Query 011882
Match_columns 475
No_of_seqs 521 out of 2193
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 06:16:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011882.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011882hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1163 Casein kinase (serine/ 100.0 3.1E-60 6.8E-65 432.9 21.0 294 3-297 11-304 (341)
2 KOG1165 Casein kinase (serine/ 100.0 2.2E-58 4.8E-63 437.8 24.2 291 4-295 25-317 (449)
3 KOG0581 Mitogen-activated prot 100.0 1.6E-49 3.4E-54 384.3 20.2 253 7-281 79-340 (364)
4 KOG0615 Serine/threonine prote 100.0 8.1E-50 1.8E-54 389.0 16.3 259 4-279 169-440 (475)
5 KOG0575 Polo-like serine/threo 100.0 1E-48 2.3E-53 398.4 25.0 256 7-286 18-279 (592)
6 KOG0595 Serine/threonine-prote 100.0 4.4E-48 9.5E-53 377.3 20.5 251 4-270 7-265 (429)
7 KOG0592 3-phosphoinositide-dep 100.0 2E-47 4.3E-52 383.4 23.4 268 5-295 71-350 (604)
8 KOG0598 Ribosomal protein S6 k 100.0 7.1E-48 1.5E-52 372.7 19.3 266 5-300 23-298 (357)
9 KOG0591 NIMA (never in mitosis 100.0 8.3E-48 1.8E-52 358.5 10.3 243 7-267 19-275 (375)
10 KOG0593 Predicted protein kina 100.0 1E-46 2.2E-51 354.4 16.1 253 7-271 2-282 (396)
11 KOG0192 Tyrosine kinase specif 100.0 2.6E-45 5.6E-50 369.5 25.6 256 7-282 41-308 (362)
12 KOG0661 MAPK related serine/th 100.0 1.4E-46 3E-51 372.0 13.4 264 4-282 7-297 (538)
13 KOG0600 Cdc2-related protein k 100.0 9.9E-46 2.2E-50 368.4 18.9 258 3-271 113-398 (560)
14 KOG0583 Serine/threonine prote 100.0 2.6E-44 5.7E-49 364.9 26.8 248 4-271 14-273 (370)
15 KOG0616 cAMP-dependent protein 100.0 4.1E-45 8.9E-50 342.9 17.8 269 5-302 42-316 (355)
16 KOG0198 MEKK and related serin 100.0 3.4E-45 7.3E-50 358.8 18.0 258 7-281 17-281 (313)
17 KOG0197 Tyrosine kinases [Sign 100.0 3.8E-45 8.3E-50 368.7 18.2 253 9-280 208-464 (468)
18 KOG0605 NDR and related serine 100.0 1E-44 2.2E-49 364.1 19.2 272 6-295 140-457 (550)
19 KOG0694 Serine/threonine prote 100.0 4.7E-44 1E-48 368.2 19.8 271 5-303 366-644 (694)
20 KOG0588 Serine/threonine prote 100.0 1E-43 2.2E-48 363.2 20.6 252 6-282 11-269 (786)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.3E-43 1.2E-47 353.1 25.4 261 5-280 5-337 (338)
22 KOG0659 Cdk activating kinase 100.0 2.4E-43 5.2E-48 326.6 18.7 253 7-271 2-279 (318)
23 KOG0193 Serine/threonine prote 100.0 6E-44 1.3E-48 362.2 15.3 257 6-279 391-655 (678)
24 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-42 4.1E-47 341.5 25.5 253 7-271 5-283 (288)
25 KOG0582 Ste20-like serine/thre 100.0 1.9E-42 4.2E-47 340.4 25.0 265 4-282 23-299 (516)
26 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-42 4.9E-47 340.4 24.9 243 8-267 1-250 (285)
27 KOG0663 Protein kinase PITSLRE 100.0 2.9E-43 6.3E-48 335.0 17.5 256 4-271 73-359 (419)
28 KOG0578 p21-activated serine/t 100.0 2E-43 4.2E-48 357.2 17.1 252 7-280 273-527 (550)
29 KOG0597 Serine-threonine prote 100.0 1.8E-43 3.8E-48 355.1 15.8 251 7-281 2-256 (808)
30 PTZ00263 protein kinase A cata 100.0 4.1E-42 8.8E-47 346.0 25.8 238 6-267 17-260 (329)
31 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-42 2.7E-47 343.5 21.6 236 7-266 1-242 (291)
32 cd07848 STKc_CDKL5 Catalytic d 100.0 4E-42 8.7E-47 338.1 25.1 254 7-271 1-282 (287)
33 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-42 3.2E-47 349.4 22.0 246 7-271 1-255 (333)
34 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1E-41 2.2E-46 338.6 27.7 252 6-271 4-286 (303)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 4.7E-42 1E-46 341.0 24.8 261 5-275 3-303 (304)
36 KOG0201 Serine/threonine prote 100.0 5.6E-44 1.2E-48 351.0 10.3 254 6-282 12-269 (467)
37 PHA02882 putative serine/threo 100.0 1.5E-41 3.3E-46 336.3 27.8 259 4-274 9-293 (294)
38 cd07862 STKc_CDK6 Catalytic do 100.0 1E-41 2.2E-46 335.7 26.4 251 7-271 1-285 (290)
39 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1E-41 2.2E-46 343.2 25.9 254 8-271 1-288 (338)
40 KOG0667 Dual-specificity tyros 100.0 2.1E-42 4.5E-47 355.8 20.8 206 5-221 184-395 (586)
41 cd05571 STKc_PKB Catalytic dom 100.0 3.2E-42 7E-47 345.7 21.7 237 13-270 1-248 (323)
42 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-41 2.9E-46 341.3 24.6 240 8-267 1-246 (324)
43 PTZ00036 glycogen synthase kin 100.0 2.6E-41 5.7E-46 353.2 27.2 253 5-271 64-349 (440)
44 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-41 3.5E-46 330.7 23.9 254 6-277 4-265 (266)
45 PHA03212 serine/threonine kina 100.0 2.5E-41 5.5E-46 348.1 25.9 250 6-271 91-374 (391)
46 cd05106 PTKc_CSF-1R Catalytic 100.0 1.8E-41 3.9E-46 347.4 24.4 257 7-278 38-373 (374)
47 cd05595 STKc_PKB_beta Catalyti 100.0 5E-41 1.1E-45 337.2 27.1 237 13-270 1-248 (323)
48 cd05585 STKc_YPK1_like Catalyt 100.0 5.3E-42 1.1E-46 342.5 19.7 243 15-278 1-249 (312)
49 cd05589 STKc_PKN Catalytic dom 100.0 3.3E-41 7.2E-46 338.5 25.5 240 9-268 1-247 (324)
50 cd06650 PKc_MEK1 Catalytic dom 100.0 3E-41 6.5E-46 340.3 24.8 271 5-293 3-317 (333)
51 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.5E-41 1.4E-45 333.7 26.4 254 6-271 5-284 (309)
52 cd07863 STKc_CDK4 Catalytic do 100.0 8.7E-41 1.9E-45 328.6 26.8 253 8-271 1-283 (288)
53 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.8E-42 1.7E-46 345.9 20.0 255 7-272 1-284 (350)
54 cd05614 STKc_MSK2_N N-terminal 100.0 3E-41 6.6E-46 339.7 24.1 245 8-268 1-257 (332)
55 cd05628 STKc_NDR1 Catalytic do 100.0 3.5E-41 7.5E-46 343.8 24.6 268 7-295 1-305 (363)
56 cd05616 STKc_cPKC_beta Catalyt 100.0 3.3E-41 7.2E-46 338.3 24.1 240 8-267 1-246 (323)
57 KOG0660 Mitogen-activated prot 100.0 8.3E-42 1.8E-46 329.4 18.6 261 5-279 20-313 (359)
58 PTZ00284 protein kinase; Provi 100.0 4.5E-41 9.7E-46 354.3 25.6 255 6-271 128-436 (467)
59 KOG0033 Ca2+/calmodulin-depend 100.0 1.9E-43 4.1E-48 323.5 6.5 252 4-270 8-264 (355)
60 cd05599 STKc_NDR_like Catalyti 100.0 1.9E-41 4.1E-46 345.5 21.8 260 7-277 1-297 (364)
61 cd06649 PKc_MEK2 Catalytic dom 100.0 8.2E-41 1.8E-45 336.7 26.2 259 5-281 3-306 (331)
62 PTZ00426 cAMP-dependent protei 100.0 4.6E-41 1E-45 340.0 24.1 242 5-270 28-281 (340)
63 cd05592 STKc_nPKC_theta_delta 100.0 9E-41 2E-45 334.3 25.6 236 13-268 1-242 (316)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 4E-41 8.6E-46 338.7 23.0 238 13-271 1-249 (328)
65 cd05104 PTKc_Kit Catalytic dom 100.0 6E-41 1.3E-45 343.6 24.3 256 7-277 35-374 (375)
66 KOG0585 Ca2+/calmodulin-depend 100.0 8.8E-42 1.9E-46 337.6 17.0 254 3-271 93-370 (576)
67 PLN00034 mitogen-activated pro 100.0 3.5E-41 7.7E-46 342.3 22.0 246 6-272 73-327 (353)
68 cd07876 STKc_JNK2 Catalytic do 100.0 8.5E-41 1.8E-45 340.2 24.6 252 4-271 18-313 (359)
69 KOG0596 Dual specificity; seri 100.0 4.7E-42 1E-46 344.7 15.0 251 6-271 360-625 (677)
70 KOG0589 Serine/threonine prote 100.0 6.6E-42 1.4E-46 344.0 16.0 249 6-273 3-258 (426)
71 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-41 3.3E-46 341.5 18.6 248 7-270 1-260 (330)
72 KOG0610 Putative serine/threon 100.0 2E-41 4.4E-46 330.7 18.8 269 7-296 77-405 (459)
73 cd05598 STKc_LATS Catalytic do 100.0 3.7E-41 8.1E-46 345.0 21.7 253 7-270 1-298 (376)
74 cd05626 STKc_LATS2 Catalytic d 100.0 5.8E-41 1.3E-45 344.3 23.1 255 7-271 1-303 (381)
75 cd05629 STKc_NDR_like_fungal C 100.0 4E-41 8.7E-46 345.0 21.7 253 7-270 1-302 (377)
76 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-40 3.4E-45 333.6 25.5 241 8-268 1-247 (323)
77 cd05602 STKc_SGK1 Catalytic do 100.0 6.8E-41 1.5E-45 336.3 22.9 256 13-295 1-263 (325)
78 cd05605 STKc_GRK4_like Catalyt 100.0 1.2E-40 2.5E-45 328.2 24.1 242 8-266 1-249 (285)
79 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-40 3.4E-45 322.9 24.4 255 6-278 5-263 (263)
80 cd05620 STKc_nPKC_delta Cataly 100.0 1.2E-40 2.7E-45 333.3 24.2 236 13-268 1-242 (316)
81 cd05048 PTKc_Ror Catalytic Dom 100.0 9.2E-41 2E-45 327.6 22.4 254 6-276 4-282 (283)
82 KOG0611 Predicted serine/threo 100.0 7.2E-42 1.6E-46 331.8 14.2 245 5-272 51-302 (668)
83 KOG1164 Casein kinase (serine/ 100.0 7.3E-40 1.6E-44 328.7 29.3 289 4-295 14-315 (322)
84 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-40 3.1E-45 335.0 24.3 250 7-270 1-263 (331)
85 KOG1989 ARK protein kinase fam 100.0 1.2E-40 2.6E-45 352.7 24.7 262 7-282 37-316 (738)
86 cd05109 PTKc_HER2 Catalytic do 100.0 2.4E-40 5.3E-45 324.3 25.1 261 1-279 1-270 (279)
87 cd05590 STKc_nPKC_eta Catalyti 100.0 1.3E-40 2.8E-45 333.8 23.7 237 13-269 1-243 (320)
88 KOG0658 Glycogen synthase kina 100.0 9.5E-42 2.1E-46 329.6 14.8 250 8-271 25-304 (364)
89 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-40 2.5E-45 334.1 23.2 235 13-267 1-241 (321)
90 cd05575 STKc_SGK Catalytic dom 100.0 1.9E-40 4.1E-45 332.8 24.6 235 13-268 1-242 (323)
91 PHA02988 hypothetical protein; 100.0 2.6E-40 5.5E-45 325.9 25.0 242 13-278 26-280 (283)
92 cd05594 STKc_PKB_alpha Catalyt 100.0 5.1E-41 1.1E-45 337.2 20.2 238 13-271 1-250 (325)
93 PTZ00283 serine/threonine prot 100.0 3E-40 6.5E-45 349.7 27.1 252 4-272 29-296 (496)
94 KOG0594 Protein kinase PCTAIRE 100.0 8.8E-41 1.9E-45 323.1 20.6 254 8-272 12-301 (323)
95 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-40 2.9E-45 340.4 23.1 248 6-270 42-301 (370)
96 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-40 4E-45 336.9 23.6 253 5-272 33-292 (382)
97 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-40 2.6E-45 342.0 22.5 249 7-266 1-295 (382)
98 cd05618 STKc_aPKC_iota Catalyt 100.0 3.4E-40 7.4E-45 332.0 25.0 264 13-297 1-276 (329)
99 PHA03207 serine/threonine kina 100.0 3.2E-40 6.9E-45 340.2 25.3 255 4-272 89-374 (392)
100 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-40 2.5E-45 335.7 21.3 244 7-265 1-255 (331)
101 KOG4278 Protein tyrosine kinas 100.0 9.3E-41 2E-45 337.7 20.4 257 9-283 269-529 (1157)
102 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-40 3.8E-45 333.8 22.4 264 13-297 1-274 (327)
103 cd05588 STKc_aPKC Catalytic do 100.0 1.2E-40 2.5E-45 335.4 21.0 239 13-268 1-251 (329)
