>gi|19113583|ref|NP_596791.1| Ku domain protein Pku80 [Schizosaccharomyces pombe 972h-]
gi|74624850|sp|Q9HGM8.1|KU80_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=Pombe Ku80
gi|9929270|emb|CAC05245.1| Ku domain protein Pku80 [Schizosaccharomyces pombe]
Length = 695
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 193/459 (42%), Gaps = 39/459 (8%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-- 89
L K L K VG++ + ++T+N+L E Y ++ VL I+ +QS+
Sbjct: 40 LSHKFLANRKTDVVGIVGYKCDDTKNDLA-EQEAYWNISVLYPIQTALFSKLQSVSQTLK 98
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P T GD + AIVV D L+ ++ + K KK + ++T A + D +Q+
Sbjct: 99 PSNTMQGDLISAIVVSFD-LMARHCKKNKWKKKMIVLTAARGIIDFSDYIGIAEQLLQHD 157
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ +G+ + S + + EN+ + F + + + G
Sbjct: 158 VFLGVYGVDFDQEDINYSEPLKESQKK--ENEVRIQEFVESCHGQYCTFQQIYNNIGKPW 215
Query: 210 TRDISPVTIFRGDLELSEK------MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
R + PV IFRG + + + I+V Y +T K PT + + S + +
Sbjct: 216 VRKVRPVAIFRGTFSIGNRDSKDTSISIQVERYPRTRLTKPPTSSAFYENDMSKNYECLN 275
Query: 264 EVKVDYEYKSVE-------------DP----SKVVPPEQRIKGYRYGPQVVPISSAEWEA 306
+ E KS+E DP S V E GY YG +VPIS ++ +
Sbjct: 276 IENSNVENKSMESDAVSTVRSYMVRDPKTNDSFEVKREDLESGYSYGRTIVPISRSDEDV 335
Query: 307 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
+ ++LGF S++ +Y + D N+ + + + + + SA ++++ ++ A+
Sbjct: 336 LALDTIPGYEILGFIPKSSLPIYYTISDTNIIVPK-DDFESKLNFSAFVQSLEREHRYAL 394
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSKFPVSWQP 425
R V + V++ VL P V K + + ++ LPFAEDVR + F F K + +
Sbjct: 395 ARFVSKDKGVPVLL-VLMPYVEFKRH----YLVDIQLPFAEDVRPYSFSEFEKLS-NEED 448
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVL 464
Q A N + +DL S G P P ++
Sbjct: 449 MRQIDFAVSNYIDNMDLDSSDCG--FNPPFEPENTFSMI 485
>gi|453088076|gb|EMF16117.1| Ku family DNA helicase [Mycosphaerella populorum SO2202]
Length = 728
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 191/450 (42%), Gaps = 70/450 (15%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK---HLPQGTCAGDFLDA 101
GVI T+E+ NE + Y +V VL DI V V+ L+ H+ + T GD +DA
Sbjct: 54 AGVIGLRTDESNNEWADD-DNYRNVSVLHDISQVLMPDVRRLRDKLHVSR-TTKGDAIDA 111
Query: 102 IVVGVDMLIKKYGETYKGKKH---LCLITDALCPLKDPDVGTKE-DQVSTIARQMVAFGL 157
+V+ V +K ET K ++ + LITD G E D + I +++V G+
Sbjct: 112 LVIAV----QKLHETCKKLQYVRTIILITDGR--------GRMEIDMLPEIKKKIVEDGI 159
Query: 158 RMKNIVVRASLSGEPHMR------VIIENDNLLNIFSKKSSAK-TLFVDSTTSLRGARKT 210
+ + V H + + EN+ LL + + + + L+ R
Sbjct: 160 HLIVLGVDFDDPDYHHFKEEDKDPIKAENEVLLRTLCEDCNGTFGTMLQAHDELQMPR-I 218
Query: 211 RDISPVTIFRGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFAT 262
+ + P +RG L L + I V Y K + P+ + S+ F
Sbjct: 219 KSVRPTAGYRGFLTLGNPELYDDAFTISVERYPKIMKATVPSSSAFVVRHGGASSQNFTQ 278
Query: 263 HE----------------VKVDYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSA 302
+ V++ Y+ ++ + K V ++ +GY YG V IS +
Sbjct: 279 PQNDDSNNNNNNTNSLSAVRMARTYQVHDENAPGGKKDVGRDELAQGYEYGRTAVHISES 338
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
+ F+ + ++GF + ++ + + +++ + +A++A+S+L RA+ E++
Sbjct: 339 DRNVTAFETLPGLDVVGFVHKDHYRQYLDLSRAYMTVSKKADEKASMALSSLIRALYELD 398
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 421
AI R V ++ ++ +L PN+ + Y LPFAEDVR ++FP + V
Sbjct: 399 SYAIARFVAKENSNPKLL-LLVPNIEPDF---ECLYDVELPFAEDVRNYKFPPLDRVLTV 454
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLA 443
S + PN+ A + V +DL+
Sbjct: 455 SGKSLKVHRHLPNDDLMSAMSDYVDAMDLS 484
>gi|403177245|ref|XP_003335793.2| hypothetical protein PGTG_17028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172789|gb|EFP91374.2| hypothetical protein PGTG_17028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 568
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 270 EYKSVEDP----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
E S E+P ++ V E K Y+YG +V + + A++ + +++ GF + N
Sbjct: 362 EDSSDEEPGLLEAREVDRENLAKAYKYGASLVVVDKEDEAAIRQSFSECLEIRGFVNLKN 421
Query: 326 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
I RH+ + +V + + ++ SA+ RAM + N+ A+ R V R + +L P
Sbjct: 422 IPRHHLLNNVYYLYPIATDYGSQISFSAIVRAMNDANRAALARYVGRSVVAEPKLVILIP 481
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV--------SWQPNEQQQEAADNLV 437
V I F F +PF +D+R++ FP P+ + P ++ Q+A D LV
Sbjct: 482 VVEPTIRY---FLFIQVPFVDDLRQYAFPPLPTGPILGNRTVRTQYVPTDEMQDAMDELV 538
Query: 438 KMLDLA 443
+DL+
Sbjct: 539 DKMDLS 544
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 42/160 (26%)
Query: 1 MARTREALLLLLDVSPSMH-------------SVLPDVE---KLCSRLIQKKLIYG-KNH 43
MA RE + +DVSPSM + + ++E ++ + L+ G K
Sbjct: 1 MAGGRELTIYAIDVSPSMSEKRTADDPSTGATTSVTNLEYGLEVVKHQVANMLLAGLKTV 60
Query: 44 EVGVILFGTEETENELTKEVGGYEHVK-----------VLQDIKVVDGHLVQSLKHLPQG 92
GV+LFGTE T+N L GYE++ L I ++ HL S K
Sbjct: 61 HCGVVLFGTERTDNSLAS--SGYEYIWEYVRPGQPSAITLLHINKIEQHLTTSEKPF--- 115
Query: 93 TCAGDFLDAIVVGVDMLIKKYGETYKGKK---HLCLITDA 129
GD L AI+ + GET KK + L+TDA
Sbjct: 116 --KGDLLSAII----LCNHHMGETLAAKKWTRKIVLVTDA 149
>gi|285475086|dbj|BAI68043.1| piggyBac-like protein Tpb1p [Tetrahymena thermophila]
Length = 1363
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 35/318 (11%)
Query: 151 QMVAFGLRMKNIVVRASLSGEPHMRVIIEN------DN-----LLNIFSKKSSAKTLFVD 199
Q+ F + +K ++ +L GE M+ + E+ DN L+ + ++ S F+
Sbjct: 142 QLQEFIMHLKRDQIKITLIGEEIMKNLREDSVTDWKDNQNIEFLIKLKNQISKKNIQFLT 201
Query: 200 STTSLRGARKTRDISPVTI-----FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
S +L+ + + I P I + G ++ ++ V V+ KT E+ LK YS+
Sbjct: 202 SEEALQISLR---IKPKQILQRPKYNGTFQIRNELTADVVVFTKTLEKHLLNLKTYSNIT 258
Query: 255 ---PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
PST + V+ +Y V+D P + K Y+YG Q+V +S +
Sbjct: 259 EWNPSTQR---QMVEQQIQYYQVDDILLENPVQDISKYYKYGNQLVKMSELFLNQINLFT 315
Query: 312 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +KL+G S+I R +M ++ A+ + R+ +++L +A E + + R V
Sbjct: 316 LKEIKLIGSVQKSSIPRQSFMSGCDILFAKQDSKRSRYIIASLIKACFEEQRYLVARFVL 375
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
RQ +V VL P++ + + FY LP E +R++ F S + +QQ+
Sbjct: 376 RQNSIPKLV-VLIPHLKKNC---EYFYIIELPTVESIRDYSFNSLIR------STPEQQK 425
Query: 432 AADNLVKMLDLAPSGKGE 449
L+ LDL K +
Sbjct: 426 LMSQLIDELDLDQDEKNQ 443
>gi|449669936|ref|XP_002157022.2| PREDICTED: uncharacterized protein LOC100208923 [Hydra
magnipapillata]
Length = 1177
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 394
++F+A+P + A VA SAL RA+ E N VAIVR V R +G LTPN+
Sbjct: 68 CHIFVAQPDDEYAAVAFSALCRALDEKNMVAIVRYVSRSNNDP-KIGFLTPNIKSSY--- 123
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
+S F LPF ED+R +QF SF +P+E+ A D+ + + L + E+ P+
Sbjct: 124 ESLLFIALPFKEDIRHYQFASFKNVK---EPSEEAIAAMDSFIDSMTLIKND-TELFNPK 179
Query: 455 LTPNPALE 462
NP ++
Sbjct: 180 DLVNPYMQ 187
>gi|158298889|ref|XP_319031.4| AGAP009910-PA [Anopheles gambiae str. PEST]
gi|157014103|gb|EAA14064.4| AGAP009910-PA [Anopheles gambiae str. PEST]
Length = 681
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 198/445 (44%), Gaps = 48/445 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIV 103
VG++LFGT+ET N+L + GGYE++ ++K + ++ L++ + Q + DA++
Sbjct: 3 VGIVLFGTDETNNQLNVDSGGYENITEAFELKPPNWQTLRILQNQVVQTESEAGWFDALI 62
Query: 104 VGVDMLIK-KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
V + L G+ + G + ++ L D D G E I+ L + ++
Sbjct: 63 VATNFLRNGALGKKFTG--YSIILLSPLFVAGDIDQGQLESVADGISNM-----LGVLHV 115
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT-------LFVDST----TSLRGARK-- 209
+ L + I + + K+ A+T +D+T ++ A +
Sbjct: 116 ITNYVLHPAASVASIFTTTGTFDEQASKTEARTENERYVRQILDATDGTLANINWAERML 175
Query: 210 ----TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
+ + P T + L + K+K+ + Y E+K L + K S D A+ V
Sbjct: 176 TFFDAKAVRP-TPWNSTLTIGTKVKLSISAYYIVCEQK--GLGSF--KVDSVDDAASR-V 229
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDAS 324
++ +Y + P+++ + I GY YG VVP + +++K + + LGFT +S
Sbjct: 230 EMRTQYFLNDKPAEI-SMQDIIMGYMYGSTVVPYDNTI--DIEYKSGDCRLACLGFTASS 286
Query: 325 NILR-HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
NIL H K ++ +A+ G + + AL +AM E+N V I V+R+ + + L
Sbjct: 287 NILEEHLSGKGSHVVVAKKGCGASNQKLCALVKAMHELNVVMIATKVYRKDTKP-RLNAL 345
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KML 440
P + K P ++ F +++ +FPS K + +P +Q +A D L+ ++
Sbjct: 346 IP--TYKHGNPCLVMLELI-FKDELCSLKFPSLLKSSKN-KPTNEQYDAVDKLIDSMNLM 401
Query: 441 DLAPSGKGEILQP---ELTPNPALE 462
D GE + T NP L+
Sbjct: 402 DAVDDSNGECREAFALNSTFNPTLQ 426
>gi|118375761|ref|XP_001021064.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila]
gi|89302831|gb|EAS00819.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila SB210]
Length = 2933
Score = 74.7 bits (182), Expect = 8e-11, Method: Composition-based stats.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 29/302 (9%)
Query: 164 VRASLSGEPHMRVIIE--------NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
++ +L GE M+ + E N N+ + K+ + TS + + I P
Sbjct: 1860 IKITLIGEEIMKNLREDSVTDWKDNQNIEFLIKLKNQISKKNIQFLTSEEALQISLRIKP 1919
Query: 216 VTI-----FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA---PSTDKFATHEVKV 267
I + G ++ ++ V V+ KT E+ LK YS+ PST + V+
Sbjct: 1920 KQILQRPKYNGTFQIRNELTADVVVFTKTLEKHLLNLKTYSNITEWNPSTQR---QMVEQ 1976
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
+Y V+D P + K Y+YG Q+V +S + K +KL+G S+I
Sbjct: 1977 QIQYYQVDDILLENPVQDISKYYKYGNQLVKMSELFLNQINLFTLKEIKLIGSVQKSSIP 2036
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
R +M ++ A+ + R+ +++L +A E + + R V RQ +V VL P++
Sbjct: 2037 RQSFMSGCDILFAKQDSKRSRYIIASLIKACFEEQRYLVARFVLRQNSIPKLV-VLIPHL 2095
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + FY LP E +R++ F S + +QQ+ L+ LDL K
Sbjct: 2096 KKNC---EYFYIIELPTVESIRDYSFNSLIR------STPEQQKLMSQLIDELDLDQDEK 2146
Query: 448 GE 449
+
Sbjct: 2147 NQ 2148
>gi|221507343|gb|EEE32947.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 938
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 175/451 (38%), Gaps = 105/451 (23%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
LVQ L+ + D +D +VV VDM+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKL-SQNNVSFLVFSDC---QSSPAT 216
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASL--------SGEPHMRVIIENDNLLNIFSKKSS 192
ED + + ++ G+R+ I+V S+ G+P R+ N + ++ +
Sbjct: 217 PED-IPAVRDRLEVLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALA 272
Query: 193 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 245 PTLKK-------------YSDKAPST----DKFAT--------------HEVKVDYEYKS 273
PTL+K +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYFR 392
Query: 274 VEDPS----KVVPPEQRIK---------------------------------GYRYGPQV 296
DP K+ P+ R + YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHV 542
>gi|156371372|ref|XP_001628738.1| predicted protein [Nematostella vectensis]
gi|156215722|gb|EDO36675.1| predicted protein [Nematostella vectensis]
Length = 230
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 26/177 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
++A+ ++LD+ PSM S P E K + +IQ+K+ E +ILFGTEET N
Sbjct: 4 KDAVAIILDIGPSMSSAPPGHETSLELSIKAINMIIQRKMFANAKDEFSLILFGTEETSN 63
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF---------------LDAI 102
L +E GGYE++ V++D+ D ++ L+ + G G F +DA+
Sbjct: 64 RLNEECGGYENISVVKDLAPPD---LEMLRFIHDGITPGLFTDKNNNTAMHSSKPVIDAV 120
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
VV +D+L +K K K + L TD P + + D + + Q V G R+
Sbjct: 121 VVAMDLLREKT-RGKKCDKKIYLFTDLGSPFGNDQLDKIVDGLMELDAQFVLVGPRL 176
>gi|343426087|emb|CBQ69619.1| related to ATP-dependent DNA helicase II, 80 kDa subunit
[Sporisorium reilianum SRZ2]
Length = 822
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 281 VPPEQR---IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+PP+ + ++ G ++P+ + + + KS+++L F +AS R Y M +
Sbjct: 364 LPPDSDASFTRAWKLGASLIPVPDESFGEMDTR--KSMEILHFFNASAYRREYNMDQIWY 421
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
A+ +A + +S L RAM EM+ +A+VR V + G + +GVL P V E + F
Sbjct: 422 VFADHAQIKAQLQISTLVRAMVEMDVLAVVRLVRKDGAEP-ELGVLKPKVEEHN---EYF 477
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKG 448
+++ PF ED+R F FP + + P++ Q+A D V L+L P G
Sbjct: 478 FYSKAPFREDLRRFPFPPLDRVITTDGTELRQGPTIPDDADQQAMDAFVDSLEL-PDGWF 536
Query: 449 EILQPELTPNPALEVLNIC 467
++L + NPA+ L
Sbjct: 537 DVLD---SYNPAIHGLKTA 552
>gi|221487550|gb|EEE25782.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 938
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 174/451 (38%), Gaps = 105/451 (23%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
LVQ L+ + D +D +VV VDM+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKL-SQNNVSFLVFSDC---QSSPAT 216
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASL--------SGEPHMRVIIENDNLLNIFSKKSS 192
ED + + ++ G+R+ I+V S+ G+P R+ N + ++
Sbjct: 217 PED-IPAVRDRLEMLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALP 272
Query: 193 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 245 PTLKK-------------YSDKAPST----DKFAT--------------HEVKVDYEYKS 273
PTL+K +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYYR 392
Query: 274 VEDPS----KVVPPEQRIK---------------------------------GYRYGPQV 296
DP K+ P+ R + YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHV 542
>gi|299755185|ref|XP_001828487.2| Ku80 [Coprinopsis cinerea okayama7#130]
gi|298411107|gb|EAU93320.2| Ku80 [Coprinopsis cinerea okayama7#130]
Length = 855
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
E K+ E+ + + E+ +KG++YG P ++ K + K + ++GF + N R
Sbjct: 330 EKKNKEENWERIEKEELVKGFKYGTTYAPCPDGQFP--KLQTVKGIDIMGFFPSKNFRRE 387
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
M +V +I N+ +A+S+L +AM K AI R V R + GVL P V +
Sbjct: 388 LSMGEVT-YIWPGTNAPDQLALSSLIQAMYNSQKYAIARWVLRDNSDPKM-GVLAPCVWD 445
Query: 390 KINIPDSFYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKML 440
I D + +PFA+DVR++ F S + P ++QQEA DN V +
Sbjct: 446 NI---DCLLWVRMPFADDVRKYVFGSLDTLVNKKGEVVEEHPYLPTQEQQEAMDNWVDKM 502
Query: 441 DLAPSG 446
+L +G
Sbjct: 503 ELGDAG 508
>gi|170084899|ref|XP_001873673.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651225|gb|EDR15465.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 628
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E+ ++G++YG VP ++ K K + + GF N R M ++ A+P
Sbjct: 150 EELVRGFKYGTTYVPCPEGQFP--KLPTRKGIDICGFFYTKNFRRELSMGEIQYVWADPS 207
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+ + VA+S++ +AM E +AI R V + G +GVL P +K+ D ++ +P
Sbjct: 208 SPQQQVAISSIVQAMYEKEVMAIARWVTKDGMDP-KMGVLWPTRFDKV---DCLLWSHMP 263
Query: 404 FAEDVREFQFPSFSKFPVS----------WQPNEQQQEAADNLVKMLDLAPSGK 447
FA+DVR++ F S + VS + P + Q A D V +DL +G+
Sbjct: 264 FADDVRKYTFASLDQL-VSKKGEAIKEHPYIPTKAQITAMDEFVDAMDLMDAGE 316
>gi|451847146|gb|EMD60454.1| hypothetical protein COCSADRAFT_193151 [Cochliobolus sativus
ND90Pr]
Length = 733
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 196/482 (40%), Gaps = 76/482 (15%)
Query: 45 VGVILFGTEETE-NELTKEVGGYEHVKVLQDIK-VVDGHLVQSLKHLPQG-TCAGDFLDA 101
+ VI T+ET+ + +E GY+H++V IK + G + +HL T GD L A
Sbjct: 53 MSVIGCRTDETDLASIIEEDEGYDHIRVFSKIKQYLLGDIRNLQEHLKSSRTNNGDILSA 112
Query: 102 IVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ V + M+ G K + + ++TD + D+ E S I F +
Sbjct: 113 LAVAIHMIDTATRGAKGNPLKYDRRIIIVTDGRGEMVTDDL---EQLTSKIKDPEAPFEI 169
Query: 158 RMKNIVVRASLSG------EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+ I G +P +N+ +L F + + + +
Sbjct: 170 TLLGIDFDDPDVGFKEENKDPQK---AQNEGILKSFIADCDGNFGTLATAIDQLHMPRLK 226
Query: 212 DISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKY--------------- 250
+ PV +RG L L + K I + Y T K PT +
Sbjct: 227 ETRPVHSYRGSLTLGDPTKYDATITIDIERYPCTMIAKPPTASSFVIRTDATGSSGPVIE 286
Query: 251 -------SDKAPSTDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISS 301
D+A +TD A +V Y+ +S +P K V ++ +GY YG V IS
Sbjct: 287 SSAAGTDQDQA-ATDLSAVRNQRV-YQVESQTEPGIKKNVEMDELERGYEYGSTAVHISE 344
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
++ VK + +++++L+GF A + R+ + N + + N A + +S+ A+ E
Sbjct: 345 SDMNVVKLETQQAMELVGFVRAEDFERYLPLSRTNFIVPQKANQPAQLGLSSFIHALYEA 404
Query: 362 NKVAIVRCVWRQGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS- 417
+ A+ R V + + V++ + + P +++ LPF ED+R ++FP
Sbjct: 405 DCYAVARLVAKDLKPPVLLLLVPRIEPEWEALVDVE-------LPFEEDMRRYKFPPLDR 457
Query: 418 KFPVSWQ--------PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALEV 463
K VS + P + +A + V +DL+ G+ E +PE T +P +
Sbjct: 458 KLTVSGKVITEHKDLPTKNLVDAVSDYVDAMDLSTFGRDEDGNEDEYAKPEDTFSPLVHR 517
Query: 464 LN 465
+N
Sbjct: 518 IN 519
>gi|307187343|gb|EFN72471.1| ATP-dependent DNA helicase 2 subunit 2 [Camponotus floridanus]
Length = 576
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 202/466 (43%), Gaps = 64/466 (13%)
Query: 3 RTREALLLLLDVSPSMH-----SVLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ +E+++ L+ + H S+L D K + +IQ+K+ E+GVIL G +
Sbjct: 5 KLKESIIFLVKIGIVRHGTQSNSMLLDKAKFILKHIIQRKIFLCPKDEIGVILMGCD--- 61
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N + + E+++ L ++V + +L++S++ L +++AI ++ + +
Sbjct: 62 NSKSNSITELENIQELCRVQVGNWNLIESIEKLQTTNQNYSWMEAIYAAIEYI--NHECV 119
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRV 176
K ++ + L++D +ED VS +A +LS E +
Sbjct: 120 DKSERKIILLSD---------FNEEEDVVSQFQMDDIA-----------KTLSSEEISLI 159
Query: 177 IIENDNLLNIF-SKKSSAKTLFVDSTTSLRGARKT--RDISPVTIFR----------GDL 223
I +L NI +++++ L + + G T R +S V ++ +
Sbjct: 160 AIGERDLDNIDKDSQTASEGLLMSVLREIGGQYLTFERAMSDVCFYKRPSTKPMPWYCQM 219
Query: 224 ELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPP 283
EL + K E K P + ST EV + + ++ +
Sbjct: 220 ELGNFHIPIAAISKIPTEVKLPKMILMG--KTSTPDMPEQEVPIKNIAQWTDNNRTIHTE 277
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
E I+GY YG + +P+S + + K EK K+ GFT NI Y++ D ++ P
Sbjct: 278 EDIIRGYVYGGKSIPVSDETEKTMTPKTNEKCYKIHGFTAKENIPMEYWLSD-GTYVIVP 336
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV- 401
N + +L +AM + N +AIV V+R ++ +V + I++P+ + +
Sbjct: 337 ANESVSAPFYSLVQAMVDKNVIAIVEKVYRANTEANMVALFP-----SIDVPNEPWCLIE 391
Query: 402 --LPFAEDVREFQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDL 442
LPF D + + ++ P+ + Q +++Q +A D+L+ L+L
Sbjct: 392 IGLPFERD-----YGAIAQRPLKFVMKQLSKEQNDAIDDLLTSLEL 432
>gi|254585085|ref|XP_002498110.1| ZYRO0G02486p [Zygosaccharomyces rouxii]
gi|238941004|emb|CAR29177.1| ZYRO0G02486p [Zygosaccharomyces rouxii]
Length = 615
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 29/251 (11%)
Query: 213 ISPVTIFRGDLELSEKMKIKVWVYKKTGE-------EKFPTLKKYSD-------KAPSTD 258
+ PV +F G+L L + + + E E +P K S K
Sbjct: 213 VRPVMVFSGELRLGADVAVHTDQDSQDDEHSLTIKVEGYPATKAVSSISRKMVVKREIHG 272
Query: 259 KFATHEVKVDYEYKSVEDPSKVVP----PEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEK 313
K VK EY+ D K +P P+ K YRYG V + SS E K+
Sbjct: 273 KDVYKPVKSVVEYEIQGDDEKSLPIQVSPKSIAKAYRYGADYVVLPSSLEDPPRKYASRP 332
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVW 371
+ +LGF D + RH+ + A+ G + VA+SAL A+KE N++AIVR V
Sbjct: 333 GMDILGFIDQKALPRHFLHSESRFITADTRYGGVQDVVALSALVDALKESNQLAIVRFVA 392
Query: 372 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 429
+ V VGVL P I++ D + + LPFAED R FP + +Q
Sbjct: 393 KP-TSDVQVGVLCP-----IHVEDNHTLVYCRLPFAEDQRVSDFPRLVNRTTTSGKKIEQ 446
Query: 430 QEAADNLVKML 440
++ N+ M+
Sbjct: 447 DKSQGNIDSMM 457
>gi|303310907|ref|XP_003065465.1| Ku70/Ku80 beta-barrel domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105127|gb|EER23320.1| Ku70/Ku80 beta-barrel domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 739
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 154/391 (39%), Gaps = 55/391 (14%)
Query: 66 YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
Y H+ V Q+I + ++ L+ L P T GD DM+++ Y + K K+ +
Sbjct: 93 YAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQGD---------DMIVR-YCKRLKYKRKI 142
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
L+TD + + ++ ++V G+ + E +N+++
Sbjct: 143 VLVTDGRSTTDSDGIDSIVSKIKEEGIELVILGVDFDD--PDYGFKEEDKDPFKTKNESV 200
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL------SEKMKIKVWVYK 237
L I + + + + + + + FRGDL L S + I+V Y
Sbjct: 201 LKILADDADGAYGTLAQAVEEMTTPRIKVVRGIPSFRGDLRLGDPSQYSTGLTIQVERYY 260
Query: 238 KTGEEKFPTLKKY--SDKAPSTDKFATHEVKVDYEYKSVEDPS----------------- 278
+T + P + S P A V + +VE S
Sbjct: 261 RTYVARPPAASAFALSIAPPKGQSTAESSVTLQNGDSTVETASASNNLSGVRNARSYQVI 320
Query: 279 --------KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY 330
K V + KGY YG V IS ++ K +++ +GF + N R+
Sbjct: 321 DENAPGGKKEVERDDLAKGYEYGRTAVHISESDEVITKLDTTAALEFIGFIQSENYERYM 380
Query: 331 YMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 390
M N+ IA+ N +A +A+S++ A+ E+ AI R V + G+ ++V +L P +
Sbjct: 381 NMSTSNVIIAQKINDKAILALSSMIHALFELEYYAIGRLVTKDGKPPLMV-LLAPLIE-- 437
Query: 391 INIPD--SFYFNVLPFAEDVREFQFPSFSKF 419
PD LPFAED R ++FP K
Sbjct: 438 ---PDFECLLEVQLPFAEDTRSYRFPPLDKI 465
>gi|403347774|gb|EJY73321.1| hypothetical protein OXYTRI_05549 [Oxytricha trifallax]
Length = 679
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 33/234 (14%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 276
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNCKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 277 PSKV-VPPEQRIKGYRYGPQVVP----ISSAEWEAVKFKP---EKSVKLLGFTDASNILR 328
K+ VP EQ IK + YG Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITVPSEQDIKAFNYGKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + + N R A + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRGSFNER---AFAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
E+ N + LP E+ R+++F S +P S +AA L+K LD
Sbjct: 300 EEANT----VYGQLPTNEEKRDYKFLSL--YPAS----RNHMQAAMELIKALDF 343
>gi|403351317|gb|EJY75148.1| hypothetical protein OXYTRI_03469 [Oxytricha trifallax]
Length = 873
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 33/234 (14%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 276
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNCKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 277 PSKV-VPPEQRIKGYRYGPQVVP----ISSAEWEAVKFKP---EKSVKLLGFTDASNILR 328
K+ VP EQ IK + YG Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITVPSEQDIKAFNYGKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + + N R A + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRGSFNER---AFAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
E+ N + LP E+ R+++F S +P S +AA L+K LD
Sbjct: 300 EEANT----VYGQLPTNEEKRDYKFLSL--YPAS----RNHMQAAMELIKALDF 343
>gi|393247894|gb|EJD55401.1| SPOC domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 826
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 200/514 (38%), Gaps = 103/514 (20%)
Query: 33 IQKKLIYG-KNHEVGVILFGTE--------ETENELTKEVGGYEHVKVLQDIKVVDGHLV 83
IQ+ + +G K + GVILFGTE ET N + + GGY+HV +I + +
Sbjct: 56 IQEMIFHGRKTDQCGVILFGTEGAPTADCCETGNIVNEAHGGYDHVIEFIEIAQPNATTL 115
Query: 84 QSLKHLPQGTC------AGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
L + + D +DAI+V ++ + + + +ITDA P++
Sbjct: 116 AKLSEISSTVIEDDDAFSADPIDAIIVAIETQEQALSTKRSWTRKMIVITDAEAPME--- 172
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
E+ +T+++ + +G+R ++V E V EN + + ++K +
Sbjct: 173 ---LEEWEATVSK-INDYGVR--TLIVGVDFDDE-EFGVQEENKSTIKRENEKFWKEQFV 225
Query: 198 VDSTTSLRGA-------------RKTRDISPVTIFR-GDLE--LSEKMKIKVWVYKKTGE 241
T + ++T+ + T+ R GD E E ++I V K T
Sbjct: 226 PKLETGIVATCAEVLQDCDKPDIKETKSAALSTVLRIGDPEGHPDEAVEITVRTAKATAV 285
Query: 242 EKFPTLKKYSDKAP----------------------------------STDKFATHEVKV 267
+ PT+KK++ + P ST+ +A
Sbjct: 286 TRPPTMKKFAKREPKDEDKDEDKDKMDVDEVKKEEEEPENDIYVELKASTEYYAKKVKDE 345
Query: 268 DYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
+ E K VED + V ++ + +YG V +E + + K + L G
Sbjct: 346 EGEKKDVEDAADGELDQVDKQETVNVLKYGASWVDEPEGGFEGLATR--KGIDLYGVFPE 403
Query: 324 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
R + M +V + + R A+S+L R+M E R + R S + VL
Sbjct: 404 FKFRRDWAMGEVTYVWPDARSGRHQAALSSLVRSMSEKQVYGYCRLISRD-NSSPKMCVL 462
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF-----------PVSWQPNEQQQEA 432
P E +N D F +PF+ DVR F F S ++ P+ P ++Q A
Sbjct: 463 RP---ENVNGVDCFLMVQMPFSNDVRSFGFESLTRLYSKKGTQITQHPL--LPTDEQLTA 517
Query: 433 ADNLVKMLDLAPSGKGE-----ILQPELTPNPAL 461
+ V +DL + K E P + NPA+
Sbjct: 518 MEAFVDSMDLMRAEKTEEGRVPWFDPVQSYNPAV 551
>gi|392572067|gb|EIW65239.1| SPOC domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 676
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 261 ATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
A +V+ D E ++ D V V E+ ++GY+YG P + +P + + G
Sbjct: 162 AHGDVEDDAETQAERDKRLVKVEKEELVRGYKYGASFAPAPEEGFPKFPVRP--GMDICG 219
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F R M +V A+P + VA+S++ AM E + VAI R V + +
Sbjct: 220 FFPQERFRREMAMGEVYYVWADPASPMQQVALSSIVNAMNETHVVAITRWV-KTEKGEPK 278
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQ 430
+GVL P V E+I D F + +PFA+D+R F F S + P +Q
Sbjct: 279 MGVLWPTVFEEI---DCFLWVQMPFADDIRNFTFASLENLITKKGEVVKEHPYLPTNEQM 335
Query: 431 EAADNLVKMLDLAPSGK 447
+A + V +DL +G+
Sbjct: 336 DAMEKFVDAMDLMDAGE 352
>gi|326477795|gb|EGE01805.1| Ku family DNA helicase [Trichophyton equinum CBS 127.97]
Length = 714
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
KGY YG V I+ + K + + +++++GF N R+ M + N+ IA+ N++A
Sbjct: 333 KGYEYGRTAVHITDSMENITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKA 392
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 405
+A+S++ A+ E+ A+ R V + G+ +V +L P++ PD LPFA
Sbjct: 393 IIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFA 446
Query: 406 EDVREFQFPSFSK 418
EDVR ++FP +
Sbjct: 447 EDVRCYRFPPLDR 459
>gi|242022021|ref|XP_002431440.1| ku P80 DNA helicase, putative [Pediculus humanus corporis]
gi|212516728|gb|EEB18702.1| ku P80 DNA helicase, putative [Pediculus humanus corporis]
Length = 569
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 40/274 (14%)
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT---GEEKFPT--LKKYSDKA------- 254
RK+R +P + L++ + +KI + +YKKT +KF T LK D
Sbjct: 34 TRKSRRKTP---WNSILDIGD-VKISISMYKKTDPKNSKKFDTKYLKSNDDDGDDNPTQN 89
Query: 255 --PSTDKFATHEVK---VDYEYKSVEDPSKV---VPPEQRIKGYRYGPQVVPISSAEWEA 306
PS + V+ ++Y+ +SV++ + + + I+GYRYG V+P S +
Sbjct: 90 YEPSQNSQTVPVVRDKILNYKPESVKNKELMDVEISEDDTIEGYRYGTTVIPYSRDDKTI 149
Query: 307 VKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKV 364
+++KP KS+ ++GFT+ S++ + + + + + A +A+SA+ +AMK+M V
Sbjct: 150 MEYKPGRKSLSVIGFTNMSSVPYYLLSGECSYVVTGRDKDENAEIALSAIVQAMKQMECV 209
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSE-----------KINIPDSFYFNVLPFAEDVREFQF 413
IVR V+ + + +G+L P V E + + F L F E+++ F
Sbjct: 210 GIVRKVYSD-DRGLSLGILYPFVEEIYSNDNDDDDGDVFSKECLLFVELAFQEEMKSIDF 268
Query: 414 PSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
PS + N Q +A D+L+ +DL + K
Sbjct: 269 PSLENLTNNITKN--QLDAIDDLIDSMDLMNAEK 300
>gi|403337575|gb|EJY68009.1| Ku P80 DNA helicase, putative [Oxytricha trifallax]
Length = 854
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 33/234 (14%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 276
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNFKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 277 PSKV-VPPEQRIKGYRYGPQVVP----ISSAEWEAVKFKP---EKSVKLLGFTDASNILR 328
K+ +P EQ IK + Y Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITIPSEQDIKAFNYEKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + + N R A + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRRSFNER---AFAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
E+ N + LP E+ R++QF S +P S +AA L+K LD
Sbjct: 300 EEANT----VYGQLPTNEEKRDYQFLSL--YPAS----RNHMQAAMELIKALDF 343
>gi|71023347|ref|XP_761903.1| hypothetical protein UM05756.1 [Ustilago maydis 521]
gi|46100722|gb|EAK85955.1| hypothetical protein UM05756.1 [Ustilago maydis 521]
Length = 808
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 32/197 (16%)
Query: 281 VPPEQR---IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+PP+ + ++ G ++P+ + KS+++L F +AS R Y M +
Sbjct: 346 LPPQSDANFTRAWKLGASLIPVPEESFG--NMDTHKSMEILHFFNASAYRREYNMDQIWY 403
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
A+ ++ + +S L RAM E++ +A+VR V + G + +G+L P V E + F
Sbjct: 404 VFADHAQIKSQLQISTLVRAMAELDVLAVVRLVRKDGAEP-ELGMLKPKVEEHN---EYF 459
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKG 448
+++ PF ED+R F FP + + P+E QEA D V L+L
Sbjct: 460 FYSKAPFREDLRRFPFPPLDRIVTTDGTELRQGPNIPDEADQEAMDAFVDSLEL------ 513
Query: 449 EILQPELTPNPALEVLN 465
P+P +VL+
Sbjct: 514 --------PDPWFDVLD 522
>gi|169617443|ref|XP_001802136.1| hypothetical protein SNOG_11900 [Phaeosphaeria nodorum SN15]
gi|160703409|gb|EAT80944.2| hypothetical protein SNOG_11900 [Phaeosphaeria nodorum SN15]
Length = 618
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
++ P TD A +V Y+ + E+P K V ++ +GY YG V IS ++ VK
Sbjct: 178 EEQPMTDLSAVRNQRV-YQVDNEEEPGMKKNVEMDELERGYEYGRTAVHISESDMNVVKL 236
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ + L+GF A R+ + N + + GN A +++S+ A+ E + A+ R
Sbjct: 237 ETTPMLSLIGFVKAEAFERYLPLSRSNFLVPQRGNQAAQLSLSSFIHALYEADCYAVARL 296
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSWQ--- 424
V ++ + V+V +L P +I + +V LPF ED+R ++FP K +S +
Sbjct: 297 VTKELKPPVIV-LLVP----RIEVEWEALVDVELPFEEDMRRYKFPPLDRKLTISGKVIT 351
Query: 425 -----PNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P ++ +A V +DL+ G+ E P
Sbjct: 352 EHKDLPTDELTDAMSKYVDAMDLSTFGRDEDGNP 385
>gi|332018465|gb|EGI59055.1| ATP-dependent DNA helicase 2 subunit 2 [Acromyrmex echinatior]
Length = 651
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 195/433 (45%), Gaps = 42/433 (9%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVV 104
+GVIL G++ + + + G ++ + L ++++ + +L++S++ L ++DAI
Sbjct: 1 MGVILMGSDSS---TSDSITGLDNAQELCNMQIGNWNLIKSIEKLQPTNQTCSWMDAIYA 57
Query: 105 GVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI---ARQMVAFGLRMKN 161
V+ + K+ K ++ + L++ D+ ED + + A ++A G R +
Sbjct: 58 AVEYI--KHECVDKCERKIILLSSFNEEENVVDMFQAEDIIEILNSEAVSLIAIGERALH 115
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
+ S + + L+N+ + + F + + +R ++ P+ +R
Sbjct: 116 EIDEDSQTPSEAL--------LMNVLQQINGQYLTFEHAMSDVRFYKRP-STKPLP-WRC 165
Query: 222 DLELSEKMKIKVWVYKKTGEEKFP--TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSK 279
+EL E + K E K P L + + + DK EV + + +++
Sbjct: 166 LMELGELCIPIAGISKMPSEVKLPEMVLMGKTSMSNTPDK----EVPIKNVVQWMDNNRT 221
Query: 280 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLF 338
+ E I+GY YG + +P+S +A+ K EKS K+ GFT N+ Y++ D +
Sbjct: 222 IHTEEDIIRGYVYGGKAIPVSDEAKKAMTPKNNEKSYKIHGFTKRENVAMEYWLSDGSYV 281
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
I P N A+ +L +AM + N +AIV V+R ++ +V L P+V + N P
Sbjct: 282 IV-PANEAASAPFYSLVQAMVDKNVIAIVEKVYRANTEANMVA-LFPSVDVE-NEPWCLI 338
Query: 399 FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE---AADNLVKMLDLAPSGKGEILQ--- 452
LPF D + + ++ P+ N+ QE A D+L++ L+L + + +
Sbjct: 339 EIGLPFERD-----YGAIAQKPLKGMTNQLSQEQDNAIDDLLRSLELPDAADDDTISSSE 393
Query: 453 ---PELTPNPALE 462
P P+P +
Sbjct: 394 KYLPGYMPDPGTQ 406
>gi|322789872|gb|EFZ15019.1| hypothetical protein SINV_15786 [Solenopsis invicta]
Length = 527
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 192/480 (40%), Gaps = 93/480 (19%)
Query: 6 EALLLLLDVSPSMHS-----VLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
E+L+ L+DV L D EK + +IQKK+ E+GVIL G+ E+
Sbjct: 1 ESLIFLVDVGVPCQDDQSSLQLLDKEKYILKHIIQKKIFLRPKDEIGVILMGSGSNESSS 60
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKG 119
E +++V+ L ++V + L+++++ L + +++AI VD +
Sbjct: 61 ATE---FDNVQELCSMQVGNWDLIKNIERLQTTNQSCSWMEAIYAAVDYI---------- 107
Query: 120 KKHLCLITDALCPLKDPDVGTKEDQ-----VSTIARQMVAFGLRMKNIVVRASLSGEPHM 174
K C+ L P+ D D T + + I Q + F M ++
Sbjct: 108 -KRECVGEKTL-PIADEDSQTASEVLLMEVIEQIGGQYLTFENAMSDVR----------- 154
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVW 234
F K+ S K + +EL +
Sbjct: 155 ------------FYKRPSTKPF---------------------QWHCQMELGDFCFPITG 181
Query: 235 VYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGP 294
+ K E K P + + S + A EV + + ++ + E I+GY YG
Sbjct: 182 IAKMPNEVKLPDMTLMGKLSASNKEEADKEVPIKNVAQWTDNNRTIHTQEDIIRGYVYGG 241
Query: 295 QVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSA 353
+ +P+S + + K EK K+ GFT N+ ++ D + I P N A+ +
Sbjct: 242 KAIPVSDESKKRMTPKNNEKCYKIHGFTARENVPMECWLSDGSYVIV-PANESASAPFYS 300
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVRE 410
L +AM + N VAIV V+R ++ ++ + +++P+ + + LPF D
Sbjct: 301 LVQAMVDKNVVAIVEKVYRANTEANMMALFP-----SVDVPNEPWCLIEIGLPFERD--- 352
Query: 411 FQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDLAPSGK-----GEILQPELTPNPALE 462
+ + ++ P+ Q +++Q +A D+L+ L+L + GE P P+P +
Sbjct: 353 --YGAIAQRPLKKMMDQLSKEQNDAIDDLLTSLELPDAADDDVTGGEKYLPGYMPDPGAQ 410
>gi|451997927|gb|EMD90392.1| hypothetical protein COCHEDRAFT_1195612 [Cochliobolus
heterostrophus C5]
Length = 733
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 193/482 (40%), Gaps = 68/482 (14%)
Query: 41 KNHEVGVILFGTEETE-NELTKEVGGYEHVKVLQDIK-VVDGHLVQSLKHL-PQGTCAGD 97
K+ +GVI T+ET+ + +E GY H++V IK + G + HL P T +GD
Sbjct: 49 KSALMGVIGCRTDETDLAGIIEEDEGYGHIRVFSKIKQYLLGDIRNLQAHLKPSRTNSGD 108
Query: 98 FLDAIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
L A+ V + M+ G K + + ++TD + D+ E S I
Sbjct: 109 LLSALAVAIHMIDTATRGAKGNPLKYDRRIIIVTDGRGEMVTDDL---EQLTSKIKDPEA 165
Query: 154 AFGLRMKNIVVRASLSG---EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
F + + I G E +N+ +L F + + + +
Sbjct: 166 PFEITLLGIDFDDPDVGFKEEKKDPQKAQNEAILKSFMQDCDGNFGTLATAIDQLHIPRL 225
Query: 211 RDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKF---- 260
++ PV +RG L L + K I V Y T K PT + + +T
Sbjct: 226 KETRPVHSYRGSLTLGDPTKYDATITIDVERYPCTMIAKPPTASSFVIRTDATGLSGPVI 285
Query: 261 -----------------ATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISS 301
A +V Y+ +S +P K V ++ +GY YG V IS
Sbjct: 286 ESSAAATDQDQAAADLSAVRNQRV-YQVESQTEPGVKKNVEMDELERGYEYGRTAVHISE 344
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
++ VK + +++++L+GF A + R + N + + N A + +S+ A+ E
Sbjct: 345 SDMNVVKLETQQAMELVGFVRAEDFERFLPLSRTNFIVPQKANQPAQLGLSSFIHALYEA 404
Query: 362 NKVAIVRCVWRQGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS- 417
+ A+ R V + + V++ + + P +++ LPF ED+R ++FP
Sbjct: 405 DCYAVARLVAKDLKPPVLLLLVPRIEPEWEALVDVE-------LPFEEDMRRYKFPPLDR 457
Query: 418 KFPVSWQ--------PNEQQQEAADNLVKMLDLAP------SGKGEILQPELTPNPALEV 463
K VS + P + A + V +DL+ + E +PE T +P +
Sbjct: 458 KLTVSGKVITEHKDLPTKNLLNAVSDYVDAMDLSTFDRDEDGNEDEYAKPEDTFSPLVHR 517
Query: 464 LN 465
+N
Sbjct: 518 IN 519
>gi|393218981|gb|EJD04469.1| SPOC domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 913
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+Q IKG++YG P ++ + K + + GF R M +V A+P
Sbjct: 377 DQLIKGFKYGASYAPCPDGQFP--RLSTRKGMDICGFFPDHLFRRELAMSEVQYVWADPS 434
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+S+ +++S++ +AM + VAI R V R +G+L P EK+ D F + +P
Sbjct: 435 SSQTQLSLSSIVQAMLSRHVVAIARYVSRDDMDP-KMGLLIPRQLEKV---DCFLWLQMP 490
Query: 404 FAEDVREFQFPSF-----------SKFPVSWQPNEQQQEAADNLVKMLDLAPSGK----G 448
FA+DVR++ FPS +K P + P E+Q E+ + V +DL +G G
Sbjct: 491 FADDVRKYTFPSLENLVSKKGERITKHP--FLPTEEQMESMEKFVDGMDLMHAGDKDETG 548
Query: 449 E---ILQPELTPNPAL 461
E P L+ NPA+
Sbjct: 549 ERTPWFDPRLSYNPAV 564
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 9 LLLLDVSPSMHSV----LPDVEKLCSRL----------------IQKKLIYG-KNHEVGV 47
+ +DVSPSM S+ + D + +R IQ+ + +G K + GV
Sbjct: 12 MFCIDVSPSMGSLRSVEVSDSQDGTTRTVEMTNLAWAMQYVLLKIQEMIFHGRKTDQCGV 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
ILFGTEET N + GGYEHV L I + + L++L T GD +DAI+V ++
Sbjct: 72 ILFGTEETNNVVNDSNGGYEHVTELIPIGQPNTGTLTKLQNLQPSTEIGDPIDAIIVAIE 131
Query: 108 MLIKKYGETYKGKKHLCLITDALCPL--KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+ + + L ++TD P+ +D DV K+ IA ++ + V+
Sbjct: 132 TQDRYLAKKKSWTRKLVVLTDGENPIEVEDWDVTVKKINDLQIATTIIGVDFDDEEFGVK 191
Query: 166 ASLSGEPHMRVIIENDNLLNIF-SKKSSAKTLFVDSTTSLRGARK-----TRDISPVTIF 219
E + +EN+ + F S + + +L ++ T+ T
Sbjct: 192 Q----EDKSPIKLENERFFHEFISSLHDDLGMIGTAAYALHECQRPEVKETKSALLGTTL 247
Query: 220 R-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKY--------SDKAPST 257
R GD++ E +++ + + K T PTLKK+ SD+AP+T
Sbjct: 248 RLGDVDTRPEEAIELPIKMSKCTAAVHPPTLKKFAKRVVSDTSDEAPAT 296
>gi|296419253|ref|XP_002839231.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635242|emb|CAZ83422.1| unnamed protein product [Tuber melanosporum]
Length = 665
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 168/447 (37%), Gaps = 93/447 (20%)
Query: 5 REALLLLLDVSPSMHSVLP-----DVEKLCSRL---IQKKLIYGKNHEV-GVILFGTEET 55
++A + ++D+ P++ V P D++ + + I + G+ +V GV+ F TE T
Sbjct: 4 KQATVYVIDLGPTLSRVHPSRGECDLDYALTYIWDKITATMSTGRKTDVIGVVGFRTENT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-------AGDFLDAIVVGVDM 108
+N + GYE++ VL I L+ L+ L + GD AI + VDM
Sbjct: 64 DNAMAT-ADGYENICVLAPIS---QFLLDHLRDLKRALVPSRGKGKGGDGFSAICIAVDM 119
Query: 109 LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN----IVV 164
+++ Y K +++ L+TD D Q+ + A G+ + V
Sbjct: 120 IMR-YCRKLKYIRNIVLVTDGRGEWDDEGCEDIVGQIQEEGINLTALGVDFDDEEYGFVE 178
Query: 165 RASLSGEPHMRVII--------ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + +I E L IF + A + ++ R +SP
Sbjct: 179 EGKVPKKARNEKVIKKMVEACNEGGQELGIFGTLAEAISELGKPRLKKIRPKRLRPLSPS 238
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T LS ++ P L K P V+ +ED
Sbjct: 239 TSSDILALLSRNPSVRA-----------PILPKLRGWDP-----------VNARAYQIED 276
Query: 277 PSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
+ + EQ KGY YG +VPIS+ + + E ++++GF R++
Sbjct: 277 GTTAGGMMDIEKEQMEKGYNYGRTIVPISATDEAITVLETEPGLRIIGFVPVEKYRRYFS 336
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M N + N +A++A+S+L A+ E+ + V+
Sbjct: 337 MSTTNAIVGAKDNLKASMALSSLIHALFELESLIDVQ----------------------- 373
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSK 418
+PF+EDVR ++FP K
Sbjct: 374 ----------VPFSEDVRHYRFPPLDK 390
>gi|302656140|ref|XP_003019826.1| hypothetical protein TRV_06114 [Trichophyton verrucosum HKI 0517]
gi|291183598|gb|EFE39202.1| hypothetical protein TRV_06114 [Trichophyton verrucosum HKI 0517]
Length = 675
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 184/454 (40%), Gaps = 77/454 (16%)
Query: 61 KEVGGYEHVKVLQDIKVVDGH------LVQSLKHL-----PQGTCAGDFLDAIVVGVDML 109
KE+G Y VK + +DG L+ LK L P T GD + +I++ +DM
Sbjct: 17 KEIGQYVFVKP----RGLDGSNTSLRALMPDLKELRSLIKPSNTDNGDAISSIILAIDM- 71
Query: 110 IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLS 169
I KY + K K+ + L+T+ P+ + T ++ ++V G+ ++ +
Sbjct: 72 ITKYCKKLKYKRKIVLVTNGKGPMDLDGMDTIAGKIREEGIELVILGVDFDDLDF--GVK 129
Query: 170 GEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE-- 227
E V EN++ L ++ S + + + + F+GD +L +
Sbjct: 130 EEDKDAVKAENESSLQKLCDVCDGVYGTLEQAISELDTPRVKVVRGIPSFKGDFKLGDPD 189
Query: 228 ----KMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAPSTDKFATHE 264
+ I+V Y +T + P + D T K ++E
Sbjct: 190 KYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQETGDSSANLKDARTDTGKSISNE 249
Query: 265 VKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
+ +S V D V V + KGY YG V I+ ++ K + + ++++
Sbjct: 250 LTSVRNARSYQVTDSGVVGGKRDVERDALAKGYEYGRTAVHITDSDENITKLETKAALEI 309
Query: 318 LGFTDASNILRHYYMKDVNLFIAEP--------GNSRATVAVSALARAMKEMNKVAIVRC 369
+GF N+ + +K + + P N++A +A+S++ A+ E+ A+ R
Sbjct: 310 VGFIPIENVC--FIIKSILIIYKLPFTDYVLIRTNNKAIIALSSIINALHEVESYAVGRL 367
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ--- 424
V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 368 VTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVV 421
Query: 425 ------PNEQQQEAADNLVKMLDLAPSGKGEILQ 452
PNE A + V+ ++L G+ + Q
Sbjct: 422 KEHRNLPNENLLAAMEKYVENMELVQPGEEGVDQ 455
>gi|392594323|gb|EIW83647.1| Ku DNA-binding complex, Ku70 subunit [Coniophora puteana RWD-64-598
SS2]
Length = 648
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 210/528 (39%), Gaps = 92/528 (17%)
Query: 5 REALLLLLDVSPSMHSVLPD-------VEKLCSRL-----IQKK-LIYGKNHEVGVILFG 51
R+ +L +D SPSM + D +L + L IQKK ++ G N VG++LF
Sbjct: 28 RDVILFCIDCSPSMQELKEDPVYEGVQTSRLLTSLEAAMQIQKKKVLVGPNDCVGILLFN 87
Query: 52 TEETENELTKEVGGYEHVK----VLQDIKVVDGHLVQSLKHLPQGTCA-GDFLDA----- 101
T T +E G +K V Q + V+ +Q L L +G D L +
Sbjct: 88 TTRT----NEEAGYASEIKKGCFVYQQLGQVNAPKIQELIQLVEGAREDSDLLKSEYPPL 143
Query: 102 ---------IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR-- 150
+ + +I+ K + LITD DP GTK Q+ T AR
Sbjct: 144 EGKRVPIGDVFTSCNWVIRDNAPK-TATKRVFLITDN----DDPHPGTK--QLLTSARTT 196
Query: 151 --QMVAFGLRMKNIVV----RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
++ G++++ + R + + V+I + + + +++ + L
Sbjct: 197 LVDLIESGVQVEPFFIGTEDRPFDPTKFYSSVLINSGFDDEAEDEGTLPESISITRINDL 256
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ ++ IF EL+ I V Y E+K + K + D + +
Sbjct: 257 LAQMRIHEVPKRAIFNITFELANDFVIGVKGYGLVTEQKKGSYKYFVDLGDRMEVAESRT 316
Query: 265 VKVDYEYKSVEDPSKVV-------PP-----EQRIKGYRYGPQVVPISSAEW----EAVK 308
V +D E ++ + S++V PP + + G YG +VVP + E
Sbjct: 317 VYIDEEQQAEVEKSQLVYGMELGAPPANENSDDEMDGAEYGTRVVPYGQRPFYDAEEVRS 376
Query: 309 FKP---EKSVKLLGFTDASNILRHYYMKDVNLFIAEP---GNSRATVAVSALARAMKEMN 362
F+ E +KLLGF D + + +K + SR T +A+ + M E +
Sbjct: 377 FRTLELEPGLKLLGFKDRNELAFEDNVKHSTFIYPDEQKYAGSRRT--FTAMLKVMLEKD 434
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFS 417
K+ +VR + R+ V +L +EK+ N P F+ LPFA+D+R +
Sbjct: 435 KIGLVRALLRKNAAPVFCAMLPQ--AEKVEEGGWNEPGGFHLIPLPFADDIRA------A 486
Query: 418 KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
++ ++ + AA + L + K P+ PNPAL N
Sbjct: 487 PIEEGFRASDDVKNAARAWIDKLCV----KNGAYPPDTYPNPALAFHN 530
>gi|302845110|ref|XP_002954094.1| hypothetical protein VOLCADRAFT_118635 [Volvox carteri f.