104 cd05619 STKc_nPKC_theta Cataly 100.0 3.5E-40 7.5E-45 330.2 24.2 236 13-268 1-242 (316)
105 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-40 4.3E-45 334.0 22.4 250 7-270 1-263 (332)
106 cd08228 STKc_Nek6 Catalytic do 100.0 9.6E-40 2.1E-44 317.4 26.1 255 7-277 2-265 (267)
107 cd05627 STKc_NDR2 Catalytic do 100.0 1.3E-40 2.9E-45 339.0 21.1 271 7-295 1-305 (360)
108 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-40 8.4E-45 323.7 23.5 236 15-267 1-246 (280)
109 cd07853 STKc_NLK Catalytic dom 100.0 3.3E-40 7.2E-45 337.6 23.8 257 8-279 1-291 (372)
110 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.7E-40 3.7E-45 335.7 21.4 251 4-271 12-296 (343)
111 KOG4721 Serine/threonine prote 100.0 1.2E-41 2.7E-46 341.6 12.9 236 12-274 129-365 (904)
112 cd05570 STKc_PKC Catalytic dom 100.0 3.4E-40 7.5E-45 330.3 23.4 235 13-267 1-241 (318)
113 cd05584 STKc_p70S6K Catalytic 100.0 3.4E-40 7.4E-45 331.1 23.4 238 12-270 1-253 (323)
114 cd07875 STKc_JNK1 Catalytic do 100.0 3.9E-40 8.4E-45 336.0 24.1 248 5-271 22-316 (364)
115 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-40 1.1E-44 328.4 24.4 258 4-279 4-270 (316)
116 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.6E-40 1.2E-44 338.8 25.1 258 6-278 36-398 (400)
117 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-39 2.2E-44 323.8 26.0 255 6-272 5-285 (301)
118 cd05072 PTKc_Lyn Catalytic dom 100.0 4.4E-40 9.6E-45 318.9 22.8 252 6-276 5-260 (261)
119 cd05582 STKc_RSK_N N-terminal 100.0 1.5E-40 3.3E-45 332.7 20.0 244 12-276 1-254 (318)
120 cd07874 STKc_JNK3 Catalytic do 100.0 5.7E-40 1.2E-44 333.5 24.4 252 4-271 14-309 (355)
121 cd05607 STKc_GRK7 Catalytic do 100.0 3.3E-40 7.2E-45 323.7 21.8 240 15-271 1-248 (277)
122 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-39 2.3E-44 317.3 25.1 255 6-277 3-265 (266)
123 cd05621 STKc_ROCK2 Catalytic d 100.0 3E-40 6.6E-45 337.8 22.2 250 5-271 41-302 (370)
124 cd05054 PTKc_VEGFR Catalytic d 100.0 6.7E-40 1.5E-44 331.1 24.3 260 6-280 6-336 (337)
125 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-39 2.5E-44 315.3 24.8 249 7-274 4-255 (256)
126 PTZ00267 NIMA-related protein 100.0 2.2E-39 4.8E-44 342.1 29.2 249 7-272 67-322 (478)
127 cd05090 PTKc_Ror1 Catalytic do 100.0 6.1E-40 1.3E-44 322.1 23.2 253 7-276 5-282 (283)
128 cd05049 PTKc_Trk Catalytic dom 100.0 4.3E-40 9.4E-45 322.1 22.0 253 6-275 4-279 (280)
129 KOG4717 Serine/threonine prote 100.0 1.1E-40 2.3E-45 331.6 17.7 250 2-271 13-268 (864)
130 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.1E-40 2E-44 320.1 24.2 256 6-275 5-276 (277)
131 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-39 2.8E-44 320.8 25.3 243 8-267 1-250 (285)
132 cd05071 PTKc_Src Catalytic dom 100.0 1.2E-39 2.6E-44 316.8 24.6 254 5-278 4-261 (262)
133 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-39 4.7E-44 319.4 26.7 258 6-280 4-282 (288)
134 cd05622 STKc_ROCK1 Catalytic d 100.0 6.1E-40 1.3E-44 335.7 23.3 247 6-270 42-301 (371)
135 cd06646 STKc_MAP4K5 Catalytic 100.0 8.3E-40 1.8E-44 318.1 23.0 253 4-272 6-264 (267)
136 PF00069 Pkinase: Protein kina 100.0 7.5E-40 1.6E-44 316.1 22.5 250 9-272 1-256 (260)
137 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-39 3.1E-44 320.6 24.8 242 8-266 1-249 (285)
138 KOG1026 Nerve growth factor re 100.0 1.2E-40 2.7E-45 351.2 18.1 258 7-281 486-766 (774)
139 cd05603 STKc_SGK2 Catalytic do 100.0 1.2E-39 2.6E-44 326.7 24.5 235 13-268 1-242 (321)
140 cd05062 PTKc_IGF-1R Catalytic 100.0 9E-40 2E-44 320.0 23.0 255 4-275 3-276 (277)
141 cd07868 STKc_CDK8 Catalytic do 100.0 2.1E-39 4.6E-44 323.7 26.2 255 12-272 6-313 (317)
142 PHA03211 serine/threonine kina 100.0 2.3E-39 5E-44 338.8 27.5 253 5-272 167-454 (461)
143 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-39 3E-44 321.3 24.4 258 6-280 4-285 (291)
144 KOG4279 Serine/threonine prote 100.0 2.5E-40 5.4E-45 338.2 19.4 251 13-282 581-838 (1226)
145 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2E-39 4.3E-44 318.5 25.1 258 7-278 3-282 (283)
146 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-39 2.8E-44 321.1 23.8 256 8-280 1-289 (290)
147 cd05089 PTKc_Tie1 Catalytic do 100.0 2.5E-39 5.3E-44 320.6 25.9 257 7-282 2-280 (297)
148 cd07861 STKc_CDK1_euk Catalyti 100.0 3.5E-39 7.6E-44 316.5 26.4 253 8-272 1-281 (285)
149 cd05604 STKc_SGK3 Catalytic do 100.0 5.2E-40 1.1E-44 329.9 21.0 236 13-269 1-243 (325)
150 cd05091 PTKc_Ror2 Catalytic do 100.0 9.9E-40 2.1E-44 320.5 22.4 253 7-276 5-282 (283)
151 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-39 3.8E-44 314.9 23.8 248 14-278 2-256 (257)
152 cd05066 PTKc_EphR_A Catalytic 100.0 2E-39 4.4E-44 315.8 24.3 256 6-277 3-266 (267)
153 cd05068 PTKc_Frk_like Catalyti 100.0 2.8E-39 6.1E-44 313.5 25.2 253 6-277 5-261 (261)
154 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.1E-39 6.6E-44 321.4 26.0 261 6-282 17-304 (307)
155 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-39 3.8E-44 313.1 23.4 246 13-275 1-251 (252)
156 PTZ00266 NIMA-related protein 100.0 1.3E-38 2.8E-43 350.2 33.3 253 3-272 9-294 (1021)
157 PHA03209 serine/threonine kina 100.0 1.9E-39 4.2E-44 330.3 25.0 249 6-271 65-349 (357)
158 cd05035 PTKc_Axl_like Catalyti 100.0 2E-39 4.2E-44 315.8 23.8 252 9-277 1-272 (273)
159 cd06613 STKc_MAP4K3_like Catal 100.0 3.5E-39 7.6E-44 312.1 25.5 251 7-272 3-259 (262)
160 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-39 7.9E-44 311.4 25.5 246 8-272 1-251 (255)
161 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.3E-39 1.4E-43 311.2 27.1 255 7-277 2-265 (267)
162 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-39 2.4E-44 321.9 22.1 257 6-275 4-295 (296)
163 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.7E-39 3.8E-44 314.6 22.9 249 7-274 4-255 (256)
164 cd05082 PTKc_Csk Catalytic dom 100.0 1.9E-39 4E-44 313.9 23.0 246 7-276 6-255 (256)
165 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.6E-39 5.7E-44 313.5 23.8 253 4-276 3-259 (260)
166 cd08529 STKc_FA2-like Catalyti 100.0 4.4E-39 9.6E-44 310.3 25.2 246 8-272 1-252 (256)
167 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-39 5.3E-44 313.4 23.5 247 13-277 1-255 (257)
168 cd05059 PTKc_Tec_like Catalyti 100.0 2.5E-39 5.3E-44 313.2 23.4 249 7-274 4-255 (256)
169 cd05057 PTKc_EGFR_like Catalyt 100.0 5E-39 1.1E-43 315.0 25.7 262 1-280 1-271 (279)
170 KOG0580 Serine/threonine prote 100.0 1.3E-40 2.9E-45 304.3 13.4 244 6-271 21-271 (281)
171 cd05088 PTKc_Tie2 Catalytic do 100.0 2.8E-39 6.1E-44 321.4 24.2 258 6-282 6-285 (303)
172 cd05075 PTKc_Axl Catalytic dom 100.0 3.1E-39 6.7E-44 314.7 24.0 252 9-277 1-271 (272)
173 cd05097 PTKc_DDR_like Catalyti 100.0 1.6E-39 3.5E-44 321.4 22.3 259 7-275 5-294 (295)
174 cd08229 STKc_Nek7 Catalytic do 100.0 2.5E-39 5.5E-44 314.4 23.3 255 7-277 2-265 (267)
175 cd05065 PTKc_EphR_B Catalytic 100.0 3.3E-39 7E-44 314.5 24.0 258 6-277 3-268 (269)
176 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-39 5.2E-44 320.3 23.3 260 6-275 4-295 (296)
177 cd07839 STKc_CDK5 Catalytic do 100.0 2.6E-39 5.6E-44 317.5 23.2 251 8-272 1-280 (284)
178 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.8E-39 8.3E-44 313.6 24.1 257 5-277 3-267 (268)
179 cd05111 PTK_HER3 Pseudokinase 100.0 7.2E-39 1.6E-43 314.4 26.1 256 6-279 6-270 (279)
180 cd05055 PTKc_PDGFR Catalytic d 100.0 6.3E-39 1.4E-43 318.8 26.0 258 5-277 33-301 (302)
181 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-39 2.5E-44 315.7 20.1 251 6-276 5-260 (261)
182 cd06645 STKc_MAP4K3 Catalytic 100.0 1.8E-39 3.8E-44 315.8 21.2 251 6-272 8-264 (267)
183 cd06619 PKc_MKK5 Catalytic dom 100.0 3.6E-39 7.9E-44 316.3 23.3 244 7-272 1-252 (279)
184 cd05053 PTKc_FGFR Catalytic do 100.0 4.8E-39 1E-43 317.2 24.1 257 6-278 11-292 (293)
185 cd05061 PTKc_InsR Catalytic do 100.0 6.2E-39 1.3E-43 316.1 24.9 257 5-278 4-279 (288)
186 cd05043 PTK_Ryk Pseudokinase d 100.0 6.5E-39 1.4E-43 314.2 24.9 259 5-280 4-279 (280)
187 cd05101 PTKc_FGFR2 Catalytic d 100.0 8E-39 1.7E-43 317.8 25.6 260 5-280 13-299 (304)
188 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.9E-39 1.3E-43 324.8 25.0 260 6-280 6-342 (343)
189 cd06625 STKc_MEKK3_like Cataly 100.0 6E-39 1.3E-43 310.9 24.0 250 7-272 2-259 (263)
190 PRK13184 pknD serine/threonine 100.0 8.9E-39 1.9E-43 350.1 28.0 263 7-280 2-293 (932)
191 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-39 1.2E-43 331.2 25.1 257 7-278 37-400 (401)
192 cd05586 STKc_Sck1_like Catalyt 100.0 9.9E-40 2.1E-44 328.5 18.8 235 15-267 1-243 (330)
193 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.5E-38 3.2E-43 320.5 27.3 262 5-282 10-298 (334)
194 cd05032 PTKc_InsR_like Catalyt 100.0 6E-39 1.3E-43 313.5 23.3 254 5-275 4-276 (277)
195 KOG1187 Serine/threonine prote 100.0 3E-39 6.5E-44 327.1 21.8 259 6-278 74-353 (361)
196 cd07847 STKc_CDKL1_4 Catalytic 100.0 2E-38 4.3E-43 311.0 27.1 252 7-271 1-281 (286)
197 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.2E-39 1.3E-43 310.9 23.1 253 4-276 3-259 (260)
198 cd06637 STKc_TNIK Catalytic do 100.0 8E-39 1.7E-43 311.8 23.9 251 5-272 4-268 (272)
199 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-38 2.4E-43 309.4 24.6 252 5-276 4-259 (260)
200 cd06644 STKc_STK10_LOK Catalyt 100.0 7.8E-39 1.7E-43 315.9 24.0 250 5-271 10-267 (292)
201 cd06628 STKc_MAPKKK_Byr2_like 100.0 1E-38 2.2E-43 310.2 24.4 251 8-272 1-263 (267)
202 KOG2345 Serine/threonine prote 100.0 1.5E-40 3.4E-45 305.2 10.8 264 6-278 20-301 (302)
203 cd05034 PTKc_Src_like Catalyti 100.0 9.4E-39 2E-43 309.4 23.8 254 4-276 3-260 (261)
204 PF07714 Pkinase_Tyr: Protein 100.0 4.4E-39 9.6E-44 312.8 21.3 248 10-274 2-259 (259)
205 cd07867 STKc_CDC2L6 Catalytic 100.0 8E-39 1.7E-43 319.2 23.6 254 12-271 6-312 (317)
206 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.3E-38 4.9E-43 316.3 26.7 260 6-281 11-297 (314)
207 cd05092 PTKc_TrkA Catalytic do 100.0 8.2E-39 1.8E-43 314.0 22.8 253 6-275 4-279 (280)