nagariensis]
gi|300260593|gb|EFJ44811.1| hypothetical protein VOLCADRAFT_118635 [Volvox carteri f.
nagariensis]
Length = 1066
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 13/138 (9%)
Query: 287 IKGYRYGPQVVPIS--------SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 338
+KG+ YG Q VPI+ + + + KF+ EK LLGF +A ++ H + + ++
Sbjct: 517 VKGFSYGKQAVPIAQYTDEQAHAMDEQMRKFR-EKDFSLLGFVNAGSVPHHRLIDEPHVV 575
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
+ + +S A +A AL +KE + +VR + R+ +S +G+LTP++S ++P +
Sbjct: 576 LGDSPSSAAVIAALALV--LKERGQAGVVRFLIRK--ESPQLGLLTPHLSNSPDVPHALL 631
Query: 399 FNVLPFAEDVREFQFPSF 416
+ LPFAED+R + F +F
Sbjct: 632 LSPLPFAEDIRTYTFSTF 649
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDI 75
M LP + +L ++ KL+ NHEV V+L+GT+ T ++L + Y HV VL+ +
Sbjct: 114 MQPYLPLLHRLVFHVLNVKLLSKPNHEVAVVLYGTKGTRHKLYDASDPLSYHHVTVLRPL 173
Query: 76 KVVDGHL 82
+ + +L
Sbjct: 174 QNLGSYL 180
>gi|324505212|gb|ADY42245.1| X-ray repair cross-complementing protein 5 [Ascaris suum]
Length = 338
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD--YEYKSVEDPSKV 280
LEL E +K+ + ++KK E P +K K D+ EVK YE +D S+
Sbjct: 149 LELGEDIKLPLQLFKKNQE---PDMKMNFAK---IDQTTGAEVKRQTIYERPIGDDSSQS 202
Query: 281 VPP------------EQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 327
P E IKGY +G +VP + + + +K E + +KLL F S IL
Sbjct: 203 ATPNANASGPKILRKEDVIKGYTFGATIVPFNEEDQKEYGWKRESRCMKLLQFAKRSEIL 262
Query: 328 RHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
HY M + P N + AVSAL RAM E + VA+VR V+ ++ L P
Sbjct: 263 EHYLMDGGVYYCLPPANDQEGATAVSALVRAMLEEDCVALVRYVYNAASLPRIM-ALFPR 321
Query: 387 VSEK 390
+S K
Sbjct: 322 ISNK 325
>gi|389742273|gb|EIM83460.1| SPOC domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 866
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 47/224 (20%)
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
D S+ + E+ ++G++YG VP ++E ++ K + +++ F + M +V
Sbjct: 348 DLSQRIEKEELVRGFKYGSSYVPCPDGQFERLETK--RGIEICAFFKSVAFRPELAMGEV 405
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNK-------------VAIVRCVWRQGQQSVVVGV 382
A+P + VA+S++ +AM +K AI R + G +GV
Sbjct: 406 QYIWADPSSPNQQVAMSSIIQAMLSADKHDPKKKDKSHYPYFAIARWCNKDGSDP-KMGV 464
Query: 383 LTPNVSEKINI-------PDSFYFNVLPFAEDVREFQFPSF-----------SKFPVSWQ 424
L P SEK++ P+SF +PFA+DVR++ F +K P +
Sbjct: 465 LQPCRSEKVDYFLWVQVRPESF----MPFADDVRKYNFAPLEYLTNKRGDRVTKHP--YI 518
Query: 425 PNEQQQEAADNLVKMLDLAPSGK----GE---ILQPELTPNPAL 461
P E Q +A DN V LDL +G+ GE P L+ NPA+
Sbjct: 519 PTEDQLDAMDNFVDALDLMNAGEKNEAGEREPWFDPRLSYNPAI 562
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLD 100
K + GVILFGT+ T N L + G YE+V + +G + L L GD +D
Sbjct: 62 KTDQCGVILFGTDGTRNALNDKRGDYENVTEYIPVGQPNGVTMAKLAALQPSETTGDPID 121
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
++V ++ + + L+T+ P++ D
Sbjct: 122 GLIVAIEAQSVYLASKKTWTRKMVLLTNGEGPIEIQD 158
>gi|237830351|ref|XP_002364473.1| hypothetical protein TGME49_112510 [Toxoplasma gondii ME49]
gi|211962137|gb|EEA97332.1| hypothetical protein TGME49_112510 [Toxoplasma gondii ME49]
Length = 1107
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 174/451 (38%), Gaps = 105/451 (23%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
LVQ L+ + D +D +VV VDM+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKL-SQNNVSFLVFSDC---QSSPAT 216
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASL--------SGEPHMRVIIENDNLLNIFSKKSS 192
ED + + ++ G+R+ I+V S+ G+P R+ N + ++ +
Sbjct: 217 PED-IPAVRDRLEVLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALA 272
Query: 193 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 245 PTLKK-------------YSDKAPST----DKFAT--------------HEVKVDYEYKS 273
PTL+K +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYFR 392
Query: 274 VEDPS----KVVPPEQRIKG-------------------------------YRY--GPQV 296
DP K+ P+ R + Y Y G Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHV 542
>gi|330924860|ref|XP_003300810.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
gi|311324871|gb|EFQ91096.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
Length = 659
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 201/516 (38%), Gaps = 96/516 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P + K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPSMLQQPPKSDNKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ + +EH +L D+ V V+ L+ L G +
Sbjct: 88 GTEKTD--MGDGDNAFEHCYLLADLDVPSAQDVKRLRDLVDNEEEAEEILKPAKGGASIS 145
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K V +D T AR + G
Sbjct: 146 NVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---VKADKDTAVTRARDLYDLGCTID 201
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P V I + + + S + S S
Sbjct: 202 LFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINS 261
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL +I V ++ K E + P +
Sbjct: 262 KATPRRA-------LFSLPLELGPDFRIGVKGYILIKRQEHIKSCYIWVGGEKPQIATSS 314
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T ++ +D S+ + + K Y++G + + E ++ F E ++++G
Sbjct: 315 TAQIS--------DDISRNIEKAEIRKAYKFGGDAITFTPEEITQIRQCFG-EPIIRIIG 365
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S++ + K + ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 366 FKPLSSVPIWANTNKSIFIYPSETDYIGSTRVFSALQQKLIKSKKMGLVWFIARR-NAAP 424
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P +EKIN +P + LPFA+D+R QFP+ P EQ +
Sbjct: 425 TLAALIPG-AEKINGDGEQTMPPGLWLVPLPFADDIR--QFPT---------PPEQPLKT 472
Query: 433 ADNLVKMLDLA------PSGKGEILQPELTPNPALE 462
D L + L P G I P PNP L+
Sbjct: 473 TDALTDKMRLIIEQLQLPKG---IYDPSKYPNPDLQ 505
>gi|443899962|dbj|GAC77290.1| DNA-binding subunit of a DNA-dependent protein kinase [Pseudozyma
antarctica T-34]
Length = 837
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 108/521 (20%), Positives = 201/521 (38%), Gaps = 89/521 (17%)
Query: 25 VEKLCSRLIQKKLIYG-KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDG- 80
V + S I + ++ G K VG++ +G+ T N + + G + + VL + +D
Sbjct: 93 VCQFVSARIAEIILRGLKTTRVGIVTYGSPRTNNSIPGIDDYNGIDEI-VLPALPTLDTL 151
Query: 81 HLVQSLK--HLPQGTCAGDFLDAIVVGVDMLIK------KYGETYKGKKHLCLITDALCP 132
LVQ L+ H QG GD L A+V + + K + K+ + L+TDA
Sbjct: 152 DLVQCLRAVHPDQGLKHGDPLAALVDAIQLSADPHKGGIKDSQRNSWKRTVYLVTDAKAE 211
Query: 133 LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF----S 188
D+++ LR+ + +L+ +P V +N+ F
Sbjct: 212 FGYNGADAISDKIN-----QENIDLRLLGVDFDEALNPKPDDSVKCKNERFWKDFLAGIP 266
Query: 189 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFR----GDLELSEKMKIKVWVYKKTGEEKF 244
A S+ + TR T DL +I + +YK T +
Sbjct: 267 NSGFATAASAIEQASMPNVQLTRPAPTKTTLTFGDPNDLASRSAFQIAIALYKMTDPARP 326
Query: 245 PTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS-------------------------- 278
T K S A + + A E + D + ++ +P+
Sbjct: 327 MTQSKISKLARESAQ-AAQERQRDQDRRNHANPTSTPSVETKEEESSLIYRADLKREFFL 385
Query: 279 --------------KVVPPEQR---IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 321
+ +PP+ + ++ G ++P+ + ++ + K ++++ F
Sbjct: 386 LDQLAAVGHANKQPEALPPDSEANFTRAWKLGASLIPVPDEAFGSMDTR--KGMEVVHFF 443
Query: 322 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
AS R Y + + A+ +A + +S L RAM E++ +A+VR V + G + +G
Sbjct: 444 SASAYRREYNVDQIWYVFADHAQLKAQLQLSTLVRAMVELDVLAVVRLVRKDGAEP-ELG 502
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEA 432
+L P V E +++ PF ED+R F FP + + P++Q Q+
Sbjct: 503 ILKPRVEEHNEF---LFYSRAPFREDLRRFPFPPLDRIVTTDGTEVRQAPTIPDDQDQKC 559
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALEVLNICGYFGFL 473
D V ++L P ++L + NPA+ L F+
Sbjct: 560 MDAFVDSMEL-PDEWFDVLD---SYNPAIHGLKTAVRHRFV 596
>gi|328874182|gb|EGG22548.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 825
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRAT 348
Y YG + V S E E +K + + L+GF A+ I R +K ++ LF E +T
Sbjct: 325 YYYGGEPVVFSKEEVEKIKSIDRQGMVLMGFKPANTIKRQQTIKHMSFLFPDEKTVKGST 384
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY-----FNV-- 401
V ++AL M E+++VAI + + R G +V ++ E IN DS FNV
Sbjct: 385 VTLNALIDKMIELDRVAICKFLPRAGTLPRMVALIAQ--EEIINPKDSTQIQSRGFNVFY 442
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
LP+A+D+R+FQF + +K NE+Q +AA ++K +
Sbjct: 443 LPYADDIRQFQFNTTTK------ANEKQIDAAKKIIKTFKI 477
>gi|171690386|ref|XP_001910118.1| hypothetical protein [Podospora anserina S mat+]
gi|170945141|emb|CAP71252.1| unnamed protein product [Podospora anserina S mat+]
Length = 650
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 206/505 (40%), Gaps = 72/505 (14%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S + K + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSASMLQPPPSSDDKKSDKDSAVVAALKCAHQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFL------- 99
GTE++ ++ ++ GY H + ++ V V+ L+ L +G A + L
Sbjct: 89 GTEKSKFRDDTGSRSGSGYPHCYLFTELDVPGAEDVKKLRDLVEEGEDADEVLVPSKEPV 148
Query: 100 --DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
++ + + + G + L +ITD ++P K+ + S R + L
Sbjct: 149 LMSNVLFCANQIFTTNAANF-GSRRLFIITDN----ENPHGNDKQAKSSAAVRAKDLYDL 203
Query: 158 RMKNIVVRASLSGEP-----------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG 206
+ + S + +P + + E DN + + +S ++S S
Sbjct: 204 GVTIELFPVSRAKKPFDLSKFYDDIVYRSSVEEGDNPEGVKTSRSGDGLTLLNSLISNIN 263
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV- 265
+++T S + R EL+ + I V Y ++K P Y + A E
Sbjct: 264 SKQTPKRSYFS--RMPFELAPGLTITVKGYMPLHQQK-PARTCYVWLGGEQAQLAQSETT 320
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
KVD E ++VE + K Y++G + + + E +++K K ++++GF +N
Sbjct: 321 KVDSEARTVEK-------SEIKKAYKFGGEYIYFTPEEAKSLKELDTKVLRIIGFKPLAN 373
Query: 326 I-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
I + K +F +E G +T SAL + + KV I V R+ V+V V+
Sbjct: 374 IPMWASVKKSTFIFPSEDGYVGSTRVFSALWQKLLTSKKVGIAWYVARKNANPVMVAVIP 433
Query: 385 PNV-------SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
S +P + LPFA+D+R + + +K P ++ + ++
Sbjct: 434 SGSLNDEDEDSTAPYLPAGLWLYPLPFADDIRSVEIKTSTK------PADELTDKMREII 487
Query: 438 KMLDLAPSGKGEILQPELTPNPALE 462
+ L L + P PNPAL+
Sbjct: 488 QNLQLPKA----TYNPLKYPNPALQ 508
>gi|189209548|ref|XP_001941106.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977199|gb|EDU43825.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 655
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 201/516 (38%), Gaps = 96/516 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P + K +L+Q+++I N +G++LF
Sbjct: 24 KDAVLFAIDVSPSMLQKPPKSDDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 83
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ + +EH +L D+ V V+ L+ + G +
Sbjct: 84 GTEKTD--VGDGDNAFEHCYLLADLDVPSAQDVKRLRDMVDNEEEAEEILKPAKGGASIS 141
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K + +D T AR + G
Sbjct: 142 NVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---IKADKDTAVTRARDLYDLGCTID 197
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P V I + + + + S + S S
Sbjct: 198 LFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAISSTSKVAKSGEGISLLKQLISSINS 257
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL +I V ++ K E + P +
Sbjct: 258 KATPRRA-------LFSLPLELGPDFRISVKGYILIKRQEHIKSCYVWVGGEKPQIATSS 310
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T ++ +D S+ + + K Y++G + + E ++ F E ++++G
Sbjct: 311 TTQIS--------DDISRNIEKTELRKAYKFGGDAITFTPEEITQIRQCFG-EPIIRIIG 361
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S++ + K ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 362 FKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQQKLIKSKKMGLVWFIPRRNA-AP 420
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P V EKIN +P + LPFA+D+R QFP+ P EQ +
Sbjct: 421 TLAALIPGV-EKINEDGEQTMPPGLWLVPLPFADDIR--QFPT---------PPEQPLKT 468
Query: 433 ADNLVKMLDLA------PSGKGEILQPELTPNPALE 462
D L + L P G I P PNP L+
Sbjct: 469 TDALTDKMRLIIEQLQLPKG---IYDPSRYPNPDLQ 501
>gi|339239001|ref|XP_003381055.1| putative Ku70/Ku80 beta-barrel domain protein [Trichinella
spiralis]
gi|316975959|gb|EFV59329.1| putative Ku70/Ku80 beta-barrel domain protein [Trichinella
spiralis]
Length = 887
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGN 344
+K +R+G VVP++ + K+K EK K+LGF D + + ++ D F+ +P +
Sbjct: 534 VKAFRFGSSVVPLNKFDLNEAKYKDREKCFKVLGFFDRCMVKQWHFAGDGTHFVFGDPKS 593
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPF 404
+ A A SAL + K +KV +VR + +GVL P + + + F F +LPF
Sbjct: 594 ATACQAFSALIHSCKSNSKVILVRYAYNVASNP-KIGVLIPLLKDTY---ECFVFVILPF 649
Query: 405 AED---VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 443
ED V + F K V+ ++Q EA D L+ +++
Sbjct: 650 EEDLIIVDQKSIGEFEKCHVT----DEQLEAVDKLIDAMNMT 687
>gi|164423551|ref|XP_962503.2| hypothetical protein NCU08290 [Neurospora crassa OR74A]
gi|157070143|gb|EAA33267.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 647
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 210/523 (40%), Gaps = 111/523 (21%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 31 KDAVLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLF 90
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI------- 102
GTE+++ G GY H +L D+ + V+ LK L + GD D I
Sbjct: 91 GTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIED---GDDEDEIMVPSKEP 147
Query: 103 VVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------- 147
V+ +ML + G + L ++TD DP G K+ + S
Sbjct: 148 VIMSNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDL 203
Query: 148 --------IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIF 187
I+R+ F L +N A S P + + N + NI
Sbjct: 204 GVVIELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNIN 263
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFP 245
SK++ ++ F + L +TI +G + L+ + + +VY+ GEE+
Sbjct: 264 SKQTPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQ 313
Query: 246 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
++ + +VD+ ++VE + KGY++G + + E
Sbjct: 314 VVQ-------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELA 353
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
+K +K+++++GF S I + K + +F +E +T SAL + + + +KV
Sbjct: 354 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKV 413
Query: 365 AIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKF 419
I V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 414 GIAWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHV 468
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P ++ + +++ L L + + P PNP+L+
Sbjct: 469 TAPPRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQ 507
>gi|401883055|gb|EJT47291.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 795
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+P E+ +K +RYG +P+ +E +K +K V++LGF N + + +V
Sbjct: 355 IPKEELVKAWRYGSSWIPVEDDTFEPLKT--QKGVEVLGFIPQKNYM---LIGEVRYLWP 409
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--NVSEKINIPDSFY 398
+ +S+A + S+ A+ VAI R V + G +GV P ++ + D Y
Sbjct: 410 DLKSSKAQIQFSSFVSALVTTGMVAITRWVTKDGSPP-EIGVCIPKQEFGDEKRL-DLMY 467
Query: 399 FNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDL 442
+ LPFA+D F FPS + + + P ++Q + D LVK LDL
Sbjct: 468 WIRLPFADDDHRFFFPSLTNYKSVSGNEITEHPYIPTQEQSDLMDELVKGLDL 520
>gi|406700347|gb|EKD03519.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 798
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+P E+ +K +RYG +P+ +E +K +K V++LGF N + + +V
Sbjct: 355 IPKEELVKAWRYGSSWIPVEDDTFEPLKT--QKGVEVLGFIPQKNYM---LIGEVRYLWP 409
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--NVSEKINIPDSFY 398
+ +S+A + S+ A+ VAI R V + G +GV P ++ + D Y
Sbjct: 410 DLKSSKAQIQFSSFVSALVTTGMVAITRWVTKDGSPP-EIGVCIPKQEFGDEKRL-DLMY 467
Query: 399 FNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDL 442
+ LPFA+D F FPS + + + P ++Q + D LVK LDL
Sbjct: 468 WIRLPFADDDHRFFFPSLTNYKSVSGNEITEHPYIPTQEQSDLMDELVKGLDL 520
>gi|161789038|sp|Q7SA95.2|KU70_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=Protein mus-51
Length = 645
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 210/523 (40%), Gaps = 111/523 (21%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI------- 102
GTE+++ G GY H +L D+ + V+ LK L + GD D I
Sbjct: 89 GTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIED---GDDEDEIMVPSKEP 145
Query: 103 VVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------- 147
V+ +ML + G + L ++TD DP G K+ + S
Sbjct: 146 VIMSNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDL 201
Query: 148 --------IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIF 187
I+R+ F L +N A S P + + N + NI
Sbjct: 202 GVVIELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNIN 261
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFP 245
SK++ ++ F + L +TI +G + L+ + + +VY+ GEE+
Sbjct: 262 SKQTPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQ 311
Query: 246 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
++ + +VD+ ++VE + KGY++G + + E
Sbjct: 312 VVQ-------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELA 351
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
+K +K+++++GF S I + K + +F +E +T SAL + + + +KV
Sbjct: 352 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKV 411
Query: 365 AIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKF 419
I V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 412 GIAWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHV 466
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P ++ + +++ L L + + P PNP+L+
Sbjct: 467 TAPPRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQ 505
>gi|340380522|ref|XP_003388771.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 579
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 198/489 (40%), Gaps = 68/489 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKL-------CSR-LIQKKLIYGKNHEVGVILFGTEET 55
T++ L+LL+DVS M + + + C+R ++ K+I + VGV+ FGT +
Sbjct: 32 TKDCLILLIDVSLGMFVKDEETKGIPFELCIKCARSVLLNKVISSEKDLVGVVFFGTNKE 91
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC----------AGDF-LDAIVV 104
N ++HV +LQD+ + D ++ L+ + + + DF L +
Sbjct: 92 NNP-----SDFKHVYILQDLDMPDAPRIKELETMLEDEGFQTFEKDYGHSNDFSLSDVFW 146
Query: 105 GVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV 164
++ G ++ L + +P + + Q T A+ + G+ ++ + +
Sbjct: 147 TCSTMLSTSGAKSSHRRILLFTNNDHPHQSNPAL---QRQAKTKAKDLAENGIEVELMHI 203
Query: 165 RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR-KTRDISPVTIFRG-D 222
+ + + I+ +D+ S K F + T +R K R + +T G D
Sbjct: 204 GSGFNVTSFYQEIVFSDDGDGTSFPDPSEK--FEELLTRVRSKELKKRALQRITFSLGPD 261
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
LEL V VY E K P+ + DK E+K + K ED ++
Sbjct: 262 LELG------VGVYCMVRETKKPSFIRL-------DKRTNEELKTQTK-KLCEDTGSILL 307
Query: 283 PEQRIKGYRY---GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LF 338
P IK Y+ G + V E + +K + L+GF S + H+Y+K N ++
Sbjct: 308 PTD-IKYYQVLGAGGEKVIFEEEEIKELKNFGKPGFTLMGFRPKSKMKMHHYIKPANFIY 366
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI- 393
E S +T S L R VA+ + + R + V L P E I I
Sbjct: 367 PDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSPPIFVA-LVPQEEELDDSNIQIS 425
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P F+ LPF+ED+R P + P + + +Q + A ++K L Q
Sbjct: 426 PPGFHVIFLPFSEDIRSLDLP--DEMP---KASHEQIDKAKEIIKKLSFN-------FQS 473
Query: 454 ELTPNPALE 462
E NP ++
Sbjct: 474 ESFENPVIQ 482
>gi|392576409|gb|EIW69540.1| hypothetical protein TREMEDRAFT_71662 [Tremella mesenterica DSM
1558]
Length = 846
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKLLGFTDASNILRHYYMKDV 335
++V E +K +++G VP+ EA F+P K V++LGF I RH M +V
Sbjct: 380 EMVAKEDIVKAWKFGSTWVPM-----EADTFEPLNTTKGVEILGFFPREAIKRHLLMGEV 434
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP- 394
+ + +A + S+L M A+VR V + Q ++G P + N P
Sbjct: 435 RFIWPDLTSPKAQLQFSSLVEGMYLREMCAVVRWVLKD-QSDPIIGACVP----EFNYPG 489
Query: 395 -----DSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKML 440
D ++ LPFAED F FPS + + S P + Q + D+ V+ +
Sbjct: 490 EDKRLDYMFWCQLPFAEDEHNFWFPSLTDYKTSSGKVITEHPLIPTQDQCDLMDDFVQSM 549
Query: 441 DL 442
DL
Sbjct: 550 DL 551
>gi|296415193|ref|XP_002837276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633137|emb|CAZ81467.1| unnamed protein product [Tuber melanosporum]
Length = 645
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 174/427 (40%), Gaps = 59/427 (13%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSL 86
++Q ++I N +G++LFGTE T+ + GG YEH +L D+ + D ++ L
Sbjct: 76 VLQSRIISNPNDMMGILLFGTEATKFDTGGGGGGGVGGGYEHCYLLLDLDIPDAEGIKGL 135
Query: 87 KHL--------PQGTCAGD--FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDP 136
K+L P A + + + V+ + ++ ++ L ++TD P
Sbjct: 136 KNLIEDPEEFEPLLKPAKEQVSMANVFFAVNQIFTTKAANFQSRR-LFIVTDEDDP-HST 193
Query: 137 DVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN------DNLLNIFSKK 190
D K V T AR + G+R+ + G ++ + + +
Sbjct: 194 DKALKNSSV-TRARDLYDLGVRIDPFFIYNPAKGGFDSSKFYDDIVYRSPTDEEDDYHAA 252
Query: 191 SSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 250
S K +S+ K++ +F LEL + I V Y L K
Sbjct: 253 VSGKMRLRQMVSSI----KSKSTPKRALFTNKLELGPGLIIGVKGY---------LLFKR 299
Query: 251 SDKAPSTDKFATHEVKVDYEYKSV---------EDPSKVVPPEQRIKGYRYGPQVVPISS 301
+KA S H V E + E+ +KV + K Y++G + + +
Sbjct: 300 QEKARS------HYVYTGGEKAQIVKGVTTWLAEETAKVADKTEIRKAYKFGGEQILFTP 353
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKE 360
E +A++ E ++++GF AS + +K N ++ E G +T +AL + +
Sbjct: 354 EEMKAMRDFGEPVIRIIGFKPASAVRFDMNVKPANFIYPDETGYIGSTRVFAALHAKLVK 413
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-----IPDSFYFNVLPFAEDVREFQFPS 415
KV I C+ R+ +V +L P+V E + IP F+ LPFA+DVR+
Sbjct: 414 DGKVGIAWCISRKNAAPQIVAIL-PSVEELGDDGVQIIPPGFFLVHLPFADDVRQNPETK 472
Query: 416 FSKFPVS 422
+ P S
Sbjct: 473 LVRAPAS 479
>gi|164656268|ref|XP_001729262.1| hypothetical protein MGL_3729 [Malassezia globosa CBS 7966]
gi|159103152|gb|EDP42048.1| hypothetical protein MGL_3729 [Malassezia globosa CBS 7966]
Length = 539
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
+ Y+ G +VP+ +A E +++L F AS R Y+M + IA P + RA
Sbjct: 137 RAYKLGASLVPLENAP---PALPTEAGLEILHFVSASTYRREYHMGETYYVIAHPSSKRA 193
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 407
VA+S+L +A A+ R V R + +L P + + D+FY +PF +D
Sbjct: 194 QVALSSLVQAAAVKGVYALCRLVTRPNADPKLC-ILAPLIESEY---DAFYLVHVPFRDD 249
Query: 408 VREFQFPSFSKFPVSWQ---------PNEQQQEAADNLV 437
V+ FP + S P +QQ D V
Sbjct: 250 VKRVAFPPLDRVMTSTGASIFEHPTIPTNEQQSTMDAFV 288
>gi|46401618|dbj|BAD16622.1| MUS51 [Neurospora crassa]
Length = 645
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 207/520 (39%), Gaps = 111/520 (21%)
Query: 8 LLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
+L +DVS SM S L +++Q+++I +GV+LFGTE
Sbjct: 32 VLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLFGTE 91
Query: 54 ETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI-------VVG 105
+++ G GY H +L D+ + V+ LK L + GD D I V+
Sbjct: 92 KSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIED---GDDEDEIMVPSKEPVIM 148
Query: 106 VDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------- 147
+ML + G + L ++TD DP G K+ + S
Sbjct: 149 SNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGVV 204
Query: 148 -----IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIFSKK 190
I+R+ F L +N A S P + + N + NI SK+
Sbjct: 205 IELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNINSKQ 264
Query: 191 SSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLK 248
+ ++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 265 TPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQVVQ 314
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+ +VD+ ++VE + KGY++G + + E +K
Sbjct: 315 -------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELAELK 354
Query: 309 FKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 355 QMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIA 414
Query: 368 RCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 415 WFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHVTAP 469
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P ++ + +++ L L + + P PNP+L+
Sbjct: 470 PRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQ 505
>gi|336470968|gb|EGO59129.1| protein Ku70 [Neurospora tetrasperma FGSC 2508]
gi|350292044|gb|EGZ73239.1| protein Ku70 [Neurospora tetrasperma FGSC 2509]
Length = 645
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 212/523 (40%), Gaps = 111/523 (21%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIDVSKSMLKPPQTTGDKKADKDSALTAALTCAYQIMQQRIISQPRDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI------- 102
GTE+++ G GY H +L D+ + V+ LK L + G+ D I
Sbjct: 89 GTEKSKFRDDSGSGTGYPHCYLLSDLDIPGAEDVKKLKALVED---GEDEDEIMVPSKEP 145
Query: 103 VVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------- 147
V+ +ML + G + L ++TD DP G K+ + S
Sbjct: 146 VIMSNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDL 201
Query: 148 --------IARQMVAFGLR--MKNIVVR-----ASLSGEPHMR-----VIIENDNLLNIF 187
I+R+ F L +I+ R A S P + + N + NI
Sbjct: 202 GVVIELFPISREDKKFDLSKFYDDIIYRDPAAEAGQSEGPKTSKSGDGLTLLNSLISNIN 261
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFP 245
SK++ ++ F + L +TI +G + L+ + + +VY+ GEE+
Sbjct: 262 SKQTPKRSYFSNLPFELAPG--------LTISIKGYMPLTRQTPTRSCYVYE--GEEQAQ 311
Query: 246 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
++ + +VD+ ++VE + KGY++G + + E
Sbjct: 312 VVQ-------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELA 351
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
+K +K+++++GF S I + K + +F +E +T SAL + + + +KV
Sbjct: 352 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKV 411
Query: 365 AIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKF 419
I V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 412 GIAWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHV 466
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P ++ + +++ L L + + P PNP+L+
Sbjct: 467 TAPPRPADELTDQMRQVIQNLQLPKA----MYDPRRYPNPSLQ 505
>gi|115386128|ref|XP_001209605.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190603|gb|EAU32303.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 713
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 168/422 (39%), Gaps = 88/422 (20%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GVI T+ T NEL + + ++ VL +IK L+ ++ L P T GD +
Sbjct: 53 LGVIGLRTDGTSNELEDD-PHFSNISVLSNIK---QFLMPDIRKLDDDLKPSQTDKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT-------KEDQVSTIARQM 152
AIV+ + M I + + K K+ + L+T+ + + GT KED + +
Sbjct: 109 SAIVLAIQM-ISVHCKKLKYKRKIVLVTNGQGRMSNE--GTDEITKKIKEDNIELVILGA 165
Query: 153 ----VAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR 208
+G++ +N R + EN+ LL ++ ++ S
Sbjct: 166 DFDDPEYGVKEENKDARKA-----------ENEELLRNLAESCDGAYGTLEQAVSELDIP 214
Query: 209 KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDK 259
+ + + + FRG L+L ++I V Y +T K P+ Y SD A +
Sbjct: 215 RVKVVKSMASFRGHLQLGNPEVYETAVRIPVERYYRTYVAKPPSASSYVLRSDLAAGEET 274
Query: 260 FATHEVKVDYEYK----------------SVEDPSKV-----VPPEQRIKGYRYGPQVVP 298
E E + V D S V + KGY YG V
Sbjct: 275 GGQPESAAAQENEPGDGNTLTSVRNLRTYQVTDESAPGGKIDVERDDLAKGYEYGRTAVH 334
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
I + + + ++L+GF +N R N +AT+A+S+ A+
Sbjct: 335 IDTTDENITTLETFAGLELIGFI--ANDQR--------------ANDKATLALSSFIHAL 378
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSF 416
E+ A+ R V ++ + +VV +L P++ PD LPFAEDVR ++FP
Sbjct: 379 FELECYAVARLVTKENKPPIVV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPL 432
Query: 417 SK 418
K
Sbjct: 433 DK 434
>gi|312306086|gb|ADQ73897.1| DNA-dependent protein kinase [Alternaria alternata]
Length = 660
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/511 (20%), Positives = 199/511 (38%), Gaps = 86/511 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSP+M P E K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPTMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLP----------QGTCAGDFLD 100
GTE+T+ L +++ +L D+ V V+ L+ + + T G +
Sbjct: 88 GTEKTD--LKDGDNTFQNCYLLADLDVPSAQDVKRLRDMVENEEEAEEILKPTKDGASMA 145
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K V +D T AR + G
Sbjct: 146 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---VKADKDTAVTRARDLYDLGCTID 201
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R +V + +P + I + + + S + S S
Sbjct: 202 LFPISQPDHTFDRSRFYGDLVYPTSPSDPDAPIAIPSTTQVAKSGEGISLLKQLISSINS 261
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
R+ +F +EL ++I V Y L K + S +
Sbjct: 262 KAAPRRA-------LFSLPMELGPDLRIGVKGY---------ILIKRQEHVKSCYVWVGG 305
Query: 264 E---VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLL 318
E + V + D ++ + + K Y++G + + E ++ F E ++++
Sbjct: 306 EKPQIAVSTTTQMANDSARAIEKTELRKAYKFGGDAITFTPEEITQIRQCFG-EPVIRII 364
Query: 319 GFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF S++ + K ++ +E +T SAL + + K+ +V + R+ +
Sbjct: 365 GFKPISSVPIWANTNKSTFIYPSEADYIGSTRVFSALQHKLLKSQKMGLVWFIPRRNA-A 423
Query: 378 VVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ L P EK+N +P + LPFA+D+R+F P +P +
Sbjct: 424 PTLAALIPG-EEKVNEEGEQLMPPGLWLVPLPFADDIRQFPTP-------PERPLKTTDA 475
Query: 432 AADNLVKMLDLAPSGKGEILQPELTPNPALE 462
DN+ +++ KG I P PNP L+
Sbjct: 476 LTDNMRLIIEQLQLPKG-IYDPSRYPNPDLQ 505
>gi|452984054|gb|EME83811.1| hypothetical protein MYCFIDRAFT_65414 [Pseudocercospora fijiensis
CIRAD86]
Length = 665
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 210/518 (40%), Gaps = 90/518 (17%)
Query: 5 REALLLLLDVSPSM-------HSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVIL 49
++A+L +D S SM + PD K L+Q+++I N +G++L
Sbjct: 29 KDAVLFAIDASASMLRKPSEIDAKKPDTALSSTAAALKCAYALMQQRIISNPNDMMGILL 88
Query: 50 FGTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDA---- 101
F TE++ E + Y H +L D+ V V+ L+ L + A D L A
Sbjct: 89 FNTEKSKFQEQDGESRNWQYPHCYLLMDLDVPAAADVKQLRTLVEDEEEAADILQASKDE 148
Query: 102 -----IVVGVDMLIKKYGETYKGKKHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAF 155
++ + + + ++ L L+TD P D D + + A+ +
Sbjct: 149 VSMANVLFCANQVFTTKAPNFSSRR-LFLVTDNDYPHASDRDA---RNSAAVRAKDLYDL 204
Query: 156 GL-------------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL 196
G+ R N ++ +S +P + + +D I + SSAK
Sbjct: 205 GVTIELFPISHPDRGYTFDRTRFYNDIIYSSTPSDPDAPMPLTSD----IKAASSSAK-- 258
Query: 197 FVDSTT---SLRGARKTRDISPVTIFRGDLELSEKMKIKV---WVYKKTGEEKFPTLKKY 250
D T SL + +R+ T F E+ +KI V ++KK + P Y
Sbjct: 259 --DGITLLQSLINSVASRNAPRRTFFNVPFEIGPGLKIGVKGYIIFKK----QEPKRTSY 312
Query: 251 SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
P ++K ++ V E+ ++ V + K +++G + V S E +K
Sbjct: 313 VYLPPDSEK---AQIAVGSSTMVEEETARTVEKTEIRKAFKFGGETVTFSLEEEAKIKDF 369
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVR 368
+ ++++LGF S +L + D ++FI +E +T SAL + + + K +
Sbjct: 370 GDPTIRILGFKPMS-MLPMWATLDKSVFIYPSEETWVGSTRVFSALHQKLLKDQKFGLAW 428
Query: 369 CVWRQGQQ----SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 424
+ R+ +V+ G N ++P + VLPFA+D+RE + + P
Sbjct: 429 YIARRNATPKLAAVIPGAEERNEGGDQHMPPGMWVKVLPFADDIREPPETNVVRAP---- 484
Query: 425 PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+ +A +V+ L L P G + P PNPAL+
Sbjct: 485 --DDVVDAMRKVVQQLQL-PKG---VYDPTKYPNPALQ 516
>gi|219121746|ref|XP_002181221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407207|gb|EEC47144.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 517
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 32/333 (9%)
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLK-DPD-VGTKE-----DQVSTIARQMVAF 155
VVG D L+ E L L T+A P K +PD V TK D S+ F
Sbjct: 176 VVGFDFLLSASYEQPMEASSLSLNTNAPKPAKTEPDTVSTKRLKKSTDYDSSETEDEDGF 235
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
+ + + G+ + + LL+ ++K+ + V + + K R +
Sbjct: 236 ATCTQKTELDRNDPGQILYSTKEDREQLLSSLAEKTGGDVMAVSTLRQILQVDKGRSLKK 295
Query: 216 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY-------SD--KAPSTDKFATHEVK 266
T + +L ++ + + V K +E +KK SD DK +V+
Sbjct: 296 ATKRKIELRIAPGIVLPVRSLKMLSKETTLGMKKTAVIGTNKSDTYSTAGNDKAEMDDVR 355
Query: 267 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE--KSVKLLGFTDAS 324
Y + + VV P++ IK RYG ++P+SS ++E +K +++LG+T +
Sbjct: 356 NVYMFVDPDHKDDVVEPQETIKAVRYGSDLIPMSSYDYEGLKSSANYIPYLEILGYTSRA 415
Query: 325 NILRHYYMKDVNLFIAEP-----GNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
I + I P +SR A A+SALA++++++++VAI + +G +
Sbjct: 416 AI-------PLVALIGPPYALSGSDSRKACAAISALAKSLEQLDRVAICTYMKTKGGDPI 468
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREF 411
+ G+ P + F LPFA D+++
Sbjct: 469 LGGLF-PLSEPQFKHAARLMFLQLPFAGDMKQL 500
>gi|195438100|ref|XP_002066975.1| GK24271 [Drosophila willistoni]
gi|194163060|gb|EDW77961.1| GK24271 [Drosophila willistoni]
Length = 690
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 189/467 (40%), Gaps = 61/467 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVLP-DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
MA +E+L+++LD+ K + +I+ K++ K + +L GTE E
Sbjct: 1 MATNKESLIVILDIRTCAQEEFKLKAVKCAAEIIKDKIVSDKKDYISFVLVGTEHNEKN- 59
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGETYK 118
V YEH+++ L++ K + + T G +LD + V ++M ++ ++K
Sbjct: 60 APNVKKYEHIQL-----CTWPLLLKFFKFVNETATDKGQWLDGLKVALEM--QEQALSFK 112
Query: 119 GKKHLCLITDALCPLKDPDVGTKE-DQVSTIARQMVAFGLRM----KNIVVRASLSGEPH 173
+ L+ L D + +E + I ++ G+ + NI + + E +
Sbjct: 113 PARQRILL------LFDFNSAKQEYEDFQEITNNLLNSGIELIVGSHNIAYKDN--PETN 164
Query: 174 MRVIIENDNLLNIFSKKSS---------AKTLFVDSTTSLRGARKT-RDISPVTIFR--- 220
+ I N S+K+S A L +L ++T R+I VT R
Sbjct: 165 LPQAIFN------LSRKASPEELDNQKYALQLVFQCNATLCNFKETLRNIFKVTNRRPWS 218
Query: 221 --GDLELSEKMKIKVWVYKKTGEEKFPTLKK-YSDKAPSTDKFATHEVKVDYEYKSVEDP 277
L + K+ + + E LKK +S+K + + +K
Sbjct: 219 WNAKLFIGSKISLNLQGIIAMKNESLVKLKKVWSEKKEWVSREERYYIK----------G 268
Query: 278 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-V 335
S++ P PE I GY G VP E + P + +GF + +I Y+ D +
Sbjct: 269 SEITPLPEDLIDGYMLGGTAVPYDDTLIEPKEPHP-AGLHFVGFVEWESIPDEYFCGDSL 327
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
+ + + GNS + + AL RA+ +V + ++ + V VL P E+ N P
Sbjct: 328 YMLVHQKGNSVSARKLDALVRALILKKRVILCWKIFSLKFNTPRVVVLIPQQPEE-NKPA 386
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
S Y L + + FPS + N Q EA DNL+ +DL
Sbjct: 387 SLYMLELSYHAQHHFWDFPSLRTAKT--ESNSDQLEAIDNLIDSMDL 431
>gi|403345721|gb|EJY72241.1| Ku P70 DNA helicase [Oxytricha trifallax]
Length = 817
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 183/452 (40%), Gaps = 73/452 (16%)
Query: 1 MARTREALLLLLDVSPSMHSVLP--------DVEKL---CSRLIQKKLIYGKNHEVGVIL 49
M + R++++ L+D SMH P +V+++ C ++ K+I N ++G++L
Sbjct: 37 MKQNRDSVVFLIDCHRSMHEKNPHNGDGDPSNVQQILDACLSFMKTKIITSDNDKIGIVL 96
Query: 50 FGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-----------HLPQGTCAGDF 98
+G ++T N+L + ++ V Q + D ++ L+ +P+ T F
Sbjct: 97 YGCKQTNNQLN-----FNNIYVFQKLDSPDAQSIKQLETKMQDFTKQYGFVPKETHTPLF 151
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ + K E K + L T+ P D D G + + A + + G+
Sbjct: 152 EALWICHQEF---KVVEKQSYNKRIFLFTNEDNPGNDNDKGMAQQR----ANDLSSLGVD 204
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS----LRGARKTRDIS 214
++ + + P V N++ ++ ++ L + T S L + ++
Sbjct: 205 IELFPMPKAQQQRPVFDVKKFYANIIQFDEEEQFSEMLGIQGTQSRISELMKRIRMKEFR 264
Query: 215 PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK----YSDKAPSTDKFATHEVKVDYE 270
T + L+ K +I + Y K PT K + + ST +F
Sbjct: 265 KRTQGKCLFSLTPKAQIALSFYTTVMPTKKPTAAKVNAVNNKQLRSTQRFI--------- 315
Query: 271 YKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI---- 326
+D V+ Q Y G + V I+ + + +KF +KL+GF S +
Sbjct: 316 ---CQDTGSVLYKNQIANHYPVGGEKVNITQDDVKQIKFFDNVGMKLMGFKPRSALKVFH 372
Query: 327 -LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV-VGVLT 384
++H Y ++ E + ++ + AL M +K+AIVR + R SVV L
Sbjct: 373 NIKHSYF----IYPDEKRITGSSQVMDALINEMISDDKIAIVRFIPRDN--SVVRFCALV 426
Query: 385 PNVSEKIN------IPDSFYFNVLPFAEDVRE 410
P EK++ P F LP+A+D+R+
Sbjct: 427 PQ-KEKVDDEDGFQTPPGFQLIFLPYADDIRD 457
>gi|390597184|gb|EIN06584.1| Ku DNA-binding complex Ku70 subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 663
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 207/536 (38%), Gaps = 95/536 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE------KLCSRLI---------QKKLIYGKNHEVGVIL 49
R+ +L +D S SM + D K C L+ +KK++ G N +G++
Sbjct: 28 RDVILFAIDCSSSMLELRDDPTYEEGEVKTCHLLVALQSAMEISKKKVLVGPNDSIGILF 87
Query: 50 FGTEETENELTKEVGGYEHVK----VLQDIKVVDGHLVQSLKHL---------------- 89
F T N+ +G +K V Q I V+ +Q L L
Sbjct: 88 FNTTR-RNQKGDNMGQSSEIKPGAYVYQPISTVNASSIQELIRLLNEARENPSYLSETFP 146