208 cd06612 STKc_MST1_2 Catalytic 100.0 6.2E-39 1.3E-43 309.3 21.6 250 6-272 2-252 (256)
209 KOG0574 STE20-like serine/thre 100.0 1.1E-41 2.3E-46 319.9 2.0 258 8-285 34-292 (502)
210 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-38 2.5E-43 308.1 23.3 247 6-276 5-255 (256)
211 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.2E-38 2.5E-43 312.4 23.5 249 7-272 1-260 (283)
212 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.9E-39 1.9E-43 314.2 22.7 248 7-272 1-261 (286)
213 cd06643 STKc_SLK Catalytic dom 100.0 1E-38 2.2E-43 313.3 23.0 247 8-271 6-260 (282)
214 cd05060 PTKc_Syk_like Catalyti 100.0 1.7E-38 3.7E-43 307.3 24.1 247 13-277 1-255 (257)
215 cd05083 PTKc_Chk Catalytic dom 100.0 9.3E-39 2E-43 308.6 22.1 246 6-276 5-253 (254)
216 cd07844 STKc_PCTAIRE_like Cata 100.0 3E-38 6.4E-43 311.2 26.0 253 6-272 4-287 (291)
217 cd00192 PTKc Catalytic domain 100.0 1.4E-38 3.1E-43 306.6 23.0 245 13-274 1-261 (262)
218 cd08223 STKc_Nek4 Catalytic do 100.0 4.7E-38 1E-42 303.5 26.6 246 8-272 1-253 (257)
219 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-38 6.9E-43 309.6 25.6 254 8-272 1-281 (286)
220 cd07837 STKc_CdkB_plant Cataly 100.0 3.7E-38 8E-43 310.9 26.2 252 7-271 1-289 (295)
221 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-38 2.6E-43 320.2 23.1 255 10-272 1-306 (327)
222 cd05110 PTKc_HER4 Catalytic do 100.0 1.9E-38 4.1E-43 315.3 23.9 259 4-280 4-271 (303)
223 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7E-39 1.5E-43 315.0 20.5 257 8-277 5-283 (284)
224 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.5E-38 3.2E-43 311.9 22.8 250 6-272 15-278 (282)
225 cd06615 PKc_MEK Catalytic doma 100.0 3.8E-38 8.2E-43 314.0 26.0 256 7-280 1-291 (308)
226 cd06654 STKc_PAK1 Catalytic do 100.0 4.6E-38 9.9E-43 311.6 26.3 248 6-272 19-269 (296)
227 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.5E-38 1.2E-42 309.5 26.7 252 6-271 4-286 (291)
228 cd05609 STKc_MAST Catalytic do 100.0 2.4E-38 5.2E-43 314.7 24.3 261 7-278 1-275 (305)
229 cd08221 STKc_Nek9 Catalytic do 100.0 6.6E-38 1.4E-42 302.6 26.7 246 8-272 1-252 (256)
230 cd07845 STKc_CDK10 Catalytic d 100.0 4.3E-38 9.3E-43 313.3 26.0 252 5-271 5-288 (309)
231 cd05050 PTKc_Musk Catalytic do 100.0 1.7E-38 3.8E-43 312.6 22.9 253 6-275 4-287 (288)
232 cd06638 STKc_myosinIIIA Cataly 100.0 3.7E-38 8E-43 309.6 25.2 253 4-272 15-282 (286)
233 cd07841 STKc_CDK7 Catalytic do 100.0 3.9E-38 8.4E-43 311.5 25.5 253 8-272 1-281 (298)
234 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.1E-38 4.6E-43 311.2 23.4 260 6-277 3-283 (284)
235 cd07831 STKc_MOK Catalytic dom 100.0 5E-38 1.1E-42 307.6 26.0 251 9-272 1-278 (282)
236 KOG0194 Protein tyrosine kinas 100.0 2E-39 4.2E-44 331.8 16.6 257 6-281 156-424 (474)
237 cd06609 STKc_MST3_like Catalyt 100.0 2.4E-38 5.2E-43 309.2 23.5 245 7-272 1-250 (274)
238 KOG0599 Phosphorylase kinase g 100.0 5.5E-40 1.2E-44 304.9 11.2 249 6-271 16-281 (411)
239 cd06611 STKc_SLK_like Catalyti 100.0 9.5E-39 2.1E-43 313.0 20.7 249 6-271 4-260 (280)
240 cd06655 STKc_PAK2 Catalytic do 100.0 5.4E-38 1.2E-42 311.2 26.3 247 6-271 18-267 (296)
241 cd06630 STKc_MEKK1 Catalytic d 100.0 2E-38 4.4E-43 308.0 22.8 253 8-271 1-262 (268)
242 cd07849 STKc_ERK1_2_like Catal 100.0 2E-38 4.3E-43 319.8 23.5 257 5-272 3-291 (336)
243 cd05056 PTKc_FAK Catalytic dom 100.0 3.1E-38 6.8E-43 307.7 24.1 256 6-280 5-268 (270)
244 KOG1095 Protein tyrosine kinas 100.0 1.7E-38 3.7E-43 345.9 24.4 258 7-281 692-965 (1025)
245 cd05073 PTKc_Hck Catalytic dom 100.0 4.6E-38 9.9E-43 305.0 24.3 253 4-276 3-259 (260)
246 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.5E-38 3.3E-43 312.6 21.2 249 6-273 4-266 (284)
247 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.6E-38 3.5E-43 311.1 21.3 260 6-277 3-283 (284)
248 cd05058 PTKc_Met_Ron Catalytic 100.0 4.4E-38 9.5E-43 304.9 24.1 252 13-279 1-261 (262)
249 KOG0690 Serine/threonine prote 100.0 8.9E-40 1.9E-44 309.8 11.6 265 5-297 166-438 (516)
250 cd05047 PTKc_Tie Catalytic dom 100.0 2.9E-38 6.4E-43 308.2 22.7 247 13-278 1-269 (270)
251 cd05574 STKc_phototropin_like 100.0 6.8E-38 1.5E-42 312.7 25.7 249 7-266 1-278 (316)
252 cd08220 STKc_Nek8 Catalytic do 100.0 8.8E-38 1.9E-42 301.2 25.4 246 8-272 1-252 (256)
253 KOG0577 Serine/threonine prote 100.0 4.5E-40 9.9E-45 331.6 9.6 241 9-271 28-276 (948)
254 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.5E-38 1.4E-42 303.8 24.4 254 7-272 1-263 (267)
255 cd05085 PTKc_Fer Catalytic dom 100.0 6.4E-38 1.4E-42 301.6 24.2 244 13-275 1-249 (250)
256 cd05041 PTKc_Fes_like Catalyti 100.0 4.7E-38 1E-42 302.7 23.2 245 13-275 1-250 (251)
257 KOG0983 Mitogen-activated prot 100.0 2.2E-39 4.8E-44 301.0 13.3 249 7-271 92-347 (391)
258 cd05580 STKc_PKA Catalytic dom 100.0 8.9E-38 1.9E-42 308.2 25.6 235 7-265 1-241 (290)
259 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-37 2.9E-42 305.0 26.7 253 8-272 1-280 (284)
260 cd06616 PKc_MKK4 Catalytic dom 100.0 2.3E-38 4.9E-43 311.6 21.1 252 7-272 4-266 (288)
261 cd06640 STKc_MST4 Catalytic do 100.0 3.2E-38 7E-43 309.1 21.9 246 6-272 3-252 (277)
262 cd07860 STKc_CDK2_3 Catalytic 100.0 8.4E-38 1.8E-42 306.7 24.8 253 8-272 1-280 (284)
263 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-37 2.4E-42 306.0 25.5 255 7-272 1-284 (288)
264 cd07850 STKc_JNK Catalytic dom 100.0 5.2E-38 1.1E-42 319.0 23.9 249 4-271 13-309 (353)
265 PLN00009 cyclin-dependent kina 100.0 1.8E-37 3.9E-42 306.3 27.0 255 7-272 2-283 (294)
266 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-37 2.3E-42 301.1 24.9 249 7-274 4-255 (256)
267 cd06631 STKc_YSK4 Catalytic do 100.0 7.2E-38 1.6E-42 304.1 23.7 252 8-272 1-261 (265)
268 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-37 3.8E-42 308.9 26.9 259 8-272 1-312 (316)
269 cd05040 PTKc_Ack_like Catalyti 100.0 6.6E-38 1.4E-42 302.7 22.9 247 13-275 1-256 (257)
270 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.7E-38 1.7E-42 307.1 23.7 253 7-272 1-282 (286)
271 cd06656 STKc_PAK3 Catalytic do 100.0 9E-38 1.9E-42 309.6 24.3 248 6-272 18-268 (297)
272 cd06608 STKc_myosinIII_like Ca 100.0 8.8E-38 1.9E-42 303.9 23.7 253 4-272 3-271 (275)
273 cd07866 STKc_BUR1 Catalytic do 100.0 1E-37 2.2E-42 309.7 24.5 263 4-271 5-306 (311)
274 cd05633 STKc_GRK3 Catalytic do 100.0 1.2E-37 2.5E-42 306.1 24.6 239 14-270 1-252 (279)
275 cd07865 STKc_CDK9 Catalytic do 100.0 1.1E-37 2.3E-42 309.4 24.5 259 5-271 10-305 (310)
276 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.6E-38 1.2E-42 303.1 21.9 239 13-274 1-258 (259)
277 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.3E-38 2E-42 304.4 23.6 250 13-275 1-268 (269)
278 cd07843 STKc_CDC2L1 Catalytic 100.0 8E-38 1.7E-42 308.7 23.2 256 5-272 3-289 (293)
279 PHA03210 serine/threonine kina 100.0 4.1E-38 9E-43 334.1 22.4 256 5-271 146-452 (501)
280 cd06652 STKc_MEKK2 Catalytic d 100.0 1.6E-37 3.4E-42 301.9 24.5 249 7-272 2-260 (265)
281 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-37 2.6E-42 304.2 23.7 252 7-275 5-274 (275)
282 cd08218 STKc_Nek1 Catalytic do 100.0 2.1E-37 4.5E-42 299.1 25.0 246 8-272 1-252 (256)
283 cd06639 STKc_myosinIIIB Cataly 100.0 2.9E-37 6.2E-42 304.4 26.5 252 5-272 20-286 (291)
284 cd05042 PTKc_Aatyk Catalytic d 100.0 1.2E-37 2.7E-42 303.3 23.6 249 13-275 1-268 (269)
285 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-37 3.1E-42 302.6 23.8 248 7-271 2-259 (266)
286 cd06623 PKc_MAPKK_plant_like C 100.0 2.2E-37 4.7E-42 299.6 24.9 249 7-272 1-255 (264)
287 cd06605 PKc_MAPKK Catalytic do 100.0 6.7E-38 1.5E-42 303.8 21.4 247 7-271 1-255 (265)
288 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.8E-37 3.9E-42 302.5 24.3 251 8-272 2-268 (272)
289 cd07855 STKc_ERK5 Catalytic do 100.0 9.3E-38 2E-42 314.7 22.9 258 5-271 3-292 (334)
290 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-38 4.8E-43 307.1 17.6 240 13-274 1-257 (258)
291 cd05044 PTKc_c-ros Catalytic d 100.0 5.8E-38 1.3E-42 305.2 20.5 249 13-275 1-268 (269)
292 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.9E-38 8.4E-43 308.4 19.2 245 7-272 4-252 (277)
293 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-37 3.2E-42 313.7 23.8 255 5-272 3-290 (337)
294 smart00219 TyrKc Tyrosine kina 100.0 1.9E-37 4.2E-42 298.7 23.6 248 9-274 1-258 (258)
295 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-37 3.4E-42 303.7 23.1 247 7-272 1-254 (277)
296 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-37 5.3E-42 303.3 24.2 252 9-272 1-279 (283)
297 cd06607 STKc_TAO Catalytic dom 100.0 3.1E-37 6.7E-42 307.0 25.3 245 6-272 14-266 (307)
298 cd08217 STKc_Nek2 Catalytic do 100.0 2.8E-37 6.1E-42 298.4 24.2 246 8-272 1-261 (265)
299 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-37 4.1E-42 299.0 23.0 245 8-272 1-254 (258)
300 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-37 2.8E-42 302.8 21.8 240 13-274 1-261 (262)
301 cd07852 STKc_MAPK15 Catalytic 100.0 1.6E-37 3.5E-42 313.2 23.1 263 1-272 1-294 (337)
302 KOG0986 G protein-coupled rece 100.0 6.8E-39 1.5E-43 315.3 12.6 249 2-267 180-435 (591)
303 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-37 2.7E-42 305.0 21.6 239 14-274 2-273 (274)
304 PTZ00024 cyclin-dependent prot 100.0 2.6E-37 5.6E-42 311.3 24.2 265 1-271 2-311 (335)
305 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-37 3.9E-42 306.9 22.6 269 5-291 13-289 (296)
306 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.8E-37 1.5E-41 301.4 26.5 252 7-272 1-265 (287)
307 cd07838 STKc_CDK4_6_like Catal 100.0 7E-37 1.5E-41 299.9 26.4 249 9-271 1-282 (287)
308 KOG4257 Focal adhesion tyrosin 100.0 9.3E-38 2E-42 316.6 20.6 255 10-283 392-655 (974)
309 cd08225 STKc_Nek5 Catalytic do 100.0 3.2E-37 7E-42 297.4 23.6 247 8-272 1-253 (257)
310 cd07864 STKc_CDK12 Catalytic d 100.0 2E-37 4.3E-42 306.8 22.7 258 4-272 4-298 (302)
311 KOG0612 Rho-associated, coiled 100.0 1.8E-39 3.9E-44 347.9 8.6 266 6-295 74-350 (1317)
312 cd06624 STKc_ASK Catalytic dom 100.0 3.7E-37 8E-42 299.8 24.2 248 9-272 10-264 (268)
313 cd05611 STKc_Rim15_like Cataly 100.0 1.8E-37 4E-42 300.4 21.6 247 13-279 2-254 (260)
314 cd06641 STKc_MST3 Catalytic do 100.0 4.5E-37 9.7E-42 301.0 24.6 245 7-272 4-252 (277)
315 cd05606 STKc_beta_ARK Catalyti 100.0 4.8E-37 1E-41 301.4 24.8 240 14-271 1-253 (278)
316 cd05578 STKc_Yank1 Catalytic d 100.0 1.1E-37 2.3E-42 301.6 19.8 242 8-268 1-248 (258)
317 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.6E-37 7.8E-42 311.6 24.0 257 5-271 3-298 (342)
318 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-37 2.8E-42 307.8 20.1 247 7-272 22-271 (292)
319 PHA03390 pk1 serine/threonine- 100.0 6.4E-37 1.4E-41 298.9 24.6 242 6-271 13-260 (267)
320 cd06635 STKc_TAO1 Catalytic do 100.0 7.4E-37 1.6E-41 305.9 25.4 244 7-272 25-276 (317)
321 cd05118 STKc_CMGC Catalytic do 100.0 3.7E-37 7.9E-42 301.3 22.2 249 9-272 1-279 (283)
322 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-36 2.7E-41 306.2 26.4 256 8-271 1-290 (332)
323 cd06659 STKc_PAK6 Catalytic do 100.0 3.2E-37 7E-42 305.8 21.7 247 7-272 21-270 (297)
324 KOG0607 MAP kinase-interacting 100.0 5.5E-38 1.2E-42 297.1 15.2 260 9-271 79-359 (463)
325 cd07840 STKc_CDK9_like Catalyt 100.0 1.1E-36 2.3E-41 298.4 24.8 253 9-272 1-283 (287)
326 cd05122 PKc_STE Catalytic doma 100.0 9.4E-37 2E-41 291.8 23.9 247 8-272 1-250 (253)
327 KOG0604 MAP kinase-activated p 100.0 2E-38 4.4E-43 298.0 11.8 254 4-270 58-319 (400)
328 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-36 3.1E-41 305.6 26.1 250 5-271 8-286 (328)
329 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.9E-37 1.3E-41 298.8 22.6 252 9-277 1-272 (273)
330 cd06653 STKc_MEKK3_like_1 Cata 100.0 9E-37 1.9E-41 296.6 23.6 248 7-271 2-259 (264)
331 cd07879 STKc_p38delta_MAPK13 C 100.0 8.2E-37 1.8E-41 309.0 24.2 247 4-271 12-295 (342)
332 cd08528 STKc_Nek10 Catalytic d 100.0 6.1E-37 1.3E-41 298.2 22.5 250 8-275 1-268 (269)
333 cd07834 STKc_MAPK Catalytic do 100.0 5.9E-37 1.3E-41 307.8 23.0 251 8-271 1-287 (330)
334 cd06633 STKc_TAO3 Catalytic do 100.0 1.7E-36 3.6E-41 302.9 26.1 244 6-271 20-271 (313)
335 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-36 2.5E-41 308.1 25.0 250 5-271 13-296 (343)
336 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-39 4.1E-44 351.7 4.7 259 5-281 1233-1499(1509)
337 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-36 2.4E-41 292.8 23.4 246 8-272 1-254 (258)
338 cd06626 STKc_MEKK4 Catalytic d 100.0 2.2E-36 4.8E-41 292.8 25.6 251 8-271 1-259 (264)
339 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-36 2.9E-41 298.9 24.2 250 5-271 17-268 (286)
340 cd06647 STKc_PAK_I Catalytic d 100.0 7.2E-37 1.6E-41 302.6 22.4 247 6-271 18-267 (293)
341 KOG0579 Ste20-like serine/thre 100.0 1.1E-38 2.4E-43 323.3 9.3 248 7-271 32-287 (1187)
342 KOG0586 Serine/threonine prote 100.0 1.9E-37 4.1E-42 316.4 17.8 247 3-271 52-304 (596)
343 cd05577 STKc_GRK Catalytic dom 100.0 1.9E-36 4E-41 296.7 24.2 238 15-269 1-245 (277)
344 cd07877 STKc_p38alpha_MAPK14 C 100.0 2E-36 4.3E-41 306.6 25.2 250 5-271 15-298 (345)
345 KOG4250 TANK binding protein k 100.0 8.6E-38 1.9E-42 322.9 15.3 271 3-283 9-316 (732)
346 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-36 2.5E-41 299.7 22.7 256 8-279 1-269 (288)
347 cd06634 STKc_TAO2 Catalytic do 100.0 1.3E-36 2.7E-41 303.0 22.9 245 6-272 14-266 (308)
348 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-36 5E-41 297.6 24.4 245 8-271 20-267 (285)
349 cd06606 STKc_MAPKKK Catalytic 100.0 3.6E-36 7.8E-41 288.9 25.0 249 8-272 1-256 (260)
350 cd07851 STKc_p38 Catalytic dom 100.0 9.3E-37 2E-41 308.7 21.7 247 5-271 13-296 (343)
351 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.1E-36 6.8E-41 293.8 24.3 249 13-275 1-267 (268)
352 cd05572 STKc_cGK_PKG Catalytic 100.0 2E-36 4.3E-41 293.5 22.7 234 15-266 1-240 (262)
353 cd06627 STKc_Cdc7_like Catalyt 100.0 4.4E-36 9.6E-41 288.5 24.6 245 8-272 1-250 (254)
354 cd07829 STKc_CDK_like Catalyti 100.0 2.2E-36 4.9E-41 295.6 22.7 252 9-272 1-278 (282)
355 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-36 6E-41 303.2 23.6 251 13-271 4-306 (328)
356 cd08530 STKc_CNK2-like Catalyt 100.0 4.1E-36 8.8E-41 289.3 23.8 244 8-272 1-252 (256)
357 KOG0584 Serine/threonine prote 100.0 1.3E-37 2.7E-42 318.0 13.9 248 9-280 42-300 (632)
358 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-36 2.9E-41 296.7 20.4 248 7-267 1-267 (280)
359 cd07830 STKc_MAK_like Catalyti 100.0 3.7E-36 8.1E-41 294.7 23.2 252 9-272 1-279 (283)
360 KOG0671 LAMMER dual specificit 100.0 9.6E-38 2.1E-42 302.4 11.4 257 4-270 86-403 (415)
361 KOG0199 ACK and related non-re 100.0 1.6E-37 3.5E-42 318.3 13.6 249 7-272 110-367 (1039)
362 KOG4236 Serine/threonine prote 100.0 8.5E-38 1.8E-42 311.6 11.0 242 12-269 569-815 (888)
363 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-35 2.4E-40 293.0 25.4 243 8-266 1-256 (290)
364 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-35 3.4E-40 324.0 27.7 145 6-156 3-153 (669)
365 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-36 6.2E-41 291.4 19.4 252 15-278 1-259 (265)
366 KOG1094 Discoidin domain recep 100.0 7.2E-37 1.6E-41 308.5 15.2 260 7-277 538-804 (807)
367 cd08222 STKc_Nek11 Catalytic d 100.0 2.4E-36 5.2E-41 292.6 18.3 245 8-272 1-256 (260)
368 cd06657 STKc_PAK4 Catalytic do 100.0 1.3E-35 2.8E-40 293.6 23.5 244 10-272 23-269 (292)
369 KOG1151 Tousled-like protein k 100.0 8.1E-38 1.8E-42 306.4 7.2 262 3-270 459-738 (775)
370 KOG0614 cGMP-dependent protein 100.0 8.3E-38 1.8E-42 310.9 7.1 269 6-301 419-695 (732)
371 KOG0696 Serine/threonine prote 100.0 4.1E-37 8.9E-42 299.3 11.4 274 5-303 347-626 (683)
372 KOG1006 Mitogen-activated prot 100.0 5.8E-38 1.3E-42 290.6 3.7 251 8-272 65-326 (361)
373 cd08216 PK_STRAD Pseudokinase 100.0 1.6E-35 3.6E-40 295.0 21.2 255 9-272 4-294 (314)
374 KOG0666 Cyclin C-dependent kin 100.0 3.5E-36 7.5E-41 284.1 13.4 265 6-279 23-340 (438)
375 KOG0196 Tyrosine kinase, EPH ( 100.0 1.9E-36 4.2E-41 314.1 12.4 257 7-279 629-893 (996)
376 KOG0662 Cyclin-dependent kinas 100.0 9.8E-36 2.1E-40 261.5 14.8 252 7-270 2-280 (292)
377 KOG0603 Ribosomal protein S6 k 100.0 9E-36 2E-40 305.6 16.7 241 5-271 320-561 (612)
378 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-34 2.6E-39 278.3 21.4 234 15-269 1-240 (250)
379 PLN03225 Serine/threonine-prot 100.0 1.2E-34 2.5E-39 310.4 21.2 249 6-271 131-448 (566)
380 KOG0587 Traf2- and Nck-interac 100.0 1.7E-34 3.8E-39 303.5 21.4 251 5-271 17-280 (953)
381 KOG1035 eIF-2alpha kinase GCN2 100.0 2.1E-35 4.7E-40 319.0 14.9 256 5-271 477-869 (1351)
382 KOG0695 Serine/threonine prote 100.0 1.5E-35 3.3E-40 281.9 11.2 273 6-299 249-532 (593)
383 cd05576 STKc_RPK118_like Catal 100.0 1.6E-34 3.6E-39 276.8 18.4 220 18-268 4-224 (237)
384 KOG3653 Transforming growth fa 100.0 1.8E-34 3.8E-39 286.0 16.0 259 7-278 210-504 (534)
385 KOG2052 Activin A type IB rece 100.0 5.2E-34 1.1E-38 280.8 19.1 265 4-279 208-505 (513)
386 KOG0669 Cyclin T-dependent kin 100.0 5.6E-36 1.2E-40 275.4 3.8 259 5-271 15-313 (376)
387 KOG0200 Fibroblast/platelet-de 100.0 2E-33 4.3E-38 303.6 23.7 257 8-280 297-582 (609)
388 KOG0608 Warts/lats-like serine 100.0 4.1E-34 8.9E-39 290.5 15.4 274 7-298 629-943 (1034)
389 PLN00113 leucine-rich repeat r 100.0 3E-33 6.5E-38 319.5 23.6 249 8-279 691-953 (968)
390 KOG1290 Serine/threonine prote 100.0 8E-33 1.7E-37 274.8 23.4 136 3-138 74-222 (590)
391 KOG0670 U4/U6-associated splic 100.0 2.2E-34 4.7E-39 287.2 11.4 206 4-220 429-641 (752)
392 KOG1025 Epidermal growth facto 100.0 1.1E-33 2.4E-38 294.6 14.3 255 9-281 698-961 (1177)
393 smart00220 S_TKc Serine/Threon 100.0 5.4E-32 1.2E-36 256.8 21.4 236 19-272 1-240 (244)
394 KOG1027 Serine/threonine prote 100.0 1.8E-33 3.8E-38 294.7 9.4 246 11-271 513-765 (903)
395 KOG0984 Mitogen-activated prot 100.0 8.9E-33 1.9E-37 247.8 11.0 212 8-233 47-269 (282)
396 KOG0668 Casein kinase II, alph 100.0 1.7E-32 3.8E-37 249.3 10.0 250 6-271 37-320 (338)
397 PLN03224 probable serine/threo 100.0 1.3E-30 2.8E-35 273.5 23.9 254 6-271 144-498 (507)
398 KOG1152 Signal transduction se 100.0 4E-32 8.6E-37 274.2 11.5 197 7-216 561-771 (772)
399 KOG1345 Serine/threonine kinas 100.0 4.3E-32 9.3E-37 252.3 10.8 264 5-283 22-294 (378)
400 KOG0664 Nemo-like MAPK-related 100.0 2.7E-33 5.9E-38 260.3 1.7 256 3-270 49-340 (449)
401 KOG1024 Receptor-like protein 100.0 4.2E-31 9.2E-36 256.2 14.4 258 7-281 284-559 (563)
402 cd00180 PKc Catalytic domain o 100.0 1.5E-29 3.2E-34 233.7 22.2 208 15-273 1-214 (215)
403 KOG1167 Serine/threonine prote 100.0 6.2E-31 1.4E-35 258.2 10.7 262 3-271 32-379 (418)
404 KOG0665 Jun-N-terminal kinase 100.0 4.5E-30 9.8E-35 244.0 11.2 255 5-279 15-313 (369)
405 KOG0576 Mitogen-activated prot 100.0 1.2E-30 2.6E-35 267.3 4.6 264 6-285 14-294 (829)
406 smart00221 STYKc Protein kinas 100.0 7.1E-28 1.5E-32 226.6 21.0 197 9-216 1-202 (225)
407 smart00750 KIND kinase non-cat 100.0 9.3E-28 2E-32 219.0 16.4 167 88-279 1-171 (176)
408 PLN00181 protein SPA1-RELATED; 99.9 3.3E-28 7.2E-33 272.0 11.9 188 76-272 52-264 (793)
409 COG0515 SPS1 Serine/threonine 99.9 6E-24 1.3E-28 207.9 25.4 257 9-273 2-275 (384)
410 PRK09188 serine/threonine prot 99.9 2.6E-25 5.6E-30 224.4 15.2 180 3-198 14-210 (365)
411 KOG0590 Checkpoint kinase and 99.9 3.6E-24 7.9E-29 229.4 6.6 253 10-271 321-583 (601)
412 cd05147 RIO1_euk RIO kinase fa 99.9 7.4E-23 1.6E-27 189.8 12.9 138 11-158 1-168 (190)
413 PF14531 Kinase-like: Kinase-l 99.9 1.7E-22 3.7E-27 196.1 15.4 232 8-264 13-288 (288)
414 PRK10359 lipopolysaccharide co 99.9 5.9E-23 1.3E-27 193.7 11.5 171 2-208 26-216 (232)
415 KOG1166 Mitotic checkpoint ser 99.9 1E-21 2.2E-26 215.1 18.1 256 5-281 696-957 (974)
416 cd05145 RIO1_like RIO kinase f 99.9 1.1E-21 2.4E-26 182.0 15.1 138 11-159 1-169 (190)
417 PRK12274 serine/threonine prot 99.9 1.4E-21 3E-26 181.0 13.2 193 9-219 4-212 (218)