Query: 90 --PQG--TCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDP-DVGTKEDQ 144
P G GD + + +I+ G K + LITD P D +++
Sbjct: 147 PLPDGEKMAMGD----VFTSCNWVIRD-GAPKTATKRIFLITDEDDPTPSGYDTSAAKEK 201
Query: 145 VSTIARQMVAFGLRMKNIVV---------RASLSGEPHMRVIIENDNLLNIFSKKSSA-- 193
+ T A Q L I+V R+ G+ + V+ N ++L + A
Sbjct: 202 LITSA-QTTLTDLTQAGIMVEPFFISTEERSFDIGKFYTSVL--NSHMLPTEEEDGGALP 258
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ + + L G + ++ ++F LEL+ +I V Y E+K + D
Sbjct: 259 EQISITRIDDLLGQMRFHEVPKRSLFSIGLELAPGFRISVKGYGLVTEQKKGKSMYFVDM 318
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVV----------PPEQRIKGYRYGPQVVPISSAE 303
+ + VD +Y+ D S+++ Q +G G + P+ +
Sbjct: 319 GDRMEVAESRAAYVDEDYQEERDKSEILFGMELGSAAASAGQEDQGASGGGVIRPVERGK 378
Query: 304 W------EAVKFKP---EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSA 353
E F+ E +KLLGF D S + +K V ++ E S + S+
Sbjct: 379 RVFYTADEVRGFRTMGLEPGLKLLGFKDRSELAFEDNVKHSVFIYPDEMTYSGSKRTFSS 438
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK----INIPDSFYFNVLPFAEDVR 409
L ++M + +K+AIV + R+ +L P ++ N P F+ LPFA+D+R
Sbjct: 439 LLKSMLKKDKIAIVLALLRRNASPTFCAML-PQAEKQDEAGWNDPAGFHLIPLPFADDIR 497
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
+ ++ +E ++AA + V+ L L K +P+ PNP+L N
Sbjct: 498 A------AALEEGFRASEDVKKAAQSWVEKLCL----KNGTYEPDSYPNPSLAFHN 543
>gi|367022532|ref|XP_003660551.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
gi|347007818|gb|AEO55306.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
Length = 645
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 203/504 (40%), Gaps = 72/504 (14%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S + K + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSSSMLQQPVATDSKKADKDSAITAALKCAYQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEETE--NELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL------PQGTCAGDFLDA 101
GTE+++ +E G GY H +L D+ V V+SLK L P G A
Sbjct: 89 GTEKSKFRDEAGGRSGSGYPHCYLLTDLDVPTAEDVKSLKALVEEGEDPDGVLVPAKEPA 148
Query: 102 IVVGVDMLIKKYGETYK---GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ V + T G + L +ITD P + D K + A+ + G+
Sbjct: 149 SMANVLFCANQVFTTNAPNFGSRRLFIITDDDSPHGN-DKAAKS-SAAVRAKDLYDLGVV 206
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDST-TSLRG----------A 207
++ + S G+ +D I + +A+ FVD TS G +
Sbjct: 207 IELFPI--SHGGKDFDMAKFYDD----IVYRDPAAEAGFVDRVKTSKSGDGISLLNSLIS 260
Query: 208 RKTRDISPVTIFRGDL--ELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE- 264
+P + +L EL+ + I V Y ++ P Y + A E
Sbjct: 261 NINSKQTPKRAYFSNLHFELAPNLTISVKGYLPLHRQQ-PARTCYVWLGGERAQLAQSET 319
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V+VD ++V D S+V K Y++G + + E A+K K ++L+GF S
Sbjct: 320 VRVDSTTRTV-DKSEVK------KAYKFGGEYIYFKPEEAAALKNLGSKVLRLIGFKPRS 372
Query: 325 NI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV- 382
+ + K + +F +E +T SAL + + E +KV I V R+ +V +
Sbjct: 373 LLPMWASVKKSIFIFPSEEHYVGSTRVFSALWQKLLEADKVGIAWFVARENAHPSMVAII 432
Query: 383 ----LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
L SE +P + LPFA+DVR + +P ++ + +V+
Sbjct: 433 PSRALDDGSSETPYLPAGLWLYPLPFADDVRNVD------LTMPPRPADELTDRMRQIVQ 486
Query: 439 MLDLAPSGKGEILQPELTPNPALE 462
L L + + P PNP+L+
Sbjct: 487 NLQLPKA----MYNPSKYPNPSLQ 506
>gi|308807210|ref|XP_003080916.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
gi|116059377|emb|CAL55084.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
Length = 540
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 30/170 (17%)
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
L+GF DA I R +K + FIA G + AV+AL RA NKVAI C + + +
Sbjct: 241 LVGFIDAKRITRDLCLKKSH-FIA--GEEKGCAAVNALIRACDVENKVAI--CAYVRAKS 295
Query: 377 S-----VVVGVLTPNVS----------EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
+ ++ L P+V +++ P+ F+ LPF +D+R + + S
Sbjct: 296 AGFRYVALLPQLAPHVEPGLGDADDAIARLDPPEGFHVFYLPFRDDLRHPESVAGSVKKP 355
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE----VLNIC 467
+ + ++Q +AA N+V+ + L P+ TPNPAL+ VL +C
Sbjct: 356 APRATKEQIDAARNVVEAIRLTG------WHPKQTPNPALQTHYRVLEMC 399
>gi|281204870|gb|EFA79065.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 775
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 183/439 (41%), Gaps = 59/439 (13%)
Query: 5 REALLLLLDVSPSMHSVLP--------DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R+ ++ L+D S +M P + K + I K+I + +G+ L+ T++ +
Sbjct: 65 RDCIIFLIDTSKAMFEPDPVTKEKPFDNAIKCLIQTITDKIITSDSDLIGLCLYNTDKNK 124
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD----------FLDAIVVGV 106
N + +E++ VL D+ + D + L+ + +G + F DA+
Sbjct: 125 N-----LNDFENIYVLFDLDIPDPKTILLLEDILEGDYSSFGGYTENKDMVFCDALWTCS 179
Query: 107 DMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI--ARQMVAFGLRMKNIVV 164
M K + L T+ P +D D +V I A+ + G+ ++ +
Sbjct: 180 TMF--SNCNIKLSHKRIFLFTNQDQPTQDND----NQKVIAIQRAKDLSDLGIEIELFSM 233
Query: 165 RASLSGEP-------HMRVIIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+LS P +I+++D +++ FS S LF + R K R + +
Sbjct: 234 NNALSDHPFDFSLFYQEIIILQDDQIVDQDFSSASRFSQLF---SKLKRKQFKKRSLGQL 290
Query: 217 TIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 275
++ G D+ + ++ V ++ PT+ + P +K + +
Sbjct: 291 PMYIGKDVVIGTQLYSLVSAATRSS----PTMLDPASNLP---------IKTLTKNICMS 337
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL-RHYYMKD 334
+ ++P + Y YG + V E ++++ + LLGF + L RH +K
Sbjct: 338 SGTTLLPSQIAYCMY-YGGEPVVFEKREVDSIRSLDRVGLTLLGFKPSKAALKRHRLVKH 396
Query: 335 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
N LF E + +T A++AL AM ++VAI + + R +V ++ E + +
Sbjct: 397 SNFLFPDEKSITGSTRALNALLDAMLSSDRVAIAKFLPRSNTSPRMVALVPQEEDEDLRM 456
Query: 394 PDSFYFNVLPFAEDVREFQ 412
P F+ LP+A+D+R Q
Sbjct: 457 PRGFHIIYLPYADDIRAIQ 475
>gi|353244109|emb|CCA75559.1| related to ATP-dependent DNA helicase II, 80 kDa subunit
[Piriformospora indica DSM 11827]
Length = 858
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 289 GYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRAT 348
Y+YG +P+ A++E ++ K + +LGF R + M +V + + +
Sbjct: 373 AYKYGSTYIPVDKADFETLQTV--KGLDILGFIPQHKFRREWSMGEVYYIWGDDQSGKMQ 430
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDV 408
+A S++ RAM + AI+R V + VG+ P + EK D + +PFAED
Sbjct: 431 LAFSSIVRAMAQEELCAIIRMV-TLNNSAPKVGIAVPRILEKA---DCLLW--MPFAEDN 484
Query: 409 REFQFPSFSKF 419
R F F S ++
Sbjct: 485 RNFAFQSLTRL 495
>gi|167537231|ref|XP_001750285.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771275|gb|EDQ84944.1| predicted protein [Monosiga brevicollis MX1]
Length = 784
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 187/488 (38%), Gaps = 104/488 (21%)
Query: 12 LDVSPSMHSVLPDVEKLCSRL----------IQKKLIYGKNHEVGVILFGTEETENELTK 61
LDV +M P + S L I+ +++ HEV ++LFG TE++L
Sbjct: 9 LDVGHAMALPQPKLRGFGSHLEAAVAALSYSIRNRVLLTPKHEVALVLFGAATTEHDLED 68
Query: 62 E---VGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
E VG + +LQ + ++L+ + + + + ++ GE
Sbjct: 69 ESVLVGFAAGLALLQQRQ-------EALRSESKTKASKMQMRLHLFTNQTIVSTAGED-D 120
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
G H + + LK + +G+++ + A S +
Sbjct: 121 GSDHASALINVAQDLK---------------LESFVYGIQLSDDASLADAS-----KATP 160
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 238
+ L + S+ + F + + L+ RK R + P F +L ++ ++I V Y
Sbjct: 161 SHTTLQDFGSRLGAQLYNFGEISDMLKLFRK-RVVKPAA-FNVNLRVA-NVEIPVSGYDI 217
Query: 239 TGEEKFPTLKKYSDKA---PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQ 295
T KK S++ PS + +V+ + Y ++ + + + R + YRYG
Sbjct: 218 VKRATVSTFKKLSNQVEIDPSDGD--SGKVQREVTYHLDDEMATEIQKDDRQRAYRYGST 275
Query: 296 VVPI-----SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRA-T 348
++P S+ E+ K + EK + L F A++I RH YM D V LFI +PG+ A
Sbjct: 276 LIPWPEEAESNPEY---KVEMEKQLTTLYFAPAASIPRHVYMGDSVKLFIPKPGSEPAVA 332
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN---------------------- 386
+A+ AL M++ VAIV V+ + + S +G+L P
Sbjct: 333 IALDALVAGMEKRRVVAIVAYVYNK-RSSPKLGMLFPRQLVADEDEDEEEEEEDGEDQHE 391
Query: 387 ----------------------VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 424
+ K + +F +LPF ED R F FPS
Sbjct: 392 GSDGHGPATGSSLGSSVGASAVLDGKSRRQRALHFVLLPFQEDARHFGFPSLKSLINELH 451
Query: 425 PNEQQQEA 432
EQ A
Sbjct: 452 CQEQATPA 459
>gi|396479528|ref|XP_003840776.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
gi|312217349|emb|CBX97297.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
Length = 654
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 198/510 (38%), Gaps = 84/510 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSP+M P E K +L+Q+++I N +G++LF
Sbjct: 29 KDAVLFAIDVSPTMLERPPKSEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 88
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T +L ++H +L D+ V V+SL+ L + G +
Sbjct: 89 GTEQT--DLKDGDSTFQHCYLLADLDVPSAQDVKSLRDLVEDEEEAEKILKPAKEGYSIS 146
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P K + +D T AR + G
Sbjct: 147 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPAK---IKADKDTAVTRARDLYDLGCTID 202
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P + + + + + S + S S
Sbjct: 203 LFPISQPGHTFDRSRFYDDLVYPTSPSDPDAPISLASTTKIAKSGEGISLLKQLISSINS 262
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL +I V +V K E + P +
Sbjct: 263 KATPRR-------ALFTLPLELGPDFRIGVKGYVLIKRQEHVKSCYVWVGGEKPQIATSS 315
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T + +D ++ + + K Y++G + + + E ++ F + ++++G
Sbjct: 316 TSHL--------ADDSARTIEKTELQKAYKFGGEAITFTPEEITKIRQCFG-DPVIRIIG 366
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S + L K L+ +E +T +AL + + + K+ +V + R+ S
Sbjct: 367 FKPISCLPLWANVNKATFLYPSEVDYIGSTRVFAALQQKLLKSQKMGLVWFIARRN-ASP 425
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P+ EK+N P + LPFA+D+R+F P S P E
Sbjct: 426 ALCALIPS-EEKLNADGEQTTPPGLWLIPLPFADDLRQFPEPPDS-------PLRTTNEL 477
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALE 462
D + +++ KG + P PNP L+
Sbjct: 478 TDKMRLIIEQLQLPKG-MYDPSKYPNPNLQ 506
>gi|451993350|gb|EMD85824.1| hypothetical protein COCHEDRAFT_1198766 [Cochliobolus
heterostrophus C5]
Length = 782
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 108/516 (20%), Positives = 198/516 (38%), Gaps = 96/516 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L + VSPSM P E K +L+Q+++I N +G++LF
Sbjct: 30 KDAVLFAIHVSPSMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 89
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTEET+ L ++H +L D+ V V+ L+ + + G +
Sbjct: 90 GTEETD--LKDGDNTFQHCYLLADLDVPSAQDVKRLRDMVEDEEEAEKILKPAKDGASIA 147
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K +D T AR + G
Sbjct: 148 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---AKADKDAAVTRARDLYDLGCTID 203
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P V I + + + S + S S
Sbjct: 204 LFPISQPDHNFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINS 263
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL ++I V ++ K E + P +
Sbjct: 264 KATPRRA-------LFSLPLELGPDLRIGVKGYILIKRQEHVKSCYVWVGGEKPQIVTSS 316
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T + +D +++V + K Y++G + + E ++ F + ++++G
Sbjct: 317 TAHM--------ADDTAQIVEKAELRKAYKFGGDAITFTPEEITKIRQCFG-QPVIRIIG 367
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S++ + K ++ +E +T SAL R + + K+ +V + R+ +
Sbjct: 368 FKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNA-AP 426
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P EK N +P + LPFA+D+R QFP+ P E+ +
Sbjct: 427 TLAALIPG-EEKTNEEGEQVMPPGLWLIPLPFADDIR--QFPT---------PPEEPLKT 474
Query: 433 ADNLVKMLDLA------PSGKGEILQPELTPNPALE 462
D L + L P G I P PNP L+
Sbjct: 475 TDVLTDKMRLIIEQLQLPKG---IYDPSRYPNPDLQ 507
>gi|405118366|gb|AFR93140.1| damaged DNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 799
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
+K +++G VP+ + + + K +++LGF NI R++ + + + + +
Sbjct: 349 VKAWKFGSTWVPVPEKTFTTMDTR--KGIEVLGFFPVENIRRYHLIGEARYVWPDLLSPK 406
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-------KINIPDSFYF 399
A + SAL AM + A+ R V + G + +G P + K +I Y+
Sbjct: 407 AQIQFSALIEAMHDRKMCAVTRWVLKDGGEP-TLGACVPVIENKGADEEGKPSILPYMYW 465
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDL 442
LPFAED R F+FPS + + P ++Q D LV +DL
Sbjct: 466 LKLPFAEDERTFRFPSLTTIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDL 517
>gi|156849195|ref|XP_001647478.1| hypothetical protein Kpol_1018p159 [Vanderwaltozyma polyspora DSM
70294]
gi|156118164|gb|EDO19620.1| hypothetical protein Kpol_1018p159 [Vanderwaltozyma polyspora DSM
70294]
Length = 629
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S+ + +K + + GF D + R+Y + + A+ G
Sbjct: 321 KAYRYGTDYVVLPSSISDERFYKTSPGIDIRGFLDKDLLPRYYLSSESRVIFADTKMGTL 380
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS------FYF 399
V++ A M E +KVAIVR V + + V + L P++ ++ NI D F
Sbjct: 381 ADVVSMGAFVDVMIENDKVAIVRYVQKPNSE-VEMCALIPHIFKQ-NIGDESEDLRVFIL 438
Query: 400 NVLPFAEDVREFQFPSFSK 418
N LPFAED R FP ++
Sbjct: 439 NRLPFAEDERVSDFPKLTE 457
>gi|255713294|ref|XP_002552929.1| KLTH0D04774p [Lachancea thermotolerans]
gi|238934309|emb|CAR22491.1| KLTH0D04774p [Lachancea thermotolerans CBS 6340]
Length = 602
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 33/261 (12%)
Query: 213 ISPVTIFRGDLELS-------------EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ PV IF+G+L L + + +KV Y T + +L +
Sbjct: 206 VKPVRIFQGELRLGAPISDEDVTGPSYDSITVKVEGYPAT--KAVSSLNRRVVAKSEDGT 263
Query: 260 FATHEVKVDYEYKSVEDPS------KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
F VK EY++++D V E K YRYG V + A +K +
Sbjct: 264 FGP--VKSVIEYEAIDDGEDSEGGVASVSKEYVTKAYRYGSDYVVLPQAIESERTYKTKP 321
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRAT-VAVSALARAMKEMNKVAIVRCVW 371
+ L GF +I RH+ + I A +RA V+ SAL +M ++ K AI R V
Sbjct: 322 GLDLRGFVGNESIPRHFLSSESTFIIPATKDGTRADFVSFSALVDSMIKLRKFAIARYVQ 381
Query: 372 R---QGQQSVVVGVLTPNVSEKINIPDSF----YFNVLPFAEDVREFQFPSFSKFPVSWQ 424
+ + Q ++ +L P ++ +++ N LPFAED R +P ++ S
Sbjct: 382 KLNGEVQMCLLCPILIPKKRKEPGDDETYTRALVLNRLPFAEDERCSDYPRLAQAAASSD 441
Query: 425 PNEQQQEA-ADNLVKMLDLAP 444
+ +A L+ +DL P
Sbjct: 442 AETAEIDALMGELIDTMDLGP 462
>gi|401411521|ref|XP_003885208.1| hypothetical protein NCLIV_056045 [Neospora caninum Liverpool]
gi|325119627|emb|CBZ55180.1| hypothetical protein NCLIV_056045 [Neospora caninum Liverpool]
Length = 1064
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 191/535 (35%), Gaps = 134/535 (25%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG-----------GYEHVKVLQDIKVVDGH 81
+Q+ +VGV+ FG+ T N L G GY HV V +
Sbjct: 81 VQRLAATSAKVDVGVVCFGSCRTNNPLAIPGGQPGDEGDEEDDGYRHVDVAVQPESASWK 140
Query: 82 LVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTK 141
LV++++ + D +DA+VV VD + K YG + + + + C +
Sbjct: 141 LVKAVEEIENSDHRSDAIDAVVVAVDTVEKTYGPKL-AQNDVSFLMFSDCQSRP---AAP 196
Query: 142 EDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDST 201
ED + + ++ + G+RM IVV SL P + +L + S
Sbjct: 197 ED-IPAVQERLQSLGIRMHVIVVDGSLPEYPPILSPPSTASLDRLPSPVHPTLPSLARLA 255
Query: 202 TSLRGARK-------TRDISP----VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 250
++L R SP T R +LE+S+ I V+V+ +T +E PT +K
Sbjct: 256 STLIPLRSFLASPFLRAFFSPPKRLSTKCRVNLEISKAFVIPVYVFVRTRKESLPTFRKR 315
Query: 251 ----------------------SDKAPSTDKF-------------ATHEVKVDYEYKSVE 275
D A ++D+ +VKVD Y
Sbjct: 316 VFVGSSCSQSATRRRTESSLPRGDAAVASDEVLRRGEKLTENEEDGWRDVKVDRFYYRAN 375
Query: 276 DPSKV---------------------------VPPE-------QRIKGYRYGPQVVPISS 301
DP + P R+ YRYG Q+V +S+
Sbjct: 376 DPDRTPVKYGEQDKKRPDGISILGRDESEDEGTPKRDAAGGYVHRLYAYRYGKQLVAVSA 435
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
E +A K + E + +LG T I R + + N + VA+ +L A++ +
Sbjct: 436 VEQQAFKEQTEAGLVVLGVTRRDGIQRWWNLGPAEYVTCALNNRPSLVALRSLVLALERL 495
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVS---------------------EKINIPD----- 395
+ V + VWR G + +V +L P+V EK + D
Sbjct: 496 DSVLLCSFVWRAGYPAKLVALL-PHVGGREAGRRPLSDSWQASEAIKREKEELDDDTRED 554
Query: 396 ----SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ LP AED+ E + PS S Q +A + L+ L L P G
Sbjct: 555 DWTYGLHLIYLPVAEDMLELRLPSLPSVTPS------QLQAVETLIDSLTL-PDG 602
>gi|451850214|gb|EMD63516.1| hypothetical protein COCSADRAFT_190760 [Cochliobolus sativus
ND90Pr]
Length = 653
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 197/510 (38%), Gaps = 93/510 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L + VSPSM P E K +L+Q+++I N +G++LF
Sbjct: 30 KDAVLFAIHVSPSMLEKPPKSEDKKAERDSPASAALKCAYQLMQQRIISNPNDMMGILLF 89
Query: 51 GTEETE---NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
GT+ET+ + +V + VK L+D+ + + LK G + ++ +
Sbjct: 90 GTKETDLKDGDTDLDVPSAQDVKRLRDMVEDEEEAEKILKPAKDGAS----IATVLFCAN 145
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---------- 157
+ + ++ L L+TD P+K +D T AR + G
Sbjct: 146 QIFTTKAPNFSSRR-LFLVTDNDYPVK---AKADKDAAVTRARDLYDLGCTVDLFPISQP 201
Query: 158 -------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
R + +V + +P V I + + + S + S S R+
Sbjct: 202 DHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINSKATPRRA 261
Query: 211 RDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+F LEL +KI V Y K+ K + +K TH
Sbjct: 262 -------LFSLPLELGPDLKIGVKGYILIKRQEHVKSCYVWVGGEKPQIVTSSTTH---- 310
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASN 325
+D ++ V + K Y++G + + E ++ F E ++++GF S+
Sbjct: 311 -----MADDTARTVEKAELRKAYKFGGDAITFTPEEITKIRQCFG-EPVIRIIGFKPLSS 364
Query: 326 I-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
+ + K ++ +E +T SAL R + + K+ +V + R+ + + L
Sbjct: 365 VPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNA-APTLAALI 423
Query: 385 PNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
P+ EK N +P + LPFA+D+R QFP+ P E+ + D L
Sbjct: 424 PS-EEKTNEEGEQVMPPGLWLVPLPFADDIR--QFPT---------PPEEPLKTTDALTD 471
Query: 439 MLDLA------PSGKGEILQPELTPNPALE 462
+ L P G I P PNP L+
Sbjct: 472 KMRLIIEQLQLPKG---IYDPSRYPNPDLQ 498
>gi|113913537|gb|ABI48912.1| YKU80 [Saccharomyces pastorianus]
Length = 621
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
S ++ + K YRYG V + S E ++ + L GF D + R+Y + +
Sbjct: 305 SAIISKDSVTKAYRYGADYVVLPSVLVEQTVYETFPGMDLRGFLDREALPRYYLTSESSF 364
Query: 338 FIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 392
+A+ G +A SAL M E KVA+ R V R+ + V + L P + E+ +
Sbjct: 365 IVADTRLGCLSDAMAFSALVDVMLENRKVAVARYVSRKDSE-VTMCALCPVLIEQEDNER 423
Query: 393 -IPDSFYFNVLPFAEDVREFQFPS-FSKFPVSWQP--NEQQQEAADNLV 437
+ S LPFAED R FP ++ S P NE ++ D+L+
Sbjct: 424 KVVRSLISCRLPFAEDERVTDFPKLLNRTTTSGVPLKNETDEDQIDDLM 472
>gi|170084897|ref|XP_001873672.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651224|gb|EDR15464.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 227
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 27/163 (16%)
Query: 9 LLLLDVSPSMHSVL-------PDVEKLCSRL-------------IQKKLIYG-KNHEVGV 47
+ L+D SPSM ++ PD E + L IQ+ + G K + GV
Sbjct: 12 MFLVDTSPSMGTLRTIDLPPGPDGECRTANLTNLEWALQFIKLKIQEMIFNGRKTDQCGV 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
I+FG+EET N + ++ GGYE+V I + + + L + +GD +DA++VG++
Sbjct: 72 IVFGSEETNNIVNEKNGGYENVIEYIPIGQPNAGTLAKIDALQPSSVSGDPIDALIVGIE 131
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR 150
+ + ++TD P++ ED +T+A+
Sbjct: 132 TQANYLSSKKTWTRKVIMVTDGESPIE------VEDWEATVAK 168
>gi|336270558|ref|XP_003350038.1| hypothetical protein SMAC_00927 [Sordaria macrospora k-hell]
gi|111120025|emb|CAJ41424.1| ATP-dependent DNA helicase II, 70 kDa subunit [Sordaria macrospora]
gi|380095429|emb|CCC06902.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 646
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 211/521 (40%), Gaps = 107/521 (20%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM S L K +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIEVSKSMLKPPAATGDKKADKDSALTAALKCAYQIMQQRIIAQPRDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD----------FL 99
GTE+++ G GY H +L D+ V V+ L+ L + D +
Sbjct: 89 GTEKSKFRDDSGNGTGYPHCYLLSDLDVPGAEDVKKLRALVEDDEDEDEIMVPSKEPVIM 148
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------ 147
++ + + + G + L ++TD DP G K+ + S
Sbjct: 149 SNMLFCANQVFTTNAANF-GSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGI 203
Query: 148 ------IARQMVAFGLR--MKNIVVRASLS-----GEPHMR-----VIIENDNLLNIFSK 189
I+R+ F L +I+ R + G P + + N + NI SK
Sbjct: 204 VIELFPISREGKKFDLSKFYDDIIYRDPAAEVGELGGPKTSKAGDGLTLLNSLISNINSK 263
Query: 190 KSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTL 247
++ ++ F + L +TI +G + L+ + + +VY+ GEE+ +
Sbjct: 264 QTPKRSYFSNLPFELAPG--------LTISVKGYIPLNRQTPSRSCYVYE--GEEQAQVV 313
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
+ + +VD+ ++VE E R KGY++G + + E +
Sbjct: 314 Q-------------SETAQVDFAARTVEKT------ELR-KGYKFGGEHICFKPEELAEL 353
Query: 308 KFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
K +K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 354 KQMGKKTLRIIGFKKRSKIPSWASVKKSLFIFPSEEQYVGSTRVFSALWQKLLKDDKVGI 413
Query: 367 VRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 414 AWFVARENAHPVMVAIFPSGNPDDEESNTPYLPAGLWLYPLPFADDVR-----SVDHVTA 468
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P ++ + +++ L L + + P PNP+L+
Sbjct: 469 PARPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQ 505
>gi|149015963|gb|EDL75244.1| X-ray repair complementing defective repair in Chinese hamster
cells 5, isoform CRA_b [Rattus norvegicus]
Length = 228
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPL 133
GKKH+ + TD P
Sbjct: 125 KKFGKKHIEVFTDLSSPF 142
>gi|62822090|gb|AAY14659.1| unknown [Homo sapiens]
Length = 163
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 83/141 (58%), Gaps = 17/141 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD 128
+ + G+ ++ K+H+ + TD
Sbjct: 118 IQHETIGKKFE-KRHIEIFTD 137
>gi|121929599|sp|Q0U5F2.1|KU70_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
Length = 652
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 92/465 (19%), Positives = 182/465 (39%), Gaps = 80/465 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P E K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T +L ++H +L D+ V V+ L+ L + G +
Sbjct: 88 GTEKT--DLKDGDSTFQHCYLLADLDVPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIA 145
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+ +V +D T AR + G
Sbjct: 146 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPV---NVKADKDTAVTRARDLYDLGCTID 201
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P + + + +K TL +S
Sbjct: 202 LFPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKV---AKSGEGITLLKQLISS 258
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKF 260
+ R +F LEL ++I V Y K+ K + DK
Sbjct: 259 INSKATPR----RALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDKPQIVSSS 314
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKL 317
+H +D ++VV + K Y++G + + E +K + + +++
Sbjct: 315 TSH---------MADDTARVVEKTELRKAYKFGGDAITFTPD--EIIKIRQAFGDPIIRI 363
Query: 318 LGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S + + K ++ +E +T SAL + + + K+ +V + R+
Sbjct: 364 IGFKPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAA 423
Query: 377 SVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPS 415
++ ++ E+ N +P + LP+A+D+R+F P+
Sbjct: 424 PILSALIP--AEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPA 466
>gi|336365738|gb|EGN94087.1| hypothetical protein SERLA73DRAFT_63055 [Serpula lacrymans var.
lacrymans S7.3]
Length = 228
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GVI+FG+E+T+N + + GGYEHV + + + L L
Sbjct: 49 IQEMIFNGRKTDQCGVIVFGSEDTDNVINDKSGGYEHVSEYIPVAQPNAGTLTKLDALSP 108
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
GD +DA++VG++ + + + L+TD P++ D ++ +++
Sbjct: 109 SEVTGDPVDALIVGIETQDQYLSSKRTWTRKIVLLTDGENPIEIEDWEATVQKMDSLSIA 168
Query: 152 MVAFGL 157
+ G+
Sbjct: 169 LTVVGV 174
>gi|330805479|ref|XP_003290709.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
gi|325079131|gb|EGC32746.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
Length = 528
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 180/449 (40%), Gaps = 64/449 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
R+ ++ L+D S SM E K + I K+I ++ +GV + T++ +N
Sbjct: 4 RDCIVFLIDASKSMFDQNDSGEVPFYNAIKCLIQTITDKIITSESDLIGVCFYNTDKKKN 63
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-------GTCAGDF--LDAIVVGVDM 108
+ +E++ VL ++ + D ++ L+ + + G GDF DA+ M
Sbjct: 64 -----INDFENIYVLSELDIPDPKIILQLEDILENDFSKSFGHFNGDFPLCDALWTCSTM 118
Query: 109 L-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 163
+ K + L T+ +P+ + ++ TI R L ++ +
Sbjct: 119 FSNMKQTSAQSQQQNNFKRIFLFTNQ----DNPNQYNEGNRNLTIQRAKDLSELNIQIEL 174
Query: 164 VRASLSGEP------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL-RGARKTRDISPV 216
+ GE + +++ D+ I + +A T F + + L R K R + +
Sbjct: 175 FSMNKPGEQFDFTLFYQNILVFGDDDQYIDPNQFNASTKFSELLSKLKRKEFKKRSLGKI 234
Query: 217 TIFRG---DLELSEKMKIKVWVYK--KTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 271
++ G D + ++ I +Y T + P L P T+ VK
Sbjct: 235 PLYIGSSSDNNNNNQIVISTQMYNLFSTARKSSPVLLD-----PKTNLPVKQLVK----- 284
Query: 272 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
E + P Q + + YG + V S E +++K + LLGF S I ++
Sbjct: 285 NVCEATGATLLPSQIKQSFYYGGEPVIFSKDELDSIKSIDRIGLTLLGFKPTSAIKAYHS 344
Query: 332 MKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 390
+K + +F E +TV ++L M + +KVAI R R G +V +L P
Sbjct: 345 IKHSSFIFPDEQMIKGSTVTFNSLVEQMLKSDKVAICRFTSRSGSAPRMVALL-PQEEIL 403
Query: 391 INIPDSF----------YFNVLPFAEDVR 409
IN DSF + LP+A+D+R
Sbjct: 404 INEFDSFGKIQFRPRGMHIIYLPYADDIR 432
>gi|74218207|dbj|BAB26920.3| unnamed protein product [Mus musculus]
Length = 284
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 R 175
R
Sbjct: 178 R 178
>gi|367003563|ref|XP_003686515.1| hypothetical protein TPHA_0G02460 [Tetrapisispora phaffii CBS 4417]
gi|357524816|emb|CCE64081.1| hypothetical protein TPHA_0G02460 [Tetrapisispora phaffii CBS 4417]
Length = 626
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI- 339
V P K +RYG V + + + + ++ + GF + +++ R Y++ + FI
Sbjct: 317 VSPNSVSKAFRYGSDYVILPAVINDQRTMNNKANIDIRGFMNETSLPR-YFLNSESKFIF 375
Query: 340 --AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--KINIPD 395
+ G+ ++ AL + E K+AIVR V + + V + L P VS+ NI
Sbjct: 376 FDSRNGSKSDVYSMYALVDVLMENKKIAIVRYVQKHNGE-VEMCALYPMVSKISDRNIVR 434
Query: 396 SFYFNVLPFAEDVREFQFPSF-SKFPVSWQPNEQQQEAADNLVKML 440
F N LPFAED R FP ++ S + E+ +E D + K++
Sbjct: 435 YFVLNRLPFAEDERVSDFPKLVNRLSTSGKLIEENKEEEDKIDKLM 480
>gi|169619627|ref|XP_001803226.1| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
gi|160703865|gb|EAT79812.2| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
Length = 661
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 92/465 (19%), Positives = 182/465 (39%), Gaps = 80/465 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P E K +L+Q+++I N +G++LF
Sbjct: 37 KDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 96
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T +L ++H +L D+ V V+ L+ L + G +
Sbjct: 97 GTEKT--DLKDGDSTFQHCYLLADLDVPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIA 154
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+ +V +D T AR + G
Sbjct: 155 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPV---NVKADKDTAVTRARDLYDLGCTID 210
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P + + + +K TL +S
Sbjct: 211 LFPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKV---AKSGEGITLLKQLISS 267
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKF 260
+ R +F LEL ++I V Y K+ K + DK
Sbjct: 268 INSKATPR----RALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDKPQIVSSS 323
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKL 317
+H +D ++VV + K Y++G + + E +K + + +++
Sbjct: 324 TSH---------MADDTARVVEKTELRKAYKFGGDAITFTPD--EIIKIRQAFGDPIIRI 372
Query: 318 LGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S + + K ++ +E +T SAL + + + K+ +V + R+
Sbjct: 373 IGFKPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAA 432
Query: 377 SVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPS 415
++ ++ E+ N +P + LP+A+D+R+F P+
Sbjct: 433 PILSALIP--AEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPA 475
>gi|358057495|dbj|GAA96493.1| hypothetical protein E5Q_03161 [Mixia osmundae IAM 14324]
Length = 889
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVK----FKPEKSVKLLGFTDASNILRHYYMKD 334
+ V PE +K Y+YG +VP+ A+++ +K F+P ++++ FT AS I + D
Sbjct: 405 REVRPEDLVKAYKYGATLVPL--ADFDEIKTDLNFQP--GLQVISFTKAS-IALETLLGD 459
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS----VVVGVLTPNVSEK 390
V A + + V SA AM E VA+ R V ++G +G L P + +
Sbjct: 460 VYYVHAHQDSPPSQVMFSAFIHAMHERQAVALTRYVGKRGAAGKAPDAKLGYLIPRIGKH 519
Query: 391 INIPDSFYFNV-LPFAEDVREFQFPSFSKF 419
N + V LPF+ED+R ++ S +
Sbjct: 520 WNEDYQYCIWVQLPFSEDIRMYEMDSIEYY 549
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 5 REALLLLLDVSPSMHSV--LPD---------VEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
R L L+D S SM + P+ + L +R K L K +GV LFG++
Sbjct: 10 RNVTLFLVDCSSSMANKHDFPEGRISSRDYAIRFLAARFTSKILKGLKTEHLGVTLFGSD 69
Query: 54 ETENELTKE-VGGYEHVKVLQDIKVVDGHLVQS--LKHLPQGTCAGDFLDAIVVGVDMLI 110
+T N L E V GYE+++ I + L S L+ + GD L A+ + L
Sbjct: 70 KTSNVLADENVEGYENIRT-NFIPISQPTLESSERLQRIRTSDMCGDILSALACALYQLQ 128
Query: 111 KKYGETYKG-KKHLCLITDA 129
+ G++ +K L L+TDA
Sbjct: 129 SELGKSRVAYRKTLVLVTDA 148
>gi|195115270|ref|XP_002002187.1| GI17244 [Drosophila mojavensis]
gi|193912762|gb|EDW11629.1| GI17244 [Drosophila mojavensis]
Length = 700
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 190/474 (40%), Gaps = 57/474 (12%)
Query: 1 MARTREALLLLLDV--SPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
MA +E L+++LDV + L V K + +I+ K++ K V +L G EE+ NE
Sbjct: 1 MASNKECLIIVLDVRNCAAEEFKLKSV-KCVAEIIKDKIVSDKKDYVSFVLVGCEESNNE 59
Query: 59 L-------TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDAIVVGVDMLI 110
L + V YE+ ++ L++ K + C G++LD + V + ML
Sbjct: 60 LYEADNSVCQNVLQYENTQL-----CTWQLLLRFFKFVNATACDEGEWLDGLDVAIAML- 113
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKE----DQV-STIARQMVAFGLRMKNIV-V 164
+ K + L+ L D + T+ D++ S I + + + NI +
Sbjct: 114 -HSAQPLKCARQRILL------LYDFNFMTQRHDDYDKICSKILHENIELIVGSHNIAYI 166
Query: 165 RASLSGEPHM-------RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ + +P I E +N + S+ + +L K + P
Sbjct: 167 DNAETNQPQAIFQFTRKSNIHELENQKHALQLVSNCNAVLCSFKETLASVFKVSNRRP-W 225
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
++ L + ++ I + E LKK + + V+ E + V
Sbjct: 226 VWNAKLHIGSQISISLQGIIAMKNESHIKLKKV---------WGEDDELVEREERFVIKG 276
Query: 278 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS--VKLLGFTDASNILRHYYMKD 334
++V P PE I GY G VP V+ P + + +GF S+I Y+ D
Sbjct: 277 TEVTPLPEDLIDGYMLGGTPVPYDET---LVELPPAHAPGLHFVGFVKHSSIPDAYFCGD 333
Query: 335 -VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
+ + + + GN+ + + AL RA+ V + ++ + + VL P S K +
Sbjct: 334 SLYMLVHQKGNTSSAQKLDALVRALIAQKCVILCWKIFSVKFNTPRIVVLIPQES-KDDS 392
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
P + Y L + + + FPS + N+ Q +A DNL+ +DL + K
Sbjct: 393 PATLYMQELSYHAQHQFWDFPSLRTEKT--ECNKDQLKAVDNLIDSMDLECTLK 444
>gi|159489188|ref|XP_001702579.1| DNA binding protein [Chlamydomonas reinhardtii]
gi|158280601|gb|EDP06358.1| DNA binding protein [Chlamydomonas reinhardtii]
Length = 1076
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL---TKEVGG 65
+L+LDV P M LP + +L ++ KL++ HEV V+L+GTE T +EL +
Sbjct: 10 VLVLDVGPHMQPYLPLLHRLVFNVLNTKLLFKPLHEVAVVLYGTEGTRHELHDPSDAAST 69
Query: 66 YEHVKVLQDIKVV 78
Y HV VL+ ++ V
Sbjct: 70 YPHVTVLRPLQAV 82
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL--RHYYMKDVNLFIAEPGN 344
++GY +G QVVP+ + + K LLGF L RH + + ++ +
Sbjct: 488 VRGYNFGAQVVPVDEVTAATAQLQFAKDFSLLGFAPEPLALVPRHRLVAEPSVVVGADAT 547
Query: 345 SRATVAVSA------LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
+ A +A A L AI R R ++V+ LTP++S ++PD
Sbjct: 548 ATAALAALARAMDAPLVAGGPRPGTGAIARLKNRAAIPALVL--LTPHLSHSPDVPDCLL 605
Query: 399 FNVLPFAEDVREFQFPSF 416
+ LP+ ED+R F FP+F
Sbjct: 606 LSPLPYFEDIRTFFFPTF 623
>gi|112362683|emb|CAL35970.1| HDF2 protein [Saccharomyces kudriavzevii]
gi|401841082|gb|EJT43623.1| YKU80-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 622
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+Y + +K A + +++ Y SV V+ + K YRYG V + S +
Sbjct: 281 EYEIHSEEKNKKANEDEEMESSYTSV-----VISKDSVTKAYRYGADYVVLPSVLVDQTV 335
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 366
++ + + GF D + R+Y + + IA+ G T+A AL M E KVA+
Sbjct: 336 YETFPGLDVRGFLDREALPRYYLTSESSFIIADTRLGCLSDTMAFGALVDVMLENRKVAV 395
Query: 367 VRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYFNVLPFAEDVREFQFPS-FSKF 419
R V ++ + V + L P ++ + + S LPFAED R FP ++
Sbjct: 396 ARYVSKKDSE-VNMCALCPILVEHADMDSETKVVRSLTLCRLPFAEDERVTDFPKLLNRT 454
Query: 420 PVSWQPNEQQ--QEAADNLVKML 440
S P EQ+ + D L++ L
Sbjct: 455 TTSGTPLEQETDEHEIDELMEQL 477
>gi|112362647|emb|CAL35988.1| HDF2 protein [Saccharomyces bayanus]
gi|112362649|emb|CAL35987.1| HDF2 protein [Saccharomyces bayanus]
gi|112362651|emb|CAL35986.1| HDF2 protein [Saccharomyces bayanus]
gi|112362653|emb|CAL35985.1| HDF2 protein [Saccharomyces bayanus]
Length = 621
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R+Y + + +A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYETFPGMDLRGFLDREALPRYYLTSESSFIVADTRLGCL 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG---VLTPNVSEKINIPDSFYFNVL 402
++A SAL M E K+A+ R V R+ + + VL + + S L
Sbjct: 375 SDSMAFSALVDVMLENRKIAVARYVSRKDSEVTMCALCPVLIEQAGSERKVVRSLISCRL 434
Query: 403 PFAEDVREFQFPS-FSKFPVSWQP--NEQQQEAADNLVKML 440
PFAED R FP ++ S P NE ++ D+L++
Sbjct: 435 PFAEDERVTDFPKLLNRTTTSGVPLKNEADEDQIDDLMEQF 475
>gi|112362681|emb|CAL35971.1| HDF2 protein [Saccharomyces kudriavzevii]
Length = 622
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+Y + +K A + +++ Y SV V+ + K YRYG V + S +
Sbjct: 281 EYEIHSEEKNKKANEDEEMESSYTSV-----VISKDSVTKAYRYGADYVVLPSVLVDQTV 335
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 366
++ + + GF D + R+Y + + IA+ G T+A AL M E KVA+
Sbjct: 336 YETFPGLDVRGFLDREALPRYYLTSESSFIIADTRLGCLSDTMAFGALVDVMLENRKVAV 395
Query: 367 VRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYFNVLPFAEDVREFQFPS-FSKF 419
R V ++ + V + L P ++ + + S LPFAED R FP ++
Sbjct: 396 ARYVSKKDSE-VNMCALCPILVEHADMDSETKVVRSLTLCRLPFAEDERVTDFPKLLNRT 454
Query: 420 PVSWQPNEQQ--QEAADNLVKML 440
S P EQ+ + D L++ L
Sbjct: 455 TTSGTPLEQETDEHEIDELMEQL 477
>gi|367045694|ref|XP_003653227.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
gi|347000489|gb|AEO66891.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
Length = 645
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 211/503 (41%), Gaps = 70/503 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKL-------------CS-RLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM P +K C+ + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSKSMLQQPPATDKKKGEKDSAVAAALKCAYQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEETE--NELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFL------- 99
GTE+++ +E G GY H + D+ V V+ LK L +G A + L
Sbjct: 89 GTEKSKFRDEAGGRSGTGYPHCYLFTDLDVPAAEDVKKLKALVEEGEDADEVLVPSNEPA 148
Query: 100 --DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
++ + + + G + L +ITD P D K + A+ + G+
Sbjct: 149 SMANVLFCANQVFTTNAANF-GSRRLFIITDNDSP-HGKDKAAKS-SAAVRAKDLYDLGV 205
Query: 158 RMKNIVVR---ASLSGEPHMRVIIENDNLLNIFS------KKSSAKTLFVDSTTSLRGAR 208
++ + +S II D + S KS ++S S ++
Sbjct: 206 VIELFPISQGGSSFDVSKFYDDIIYRDPAAELGSPDEVKTSKSGDGLSLLNSLISNINSK 265
Query: 209 KTRDISPVTIFRGDL--ELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-V 265
+T P + +L EL+ + I V Y ++ P Y + A E +
Sbjct: 266 QT----PKRAYFSNLPFELAPGITISVKGYMPLHRQQ-PARTCYVWLGGEQAQLAQGETI 320
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
KVD + ++V D S+V K Y++G + + E ++K K ++++GF S+
Sbjct: 321 KVDSDTRTV-DKSEVK------KAYKFGGEYIYFKPEELASLKNLGGKVLRVIGFKPRSS 373
Query: 326 ILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL- 383
I + K + +F +E +T SAL + + + +KV + V RQ ++V ++
Sbjct: 374 IPTWASVKKSIFIFPSEEDYVGSTRVFSALWQKLLDADKVGLAWFVARQNANPIMVAIIP 433
Query: 384 TPNVSEKIN----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+ N E+ + +P + LPFA+DVR + + + P ++ + +V+
Sbjct: 434 SRNPDEETSGTPYLPAGLWLYPLPFADDVRNVELSAPPR------PADELTDKMREIVQN 487
Query: 440 LDLAPSGKGEILQPELTPNPALE 462
L L + + P PNP+L+
Sbjct: 488 LQLPKA----MYNPLKYPNPSLQ 506
>gi|193645803|ref|XP_001952755.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 544
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 174/439 (39%), Gaps = 72/439 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE------KLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
++ ++ L+D S MH+ D LC +++ K + +N ++G++++GT + +
Sbjct: 26 KQHIIFLIDASKPMHNTYNDTTFFATCIALCKKIVLKLIRESRNDKIGILIYGTNDANKK 85
Query: 59 LTKEVG--------GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLI 110
K + + +K L D V+ G L+Q+ G C L V + LI
Sbjct: 86 CPKYINVLSEPIKPNIQLIKKLDD--VLTGKLIQT------GQCPLSPLSDAVWYSNYLI 137
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVAFGLRMKNIVVRASL 168
KK E + + D PD+G + Q R ++ + K I + A+
Sbjct: 138 KKCSENQSCSTIMLITCD-----DQPDIGDSKKQFHLRTRIDDVIKNNIDFKLIPIGATF 192
Query: 169 SGEPHMRVIIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE 227
+ +++N N ++ + S + +D L+ R +S + F ++
Sbjct: 193 NMNLFYEGLLKNFNSISKPINGLESIDDIMLDINDKLKHG---RSVSKIKFF-----INN 244
Query: 228 KMKIKVWVYKKTGEEKFPT---LKKYSDK--APSTDKFATHEVKVDYEYKSVEDPSKVVP 282
I +YK + K P+ L K ++K +T F H ++ Y+
Sbjct: 245 DFYISTALYKFYTKLKMPSKVKLDKRTNKPLTSNTQVFTLHTNELMYK------------ 292
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
+ K + + + E +K KP ++LLGF NI+ Y+ K ++F+
Sbjct: 293 -SDQAKYLELANEKIIFKNEEMTILKNGIIKP--GIRLLGFISKKNIMIFYHFK-TSIFL 348
Query: 340 AEPGN---SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-----NVSEKI 391
P N +T + L E NK R+G + +V +L P N +
Sbjct: 349 -RPNNEVVESSTHMFNTLLECCLEKNKCIKCSLKIRKGGKVNLV-ILIPQAEIMNETGTQ 406
Query: 392 NIPDSFYFNVLPFAEDVRE 410
N P F+ LPF+ V++
Sbjct: 407 NHPSGFHVIFLPFSGCVKK 425
>gi|340054033|emb|CCC48327.1| putative KU80 protein [Trypanosoma vivax Y486]
Length = 617
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
P + A ++ RAM + +VR V+ Q + V+GV P+ E D +F+
Sbjct: 349 PNDLTGAKAFRSIVRAMAQNGLAMVVRYVYIQ-DANPVLGVCVPSSDEG---RDVLFFSA 404
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA--DNLVKMLDLAPSGKGEILQPELTPNP 459
LPFAEDVR +FP + VS + ++E A ++V + + P ++L P T NP
Sbjct: 405 LPFAEDVRHLKFPDYDSMGVSVGESVMEEEEALVASVVDGMTVGP----DVLNPHQTFNP 460
Query: 460 ALEVL 464
L+ L
Sbjct: 461 FLQQL 465
>gi|397576290|gb|EJK50171.1| hypothetical protein THAOC_30890 [Thalassiosira oceanica]
Length = 584
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYY 331
+D + VP +R YRYG +VP+ + + +K F +K +++G+ D ++++
Sbjct: 308 KDSAVEVPIAKRTNAYRYGSDLVPVGKMDEDGLKAPFFSDKKLTEVMGYLDKNDVVNSNL 367
Query: 332 MKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 390
+ I S R A++AL++A++E +KVA + + ++ + +VG L P + K
Sbjct: 368 LAGPTYAIFGGDKSVRGRTAIAALSQALEETDKVAFCK-LKKEKKSEPIVGALFPKIQGK 426
Query: 391 INIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE-----QQQEAADNLVKMLDLA 443
+ S N + E + SK QP E ++ +A D ++ + +A
Sbjct: 427 DDGAGSSQQNGGRYLEFIALPYVGDLSKMVSRRQPEEYRGTVEEDKACDEMIDAMMIA 484
>gi|145349578|ref|XP_001419207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579438|gb|ABO97500.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 341
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
L+GF DA I R +K + F+A G + A L RA E NKVAI C + +
Sbjct: 35 LVGFVDAKTITRDLCLKKSH-FVA--GEEKGCAAFQGLLRACVEENKVAI--CALSRSTR 89
Query: 377 SVVVGV-LTPNVS-------------EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
S + V L P ++ ++ P+ F+ LPF +D R + S+
Sbjct: 90 SALRYVALLPQLAPSADEIAAADDAVSRLEPPEGFHVFYLPFRDDTRHPERAVASEKAPL 149
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE----VLNICG 468
+ NE Q AA +++ + L P+ TPNPAL+ VL +C
Sbjct: 150 PRANEAQITAARSVIDAIRLTQ------WHPKQTPNPALQTHYRVLEMCA 193
>gi|320582600|gb|EFW96817.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Ogataea
parapolymorpha DL-1]
Length = 656
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
+TDK+ T +E S + + + + YRYG VP++S+ + + +
Sbjct: 277 TTDKYVT------FEPDSQSTEPRFLDATEVQEAYRYGSSTVPVTSSLKQLLNINTYAGL 330
Query: 316 KLLGFTDASNILRHYYMKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQG 374
+L F +I Y+ + + + +S R + LA+A+ E + VAIVR V R
Sbjct: 331 DILQFVRRKSIPPWYFHGEAEILLNNQNSSVRDQFGFNMLAQALLEHDLVAIVRYVKRNA 390
Query: 375 QQSVVVG-----VLTPNVSEKINI--------------PDSFYFNV--LPFAEDVREFQF 413
+ + VLT K + PD + F++ LPFAED R F
Sbjct: 391 GTARLAAMSPCIVLTDATKYKHELQTGDKRKLEEMDGEPDHYGFSLVALPFAEDERLSTF 450
Query: 414 PSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
S S P+EQ + LV ++DL G G + +PE
Sbjct: 451 AKLSGVAESNGGDNLGSENFPSEQMLQEMGQLVDLMDL--DGPGSLKKPE 498
>gi|398404460|ref|XP_003853696.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
gi|339473579|gb|EGP88672.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
Length = 644
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 102/517 (19%), Positives = 205/517 (39%), Gaps = 83/517 (16%)
Query: 4 TREALLLLLDVSPSMHS-------------VLPDVEKL-CS-RLIQKKLIYGKNHEVGVI 48
T++A+L +DVS SM + + P V L C+ L+Q+++I + +G++
Sbjct: 23 TKDAVLFAIDVSESMLAKPSEADPKKPDTGLSPTVAALKCAYSLMQQRIISNPSDMMGIL 82
Query: 49 LFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSLKHLP----------QGT 93
LFGTE+++ + E G Y H +L D+ V V+ L+ L Q +
Sbjct: 83 LFGTEKSKFQEGDEKTGSGALQYPHCYLLTDLDVPAAADVKLLRDLVDDEEESAAILQAS 142
Query: 94 CAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ ++ + + + ++ L ++TD P P+ + + A+ +
Sbjct: 143 PEEVSMANVLFCANQVFTTKAPNFNSRR-LFIVTDNDYP--HPNSRDSRNSAAVRAKDLY 199
Query: 154 AFGLRMK-------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
G+ ++ N +V +S +P + D I + S+AK
Sbjct: 200 DLGVTIELFPISHPDRDYTFDRSKFYNDIVYSSTPADPDAPAPLTAD----IKAASSTAK 255
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ SL + +R +F LE+ +I + + + + P Y
Sbjct: 256 D-GISLLQSLISSVNSRSAPRRALFSSVPLEIGPGFRIGIKGFLIL-KRQVPKRSTYVYV 313
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P ++K ++ V ED ++ V + + +++G + V + E A++ +
Sbjct: 314 PPDSEK---AQLAVGSSTLVAEDTARTVEKIEIRRAFKFGGETVSFTDEELAAIQNYGDP 370
Query: 314 SVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
++++GF D + +K+ L+ +E +T SAL + + A+ + R
Sbjct: 371 IIRIIGFKDLELLPAWAAIKESTFLYPSEDSFIGSTRVFSALHQTLLRKRYFALAWYIPR 430
Query: 373 QGQQSVVVGVLTP----NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 428
+ + +VG+L N S ++P + LPFA+D+R P
Sbjct: 431 RNAKPRLVGLLPGAEERNASGDQDMPPGLWVRPLPFADDIRS-------------APETS 477
Query: 429 QQEAADNLVKMLDLAPSG---KGEILQPELTPNPALE 462
A DN+V + G + P+ PNP+L+
Sbjct: 478 LVRAPDNVVDKMRTVLQNLQLPGAVYDPKKYPNPSLQ 514
>gi|254574166|ref|XP_002494192.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in
telomere length maintenance [Komagataella pastoris
GS115]
gi|238033991|emb|CAY72013.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in
telomere length maintenance [Komagataella pastoris
GS115]
Length = 696
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KK D+ D T ++++ YE V++ E +K YRYG ++P++S E +
Sbjct: 328 KKEDDREEKED---TDDIEIKYEEIPVDN-------ESLMKTYRYGTSLIPLTSTFNELL 377
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K+ + + GF + ++M + L I +R VA +A+ +++ +++ V I+
Sbjct: 378 KYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEA-TRDRVAFAAMCQSLLDVDSVGII 436
Query: 368 RCVWRQGQQSVVVGVLTP 385
R R V +G L P
Sbjct: 437 RYTLR-SSSGVFMGALIP 453
>gi|328353988|emb|CCA40385.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 608
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KK D+ D T ++++ YE V++ E +K YRYG ++P++S E +
Sbjct: 240 KKEDDREEKED---TDDIEIKYEEIPVDN-------ESLMKTYRYGTSLIPLTSTFNELL 289
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K+ + + GF + ++M + L I +R VA +A+ +++ +++ V I+
Sbjct: 290 KYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEA-TRDRVAFAAMCQSLLDVDSVGII 348
Query: 368 RCVWRQGQQSVVVGVLTP 385
R R V +G L P
Sbjct: 349 RYTLR-SSSGVFMGALIP 365
>gi|112362685|emb|CAL35969.1| HDF2 protein [Saccharomyces kudriavzevii]
Length = 622
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
S V+ + K YRYG V + S + ++ + + GF D + R+Y + +
Sbjct: 305 SVVISKDSVTKAYRYGADYVVLPSVLVDQTVYETFPGLDVRGFLDREALPRYYLTSESSF 364
Query: 338 FIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG-----VLTPNVSEK 390
IA+ G T+A AL M E KVA+ R V ++ + + V P + +
Sbjct: 365 IIADTRLGCLSDTMAFGALVDVMLENRKVAVARYVSKKDSEVNMCALCPILVEHPGMDSE 424
Query: 391 INIPDSFYFNVLPFAEDVREFQFPSF 416
+ S LPFAED R FP
Sbjct: 425 TKVVRSLTLCRLPFAEDERVTDFPKL 450
>gi|365989646|ref|XP_003671653.1| hypothetical protein NDAI_0H02360 [Naumovozyma dairenensis CBS 421]
gi|343770426|emb|CCD26410.1| hypothetical protein NDAI_0H02360 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI---AEPGN 344
K YRYG V + + E + ++ S+ + GF D ++ R Y + ++FI G+
Sbjct: 330 KAYRYGADYVVLPPSLQEQLTYETWPSLDIRGFLDKDSLPR-YLLTSESIFIMPDTRLGS 388
Query: 345 SRATVAVSALARAMKEMNKVAIVRCV---WRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
V + L + +KVAI R V + + Q V+V +L + K I +F N
Sbjct: 389 QADNVTFNVLVDVLLGQDKVAIARYVPKYYSEVQMCVLVPLLVLHEDGKTLI-RAFVLNR 447
Query: 402 LPFAEDVREFQFPSFSKF-PVSWQPNEQQQE 431
LPFAED R FP +K S QP ++ E
Sbjct: 448 LPFAEDERVADFPRLTKRKTTSGQPIPEKDE 478
>gi|112362693|emb|CAL35965.1| HDF2 protein [Saccharomyces mikatae]
Length = 570
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 291 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 350
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 351 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 409
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 458
LPFAED R FP ++ S P E++ A + ++++ PE++P+
Sbjct: 410 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKET-AEHEIDELMEQFVDAMDTDDLPEISPD 468
Query: 459 PALEVLN 465
+ +N
Sbjct: 469 NYFQPIN 475
>gi|444317158|ref|XP_004179236.1| hypothetical protein TBLA_0B09020 [Tetrapisispora blattae CBS 6284]
gi|387512276|emb|CCH59717.1| hypothetical protein TBLA_0B09020 [Tetrapisispora blattae CBS 6284]
Length = 681
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
+YK+V SK + K YRYG V + + + + F + + GF D ++ RH
Sbjct: 336 DYKTVTVSSKSIS-----KVYRYGTDYVVLPTTLTDNLSFNTYPGLDITGFMDEESLPRH 390
Query: 330 YYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-- 385
Y + + +A+ G++ ++ L + E K+AI R V + + +V +L P
Sbjct: 391 YLISESTFIVADSRAGSTADMMSFEILVDVLYENKKIAIARYVQKNNTNAQMV-MLCPVL 449
Query: 386 --------------------NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
+ +E++N+ + LPFAED R +FP S + +
Sbjct: 450 VDHSDILSEQDIQKYRSIHDDDNEEVNMR-GLILSRLPFAEDERVSEFPKLSNRHMKNEK 508
Query: 426 NEQQQEAADNLV 437
++ + E D+L+
Sbjct: 509 SKLEAEEIDSLM 520
>gi|363749599|ref|XP_003645017.1| hypothetical protein Ecym_2476 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888650|gb|AET38200.1| Hypothetical protein Ecym_2476 [Eremothecium cymbalariae
DBVPG#7215]
Length = 611
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 105/274 (38%), Gaps = 58/274 (21%)
Query: 211 RDISPVTIFRGDLELSEKMK-------------IKVWVY--------------KKTGEEK 243
R I PV +F+G L L K I V Y +KT +
Sbjct: 200 RPIKPVRVFQGQLRLGADFKNLESCQDDPYCMCINVEGYPATKAVTSLSRKQVQKTEDGS 259
Query: 244 FPTLKKYSDKAPSTDKFATHE--VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
+ LK S ++ HE K D EY+++ V + +K +RYG + +
Sbjct: 260 YIPLK-------SVVEYEIHEPSEKEDQEYEAI-----TVSKDHIVKAFRYGADYISLPD 307
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMK 359
++ + + GF D N+ R Y + IA+ G+ +A SAL AM
Sbjct: 308 VLASERIYQTTPGLDIRGFIDLFNVPRQYLCGESVYIIADTREGSEADFMAFSALVDAMI 367
Query: 360 EMNKVAIVRCVWRQGQ--QSVVVGVLTPNVSEKINIPD--------SFYFNVLPFAEDVR 409
K+AI R V + Q VV+ L + K D + LPFAED R
Sbjct: 368 TSKKLAIARYVQKNNSEVQMVVLCPLLVGSNLKKRTSDNPEAEPKRALVLCRLPFAEDER 427
Query: 410 EFQFPSFS-KFPVSWQPNEQQQEAADNLVKMLDL 442
F F+ K+P +E D LV ++D+
Sbjct: 428 ACDFLPFTNKYP----KDEDMDAKMDQLVDLMDM 457
>gi|389749569|gb|EIM90740.1| Ku DNA-binding complex Ku70 subunit [Stereum hirsutum FP-91666 SS1]
Length = 648
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 31/145 (21%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKLLGFTDASNIL-----RH 329
++VVPP R+ +AE E KF+ E S+KLLGF D +L +H
Sbjct: 355 TRVVPPNTRV-----------FYTAE-EIKKFRSLGLEPSIKLLGFKDKDQLLFEDNIKH 402
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
Y ++ E + + VSAL ++M + +K+ +V ++R+G + +L E
Sbjct: 403 SYF----IYPDEMAYTGSKRTVSALIKSMAKKDKIGLVLALFRRGSSPIFCAMLAQK--E 456
Query: 390 KINI-----PDSFYFNVLPFAEDVR 409
KI P F+ LPFA+D+R
Sbjct: 457 KIEAGGWREPGGFHLIPLPFADDIR 481
>gi|112362691|emb|CAL35966.1| HDF2 protein [Saccharomyces mikatae]
Length = 595
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 314 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 373
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 374 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 432
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 458
LPFAED R FP ++ S P E++ A + ++++ PE++P+
Sbjct: 433 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKET-AEHEIDELMERFVDAMDTDDLPEISPD 491
Query: 459 PALEVLN 465
+ +N
Sbjct: 492 NYFQPIN 498
>gi|124518454|gb|ABN13872.1| Ku seventy [Aspergillus niger]
gi|134082330|emb|CAK42345.1| unnamed protein product [Aspergillus niger]
Length = 648
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 107/517 (20%), Positives = 205/517 (39%), Gaps = 97/517 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF-------- 98
GT+ + E+E ++ Y + + D+ V H V+ L+ L GD
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHEVKGLRALVDDE--GDSREVLSPAK 145
Query: 99 ----LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 154
+ ++ + + + ++ L +ITD P D T + A+ +
Sbjct: 146 EQVSMANVLFCANQIFTSRAPNFLSRR-LFIITDNDNPHGDDK--TLRSAATVRAKDLYD 202
Query: 155 FGLRM------------KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
G+ + KN SL +P +++D SK ++A +
Sbjct: 203 LGVTIELFPISRPEHEFKNSKFYDSLPSDPEAPAYLQSD------SKAATATGDGISLLN 256
Query: 203 SLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
+L + +R + T F LEL +I V Y L++ +AP+ + F
Sbjct: 257 TLLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYI--------LLRR---QAPARNSFI 305
Query: 262 THE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
V S +D + V + K Y++G V S E +A++ E ++
Sbjct: 306 WLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPVIR 365
Query: 317 LLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
++GF + + ++H Y ++ +E ++ SAL + + K+A+V +
Sbjct: 366 VIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQTLLRSKKMALVWFIA 421
Query: 372 RQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
R+G V+ ++ EK++ P + LPFA+D+R+ + + P
Sbjct: 422 RKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIRQNPETTLNVAP----- 474
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
E + +V+ L L P G + +P PNP+L+
Sbjct: 475 -ESLIDQMRVIVQQLQL-PKG---VYEPLKYPNPSLQ 506
>gi|112362689|emb|CAL35967.1| HDF2 protein [Saccharomyces mikatae]
Length = 598
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 314 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 373
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 374 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 432
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 458
LPFAED R FP ++ S P E++ A + ++++ PE++P+
Sbjct: 433 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKET-AEHEIDELMEQFVDAMDTDDLPEISPD 491
Query: 459 PALEVLN 465
+ +N
Sbjct: 492 NYFQPIN 498
>gi|112362687|emb|CAL35968.1| HDF2 protein [Saccharomyces mikatae]
Length = 600
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 304 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 458
LPFAED R FP ++ S P E++ A + ++++ PE++P+
Sbjct: 423 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKET-AEHEIDELMEQFVDAMDTDDLPEISPD 481
Query: 459 PALEVLN 465
+ +N
Sbjct: 482 NYFQPIN 488
>gi|448083115|ref|XP_004195314.1| Piso0_005866 [Millerozyma farinosa CBS 7064]
gi|359376736|emb|CCE87318.1| Piso0_005866 [Millerozyma farinosa CBS 7064]
Length = 708
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/535 (19%), Positives = 215/535 (40%), Gaps = 91/535 (17%)
Query: 11 LLDVSPSMHSVLPDVEK---------LCSRLIQKKLIYGKNHEVGVILFGTEETENELTK 61
++D+SPSM +K L LI K + K V VI ++ T+N
Sbjct: 10 VVDLSPSMGQTRNGRDKSDLDYALIPLYDNLISKTMKGLKTDLVTVIACHSKSTKNHFV- 68
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCA------GDFLDAIVVGVDMLIKKYGE 115
+ G + +V+V+ + K D ++ LK + + GD ++++VGV +L + E
Sbjct: 69 DSGNFSNVEVILEKKAPDYDDLKLLKKVLVANTSDVKEDEGDIFESMLVGVGLL--RETE 126
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMR 175
YK K+++ +IT++ +G+ + +++ +++ + L++ +V+ L
Sbjct: 127 KYKFKRNIVVITNSASK-----IGSFQSELAVASKKAIN-ELQIDILVMNLDLHHSDDWL 180
Query: 176 VIIENDNLLNIFSKKSSAKTLFV-DSTTSLRGARKTRDISPVTIFRGDLEL----SEK-- 228
+ + ++ + + + V D + R I P+ F+G L +EK
Sbjct: 181 KLQNEKDWMSALAGYDKGRLVDVKDVINQMEHYPTMRKIRPIQYFKGPLRFGRAGAEKCG 240
Query: 229 ------------MKIKVWVYKKTGEEKFPTLKKY-------------------------- 250
++I V V+ EK P+L +Y
Sbjct: 241 STVPSNESDETALQIGVQVFPGLKAEKSPSLHQYLYDTKNKALSKIKNRVKYTINKHSDD 300
Query: 251 ----SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQR--IKGYRYGP-QVVPISSAE 303
SD +T K+ + + ++ V Q I G++Y +V +
Sbjct: 301 NGDVSDSQGNTMKYVKDQGGAQGDSGDEQENDGKVEINQNDIIDGFKYSNYDLVAVDDDL 360
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAV-SALARAMKEMN 362
K K ++ + ++G N+ Y + + + S V + +A +++ E++
Sbjct: 361 ANYAKLKCDEGMDIIGIMKNGNLPYTYLIGETYYVLPSLDESYINVLMFNAFCQSLIELD 420
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
AIVR V ++ ++ + V L P + + I I SF+ LP+ ED + +FPS S
Sbjct: 421 SCAIVRYVPKRNEE-IQVSALLPRKILVDGIYIY-SFFLCRLPYKEDEKVGRFPSLSSVK 478
Query: 421 VSW----------QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
+ + N Q++ +++ D+ S + IL +L +P + +N
Sbjct: 479 ATSGRLYTNKPEDEGNGQEETGQADILPDSDMNKSMEAFILSKDLDKHPQGKAVN 533
>gi|340505600|gb|EGR31916.1| ku70 ku80 beta-barrel domain protein [Ichthyophthirius multifiliis]
Length = 302
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 29/281 (10%)
Query: 41 KNHEVGVILFGTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
K HEVG+ILFG +++ N + G + L+++ ++ + + GD
Sbjct: 5 KQHEVGLILFGLDQSLQQGNTMYIRQMGKPDMDFLKNVMELESYS-------ENKSEGGD 57
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR-----QM 152
DA+ + + I +Y + K +K + + T A C D + ED VS I + +
Sbjct: 58 IFDALEQSL-ITIDEYVKKKKYEKKIYVFT-AGCGKTDYNSQQLEDLVSKIQQVNAKINI 115
Query: 153 VAFGLRMKNI---------VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
+AF K + + + + +V N LL ++ ++ F S+ +
Sbjct: 116 IAFDFLKKYNPENEDLDLELTKLNEDDDTQTKVQNLNQKLLLAIKREIPSQVQFYPSSIA 175
Query: 204 L--RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
L + +++ +P +RG E+S +K + +Y KT E+K P LK+YS
Sbjct: 176 LLIQKQFRSKGYAPRVKYRGTFEISNFLKFDIQMYTKTSEDKLPGLKQYSQTVEFDKNEK 235
Query: 262 THEVKVDYEYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISS 301
+ ++ + EDP+ + V E K Y YG Q+VP+S+
Sbjct: 236 SGLIEKEVLRYVQEDPNMQPVDKENVGKAYHYGKQLVPLSN 276
>gi|402589545|gb|EJW83477.1| hypothetical protein WUBG_05614 [Wuchereria bancrofti]
Length = 386
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 151/370 (40%), Gaps = 50/370 (13%)
Query: 2 ARTREALLLLLDVSPSMH------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEET 55
A E ++L+DV +M + + + +I +K+ + ++LFG+E T
Sbjct: 14 AARHECTVILIDVGANMSREGVETTDMQLAKDTVEWIITRKIFTESIDKFTLMLFGSEVT 73
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDML---IKK 112
+N +T + + + + +Q K+ + + + P + GDFL A++ +D + ++
Sbjct: 74 QNPITTDENIFFYEEEMQQAKIDWLRFIDN-EIKPSKSTNGDFLAALIAALDYMRNHLEN 132
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
Y E+ +++ L+T+ L D E+ V I M A + + +P
Sbjct: 133 YPESNITVRNILLVTN----LGGFDENVDEECVGAIINGMKALEINFSVVGPSFEKLSKP 188
Query: 173 HMRVIIENDNLLNIFSKKSS---------AKTLFVDSTTSLRGARKT---------RDIS 214
+I ++ + + K S+ A+ + D T G + R +
Sbjct: 189 KDEIISSEESAIKLEGKLSNTMQSFRMEPAERILTDILTQTGGVIYSFSEALPVLQRFVP 248
Query: 215 PVTIFRGD---LELSEKMKIKVWVYKKTGEEKFP-TLKKYS-------------DKAPST 257
RG LEL K+ + +YKK F +KY+ +K
Sbjct: 249 RKVKVRGQKFYLELGIDFKLPLQMYKKIQPTDFKLATQKYASITDVQLKRKTIYEKCVKD 308
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVK 316
+K + D + PS + E+ IKGY++G +VP + + + +KPE + +K
Sbjct: 309 EKVDDGDDNADRVGNLSQGPSSKISKEETIKGYKFGTTIVPYNEEDQKEYGWKPENRCLK 368
Query: 317 LLGFTDASNI 326
L+ FT S +
Sbjct: 369 LIQFTKRSQV 378
>gi|50291883|ref|XP_448374.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527686|emb|CAG61335.1| unnamed protein product [Candida glabrata]
Length = 615
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
P V E K YRYG V + S+ + + ++ + + GF + S++ RH ++ +
Sbjct: 310 PPITVARESITKAYRYGTDYVVLPSSLEDQLVYQTYAGLDIRGFMNMSDMHRH-FLTSES 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD- 395
+F+ +S + SAL AM +++K+AI R V + V + +L P + EK N
Sbjct: 369 VFVVSSSSSADQITFSALIDAMIQIDKIAIGRYVPK-NNSDVQMCMLYPMILEKENGTHV 427
Query: 396 -SFYFNVLPFAEDVREFQFPSFSK 418
+ N LPF ED R FP ++
Sbjct: 428 RTLILNRLPFTEDERIAIFPRLTR 451
>gi|112362703|emb|CAL35960.1| HDF2 protein [Saccharomyces paradoxus]
Length = 593
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 291 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 350
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+AI R V ++ + V + L P N++ + + S
Sbjct: 351 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 409
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 410 CRLPFAEDERVTDFPKL 426
>gi|388581870|gb|EIM22177.1| SPOC domain-like protein [Wallemia sebi CBS 633.66]
Length = 605
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 24/230 (10%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
+S+++ IKV K G+ LK S +A + K +T +V + K V
Sbjct: 146 FNISDEISIKVKYQKAVGKATKLPLK--SLRADNNSKVSTSQVHRLGDSK--------VD 195
Query: 283 PEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
I+ Y YG +VP +E V+F E + L AS R + + + A+
Sbjct: 196 SHNLIRAYHYGSILVPRPDESEGGFVEFTSEAGIDFLSTFPASTFKRDMVIGEPSFIYAD 255
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
+ + +A+S+ A+ + +A+VR R + +G+ P ++ + + +
Sbjct: 256 QSDGSSGLALSSFINALDKNGLIALVRYA-RTKDEKPYLGLCLPIINGQT---EYLQYLR 311
Query: 402 LPFAEDVREFQFPSFSKF------PVS---WQPNEQQQEAADNLVKMLDL 442
+PFA+ +R + FPS + P+ + P ++ A DN V +DL
Sbjct: 312 IPFADQMRNYSFPSLERVVTKSGEPLQNHKYLPTDKMCLAMDNFVNSMDL 361
>gi|112362701|emb|CAL35961.1| HDF2 protein [Saccharomyces paradoxus]
Length = 611
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+AI R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|358063676|ref|ZP_09150282.1| Ku protein [Clostridium hathewayi WAL-18680]
gi|356698111|gb|EHI59665.1| Ku protein [Clostridium hathewayi WAL-18680]
Length = 271
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+KG+ + P + V ++ A++E K + +K++++L FTD +NI Y+ K + + G+
Sbjct: 61 VKGFEFAPGEYVTMTDADFEKAKTEKDKTIQILHFTDIANIRPIYFDKTYHAVVEAGGDK 120
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 405
A L RAM E KVAI + V Q ++ + L P +EK L FA
Sbjct: 121 ----AYELLRRAMLEEKKVAIAKTVMGQSEKLL---CLVP--TEK-----GILVETLFFA 166
Query: 406 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
++V+E K V + N+ + + A L+ +D
Sbjct: 167 DEVKE-----IPKEAVHQELNQPELDMAKMLIGSMD 197
>gi|160934662|ref|ZP_02082048.1| hypothetical protein CLOLEP_03535 [Clostridium leptum DSM 753]
gi|156866115|gb|EDO59487.1| Ku protein [Clostridium leptum DSM 753]
Length = 269
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 31/178 (17%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+KG+ Y + V ++ ++E +K + ++S+++L FTD S+I YY K + + E G
Sbjct: 61 VKGFEYDKDKYVIVTDDDFEKIKTEKDRSIQILHFTDLSSIRPIYYDKTYHA-VPETGGD 119
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 405
+ A L +AMK+ NK+A+ + V GQ+ ++ V+ + D L +A
Sbjct: 120 K---AFELLRQAMKQENKIAVAKTVM--GQKETLLAVIPTD--------DGILIETLFYA 166
Query: 406 EDV----REFQFPSFSKFPVS------------WQPNEQQQEAADNLVKMLDLAPSGK 447
+++ +E+ P+ S+ ++ +QP + E + L +++ +GK
Sbjct: 167 DEIKELPKEYSHPAVSEAELAMAKTLINSMNQEFQPELYKDEYQERLKALIEQKIAGK 224
>gi|112362699|emb|CAL35962.1| HDF2 protein [Saccharomyces paradoxus]
Length = 610
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 308 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 367
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+AI R V ++ + V + L P N++ + + S
Sbjct: 368 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 426
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 427 CRLPFAEDERVTDFPKL 443
>gi|19075945|ref|NP_588445.1| Ku domain protein Pku70 [Schizosaccharomyces pombe 972h-]
gi|74582874|sp|O94395.1|KU70_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|4008550|emb|CAA22471.1| Ku domain protein Pku70 [Schizosaccharomyces pombe]
Length = 607
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/493 (19%), Positives = 196/493 (39%), Gaps = 87/493 (17%)
Query: 7 ALLLLLDVSPSMHSVLPD-------VEKLCS-RLIQKKLIYGKNHEVGVILFGTEETENE 58
A+L +++VSPSM + + + +C+ +L +++I + +GV+L+GTE +
Sbjct: 19 AILFVIEVSPSMLDPVDEFTPSSLQMALICAYQLAAQRVITNPSDIMGVLLYGTESS--- 75
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG---------TCAGDF-LDAIVVGVDM 108
G + + +L DI D ++SL+ + C+ L +++ +
Sbjct: 76 ----TGRFANQMMLLDIDPPDAERIKSLQSFEKDFQFSKEKFKPCSCQVSLSSVLYHCSV 131
Query: 109 LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV---- 164
+ E ++ K L LITD P D T+ D + A+ + +++ + +
Sbjct: 132 IFTTKAENFE--KRLFLITDNDHPAWD---ATERDIILQRAKDLRDLDIQVHPVFLDPPT 186
Query: 165 ---RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
R ++ + ++ ++ N+ ++ + ++ T+L+ ++ F
Sbjct: 187 HSFRINIFYSDFLYIVYGRQDVSNLVNRGQAQLQHMLNMITALQKPKRAH-------FHL 239
Query: 222 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
++L ++I G E F LK+ K ++ Y E + V
Sbjct: 240 KMDLGNDVRI--------GVEAFILLKRL------------ESAKTNWVYAKGERFAVAV 279
Query: 282 PPEQRI--------------KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
P +++ + Y YG V S E V+ +++++GF D S +
Sbjct: 280 PQSKQVSFATKKELKKDEIRRSYSYGGSSVVFGSDELNKVRSFEPPTLRIIGFRDFSTLK 339
Query: 328 RHYYMKDVNLFIAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-TP 385
+ +K + + AV SA+ + + NK+ I V R V +L TP
Sbjct: 340 PWHCLKPAVFLRPKDDEIIGSGAVFSAIHKKLLASNKIGIAWFVSRPNANPCFVAMLATP 399
Query: 386 ---NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
++ + +P + LP A+D+R P + P+S N E +++ ++L
Sbjct: 400 GSIHIRDDFELPLGIFLVQLPTADDIR--SLPPINPNPISMPSN--LIETMQRILRGMEL 455
Query: 443 APSGKGEILQPEL 455
G+ P L
Sbjct: 456 RSYQPGKYNNPSL 468
>gi|410074099|ref|XP_003954632.1| hypothetical protein KAFR_0A00590 [Kazachstania africana CBS 2517]
gi|372461214|emb|CCF55497.1| hypothetical protein KAFR_0A00590 [Kazachstania africana CBS 2517]
Length = 633
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + E ++ + + GF D S++ R+Y + +A+ G+
Sbjct: 320 KAYRYGSDYAVLPPPLAEKFYYETIPGLDIRGFVDESSLPRYYLSSESVFILADTRMGSM 379
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNVSEKINIPDSFYFN 400
A L AM + KVAI R V ++ +V ++ T N++ K ++ + N
Sbjct: 380 ADIFAFGVLVDAMYKNEKVAIARYVQKKLSDVEMVALIPLRISTENINAKSDVR-ALILN 438
Query: 401 VLPFAEDVREFQFP 414
+PFAED+R FP
Sbjct: 439 RIPFAEDMRVSDFP 452
>gi|112362727|emb|CAL35948.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDGEALPRYFLTSESSFITADTRLGCL 364
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 365 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 423
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|112362709|emb|CAL35957.1| HDF2 protein [Saccharomyces paradoxus]
Length = 601
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 267 VDYEYKSVEDPSKV--------------VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
++YE +S E+ V + E K YRYG V + S + ++
Sbjct: 263 IEYEIRSEENKKNVNEGDKLESSYIPVTISKESVTKAYRYGADYVVLPSVLVDQTVYESF 322
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVRCV 370
+ + GF D + R++ + + A+ G ++A SAL M E K+AI R V
Sbjct: 323 PGLDVRGFLDREALPRYFLTSESSFITADTRLGCLSDSMAFSALVDVMLENRKIAIARYV 382
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD------SFYFNVLPFAEDVREFQFPSF 416
++ + V + L P + E NI S LPFAED R FP
Sbjct: 383 SKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTLCRLPFAEDERVTDFPKL 433
>gi|392564799|gb|EIW57977.1| ku70-like protein [Trametes versicolor FP-101664 SS1]
Length = 663
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 181/474 (38%), Gaps = 77/474 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +L +D SPSM + D + C+ ++ +KK++ G N VG++LF
Sbjct: 27 RDVILFCIDCSPSMLEMRDDERYEDVQTCNLMVALEAAMQIQKKKVLVGPNDAVGIVLFN 86
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTCAGDFL---------DA 101
T + + + V Q + +D V L + L + DFL
Sbjct: 87 TTKRNDNADDSTDVKKGTYVYQPLATIDAPKVMELVQLLDEAREKPDFLRKTFPPMTDKR 146
Query: 102 IVVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
I VG D+L + + G K + ITD DP G + T AR +
Sbjct: 147 IAVG-DVLTSCNWVMRDGAPKTATKRIFFITDE----DDPHPGPSGHRFITSARTTL-ID 200
Query: 157 LRMKNIVVRASLSG------EP---HMRVIIEND--NLLNIFSKKSSA---KTLFVDSTT 202
L + V G +P + V++ + +L +I + +++ +
Sbjct: 201 LMQTGVTVEPFFIGTEDKPFDPAKFYSSVLLPTNLTDLDDISDGDPGSILPESISITRVE 260
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
L + ++ +F L L+ I V Y E+K + ++D + +
Sbjct: 261 ELLAQMRFHEVPKRALFSVPLTLAPGFMIGVKGYGLITEQKKGAYRYFADLGDRMEPVTS 320
Query: 263 HEVKVDYEYKSVED------------PSKVVPPE--QRIKGYRYGPQVVPISSAEW---- 304
VD + + D PS V E Q K G + V + S +
Sbjct: 321 RAAYVDEDRDAEADKAEILYGMDLGAPSAEVDGEEGQDAKTSDVGTRAVQLGSRVFYTAD 380
Query: 305 EAVKFKP---EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKE 360
E F+ E +KLLGF D S + +K V ++ E S + +AL R M +
Sbjct: 381 EVRSFRTLGLEPGIKLLGFKDRSELAFEDNVKHSVFVYPDEMTYSGSKRTFTALLRTMIK 440
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVR 409
K+AIV + R+ V VL +EK++ P F+ LPFA+D+R
Sbjct: 441 KEKIAIVLALMRRNASPVFCAVLP--QAEKVDESGWREPPGFHLIPLPFADDIR 492
>gi|112362725|emb|CAL35949.1| HDF2 protein [Saccharomyces paradoxus]
Length = 612
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDGEALPRYFLTSESSFITADTRLGCL 364
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 365 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 423
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|406602901|emb|CCH45565.1| hypothetical protein BN7_5147 [Wickerhamomyces ciferrii]
Length = 579
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 27/199 (13%)
Query: 277 PSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
P +V P E+ +KGY+YG V + E K+ E + + G + I R Y +
Sbjct: 289 PFEVQPIEKENLVKGYKYGKNTVVLPPTLDEKRKYLTEPGIDIRGIVSSQKIPRCYLTSE 348
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--------- 385
+ + + T A+ A A+ E++ A+ R V ++ + +V VL P
Sbjct: 349 ATIILGAKQSEADTRALGAFVDALTELDSFALARYVAKKNAEVQMV-VLIPVYIKKNGGL 407
Query: 386 -----NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS----------WQPNEQQQ 430
N E + LPF ED + FPS ++ + P+++ +
Sbjct: 408 TNKRKNDDENLEDIRGLILTRLPFYEDEKIATFPSLTEVITTSGKTITENHKLLPSDEVK 467
Query: 431 EAADNLVKMLDLAPSGKGE 449
E D+LV ++L + + +
Sbjct: 468 ELMDDLVTTMNLDSTNETD 486
>gi|302497513|ref|XP_003010757.1| hypothetical protein ARB_03459 [Arthroderma benhamiae CBS 112371]
gi|291174300|gb|EFE30117.1| hypothetical protein ARB_03459 [Arthroderma benhamiae CBS 112371]
Length = 376
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M + N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +V +L P++
Sbjct: 1 MSNSNVIIAQRTNNKAIIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID--- 56
Query: 392 NIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKML 440
PD LPFAEDVR ++FP + PNE A + V+ +
Sbjct: 57 --PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVVKEHRNLPNENLLSAMEKYVENM 114
Query: 441 DLAPSGK 447
+L G+
Sbjct: 115 ELVQPGE 121
>gi|349580387|dbj|GAA25547.1| K7_Yku80p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|151946262|gb|EDN64493.1| KU protein [Saccharomyces cerevisiae YJM789]
Length = 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362657|emb|CAL35983.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362661|emb|CAL35981.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362677|emb|CAL35973.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|307185845|gb|EFN71686.1| ATP-dependent DNA helicase 2 subunit 1 [Camponotus floridanus]
Length = 506
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 30/154 (19%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE--------KLCSRLIQKKLIYGKNHEVGVILFG 51
REA L L+D + M + P+ E KL +++++KL + +GV+LFG
Sbjct: 25 REATLFLVDATHRMFEIEKNQTQPETERSYIQKFFKLYKQILRQKLAWSMQDWMGVVLFG 84
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG----------DFLDA 101
TEE++ ++H++ LQ+++VV +Q ++ L + G DA
Sbjct: 85 TEESDAN-----SSWKHIQNLQELRVVTLDDLQRIRKLTKSGMKGYQSIKSEDAYPLHDA 139
Query: 102 IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD 135
+ +D+ +K +T K+ + LIT + L D
Sbjct: 140 LTYAIDIFLK--IKTVLTKRRIVLITSHVAKLAD 171
>gi|268574284|ref|XP_002642119.1| C. briggsae CBR-CKU-80 protein [Caenorhabditis briggsae]
Length = 717
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 278 SKVVPPEQRIK---GYRYGPQVVPISS----AEWEAVKFKPEKS---VKLLGFTDASNIL 327
+K + P ++IK GY +G V+ + ++ F ++ +KL+ FT +NIL
Sbjct: 291 AKNLKPVEKIKTKHGYNFGKSVIMMDQDYLKEKYNDHNFNEGQTGGVLKLIQFTKRANIL 350
Query: 328 RHYYMKDVNLFIAEPGNS---RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
Y M+ + NS AT A AL RAM +M I R + Q +V +L
Sbjct: 351 DSYLMEASAKTVLPSLNSPKSGATKAAVALIRAMFDMRVAGICRYTFHATSQVQLVALL- 409
Query: 385 PNVSEKINIPDSFYFNV--LPFAEDVREFQFPSFS---KFPVSWQPNEQQQEAADNLVKM 439
P+ + + +Y LPF++D+R +FP F+ + +P Q A D+L+
Sbjct: 410 PHRDAETGV---YYLRSVKLPFSDDMRTLKFPKFTFDEDEEDTNKPTVAQLSAVDDLIDK 466
Query: 440 LDLAPSGKGEILQPELTPNPALEV 463
+ L S +++ ++ +P L++
Sbjct: 467 MQLPESEISSLIEGGMS-DPKLQM 489
>gi|317035392|ref|XP_001396808.2| ATP-dependent DNA helicase II subunit 1 [Aspergillus niger CBS
513.88]
Length = 653
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 105/522 (20%), Positives = 207/522 (39%), Gaps = 102/522 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF-------- 98
GT+ + E+E ++ Y + + D+ V H V+ L+ L GD
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHEVKGLRALVDDE--GDSREVLSPAK 145
Query: 99 ----LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 154
+ ++ + + + ++ L +ITD P D T + A+ +
Sbjct: 146 EQVSMANVLFCANQIFTSRAPNFLSRR-LFIITDNDNPHGDDK--TLRSAATVRAKDLYD 202
Query: 155 FGLRMK-----------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
G+ ++ + ++ SL +P +++D SK ++A
Sbjct: 203 LGVTIELFPISRPEHEFKNSKFYDDIIYKSLPSDPEAPAYLQSD------SKAATATGDG 256
Query: 198 VDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ +L + +R + T F LEL +I V Y L++ +AP+
Sbjct: 257 ISLLNTLLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYI--------LLRR---QAPA 305
Query: 257 TDKFATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
+ F V S +D + V + K Y++G V S E +A++
Sbjct: 306 RNSFIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFG 365
Query: 312 EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
E ++++GF + + ++H Y ++ +E ++ SAL + + K+A+
Sbjct: 366 EPVIRVIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQTLLRSKKMAL 421
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFP 420
V + R+G V+ ++ EK++ P + LPFA+D+R+ + + P
Sbjct: 422 VWFIARKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIRQNPETTLNVAP 479
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
E + +V+ L L P G + +P PNP+L+
Sbjct: 480 ------ESLIDQMRVIVQQLQL-PKG---VYEPLKYPNPSLQ 511
>gi|112362717|emb|CAL35953.1| HDF2 protein [Saccharomyces paradoxus]
Length = 607
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 364
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 365 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 423
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|321252227|ref|XP_003192332.1| damaged DNA binding protein [Cryptococcus gattii WM276]
gi|317458800|gb|ADV20545.1| Damaged DNA binding protein, putative [Cryptococcus gattii WM276]
Length = 839
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E +K +++G VP+ + + + K +++LGF NI R++ + + +
Sbjct: 391 EDVVKAWKFGSTWVPVPEKTFATLATR--KGIEVLGFFPVENIRRYHLIGEARYVWPDLL 448
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTPNVSEK-------INIP 394
+ +A + SAL AM + R +W + G + + G P + K N+
Sbjct: 449 SPKAQIQFSALVEAMHD-------RKIWVLKDGGEPTL-GACVPVIENKGTDEEGRPNVL 500
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDL 442
Y+ LPFAED R F+FPS + + P ++Q D LV +DL
Sbjct: 501 PYMYWLKLPFAEDERIFRFPSLATIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDL 557
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 9 LLLLDVSPSMHSVLPD------VEKLC------SRLIQKKLIYGKNHEV-GVILFG---- 51
+ +DVSP M + D V KL +R IQ K++ G+ EV G++ FG
Sbjct: 11 IFAIDVSPPMGQLKADPSGSGKVSKLSLAKEYVARQIQSKILSGRKTEVIGLVSFGGRTN 70