418 KOG0606 Microtubule-associated 99.9 3.6E-22 7.9E-27 214.8 8.0 218 6-268 82-307 (1205)
419 KOG1240 Protein kinase contain 99.9 4.2E-22 9.1E-27 214.4 6.8 251 8-273 24-291 (1431)
420 KOG0603 Ribosomal protein S6 k 99.8 3E-22 6.5E-27 206.3 3.9 250 14-300 1-260 (612)
421 KOG4158 BRPK/PTEN-induced prot 99.8 7.7E-21 1.7E-25 185.6 13.4 192 76-278 315-515 (598)
422 smart00090 RIO RIO-like kinase 99.8 4.5E-20 9.7E-25 177.0 12.5 142 8-158 29-199 (237)
423 PRK10345 hypothetical protein; 99.8 2.9E-19 6.3E-24 167.7 16.3 137 12-155 7-157 (210)
424 KOG0195 Integrin-linked kinase 99.8 2.1E-20 4.6E-25 174.5 6.1 243 8-277 191-446 (448)
425 PRK14879 serine/threonine prot 99.8 2.8E-18 6.2E-23 161.2 16.0 132 12-156 1-143 (211)
426 TIGR03724 arch_bud32 Kae1-asso 99.8 3.5E-18 7.7E-23 159.2 14.4 127 14-156 1-138 (199)
427 KOG1023 Natriuretic peptide re 99.8 1.6E-18 3.4E-23 178.7 12.3 209 63-280 6-227 (484)
428 cd05144 RIO2_C RIO kinase fami 99.8 3.4E-18 7.4E-23 159.5 13.0 137 8-159 16-177 (198)
429 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.6E-19 5.6E-24 181.5 3.2 174 77-267 329-506 (516)
430 PRK09605 bifunctional UGMP fam 99.7 1.7E-17 3.6E-22 177.8 15.1 133 7-156 333-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 6E-17 1.3E-21 149.3 12.6 137 11-159 1-166 (187)
432 PRK01723 3-deoxy-D-manno-octul 99.7 1.5E-15 3.2E-20 145.9 15.8 133 13-156 37-191 (239)
433 cd05120 APH_ChoK_like Aminogly 99.7 9.5E-16 2.1E-20 134.5 12.9 133 11-156 2-138 (155)
434 KOG0590 Checkpoint kinase and 99.6 4.2E-17 9.2E-22 175.1 -3.1 253 6-270 19-283 (601)
435 TIGR01982 UbiB 2-polyprenylphe 99.5 2.2E-13 4.7E-18 142.0 19.3 140 13-159 123-309 (437)
436 KOG0601 Cyclin-dependent kinas 99.5 4.9E-15 1.1E-19 153.2 6.4 254 5-272 112-378 (524)
437 cd05146 RIO3_euk RIO kinase fa 99.5 3.6E-13 7.8E-18 124.6 13.0 137 12-158 2-175 (197)
438 PRK04750 ubiB putative ubiquin 99.5 3E-12 6.5E-17 135.4 19.5 145 7-159 120-316 (537)
439 cd05151 ChoK Choline Kinase (C 99.5 6.1E-13 1.3E-17 120.3 11.9 126 12-155 3-135 (170)
440 KOG3087 Serine/threonine prote 99.3 1.3E-11 2.7E-16 110.6 12.1 142 11-156 11-165 (229)
441 COG3642 Mn2+-dependent serine/ 99.3 1.3E-11 2.8E-16 111.0 10.8 128 13-156 2-140 (204)
442 KOG0606 Microtubule-associated 99.3 2.8E-12 6.1E-17 139.4 3.8 271 6-297 803-1106(1205)
443 cd05154 ACAD10_11_like Acyl-Co 99.2 1E-10 2.3E-15 110.0 11.9 139 13-155 4-205 (223)
444 KOG0601 Cyclin-dependent kinas 99.2 1.3E-11 2.8E-16 128.0 5.6 241 6-272 264-513 (524)
445 PRK15123 lipopolysaccharide co 99.2 1.4E-09 3.1E-14 106.0 17.6 135 19-155 34-193 (268)
446 KOG1243 Protein kinase [Genera 99.1 5.2E-10 1.1E-14 117.3 14.2 183 9-212 15-201 (690)
447 KOG1266 Protein kinase [Signal 99.1 8.4E-11 1.8E-15 113.5 7.2 203 52-271 115-329 (458)
448 COG4248 Uncharacterized protei 99.1 1.5E-09 3.3E-14 108.1 14.4 256 9-280 13-303 (637)
449 PF01163 RIO1: RIO1 family; I 99.1 5.3E-10 1.1E-14 103.0 8.7 125 22-158 1-157 (188)
450 PF06293 Kdo: Lipopolysacchari 98.9 3.1E-08 6.7E-13 93.0 14.5 111 46-157 55-171 (206)
451 KOG2137 Protein kinase [Signal 98.9 1.3E-09 2.8E-14 114.9 5.4 154 110-270 105-262 (700)
452 PRK09902 hypothetical protein; 98.7 4.1E-07 8.8E-12 84.8 15.4 138 16-156 27-179 (216)
453 KOG3741 Poly(A) ribonuclease s 98.7 9.7E-07 2.1E-11 90.6 18.7 210 20-273 289-521 (655)
454 PF06176 WaaY: Lipopolysacchar 98.7 1.5E-07 3.2E-12 88.1 11.6 138 3-155 27-182 (229)
455 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 6.3E-07 1.4E-11 85.4 14.5 72 13-88 7-78 (226)
456 COG2112 Predicted Ser/Thr prot 98.6 2.2E-07 4.7E-12 83.4 10.3 128 10-156 25-155 (201)
457 COG0478 RIO-like serine/threon 98.6 2.7E-07 5.8E-12 88.1 11.0 134 9-156 93-251 (304)
458 COG0661 AarF Predicted unusual 98.6 2.5E-07 5.4E-12 97.7 10.8 141 13-159 131-317 (517)
459 COG1718 RIO1 Serine/threonine 98.6 5.6E-07 1.2E-11 85.2 12.0 134 14-158 55-217 (268)
460 PF01636 APH: Phosphotransfera 98.5 1.5E-06 3.2E-11 82.1 13.2 140 12-155 2-196 (239)
461 cd05150 APH Aminoglycoside 3'- 98.4 3.7E-06 8E-11 80.8 13.7 75 15-93 6-82 (244)
462 PF10707 YrbL-PhoP_reg: PhoP r 98.3 2E-05 4.4E-10 73.3 15.0 130 12-150 6-165 (199)
463 KOG1235 Predicted unusual prot 98.2 5.1E-06 1.1E-10 87.7 10.3 143 13-160 167-358 (538)
464 cd05155 APH_ChoK_like_1 Unchar 98.1 1.3E-05 2.9E-10 76.7 10.2 74 12-90 2-81 (235)
465 KOG0576 Mitogen-activated prot 98.1 5.7E-07 1.2E-11 94.4 -1.1 185 9-215 244-431 (829)
466 PLN02876 acyl-CoA dehydrogenas 98.0 5.6E-05 1.2E-09 85.4 14.4 78 11-88 42-128 (822)
467 PF13095 FTA2: Kinetochore Sim 98.0 9.3E-05 2E-09 68.6 12.7 126 6-154 36-206 (207)
468 TIGR01767 MTRK 5-methylthiorib 98.0 0.00073 1.6E-08 68.3 19.4 71 14-86 2-82 (370)
469 PRK09550 mtnK methylthioribose 97.9 0.00099 2.1E-08 68.6 19.5 74 12-87 31-114 (401)
470 PRK10593 hypothetical protein; 97.9 0.00023 5.1E-09 70.7 14.2 80 8-89 15-99 (297)
471 PRK05231 homoserine kinase; Pr 97.8 0.00048 1E-08 69.0 14.9 72 12-86 27-104 (319)
472 cd05157 ETNK_euk Ethanolamine 97.8 0.00044 9.5E-09 65.9 13.3 74 12-90 3-79 (235)
473 TIGR00938 thrB_alt homoserine 97.7 0.00035 7.6E-09 69.7 12.0 141 10-155 25-216 (307)
474 cd05153 HomoserineK_II Homoser 97.6 0.00061 1.3E-08 67.3 12.2 138 12-155 19-204 (296)
475 KOG2268 Serine/threonine prote 97.5 8.4E-05 1.8E-09 73.0 4.1 132 9-155 94-250 (465)
476 KOG2270 Serine/threonine prote 97.5 0.00067 1.5E-08 67.8 10.4 138 11-157 148-314 (520)
477 PRK12396 5-methylribose kinase 97.5 0.0082 1.8E-07 61.5 18.2 73 12-86 34-115 (409)
478 PF12260 PIP49_C: Protein-kina 97.5 0.00041 8.8E-09 64.1 8.1 98 50-157 7-112 (188)
479 cd05156 ChoK_euk Choline Kinas 97.5 0.0011 2.4E-08 65.8 11.7 74 12-90 3-84 (302)
480 KOG1035 eIF-2alpha kinase GCN2 97.4 0.0011 2.4E-08 74.7 12.1 202 51-281 229-439 (1351)
481 TIGR02721 ycfN_thiK thiamine k 97.4 0.0034 7.3E-08 60.8 13.6 131 14-155 3-174 (256)
482 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0031 6.7E-08 62.0 9.9 46 16-62 20-65 (276)
483 KOG1826 Ras GTPase activating 97.0 0.00014 3E-09 83.4 -0.9 130 75-214 1302-1440(2724)
484 KOG1093 Predicted protein kina 97.0 0.0032 7E-08 65.5 8.8 162 45-270 25-191 (725)
485 PLN02236 choline kinase 96.9 0.019 4.2E-07 58.2 14.1 137 12-155 41-230 (344)
486 PLN02756 S-methyl-5-thioribose 96.8 0.023 4.9E-07 58.6 13.8 74 11-88 36-119 (418)
487 TIGR02906 spore_CotS spore coa 96.8 0.033 7.2E-07 55.3 14.6 61 22-86 11-77 (313)
488 PLN02421 phosphotransferase, a 96.7 0.025 5.4E-07 57.1 12.7 73 8-86 16-92 (330)
489 COG5072 ALK1 Serine/threonine 96.5 0.0092 2E-07 59.9 7.9 74 74-156 296-370 (488)
490 COG3173 Predicted aminoglycosi 96.4 0.02 4.4E-07 57.1 10.0 143 9-157 27-229 (321)
491 PRK11768 serine/threonine prot 96.3 0.12 2.6E-06 52.0 15.0 68 18-86 36-109 (325)
492 PF03881 Fructosamin_kin: Fruc 96.1 0.036 7.7E-07 54.8 9.9 75 9-86 19-94 (288)
493 KOG1236 Predicted unusual prot 96.1 0.022 4.7E-07 58.1 8.3 60 78-139 319-380 (565)
494 PRK06148 hypothetical protein; 95.9 0.14 3E-06 59.4 14.7 78 13-92 31-122 (1013)
495 TIGR02904 spore_ysxE spore coa 95.7 0.15 3.4E-06 50.7 12.7 29 124-155 197-225 (309)
496 COG2334 Putative homoserine ki 95.5 0.1 2.2E-06 52.6 10.2 135 15-155 34-227 (331)
497 PTZ00384 choline kinase; Provi 95.0 0.58 1.3E-05 48.2 14.3 75 11-90 54-136 (383)
498 PRK06149 hypothetical protein; 94.7 0.52 1.1E-05 54.6 14.3 71 13-86 37-119 (972)
499 PTZ00296 choline kinase; Provi 93.9 0.95 2.1E-05 47.6 13.0 71 11-86 109-188 (442)
500 COG0510 ycfN Thiamine kinase a 93.7 0.82 1.8E-05 44.7 11.4 44 109-155 137-182 (269)
No 1
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-60 Score=432.90 Aligned_cols=294 Identities=71% Similarity=1.246 Sum_probs=287.7
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.+++++|+++++||+|+||.+|+|....+|+.||||+++....++++.+|.++++.|++. ..||.+.+|+.+..++++|
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g-~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGG-VGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccC-CCCchhhhhccccccceee
Confidence 468899999999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||++|++|+++++.|.+.|+.+++++++.||+..|+|+|.+++|||||||+|+|++.+.....+.|+|||+|+.+.+..+
T Consensus 90 MdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 90 MDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred eeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999888889999999999999999999
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
..|+||++....+||.+|++-..+.|.++++++|+.|+|++|+++..|.+||++.++.++.|++++|.+++..++++.+|
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC 249 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLC 249 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 297 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 297 (475)
+++|.||.-++.+|..+.+++.|++..|.++|+-+|...+.+.|+.|||+.++.+
T Consensus 250 ~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkqk 304 (341)
T KOG1163|consen 250 KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQK 304 (341)
T ss_pred CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988754
No 2
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-58 Score=437.78 Aligned_cols=291 Identities=61% Similarity=1.044 Sum_probs=282.9
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|+-.|+++++||+|+||++|+|++..+++.||||++..+...+++..|.+.+++|.+. ++||.++.|+.++.++.|||
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~-~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGT-EGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCC-CCCCceeeeccccchhhhhh
Confidence 57889999999999999999999999999999999999999999999999999999976 99999999999999999999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC--CCCCcEEEeecCCcccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG--RRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~--~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|++|+||+|+++.|+++|+.+++++|+.||+..++|+|++.+|.|||||+|+||+.. .+.+.|.|+|||+|+.+.++.