Query: 52 --------TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV 103
E ENEL Y V + +++ L +L +G AG+ + A++
Sbjct: 71 NQAYNISLEEGMENEL------YRAVSSDVACQTAKPKVLEVLMNLEEGKHAGNPVSALM 124
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDA 129
VG+DM I+ + T + L LITD
Sbjct: 125 VGLDM-IQSWKITKQWSVDLTLITDG 149
>gi|112362721|emb|CAL35951.1| HDF2 protein [Saccharomyces paradoxus]
Length = 605
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 363 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362719|emb|CAL35952.1| HDF2 protein [Saccharomyces paradoxus]
Length = 608
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362695|emb|CAL35964.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|146182742|ref|XP_001025145.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila]
gi|146143715|gb|EAS04900.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila SB210]
Length = 727
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR---ATVAVSA 353
V I E + +K E +KL+GF D S L+ Y+ +LFI P NS ++ A
Sbjct: 337 VRIDKDELQQIKNLEEVGMKLIGFKDKS-FLKVYFNLKPSLFIY-PDNSLVKGSSQLFDA 394
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDSFYFNVLPFAEDV 408
L + M + KVAIV+ + R+G Q + G L P + E + IP F+ LP+ ++
Sbjct: 395 LIKKMIQKEKVAIVKIINRKGGQ-LRFGCLLPQLEEYSPVDHVQIPPGFHLITLPYCGEI 453
Query: 409 REFQFPSFSK 418
P F K
Sbjct: 454 N--HLPKFVK 461
>gi|112362713|emb|CAL35955.1| HDF2 protein [Saccharomyces paradoxus]
Length = 610
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362711|emb|CAL35956.1| HDF2 protein [Saccharomyces paradoxus]
Length = 604
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362707|emb|CAL35958.1| HDF2 protein [Saccharomyces paradoxus]
gi|112362723|emb|CAL35950.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|58262800|ref|XP_568810.1| damaged DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108504|ref|XP_777203.1| hypothetical protein CNBB4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259888|gb|EAL22556.1| hypothetical protein CNBB4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223460|gb|AAW41503.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 836
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
+K +++G VP+ + K +++LGF NI R++ + + + + +
Sbjct: 391 VKAWKFGSTWVPVPEKTF--TTLDTSKGIEVLGFFPVENIRRYHLIGEARYVWPDLLSPK 448
Query: 347 ATVAVSALARAMKEMNKVAIVRCVW---RQGQQSV-----VVGVLTPNVSEKINIPDSFY 398
A + SAL AM + R +W +G+ ++ V+ P+ K +I Y
Sbjct: 449 AQIQFSALVEAMHD-------RKIWVLKDRGEPTMGACVPVIENKGPDEEGKPSILPYMY 501
Query: 399 FNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDL 442
+ LPFAED R F+FPS + + P ++Q D LV +DL
Sbjct: 502 WLKLPFAEDERTFRFPSLTTIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDL 554
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 9 LLLLDVSPSMHSVLPD------VEKLC------SRLIQKKLIYGKNHEV-GVILFG---- 51
+ +DVSP M + D V KL +R IQ K++ G+ EV G++ FG
Sbjct: 11 IFAIDVSPPMGELKADPSGSGKVSKLSLAKEYVARQIQSKILSGRKTEVIGLVSFGGRTN 70
Query: 52 --------TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV 103
E ENEL Y V + ++ L +L +G AG+ + A++
Sbjct: 71 NQAYNSGLEEGMENEL------YRAVSSDVACQTAKAKALEVLMNLEEGKHAGNPVSALM 124
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDA 129
VG+DM I+ + T + L LITD
Sbjct: 125 VGLDM-IQSWKVTKQWSVDLTLITDG 149
>gi|112362705|emb|CAL35959.1| HDF2 protein [Saccharomyces paradoxus]
Length = 611
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|433654363|ref|YP_007298071.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292552|gb|AGB18374.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 269
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K VP E+ ++GY Y P + V I + E + K++ ++ FTD S I Y+ D
Sbjct: 52 NKEVPDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLSQIDPIYF--DKT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVYNDNYMVLETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|367008522|ref|XP_003678762.1| hypothetical protein TDEL_0A02190 [Torulaspora delbrueckii]
gi|359746419|emb|CCE89551.1| hypothetical protein TDEL_0A02190 [Torulaspora delbrueckii]
Length = 626
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 267 VDYE-YKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
++YE Y D V PE K YRYG V + S E ++ + + GF +
Sbjct: 293 IEYEVYDQKADKRVSVAPESIAKAYRYGSDYVVLPSTLDEQRFYRTTPGIDIRGFLERKR 352
Query: 326 ILRHYYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
+ R++ + +A+ G+ V+ + L ++ E +K+ + R V + + V + ++
Sbjct: 353 LPRYFLNSESRFILADTRSGSVADIVSFNVLVDSLSEQDKLIVARFVAKPNAE-VQMCMM 411
Query: 384 TPNV--SEKINIPDSFYFNVLPFAEDVREFQFPSFS 417
P + E + + N LPFAED R FP +
Sbjct: 412 CPMLVNDEHGDKIRTLILNRLPFAEDERVASFPRLT 447
>gi|112362715|emb|CAL35954.1| HDF2 protein [Saccharomyces paradoxus]
Length = 605
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|302306501|ref|NP_982917.3| ABL030Wp [Ashbya gossypii ATCC 10895]
gi|299788546|gb|AAS50741.3| ABL030Wp [Ashbya gossypii ATCC 10895]
gi|374106120|gb|AEY95030.1| FABL030Wp [Ashbya gossypii FDAG1]
Length = 602
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 12/150 (8%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
VP E K YRYG V + + + + GF D +LRH+ + +A
Sbjct: 286 VPKEHVTKAYRYGADYVVLPELLEHERLYTTTPGLDIRGFIDTGKVLRHHLCSESVYIMA 345
Query: 341 EP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQG---QQSVVVGVLTPNVSEKINIPD 395
+ G + V +AL AM K AI R V ++ Q ++ +L ++K D
Sbjct: 346 DSREGTAADYVTFAALVDAMIAAEKFAIARYVQKKDSEVQMCLLCPLLVEPSTKKRPADD 405
Query: 396 -------SFYFNVLPFAEDVREFQFPSFSK 418
+ LPFAED R FP K
Sbjct: 406 DAAEAKRALVLCRLPFAEDERSSDFPPLVK 435
>gi|374708956|ref|ZP_09713390.1| hypothetical protein SinuC_01957 [Sporolactobacillus inulinus CASD]
Length = 273
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+KGY Y P Q VPIS E +++ + +K V+++ F S I YY K + FI P +
Sbjct: 61 VKGYEYAPGQFVPISEEELSSLQDETDKHVEIINFVKLSEIDPIYYEK--SYFIG-PDSG 117
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
A S L +A+++ +K+AI + R Q +
Sbjct: 118 NGLRAFSLLRQAIQDSDKIAIANIIIRSKQHLAAI 152
>gi|256079194|ref|XP_002575874.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 1269
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 101/503 (20%), Positives = 199/503 (39%), Gaps = 72/503 (14%)
Query: 5 REALLLLLDVSPSM---HSVLP----------------DVEKLCSRLIQK-KLIYGKNHE 44
R ++ L+D +P+M H D+ LC + Q+ K ++
Sbjct: 663 RSGVIFLIDCTPTMLGLHGSFDLNSSNAVDSSSVKSGFDLSLLCCQTFQQNKALHSPFDM 722
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ----------GTC 94
+G++L T E+ + +++ VLQ + + D + ++ L Q GT
Sbjct: 723 IGLVLMRTSESSVDT-------KNIMVLQPLGLADSTRILEIEKLRQLKPDELEKRYGTI 775
Query: 95 AGD------FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 148
+A+ + I +T+ G KH+ L+TD P+ + + K ++ +
Sbjct: 776 VNQPNITFPLHEALWACQNQFITS-SKTF-GIKHIFLLTDDPDPV-NKNANLKRRAIAKM 832
Query: 149 ARQMVAFGLRMKNIVVRASLSGEPHMRVIIE--NDNLLNIFSKKSSAKTLFVDSTTSLRG 206
A M +G+ ++ I ++ + + + E D L+ KSS + L
Sbjct: 833 A-DMKQYGIELEVIPIKQQNTKFDYKLLYDELLEDELMYPDVDKSSYHPDPTERLDELLS 891
Query: 207 ARKTRDISPVTIFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ ++ + R L S+ + + + VY + P+ S T +
Sbjct: 892 RINSHELRRSRLARLPFHLGSSKNLTLGISVYCLVYPTRLPSPIWLSSSDNKTVRVHRDY 951
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEW-EAVKFKPEKSVKLLGFTDA 323
K+ Y S + ++P ++G + + + E EAV+ + LLGF
Sbjct: 952 YKIIDPYGSFDPVKDLLPSHDLVRGIKLDGRYICFDKDELTEAVRNIAPVGLHLLGFISQ 1011
Query: 324 SNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
+ R+YY++ + ++ E + + +AL +AI V R+GQ +V +
Sbjct: 1012 KFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQFPRLVAL 1071
Query: 383 LTPNVSEKIN----------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
L +E+ N IP F+ LP+A+D R+ + P+ + NE Q +
Sbjct: 1072 LPQ--AEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIEIPT------NEIANESQVDI 1123
Query: 433 ADNLVKMLDLAPSGKGEILQPEL 455
A +++ L + P G+I P L
Sbjct: 1124 AKAMIRKL-MVPFTPGQIENPTL 1145
>gi|323307743|gb|EGA61006.1| Yku80p [Saccharomyces cerevisiae FostersO]
Length = 419
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 210 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 269
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 270 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 328
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 329 CRLPFAEDERVTDFPKL 345
>gi|112362697|emb|CAL35963.1| HDF2 protein [Saccharomyces paradoxus]
Length = 589
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 308 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 367
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + S
Sbjct: 368 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKFVKSLTL 426
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 427 CRLPFAEDERVTDFPKL 443
>gi|353231766|emb|CCD79121.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 265 VKVDYEYKSVEDP-------SKVVPPEQRIKGYRYGPQVVPISSAEW-EAVKFKPEKSVK 316
V+V +Y + DP ++P ++G + + + E EAV+ +
Sbjct: 284 VRVHRDYYKIIDPYGSFDPVKDLLPSHDLVRGIKLDGRYICFDKDELTEAVRNIAPVGLH 343
Query: 317 LLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
LLGF + R+YY++ + ++ E + + +AL +AI V R+GQ
Sbjct: 344 LLGFISQKFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQ 403
Query: 376 QSVVVGVLTPNVSEKIN----------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
+V +L +E+ N IP F+ LP+A+D R+ + P+ +
Sbjct: 404 FPRLVALLPQ--AEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIEIPT------NEIA 455
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPEL 455
NE Q + A +++ L + P G+I P L
Sbjct: 456 NESQVDIAKAMIRKL-MVPFTPGQIENPTL 484
>gi|323347187|gb|EGA81462.1| Yku80p [Saccharomyces cerevisiae Lalvin QA23]
Length = 524
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 210 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 269
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 270 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 328
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 329 CRLPFAEDERVTDFPKL 345
>gi|449303204|gb|EMC99212.1| hypothetical protein BAUCODRAFT_395450 [Baudoinia compniacensis
UAMH 10762]
Length = 674
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 200/514 (38%), Gaps = 80/514 (15%)
Query: 5 REALLLLLDVSPSM-------------HSVLPDVEKL-CS-RLIQKKLIYGKNHEVGVIL 49
++A+L +DVS SM ++ P + L C+ L+Q+++I N +G++L
Sbjct: 31 KDAVLFAIDVSESMLRKPAEGDPKKPDTTLSPTLAALKCAYALMQQRIISNPNDMMGILL 90
Query: 50 FGTEETENELTKEVG----GYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDA--- 101
FGTE+++ + E G Y H +L D+ V V+ L+ L + + D L A
Sbjct: 91 FGTEKSKFQDGDESGRGGLQYPHCYLLTDLDVPAAADVKQLRSLVEDEAESSDLLVASKE 150
Query: 102 ------IVVGVDMLIKKYGETYKGKKHLCLITDALCP-----------------LKDPDV 138
++ + + + ++ L L+TD P L D V
Sbjct: 151 EVSMANVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPHASNRDARNSAAVRAKDLYDLGV 209
Query: 139 GTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
+ +S R + N +V +S+ +P + D I + S+AK
Sbjct: 210 TIELFPISHPNRGYTFDRSKFYNDIVYSSMPSDPDAPAPLTAD----IKAASSTAKDGIS 265
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ L + + E+ KI V Y ++ P Y P TD
Sbjct: 266 LLQSLLSSVQSRSAMRRAQFSNMPFEIGPGFKISVKGYILVRRQE-PKRTAYIYLPPDTD 324
Query: 259 K---FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
K ++H V +D ++ V + + +++G + + S E +K + +
Sbjct: 325 KPQIVSSHGTLV------ADDTARTVEKAEVRRAFKFGGETISFSEEELAKIKHFGDPVL 378
Query: 316 KLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
+++GF + ++K N FI +E +T SAL + + + ++ I + R+
Sbjct: 379 RIIGFKPLDMLPIWAHVKQ-NYFIYPSEEDYVGSTRVFSALHQKLLKDQRIGIAWFIPRR 437
Query: 374 GQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 428
+V L P + +P + LPFA+D+RE K P +
Sbjct: 438 NSTPALV-ALIPGREHRSEEGEQTLPPGIWIKHLPFADDIREPPQTEVVKAP------DP 490
Query: 429 QQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+A +++ L L + I P PNPAL+
Sbjct: 491 LIDAMRVVIQQLQLPKA----IYDPRKYPNPALQ 520
>gi|112362671|emb|CAL35976.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|256269984|gb|EEU05234.1| Yku80p [Saccharomyces cerevisiae JAY291]
Length = 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|392297267|gb|EIW08367.1| Yku80p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|207342324|gb|EDZ70116.1| YMR106Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 523
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFP 414
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFP 448
>gi|6323753|ref|NP_013824.1| Yku80p [Saccharomyces cerevisiae S288c]
gi|2498435|sp|Q04437.1|KU80_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=High affinity DNA-binding factor subunit
2; AltName: Full=Yeast Ku80
gi|817864|emb|CAA89742.1| unknown [Saccharomyces cerevisiae]
gi|112362659|emb|CAL35982.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362663|emb|CAL35980.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362665|emb|CAL35979.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362667|emb|CAL35978.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362669|emb|CAL35977.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362673|emb|CAL35975.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362675|emb|CAL35974.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362679|emb|CAL35972.1| HDF2 protein [Saccharomyces cerevisiae]
gi|190408335|gb|EDV11600.1| yeast Ku80 protein [Saccharomyces cerevisiae RM11-1a]
gi|259148680|emb|CAY81925.1| Yku80p [Saccharomyces cerevisiae EC1118]
gi|285814108|tpg|DAA10003.1| TPA: Yku80p [Saccharomyces cerevisiae S288c]
gi|323332067|gb|EGA73478.1| Yku80p [Saccharomyces cerevisiae AWRI796]
gi|323353081|gb|EGA85381.1| Yku80p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|323336300|gb|EGA77571.1| Yku80p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362655|emb|CAL35984.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|365763827|gb|EHN05353.1| Yku80p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTM 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|405970038|gb|EKC34975.1| ATP-dependent DNA helicase 2 subunit 1 [Crassostrea gigas]
Length = 607
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 177/444 (39%), Gaps = 63/444 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRL----IQKKLIYGKNHEVGVILFGTE 53
R+ L+ L+D S SM + +LC R +Q K+I VG++ +GTE
Sbjct: 28 RDGLIFLIDCSKSMFDKDDEDNEEEESHFQLCLRCAQTTLQNKIISSDKDLVGIVFYGTE 87
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG-----------TCAGDFLDAI 102
+++N ++HV V Q ++ + L++L A DA+
Sbjct: 88 KSQNP-----SDFKHVYVYQGLEQPGAERILELENLIDDGMKSFEKDFGHNTAYSLNDAL 142
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKE--DQVSTIARQMVAFGLRMK 160
+M + G K + L T+ +P G + Q T A + G+ ++
Sbjct: 143 WTCQNMFANSSQKV--GFKRIMLFTNN----DNPHAGAPQLQRQAKTKAGDLKETGIELE 196
Query: 161 NIVVRA---SLSGEPHMRVII--ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
+ ++ S + + ++ +D+ + + + L + R R I P
Sbjct: 197 LMHLQKPNESFEVDKFYKDLLYSADDDFTELANPAERLEELLTRVRSKDHKKRALRRI-P 255
Query: 216 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 275
+T+ G +++ V VY PT K S + ++ TH +
Sbjct: 256 LTLGPG-------LELGVGVYTLVRPCYKPTAVKLSRN--TNEELKTHSKTY------LR 300
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
+ +V+ P+ K YG + + + E +K E KL+GF +S + ++Y++K
Sbjct: 301 ETGEVLMPQDLKKAQTYGGKRISFENDEINQIKNFGETGFKLMGFKPSSLLKKYYHVKPA 360
Query: 336 N-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--KIN 392
++ E + +T +AL + E + AI + + + V L P E K N
Sbjct: 361 QFIYPDETTITGSTTLFTALLKKSLERDVTAICKYISGKNFPPRFV-ALVPQEEEFDKQN 419
Query: 393 I---PDSFYFNVLPFAEDVREFQF 413
+ P F+ LPFA+D R+ +F
Sbjct: 420 VQISPPGFHVIYLPFADDFRKVKF 443
>gi|254580595|ref|XP_002496283.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
gi|238939174|emb|CAR27350.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
Length = 594
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVK--FKPEKS-VKLLGFTDASNILRHYYMKDVNLFIAEPGN 344
K + YG + I+ E V+ + E+S +K++GF D + + ++ D LF+ P
Sbjct: 328 KVFPYGDLDITITDEELNEVRKSYTEEESFLKIIGFRDYNKCIHYFNNIDRALFVV-PDE 386
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNVL 402
R ++ LA K + V VW + + + V VL+P+ +E N + FY +
Sbjct: 387 FRFEGSIRTLASLFKNLRAKGKVAVVWGKLKTNSHPAVFVLSPSRNEDPN--EGFYLYRI 444
Query: 403 PFAEDVREF 411
PFAE++R F
Sbjct: 445 PFAEELRRF 453
>gi|254570873|ref|XP_002492546.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|238032344|emb|CAY70367.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|328353442|emb|CCA39840.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 620
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPP--------EQRIKGYRYGPQV-VPIS 300
+ + P KF +E +K VE S+ V P EQ IK Y G +P++
Sbjct: 251 FYHETPRKIKFVVNEGST---FKDVETKSQFVDPTSGKEFSSEQLIKAYPLGADAYIPLN 307
Query: 301 SAEWEAVKFKPE----KSVKLLGFTDASNILRHYYMKDVNLFIAEPGN----SRATVAVS 352
S + + + + S+++LGF D SN L Y + P N + + S
Sbjct: 308 SEQVKTINRFNDIINIPSLEILGFRDISNWLPQYQFGKASFL--SPNNYGDFTHSQRTFS 365
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS--EKINIPDSFYFNVLPFAEDVRE 410
L ++M + +K A++ + + G++ + E N+P F+ LP+ +DVR+
Sbjct: 366 CLLQSMTKKSKFAVLFGTLKNNAAPRLFGMIPSTLPQYESCNLPQGFFLIKLPYLDDVRQ 425
Query: 411 F 411
Sbjct: 426 L 426
>gi|390362977|ref|XP_003730269.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Strongylocentrotus purpuratus]
Length = 325
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
ED +++ P K YG + + E + VK + + L+GF S + +++++K
Sbjct: 31 CEDTGELLMPSDIKKYQTYGGKNIIFEKDEVDEVKKFYDPGLTLMGFKPRSALKKYFHVK 90
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--- 389
LF E S + +AL + +KVAI R + R+ V +L P E
Sbjct: 91 PAQFLFPDETSVSGSNTLFNALLQRCSARDKVAICRYIPRKNSPPKFVALL-PQKEELDE 149
Query: 390 -KINI-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
+ I P F+ LPF++D+R+ + P+ + Q + A N+VK L
Sbjct: 150 HSVQITPPGFHLIFLPFSDDMRKLEHPTHPR------ATPDQIDKAKNVVKKLQF 198
>gi|260805378|ref|XP_002597564.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
gi|229282829|gb|EEN53576.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
Length = 613
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 170/442 (38%), Gaps = 60/442 (13%)
Query: 5 REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
R++L+ L+D S SM S K ++ K+I VGV+ F T + +N
Sbjct: 42 RDSLIFLIDCSASMFQEEGEEDSAFHKCVKCVHSAMRNKIISNDRDLVGVVFFATNKHKN 101
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKK----- 112
++HV + QD+ V ++ L+ + + F + D + +
Sbjct: 102 P-----SDFKHVYIFQDLDVPGAQMILELEEIFEEDGVERFEEEFGHSTDFSMSEVLWNC 156
Query: 113 ---YGETYK--GKKHLCLITDALCPLKDPDVG--TKEDQVSTIARQMVAFGLRMKNIVVR 165
+ + G K L L T+ DP G + Q T A+ + G+ + + +
Sbjct: 157 SNMFSTCTQKLGHKRLLLFTNN----DDPHAGNINLQRQAKTKAKDLEGLGINTELLHMN 212
Query: 166 ASLSGEP--------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
GEP + VI E++++ + + + L S R T
Sbjct: 213 KP-GGEPFDITKFYQDIIVIPEDEDVTCLPDPAAKFEELLERQVNSEHKKR--------T 263
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE-D 276
+ R L L E ++ V +Y + E Y + D EV+ K+V+ +
Sbjct: 264 LARVPLSLGEGLEFGVGIYTQVRE-------TYKGRKVKLDARTNQEVRT--ITKTVDSE 314
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K + P K +G + + + E +K + + L+GF +++ +++++
Sbjct: 315 TGKFLMPSDIKKVQTWGGRDIAFENDEIVEMKVFDKPGLVLMGFKPRTSLKPYFHIRPAQ 374
Query: 337 -LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 392
LF E S +T SAL + + V I R + R+ V +L N
Sbjct: 375 FLFPDESVISGSTRLFSALLQRCLARDVVPICRYIPRKNSPPKFVALLPQKEEFDDNNMQ 434
Query: 393 -IPDSFYFNVLPFAEDVREFQF 413
P F+ LPFA+D+R+ F
Sbjct: 435 STPAGFHVVFLPFADDLRKLNF 456
>gi|346325135|gb|EGX94732.1| DSB repair complex subunit Ku70, putative [Cordyceps militaris
CM01]
Length = 643
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V S E ++VK ++++GF +I L
Sbjct: 321 AEDSTRTVEKGEIKKAYKFGGEYVYFSPEEQKSVKDFGSPVIRIIGFKSRRSIPLWSSVK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
K ++ +E +T +AL + + +KVA+ C+ R V+ ++ P+ S+
Sbjct: 381 KSTFIYPSEEDYVGSTRVFTALWEKLLKDDKVALAWCIVRSNANPVLTAIM-PSKSQSDE 439
Query: 393 ------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+P + LPFA+D+R+ + P K Q ++ + +++ L L +
Sbjct: 440 YSGTPFLPAGLWLYPLPFADDLRDIKPP--GKLA---QASDDLKTQMRTIIQQLQLPKA- 493
Query: 447 KGEILQPELTPNPALE 462
+ P PNP+L+
Sbjct: 494 ---MYNPTKYPNPSLQ 506
>gi|302677669|ref|XP_003028517.1| ku70-like protein [Schizophyllum commune H4-8]
gi|300102206|gb|EFI93614.1| ku70-like protein [Schizophyllum commune H4-8]
Length = 661
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 298 PISSAEWEAVKFKP---EKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSA 353
P +AE E KF+ E +KLLGF DA + +K + ++ E S + SA
Sbjct: 377 PFYTAE-EVKKFRTLGLEPGIKLLGFKDADTLAFEDNIKHSHFIYPDELAYSGSKRTFSA 435
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI----PDSFYFNVLPFAEDVR 409
L R++ + NK+ +VR + R+ + P + + + P F+ LPFA+D+R
Sbjct: 436 LLRSLVKKNKIGLVRVLTRRNATPTFCA-MVPQMEQTDDAGWTEPAGFHLIPLPFADDIR 494
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
+ + ++ EAA + + + G P+ PNPAL N
Sbjct: 495 Q------ATVEKGYRAGRPLMEAAMPFIHKITIKKGG----YPPDSYPNPALAYHN 540
>gi|403216001|emb|CCK70499.1| hypothetical protein KNAG_0E02380 [Kazachstania naganishii CBS
8797]
Length = 595
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 265 VKVDYEYKSVEDPSK---VVPPEQRIKGYRYGPQ--VVPISSAEWEAVKFKPEKSVKLLG 319
VK EY + E+ + V + K YRYG V+P + + + ++ + G
Sbjct: 262 VKSVIEYTTKEESGRGAVSVSSQNVTKAYRYGADYVVLPDTIVDRSVYRTGGPAAIDIRG 321
Query: 320 FTDASNILRHYYMKDVNLFI---AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
F D + + RHY + ++FI + G L AM + K+AI R V R
Sbjct: 322 FMDVTALPRHYLHSE-SIFILPDSRTGGVADETTFHVLVDAMLQAGKLAIARYVNRDRGS 380
Query: 377 SVVVGVLTPNV-SEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFP 420
V + L V S + + + LPFAED R FP + K P
Sbjct: 381 DVQMCALVALVTSTQHSSGSTLVLTRLPFAEDQRNSLFPPLTPKLP 426
>gi|50548281|ref|XP_501610.1| YALI0C08701p [Yarrowia lipolytica]
gi|74604554|sp|Q6CCK2.1|KU70_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|49647477|emb|CAG81913.1| YALI0C08701p [Yarrowia lipolytica CLIB122]
Length = 585
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 232 KVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYR 291
K WVY TG EK P K + V ++E V + R K ++
Sbjct: 266 KAWVY--TGGEK-----------PEIAKLESQAV-------TIESGRSVDKADLR-KTFK 304
Query: 292 YGPQVVPISSAEWEAVKFKPEKSVKLLGF---TDASNILRHYYMKDVNLFIAEPGNSRAT 348
+G VP + + +++ E +++LGF +D S + H + L+ + +
Sbjct: 305 FGNDYVPFTEEQLTQIRYFGEPIIRILGFHNSSDFSELFIHSVRSSMFLYPTDEKLVGSI 364
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDV 408
A SAL +++K +K+A+ + R+G + ++ +L P+ E + + LPF +D+
Sbjct: 365 RAFSALYQSLKNKDKMALAWVIVRKGAKP-ILALLIPSTKE----IEGLHMVFLPFTDDI 419
Query: 409 RE 410
R+
Sbjct: 420 RQ 421
>gi|154289722|ref|XP_001545469.1| hypothetical protein BC1G_16015 [Botryotinia fuckeliana B05.10]
Length = 649
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 105/525 (20%), Positives = 215/525 (40%), Gaps = 113/525 (21%)
Query: 5 REALLLLLDVSPSMHSVLP--DVEKL-----------CSRLI-QKKLIYGKNHEVGVILF 50
++A+L ++DVS SM + P D +K C+ +I Q+++I +G++L+
Sbjct: 29 KDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMMGIMLY 88
Query: 51 GTEET--ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD----------F 98
GTEET +++ + Y H +L D+ + V++LK + + +
Sbjct: 89 GTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEEANKILIPTEETLD 148
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQ--VSTIARQMVAFG 156
++ ++ + + + G + L +ITD DP G K + + A+ + G
Sbjct: 149 MNNLLFCANQIFTTRAPNF-GSRRLFIITDK----DDPHSGDKSQKSLAAVRAKDLYDIG 203
Query: 157 L---------------RMK---NIVVRASLSGEPHM-----------RVIIENDNLLNIF 187
+ R K +I+ R L+ +P + + + N+ +L++
Sbjct: 204 VVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLLNNLILDVN 263
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
SK+ + ++LF + + G T ++ + + + + VW+ + E+ PTL
Sbjct: 264 SKQVAKRSLFSNLPFEI-GPNLTISVNGYNVLH---KQTPARRTFVWMGGEVPEK--PTL 317
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
+ T + A ED ++V+ + K Y++G V + E + +
Sbjct: 318 E--------TTQMA-------------EDTARVIQKVEIKKAYQFGGSQVLFTPDEQKQL 356
Query: 308 KFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
K + ++++GF S + K ++ +E +T SAL + + K+ +
Sbjct: 357 KDFGQPGLRIIGFKPQSMLPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGL 416
Query: 367 VRCVWRQGQQSVVVGV------LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
+ R+ +V + L P +++I P + +PFA+D+R P+
Sbjct: 417 GWYIARKNAIPAIVAILPSAEKLDPATNQQI-FPAGLWLYPMPFADDLRSVAAPA----- 470
Query: 421 VSWQPNEQQQEAADNL---VKMLDLAPSGKGEILQPELTPNPALE 462
P E DN+ V+ L L P + P PNP+L+
Sbjct: 471 ----PIVAPDELIDNMRVVVQQLQL-PKAQ---YDPRNYPNPSLQ 507
>gi|366991251|ref|XP_003675391.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
gi|342301256|emb|CCC69022.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
Length = 608
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+ P++ K + YG Q + ++ E + K E +K++GF N +R++ D L
Sbjct: 332 IKPDELCKVFPYGDQDIELNDKEVAKINDDYSKHESFLKVIGFRSTKNSIRYFNNIDKAL 391
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ--GQQSVVVGVLTPNVSEKINIPD 395
F+ P S+ + +A + + K VW + ++ + +L+P + I+ +
Sbjct: 392 FVV-PDESQYEGTIKTMASLFRVLKKRDKCMIVWGKVKSNSNLRLYILSPTTN--IDRNE 448
Query: 396 SFYFNVLPFAEDVREF 411
FY +PF +++R+F
Sbjct: 449 GFYLYRIPFLDEIRKF 464
>gi|333896429|ref|YP_004470303.1| Ku protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111694|gb|AEF16631.1| Ku protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 269
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V E+ +KGY Y P + V I + E + K++ ++ FTD I Y+ D
Sbjct: 52 NKEVSDEEIVKGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYF--DKT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVFNDNYMVMETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|347832489|emb|CCD48186.1| BcKU70, protein involved in DNA reparation [Botryotinia fuckeliana]
Length = 649
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 105/525 (20%), Positives = 215/525 (40%), Gaps = 113/525 (21%)
Query: 5 REALLLLLDVSPSMHSVLP--DVEKL-----------CSRLI-QKKLIYGKNHEVGVILF 50
++A+L ++DVS SM + P D +K C+ +I Q+++I +G++L+
Sbjct: 29 KDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMMGIMLY 88
Query: 51 GTEET--ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD----------F 98
GTEET +++ + Y H +L D+ + V++LK + + +
Sbjct: 89 GTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEEANKILIPTEETLD 148
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQ--VSTIARQMVAFG 156
++ ++ + + + G + L +ITD DP G K + + A+ + G
Sbjct: 149 MNNLLFCANQIFTTRAPNF-GSRRLFIITDK----DDPHSGDKSQKSLAAVRAKDLYDIG 203
Query: 157 L---------------RMK---NIVVRASLSGEPHM-----------RVIIENDNLLNIF 187
+ R K +I+ R L+ +P + + + N+ +L++
Sbjct: 204 VVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLLNNLILDVN 263
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
SK+ + ++LF + + G T ++ + + + + VW+ + E+ PTL
Sbjct: 264 SKQVAKRSLFSNLPFEI-GPNLTISVNGYNVLH---KQTPARRTFVWMGGEVPEK--PTL 317
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
+ T + A ED ++V+ + K Y++G V + E + +
Sbjct: 318 E--------TTQMA-------------EDTARVIQKVEIKKAYQFGGSQVLFTPDEQKQL 356
Query: 308 KFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
K + ++++GF S + K ++ +E +T SAL + + K+ +
Sbjct: 357 KDFGQPGLRIIGFKPQSMLPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGL 416
Query: 367 VRCVWRQGQQSVVVGV------LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
+ R+ +V + L P +++I P + +PFA+D+R P+
Sbjct: 417 GWYIARKNAIPAIVAILPSAEKLDPATNQQI-FPAGLWLYPMPFADDLRSVAAPA----- 470
Query: 421 VSWQPNEQQQEAADNL---VKMLDLAPSGKGEILQPELTPNPALE 462
P E DN+ V+ L L P + P PNP+L+
Sbjct: 471 ----PIVAPDELIDNMRVVVQQLQL-PKAQ---YDPRNYPNPSLQ 507
>gi|358373931|dbj|GAA90526.1| DSB repair complex subunit Ku70 [Aspergillus kawachii IFO 4308]
Length = 653
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 206/519 (39%), Gaps = 96/519 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y + + D+ V V+ L+ L GD D +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAQEVKELRALVDDD--GDSRDILAPAK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + + + L +ITD P D T + A+ +
Sbjct: 146 EQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK--TLRSAATVRAKDLYDL 203
Query: 156 GLRMK-----------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
G+ ++ + ++ S +P ++ D SK ++A +
Sbjct: 204 GVTIELFPISRPEHEFKNSKFYDDIIYKSSPNDPEAPAYLQTD------SKAATATGDGI 257
Query: 199 DSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKA 254
+L + +R + T F LEL KI V Y ++ + + +K
Sbjct: 258 SLLNTLLSSINSRTVPRRTHFSNMPLELGPDFKISVSGYILLRRQAPARNSFIWLNGEKP 317
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
TH S +D + V + K Y++G V S E +A++ E
Sbjct: 318 VVAKGVTTH---------SADDTGRNVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPV 368
Query: 315 VKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
++++GF + + ++H Y ++ +E ++ SAL + + K+A+V
Sbjct: 369 IRVIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQMLLRNKKMALVWF 424
Query: 370 VWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 423
+ R+G V+ ++ EK++ P + LPFA+D+R Q P + V+
Sbjct: 425 IARKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIR--QNPE-TTLNVAP 479
Query: 424 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P Q +++ L L P G + +P PNP+L+
Sbjct: 480 EPLIDQMRV---VIQQLQL-PKG---VYEPLRYPNPSLQ 511
>gi|317419163|emb|CBN81200.1| ATP-dependent DNA helicase 2 subunit 1 [Dicentrarchus labrax]
Length = 624
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 178/457 (38%), Gaps = 71/457 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTE+++
Sbjct: 46 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRSVYTSKIISSHRDLVALVFYGTEQSK 105
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N +++V V D+ VQ + L +G G L A +G GET
Sbjct: 106 NPRN----SFKYVYVYHDLDEPGAKRVQEVDAL-RGE-KGARLAAETMGS-------GET 152
Query: 117 YKGKKHLC---LITDALCPLK-----------DPDVG--TKEDQVSTIARQMVAFG--LR 158
G C L +D L +P G K+ Q T A + G +
Sbjct: 153 SLGDALWCCANLYSDIKLRLSHKRLMIFTCRDEPHRGDSAKDRQARTKASDLKETGVIID 212
Query: 159 MKNIVVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
+ +++ P R I+ E+++ L + + D L+ + ++
Sbjct: 213 LMHLMKPGGFDVAPFFRDIVSQPEDESELGLHLEP-------CDKLEDLQKRVRAKEQKK 265
Query: 216 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPT-LKKYSD-KAPSTDKFATHEVKVDYEYKS 273
+ R +L L E + + V +Y + P ++ Y + P K T ++
Sbjct: 266 RAMARLNLCLGEGINVAVGIYATAVTARKPAAIRLYRETNEPVRSKTRTFHMQTG----- 320
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
S ++P E + K YG + + + E +++K + + L+GF + H++++
Sbjct: 321 ----SLLLPSEIK-KAQTYGKKQIVMERDEVDSIKKFQDPGLYLIGFKPMEKLKTHHHIR 375
Query: 334 DVNLFIAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--- 389
E G + + + SAL E N A+ RCV R+ V L P E
Sbjct: 376 PAVFLYPEEGEVKGSACLFSALLMKCSERNVFALCRCVSRRNYPPRFVA-LVPQREEVDE 434
Query: 390 -KINI-PDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
K+ P F LP+A+D+R Q PS S+ V
Sbjct: 435 GKVQFTPPGFNVIYLPYADDLRTLDPPQCPSASQIQV 471
>gi|242817824|ref|XP_002487023.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713488|gb|EED12912.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 654
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 182/460 (39%), Gaps = 74/460 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM P K L+Q+++I +GV+ +G
Sbjct: 29 KDAILFAIDISDSMLMDRPSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFYG 88
Query: 52 TEETE--NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD---------- 97
TE + +E GG Y H + D++V D + V+SL+ L + +
Sbjct: 89 TEASRFYDEDENSCGGLSYPHCYLFTDLEVPDANDVKSLRALAEDDDEAEQILVSSKERV 148
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ ++ + + + ++ L +ITD+ P D T + A+ + G+
Sbjct: 149 SMANVLFCANQIFTSKASNFLSRR-LFIITDSDNPHADD--RTMRSAATVRAKDLYDLGV 205
Query: 158 -----------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ + ++ + G+P E ++ +A +
Sbjct: 206 IIELFPISRPDHEFDRSKFYDDIIYKTAPGDP------EASAFTAAGTQVPNASGDGISL 259
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPST 257
SL + +R + +F+ LE S KI V Y ++ P+ Y + P
Sbjct: 260 LNSLLSSVNSRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQE-PSRSCYVWLGGEKPEL 318
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
K T V +D ++ V + K Y++G + + ++ E ++ + +++
Sbjct: 319 AKGTTTHV--------ADDTARTVEKGEIRKAYKFGGEQISFTAEEQAKLRNFGDPVIRI 370
Query: 318 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S++ +K ++ +E +T SAL + + + K+ IV + R+
Sbjct: 371 IGFKPRSSLPIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARKNAT 430
Query: 377 SVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVRE 410
V+ +L EK++ +P + LPFA+D+R+
Sbjct: 431 PVLAAMLA--GEEKLDDNGVQFLPPGLWILPLPFADDIRQ 468
>gi|223996153|ref|XP_002287750.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976866|gb|EED95193.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1003
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASNILRH-YYMKDVNL 337
VP + R YR+G ++P+ + +K F +S++++G+ +++ M +
Sbjct: 427 VPLDSRTDAYRFGSDLIPVGKMDMLGIKAAFASPRSIEMIGYISKRDVISSGLCMGPAYV 486
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS- 396
+ + ++ A++AL+ AM+E R V + +GVL P +
Sbjct: 487 VLGGKESKKSRGAIAALSLAMEEKGVWGFCRFV-KSVNGDPCIGVLIPKLVGSDGGNGEG 545
Query: 397 ---FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
LPFA+D+ P+ P ++++ +A D+LV+ + L
Sbjct: 546 GRFLALLQLPFADDISHISTPA---VPAENWGDDKEAKACDSLVESMML 591
>gi|348502389|ref|XP_003438750.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
1 [Oreochromis niloticus]
Length = 610
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 174/455 (38%), Gaps = 67/455 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTEE++
Sbjct: 32 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGTEESK 91
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N ++HV V D+ VQ + L +G G L A +G GET
Sbjct: 92 NPRN----SFKHVYVYHDLSEPGAKRVQEVDAL-RGE-KGAKLAAETIGS-------GET 138
Query: 117 YKGKKHLC---LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
G C L +D L + + + R G +K+ R S
Sbjct: 139 SLGDALWCCANLYSDIKLRL------SHKRLMIFTCRDEPHGGDSVKDRQARTKASDLKE 192
Query: 174 MRVIIENDNLL------------NIFSKKSSAKTLFV-----DSTTSLRGARKTRDISPV 216
V+I+ +L+ +I S L + D L + +++
Sbjct: 193 TGVVIDLMHLMKPGGFDISLFFCDIVSPPEDESELGLQLQPSDKLEDLLKRVRAKELKKR 252
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSD-KAPSTDKFATHEVKVDYEYKSV 274
+ R +L L E + + V +Y + P ++K Y + P K T +
Sbjct: 253 ALARLNLCLGEGINVAVGIYATAVAARKPGSIKLYRETNEPVRSKTRTFHTQT------- 305
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK- 333
++ P + K YG + + + E +A+K + + L+GF + H++++
Sbjct: 306 ---GSLLLPSEIKKAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRP 362
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV---SEK 390
V L+ E ++ SAL + E N A+ R + R+ V +L N K
Sbjct: 363 AVFLYPEEDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGK 422
Query: 391 INI-PDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
+ I P F LPFA+D R QFPS S+ V
Sbjct: 423 VQITPPGFNVIYLPFADDFRTLDPPQFPSASQTQV 457
>gi|443723956|gb|ELU12174.1| hypothetical protein CAPTEDRAFT_158558 [Capitella teleta]
Length = 553
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
+ D ++V+ P+ K Y + + E +K + VKLLGF S++ + ++++
Sbjct: 254 LRDTAEVLMPQDMKKMQTYATKQICFEPEEITQIKKFDDPGVKLLGFKPKSSLKKMHHVR 313
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--- 389
L+ E +T +AL + + + VAI R RQ Q +V L P E
Sbjct: 314 PAQFLYPDETQIKGSTTLFTALLKKCLQRDVVAICRFTARQNQPPRIVA-LVPQEEELDE 372
Query: 390 -KINI-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
++ + P F+ +P+A+D R +F P + + +Q + A ++VK L
Sbjct: 373 HQVQVAPPGFHVIFMPYADDFRNLKFE--EGVP---RASTEQIDKAKSIVKKLRFT---- 423
Query: 448 GEILQPELTPNPALE 462
PE NP+L+
Sbjct: 424 ---FSPEGMENPSLQ 435
>gi|428174375|gb|EKX43271.1| hypothetical protein GUITHDRAFT_110686 [Guillardia theta CCMP2712]
Length = 227
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 2 ARTREALLLLLDVSPSM-HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
+ +E +++LDV M L +K S ++++ I+ + GV+L G ++ +
Sbjct: 3 GKAKEINIVILDVGRQMKEEELAIGKKFLSEFLRER-IFDPDMYAGVVLIGARGAKSFFS 61
Query: 61 KEVGG----YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDML 109
KE GG Y ++++L++++ + L++S+ +L +++D +VVG+D+L
Sbjct: 62 KEGGGDFEGYGNIRMLENVRKISSRLLESVSNLNLEQGNSNYVDGMVVGLDLL 114
>gi|336370987|gb|EGN99327.1| hypothetical protein SERLA73DRAFT_168812 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383742|gb|EGO24891.1| hypothetical protein SERLADRAFT_449625 [Serpula lacrymans var.