T Consensus 104 dLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 104 DLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred hhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 999999999999999999999999999999999999999999999999999999863 345679999999999999999
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
+.+|+||++.+.+.||.+||+.+.++|.++++++|+.|||-|++++|.|.+||+|+++.+.+++|++|.+++..++++.+
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVL 263 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 295 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 295 (475)
|.++|.+|..++.+...+++++-|+|+.+..+|.++|.+.|...|+.|||..+.
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 999999999999999999999999999999999999999999999999999865
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-49 Score=384.26 Aligned_cols=253 Identities=22% Similarity=0.333 Sum_probs=219.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC-EEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD-YNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~-~~~lv 82 (475)
.+.+.++.||+|..|+||++.++.|++.+|+|++..... ..++.+|.++++.+++ ++|+.+++.+..+. ...|+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~s--pyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQS--PYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCC--CCeeeEeEEEEeCCceEEee
Confidence 367888999999999999999999999999999854433 3578999999998855 99999999999888 59999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||| ||||++++... +++++..+..|+.+|++||.|||+ ++||||||||+|||| +..|.|||||||.++.+.+.
T Consensus 157 mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh
Confidence 9999 99999999854 679999999999999999999995 999999999999999 68999999999999988775
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCC--CCCCHHHHHHHHhhccccccH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL--KAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~--~~~~~~~~~~~i~~~~~~~~~ 238 (475)
. .++++||..|||||.+.|..|+.++||||||++|+||++|++||... ......+.+..|.....+.
T Consensus 233 ~---------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~-- 301 (364)
T KOG0581|consen 233 I---------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPR-- 301 (364)
T ss_pred h---------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCC--
Confidence 2 36789999999999999999999999999999999999999999763 2345566666666544332
Q ss_pred HHHhcC-ChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 239 EALCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 239 ~~l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
++.+ ++++|++|+..||.+||.+||++.+| +++-|.+.
T Consensus 302 --lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qL---l~Hpfi~~ 340 (364)
T KOG0581|consen 302 --LPEGEFSPEFRSFVSCCLRKDPSERPSAKQL---LQHPFIKK 340 (364)
T ss_pred --CCcccCCHHHHHHHHHHhcCCcccCCCHHHH---hcCHHHhh
Confidence 3444 89999999999999999999998877 56666553
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-50 Score=388.96 Aligned_cols=259 Identities=24% Similarity=0.337 Sum_probs=218.4
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC---------CchHHHHHHHHHHHHhCCCCCcCeeEEeeE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---------KHPQLQYEAKLYKILQGGSTGIPNLRWFGV 74 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~---------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~ 74 (475)
.+.+.|.+.+.||+|+||.|-+|..+.||+.||||+++... ......+|+++|+.|+| |+|++++.+++
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H--P~IV~~~d~f~ 246 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH--PNIVRIKDFFE 246 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC--CCEEEEeeeee
Confidence 35678999999999999999999999999999999987542 22346799999999988 99999999999
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
..++.||||||+ ||.|.+.+- .++.+.+....-++.||+.||.|||++||+||||||+|||+..+.++..+||+|||+
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv-~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVV-ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred cCCceEEEEEEecCccHHHHHH-hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999 999999886 355789999999999999999999999999999999999998766778999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCC---CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 230 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~---~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~ 230 (475)
|+...... ...++|||+.|.|||++.+.. +..++|||||||+||-+++|.+||.+.... ....+.|.
T Consensus 326 AK~~g~~s--------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~eQI~ 395 (475)
T KOG0615|consen 326 AKVSGEGS--------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKEQIL 395 (475)
T ss_pred hhccccce--------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHHHHh
Confidence 99775322 246789999999999998765 345889999999999999999999875332 22445565
Q ss_pred hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 231 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 231 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
..++.. .+..+..++++..+||.+||..||++||+++++ |++-+.
T Consensus 396 ~G~y~f-~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~ea---L~hpW~ 440 (475)
T KOG0615|consen 396 KGRYAF-GPLQWDRISEEALDLINWMLVVDPENRPSADEA---LNHPWF 440 (475)
T ss_pred cCcccc-cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHH---hcChhh
Confidence 555543 233456789999999999999999999998876 555543
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-48 Score=398.39 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=226.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
.+|+.++.||+|||+.||.+++..+|+.||+|++... ...+.+..|++|.+.|+| +||+.++.++++.++.||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H--pnIV~f~~~FEDs~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH--PNIVQFYHFFEDSNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC--CcEEeeeeEeecCCceEE
Confidence 5699999999999999999999999999999998653 234568899999999988 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|+|+| .++|..+++ ..+.+++.+++.++.||+.||.|||+++|||||||..|+|| +++.+|||+|||||..+..+
T Consensus 96 vLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 96 VLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCc
Confidence 99999 889999998 56789999999999999999999999999999999999999 58889999999999988755
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. ...++|||+.|.|||++.....+..+||||+|||||-||.|++||+. .+..+.|.+|.......
T Consensus 172 ~E-------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet---k~vkety~~Ik~~~Y~~---- 237 (592)
T KOG0575|consen 172 GE-------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET---KTVKETYNKIKLNEYSM---- 237 (592)
T ss_pred cc-------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc---chHHHHHHHHHhcCccc----
Confidence 33 24678999999999999999999999999999999999999999976 45677777777665543
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFD 286 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~ 286 (475)
+..++.+.++||.++|..||.+||++++| |++-|...|+..+
T Consensus 238 -P~~ls~~A~dLI~~lL~~~P~~Rpsl~~v---L~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 238 -PSHLSAEAKDLIRKLLRPNPSERPSLDEV---LDHPFFKSGFTPA 279 (592)
T ss_pred -ccccCHHHHHHHHHHhcCCcccCCCHHHH---hcCHhhhCCCcCC
Confidence 34678999999999999999999998877 6666667766543
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-48 Score=377.28 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=210.2
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
...++|.+.++||.|+||+||+|+++.++..||||.+..+.- .+-+..|+++++.++| +||+.++++....++.
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H--~nIV~l~d~~~~~~~i 84 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH--PNIVRLLDCIEDDDFI 84 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC--cceeeEEEEEecCCeE
Confidence 356789999999999999999999999999999998876642 2346789999999996 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC---CcEEEeecCCcc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA---NQVYIIDFGLAK 155 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~---~~vkL~DFGlA~ 155 (475)
||||||| ||+|.+++.. .+.+++.++..++.||+.||++||+++||||||||+||||+..... -.+||+|||+|+
T Consensus 85 ~lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999 8999999984 4579999999999999999999999999999999999999864223 579999999999
Q ss_pred cccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
.+.... ...+++|++.|||||++..+.|+.|+|+||+|+|||+|++|+.||.... ..+.+..+....
T Consensus 164 ~L~~~~--------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t---~~eL~~~~~k~~-- 230 (429)
T KOG0595|consen 164 FLQPGS--------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET---PKELLLYIKKGN-- 230 (429)
T ss_pred hCCchh--------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC---HHHHHHHHhccc--
Confidence 887543 2357899999999999999999999999999999999999999997643 344443333222
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
..++.+...+...+.+++...+..++.+|-++.+.
T Consensus 231 ~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 231 EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred cccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 22222333455667789999999999999886543
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-47 Score=383.37 Aligned_cols=268 Identities=24% Similarity=0.370 Sum_probs=225.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
-.++|++++.||+|+|++||+|+++.+++.||||++.+. .+.+-+.+|..+|..|.+ |+.|++|+.-+.++...
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~-hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSG-HPGIVKLYFTFQDEESL 149 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhC-CCCeEEEEEEeecccce
Confidence 357899999999999999999999999999999986543 345567889999999975 49999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|+|+||+ +|+|.++|++. +.|++..+..++.||+.||+|||++|||||||||+|||| +.++.+||+|||.|+.+.
T Consensus 150 YFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCC
Confidence 9999999 99999999854 679999999999999999999999999999999999999 689999999999999987
Q ss_pred cccccccc----cccc--CCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 159 DTATHQHI----PYRE--NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 159 ~~~~~~~~----~~~~--~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
.......- .+.. ...++||..|.+||++.....+..+|||+||||||+|+.|..||.+.+. ...+++|...
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne---yliFqkI~~l 302 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE---YLIFQKIQAL 302 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH---HHHHHHHHHh
Confidence 65432111 1111 2569999999999999999999999999999999999999999988554 3444555444
Q ss_pred cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011882 233 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 295 (475)
Q Consensus 233 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 295 (475)
.+. +..++|+.+.+||.++|..||.+|++.++|.+ + .|...+||.-+-
T Consensus 303 ~y~-----fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~---H-------pFF~~Vdw~nlw 350 (604)
T KOG0592|consen 303 DYE-----FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA---H-------PFFEGVDWENLW 350 (604)
T ss_pred ccc-----CCCCCCHHHHHHHHHHHccCccccccHHHHhh---C-------cccccCChhhhh
Confidence 332 45788999999999999999999999866643 2 344556676543
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-48 Score=372.70 Aligned_cols=266 Identities=21% Similarity=0.291 Sum_probs=224.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
-.++|+++++||+|+||+||+++.+.|++.+|+|++++.. .......|..|+..+.| |.|+.+...+.+.+..
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--PFIVKLIYSFQTEEKL 100 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--CcEeeeEEecccCCeE
Confidence 3578999999999999999999999999999999887653 23457789999988665 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|+|+||+ ||.|...++ ..+.|++..+..++.+|+.||.|||++|||||||||+|||| +..|+|+|+|||||+...
T Consensus 101 ylVld~~~GGeLf~hL~-~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQ-REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEEEeccCCccHHHHHH-hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcc
Confidence 9999999 889999988 45689999999999999999999999999999999999999 689999999999999655
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.... ...+++||+.|||||++.+..|+..+|+||||++||||++|..||.+ .+..+.+++|...+...
T Consensus 177 ~~~~-------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~---~~~~~~~~~I~~~k~~~-- 244 (357)
T KOG0598|consen 177 KDGD-------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA---EDVKKMYDKILKGKLPL-- 244 (357)
T ss_pred cCCC-------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC---ccHHHHHHHHhcCcCCC--
Confidence 4433 23568999999999999999999999999999999999999999987 45567777777766322
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCC----HHHHHHHHHHHHHHcCCCCCCccccccccccccc
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPD----YAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 300 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt----~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 300 (475)
....++.+.++++..+|..||++|.. +.+| ....+....+|+.+.....+
T Consensus 245 --~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~i----------k~HpfF~~inW~~l~~k~l~ 298 (357)
T KOG0598|consen 245 --PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEI----------KRHPFFKGINWEKLLAKKLS 298 (357)
T ss_pred --CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHh----------hcCcccccCCHHHHHhcCCC
Confidence 12337889999999999999999963 2221 22355667899987655443
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.3e-48 Score=358.48 Aligned_cols=243 Identities=25% Similarity=0.333 Sum_probs=206.9
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEE--eeEeCCEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRW--FGVEGDYNV 80 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~--~~~~~~~~~ 80 (475)
.+|+|.++||.|.||+||++.++.+|..||.|.++..... ..+..|+.+++.|+| +||+.++. +..+....+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H--pNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH--PNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC--chHHHHHHHhhhccchhhH
Confidence 4699999999999999999999999999999987654332 357889999999988 99998865 444555689
Q ss_pred EEEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 81 LVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHS--KS--FLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~--~g--IvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
|||||| +|+|..+++.. ++.+++.++++++.|++.||..+|. .. |+||||||.||+| +.+|.|||+|||
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfG 173 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFG 173 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccch
Confidence 999999 99999998743 4569999999999999999999999 44 9999999999999 588999999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
|++.+....+. ..+++|||.||+||.+.+..|+.++||||+||++|||+.-+.||.+. ...+...+|.+.
T Consensus 174 L~r~l~s~~tf-------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qg 243 (375)
T KOG0591|consen 174 LGRFLSSKTTF-------AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQG 243 (375)
T ss_pred hHhHhcchhHH-------HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcC
Confidence 99998876553 35679999999999999999999999999999999999999999985 444555566665
Q ss_pred cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 233 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 233 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
..+.... ..++.++..||..|+..|++.||+.
T Consensus 244 d~~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 244 DYPPLPD---EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CCCCCcH---HHhhhHHHHHHHHHccCCcccCCCc
Confidence 5433221 3467899999999999999999984
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1e-46 Score=354.39 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=212.3
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|+.+.++|+|+||+||+|+++.||+.||||.+....+.+ -..+|+++++.|+| +|++.+..++......+||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH--~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH--ENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc--chHHHHHHHHHhcceeEEE
Confidence 57999999999999999999999999999999876554433 35789999999987 9999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
+|||..++.+.++.....++.+.+..++.|++.|+.|+|+++||||||||+||||+ ..+.+||||||+|+.+..+..
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHhhcCCcc
Confidence 99999988888887777899999999999999999999999999999999999995 789999999999998875332
Q ss_pred ccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh----------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---------- 231 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~---------- 231 (475)
.-+.++.|.+|.|||.+.| .+|+..+||||+||++.||++|...|.+..+.+....+.+...
T Consensus 157 -------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 157 -------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred -------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHh
Confidence 1245688999999999998 6799999999999999999999999998655443333333221
Q ss_pred -------------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 232 -------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 232 -------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..-..+++.-..+++.-+.+|++.||..||++|++.++++
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 1112223333344556789999999999999999988875
No 11
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-45 Score=369.46 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=214.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeE-EEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC-EEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-VAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD-YNV 80 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~-vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~-~~~ 80 (475)
.+..+.+.||.|+||+||+|.+. |.. ||||++...... ..+..|+.++..++| +||+.+++++.+.. ..+
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~H--pNIV~f~G~~~~~~~~~~ 116 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRH--PNIVQFYGACTSPPGSLC 116 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCCceE
Confidence 44567778999999999999974 555 999998765422 368899999999877 99999999999887 789
Q ss_pred EEEEcC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcEEEeeCCCCC-cEEEeecCCccc
Q 011882 81 LVIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKR 156 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~-~vkL~DFGlA~~ 156 (475)
|||||+ +|+|.+++.. .+..+++..++.|+.||+.||.|||+++ ||||||||+|||| +... ++||+|||+++.
T Consensus 117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSRE 193 (362)
T ss_pred EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCcccee
Confidence 999999 9999999986 3678999999999999999999999999 9999999999999 4665 999999999987
Q ss_pred ccccccccccccccCCCCccCcccccccccc--CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHL--GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~--g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
...... ......||+.|||||++. ...|+.|+||||||++||||+||..||.+... .+....+.....
T Consensus 194 ~~~~~~-------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~~v~~~~~ 263 (362)
T KOG0192|consen 194 KVISKT-------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVASAVVVGGL 263 (362)
T ss_pred eccccc-------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCC
Confidence 654321 123368999999999999 55899999999999999999999999998654 333333333333
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
.. .+...+|+.+..++..||..||+.||++.+|...|+.+.....
T Consensus 264 Rp---~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 264 RP---PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CC---CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 22 2334589999999999999999999999999999998876543
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=372.03 Aligned_cols=264 Identities=23% Similarity=0.319 Sum_probs=217.4
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-hH--HHHHHHHHHHHhCCCCCcCeeEEeeEeCC-EE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-PQ--LQYEAKLYKILQGGSTGIPNLRWFGVEGD-YN 79 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-~~--~~~E~~il~~l~~~~~~i~~l~~~~~~~~-~~ 79 (475)
.+-++|.++++||.|.||.||+|+.+.+|+.||||.++.+-.. ++ -.+|++.++.|.. |+||+.+.....+.+ ..
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~-hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNP-HPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCC-CCcchhhHHHhhccCceE
Confidence 3567899999999999999999999999999999987655432 22 3568888887773 399999988888877 99
Q ss_pred EEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 80 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 80 ~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|+|||||.++|+++++..++.|++..+..|+.||++||+|+|.+|+.||||||+|||+. ....|||+|||+|+....
T Consensus 86 ~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 86 YFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREVRS 162 (538)
T ss_pred eeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEeccccccccccc
Confidence 99999999999999998888899999999999999999999999999999999999994 578999999999998765
Q ss_pred cccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc------
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------ 232 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~------ 232 (475)
.. || +.++.|.+|.|||+++. .-|+.+.||||+|||++|+.+-+..|.|....+...++-.+...
T Consensus 163 kp-----PY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 163 KP-----PY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred CC-----Cc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 43 23 45789999999999875 45899999999999999999999999986554443333333211
Q ss_pred ----------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 233 ----------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 233 ----------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
.....+..+...++.++.++|.+|+.+||++|||+.++ |+..|.+.+
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~a---l~~pffq~~ 297 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQA---LQHPFFQVG 297 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHH---hcCcccccc
Confidence 12334555666778999999999999999999999887 445554444
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.9e-46 Score=368.39 Aligned_cols=258 Identities=23% Similarity=0.316 Sum_probs=218.9
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeC--
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEG-- 76 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~-- 76 (475)
|+..+.|+.+++||+|.||.||+|++..+|+.||+|.+..+...+ ...+|+.||+.|.| +||+.+.....+.
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H--pNIikL~eivt~~~~ 190 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDH--PNIIKLEEIVTSKLS 190 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC--CcccceeeEEEecCC
Confidence 345577999999999999999999999999999999887766443 36789999999988 9999998887766
Q ss_pred CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 77 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
...|||+|||..+|.-++....-+|++.++..++.||+.||+|||++||+|||||.+|||| |..|.+||+|||||+.
T Consensus 191 ~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 191 GSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARF 267 (560)
T ss_pred ceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceee
Confidence 7899999999999999998666689999999999999999999999999999999999999 6899999999999998
Q ss_pred ccccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc---
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--- 232 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 232 (475)
+....... .+..+-|.+|.+||.++|.. |+.++|+||.||||.||+.|+..|++.+.....+++.++...
T Consensus 268 y~~~~~~~------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e 341 (560)
T KOG0600|consen 268 YTPSGSAP------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTE 341 (560)
T ss_pred ccCCCCcc------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCCh
Confidence 87654322 24567899999999999975 999999999999999999999999996655555544443211
Q ss_pred ------------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.....+.+.+..+|....+|+..+|.+||++|.|+.+.+
T Consensus 342 ~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 342 DYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred hccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 112223444677889999999999999999999988774
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-44 Score=364.90 Aligned_cols=248 Identities=25% Similarity=0.326 Sum_probs=212.6
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-------CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-------TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-------~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
...++|++++.||+|+||.|++|.+..+++.||||+++.. .....+.+|+.+++.+.++ +||++++.+....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~H-pnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSH-PNIIRLLEVFATP 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccC-CCEeEEEEEEecC
Confidence 3467899999999999999999999999999999987764 2344677899999999843 8999999999999
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC-CcEEEeecCCc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDFGLA 154 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~-~~vkL~DFGlA 154 (475)
...|+||||+ ||+|.+.+.. .+++.+.++..++.||+.|++|||++||+||||||+|||++ .+ +.+||+|||++
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld---~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD---GNEGNLKLSDFGLS 168 (370)
T ss_pred CeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec---CCCCCEEEeccccc
Confidence 9999999999 7899999986 77899999999999999999999999999999999999994 55 89999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCC-C-CCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-Q-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~-s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
....... ....+.+||+.|+|||++.+.. | +.++||||+||+||.|++|..||... +....+.+|...
T Consensus 169 ~~~~~~~-------~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~---~~~~l~~ki~~~ 238 (370)
T KOG0583|consen 169 AISPGED-------GLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS---NVPNLYRKIRKG 238 (370)
T ss_pred cccCCCC-------CcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc---cHHHHHHHHhcC
Confidence 8773111 1245789999999999999988 8 48999999999999999999999873 334455555554
Q ss_pred cccccHHHHhcCC-hHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 KVSTSIEALCRGY-PTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ~~~~~~~~l~~~~-p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.+. ++..+ ++++..|+.+||..||..|+++.+|+
T Consensus 239 ~~~-----~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 EFK-----IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred Ccc-----CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 443 23445 89999999999999999999988875
No 15
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=342.90 Aligned_cols=269 Identities=21% Similarity=0.296 Sum_probs=228.4
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
-.++|++++.||.|+||.|.+++.+.+|..+|+|+++..... +....|..+++.+.+ |.++++.+.+.+..+.
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~--PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH--PFLVKLYGTFKDNSNL 119 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC--ceeEEEEEeeccCCeE
Confidence 457899999999999999999999999999999998765422 346779999998885 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
||||||. ||-|..++..+ ++|++..++.++.||+.||+|||+++|++|||||+|||| |..|.+||+|||+|+...
T Consensus 120 ymvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVS 195 (355)
T ss_pred EEEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEec
Confidence 9999999 99999999854 579999999999999999999999999999999999999 689999999999999876
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
... -+.|||+.|+|||++....|+.++|.|||||++|||+.|..||.... ..+.|++|.+.++..
T Consensus 196 ~rT----------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~---~~~iY~KI~~~~v~f-- 260 (355)
T KOG0616|consen 196 GRT----------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN---PIQIYEKILEGKVKF-- 260 (355)
T ss_pred CcE----------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC---hHHHHHHHHhCcccC--
Confidence 542 36799999999999999999999999999999999999999998743 478889998887653
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccccccC
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 302 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~ 302 (475)
+..++.++++|+..+|+.|-.+| +..+..-.+++. +-++....+|.....+..+.+
T Consensus 261 ---P~~fs~~~kdLl~~LL~vD~t~R--~gnlknG~~dIk---~H~wF~~v~W~~i~~r~ie~P 316 (355)
T KOG0616|consen 261 ---PSYFSSDAKDLLKKLLQVDLTKR--FGNLKNGVEDIK---NHPWFKGVDWEAILQRKIEPP 316 (355)
T ss_pred ---CcccCHHHHHHHHHHHhhhhHhh--hcCcCCCccccc---cCcccccccHHHHhhccccCC
Confidence 46678999999999999999998 222222222322 234556789998766655443
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-45 Score=358.82 Aligned_cols=258 Identities=25% Similarity=0.406 Sum_probs=210.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC--EEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD--YNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~--~~~lv 82 (475)
.+|..++.||+|+||.||++.+.++|+.+|||.+..... ...+.+|+.++..|+ |++|+++++...... ..++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~--~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN--HPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC--CCCEEeeCCccccccCeeeEee
Confidence 458899999999999999999999999999998765521 345899999999999 499999988744333 78999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC-CCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++...+.+|++..+..++.||++||+|||++|||||||||+||||. . ++.+||+|||+++.....
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~---~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD---PSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe---CCCCeEEeccCccccccccc
Confidence 9999 9999999987666899999999999999999999999999999999999994 5 689999999999877641
Q ss_pred ccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... ......+.||+.|||||++.. ....+++|||||||++.||+||+.||.+. ......+..+.... ..+
T Consensus 172 ~~~----~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~---~~P 242 (313)
T KOG0198|consen 172 GTK----SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED---SLP 242 (313)
T ss_pred ccc----ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC---CCC
Confidence 111 112345789999999999995 33456999999999999999999999874 22233333443333 222
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
.++..++.+.++++..|+..||++|||+.+| |++.|...
T Consensus 243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eL---L~hpf~~~ 281 (313)
T KOG0198|consen 243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEEL---LEHPFLKQ 281 (313)
T ss_pred CCCcccCHHHHHHHHHHhhcCcccCcCHHHH---hhChhhhc
Confidence 5667789999999999999999999998887 56666544
No 17
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-45 Score=368.66 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=214.4
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
++++++||+|.||+||+|.+. ....||+|.++..... ..+..|+.+++.|+| ++++++++++..++..|||||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H--~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRH--EKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcc--cCeEEEEEEEecCCceEEEEEecc
Confidence 567899999999999999973 4458999998886554 678899999999998 89999999999999999999999
Q ss_pred CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 g~sL~~ll~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
.|+|.+++.. .+..+...+.+.++.|||+||+||+++++|||||-..|||| +++..|||+|||||+...++...
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d~~Y~-- 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGDDEYT-- 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCCCcee--
Confidence 9999999986 45679999999999999999999999999999999999999 57889999999999955544331
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
......-...|.|||.+....++.+||||||||+||||+| |+.||.++.. .+.++.+....... .+.+
T Consensus 360 ----~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn---~ev~~~le~GyRlp----~P~~ 428 (468)
T KOG0197|consen 360 ----ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN---EEVLELLERGYRLP----RPEG 428 (468)
T ss_pred ----ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH---HHHHHHHhccCcCC----CCCC
Confidence 1222234567999999999999999999999999999999 9999988654 34444443332221 2367
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
||+++.+++..||..+|++||||+.+...|++++..
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999998754
No 18
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-44 Score=364.11 Aligned_cols=272 Identities=21% Similarity=0.315 Sum_probs=216.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|++++.||+|+||.||+|+-+.||+.+|+|++++.... ..+..|..+|..... +.+++++..+.+.++.|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds--~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDS--PWVVKLYYSFQDKEYLY 217 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCC--CcEEEEEEEecCCCeeE
Confidence 47899999999999999999999999999999998765432 346778888887443 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|||||+ ||++..++. ..+.|++..+..++.+++.||+.||+.|||||||||+|+|| |..|++||+||||++.+..
T Consensus 218 LiMEylPGGD~mTLL~-~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLM-RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEEecCCccHHHHHH-hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhh
Confidence 999999 999999997 45689999999999999999999999999999999999999 6999999999999975532
Q ss_pred cccc------------------ccccc----c------------------cCCCCccCccccccccccCCCCCCchhHHH
Q 011882 160 TATH------------------QHIPY----R------------------ENKNLTGTARYASMNTHLGIEQSRRDDLES 199 (475)
Q Consensus 160 ~~~~------------------~~~~~----~------------------~~~~~~GT~~Y~APE~~~g~~~s~ksDIwS 199 (475)
.... ...+. + .....+|||.|||||++++..|+..+|+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 1100 00010 0 123468999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 200 LGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 200 lG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
|||||||||.|..||.+.+ ..+.+.+|..-+..-..+. ...++++.++||.+|+. ||++|....-+.++-.
T Consensus 374 LG~ImyEmLvGyPPF~s~t---p~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~---- 444 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSET---PQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK---- 444 (550)
T ss_pred HHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc----
Confidence 9999999999999998854 4555555554331111110 12456899999999999 9999986333333222
Q ss_pred HcCCCCCCcccccccc
Q 011882 280 REGFQFDYVFDWTILK 295 (475)
Q Consensus 280 ~~~~~~~~~~dw~~~~ 295 (475)
.++...++|+-..
T Consensus 445 ---HPfF~~v~W~~l~ 457 (550)
T KOG0605|consen 445 ---HPFFKGVDWDHLR 457 (550)
T ss_pred ---CCccccCCcchhh
Confidence 3556678898654
No 19
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-44 Score=368.23 Aligned_cols=271 Identities=21% Similarity=0.281 Sum_probs=225.5
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
-.++|.++++||+|+||+|+++..+.+++.+|||++++.. ..+.+..|..|+.... .||.+.+++..+...++.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-RHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-cCCeEeecccccccCCeE
Confidence 3578999999999999999999999999999999988754 3356888999999887 569999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|+||||+ ||++..+. ..+.|++..+..++..|+.||.|||++|||+||||.+|||| |..|.+||+|||+++...