lacrymans S7.9]
Length = 647
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 103/529 (19%), Positives = 203/529 (38%), Gaps = 95/529 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +LL +D S SM + D K C L +KK+I G N +G++LF
Sbjct: 28 RDVILLCIDCSESMQELRDDPVYENVKTCHLLTALEAAVQIQKKKVIVGPNDSIGILLFN 87
Query: 52 T------EETENELTKEVGGYEHV------KVLQDIKVVDGH------LVQSL-----KH 88
T ++ +E+ K ++ + K+ + I+++D L Q+ K
Sbjct: 88 TTRQSDTKDHTSEIKKNTFAFQPITQISAPKIQELIQLLDAARDDPDVLKQTFPPLTGKK 147
Query: 89 LPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 148
+P G + + ++ G K + LITD P +P T
Sbjct: 148 IPMGD--------VFTSCNWFLRD-GAPKTASKRVFLITDEDNP--NPSSAQLLTSSRTT 196
Query: 149 ARQMVAFGLRMKNIVVRAS---LSGEPHMRVIIENDNLLNIFSKKSSA--KTLFVDSTTS 203
+ G++++ + ++ +DN+ + S +S +++ +
Sbjct: 197 LLDLTQSGVQVEPFFISTPDKPFDANKFYSSVLLSDNVNDEDSDESGVLPESISITRIDD 256
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
L + ++ +F E+++ + I + Y E+K + + D + +
Sbjct: 257 LLSQMRFHEVPKRALFSIPFEMAKGLVIGIKGYGLVTEQKKGAYRYFVDLGDRMEVACSR 316
Query: 264 EVKVDYEYKSVEDPSKVV----------PPEQRIKGYRYGPQVVPISSAEW----EAVKF 309
V +D + ++ D SK+V ++ +G ++VP + E F
Sbjct: 317 TVYLDEDQQAEIDKSKIVFGMSLGVPVTDETSDVEDNGFGTRIVPAGKRPFFDADEVRSF 376
Query: 310 KP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+ + +KLLGF D + ++H Y ++ E S + SAL + M
Sbjct: 377 RTLNLDPVIKLLGFKDKQELAFEDNVKHSYF----IYPDELKFSGSKRTFSALLKTMLAK 432
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSF 416
K+ + + R+ +L +EKI N P F+ LPFA+D+R
Sbjct: 433 GKIGLCIALTRRNASPTFCAMLPQ--AEKIEEGGWNEPPGFHVIPLPFADDIRA------ 484
Query: 417 SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
+ ++ +++ ++AA + L + K P+ PNPAL N
Sbjct: 485 APLEEGYRASDKIKDAARTWIDKLCV----KNGAYPPDSYPNPALAYHN 529
>gi|326475016|gb|EGD99025.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
tonsurans CBS 112818]
Length = 646
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 457
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 458 NPALE 462
NP+L+
Sbjct: 507 NPSLQ 511
>gi|348502391|ref|XP_003438751.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
2 [Oreochromis niloticus]
Length = 612
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 176/455 (38%), Gaps = 67/455 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTEE++
Sbjct: 34 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGTEESK 93
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N ++HV V D+ VQ + L +G G L A +G GET
Sbjct: 94 NPRN----SFKHVYVYHDLSEPGAKRVQEVDAL-RGE-KGAKLAAETIGS-------GET 140
Query: 117 YKGKKHLC---LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
G C L +D L + + + R G +K+ R S
Sbjct: 141 SLGDALWCCANLYSDIKLRL------SHKRLMIFTCRDEPHGGDSVKDRQARTKASDLKE 194
Query: 174 MRVIIENDNLL------------NIFSKKSSAKTLFV-----DSTTSLRGARKTRDISPV 216
V+I+ +L+ +I S L + D L + +++
Sbjct: 195 TGVVIDLMHLMKPGGFDISLFFCDIVSPPEDESELGLQLQPSDKLEDLLKRVRAKELKKR 254
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSD-KAPSTDKFATHEVKVDYEYKSV 274
+ R +L L E + + V +Y + P ++K Y + P K T +
Sbjct: 255 ALARLNLCLGEGINVAVGIYATAVAARKPGSIKLYRETNEPVRSKTRTFHTQTG------ 308
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK- 333
S ++P E + K YG + + + E +A+K + + L+GF + H++++
Sbjct: 309 ---SLLLPSEIK-KAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRP 364
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV---SEK 390
V L+ E ++ SAL + E N A+ R + R+ V +L N K
Sbjct: 365 AVFLYPEEDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGK 424
Query: 391 INI-PDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
+ I P F LPFA+D R QFPS S+ V
Sbjct: 425 VQITPPGFNVIYLPFADDFRTLDPPQFPSASQTQV 459
>gi|242817832|ref|XP_002487024.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713489|gb|EED12913.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 661
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 182/460 (39%), Gaps = 74/460 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM P K L+Q+++I +GV+ +G
Sbjct: 36 KDAILFAIDISDSMLMDRPSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFYG 95
Query: 52 TEETE--NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD---------- 97
TE + +E GG Y H + D++V D + V+SL+ L + +
Sbjct: 96 TEASRFYDEDENSCGGLSYPHCYLFTDLEVPDANDVKSLRALAEDDDEAEQILVSSKERV 155
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ ++ + + + ++ L +ITD+ P D T + A+ + G+
Sbjct: 156 SMANVLFCANQIFTSKASNFLSRR-LFIITDSDNPHADDR--TMRSAATVRAKDLYDLGV 212
Query: 158 -----------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ + ++ + G+P E ++ +A +
Sbjct: 213 IIELFPISRPDHEFDRSKFYDDIIYKTAPGDP------EASAFTAAGTQVPNASGDGISL 266
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPST 257
SL + +R + +F+ LE S KI V Y ++ P+ Y + P
Sbjct: 267 LNSLLSSVNSRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQE-PSRSCYVWLGGEKPEL 325
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
K T V +D ++ V + K Y++G + + ++ E ++ + +++
Sbjct: 326 AKGTTTHV--------ADDTARTVEKGEIRKAYKFGGEQISFTAEEQAKLRNFGDPVIRI 377
Query: 318 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S++ +K ++ +E +T SAL + + + K+ IV + R+
Sbjct: 378 IGFKPRSSLPIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARKNAT 437
Query: 377 SVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVRE 410
V+ +L EK++ +P + LPFA+D+R+
Sbjct: 438 PVLAAMLAGE--EKLDDNGVQFLPPGLWILPLPFADDIRQ 475
>gi|326483178|gb|EGE07188.1| Ku70 protein [Trichophyton equinum CBS 127.97]
Length = 668
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVRE 410
LPFA+D+R+
Sbjct: 460 PLPFADDIRQ 469
>gi|302667955|ref|XP_003025556.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
gi|291189670|gb|EFE44945.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
Length = 651
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQKKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVRE 410
LPFA+D+R+
Sbjct: 460 PLPFADDIRQ 469
>gi|254749400|dbj|BAH86596.1| putative Ku70 protein [Magnaporthe grisea]
gi|440476434|gb|ELQ45031.1| hypothetical protein OOU_Y34scaffold00022g19 [Magnaporthe oryzae
Y34]
gi|440489081|gb|ELQ68761.1| hypothetical protein OOW_P131scaffold00219g18 [Magnaporthe oryzae
P131]
Length = 625
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 332
V D S+ V + K Y++G + ++ E +K ++++GF S I + +
Sbjct: 299 VSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMIPQWASIK 358
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSE 389
K +F AE + +T SAL + + + +KV + V R V+V ++ P+ E
Sbjct: 359 KSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPSKRPSDEE 418
Query: 390 KIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPFA+D+RE K P E+ +V L L P G
Sbjct: 419 SGTKFLPAGLWLCTLPFADDLRETDKRDVIKAP------EELTAKMRKVVGNLHL-PKG- 470
Query: 448 GEILQPELTPNPALE 462
P PNPAL+
Sbjct: 471 --TYDPARYPNPALQ 483
>gi|302507648|ref|XP_003015785.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
gi|291179353|gb|EFE35140.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
Length = 627
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQKKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVRE 410
LPFA+D+R+
Sbjct: 460 PLPFADDIRQ 469
>gi|389633665|ref|XP_003714485.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
gi|351646818|gb|EHA54678.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
Length = 644
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 332
V D S+ V + K Y++G + ++ E +K ++++GF S I + +
Sbjct: 318 VSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMIPQWASIK 377
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSE 389
K +F AE + +T SAL + + + +KV + V R V+V ++ P+ E
Sbjct: 378 KSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPSKRPSDEE 437
Query: 390 KIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPFA+D+RE K P E+ +V L L P G
Sbjct: 438 SGTKFLPAGLWLCTLPFADDLRETDKRDVIKAP------EELTAKMRKVVGNLHL-PKG- 489
Query: 448 GEILQPELTPNPALE 462
P PNPAL+
Sbjct: 490 --TYDPARYPNPALQ 502
>gi|390934412|ref|YP_006391917.1| DNA repair protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569913|gb|AFK86318.1| DNA repair protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 269
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V E+ ++GY Y P + V I + E + K++ ++ FTD I Y+ D
Sbjct: 52 NKEVSDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYF--DRT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSRQDLACIRVFNDNYMVMETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|121535194|ref|ZP_01667009.1| Ku domain protein [Thermosinus carboxydivorans Nor1]
gi|121306185|gb|EAX47112.1| Ku domain protein [Thermosinus carboxydivorans Nor1]
Length = 275
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 281 VPPEQRIKGYRYGPQ-VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP EQ +KGY PQ V +++ E EA+ K +++++ F + I Y+ + L +
Sbjct: 56 VPNEQIVKGYEISPQRYVIVTTEELEALNPKASRTIEIEDFVNLDQIDPIYFEQSYYL-V 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV-------GVLTPNVSEKI- 391
+ G +A + L +AMK+ KVAI R V R Q V + + T + +++I
Sbjct: 115 PDKGAGKA---YTLLLQAMKQAGKVAIARVVLRNKQYLVTIRPAGKALSLATMHYADEIV 171
Query: 392 ------NIPDSFYFNVLPFAEDVREFQFPS--FSKFPVSWQPNEQQQEAADNLVKMLDLA 443
+PD+ ++ P + RE + P + + E + +++M++
Sbjct: 172 SLEELEGLPDT---DIKP---NQRELTMAEKLIESLAADFNPAKYRDEHREKVLEMIERK 225
Query: 444 PSGKGEILQP 453
G+ ++QP
Sbjct: 226 AEGETVVVQP 235
>gi|410896180|ref|XP_003961577.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 608
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS 278
R +L L E + + V +Y K P ++K Y + T+K H ++ ++
Sbjct: 254 RLNLSLGEGLNLAVGIYAMAVPAKIPGSVKLYRE----TNK-QVHSKPQTFDTQT----G 304
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 338
+++ P + K YG + + + E +++K + + L+GF + H++++
Sbjct: 305 RLLLPSEIKKAQVYGKKQIVMERDEVDSIKKFEDPGLYLIGFKPIKMLKIHHHIRPAVFI 364
Query: 339 IAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE------KI 391
E + + + SAL E + A+ RC+ R+ L P E +I
Sbjct: 365 YPEENMVKGSSCLFSALLTKCSEKDVFALCRCIIRRNCPP-RFAALVPQKEELDEGKVQI 423
Query: 392 NIPDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
P F+ LP+A+D+R QFPS S+ PV
Sbjct: 424 TAP-GFHLIYLPYADDIRTLDPPQFPSASQIPV 455
>gi|296133062|ref|YP_003640309.1| Ku protein [Thermincola potens JR]
gi|296031640|gb|ADG82408.1| Ku protein [Thermincola potens JR]
Length = 281
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 264 EVKVDYEYKSVEDPSK----------VVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPE 312
+VK +Y ++ + P K VPPE+ ++GY Y + V + ++E + +
Sbjct: 28 DVKFNYLHEKCKTPIKYERICPTCDTTVPPEEIVRGYEYEKGRYVILRDEDFEKLPLETA 87
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
+S+ ++ F + I Y+ D + ++A PG+ A L AMKE NK+AI + V R
Sbjct: 88 RSIDIIDFVELEEIDPIYF--DKSYYLA-PGDG-GQKAYELLKSAMKEANKIAIAKVVIR 143
Query: 373 QGQQSVVVGV 382
+ V + V
Sbjct: 144 SKEAIVALRV 153
>gi|167522283|ref|XP_001745479.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775828|gb|EDQ89450.1| predicted protein [Monosiga brevicollis MX1]
Length = 1236
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 49/256 (19%)
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+D TTS ++ R P L+L+E M I V VY + T KYS
Sbjct: 878 LLDRTTSRVQKKRARMTIP-------LQLAEGMAIGVKVYNLVSQ---ATKGKYSYVYND 927
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
T T K Y ++ +P ++P + + G ++G ++ S E +K + ++
Sbjct: 928 TQPVVT---KTAYYCENTTNP--LLPTDMKY-GAKFGNEMAVFSKEEVTQIKSFGQPGLR 981
Query: 317 LLGFTDASNILRHYYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
LLGF D + + +++K + G SR + K+AI V R G
Sbjct: 982 LLGFKDQAALKPWHHVKKSCFLYPDDKAGGSRCL-----------RLRKLAICLFVSRAG 1030
Query: 375 QQSVVVGVL------TPNVSEKINIPDSFYFNVLPFAEDVRE----FQFPSFSKFPVSWQ 424
+V +L + E+++ P F+ LP+AED+RE F P
Sbjct: 1031 VPPNMVALLPQAEKVAEDSHEQVS-PPGFHVIFLPYAEDLREVNVDFDLP---------H 1080
Query: 425 PNEQQQEAADNLVKML 440
+ Q +AA LV+ L
Sbjct: 1081 ADADQIKAATGLVRSL 1096
>gi|304316199|ref|YP_003851344.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777701|gb|ADL68260.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 269
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
++ V E+ ++GY Y P + V I + E + K++ +L FTD + I Y+ D
Sbjct: 52 NRQVSDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDILDFTDLNKIDPIYF--DKT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVYNDNYMVLETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|327298311|ref|XP_003233849.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
gi|326464027|gb|EGD89480.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
Length = 646
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDDNGEQTIPPGMWIL 459
Query: 401 VLPFAEDVRE 410
LP+A+D+R+
Sbjct: 460 PLPYADDIRQ 469
>gi|322695392|gb|EFY87201.1| ku70 protein [Metarhizium acridum CQMa 102]
Length = 645
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E ++++ ++++GF + +
Sbjct: 322 AEDSTRTVEKGEMKKAYKFGGEYVYFTPDEQKSLRDFGPPVIRIIGFKPRKLLPIWASVK 381
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + NK+ I C+ R Q ++ ++ + +
Sbjct: 382 KSTFIFPSEEDFVGSTRVFTALWQKLIKDNKIGIAWCIVRSNSQPILAAIVPSRERSDDK 441
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LPFA+D+RE + P Q +++ + +V+ L L +
Sbjct: 442 SGTPYLPAGLWIYPLPFADDLREIKPPDGVM-----QSSDELKTQMRTIVQQLQLPKA-- 494
Query: 448 GEILQPELTPNPALE 462
+ P PNPAL+
Sbjct: 495 --MYNPLKYPNPALQ 507
>gi|340504921|gb|EGR31314.1| ku p70 DNA helicase, putative [Ichthyophthirius multifiliis]
Length = 542
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNL 337
+++ P Q + G + V ISS + + +K E S+ L+GF S + + H Y +
Sbjct: 309 QILYPNQISQCIILGGEKVRISSKDVQKMKHFQEPSMTLIGFKPLSQLKVYHNYRPSYFV 368
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---EKINIP 394
+ + ++ AL MK NK+AIVR ++G Q +L + + + P
Sbjct: 369 YPDDFQVKGSSQFFHALITQMKAKNKIAIVRFQPKRGSQVRFCALLPQEEAYDEDHVQQP 428
Query: 395 DSFYFNVLPFAEDVREF 411
FY LP+++D+R+
Sbjct: 429 PGFYLISLPYSDDMRDL 445
>gi|281203251|gb|EFA77451.1| hypothetical protein PPL_12053 [Polysphondylium pallidum PN500]
Length = 118
Score = 45.1 bits (105), Expect = 0.087, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
+ ++ P + A A+S+L M E+ + + R V R G+ S + +L P++ +
Sbjct: 1 MMVSPPADKVARSALSSLIHGMSEIKQALLSRYVKRNGR-SASISLLYPHIKANY---EC 56
Query: 397 FYFNVLPFAEDVREFQF----PSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
Y LPF +D++++QF P+ + + P +Q +AA L+ +DL
Sbjct: 57 IYVCQLPFLDDLKQYQFSPIVPTNAATRKPFIPTAEQVDAARALIDSMDL 106
>gi|315041481|ref|XP_003170117.1| Ku70 protein [Arthroderma gypseum CBS 118893]
gi|311345151|gb|EFR04354.1| Ku70 protein [Arthroderma gypseum CBS 118893]
Length = 646
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E ++++GF S++ MK ++ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAELRNFGEPIIRIIGFKPLSSLPIWASMKHPTFIYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + NK+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQNKMALVWFVPRRNAAPVMAAMIA--GEEKLDDNDIQIIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLA-----PSGKGEILQPE 454
LPFA+D+R+ P A D+LV KM + P G+ P
Sbjct: 460 PLPFADDIRQ-------------NPELNHISAPDSLVDKMRTIIQQLQLPKGQ---FDPH 503
Query: 455 LTPNPALE 462
PNP+L+
Sbjct: 504 RYPNPSLQ 511
>gi|333370783|ref|ZP_08462761.1| Ku family DNA end-binding protein [Desmospora sp. 8437]
gi|332977070|gb|EGK13874.1| Ku family DNA end-binding protein [Desmospora sp. 8437]
Length = 270
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP E+ +KGY Y Q V + E EA+ + K++++L F I YY K L
Sbjct: 55 VPWEEVVKGYEYADNQFVLMKKEELEAILPENRKAIEILDFVKLEEIDPIYYDKSYYLGP 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN-VSEKINIPD 395
E GN A S L AM E K+ + + R Q VV V V E I PD
Sbjct: 115 GEHGNH----AYSLLRDAMAETGKIGVAKITIRSKQSLAVVRVHQSCLVMETIFYPD 167
>gi|339444943|ref|YP_004710947.1| hypothetical protein EGYY_13950 [Eggerthella sp. YY7918]
gi|338904695|dbj|BAK44546.1| uncharacterized ACR [Eggerthella sp. YY7918]
Length = 283
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 272 KSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
K+ D + + P+ +KGY+Y G VV IS E +++K + ++SVK++ F+D S +
Sbjct: 45 KTCPDCKRELGPDDIVKGYQYEKGKYVV-ISDDELDSLKTEADRSVKIVQFSDLSEVPPL 103
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
Y+ K + +A+ G + A+ L RAM E K+AI
Sbjct: 104 YFEKPYQV-VAQSGGEK---ALELLHRAMAEEGKIAI 136
>gi|335428738|ref|ZP_08555648.1| Ku protein [Haloplasma contractile SSD-17B]
gi|335430878|ref|ZP_08557764.1| Ku protein [Haloplasma contractile SSD-17B]
gi|334887418|gb|EGM25750.1| Ku protein [Haloplasma contractile SSD-17B]
gi|334891679|gb|EGM29925.1| Ku protein [Haloplasma contractile SSD-17B]
Length = 255
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 287 IKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
IKGY+Y + + ++E +K +K+++++ F DAS I YY D + ++ G
Sbjct: 61 IKGYQYEDNKYITFDDDDFEKIKSNRDKTIQIMQFVDASEIDSIYY--DKSYYVVPEGGE 118
Query: 346 RATVAVSALARAMKEMNKVAIVRCV 370
+ A L RA+ E NKV I + V
Sbjct: 119 K---AFEVLRRALSESNKVGIAKAV 140
>gi|388583769|gb|EIM24070.1| ATP-dependent DNA helicase ii [Wallemia sebi CBS 633.66]
Length = 653
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 198/500 (39%), Gaps = 84/500 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE----------------KLCSRLIQKKLIYGKNHEVGV 47
TR+A L ++D + M P + R +++K + VGV
Sbjct: 23 TRDASLFVIDAAAGMQEYPPSQDPNDRIDEEMPLLHRTFDAILRCLKRKAFNSSDDLVGV 82
Query: 48 ILFGTEETENELTKEVGGY-EHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFL------- 99
I++ TEET+ + KE EHV LQ I+ ++G+ +++LK L G+ A L
Sbjct: 83 IIYNTEETKPD--KEGSDVKEHVYCLQPIEQLNGNNIRNLKKLVDGSRADPELLSRKFKP 140
Query: 100 ------------DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST 147
+ + + + +T K + IT C +P ED ++
Sbjct: 141 AVFENNRTSMPIGNLYISCNRFFRNNPQTKNASKRIFHIT---CN-DEPQKNAPEDWLT- 195
Query: 148 IARQMVAFGLRMKNIVVR----ASLSGEPHMRVIIENDNLL-NIFSKKSSAKTLFVDST- 201
A + A L I++ A S + ++ + I KK + + + S
Sbjct: 196 -ASRTNASDLLESEIIIEPFFIAPSSSDFDIKTSFDVKKFYAQILPKKENNEDVTDPSMG 254
Query: 202 ------TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 255
+L + +I T F EL + I V Y+ ++KF ++
Sbjct: 255 EGFAKFDNLEEKLRKLEIPKRTSFTHMFELGDNFSISVKGYRTVVDQKFFPYVMVAENKK 314
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQ------VVPISSAEWEAVK- 308
+ E ++ E+ E + P + +G+ G + V+P ++ + +++
Sbjct: 315 GELEQTEKETRLQDEFTLNE-----ITPSEIKQGFVLGDKSSDGALVIPCNTQTYNSIRT 369
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
F +KLLGF D + + + + ++ E +T SAL ++ ++ K+A+V
Sbjct: 370 FDLPVGLKLLGFQDIDTLSPLHNVGTASFIYPTEDLIEGSTRTFSALLKSCLKLKKLALV 429
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKIN-------IPDSFYFNVLPFAEDVREFQFPSFSKFP 420
R V R+ ++ +L E I+ P+ FY LPFA+D+R P
Sbjct: 430 RTVMRKNAAPIISALLP--QEEVIDSDDGSQITPNGFYLIPLPFADDLR--SVPQIENM- 484
Query: 421 VSWQPNEQQQEAADNLVKML 440
+ N++Q EAA +K L
Sbjct: 485 ---KANDEQTEAAGRWLKKL 501
>gi|346977166|gb|EGY20618.1| Ku70 [Verticillium dahliae VdLs.17]
Length = 646
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMK 333
ED ++ V + K Y++G + + S + + K ++++GF + I K
Sbjct: 321 EDTARTVEKSETKKAYKFGGEYIYFSPEDQKRAKDFGPPIIRIIGFKTRAQIPFWASVKK 380
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS-EKIN 392
+F +E +T SAL + + + NKVAI C+ R V+ ++ + S E+ N
Sbjct: 381 STFIFPSEEDFVGSTRVFSALWQKLLKSNKVAIAWCIIRANATPVLSAIIPSHESTEESN 440
Query: 393 ----IPDSFYFNVLPFAEDVR 409
+P + LPFA+D+R
Sbjct: 441 ATPFLPAGLWLCPLPFADDLR 461
>gi|4630797|dbj|BAA76953.1| human Ku70 autoantigen homologue [Xenopus laevis]
Length = 611
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 165/438 (37%), Gaps = 52/438 (11%)
Query: 5 REALLLLLDVSPSMHSVLP------DVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETEN 57
R++L+ L+D S M + D+ C R + I +H++ V+ FGT E+ N
Sbjct: 34 RDSLIFLVDASKPMFESIDGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFFGTRESTN 93
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDM-------LI 110
++H+ VL D+ + L + F D I G D L
Sbjct: 94 -----CDPFKHLCVLHDLDTPGAKRILDLDKYKEEKGRALFCDTIGCGGDFSLGEALWLC 148
Query: 111 KKYGETYKGK---KHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K K K + L T+ P DP + + + M F L + ++
Sbjct: 149 SNLFSNVKVKMSHKRIILFTNEDNPHANDPAKAKQARAKAEDLKDMGIF-LDLMHLEKPG 207
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R I+ E+++L+ F K+S K + + ARK + R +L
Sbjct: 208 GFDISLFYRDIVNTAEDEDLVVQF--KASEKLDDLLKKVRAKEARKR------ALSRLNL 259
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
+L + + V VY + K PT++ Y + + VK S ++P
Sbjct: 260 KLGPDVGLTVGVYNLVQKAVKPPTVRLYRE--------SNEPVKTKTRIFHSNTGSLLLP 311
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
+ + + YG + + + E E +K E + L+GF S + +H++ + E
Sbjct: 312 SDTK-RSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFIYPEE 370
Query: 343 G-NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDS 396
+ +T +AL +AI R R+ V L P E + P
Sbjct: 371 SIITGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNMQSAPSG 429
Query: 397 FYFNVLPFAEDVREFQFP 414
F LPFA+D+R+ P
Sbjct: 430 FNLVCLPFADDIRKLDTP 447
>gi|168058549|ref|XP_001781270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667252|gb|EDQ53886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 606
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
+K++ Y + + + P +R + Y+ G +VV S + +K ++LLGF S
Sbjct: 295 LKIERTYICSDTGALMHEPLKRFEEYQ-GKKVV-FSVDDVSDIKRISSVQLRLLGFKSMS 352
Query: 325 NILRHYYMKDVNLFIA--EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L+ Y+ + FI E +T A AL RAM +NK A+ C+ + +V V
Sbjct: 353 -CLQPYHNLRPSTFIYPDEVAVKGSTCAFIALHRAMVRLNKYALA-CLSSRATFQLVALV 410
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
+ N + Y LP+++D+R + S P+S + +E+Q E A +L+K L L
Sbjct: 411 AQEEEGDSTNGMNVIY---LPYSDDIRPAEKYHTSISPIS-KASEEQVEMATDLIKKLHL 466
Query: 443 APSGKGEILQPEL 455
+I P L
Sbjct: 467 KNFSVTDIQDPAL 479
>gi|317490488|ref|ZP_07948969.1| Ku protein [Eggerthella sp. 1_3_56FAA]
gi|325831541|ref|ZP_08164795.1| Ku protein [Eggerthella sp. HGA1]
gi|316910426|gb|EFV32054.1| Ku protein [Eggerthella sp. 1_3_56FAA]
gi|325486795|gb|EGC89243.1| Ku protein [Eggerthella sp. HGA1]
Length = 274
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKF 309
D A ++ A +K K+ D + + PE +KGY+Y G VV + E +A+K
Sbjct: 25 DDAVRFNQLAKDSMKRVRYVKTCPDCKRELKPEDIVKGYQYEKGKYVV-VDDEELDAIKT 83
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
++++K++ F+D + Y+ K + +A+PG + A+ L RAM + K+AI
Sbjct: 84 DADRAMKIVQFSDIDEVPPLYFEKPYQV-VAQPGGEK---ALELLRRAMVDEGKIAI 136
>gi|302881903|ref|XP_003039862.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
gi|256720729|gb|EEU34149.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
Length = 1793
Score = 44.3 bits (103), Expect = 0.13, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMK 333
ED ++ V + K Y++G + V + E +++K ++++GF S + + K
Sbjct: 322 EDSARTVEKGETKKAYKFGGEYVYFTPDEQKSLKDFGSPIIRIIGFKSRSQLPIWASVKK 381
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNVS 388
+F +E +T +AL + + + +K+ + C+ R Q ++ ++ + + S
Sbjct: 382 STFIFPSEEDFVGSTRVFTALWQKLLKDDKIGLAWCITRANAQPILAAIIPSRERSDDES 441
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
+P + LPF +D+R P + +++ + +V+ L L +
Sbjct: 442 GTPYLPAGLWIYPLPFLDDLRSINPPG-----EVVRSSDELKTQMRTIVQQLQLPKA--- 493
Query: 449 EILQPELTPNPALE 462
+ P PNPAL+
Sbjct: 494 -MYNPSKYPNPALQ 506
>gi|308487536|ref|XP_003105963.1| CRE-CKU-80 protein [Caenorhabditis remanei]
gi|308254537|gb|EFO98489.1| CRE-CKU-80 protein [Caenorhabditis remanei]
Length = 722
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 33/206 (16%)
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS----SAEWEAVKF 309
A S KF K YK+VE+ + + GY +G V+ + ++ F
Sbjct: 285 ADSASKFLPKNAK---NYKAVENI-------KTMHGYNFGKSVIMMDPEYLKEKYNDHNF 334
Query: 310 KPEKS---VKLLGFTDASNILRHYYMKDVNLFIAEPG----NSRATVAVSALARAMKEMN 362
++ +KL+ FT +NIL Y + D + P S AT A AL AM +
Sbjct: 335 NEGQTGGVLKLIQFTKKANILDSY-LADASAKTVLPSLNSPTSGATKATVALIEAMLSLR 393
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDVREFQFPSFSKFP 420
AI R + +V +L P+ E + Y LPF++D+R +FP FS F
Sbjct: 394 VAAICRYTFHAKSHVQIVALL-PHRDEDTGV---VYLRSVKLPFSDDMRTLKFPKFS-FD 448
Query: 421 V----SWQPNEQQQEAADNLVKMLDL 442
S +P Q D+L+ + L
Sbjct: 449 EDEVDSNKPTVAQLSVVDDLIDCMQL 474
>gi|440633573|gb|ELR03492.1| hypothetical protein GMDG_01243 [Geomyces destructans 20631-21]
Length = 644
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 102/503 (20%), Positives = 193/503 (38%), Gaps = 68/503 (13%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL-----------CS-RLIQKKLIYGKNHEVGVILF 50
++A+L ++VSPSM H D +K C+ +++Q+++I +G++LF
Sbjct: 31 KDAILFAIEVSPSMLTHPPASDSKKADTDSPAAAALKCAYQIMQQRIISNPKDMIGILLF 90
Query: 51 GTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHL------------PQGTCAG 96
GT E++ G Y H+ +L D+ V V++LK L P A
Sbjct: 91 GTAESKGPEDNAASGIAYPHIYLLTDLDVPAASDVKALKELVEDEEAAKEVLVPAPEGAE 150
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
+ ++ + + ++ G + L +ITD DP K + + R +
Sbjct: 151 VTMSNVLFCANQIFTTRAPSF-GSRRLFMITDR----DDPHESDKGMRAAAAVRAKDLYD 205
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLN-------IFSKKSSAKTLFVDSTTSLRGARK 209
L + + G R +D + + ++A + SL
Sbjct: 206 LGVVIELFPIERGGAVFDRSKFYDDVIYRDSTDTDTPSTTNAAAGADGISLLNSLISNIN 265
Query: 210 TRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
++ I +F E+ + I V Y +K P Y + T + AT E
Sbjct: 266 SKQIPKRALFSNLPFEIGPGLTISVKGYNILQRQK-PARSCYVWLSGETAQIATGETT-- 322
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
D ++ V K Y++G + V + E + +K ++++GF L
Sbjct: 323 ---HLAADTTRTVQKVDVKKAYKFGGEQVLFTKDEQKELKNFGPPGLRIVGFK--PQTLL 377
Query: 329 HYYM---KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV--- 382
YY K L+ +E +T + L + + + + + + + R + +
Sbjct: 378 PYYASVNKSTFLYPSEEDYVGSTRVFATLWQKLLDSSTMGVAWYIPRANANPQYIALLPS 437
Query: 383 ---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
L P S++I +P + LP A+D+R P+ P+ PN + +++
Sbjct: 438 RERLDPATSQQI-VPAGLWAYPLPCADDLR---VPAPGPAPIV-SPN-ALTDKMHVVIQQ 491
Query: 440 LDLAPSGKGEILQPELTPNPALE 462
L L G + +P PNPAL+
Sbjct: 492 LQL----PGAVFEPSRYPNPALQ 510
>gi|358342906|dbj|GAA53379.1| cystathionine beta-synthase [Clonorchis sinensis]
Length = 1905
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 169 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEK 228
+G P +V + +++S+ + F ++ +L +TR ++ ++ D ++ +
Sbjct: 1679 NGNPQFKVHSAQKAIGDLWSQLNGESYTFDEAIPAL-AYFETRAVTQRG-WKVDFQIGDS 1736
Query: 229 MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK 288
+ + V + + E + PTL + PST ++ Y + ++ + Q I+
Sbjct: 1737 LSLPVEGFTQVREARPPTLTQLYAACPST------PIRAITTYCTQDENVTELQSTQIIR 1790
Query: 289 GYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
G+RYG +VP + + V+ EK L+GFT AS +
Sbjct: 1791 GHRYGNTMVPFTPEDKAVVQPAAEKCRTLIGFTPASTFI 1829
>gi|350636255|gb|EHA24615.1| hypothetical protein ASPNIDRAFT_48713 [Aspergillus niger ATCC 1015]
Length = 639
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 193/486 (39%), Gaps = 88/486 (18%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K +Q+++I +GV+LFGT+ + E+E ++ Y + + D+ V H
Sbjct: 50 KCAYHFMQQRIISNPQDMMGVLLFGTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHE 109
Query: 83 VQSLKHLPQGTCAGDF------------LDAIVVGVDMLIKKYGETYKGKKHLCLITDAL 130
V+ L+ L GD + ++ + + + ++ L +ITD
Sbjct: 110 VKELRALVDDE--GDSREVLSPAKEQVSMANVLFCANQIFTSRAPNFLSRR-LFIITDND 166
Query: 131 CPLKDPDVGTKEDQVSTIARQMVAFGLRMK-----------------NIVVRASLSGEPH 173
P D T + A+ + G+ ++ + ++ SL +P
Sbjct: 167 NPHGDDK--TLRSAATVRAKDLYDLGVTIELFPISRPEHEFKNSKFYDDIIYKSLPSDPE 224
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIK 232
+++D SK ++A + +L + +R + T F LEL +I
Sbjct: 225 APAYLQSD------SKAATATGDGISLLNTLLSSINSRTVPRRTHFSNMPLELGPDFRIS 278
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-----VKVDYEYKSVEDPSKVVPPEQRI 287
V Y L++ +AP+ + F V S +D + V +
Sbjct: 279 VSGYI--------LLRR---QAPARNSFIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIR 327
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEP 342
K Y++G V S E +A++ E ++++GF + + ++H Y ++ +E
Sbjct: 328 KAYKFGGDQVTFSPDEQKALRDFGEPVIRVIGFKPITALPFWANVKHPYF----IYPSEE 383
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDS 396
++ SAL + + K+A+V + R+G V+ ++ EK++ P
Sbjct: 384 DYVGSSRVFSALHQTLLRSKKMALVWFIARKGAGPVLAAMIA--GEEKLDENGVQKYPPG 441
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT 456
+ LPFA+D+R+ + + P E + +V+ L L P G + +P
Sbjct: 442 MWILPLPFADDIRQNPETTLNVAP------ESLIDQMRVVVQQLQL-PKG---VYEPLKY 491
Query: 457 PNPALE 462
PNP+L+
Sbjct: 492 PNPSLQ 497
>gi|407918739|gb|EKG12005.1| DNA-binding SAP [Macrophomina phaseolina MS6]
Length = 660
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 5 REALLLLLDVSPSM-HSVLPDVEKLCSR-------------LIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM LP K R L+Q+++I N +GV+LF
Sbjct: 33 KDAVLFAIDVSHSMMKKPLPSDSKKADRDSPTSAALKCAYQLMQQRIISHPNDMMGVLLF 92
Query: 51 GTEET--ENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ 91
GTE++ ++E GG Y H +L D+ V + V+ L++L Q
Sbjct: 93 GTEQSKFQDEGANGRGGLQYPHCYLLTDLDVPAANDVKRLRNLVQ 137
>gi|17552754|ref|NP_497899.1| Protein CKU-80 [Caenorhabditis elegans]
gi|3878947|emb|CAA83623.1| Protein CKU-80 [Caenorhabditis elegans]
Length = 728
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 289 GYRYGPQVVPISSAEWEAVKFKPEK--------SVKLLGFTDASNILRHYYMKDVNLFIA 340
GY +G V+ + E+ K+ +KL+ FT +NIL Y + D +
Sbjct: 318 GYNFGKSVI-MMDPEYLKEKYNDHNFNEGQTGGVLKLIQFTKRANILDSYLL-DASAKTV 375
Query: 341 EPG----NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
P S AT A +L AM + AI R + ++ +L P+ E+ +
Sbjct: 376 LPALNSPKSGATKATVSLIEAMLSLRVAAICRYTFHAKSHVQLIALL-PHQDEETGV--- 431
Query: 397 FYFNV--LPFAEDVREFQFPSFS 417
FY LPF++D+R +FP FS
Sbjct: 432 FYLRSVKLPFSDDMRTLKFPKFS 454
>gi|384487999|gb|EIE80179.1| hypothetical protein RO3G_04884 [Rhizopus delemar RA 99-880]
Length = 572
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 136/355 (38%), Gaps = 59/355 (16%)
Query: 5 REALLLLLDVSPSMH--------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+E +L ++D +P+M V EK+ S ++ K ++ +VG++LFGT E +
Sbjct: 29 KECILFVIDCNPTMFIKDEKGDIPVKSAFEKIRSSMLSK-VLNQPTDQVGIVLFGTREKQ 87
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGH-------LVQSLKHLPQGTCAGDF----LDAIVVG 105
N E V VLQ I + D +Q++ L + D+ D V
Sbjct: 88 N-----ATDNESVYVLQTIDIPDASRIKEIDGFIQNISTLHDKYRSIDWEFPMSDLFWVC 142
Query: 106 VDMLIKKYGETYKGKKHLCLITDALCPLKDPD------VGTKEDQVSTIARQMVAFGLRM 159
D ++ K + LIT+ P ++ D V +D ++T ++ FGL+
Sbjct: 143 SDAFFGRFSAPKYSAKRMFLITNNDNPHQNNDAIRQSSVQRAKDLITT-GVEIRLFGLQK 201
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 219
N SL I +D + FS + L K++ + F
Sbjct: 202 DNKPFNPSL-----FYNAILDDPTSDSFSCHPKLE--------QLEAIVKSKRAKSRSQF 248
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE---- 275
L+LS+ + I V Y E++ T K F T E +V +
Sbjct: 249 HLPLKLSDHLSIGVTGYNMIIEQRISTAKY----------FYTAEDEVKEAIGTTRWICV 298
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY 330
D ++ + + YG + + S E E ++ E + LLGF D + HY
Sbjct: 299 DTNQPLTRMDIDYAFNYGGEKIIFSKKELEDIQTLSEPGILLLGFRDIKELEPHY 353
>gi|269957016|ref|YP_003326805.1| Ku protein [Xylanimonas cellulosilytica DSM 15894]
gi|269305697|gb|ACZ31247.1| Ku protein [Xylanimonas cellulosilytica DSM 15894]
Length = 274
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 43/194 (22%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYMK 333
KVVP E K Y G V ++ + + + ++ ++++ F + I R YY+
Sbjct: 53 KVVPYEHIDKAYDDGEHTVVLTKDDLSGLPAERDREIEVVEFVPSDQIDPIMLDRTYYL- 111
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
EP +S++T A L R ++E ++ A+V+ RQ + + V
Sbjct: 112 -------EP-DSKSTKAYVLLRRTLEETDRTAVVKFALRQRTRLAALRVRG--------- 154
Query: 394 PDSFYFNVLPFAEDVREFQFPSF------------------SKFPVSWQPNEQQQEAADN 435
D L +A++VRE +FP+ + F + P E + E
Sbjct: 155 -DVLVLQTLLWADEVREAEFPALDETVKVSAKELTMSQQLVASFEADFAPGEFEDEYQAQ 213
Query: 436 LVKMLDLAPSGKGE 449
L K++D A KGE
Sbjct: 214 LRKLID-AKIEKGE 226
>gi|345560253|gb|EGX43378.1| hypothetical protein AOL_s00215g114 [Arthrobotrys oligospora ATCC
24927]
Length = 644
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
E+ ++ V P+Q K Y++G + V S E++ ++ + +++LGF + + + M+
Sbjct: 332 EETAQEVTPDQIRKAYKFGGETVSFSDEEFKKIRNFGDPVLRILGFKPQTELQFWHNMRS 391
Query: 335 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
++ +E + +T +AL + + + I + R+ V+ ++ SE+
Sbjct: 392 STFIYPSEEDYTGSTRTFAALRNKLLKDKLMGIAWFIARRNAAPVMAAIIP---SEE--- 445
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P + LPF +D+R Q P + P PN D +++ L + KG I P
Sbjct: 446 PQGMFIIPLPFVDDIR--QNP---EVPHVVAPNYLIDRMQD-IIRQLHMP---KGYI--P 494
Query: 454 ELTPNPALE 462
E PNPAL+
Sbjct: 495 EKYPNPALQ 503
>gi|46121879|ref|XP_385493.1| hypothetical protein FG05317.1 [Gibberella zeae PH-1]
Length = 1819
Score = 43.5 bits (101), Expect = 0.24, Method: Composition-based stats.
Identities = 93/502 (18%), Positives = 201/502 (40%), Gaps = 67/502 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+LL +DVS SM P + K L+++++I +G++LF
Sbjct: 28 KDAILLAIDVSKSMLEPPPPSDYKKADRDSPVQAALKCAYHLMEQRIISNPKDMMGILLF 87
Query: 51 GTEET---ENELTKEVGGYEH--------VKVLQDIKVVDGHLVQSLKHLPQGTCAGD-- 97
GTE++ E+ ++ GY H V +D+K + + + T + +
Sbjct: 88 GTEKSKFQESGDSRGGLGYPHCYLFTDLDVPAAEDVKALKALVEEGEDEDEVLTPSDEPV 147
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI--ARQMVAF 155
+ ++ + + + G + L ++TD +P K+ + + A+ +
Sbjct: 148 SMSNVLFCANQIFTTKAANF-GSRRLFIVTDN----ANPHASDKQAKSAAAVRAKDLYDL 202
Query: 156 GLRMKNI-VVRASLSGEPH-------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA 207
G+ + + R + + H R + N+ + + KS + S S +
Sbjct: 203 GIMIDLFPITRGDATFDVHKFYDDIIYRDPVGEANMSEVRTSKSGDGLTLLSSLISNVNS 262
Query: 208 RKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 266
++T + +F E++ ++I V Y + P Y + A+ E
Sbjct: 263 KQT---AKRALFSNLPFEIAPGLRISVKGYNIV-HRQVPARTCYIWLDGEKAQIASGETT 318
Query: 267 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
+ ED +KV+ K Y++G + V + E +++K ++++GF S +
Sbjct: 319 -----RIAEDSAKVIEKGDIKKAYKFGGEYVYFTPDEQKSLKDFGSPVIRIIGFKPRSLL 373
Query: 327 -LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-- 383
+ K +F +E ++ +AL + + + +K+ I C+ R Q ++ ++
Sbjct: 374 PIWASTKKSTFIFPSEEDYVGSSRVFTALWQKLLKDDKMGIAWCITRANAQPMLAAIIPS 433
Query: 384 ---TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
+ + S +P + LPF +D+R PS + +++ +V+ L
Sbjct: 434 RERSDDDSGTPYLPAGLWIYPLPFQDDLRNINPPS-----EVLRTSDELTTQMRTIVQQL 488
Query: 441 DLAPSGKGEILQPELTPNPALE 462
L + + P PNPAL+
Sbjct: 489 QLPKA----MYNPSKYPNPALQ 506
>gi|408393271|gb|EKJ72536.1| hypothetical protein FPSE_07173 [Fusarium pseudograminearum CS3096]
Length = 1808
Score = 43.5 bits (101), Expect = 0.26, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMK 333
ED +KV+ K Y++G + V + E +++K ++++GF S++ + K
Sbjct: 322 EDNAKVIEKGDIKKAYKFGGEYVYFTPDEQKSLKDFGSPIIRIIGFKPRSSLPVWASTKK 381
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNVS 388
+F +E ++ +AL + + + +K+ I C+ R Q ++ ++ + + S
Sbjct: 382 STFIFPSEEDYIGSSRVFTALWQKLLKDDKMGIAWCITRANAQPMLAAIIPSRERSDDDS 441
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
+P + LPF +D+R PS + +++ +V+ L L +
Sbjct: 442 GTPYLPAGLWIYPLPFQDDLRNINPPS-----EVLRTSDELTTQMRTIVQQLQLPKA--- 493
Query: 449 EILQPELTPNPALE 462
+ P PNPAL+
Sbjct: 494 -MYNPSKYPNPALQ 506
>gi|239609039|gb|EEQ86026.1| protein Ku70 [Ajellomyces dermatitidis ER-3]
gi|327354321|gb|EGE83178.1| Ku70 [Ajellomyces dermatitidis ATCC 18188]
Length = 655
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E A++ E +++++GF S + MK ++ +E G
Sbjct: 343 KAYKFGGEQISFTQEEQAALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ T + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEIIPQGMWILPL 462
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
PFA+D+R+ + P E D + ++ L K + P+ PNP+L+
Sbjct: 463 PFADDIRQNPETNLITAP---------DELVDKMRTVIQLLQLPKAQ-YDPQKYPNPSLQ 512
>gi|261189322|ref|XP_002621072.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
gi|239591649|gb|EEQ74230.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
Length = 655
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E A++ E +++++GF S + MK ++ +E G
Sbjct: 343 KAYKFGGEQISFTQEEQAALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ T + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEIIPQGMWILPL 462
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
PFA+D+R+ + P E D + ++ L K + P+ PNP+L+
Sbjct: 463 PFADDIRQNPETNLITAP---------DELVDKMRTVIQLLQLPKAQ-YDPQKYPNPSLQ 512
>gi|332028750|gb|EGI68781.1| ATP-dependent DNA helicase 2 subunit 1 [Acromyrmex echinatior]
Length = 509
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-----------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
REA L L+D + M D++ KL +++++KL + +GV+LFGTE
Sbjct: 18 REATLFLVDCTEKMFMHSSDIDDKKITYIEKFFKLYKQILRQKLAWSMQDWMGVVLFGTE 77
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY 113
++++ + +++ LQ+++VV +Q ++ L + L +I V + I
Sbjct: 78 KSDSN-----SPWTNIQTLQELRVVTLDDLQQIRKLSK-------LQSINVAYSLKINMK 125
Query: 114 GETYKGKKHLCLITDAL 130
G K+ L+ DAL
Sbjct: 126 GYESMKLKNNALLLDAL 142
>gi|373956335|ref|ZP_09616295.1| DNA repair protein [Mucilaginibacter paludis DSM 18603]
gi|373892935|gb|EHQ28832.1| DNA repair protein [Mucilaginibacter paludis DSM 18603]
Length = 256
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
E+ K VP ++ +KGY+Y V I A++EA + K +++ F D + YY +
Sbjct: 49 ENTKKEVPYDKIVKGYKYEDDYVIIEDADFEAAAPEKSKVIEIENFVDMDAVNPMYY--E 106
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ +I EP ++ A + L A+K+ +K + R V R + +V
Sbjct: 107 TSYYI-EP-ETKNNKAYALLLEALKKSDKAGLARFVLRSTESLCIV 150
>gi|400596414|gb|EJP64188.1| ku70 protein [Beauveria bassiana ARSEF 2860]
Length = 642
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V S E +++K ++++GF +I +
Sbjct: 321 AEDSTRTVEKGEMKKAYKFGGEYVYFSPEEQKSLKDFGSPIIRIIGFKSRRSIPIWSSVK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEK 390
K ++ +E +T +AL + + +KVA+ C+ R ++ ++ P E
Sbjct: 381 KSSFIYPSEEDYVGSTRVFTALWGKLLKSDKVALAWCIVRTNANPMLAAIMPSKPQSDED 440
Query: 391 IN---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPFA+D+R+ + P Q ++ + +++ L L +
Sbjct: 441 SGTPYLPAGLWLYPLPFADDLRDIKPPGKMA-----QASDDLKTQMRTIIQQLQLPKA-- 493
Query: 448 GEILQPELTPNPALE 462
+ P PNP+L+
Sbjct: 494 --MYNPTKYPNPSLQ 506
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+LL ++VS SM P + K +++++I +G++LF
Sbjct: 28 KDAVLLAIEVSESMLKAPPPSDSKKADRDSPVQAALKCAYHFMEQRIISNPKDMIGILLF 87
Query: 51 GTEETENELTKEVG----GYEHVKVLQDIKVVDGHLVQSLKHL 89
GTE+T +L E G GY H + D+ V V++LK L
Sbjct: 88 GTEKTRFQL-DENGRSGLGYPHCYLFTDLDVPSADDVKALKSL 129
>gi|213972572|ref|NP_001135434.1| ATP-dependent DNA helicase II [Nasonia vitripennis]
Length = 579
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNI-LRHYYMKDVNLFIAE 341
E I GY+YG + +P S + A+K+ K + + GF + L + L + E
Sbjct: 296 ENIINGYKYGGKYIPFSDDDEVAMKYSGSIKGMMVYGFVPQDEVQLECWTGSGSRLIVPE 355
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
N VA +L +AM E AIVR V+ +GVL P V + D + V
Sbjct: 356 TDND--AVAFYSLVQAMVEKRYAAIVRKVYANNNLP-RMGVLFPKV-----VYDDVWGFV 407
Query: 402 ---LPFAEDVREFQFPSFSKFPV---SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 455
LPF D+R Q K P+ N+++ +A D+ + + + E L P +
Sbjct: 408 HIELPFVTDLRIIQ-----KRPIQSLDGTVNKEKLDALDDFIDAMTIV-DNDPEYLNPGM 461
Query: 456 TPN 458
PN
Sbjct: 462 FPN 464
>gi|91082987|ref|XP_974250.1| PREDICTED: similar to ku P80 DNA helicase [Tribolium castaneum]
gi|270007031|gb|EFA03479.1| hypothetical protein TcasGA2_TC013478 [Tribolium castaneum]
Length = 513
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 267 VDYEYKSVE-DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
+D E +S+E D S+V I G + VP+++ ++ +S +L FTDA+N
Sbjct: 266 IDAEDESIEFDASEV------ISGVSRHGKFVPVNNKMFQV---SSSRSFSVLCFTDAAN 316
Query: 326 ILRHYYMKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQ-QSVVVGVL 383
+ H M+ + P S A + L + + NK I R V+ +VV V
Sbjct: 317 VPEHL-MRGGGCYSVLPNASLEKNDAFNCLIDCLAQQNKYVIARRVYNNNYVPKIVVLVP 375
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVR 409
P+ + P F LPFA+DVR
Sbjct: 376 KPDYN-----PKCFVLTALPFADDVR 396
>gi|148228066|ref|NP_001082274.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus laevis]
gi|50604152|gb|AAH77445.1| LOC398357 protein [Xenopus laevis]
Length = 611
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 167/438 (38%), Gaps = 52/438 (11%)
Query: 5 REALLLLLDVSPSMHSVLP------DVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETEN 57
R++L+ L+D S M + D+ C R + I +H++ V+ FGT E+ N
Sbjct: 34 RDSLIFLVDASKPMFESIDGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFFGTRESTN 93
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDM-------LI 110
++H+ VL D+ + L + F D I G D L
Sbjct: 94 -----CDPFKHLCVLHDLDTPGAKRILDLDKYKEEKGRALFCDTIGCGGDFSLGEALWLC 148
Query: 111 KKYGETYKGK---KHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K K K + L T+ P DP + + + M F L + ++
Sbjct: 149 SNLFSNVKVKMSHKRIMLFTNEDNPHANDPAKAKQARAKAEDLKDMGIF-LDLMHLEKPG 207
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R I+ E+++L+ F K+S K + + A+K R +S R +L
Sbjct: 208 GFDISLFYRDIVNTAEDEDLVVQF--KASEKLDDLLKKVRAKEAKK-RALS-----RLNL 259
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
+L + + V VY + K PT++ Y + + VK S ++P
Sbjct: 260 KLGPDVGLTVGVYNLVQKAVKPPTVRLYRE--------SNEPVKTKTRIFHSNTGSLLLP 311
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
+ + + YG + + + E E +K E + L+GF S + +H++ + E
Sbjct: 312 SDTK-RSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFIYPEE 370
Query: 343 G-NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDS 396
+ +T +AL +AI R R+ V L P E + P
Sbjct: 371 SIITGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNMQSAPSG 429
Query: 397 FYFNVLPFAEDVREFQFP 414
F LPFA+D+R+ P
Sbjct: 430 FNLVCLPFADDIRKLDTP 447
>gi|452843591|gb|EME45526.1| hypothetical protein DOTSEDRAFT_170971 [Dothistroma septosporum
NZE10]
Length = 658
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
ED ++ V + + Y++G + + + E ++ + ++++GF S +L + D
Sbjct: 342 EDTARTVEKVEIRRAYKFGGETISFTEEELAKIRNFGDTVLRIIGFKPIS-LLPMWASVD 400
Query: 335 VNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ FI +E G +T SAL + + + +K+ + + R+ +V V+ P V E+ +
Sbjct: 401 KSTFIYPSEDGWVGSTRVFSALHQKLLKDDKMGLAWYIPRKNSVPKLVAVI-PGVEERND 459
Query: 393 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LP+A+D+RE S + P ++ +A +V+ L L +
Sbjct: 460 EGEQKMPPGLWLKPLPWADDIREAPETSLVRAP------DRVTDAMRIIVEQLQLPKA-- 511
Query: 448 GEILQPELTPNPALE 462
+ P PNP+L+
Sbjct: 512 --VYDPYRYPNPSLQ 524
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 20/105 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE---------------KLCSRLIQKKLIYGKNHEVGVIL 49
++A+L +DVS SM + D + K L+Q+++I N +G++L
Sbjct: 34 KDAVLFAIDVSRSMLTAPTDSDPKKPDTALSPTLAALKCAYALMQQRIISNPNDMMGILL 93
Query: 50 FGTE-----ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL 89
FGTE E E+E ++ Y H +L D+ V V+ L++L
Sbjct: 94 FGTERSKFQEGEDEGSRSGLQYPHCYLLTDLDVPAAADVKQLRNL 138
>gi|356576925|ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
max]
Length = 633
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 8/202 (3%)
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
D H +K++ + V+ + V P +R Y+ Q + S + +K + L
Sbjct: 305 DSVTNHPLKIERTFICVDTGALVEEPTKRFLPYK--NQNIIFSMKQLSEIKRVSTGHLHL 362
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF S + +Y +K L+ ++ G + AL R+M ++N+ A+ Q
Sbjct: 363 LGFKPLSCLRDYYNLKPSTFLYPSDEGTDSSMCMFIALHRSMIQLNRFAVAFSGSSSRPQ 422
Query: 377 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVR--EFQFPSFSKFPVSWQPNEQQQEAA 433
V + + I P + LP+++D+R E ++ S V+ ++Q ++AA
Sbjct: 423 LVALIAQEEVIQSGGQIEPPGMHMIYLPYSDDIRFVEERYSDTSGM-VNIASDDQIKKAA 481
Query: 434 DNLVKMLDLAPSGKGEILQPEL 455
NL+K +DL +I P L
Sbjct: 482 -NLIKRIDLKDFSVCQISNPAL 502
>gi|341896246|gb|EGT52181.1| CBN-CKU-80 protein [Caenorhabditis brenneri]
Length = 779
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIK---GYRYGPQVVPIS----SAEWEAVKFKPEKS-- 314
++K+D +Y + K P + IK GY +G V+ + ++ F ++
Sbjct: 278 DIKLDAKYGKTDKTDKNYKPVENIKLMHGYNFGKSVIMMDPEYLKEKYNDHNFNEGQTGG 337
Query: 315 -VKLLGFTDASNI----------------LRHYYMKDVNLFIAEPG----NSRATVAVSA 353
+KL+ FT +N+ + Y+ D + P S AT A A
Sbjct: 338 VLKLIQFTKKANVGLLSDTAQIFSKNNFQILDSYLVDSSAKTVLPSLNAPKSGATKATVA 397
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDVREF 411
+ +AM ++ VA+ R + + V + L P+ E+ + Y LPF++D+R
Sbjct: 398 IIQAMLDLRVVALCRYTF-HAKSHVQLIALIPHKDEETGV---LYMRSVKLPFSDDMRTL 453
Query: 412 QFPSFS---KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEV 463
+FP FS S +P Q A D+L+ + L S +++ ++ +P L++
Sbjct: 454 KFPKFSFDDDEVDSNKPTVAQLSAVDDLIDCMQLPESDISSLVEGGMS-DPKLQM 507
>gi|322712496|gb|EFZ04069.1| ku70 protein [Metarhizium anisopliae ARSEF 23]
Length = 646
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED + V + K Y++G + V + E ++++ ++++GF + +
Sbjct: 322 AEDSIRTVEKGEMKKAYKFGGEYVCFTPDEQKSLRDFGPPVIRIIGFKPRKLLPMWASVK 381
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + NK+ I C+ R Q ++ ++ +
Sbjct: 382 KSTFIFPSEEDFVGSTRVFTALWQKLIKDNKIGIAWCIVRSNAQPILAAIVPSREPSDEK 441
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LPFA+D+RE + P Q +++ + +V+ L L +
Sbjct: 442 SGTPYLPAGLWIYPLPFADDLREIKPPDGVT-----QSSDELKTQMRTIVQQLQLPKA-- 494
Query: 448 GEILQPELTPNPALE 462
+ P PNPAL+
Sbjct: 495 --MYNPLKYPNPALQ 507
>gi|159126402|gb|EDP51518.1| DSB repair complex subunit Ku70, putative [Aspergillus fumigatus
A1163]
Length = 690
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 190/468 (40%), Gaps = 88/468 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
R+A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 28 RDAVLFAIEVSDSMLTPRPSSDPKKRVEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y H + D+ V V+ L+ L + G D +V
Sbjct: 88 GTQASRFYDEDENSRGDLSYPHCYLFTDLDVPSAREVKELRALAEDE--GKARDVLVPSK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + K + L ++TD P D ++ + A+ +
Sbjct: 146 ERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD--SRSQRSAATVRAKDLYDL 203
Query: 156 GLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
G+ ++ +I+ + S + + V +++D SK S+A
Sbjct: 204 GVTIELFPISQPEHEFDSSKFYDDIIYKTSPT-DAEAPVYLKDD------SKVSTASGDG 256
Query: 198 VDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDK 253
+ L + +R + F LEL KI V Y + + P Y +
Sbjct: 257 ISLLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYL-LFKRQAPARSCYVWLGGE 315
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P K T ++ +D ++ V + K Y++G V + E +A++ +
Sbjct: 316 KPQIVKGVTTQI--------ADDTARTVEKSEIRKAYKFGNDQVSFTPEEQKALRHFGDP 367
Query: 314 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
++++GF S + ++H + ++ +E +T SAL + + + +K+A+V
Sbjct: 368 VIRIIGFKPLSALPFWANVKHPFF----IYPSEEDYVGSTRVFSALHQKLLKDHKMALVW 423
Query: 369 CVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVRE 410
+ R+ V+ ++ EK++ P + LP+A+DVR+
Sbjct: 424 FIPRKNAAPVLGAMIAGE--EKVDENGVQKFPPGMWIITLPYADDVRQ 469
>gi|366994446|ref|XP_003676987.1| hypothetical protein NCAS_0F01480 [Naumovozyma castellii CBS 4309]
gi|342302855|emb|CCC70632.1| hypothetical protein NCAS_0F01480 [Naumovozyma castellii CBS 4309]
Length = 625
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R+Y + IA+ G
Sbjct: 313 KAYRYGADYVVLPSTLQSQLVYETFPGLDIRGFMDMELLPRYYLNSESTFIIADTRLGGL 372
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQG---QQSVVVGVLTPNVSEKI------NIPDS 396
+V L + KVA+ R V + Q V+V + + + N +
Sbjct: 373 ADSVTFGVLVDVLLNNRKVAVARYVPKANSEVQMCVLVPLFVAHHDQSFSGEGEENFVRT 432
Query: 397 FYFNVLPFAEDVREFQFPSFS 417
N LPFAED R FP +
Sbjct: 433 LVLNRLPFAEDERVSDFPRLT 453
>gi|307206892|gb|EFN84738.1| Protein Ku70 [Harpegnathos saltator]
Length = 540
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
REA L +D + M P+ + KL +++++KL + +GVILFGT++ +
Sbjct: 27 REATLFAVDATQQMFKEDPETKLSYIHKFFKLYKQILRQKLAWSMQDWMGVILFGTDQKD 86
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG 96
+ +EH++ LQ + VV +Q ++ L + G
Sbjct: 87 AD-----SYWEHIQTLQQLGVVTLDDLQCIRKLSKSNVKG 121
>gi|212530704|ref|XP_002145509.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
gi|210074907|gb|EEA28994.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
Length = 653
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM V P K L+Q+++I +GV+ FG
Sbjct: 29 KDAVLFAIDISDSMLEVRPPESGKGEPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFFG 88
Query: 52 TEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL 89
TE + E+E ++ Y H + D+ V D + V+SL+ L
Sbjct: 89 TEASKFYDEDENSRGGLSYPHCYLFTDLDVPDANDVKSLRAL 130
>gi|294874809|ref|XP_002767109.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239868537|gb|EEQ99826.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 675
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDSFYFNVLPFAEDVR 409
V AL M + KVA VR V R Q + G L+P + E LPFA+D+R
Sbjct: 455 VEALCCRMAKREKVAFVRFVARANAQPIF-GALSPQMPDEASQTSGGLVLLPLPFADDIR 513
Query: 410 EFQFPSFSKFPVSWQPNEQQQ-EAADNLVKMLDLAPSGKGEILQPEL 455
+ P S V Q ++QQ EAA ++++ ++ I P L
Sbjct: 514 SLELPGTSVDEVISQEEQKQQIEAAKSIIRGFRISHWSPYSIDNPSL 560
>gi|119479761|ref|XP_001259909.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
gi|119408063|gb|EAW18012.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
Length = 654
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 212/520 (40%), Gaps = 98/520 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 28 KDAVLFAIEVSDSMLTPRPSSDPKKRVEESPTTAALKCAYHLMQQRIISNPRDMIGVLLY 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y H + D+ V V+ L+ L + G D +V
Sbjct: 88 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAREVKELRALAEDE--GKARDVLVPSK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + K + L ++TD P D ++ + A+ +
Sbjct: 146 ERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD--SKSQRSAATVRAKDLYDL 203
Query: 156 GLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
G+ ++ +I+ + S + + V +++D SK S+A
Sbjct: 204 GVTIELFPISQPEHEFDSSKFYDDIIYKTSPT-DAEAPVYLKDD------SKVSTASGDG 256
Query: 198 VDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDK 253
+ L + +R + F LEL KI V Y + + P Y +
Sbjct: 257 ISLLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYL-LFKRQAPARSCYVWLGGE 315
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P K T ++ +D ++ V + K Y++G V + E +A++ +
Sbjct: 316 KPQIVKGVTTQI--------ADDTARTVEKSEIRKAYKFGNDQVSFTPEEQKALRHFGDP 367
Query: 314 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
++++GF S + ++H + ++ +E +T SAL + + + +K+A+V
Sbjct: 368 VIRIIGFKPLSALPFWANVKHPFF----IYPSEEDYVGSTRVFSALHQKLLKDHKMALVW 423
Query: 369 CVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
+ R+ V+ ++ EK++ P + LP+A+DVR Q P + V+
Sbjct: 424 FIPRKNAAPVLGAMIA--GEEKVDENGVQKFPPGMWIIPLPYADDVR--QNPEMT-LNVA 478
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
+P Q +V+ L L + +P+ PNP+L+
Sbjct: 479 PEPLIDQMR---TIVQQLQLPKAS----YEPQKYPNPSLQ 511
>gi|358394139|gb|EHK43540.1| hypothetical protein TRIATDRAFT_33616 [Trichoderma atroviride IMI
206040]
Length = 648
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 332
ED ++ V ++ K Y++G + V + E ++++ ++++GF + N++ +
Sbjct: 325 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKSIRDYGPPVIRIIGFKN-RNLIPAWASV 383
Query: 333 -KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPN 386
K +F +E ++ SAL + + + K+ I CV R Q V+ V+ +
Sbjct: 384 KKSTFIFPSEEDYIGSSRVFSALWQKLLDSEKIGIAWCVLRSNSQPVLAAVIPSREQSDE 443
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL-------VKM 439
S +P + LP A+D+R+ E+ + +++L V+
Sbjct: 444 ASGTPYLPAGLWICPLPTADDLRDIS-------------AERGLDCSEDLKTKMRVVVQQ 490
Query: 440 LDLAPSGKGEILQPELTPNPALE 462
L+L P G + P PNPAL+
Sbjct: 491 LNL-PKG---VYNPLKYPNPALQ 509
>gi|281200480|gb|EFA74700.1| hypothetical protein PPL_11669 [Polysphondylium pallidum PN500]
Length = 132
Score = 42.7 bits (99), Expect = 0.43, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
++ PG+ A A+S+L M E + + R V R G S + +L P++ + Y
Sbjct: 2 VSPPGDKVARSALSSLIHGMAETKQALLSRYVKRNG-SSASIALLYPHIKANY---ECLY 57
Query: 399 FNVLPFAEDVREFQFPSFSKF-PVSWQPNEQQQEAAD 434
LPF +D++++QFP + P + +P E D
Sbjct: 58 VCQLPFLDDLKQYQFPPIAPTNPATRKPFIPTAEQVD 94
>gi|50289869|ref|XP_447366.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526676|emb|CAG60303.1| unnamed protein product [Candida glabrata]
Length = 606
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGN--SRATVAVSALARAMKEMNKVAIVRCVW 371
S+ ++GF + N L Y D LFI N + A ++L R +K++ KV +V W
Sbjct: 371 SLTVIGFLNEDNSLVFYNNIDKTLFITPDENVIEGSFTAFASLFRTLKKLKKVGVV---W 427
Query: 372 --RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS--WQPNE 427
+ S + +L P+ + N FY +PF +++R ++P+ S ++ W+ +
Sbjct: 428 GSTKSNSSPSLYLLWPSKDDDNN--QGFYLTKVPFIDEIR--KYPTLSNININEEWEEYK 483
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
+E ++ +L E + NPAL
Sbjct: 484 NVKELTQGIISHFNLKSGYHAEEFR-----NPAL 512
>gi|325091560|gb|EGC44870.1| Ku70 protein [Ajellomyces capsulatus H88]
Length = 655
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 403 PFAEDVRE 410
PFA+D+R+
Sbjct: 463 PFADDIRQ 470
>gi|225562114|gb|EEH10394.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 655
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 403 PFAEDVRE 410
PFA+D+R+
Sbjct: 463 PFADDIRQ 470
>gi|406861114|gb|EKD14170.1| putative ATP-dependent DNA helicase II subunit 1 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 657
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKD 334
D S+ + + K YR+G V ++ E +KF ++++GF S + + K
Sbjct: 327 DTSRRIESSEIKKAYRFGGTQVLFTAEEQLKIKFFESPVLRIIGFKPQSMLPIWASVQKA 386
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-- 392
++ +E G + +T +AL + + + + + + R+ + ++V +L +E+I+
Sbjct: 387 TFIYPSEDGYTGSTRTFAALWQKLLKDKIMGLAWFIARKNAKPLIVAILPS--AERIDET 444
Query: 393 -----IPDSFYFNVLPFAEDVRE 410
+P + LPFA+D+RE
Sbjct: 445 TGAQVVPQGLWLYPLPFADDIRE 467
>gi|337743283|gb|AEI73138.1| XRCC 6 [Kryptolebias marmoratus]
Length = 306
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
P + K YG + + + E +A+K + + L+GF + H++++ E
Sbjct: 142 PSEIKKAQVYGKKQIVMERDEVDAIKKFDDPRLFLIGFKPMEKLKLHHHIRPSVFIYPEE 201
Query: 343 GNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-PDS 396
+ + + + SAL + E N A+ RC+ R+ V L P + + K+ I P
Sbjct: 202 EDVKGSACLFSALLKKCSERNIFALCRCISRRNYPPRFVA-LVPQLEDVDEGKVQITPPG 260
Query: 397 FYFNVLPFAEDVREFQFP 414
F LP+A+D+R P
Sbjct: 261 FNVIYLPYADDLRTLDPP 278
>gi|257791350|ref|YP_003181956.1| Ku protein [Eggerthella lenta DSM 2243]
gi|257475247|gb|ACV55567.1| Ku protein [Eggerthella lenta DSM 2243]
Length = 274
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKF 309
D A ++ A +K K+ D + + PE +KGY+Y G VV + E + +K
Sbjct: 25 DDAVRFNQLAKDSMKRVRYVKTCPDCKRELKPEDIVKGYQYEKGKYVV-VDDEELDVIKT 83
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
++++K++ F+D + Y+ K + +A+PG + A+ L RAM + K+AI
Sbjct: 84 DADRAMKIVQFSDIDEVPPLYFEKPYQV-VAQPGGEK---ALELLRRAMVDEGKIAI 136
>gi|146162847|ref|XP_001470738.1| ku P70 DNA helicase [Tetrahymena thermophila]
gi|146146270|gb|EDK31925.1| ku P70 DNA helicase [Tetrahymena thermophila SB210]
Length = 711
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 293 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR---ATV 349
G + V +S + +K E ++L+GF S L+ Y+ + F+ P + ++
Sbjct: 324 GGEKVKVSKGDINEIKSFEEPGMRLIGFK-PSGTLKAYHNYRTSYFVY-PDDYHVKGSSQ 381
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---EKINIPDSFYFNVLPFAE 406
+ AL M +K+AIVR + R+G Q +L S + + P F+ LP+A+
Sbjct: 382 SFHALISQMIAKDKIAIVRFIPRKGTQVRFCALLPQEESYDEDHVQTPPGFHLIFLPYAD 441
Query: 407 DVR 409
D R
Sbjct: 442 DQR 444
>gi|148265477|ref|YP_001232183.1| Ku domain-containing protein [Geobacter uraniireducens Rf4]
gi|269933390|sp|A5G742.1|Y3454_GEOUR RecName: Full=Probable DNA repair protein Gura_3454
gi|146398977|gb|ABQ27610.1| Ku domain protein [Geobacter uraniireducens Rf4]
Length = 261
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 279 KVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
K+VPP++ I+GY GP + +PI+ E E+V + ++++++ F D + + YY L
Sbjct: 55 KMVPPDEIIRGYEIGPDRYLPITDEELESVSPERSRTIEIVEFIDMNEVDPIYYDHPYYL 114
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV----GVLT 384
+ G A L M+ NK + + V + + V V G LT
Sbjct: 115 VPLKGGEK----AYRLLVEVMRRTNKAGLAKFVLAEREYLVAVKSTEGALT 161
>gi|154283967|ref|XP_001542779.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410959|gb|EDN06347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 599
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT--PNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 403 PFAEDVRE 410
PFA+D+R+
Sbjct: 463 PFADDIRQ 470
>gi|442570192|sp|Q1DU75.2|KU70_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|392865133|gb|EAS30893.2| ATP-dependent DNA helicase II subunit 1 [Coccidioides immitis RS]
Length = 647
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E A++ + ++++GF S++ K ++ +E G
Sbjct: 340 KAYKFGGEHVAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKHSTFIYPSEAGFVG 399
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 461 LE 462
L+
Sbjct: 508 LQ 509
>gi|67901532|ref|XP_681022.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
gi|74593383|sp|Q5AVC7.1|KU70_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|40742351|gb|EAA61541.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
Length = 629
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 190/476 (39%), Gaps = 69/476 (14%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K L+Q+++I +GV+L+GT+++ E+E ++ Y + + D+ + H
Sbjct: 41 KCAYHLMQQRIISNPRDMIGVLLYGTKQSKFYDEDENSRGDLTYPNCYLFTDLNIPSAHE 100
Query: 83 VQSLKHLPQGT-CAGDFLDAIVVGVDM--LIKKYGETYKGK------KHLCLITDALCPL 133
V L+ L Q A L+ V M L+ + + K + L ++TD P
Sbjct: 101 VLELRSLVQDEENAKKILEPSNEPVSMANLLFCVNQIFTLKAPNFLSRRLFIVTDNDNPH 160
Query: 134 KDPDVGTKEDQVSTIARQMVAFGLRMK------------------NIVVRASLSGEPHMR 175
D + + A+ + G+ ++ +I+ +AS +P
Sbjct: 161 GD--NKSFRSAATVRAKDLYDLGVTIELFPISQIEHEFDTSKFYDDIIYKAS-PNDPDAP 217
Query: 176 VIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV-- 233
++ D +N S + S S R+ + LEL KI V
Sbjct: 218 AYLKPDAKMNDAQDGISLLNGLLSSINSRSVPRRAQ------FSNMSLELGPNFKISVSG 271
Query: 234 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 293
++ K E + P K T ++ +D ++ + + K Y++G
Sbjct: 272 YILFKRQESARSCYVWLGGEKPQIAKGVTTQI--------ADDSARTIEKWEIKKAYKFG 323
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVS 352
V + E +++K E ++++GF S + +K + ++ E +T S
Sbjct: 324 GDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDYVGSTRVFS 383
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAE 406
AL + + KVA+V + R+ V+ ++ EK++ IP + LPFA+
Sbjct: 384 ALYQKLLRDQKVALVWYIARKAASPVLGAMMA--GEEKVDENGIQKIPPGMWIIPLPFAD 441
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
DVR Q P + V+ +P Q +++ L L P G + P+ PNP+L+
Sbjct: 442 DVR--QNPE-TALQVAPEPLIDQMR---TVIQQLQL-PKG---VYDPQKYPNPSLQ 487
>gi|326430343|gb|EGD75913.1| hypothetical protein PTSG_00622 [Salpingoeca sp. ATCC 50818]
Length = 575
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 176/443 (39%), Gaps = 53/443 (11%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG 92
++ K++ VG++ F TE + + EHV +LQD+ V +Q L+ + G
Sbjct: 30 LRNKIVCSDKDLVGIVFFSTEHRKGD-----SDPEHVYILQDLDVPSAEQIQLLESIADG 84
Query: 93 TCAGDFLDAI----VVGVDMLIKKYGETYKG------KKHLCLITDALCPLKDPDVGTKE 142
DF + I ++ + G + K + L T+ P D +
Sbjct: 85 EY--DFSEHIGSSDRYSLNDALWACGNLFSNVRTKVETKRILLFTNVDNPHSTDDDLRR- 141
Query: 143 DQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
Q+ T AR + G+ + +++ +S + + +M ++N + + + +S
Sbjct: 142 -QLETKARDLTDLGIEI-DLMHMSSDAAKFNMDAFYRP-LVVNADDEPEAQVSQGFESLL 198
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--DKF 260
+ + + + +TI ++S+ I + VY G + KA T D
Sbjct: 199 ARVRCKAQKKRARMTI---PWQISDDFFISIKVYNLVGS---------ATKASYTWLDGR 246
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
EV + E S ++ + + + YG + + E + ++ + LLGF
Sbjct: 247 DNEEVTSKTRFFCSETSSPLLSTDMKY-SFTYGGEKIVFDKTEVDQMRTFGSPGLLLLGF 305
Query: 321 TDASNILRHYYMKDVNLFIAEP----GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
S + + Y +K + + G++R A L R ++ +++V I R + R
Sbjct: 306 KPRSALHKEYNVKKSSFIYPDESLVGGSTRVFAAF--LDRCLR-LDRVPICRLIPRANSP 362
Query: 377 SVVVGVL--TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
V +L V E N +P F+ LPFAED+R + K P +P E+Q A
Sbjct: 363 PEFVALLPQEERVDEDGNQVVPPGFHIITLPFAEDMRSLK---KKKGP---EPTEEQVGA 416
Query: 433 ADNLVKMLDLAPSGKGEILQPEL 455
L+K ++ + P L
Sbjct: 417 MKKLIKSMNFTGFSSEKFENPSL 439
>gi|303319009|ref|XP_003069504.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109190|gb|EER27359.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320041120|gb|EFW23053.1| hypothetical protein CPSG_00952 [Coccidioides posadasii str.
Silveira]
Length = 647
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSR 346
K Y++G + + + E A++ + ++++GF S++ + + ++ +E G
Sbjct: 340 KAYKFGGEHIAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKQSTFIYPSEAGFVG 399
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 461 LE 462
L+
Sbjct: 508 LQ 509
>gi|293400606|ref|ZP_06644751.1| Ku protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373452080|ref|ZP_09543998.1| Ku protein [Eubacterium sp. 3_1_31]
gi|291305632|gb|EFE46876.1| Ku protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371967512|gb|EHO84983.1| Ku protein [Eubacterium sp. 3_1_31]
Length = 264
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGF 320
THE +V Y+ K + K + E +KGY+Y + V +++ E E +K + ++++++ F
Sbjct: 38 THE-RVKYK-KYCPNCDKELKSEDIVKGYQYEKDKYVIMTNDEIEKLKVEKDRTIQIQHF 95
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
T +NI YY K+ + A P A A L +AM+E N VA+ + V G + ++
Sbjct: 96 TSLANINDLYYEKN---YYAVP-EKHAEKAYELLRKAMQEENVVAVAKTVI--GTKETLL 149
Query: 381 GVLTPNVSEKINIPDSFY 398
L P+ E+I + FY
Sbjct: 150 A-LCPS-DEEIIVKTLFY 165
>gi|116196230|ref|XP_001223927.1| hypothetical protein CHGG_04713 [Chaetomium globosum CBS 148.51]
gi|121783138|sp|Q2H0I3.1|KU70_CHAGB RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|88180626|gb|EAQ88094.1| hypothetical protein CHGG_04713 [Chaetomium globosum CBS 148.51]
Length = 622
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKL-------------CS-RLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM P +K C+ + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSSSMLQQPPATDKKRADKDSAIAAALKCAYQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEET--ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL 89
GTE++ +E+ GY H + D+ V V+SLK L
Sbjct: 89 GTEKSRFRDEVGGRSSGYPHCYLFTDLDVPAAEDVKSLKAL 129
>gi|295657472|ref|XP_002789304.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283934|gb|EEH39500.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 573
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ + +++++GF S++ MK ++ +E G
Sbjct: 342 KAYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ K+N IP +
Sbjct: 402 STRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKT--KLNEDGEQMIPQGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R++ + P E D + ++ L K + P+ PNP+
Sbjct: 460 PLPFADDIRQYPETNLIIAP---------DELVDKMRTVVQLLQLPKAQ-YDPQKYPNPS 509
Query: 461 LE 462
L+
Sbjct: 510 LQ 511
>gi|259484104|tpe|CBF80039.1| TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Source:UniProtKB/Swiss-Prot;Acc:Q5AVC7] [Aspergillus
nidulans FGSC A4]
Length = 612
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 190/476 (39%), Gaps = 69/476 (14%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K L+Q+++I +GV+L+GT+++ E+E ++ Y + + D+ + H
Sbjct: 24 KCAYHLMQQRIISNPRDMIGVLLYGTKQSKFYDEDENSRGDLTYPNCYLFTDLNIPSAHE 83
Query: 83 VQSLKHLPQGT-CAGDFLDAIVVGVDM--LIKKYGETYKGK------KHLCLITDALCPL 133
V L+ L Q A L+ V M L+ + + K + L ++TD P
Sbjct: 84 VLELRSLVQDEENAKKILEPSNEPVSMANLLFCVNQIFTLKAPNFLSRRLFIVTDNDNPH 143
Query: 134 KDPDVGTKEDQVSTIARQMVAFGLRMK------------------NIVVRASLSGEPHMR 175
D + + A+ + G+ ++ +I+ +AS +P
Sbjct: 144 GD--NKSFRSAATVRAKDLYDLGVTIELFPISQIEHEFDTSKFYDDIIYKAS-PNDPDAP 200
Query: 176 VIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV-- 233
++ D +N S + S S R+ + LEL KI V
Sbjct: 201 AYLKPDAKMNDAQDGISLLNGLLSSINSRSVPRRAQ------FSNMSLELGPNFKISVSG 254
Query: 234 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 293
++ K E + P K T ++ +D ++ + + K Y++G
Sbjct: 255 YILFKRQESARSCYVWLGGEKPQIAKGVTTQI--------ADDSARTIEKWEIKKAYKFG 306
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVS 352
V + E +++K E ++++GF S + +K + ++ E +T S
Sbjct: 307 GDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDYVGSTRVFS 366
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAE 406
AL + + KVA+V + R+ V+ ++ EK++ IP + LPFA+
Sbjct: 367 ALYQKLLRDQKVALVWYIARKAASPVLGAMMA--GEEKVDENGIQKIPPGMWIIPLPFAD 424
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
DVR Q P + V+ +P Q +++ L L P G + P+ PNP+L+
Sbjct: 425 DVR--QNPE-TALQVAPEPLIDQMR---TVIQQLQL-PKG---VYDPQKYPNPSLQ 470
>gi|290970691|ref|XP_002668219.1| predicted protein [Naegleria gruberi]
gi|284081492|gb|EFC35475.1| predicted protein [Naegleria gruberi]
Length = 225
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 315 VKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
+KL+GF S + + H Y L+ + + + + +SAL + M EMN++AI R + R+
Sbjct: 119 IKLIGFKPKSRLKIYHNYKSSGFLYPNDSKINGSLLTLSALHKKMIEMNRIAICRFIQRE 178
Query: 374 GQQSVVVGVLTPN--VSEKIN---IPDSFYFNVLPFAED 407
G + +L + E+ N P F LP+A++
Sbjct: 179 GTMPQFIALLPQEELIDEESNTQITPPGFQIIYLPYADE 217
>gi|119182187|ref|XP_001242242.1| hypothetical protein CIMG_06138 [Coccidioides immitis RS]
Length = 613
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E A++ + ++++GF S++ K ++ +E G
Sbjct: 340 KAYKFGGEHVAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKHSTFIYPSEAGFVG 399
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 461 LE 462
L+
Sbjct: 508 LQ 509
>gi|340517647|gb|EGR47890.1| hypothetical protein TRIREDRAFT_63200 [Trichoderma reesei QM6a]
Length = 649
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V ++ K Y++G + V + E + ++ +++++GF S I +
Sbjct: 327 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKKLRDFGAPTIRIIGFKKRSMIPVWASVK 386
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
K +F +E +T SAL + + + +K+ + CV R Q + ++ + +
Sbjct: 387 KSTFIFPSEEDYIGSTRVFSALWQKLLKDDKIGLAWCVLRSNAQPMFAALIPSREQSEDD 446
Query: 393 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LP A+D+R+ K S E + +V+ L+L P G
Sbjct: 447 AGTPYLPAGLWLYPLPTADDLRDINVE--RKLDCS----EDLKTKMRVIVQQLNL-PKG- 498
Query: 448 GEILQPELTPNPALE 462
I P PNPAL+
Sbjct: 499 --IYNPLKYPNPALQ 511
>gi|284043275|ref|YP_003393615.1| Ku protein [Conexibacter woesei DSM 14684]
gi|283947496|gb|ADB50240.1| Ku protein [Conexibacter woesei DSM 14684]
Length = 300
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP EQ +KGY P + V ++ E +A+ + K++ + F D ++I YY D I
Sbjct: 56 VPFEQIVKGYEVAPDRYVIVTQDELDALDPRATKTIDIEEFVDLADIDPVYY--DSAYHI 113
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
A P A A L AM+E KVAI R V R QQ
Sbjct: 114 A-PATGGAK-AYRLLLSAMEEAGKVAIGRFVLRTRQQ 148
>gi|188584779|ref|YP_001916324.1| Ku protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349466|gb|ACB83736.1| Ku protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 259
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 270 EYKSV-EDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
EYK V + K VP E+ +KGY Y P + V + ++EA+ + +S+ ++ F + S I
Sbjct: 43 EYKRVCSNCKKEVPYEEIVKGYEYEPGKFVVLEDEDFEALPQEEARSINIVEFVNLSEID 102
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
YY K L E G L + +KE KVA+ + V R
Sbjct: 103 PVYYDKTYYLTPQETGEK----PYQLLKQVLKEKGKVAVCKVVIR 143
>gi|322795604|gb|EFZ18283.1| hypothetical protein SINV_00939 [Solenopsis invicta]
Length = 536
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEK---LCSRLIQKKLIYGKNHEVGVILFGTEETE 56
REA L L+D + M + L ++K L +++++KL + +GV+LFGTEE++
Sbjct: 25 REATLFLVDTTQKMFEIELESKLSHIQKFFKLYKQILRQKLAWSMKDWMGVVLFGTEESD 84
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT 93
L ++++++L ++++V +Q ++ L +
Sbjct: 85 VNL-----AWKNIQILHELRIVTLDDLQKIRKLTKNN 116
>gi|255949402|ref|XP_002565468.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592485|emb|CAP98839.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 658
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E +A++ + ++++GF S + +K + ++ +E
Sbjct: 344 KAYKFGGEQVSFTIEEQQALRSFGDPVIRIIGFKPLSALPFWANVKHPSFIYPSEEDYVG 403
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + E K+A+V + R+ V+ ++ +EKI+ IP +
Sbjct: 404 STRVFSALHQKLLESEKLALVWFIPRRNASPVLAAMIA--GAEKIDENGVQKIPPGMWII 461
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+DVR Q P + + + +A ++V+ L L + + P PNP+
Sbjct: 462 PLPFADDVR--QNPESTVH----RAGDALNDAMRDVVRQLQLPKA----VYDPSKYPNPS 511
Query: 461 LE 462
L+
Sbjct: 512 LQ 513
>gi|425774068|gb|EKV12387.1| Ku seventy [Penicillium digitatum Pd1]
gi|425776194|gb|EKV14423.1| Ku seventy [Penicillium digitatum PHI26]
Length = 653
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +A++ + ++++GF S + +K + ++ +E
Sbjct: 344 KAYKFGGEQISFTIEEQQALRSFGDPVIRIIGFKSLSALPIWANVKHPSFIYPSEENYIG 403
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V + R+ V+ ++ +EKI+ IP +
Sbjct: 404 STRVFSALQQKLLDSEKLALVWFIPRKNASPVLAAMIA--GAEKIDENGVQKIPPGMWII 461
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+DVR+ + ++ + +A ++V+ L L + + +P PNP+
Sbjct: 462 PLPFADDVRQNPESTVNR------AGDALNDAMRDVVRQLQLPKA----VYEPSKYPNPS 511
Query: 461 LE 462
L+
Sbjct: 512 LQ 513
>gi|452822798|gb|EME29814.1| ATP-dependent DNA helicase 2 subunit 1 isoform 1 [Galdieria
sulphuraria]
Length = 593
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 315 VKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
++L+GF + + + Y M+ L+ ++ + + ++ L + M + N++AIVR +R+
Sbjct: 312 MELIGFENKNKLKWQYNMRPSYFLYPSDHTIKGSQLLMAVLWKQMLQENQIAIVRVCFRR 371
Query: 374 GQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREF---QFPSFSKFPVSWQP 425
+ L P +K P F+ LPFAE++R+ Q+P ++ P
Sbjct: 372 TSHPRLAA-LVPQDEKKTESHLQTEPCGFHLIWLPFAEEIRKEWKKQYPKWNNL-----P 425
Query: 426 NEQQQEAADNLVKMLDL 442
++Q EAA N++ L +
Sbjct: 426 SQQCVEAAMNVISKLSM 442
>gi|282891301|ref|ZP_06299803.1| hypothetical protein pah_c050o078 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175062|ref|YP_004651872.1| DNA repair protein [Parachlamydia acanthamoebae UV-7]
gi|281498798|gb|EFB41115.1| hypothetical protein pah_c050o078 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479420|emb|CCB86018.1| putative DNA repair protein Fjoh_3304 [Parachlamydia acanthamoebae
UV-7]
Length = 270
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 279 KVVPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K VP + +KGY Y G VV + ++E K K+++++ F D + + YY K
Sbjct: 53 KEVPWNEIVKGYEYEKGDYVV-LDDKDFEKANLKKTKTIEIVNFVDENEVDTIYYSKP-- 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
+ EP + A A S L A+K+ KV + + + R + V+ V
Sbjct: 110 -YFLEP-DKNAFSAYSLLREALKKSKKVGLAKYILRNREHLAVIKV 153
>gi|241958364|ref|XP_002421901.1| high affinity DNA-binding factor subunit, putative; protein Ku DNA
binding protein subunit, putative [Candida dubliniensis
CD36]
gi|223645246|emb|CAX39888.1| high affinity DNA-binding factor subunit, putative [Candida
dubliniensis CD36]
Length = 610
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 11/188 (5%)
Query: 280 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK-SVKLLGFTDASNILRHYYMKDVNLF 338
+VP + G++Y + + + E V P S+ +LGF +N Y+ +D
Sbjct: 290 IVPRAECTPGFKYSHRDILALTLELTEVATLPTYPSINVLGFMKTNNFCYAYFTQDAMYV 349
Query: 339 IAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
I +S R + +++ AM E+N +A+VR V + + V V+ I +
Sbjct: 350 IPHQKDSERNRLTFNSMVTAMIELNYIALVRFVQKPDGEVQVCAAFPKKVALGNQIGEVL 409
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTP 457
+ ED + +FP N + D L++ + + E ++
Sbjct: 410 LLVRIAMKEDEKIGRFPDL---------NNTDDNSVDELMESFISSKKLRDEHFDADIID 460
Query: 458 NPALEVLN 465
N + +LN
Sbjct: 461 NHMIGLLN 468
>gi|402218254|gb|EJT98331.1| ku70-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 678
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 210/554 (37%), Gaps = 120/554 (21%)
Query: 4 TREALLLLLDVSPSMHSVLPDV-------EKLCSR--------------LIQKKLIYGKN 42
+++A++L + S SMH+V ++ EK R L ++K++ G N
Sbjct: 29 SKDAIILAIQCSESMHTVREELLKSEDEDEKGKGRGRTSFEIALRSTVELQKRKVVVGPN 88
Query: 43 HEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQ------------------ 84
VG++ + T + +++ G Y H+ V +++ ++ +Q
Sbjct: 89 DSVGIVFWDTVRS-FAFSQKQGDYRHMYVYKEVGLITAESIQEQMHLLARAQEKNPTYLR 147
Query: 85 -----SLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG 139
S +H+P D + ML + G G + L+TD DP G
Sbjct: 148 KRFQPSTEHMP-------ISDMLTACNAML--RTGAPKSGTHRIFLLTDE----DDPTAG 194
Query: 140 TKEDQVSTI---ARQMVAFGLRMKNIVVRASLSGEPHM----RVIIENDNLLNIFSKKSS 192
D+ + AR ++ +S H + E + S+
Sbjct: 195 LPADRRIKLLQSARTRAGDTYEKGWNIIPFFISTPEHTFDPSKFWREALSREGEEGGSST 254
Query: 193 AKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY-----KKTGEEKF--- 244
+ V L + R+I T+F L L+E + I + Y + G+ K+
Sbjct: 255 GEGDLVSGFEELLREMQVREIPRRTLFHVPLILAEGITIDIKGYGLVTVQSKGQYKYLAD 314
Query: 245 --PTLKKYSDKAPSTDKFATHEV-KVDYEY----------KSVEDPSKVVPPEQR---IK 288
LK+ + K DK EV K D Y + ++P +V E++ ++
Sbjct: 315 RDGMLKEATVKTTYIDKDDQGEVPKTDIRYALPFGKTWGDEQQDEPMEVDETEEKKPKMR 374
Query: 289 GYRYGPQVVP-ISSAEWEAVKFKPEK-----------SVKLLGFTDASNILRHYYMK-DV 335
G R VV + + V F PE+ S+KLLGF D + +K V
Sbjct: 375 GRRGNILVVEGVPAVTRHEVLFTPERMKELRSMVLEPSIKLLGFKDRGELTFFDNVKHSV 434
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 392
++ +E + +T +AL +++ + +K+ I V R+G V +L P E +
Sbjct: 435 FIYPSEDDYTGSTRTFAALLQSLIKKDKIGIALSVTRRGYTPQFVALL-PRQEELDSDTG 493
Query: 393 ---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE 449
+P + PFA+D+RE S + Q E +++AA + L +
Sbjct: 494 AQLLPPGLHMIPFPFADDIRE------SAYDQLMQCTEHEKDAALAWINKLTIRAG---- 543
Query: 450 ILQPELTPNPALEV 463
+ PNP L +
Sbjct: 544 -YDADNYPNPTLRL 556
>gi|198423929|ref|XP_002123200.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 233
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 352 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVL------TPNVSEKINIPDSFYFNVLPFA 405
+AL + + + VAI R V R + +L P SE+I P F+ LPFA
Sbjct: 6 TALLQKCLDKDYVAICRFVPRTSASMRNIALLPQREEIDPETSEQIK-PSGFFIVYLPFA 64
Query: 406 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEV 463
+DVRE + P P+E+Q ++A+++++ L P NPAL+
Sbjct: 65 DDVRETELPE-----EQPSPSEEQVQSAESIIRKLRFK-------YDPNSFDNPALQT 110
>gi|83590332|ref|YP_430341.1| DNA end-binding protein Ku [Moorella thermoacetica ATCC 39073]
gi|83573246|gb|ABC19798.1| DNA end-binding protein Ku [Moorella thermoacetica ATCC 39073]
Length = 277
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 281 VPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 338
VPPE+ +GY Y G V+ + + EA+ + +S+ ++ F D I Y+ + L
Sbjct: 55 VPPEEIARGYEYEKGKYVI-LREEDLEAIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLA 113
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
A+ G + L +AM+E KVA+ R R + V V P
Sbjct: 114 PADMGQKPYLL----LKKAMEETGKVAVARVTIRSRESLATVRVYGP 156
>gi|37931498|gb|AAP13464.1| Ku80p [Kluyveromyces lactis]
Length = 521
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
K YRYG V + E K + + + GF D + RHY + + + N
Sbjct: 311 KAYRYGADYVDLPMPLDEERKLSEKPGLDIRGFMDIDKLPRHYLCSESMYLVPDSKNGSK 370
Query: 348 T--VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI-NIPDSFYFNVLPF 404
+ L ++ +M ++ I R V + G + + + V +K N N LP
Sbjct: 371 GDFLGFVTLVDSLIKMKRLIIARFVPKFGNEVQMCSLFPVRVHDKDRNEVRLLVLNRLPM 430
Query: 405 AEDVREFQFP 414
+ED R FP
Sbjct: 431 SEDERNSAFP 440
>gi|285028687|gb|ADC34633.1| DSB repair complex subunit Ku70 [Penicillium decumbens]
Length = 620
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
+D ++ V + K Y++G + V + E + ++ E ++++GF S + +K
Sbjct: 288 ADDTAQTVEKAEIRKAYKFGGEQVTFTPEELQGLRNFGEPVIRIIGFKPLSTLPIWANVK 347
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ ++ E +T SAL + + + K+A+V + R+ VV ++ EK++
Sbjct: 348 HPSFIYPCEDDFVGSTRVFSALHQKLLKDGKMALVWFIPRKNSAPVVAAMIA--GEEKLD 405
Query: 393 ------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+P + LPFA+DVR+ S P + +A ++ L L P G
Sbjct: 406 ENNVQKVPPGMWLIPLPFADDVRQNPPSVLSVSP------DHLTDAMRQVIGQLQL-PKG 458
Query: 447 KGEILQPELTPNPALE 462
P+ PNPAL+
Sbjct: 459 ---TYDPQKYPNPALQ 471
>gi|167039605|ref|YP_001662590.1| Ku domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915145|ref|ZP_07132460.1| Ku protein [Thermoanaerobacter sp. X561]
gi|307725069|ref|YP_003904820.1| Ku protein [Thermoanaerobacter sp. X513]
gi|166853845|gb|ABY92254.1| Ku domain protein [Thermoanaerobacter sp. X514]
gi|300888869|gb|EFK84016.1| Ku protein [Thermoanaerobacter sp. X561]
gi|307582130|gb|ADN55529.1| Ku protein [Thermoanaerobacter sp. X513]
Length = 270
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYEEKYLVMETMHFPDEI 170
>gi|160879871|ref|YP_001558839.1| Ku protein [Clostridium phytofermentans ISDg]
gi|269969713|sp|A9KS68.1|Y1728_CLOPH RecName: Full=Probable DNA repair protein Cphy_1728
gi|160428537|gb|ABX42100.1| Ku protein [Clostridium phytofermentans ISDg]
Length = 257
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 279 KVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
K V E +KGY Y + V I+ E E +K + EKS+++L F + I YY K
Sbjct: 52 KEVKTEDIVKGYEYDDDKYVVITDEEIEKIKTEKEKSIQILHFAQLNQISPVYYEKTYQA 111
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
+ E G + A L A+ K+AI + V G + ++ ++ P D
Sbjct: 112 -VPETGGEK---AFELLRSALMAEQKIAIGKTVM--GTKDTLMAII-PR-------EDGI 157
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
+ + +A+D++ Q ++K V NEQ+ A L+ +D
Sbjct: 158 LISTMFYADDIKAIQ-KQYTKPEV----NEQEFNMAKLLINSMD 196
>gi|326390406|ref|ZP_08211964.1| Ku protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018424|ref|YP_004820777.1| DNA repair protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993524|gb|EGD51958.1| Ku protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033767|gb|AEM79493.1| DNA repair protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 270
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVMETMHFPDEI 170
>gi|156061149|ref|XP_001596497.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980]
gi|154700121|gb|EDN99859.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 645
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
ED ++V+ + K Y++G V + E + +K ++++GF S +L ++
Sbjct: 321 AEDSARVIQKTEIKKAYKFGGAQVLFTPDEQKELKNFGPSGLRIIGFKPQS-MLPYWASV 379
Query: 334 DVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL------TP 385
+ FI +E G +T SAL + + NK+ + + R+ +V +L P
Sbjct: 380 HKSTFIYPSENGYVGSTRVFSALWEKLLKDNKMGLGWYIARKDANPAIVAILPSVEKFDP 439
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFP 414
+++I P + LPFA+D+R P
Sbjct: 440 ATNQQI-FPAGLWLYPLPFADDLRSVSAP 467
>gi|167036900|ref|YP_001664478.1| Ku domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115319|ref|YP_004185478.1| Ku protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855734|gb|ABY94142.1| Ku domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928410|gb|ADV79095.1| Ku protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 270
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYEEKYMVMETMHFPDEI 170
>gi|310795234|gb|EFQ30695.1| ATP-dependent DNA helicase II [Glomerella graminicola M1.001]
Length = 652
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+LL +DVS SM S + K L+Q+++I +G++ F
Sbjct: 30 KDAILLAIDVSASMLQRPQTSGSKKADKDSAVEAALKCAYHLMQQRIISNPRDMMGILFF 89
Query: 51 GTEET--ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL 89
GTE++ + E + GY H + D+ + V++LK L
Sbjct: 90 GTEKSKFQEESARSGLGYPHCYLFTDLDIPAAEDVKALKTL 130
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 332
ED ++ V + K Y++G + V + E +++K ++++GF S IL +
Sbjct: 326 AEDSARTVEKTEFKKAYKFGGEFVHFAPEEQKSLKAFGSPIIRIIGFKPRS-ILPFWASV 384
Query: 333 -KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPN 386
K +F +E +T SAL + + K+ I + R ++ V+ + +
Sbjct: 385 KKSTFIFPSEEDYVGSTRVFSALWQKLLNDKKIGIAWAITRSNASPILAAVIPSHEKSED 444
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLA 443
S +P + LPFA+D+RE P S +S E D + V+ L L
Sbjct: 445 DSGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVIS------SNELTDRMRVIVQQLQLP 497
Query: 444 PSGKGEILQPELTPNPALE 462
+ + P+ PNP+L+
Sbjct: 498 KA----MFNPKKYPNPSLQ 512
>gi|429862115|gb|ELA36774.1| ku70 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 649
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V ++ E +++K ++++GF S +
Sbjct: 324 AEDSARTVEKPEFKKAYKFGGEYVHFTTEEQKSLKDFGTPIIRIIGFKPRSMLPFWASVK 383
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + K+ + + R ++V ++ + +
Sbjct: 384 KSTFIFPSEEDYVGSTRVFTALWQKLLKYKKIGVAWAITRSNANPILVAIIPSHEQSEDD 443
Query: 388 SEKINIPDSFYFNVLPFAEDVRE 410
S +P + LPFA+D+RE
Sbjct: 444 STTPYLPAGLWLTPLPFADDLRE 466
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+LL +DVS SM S + K +L+Q+++I +G++ F
Sbjct: 28 KDAVLLAIDVSSSMLQPPPASNSKKADKDSAVQAALKCAYQLMQQRIISNPKDMMGILFF 87
Query: 51 GTEET--ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL 89
GTE++ + E + GY H + D+ V V++LK L
Sbjct: 88 GTEKSKFQEESGRSGLGYPHCYLFTDLDVPAAEDVKALKTL 128
>gi|392939504|ref|ZP_10305148.1| Ku protein [Thermoanaerobacter siderophilus SR4]
gi|392291254|gb|EIV99697.1| Ku protein [Thermoanaerobacter siderophilus SR4]
Length = 270
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVMETMHFPDEI 170
>gi|357614085|gb|EHJ68897.1| hypothetical protein KGM_11435 [Danaus plexippus]
Length = 594
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 216 VTIFRGDLELSEKMKIKVWVY---KKTGE--EKFPTLKKYSDKAPSTDKFATHEVKVDYE 270
+ I + + E+ + I V VY KK G+ +K L + S+ ++ K T +V D
Sbjct: 218 IAIAKINFEIGDTFNIGVSVYTLLKKAGQNNKKNINLDRESNAIVTSIK-NTLKVSNDVI 276
Query: 271 YKSVEDPSKVVPP---EQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASN 325
+ +D SK P + + +G + V + E + +K F P +KLLGF AS
Sbjct: 277 DEDSQDRSKRKVPLLKSELLHYQEFGGERVEFTDEEMKMIKNPFGP-PMMKLLGFKPASI 335
Query: 326 ILRHYYMKDVNLFIAEPGNS---RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
I + + + F+ P S +TVA AL A M VA+ R + V+V
Sbjct: 336 ICKEKWYFKIGQFLY-PNESIIEGSTVAFKALHEACTVMKMVALCILCTRVNSRPVIVA- 393
Query: 383 LTPNVSE-KINIPDSFYFNVLPFAEDVREFQ 412
L+P V +NI F +PF E VRE
Sbjct: 394 LSPCVKPLNLNIDIGFDIVNIPFVEHVRELN 424
>gi|367474269|ref|ZP_09473786.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273415|emb|CCD86254.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 309
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 276 DPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRH 329
D + VP E +KGY Q + +S E E + + +++++ F D ++I +R
Sbjct: 53 DTGEEVPSEDIVKGYELEKGQYIEVSKEELEEIALESTRTIEIDEFVDKTDIDPRYLIRP 112
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
YY++ P A + + ++EMNKVAI R V
Sbjct: 113 YYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRIV 145
>gi|50304291|ref|XP_452095.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641227|emb|CAH02488.1| KLLA0B12672p [Kluyveromyces lactis]
Length = 609
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
K YRYG V + E K + + + GF D + RHY + + + N
Sbjct: 311 KAYRYGADYVDLPMPLDEERKLSEKPGLDIRGFMDIDKLPRHYLCSESMYLVPDSKNGSK 370
Query: 348 T--VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK-INIPDSFYFNVLPF 404
+ L ++ +M ++ I R V + G + + + V +K N N LP
Sbjct: 371 GDFLGFVTLVDSLIKMKRLIIARFVPKFGNEVQMCSLFPVRVHDKDRNEVRLLVLNRLPM 430
Query: 405 AEDVREFQFP 414
+ED R FP
Sbjct: 431 SEDERNSAFP 440
>gi|256751506|ref|ZP_05492383.1| Ku protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749590|gb|EEU62617.1| Ku protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 270
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVLETMHFPDEI 170
>gi|289579044|ref|YP_003477671.1| Ku protein [Thermoanaerobacter italicus Ab9]
gi|289528757|gb|ADD03109.1| Ku protein [Thermoanaerobacter italicus Ab9]
Length = 270
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
V E+ ++GY Y P + V I + E + K++ ++ FTD I YY D FI
Sbjct: 55 VSDEEIVRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYY--DKTYFI 112
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
T L +MKE +VAI + V R Q + V V E ++ PD
Sbjct: 113 V--PEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEI 170
>gi|297545249|ref|YP_003677551.1| Ku protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843024|gb|ADH61540.1| Ku protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 270
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 284 EQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
E+ ++GY Y P + V I + E + K++ ++ FTD I YY D FI
Sbjct: 58 EEIVRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV-- 113
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
T L +MKE +VAI + V R Q + V V E ++ PD
Sbjct: 114 PEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEI 170
>gi|395326731|gb|EJF59137.1| ku70-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 657
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 312 EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
E +KLLGF + ++H + ++ E S + +AL R M K+AI
Sbjct: 391 EPGIKLLGFKGRKELAFEDNIKHSFF----IYPDEMTFSGSKRTFTALLRTMISKKKIAI 446
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREFQFPSFSKFPV 421
V + R+ + +L EK++ P F+ LPFA+D+R +
Sbjct: 447 VLALTRRNSSPIFCAMLPQE--EKVDESGWREPPGFHLIPLPFADDIRA------APVER 498
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEVLN 465
+++ +++ +EAA + L++ K P+ PNPAL N
Sbjct: 499 AFRASDELKEAARKWIDKLNV----KNGSYPPDSYPNPALAYHN 538
>gi|349580576|dbj|GAA25736.1| K7_Yku70p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 602
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + S + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSSSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|146421429|ref|XP_001486660.1| hypothetical protein PGUG_00037 [Meyerozyma guilliermondii ATCC
6260]
Length = 558
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+ G++Y ++ + + K + + +LGF + Y+ + + ++A +
Sbjct: 231 VDGFKYSNFDLIAVDESLRGLATLKTDTGLDILGFIHREKVPMAYFTSE-SFYVAPTSEA 289
Query: 346 RAT-VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-NVSEKINIPDSFYFNVLP 403
+ + V+A +A+ E++ AI R V ++ V + VL P + K +F LP
Sbjct: 290 QGNAIGVAAFCKALIELDSFAITRYV-QKANDEVQMCVLMPVKILHKDKHIYAFSMTRLP 348
Query: 404 FAEDVREFQFPSFSKFPVS 422
F ED + +FP S F +
Sbjct: 349 FKEDEKMGRFPKLSTFTTT 367
>gi|344296330|ref|XP_003419862.1| PREDICTED: X-ray repair cross-complementing protein 6 [Loxodonta
africana]
Length = 612
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 273 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM 332
+V + S ++P + + + YG + + + E E +K E + L+GF + +H+Y+
Sbjct: 306 NVNNGSLLLPSDTK-RSQSYGSRQIVLEKEETEQLKRFDEPGLTLIGFKPLIMLKKHHYL 364
Query: 333 KDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE- 389
K +LF+ E + +T SAL E +A+ R + R V +L P E
Sbjct: 365 KP-SLFVYPEESLVNGSTALFSALLTKCLEKEVMAVCRYIPRHNSPPYFV-MLVPQDEEL 422
Query: 390 ---KINI-PDSFYFNVLPFAEDVREFQF 413
KI + P F LP+A+D R+ F
Sbjct: 423 DDQKIQVTPPGFQLMFLPYADDKRKVPF 450
>gi|281311975|dbj|BAI58987.1| Ku70 protein [Colletotrichum higginsianum]
Length = 651
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E +++K ++++GF S +
Sbjct: 325 AEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFWACVK 384
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T SAL + + + KV I + R ++V ++ + +
Sbjct: 385 KSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEKSEDD 444
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 444
S +P + LPFA+D+RE P S VS E D + V+ L L
Sbjct: 445 SGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVVS------SNELIDRMRVIVQQLQLPK 497
Query: 445 SGKGEILQPELTPNPALE 462
+ + P+ PNP+L+
Sbjct: 498 A----MFNPKKYPNPSLQ 511
>gi|190344290|gb|EDK35939.2| hypothetical protein PGUG_00037 [Meyerozyma guilliermondii ATCC
6260]
Length = 558
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+ G++Y ++ + + K + + +LGF + Y+ + + ++A +
Sbjct: 231 VDGFKYSNFDLIAVDESLRGLATLKTDTGLDILGFIHREKVPMAYFTSE-SFYVAPTSEA 289
Query: 346 RAT-VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-NVSEKINIPDSFYFNVLP 403
+ + V+A +A+ E++ AI R V ++ V + VL P + K +F LP
Sbjct: 290 QGNAIGVAAFCKALIELDSFAITRYV-QKANDEVQMCVLMPVKILHKDKHIYAFSMTRLP 348
Query: 404 FAEDVREFQFPSFSKFPVS 422
F ED + +FP S F +
Sbjct: 349 FKEDEKMGRFPKLSTFTTT 367
>gi|112362565|emb|CAL36029.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ E+ + DN+ ++
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHELEYDNMKRI 480
>gi|326203361|ref|ZP_08193226.1| Ku protein [Clostridium papyrosolvens DSM 2782]
gi|325986619|gb|EGD47450.1| Ku protein [Clostridium papyrosolvens DSM 2782]
Length = 310
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V P+ ++G+ Y P + V +S ++E+++ K EK+V++L F + Y+ K
Sbjct: 52 NKEVQPDDIVRGFEYEPGKYVIMSGEDFESLQVKSEKAVEILDFVKLEEVDPVYFDKTYF 111
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVAKITIRDRESLAVIRV 153
>gi|225679444|gb|EEH17728.1| DSB repair complex subunit Ku70 [Paracoccidioides brasiliensis
Pb03]
Length = 654
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ + +++++GF S++ MK ++ +E G
Sbjct: 342 KSYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ K+N IP +
Sbjct: 402 STRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKA--KLNEYGEQMIPQGMWIL 459
Query: 401 VLPFAEDVRE 410
LPFA+D+R+
Sbjct: 460 PLPFADDIRQ 469
>gi|340385866|ref|XP_003391429.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 258
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 318 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S + H+Y+K N ++ E S +T S L R VA+ + + R
Sbjct: 1 MGFRPKSKMKMHHYIKPANFIYPDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSP 60
Query: 377 SVVVGVLTPNVSE----KINI-PDSFYFNVLPFAEDVREFQFP 414
+ V L P E I I P F+ LPF+ED+R P
Sbjct: 61 PIFVA-LVPQEEELDDSSIQISPPGFHVIFLPFSEDIRSLDLP 102
>gi|393242090|gb|EJD49609.1| Ku DNA-binding complex, Ku70 subunit [Auricularia delicata
TFB-10046 SS5]
Length = 662
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 312 EKSVKLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRC 369
E +KLLGF D + + +K +LFI E + +T +AL + + + +K A+V
Sbjct: 391 EPGLKLLGFKDRTELRFEDNVKH-SLFIYPNESAFNGSTRTFAALLQVLAKKDKFALVVG 449
Query: 370 VWRQGQQSVVVGVL-TPNVSEKIN---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
+ R ++ V +K +P F+ VLPFA+D+R S +
Sbjct: 450 ITRANSSPAFYAMIPQEEVLDKAGAQIVPPGFHLIVLPFADDIRSATVES------AEAA 503
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALEV 463
+++ ++AA L+ L++ SG P+ PNPAL++
Sbjct: 504 SDELKDAARALINKLNVK-SG----YDPKKFPNPALKL 536
>gi|335039620|ref|ZP_08532775.1| DNA repair protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180477|gb|EGL83087.1| DNA repair protein [Caldalkalibacillus thermarum TA2.A1]
Length = 270
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
V ++ +KGY Y V + E EA+ K++ ++ F I Y+ + L
Sbjct: 55 VDQDEIVKGYEYDKGHFVVLDDDELEAIAAAKSKTIDIIDFIQLKEIDPIYFNRSYFLGP 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
E G A + L RAM+E KVAI + + R +Q + V
Sbjct: 115 TENGEK----AYTLLKRAMEETEKVAIAKFILRAKEQLAAIRV 153
>gi|112362569|emb|CAL36027.1| HDF1 protein [Saccharomyces bayanus]
Length = 581
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ E+ + DN+ ++
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHELDYDNMKRI 480
>gi|112362567|emb|CAL36028.1| HDF1 protein [Saccharomyces bayanus]
gi|112362571|emb|CAL36026.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ E+ + DN+ ++
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHEVDYDNMKRI 480
>gi|380485661|emb|CCF39216.1| ATP-dependent DNA helicase II [Colletotrichum higginsianum]
Length = 498
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E +++K ++++GF S +
Sbjct: 172 AEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFWACVK 231
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T SAL + + + KV I + R ++V ++ + +
Sbjct: 232 KSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEKSEDD 291
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 444
S +P + LPFA+D+RE P S VS E D + V+ L L
Sbjct: 292 SGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVVS------SNELIDRMRVIVQQLQLPK 344
Query: 445 SGKGEILQPELTPNPALE 462
+ + P+ PNP+L+
Sbjct: 345 A----MFNPKKYPNPSLQ 358
>gi|388856813|emb|CCF49600.1| related to ATP-dependent DNA helicase II, 70 kDa subunit [Ustilago
hordei]
Length = 716
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
++ +L +D PSMH + P K + L+QKKLI + VG+++F ET
Sbjct: 39 KDMVLFCIDAGPSMHRIDPTANTSPLYFALKAAASLMQKKLISSPHDHVGLLIFNCAETL 98
Query: 57 NELTKE----VGGYEHVKVLQDIKVVDGHLVQSLKH 88
K G YE ++ ++ + V D + +++L H
Sbjct: 99 FRSAKPGEYYKGSYE-LQSVRQVNVPDTYNLKALLH 133
>gi|448509059|ref|XP_003866049.1| Yku80 Yku70p-Yku80p Ku complex subunit [Candida orthopsilosis Co
90-125]
gi|380350387|emb|CCG20609.1| Yku80 Yku70p-Yku80p Ku complex subunit [Candida orthopsilosis Co
90-125]
Length = 609
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQ-VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
E+ + V + G++Y + VV + EA + + ++GF D S + Y
Sbjct: 285 ENDKEYVKDSEYTYGFKYSQRNVVALLPELEEAATLETSPGINIMGFIDRSKLPVAYLTD 344
Query: 334 DVNLFIAEPGNSRAT---VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVS 388
+ + I PG T VA ++L +A+ E+N AIVR + ++ + + L + NV
Sbjct: 345 EPSYVI--PGAKSETENKVAFNSLVQALIELNCAAIVRYIQKEAHEVQICCALPQSINVG 402
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSF 416
EK + L ED + +FP F
Sbjct: 403 EKWG--HGLVLHRLAMKEDEKIGKFPEF 428
>gi|359788199|ref|ZP_09291179.1| ku protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359256033|gb|EHK58918.1| ku protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 278
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 275 EDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
E+ K V E ++KGY V I E +++K E ++ + GF D +++ Y K
Sbjct: 52 EETGKPVEREDQVKGYELDNGDFVLIEPEEIKSLKVTSEHTLDIEGFVDKASVQSLYLEK 111
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-------TPN 386
L+ P + +T A + + AMK +V V Q ++ VV+ L T
Sbjct: 112 PYYLY---PADRASTEAFAVVREAMKRKKRVGTASIVLYQRERPVVIEPLGNGMIMTTLR 168
Query: 387 VSEKINIPDSFYFNV--LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAP 444
++ D+ + ++ D+ E K ++ P++ + + L+++++
Sbjct: 169 NHNEVVAADTVFDDIGDRKVDPDMAEIASLIIEKKVTTFDPSKFEDRYENALIELINAKR 228
Query: 445 SGKGEILQPELTPNPALEVLNIC 467
+GK P+ P P V+N+
Sbjct: 229 AGKK---LPKAAPAPKENVINLA 248
>gi|147677577|ref|YP_001211792.1| hypothetical protein PTH_1242 [Pelotomaculum thermopropionicum SI]
gi|146273674|dbj|BAF59423.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 286
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 281 VPPEQRIKGYRY--GPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNL 337
VP ++ ++GY Y G VV ++ A++E + + ++SV++L F D + I YY K L
Sbjct: 55 VPLDEIVRGYEYEKGRYVV-LTEADFENLAGEDGKRSVEILDFVDLAEIDPLYYEKAYYL 113
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
PG+ A V L RAM E K A+ R R Q + V ++
Sbjct: 114 ---APGDGGAKV-YELLKRAMSETGKAAVARVAIRSRQSLAAIRVSG----------NAL 159
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
N++ + +++++ ++ VS NE
Sbjct: 160 VMNLMHYPDEIQKADAIPEMQYEVSLHQNE 189
>gi|342870008|gb|EGU73367.1| hypothetical protein FOXB_16128 [Fusarium oxysporum Fo5176]
Length = 644
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V S E +++K ++++GF S + +
Sbjct: 321 AEDSTRTVEKAEIKKAYKFGGEYVYFSPDEQKSLKDFGSPIIRIIGFKPRSLLPVWASTK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
K +F +E +T +AL + + + +K+ + C+ R Q ++ ++ +
Sbjct: 381 KSTFIFPSEEDYVGSTRVFTALWQKLLKDDKMGVAWCITRANAQPMLAAIIPSRERSDAD 440
Query: 393 -----IPDSFYFNVLPFAEDVREFQFPS 415
+P + LPF +D+R PS
Sbjct: 441 SGTPYLPAGLWIYPLPFQDDLRNINPPS 468
>gi|237748320|ref|ZP_04578800.1| Ku protein [Oxalobacter formigenes OXCC13]
gi|229379682|gb|EEO29773.1| Ku protein [Oxalobacter formigenes OXCC13]
Length = 262
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 271 YKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
Y+ + + E ++G++Y + V ++ + E +K + + S+ +L FTD S+I
Sbjct: 43 YRKTDGAGHELKNEDIVRGFQYEKDRYVIVTDDDIEKIKTEKDNSIDILLFTDLSSIPTV 102
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
Y+ K ++ G+ +A L RAMK+ KVAI + V G + ++ + V E
Sbjct: 103 YFNKSY-YCVSGKGSEKA---FELLQRAMKDTGKVAIGKTVI--GTKETMLAL----VPE 152
Query: 390 KINIPDSFYFNVLPFAEDVREF 411
K D L F +++RE
Sbjct: 153 K----DGILLQTLYFHDEIREI 170
>gi|6225597|sp|Q26228.1|KU70_RHIAP RecName: Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
Full=ATP-dependent DNA helicase II 70 kDa subunit;
AltName: Full=ATP-dependent DNA helicase II subunit
Ku70; AltName: Full=Ku autoantigen protein p70 homolog
gi|1063592|gb|AAC41612.1| ku autoantigen p70 homologue [Rhipicephalus appendiculatus]
gi|1587652|prf||2207188A DNA helicase II:SUBUNIT=70kD
Length = 600
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 149/384 (38%), Gaps = 38/384 (9%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--------KHLPQGTCAG 96
VG+ILFGT++ N +++V VLQD++ V L K Q G
Sbjct: 72 VGIILFGTDKDNNP-----NRFKNVYVLQDLESPGAESVLKLEKLIADGPKKFKQEYGHG 126
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
+ A V+ L+ + ++ G++ + ++T+ P K G +D+ A+ ++ G
Sbjct: 127 NVNMADVLWTCALM--FSKSRAGQRRVLVLTNQDDPHKG--SGDLDDKAVVKAKDLLQSG 182
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + +V G+ R I NL+ D L + +D
Sbjct: 183 IELD--LVHLKPPGDKKFRPQILYKNLVTDKENYEDGFPEASDKMEELLLRVRMKDHKKR 240
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA--THEVKVDYEYKSV 274
+ L ++K+ V +Y PT K P+T + A +E +
Sbjct: 241 RLMSLPFWLGPEVKMSVSLYNLVR----PTGK------PATTRLARDNNEELLSRRITYA 290
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
D ++ + P K YG + E + +K ++LLGF S + + +++
Sbjct: 291 MDSAEALMPGDISKTQEYGGRKAYFDICEVKQIKSMAPPGLQLLGFKPLSYLEKQPHVRP 350
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTPNVSEKIN 392
+ + G+ R + + A ++VA + C W R Q +V +L +
Sbjct: 351 SHFVYPDEGSVRGSTRLFAALLQSCLRHRVAPI-CFWISRAAQAPKLVYLLAQEEERDPH 409
Query: 393 ----IPDSFYFNVLPFAEDVREFQ 412
+P F+ LPF++D R Q
Sbjct: 410 GLQMVPPGFHVVQLPFSDDRRRLQ 433
>gi|320170254|gb|EFW47153.1| ATP-dependent DNA helicase II 70 kDa subunit [Capsaspora owczarzaki
ATCC 30864]
Length = 732
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 287 IKGY-RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGN 344
IK Y YG + V E ++ + + L+GF + HY +K N ++ E
Sbjct: 442 IKNYFPYGGEKVIFDPTEVREIRRFGQPGLVLMGFKPTDAVKLHYNVKTANFIYPDETVV 501
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV----SEKINI-PDSFYF 399
+T+ AL + + +KVAI R + R V L P + + + + P F+
Sbjct: 502 MGSTLLFHALLMRLADQDKVAICRFIPRINATPRFVA-LVPQLEVFDANHVQLQPPGFHV 560
Query: 400 NVLPFAEDVREFQF 413
LPFA+D+R Q+
Sbjct: 561 IYLPFADDLRSLQY 574
>gi|71022129|ref|XP_761295.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
gi|46097789|gb|EAK83022.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
Length = 713
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
++ +L +D PSMH + P K + L+QKKLI + VGV++F +T
Sbjct: 39 KDMVLFCIDAGPSMHRIDPATNTSPLYSALKAAASLMQKKLISSPHDHVGVLIFNCADTL 98
Query: 57 NELTKE----VGGYEHVKVLQDIKVVDGHLVQSLKH 88
K G YE ++ ++ + V D + +++L H
Sbjct: 99 FHSVKPGEYYKGSYE-LQSVRQVNVPDTYNLKALLH 133
>gi|301787821|ref|XP_002929325.1| PREDICTED: x-ray repair cross-complementing protein 6-like
[Ailuropoda melanoleuca]
Length = 607
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 166/439 (37%), Gaps = 55/439 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLIQ----KKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M +VE + + IQ K+I + V+ +GTE+ +
Sbjct: 33 RDSLIFLVDGSRAMFESQGEVELTPFDMSIQCIQSVYTNKIISSDQDLLAVVFYGTEKDK 92
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY--- 113
N + ++++ VLQ++ V L F D I G D + +
Sbjct: 93 NSVN-----FKNIYVLQELDNPGAKRVLELDQFKGEQGKKHFQDLIGHGSDYSLSEVLWV 147
Query: 114 -------GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K + L T+ P D + + L + ++ R
Sbjct: 148 CANLFSDVRVKMSHKRVMLFTNEDDPHGDDSAKASRARTKAGDLRDTGIFLDLMHLRKRG 207
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R II E+++L F + S + L LR R ++ + R
Sbjct: 208 GFDISLFYRDIISTAEDEDLGVHFEESSKLEDL-------LRKVR-AKETRKRVLQRLKF 259
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
+LS+ + + V +Y + K P ++ Y + P K T V ++
Sbjct: 260 KLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRTFNVNT----------GSLL 309
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-- 339
P + YG + + + E E +K E + L+GF + +H+Y++ +LF+
Sbjct: 310 LPSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYLRP-SLFVYP 368
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
E + ++ SAL E +A+ R RQ V +L P E KI + P
Sbjct: 369 EESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALL-PQEEELDDQKIQLTP 427
Query: 395 DSFYFNVLPFAEDVREFQF 413
F LP+A+D R F
Sbjct: 428 PGFQLVFLPYADDKRRVPF 446
>gi|395540722|ref|XP_003772300.1| PREDICTED: X-ray repair cross-complementing protein 6 [Sarcophilus
harrisii]
Length = 610
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 55/439 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVEK----LCSRLIQK----KLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M + + + L + IQ K+I + V+ +GT++ +
Sbjct: 34 RDSLIFLVDASKAMFELQAEDGRTSFDLTIQCIQSVYSSKIISSDRDLLAVVFYGTDKDK 93
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY--- 113
N + + ++ VL ++ + + +L F + I G D + +
Sbjct: 94 NSVN-----FRNIYVLHELDIPGAKRILALDQFKGKQGEKHFQELIGCGSDYSLAEALWV 148
Query: 114 -GETYKG------KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG--LRMKNIVV 164
+ G K + L T+ P D TK + T A + G L + N+
Sbjct: 149 CANLFSGVRLKMSHKRVMLFTNNDSP--HGDDSTKASRAKTKACDLRDTGIFLDLMNLKK 206
Query: 165 RASLSGEPHMRVIIE--NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
R II D L + ++S D +R A++TR S + R
Sbjct: 207 PGGFDISLFYRDIITPGKDEDLGVHFEESGR---LEDLLRKVR-AKETRKRS---LARLK 259
Query: 223 LELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
L L + + + + +Y + + P ++ Y + +VK+ +VE S ++
Sbjct: 260 LRLGKDVALTISIYNMVQKAFRPPPIRLYRE--------TNEQVKIKTRTFNVETGSLLL 311
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
P + + + YG + + + E E +K E + L+GF + +H++++ E
Sbjct: 312 PSDTK-RAQTYGGRQIVMEKEETEELKRFDEPGLILIGFKPLFMLKQHHFLRPSLFVYPE 370
Query: 342 PG--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
N T+ V+ L + + E +A+ R RQ V L P E ++ + P
Sbjct: 371 ESLVNGSTTLFVALLTKCL-EKGVLALCRYTPRQNSPPYFVA-LIPQEEELDVQRVQVTP 428
Query: 395 DSFYFNVLPFAEDVREFQF 413
F LP+A+D R+ F
Sbjct: 429 PGFQLVFLPYADDKRKVPF 447
>gi|365879007|ref|ZP_09418451.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292995|emb|CCD90982.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 309
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 276 DPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRH 329
D + VP E +KGY Q + +S E E + + +++++ F D ++I +R
Sbjct: 53 DTGEEVPNEDIVKGYELEKGQYIEVSKEELEEIALESTRTIEIDEFVDKTDIDPRYLIRP 112
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
YY++ P A + + ++EMNKVAI R V
Sbjct: 113 YYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRIV 145
>gi|281340934|gb|EFB16518.1| hypothetical protein PANDA_019481 [Ailuropoda melanoleuca]
Length = 582
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 166/439 (37%), Gaps = 55/439 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLIQ----KKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M +VE + + IQ K+I + V+ +GTE+ +
Sbjct: 8 RDSLIFLVDGSRAMFESQGEVELTPFDMSIQCIQSVYTNKIISSDQDLLAVVFYGTEKDK 67
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY--- 113
N + ++++ VLQ++ V L F D I G D + +
Sbjct: 68 NSVN-----FKNIYVLQELDNPGAKRVLELDQFKGEQGKKHFQDLIGHGSDYSLSEVLWV 122
Query: 114 -------GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K + L T+ P D + + L + ++ R
Sbjct: 123 CANLFSDVRVKMSHKRVMLFTNEDDPHGDDSAKASRARTKAGDLRDTGIFLDLMHLRKRG 182
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R II E+++L F + S + L LR R ++ + R
Sbjct: 183 GFDISLFYRDIISTAEDEDLGVHFEESSKLEDL-------LRKVR-AKETRKRVLQRLKF 234
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
+LS+ + + V +Y + K P ++ Y + P K T V ++
Sbjct: 235 KLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRTFNVNT----------GSLL 284
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-- 339
P + YG + + + E E +K E + L+GF + +H+Y++ +LF+
Sbjct: 285 LPSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYLRP-SLFVYP 343
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
E + ++ SAL E +A+ R RQ V +L P E KI + P
Sbjct: 344 EESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALL-PQEEELDDQKIQLTP 402
Query: 395 DSFYFNVLPFAEDVREFQF 413
F LP+A+D R F
Sbjct: 403 PGFQLVFLPYADDKRRVPF 421
>gi|323335992|gb|EGA77268.1| Yku70p [Saccharomyces cerevisiae Vin13]
Length = 537
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|151945992|gb|EDN64224.1| DNA binding protein [Saccharomyces cerevisiae YJM789]
Length = 602
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PN 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|392394601|ref|YP_006431203.1| Ku protein [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525679|gb|AFM01410.1| Ku protein [Desulfitobacterium dehalogenans ATCC 51507]
Length = 320
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 262 THEVKVDYEYKSVEDPSKV----------VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
THE +Y +K + + V E +KGY Y I E A P
Sbjct: 26 THEFHFNYLHKDCHNRLRYIKKCPHCEVEVAAENIVKGYEYEKDHYVIMEEEDLATLEAP 85
Query: 312 -EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+S+ +L F D S+I YY K L E + A L +AM + KVAI +
Sbjct: 86 MSRSIDILDFIDLSDIDPVYYQKSYYLSPEETAHK----AYKLLCQAMSDTGKVAIAKLT 141
Query: 371 WRQGQQSVVVGVLTPNV 387
R Q + V+ NV
Sbjct: 142 MRSKQHLACLRVIDQNV 158
>gi|298707354|emb|CBJ29998.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 540
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN------LFIAEPGNSRATVAVS 352
IS E +K K + LLGF +N LR D N L+ E + + A
Sbjct: 244 ISKDEMGTLKGLYPKGLTLLGFR-PNNTLR----PDFNIRSPYFLYPDEESTTGSAKAFI 298
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNVLPFAED 407
AL AM + A+ R G +V L P E++ P F VLPFA++
Sbjct: 299 ALHAAMVDKRVYALARFTRAAGAAPRMV-ALRPQEEVVEDGEQLQ-PGGFNTVVLPFADE 356
Query: 408 VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
VRE + P S V + NE AA+ +VK L L
Sbjct: 357 VREAKAPQTSDGDVKAEVNEGGVSAAEGVVKALKL 391
>gi|156407043|ref|XP_001641354.1| predicted protein [Nematostella vectensis]
gi|156228492|gb|EDO49291.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY-RYGPQVVPISSAEWEAVKFKPEKSVK 316
D + +V +Y + ++++P + IK Y ++G + + E ++K + +
Sbjct: 286 DSRTNEDCQVHTKYICKDTGAELMPTD--IKFYQKFGGEKIIFEKEEVASMKKFGDPGLL 343
Query: 317 LLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
L+GF + R Y++K + ++ E + +T SAL + + V I R + R
Sbjct: 344 LMGFKPRVTLKRFYHVKPAHFIYPDEKSITGSTTLFSALLTKCLDRDVVPICRYIPRGSA 403
Query: 376 QSVVVGVLTPNVSEKIN-----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 430
V +L P E + P F+ LPFA+D+R+ K+P + +E Q
Sbjct: 404 APSFVALL-PQEEEYDDSNVQVTPPGFHVIFLPFADDMRKL------KYPKKPEVSEDQI 456
Query: 431 EAADNLVKML 440
E A +++ L
Sbjct: 457 EKAQKIIRKL 466
>gi|112362589|emb|CAL36017.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|112362595|emb|CAL36014.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|112362579|emb|CAL36022.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|3765|emb|CAA49840.1| high affinity DNA binding protein [Saccharomyces cerevisiae]
Length = 602
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|323303481|gb|EGA57275.1| Yku70p [Saccharomyces cerevisiae FostersB]
Length = 602
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|51013177|gb|AAT92882.1| YMR284W [Saccharomyces cerevisiae]
Length = 602
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|6323940|ref|NP_014011.1| Yku70p [Saccharomyces cerevisiae S288c]
gi|1346259|sp|P32807.2|KU70_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=High affinity DNA-binding factor subunit 1
gi|287606|dbj|BAA03648.1| NES24 [Saccharomyces cerevisiae]
gi|825550|emb|CAA89782.1| Nes24p [Saccharomyces cerevisiae]
gi|112362573|emb|CAL36025.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362577|emb|CAL36023.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362581|emb|CAL36021.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362583|emb|CAL36020.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362585|emb|CAL36019.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362587|emb|CAL36018.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362591|emb|CAL36016.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362593|emb|CAL36015.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362597|emb|CAL36013.1| HDF1 protein [Saccharomyces cerevisiae]
gi|207342065|gb|EDZ69944.1| YMR284Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270684|gb|EEU05847.1| Yku70p [Saccharomyces cerevisiae JAY291]
gi|259148872|emb|CAY82117.1| Yku70p [Saccharomyces cerevisiae EC1118]
gi|285814290|tpg|DAA10185.1| TPA: Yku70p [Saccharomyces cerevisiae S288c]
gi|392297457|gb|EIW08557.1| Yku70p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 602
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|365763979|gb|EHN05505.1| Yku70p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 602
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKV 480
>gi|162450936|ref|YP_001613303.1| hypothetical protein sce2664 [Sorangium cellulosum So ce56]
gi|161161518|emb|CAN92823.1| hypothetical protein sce2664 [Sorangium cellulosum So ce56]
Length = 320
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 41/183 (22%)
Query: 287 IKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---E 341
++GY Y G VV +S + + ++V +L F DAS I YY D F+A +
Sbjct: 62 VRGYPYEKGEYVV-LSDEDLRRANVEATQTVDILDFVDASEIDPIYY--DKPYFLAPASQ 118
Query: 342 PGNSRATVAVSALAR-AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
G R+ V L R A+++ KV I + V R + + + P+ N
Sbjct: 119 NGKKRSPVTAYVLLREALRKTGKVGIAKVVIRTREH---IAAVRPHGR-------GLVLN 168
Query: 401 VLPFAEDVR---EFQFPSF-------------------SKFPVSWQPNEQQQEAADNLVK 438
+L FA ++R E P ++ +W+P + + E D+++K
Sbjct: 169 LLRFAHELRSDEELDLPEMDAQGKGLGKRELEMAERLVAEMATAWEPEKYKDEYRDDVMK 228
Query: 439 MLD 441
+++
Sbjct: 229 LIE 231
>gi|322417662|ref|YP_004196885.1| Ku protein [Geobacter sp. M18]
gi|320124049|gb|ADW11609.1| Ku protein [Geobacter sp. M18]
Length = 258
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 13/179 (7%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K VP E+ +KGY Y + + ++ ++E + + ++ F D I Y+ K
Sbjct: 52 NKEVPYEEIVKGYEYSDGEYIVLTDQDFENASLEKSHLIDIIDFIDEKEIDTRYFEKP-- 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR-QGQQSVVVGVLTPNVSEKINIPD 395
+ EP S A + L A+K KV + V R +G +V + V +I D
Sbjct: 110 -YYLEPDRS-GPKAYALLREALKRSGKVGVANYVLRNRGSLGIVRPLDNLLVLNQIRYSD 167
Query: 396 SFYFNV---LPFAEDVRE----FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
LP E++RE + V + P + + + D+L ++++ G+
Sbjct: 168 EVRDASDLKLPGDENIREQEVALALSLIDQLTVKFDPAKYRDQYIDDLKRLIEEKAQGR 226
>gi|320592811|gb|EFX05220.1| dsb repair complex subunit [Grosmannia clavigera kw1407]
Length = 685
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 42/231 (18%)
Query: 259 KFATHE-VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAE------WEAVKFKP 311
K AT E +KVD D ++ V + K Y++G + V + E WE
Sbjct: 328 KLATSETIKVD------SDSTRTVEVGEIKKAYKFGGEFVYFTPEELKGFKTWEFPDGWN 381
Query: 312 EKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K ++++GF I +K ++ +E +T SAL + +K+ KVAI V
Sbjct: 382 GKGLRIIGFKPRVLIPSWASVKRSTFIYPSEEDYVGSTRIFSALWQKLKKSEKVAIAWFV 441
Query: 371 WRQGQQSVVVGVLTPN----------------VSEKIN---IPDSFYFNVLPFAEDVREF 411
R V+V V+ N +N +P + LPFAED+R+F
Sbjct: 442 PRINTNPVLVAVIPSNGPDGGSEGDGDGSGDGEKRSVNPSHLPAGLWLYPLPFAEDIRKF 501
Query: 412 QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
S + P + E + +NL L P P PNPAL+
Sbjct: 502 D-DSRAPLPRPAELTELMKPVVENL-----LLPK---TAYDPAKYPNPALQ 543
>gi|365991283|ref|XP_003672470.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
gi|343771246|emb|CCD27227.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
Length = 620
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFK---PEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
++ +K + YG + ++ E V+ + PE +K++GF + L ++ F+
Sbjct: 351 DEYVKIFPYGDMNIELNDKEVYKVEEEISCPEAFLKIIGFRSKNQCLYYFNNITATTFVV 410
Query: 341 EPGNSRATVAVSALA---RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
P S+ ++ +A R +K+ +KVAI+ + + + +L P + N + F
Sbjct: 411 -PDESQYEGSIRTMASLFRTLKKKDKVAIIWGKMKTNSKPCLY-LLCPTSNSDRN--EGF 466
Query: 398 YFNVLPFAEDVREF 411
Y +PF E++R+F
Sbjct: 467 YLYRMPFLEEIRKF 480
>gi|376259763|ref|YP_005146483.1| Ku protein [Clostridium sp. BNL1100]
gi|373943757|gb|AEY64678.1| Ku protein [Clostridium sp. BNL1100]
Length = 311
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V PE ++G+ Y P + V ++ ++E+++ K EK+V+++ F + Y+ K
Sbjct: 52 NKEVQPEDIVRGFEYEPGKYVIMNGEDFESLQVKSEKTVEIVDFVKLEEVDPVYFDKTYF 111
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVAKITIRDRESLAVIRV 153
>gi|442805053|ref|YP_007373202.1| DNA repair protein [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740903|gb|AGC68592.1| DNA repair protein [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 274
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPGN 344
++G+ Y P V ++ A++EA K K++++L F + S I Y+ K L E G
Sbjct: 61 VRGFEYEPGHFVILNDADFEAAKGSSGGKNIEILDFVNLSEIDPVYFDKTYYLSPQETGA 120
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPF 404
A + L RAM + K+AI R R + + V ++ L +
Sbjct: 121 K----AYNLLRRAMSDTGKIAIARVTIRSKETLAALRVYK----------NALVMETLFY 166
Query: 405 AEDVREF-QFPSFSKFPVSWQPNEQQQEAADNLVKML 440
A++VR Q P P + NE++ + A L++ L
Sbjct: 167 ADEVRPAEQIPG---LPEVTETNEKELDIAVKLIESL 200
>gi|358382641|gb|EHK20312.1| hypothetical protein TRIVIDRAFT_83371 [Trichoderma virens Gv29-8]
Length = 647
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
ED ++ V ++ K Y++G + V + E + ++ ++++GF I +K
Sbjct: 325 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKNLRDFGSPIIRIIGFKKRDMIPAWASVK 384
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
+F +E ++ SAL + + +K+ + CV R Q ++ ++ +
Sbjct: 385 KSTFIFPSEEDYIGSSRVFSALWQKLLNDDKIGLAWCVLRSNAQPMIAALIPSREQSDET 444
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LP A+D+RE + + S E + +V+ L+L P G
Sbjct: 445 SGTPYLPAGLWIYPLPAADDMREIS--ADRRIDCS----EDLKTKMRVIVQQLNL-PKG- 496
Query: 448 GEILQPELTPNPALE 462
I P PNPAL+
Sbjct: 497 --IYNPLKYPNPALQ 509
>gi|220927820|ref|YP_002504729.1| Ku protein [Clostridium cellulolyticum H10]
gi|219998148|gb|ACL74749.1| Ku protein [Clostridium cellulolyticum H10]
Length = 312
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V PE ++G+ Y P + V ++ ++E+++ K EK+V+++ F + Y+ K
Sbjct: 52 NKEVQPEDIVRGFEYEPGKYVIMTGEDFESLQVKSEKTVEIIDFVKLEEVDPVYFDKTYF 111
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVSKITIRDRESLAVIRV 153
>gi|417403277|gb|JAA48451.1| Putative dna-binding subunit of a dna-dependent protein kinase ku70
autoantigen [Desmodus rotundus]
Length = 609
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 165/439 (37%), Gaps = 54/439 (12%)
Query: 5 REALLLLLDVSPSM--------HSVLPDVEKLC-SRLIQKKLIYGKNHEVGVILFGTEET 55
R++L+ L+D S +M S D+ C + K+I + V+ +GTE+
Sbjct: 33 RDSLIFLVDASKAMFIKSEDEDESTPFDISIQCIQSVYTSKIISSDRDLLAVVFYGTEKD 92
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY-- 113
+N + ++++ VLQ++ V L F D I G D + +
Sbjct: 93 KNSV-----NFKNIYVLQELDNPGAKRVLELAQFKGRQGQEHFQDRIGCGCDYSLSEVLW 147
Query: 114 --------GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+ K + L T+ P + + + + L + ++
Sbjct: 148 VCANLFSDVQVKMSHKRIMLFTNEDDPHGNDNAKASRARTKAGDLRDTGIFLDLMHLKKL 207
Query: 166 ASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
R II E ++L F + S + L LR R ++ + R
Sbjct: 208 GGFDTSLFYRDIISVAEGEDLQVHFQESSKLEDL-------LRRVR-AKETKKRALIRLK 259
Query: 223 LELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
+LS+ + + V +Y + K P ++ Y + VK +V S ++
Sbjct: 260 FKLSKDIALSVSIYNTIQKAVKSPPIRLYRE--------TNEPVKTKTRTFNVNTGSLLL 311
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
P + + + YG + + E E +K E + L+GF + +H+Y++ E
Sbjct: 312 PSDTK-RSRIYGGSHIVLEKEETEQLKRFDEPGLVLIGFKPLIMLKKHHYVRPGLFVYPE 370
Query: 342 PG--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
N +T+ + L + + E +A+ R RQ V L P E +I + P
Sbjct: 371 ESLVNGSSTLFTALLTKCL-EKEVMAVCRYTSRQNIPPYFVA-LMPQEEELDDQRIQVTP 428
Query: 395 DSFYFNVLPFAEDVREFQF 413
F+ LP+A+D R+ F
Sbjct: 429 PGFHLIFLPYADDKRKVPF 447
>gi|384221927|ref|YP_005613093.1| hypothetical protein BJ6T_82610 [Bradyrhizobium japonicum USDA 6]
gi|354960826|dbj|BAL13505.1| conserved hypothetical protein [Bradyrhizobium japonicum USDA 6]
Length = 323
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
+KVD +D VP E +KGY Q + ++ E E + + +++++ F D
Sbjct: 53 IKVD------QDTGDEVPNEDIVKGYELEKGQFIEVTKEELEEIALESTRTIEIDEFVDK 106
Query: 324 SNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
S I +R YY++ P A + + ++EMNKVAI R V
Sbjct: 107 SEIDPCYLIRPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRVV 150
>gi|27376699|ref|NP_768228.1| hypothetical protein blr1588 [Bradyrhizobium japonicum USDA 110]
gi|27349840|dbj|BAC46853.1| conserved hypothetical protein [Bradyrhizobium japonicum USDA 110]
Length = 323
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
+KVD +D VP E +KGY Q + ++ E E + + +++++ F D
Sbjct: 53 IKVD------QDTGDEVPNEDIVKGYELEKGQFIEVTKEELEEIALESTRTIEIDEFVDK 106
Query: 324 SNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
S I +R YY++ P A + + ++EMNKVAI R V
Sbjct: 107 SEIDPRYLIRPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRVV 150
>gi|190408510|gb|EDV11775.1| yeast Ku70 protein [Saccharomyces cerevisiae RM11-1a]
Length = 602
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
F +++R +FPS +S+ + + DN+ K+
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNVKKV 480
>gi|345860708|ref|ZP_08812998.1| ku protein [Desulfosporosinus sp. OT]
gi|344326204|gb|EGW37692.1| ku protein [Desulfosporosinus sp. OT]
Length = 311
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
IKGY Y Q V ++ + A++ +S+ +L F D I YY K L E
Sbjct: 61 IKGYEYDKDQYVVLNDEDLAALEQPMSRSIDILDFIDLKEIDPIYYQKSYYLSPEET--- 117
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
A A L +AM+E KVA+ R R Q + V
Sbjct: 118 -AQKAYRLLCQAMEESGKVALARVTMRSKQHLACLRVF 154
>gi|134299850|ref|YP_001113346.1| Ku domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052550|gb|ABO50521.1| DNA end-binding protein Ku [Desulfotomaculum reducens MI-1]
Length = 280
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 284 EQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
E+ +KGY Y G VV + ++E + + KS+ ++ F D ++I Y+ K L E
Sbjct: 58 EEIVKGYEYEKGKYVV-MKDEDFENLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGE 116
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ----SVVVGVLTPN 386
G L R+M+E KVA+ + + R + V GVLT N
Sbjct: 117 GGQK----VYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTIN 161
>gi|196015567|ref|XP_002117640.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
gi|190579809|gb|EDV19898.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
Length = 619
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 287 IKGYR-YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGN 344
IK Y+ +G + V E +K + + L+GF + + RHY+++ ++ E
Sbjct: 321 IKYYQTFGGERVIFEKEEVGEIKNFGKNGLTLMGFKPKNCVKRHYHVRPSYFIYPDESVI 380
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS----EKINI-PDSFYF 399
S +T VSAL + VAI + V R V L P K+ + P F
Sbjct: 381 SGSTRLVSALLERTLARDVVAICKFVPRFASGPKFVA-LVPQKEVLDEHKVQVVPPGFNV 439
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 459
LP+AED R+ K+ + P +Q + A ++VK L P+ NP
Sbjct: 440 VFLPYAEDFRQL------KYEETPAPMNEQVDKAKDIVKSLTFQ-------YNPDKFENP 486
Query: 460 ALE 462
AL+
Sbjct: 487 ALQ 489
>gi|449669934|ref|XP_004207154.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Hydra
magnipapillata]
Length = 178
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 211 RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYE 270
R VT FRG +E+ +KI + + KT EEK + KK S A S T EV +
Sbjct: 99 RSKKQVTAFRGPIEIGASLKINCYAFVKTSEEKPFSWKKLSAVAESELNCHTMEVDMRRS 158
Query: 271 YKSV-EDPSKV 280
Y + ED ++V
Sbjct: 159 YHRIDEDQTQV 169
>gi|256420043|ref|YP_003120696.1| Ku protein [Chitinophaga pinensis DSM 2588]
gi|256034951|gb|ACU58495.1| Ku protein [Chitinophaga pinensis DSM 2588]
Length = 264
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 17/147 (11%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
ED K VP EQ +KGY Y + V + +++ + K + + F + I Y+ +
Sbjct: 49 EDTGKEVPWEQIVKGYLYNDEYVILEDEDFQEASPEKSKIITIESFVELVEIDDIYF--E 106
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 394
FI EP + A L + +++ K + R V R + + ++ P
Sbjct: 107 TPYFI-EPDKA-GVKAYDLLLKTLQKTGKAGLGRFVLRTSEH---LAIIRPR-------E 154
Query: 395 DSFYFNVLPFAEDVR---EFQFPSFSK 418
D L F++++R E FPS +K
Sbjct: 155 DYLMLQQLRFSQEIRSPEELSFPSNTK 181
>gi|112362613|emb|CAL36005.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ + + DN+ K+
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKI 480
>gi|112362635|emb|CAL35994.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362637|emb|CAL35993.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362639|emb|CAL35992.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ + + DN+ K+
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKI 480
>gi|112362615|emb|CAL36004.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ + + DN+ K+
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKI 480
>gi|112362625|emb|CAL35999.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+ +K Y YG + +S + + V + + ++++GF ++ + ++ D + FI
Sbjct: 329 DNTVKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV 388
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFY 398
P ++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 389 -PDEAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFY 445
Query: 399 FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ + + DN+ K+
Sbjct: 446 LYRVPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKI 480
>gi|374572435|ref|ZP_09645531.1| Ku protein [Bradyrhizobium sp. WSM471]
gi|374420756|gb|EHR00289.1| Ku protein [Bradyrhizobium sp. WSM471]
Length = 309
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 281 VPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYMKD 334
VP E +KGY+ Q + ++ E E + + +++++ F D ++I +R YY++
Sbjct: 58 VPNEDIVKGYQLEKDQFIEVTKEELEEIALESTRTIEIDEFVDKADIDPRYLIRPYYIR- 116
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
P A + + ++EMNKVAI R V
Sbjct: 117 -------PDGKVGHDAFAVIRETIREMNKVAIGRVV 145
>gi|357010966|ref|ZP_09075965.1| Cytochrome c heme-binding site protein [Paenibacillus elgii B69]
Length = 286
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
++GY Y P V E E + + K +K+L F D S+I Y+ K L E G
Sbjct: 61 VRGYEYEPGSFVLFEKDELEKLTGEVTKEIKILDFVDLSDIDPVYFQKTYYLAPNETGAG 120
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS-EKINIPDSF----YFN 400
A S L AM++ K+ I + R + ++ ++ E I PD +
Sbjct: 121 ----AYSLLLEAMRQTGKIGIAKVSIRSKSSLAAIRIIDRCIAMETIFYPDEIRSVEHVP 176
Query: 401 VLPFAEDVREFQFPS----FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
LP +V E + + +++P + + + +++ ++ SG+ + PE
Sbjct: 177 NLPEQNNVNEKELEMAKLLIGQLATTFEPEKYKDDYRSAVLQAIESKVSGQQVRIAPE 234
>gi|112362623|emb|CAL36000.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+ +K Y YG + +S + + V + + ++++GF ++ + ++ D + FI
Sbjct: 329 DNTVKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV 388
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFY 398
P ++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 389 -PDEAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFY 445
Query: 399 FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+PF +++R +FPS +S+ + + DN+ K+
Sbjct: 446 LYRVPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKI 480
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,404,746,992
Number of Sequences: 23463169
Number of extensions: 307977163
Number of successful extensions: 711982
Number of sequences better than 100.0: 742
Number of HSP's better than 100.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 519
Number of HSP's that attempted gapping in prelim test: 710376
Number of HSP's gapped (non-prelim): 1091
length of query: 475
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 329
effective length of database: 8,933,572,693
effective search space: 2939145415997
effective search space used: 2939145415997
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)