T Consensus 445 ~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccC
Confidence 9999999 77743333 34679999999999999999999999999999999999999 689999999999999754
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.... .+.+++||+.|||||++.+..|+.++|+|||||+|||||.|+.||.+. +..+.+..|....+..
T Consensus 520 ~~g~-------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd---dEee~FdsI~~d~~~y-- 587 (694)
T KOG0694|consen 520 GQGD-------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD---DEEEVFDSIVNDEVRY-- 587 (694)
T ss_pred CCCC-------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHhcCCCCC--
Confidence 3222 346899999999999999999999999999999999999999999984 4456666666555443
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHH--HHHHHHHHHHHHcCCCCCCccccccccccccccCC
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYA--YLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVST 303 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~--~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~ 303 (475)
+..++.+..+|++++|..+|++|..+. +.-++..+ ++....||+.+...+.+++-
T Consensus 588 ---P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h-------pFFr~i~w~~L~~r~i~PPf 644 (694)
T KOG0694|consen 588 ---PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH-------PFFRSIDWDDLLNRRIKPPF 644 (694)
T ss_pred ---CCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC-------CccccCCHHHHhhccCCCCC
Confidence 356789999999999999999998752 11111222 34455789998877666544
No 20
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-43 Score=363.25 Aligned_cols=252 Identities=21% Similarity=0.300 Sum_probs=220.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.+-|++++-||.|+.|.|-+|++..||+.+|||++..... ...+.+|+-+|+++.| +|+..+++.++...+.|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H--pnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH--PNVLRLYDVWENKQHLY 88 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC--CCeeeeeeeeccCceEE
Confidence 4679999999999999999999999999999999876633 2358899999999988 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+|.||+ ||-|.+++- .++++++.++.+++.||+.|+.|+|..+|+||||||+|+|| +..+.|||+|||+|..-..
T Consensus 89 lvlEyv~gGELFdylv-~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLV-RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EEEEecCCchhHHHHH-hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccC
Confidence 999999 888988886 36789999999999999999999999999999999999999 5667799999999976443
Q ss_pred cccccccccccCCCCccCccccccccccCCCC-CCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~-s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.. ...+.||++.|+|||++.|.+| +.++||||+|||||.||+|++||++ ......+.++..+.+..
T Consensus 165 gk--------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLlKV~~G~f~M-- 231 (786)
T KOG0588|consen 165 GK--------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLLKVQRGVFEM-- 231 (786)
T ss_pred Cc--------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHHHHHcCcccC--
Confidence 22 2356799999999999999998 7999999999999999999999985 45677777877777653
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
+..++.+.++||.+|+..||..|.+.++| |++.|....
T Consensus 232 ---Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI---~kHP~l~g~ 269 (786)
T KOG0588|consen 232 ---PSNISSEAQDLLRRMLDVDPSTRITTEEI---LKHPFLSGY 269 (786)
T ss_pred ---CCcCCHHHHHHHHHHhccCccccccHHHH---hhCchhhcC
Confidence 47889999999999999999999997777 666665543
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.3e-43 Score=353.12 Aligned_cols=261 Identities=18% Similarity=0.307 Sum_probs=205.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEc-----cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEe-
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVE- 75 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~-----~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~- 75 (475)
-.++|++.++||+|+||.||+|.+. .+++.||||++...... ..+..|..++..+.+ |+||+.+++++..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~ 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGN-HLNVVNLLGACTKP 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhcc-CcceeeEEeEecCC
Confidence 3578999999999999999999753 34568999998654322 347789999888843 3899999887664
Q ss_pred CCEEEEEEEcC-CCCHHHHHHHcC--------------------------------------------------------
Q 011882 76 GDYNVLVIDLL-GPSLEDLFNFCS-------------------------------------------------------- 98 (475)
Q Consensus 76 ~~~~~lvme~~-g~sL~~ll~~~~-------------------------------------------------------- 98 (475)
....+++|||+ +++|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 45689999999 899999886431
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCC
Q 011882 99 -----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 173 (475)
Q Consensus 99 -----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~ 173 (475)
..+++.+++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+...... .....
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~-----~~~~~ 235 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDY-----VRKGS 235 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcch-----hcccC
Confidence 247888999999999999999999999999999999999 46789999999999865432211 11233
Q ss_pred CccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHH
Q 011882 174 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASY 252 (475)
Q Consensus 174 ~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~l 252 (475)
..++..|+|||++.+..++.++|||||||+||||++ |..||.+..... .....+..... ......+++++.++
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~l~~l 309 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFCQRLKDGTR----MRAPENATPEIYRI 309 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHHHhcCCC----CCCCCCCCHHHHHH
Confidence 456788999999999999999999999999999997 999998754321 11222222111 11235678999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 253 FHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 253 i~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
+..||..||++||++.+|++.|++++.+
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999998753
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.4e-43 Score=326.58 Aligned_cols=253 Identities=20% Similarity=0.228 Sum_probs=212.7
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.+|..+++||+|.||.||+|++..||+.||||.++..... -...+|++.++.++| +||+.+.+.+...+...||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h--~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH--PNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC--cchhhhhhhccCCCceEEE
Confidence 4789999999999999999999999999999998776443 357899999999986 9999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
+||+..+|+..++.....|+..++..++.++++||+|||++.|+||||||.|+||+ .++.+||+|||+|+.+.....
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCCCc
Confidence 99999999999997777899999999999999999999999999999999999994 889999999999999876544
Q ss_pred ccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV------- 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~------- 234 (475)
.. ..-+-|.+|.|||.+.|.. |+..+||||.|||+.||+.|..-|.|..+-+...++..+.....
T Consensus 157 ~~-------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 157 IQ-------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred cc-------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccc
Confidence 22 1226799999999999865 89999999999999999999988888655444333333221111
Q ss_pred -------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 -------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 -------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
......+....+.+..+|+..||.+||.+|.++.+.+
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQAL 279 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHh
Confidence 1112224445567889999999999999999988774
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6e-44 Score=362.19 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=216.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
.+.+.+...||+|.||+||+|.|- -.||||+++.+...+ .|+.|+.+|+.-+| .||+.+.+++....+ .|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH--~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH--ENILLFMGACMNPPL-AI 464 (678)
T ss_pred HHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcch--hhheeeehhhcCCce-ee
Confidence 456788999999999999999984 469999999876543 47889999987776 889999999988888 88
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|.-+| |.+|+.++.-...+|.+.+.+.|+.||++|+.|||.++|||||||..||+| .+++.|||+||||+..-..-
T Consensus 465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeee
Confidence 88999 889999998777789999999999999999999999999999999999999 46699999999999754332
Q ss_pred ccccccccccCCCCccCccccccccccCC---CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~---~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
...+ ......|...|||||+++.. +|+..+||||||||+|||++|.+||.. ....+.+..+..+.....
T Consensus 542 ~g~~-----q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi---~~~dqIifmVGrG~l~pd 613 (678)
T KOG0193|consen 542 SGEQ-----QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI---QNRDQIIFMVGRGYLMPD 613 (678)
T ss_pred cccc-----ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC---CChhheEEEecccccCcc
Confidence 1111 11345788999999999744 589999999999999999999999984 334455666666655566
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
...+..++|.++++|+..||.+++++||.+.+|+..|++++.
T Consensus 614 ~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 614 LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 667778899999999999999999999999999998888764
No 24
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.9e-42 Score=341.52 Aligned_cols=253 Identities=19% Similarity=0.258 Sum_probs=203.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC---CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~---~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.++||.|+||.||+|.+..+++.||||+++... ....+.+|+.+++.++| ++++.++.+.......++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH--ANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC--CCEeeEEEEEcCCCeEEEEE
Confidence 67999999999999999999999999999999876432 23357789999998876 89999999998899999999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
||+.++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 83 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 83 EYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred eCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCCc-
Confidence 999889999987666678999999999999999999999999999999999999 4778999999999976433211
Q ss_pred cccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--------
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 234 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 234 (475)
......||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.........+........
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred ------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 1133478999999999876 4589999999999999999999999987543222221211111000
Q ss_pred --------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 --------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 --------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..........++.++.+||..||.+||.+|||+.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 0011112235678899999999999999999988885
No 25
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=340.36 Aligned_cols=265 Identities=20% Similarity=0.307 Sum_probs=217.9
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.-.++|++...||.|.-++||+|..+.+++.||||+++.+... +.+.+|+..+..+.| |||+.++..+..+...|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H--PNIv~~~~sFvv~~~LW 100 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH--PNIVTYHCSFVVDSELW 100 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC--CCcceEEEEEEecceeE
Confidence 4467899999999999999999999999999999998766433 568899999998887 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 81 LVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
+||.|| +||+.+++... ...|++..+..|+++++.||.|||.+|.||||||+.|||| +.+|.|||+|||.+-.+.
T Consensus 101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLF 177 (516)
T ss_pred EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeec
Confidence 999999 99999998743 4459999999999999999999999999999999999999 589999999999987776
Q ss_pred ccccccccccccCCCCccCccccccccccC--CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc-
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS- 235 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g--~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~- 235 (475)
+..... .++. ++++||++|||||+++. ..|+.|+||||||++..||++|..||...... +..+.++.. ..+
T Consensus 178 ~~G~R~--~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--kvLl~tLqn-~pp~ 251 (516)
T KOG0582|consen 178 DSGDRQ--VTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--KVLLLTLQN-DPPT 251 (516)
T ss_pred ccCcee--eEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--HHHHHHhcC-CCCC
Confidence 654322 2333 78899999999999543 35999999999999999999999999875442 222233322 222
Q ss_pred ----ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 236 ----TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 236 ----~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
..-....+.++..|++++..||..||.+||+++++ |+..|.+..
T Consensus 252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL---lkh~FFk~~ 299 (516)
T KOG0582|consen 252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL---LKHAFFKKA 299 (516)
T ss_pred cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH---hccHHHhhc
Confidence 11112235577899999999999999999999887 555555444
No 26
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.3e-42 Score=340.42 Aligned_cols=243 Identities=19% Similarity=0.250 Sum_probs=198.4
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|..++..+.+ ++++.+..++.+.+..++|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~--~~iv~~~~~~~~~~~~~lv 78 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS--RFVVSLAYAYETKDALCLV 78 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCC--CcEEEEEEEEccCCeEEEE
Confidence 48999999999999999999999999999998764321 1245678888888866 8899998888889999999
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+ ++++.+||+|||++..+...
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCC
Confidence 9999 88998877543 3468999999999999999999999999999999999999 57789999999999865432
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. .....||..|+|||++.+..++.++|||||||+||||++|+.||.+.......+.+..... .....
T Consensus 156 ~~--------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~ 223 (285)
T cd05631 156 ET--------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK----EDQEE 223 (285)
T ss_pred Ce--------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh----ccccc
Confidence 21 1235789999999999999999999999999999999999999987544322222222111 11122
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
+...++.++.+|+.+||..||++||++
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGC 250 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence 345678999999999999999999973
No 27
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.9e-43 Score=335.03 Aligned_cols=256 Identities=19% Similarity=0.221 Sum_probs=209.0
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEee--EeCC
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFG--VEGD 77 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~--~~~~ 77 (475)
+-.+.|+.+.+|++|+||.||+|+++.|++.||+|.++.+.... .-.+|+.++..++ |+||+.+..+. ..-+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~--H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR--HPNIVEVKEVVVGSNMD 150 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC--CCCeeeeEEEEeccccc
Confidence 34567999999999999999999999999999999988765433 3567888877766 49999996554 4567
Q ss_pred EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 78 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 78 ~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
..|||||||..+|..+++..+.+|...++..++.|++.||+|||.+.|+||||||+|+|+ .+.|.+||+|||+|+.+
T Consensus 151 ~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 151 KIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhh
Confidence 799999999999999999888899999999999999999999999999999999999999 58899999999999998
Q ss_pred cccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-- 234 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-- 234 (475)
..+.. ..+..+-|.+|.|||.++|.. |+...|+||+|||+.||++++.-|.|....+...++.++....-
T Consensus 228 gsp~k-------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 228 GSPLK-------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred cCCcc-------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 77532 224567899999999999876 89999999999999999999999998665544444444321110
Q ss_pred -----------------cccHHHH---hc--CChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 -----------------STSIEAL---CR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 -----------------~~~~~~l---~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+...+ +. ++++.-.+|+..+|.+||.+|.|+.+.+
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L 359 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGL 359 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhh
Confidence 0000011 11 1346778999999999999999988763
No 28
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=357.25 Aligned_cols=252 Identities=21% Similarity=0.365 Sum_probs=210.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
..|...++||+|+.|.||.|..+.+++.||||.++.... .+-+..|+.+++.++| +||+++...+...+..|+|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H--~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH--PNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc--hHHHHHHHHhcccceeEEEEe
Confidence 468889999999999999999999999999998766543 3457788888887776 899998777777799999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|+ |++|.+++.. ..+++.++..|+++++.||+|||.+||+|||||.+|||++ .++.+||+|||+|..+.....
T Consensus 351 ym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 351 YMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred ecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeeccccccC-
Confidence 99 9999999973 3599999999999999999999999999999999999995 778899999999998876554
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
...+++||+.|||||+.....|++++||||||+|++||+.|+.||-..+. .+.+..|.....+. -....
T Consensus 425 ------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P---lrAlyLIa~ng~P~--lk~~~ 493 (550)
T KOG0578|consen 425 ------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP---LRALYLIATNGTPK--LKNPE 493 (550)
T ss_pred ------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh---HHHHHHHhhcCCCC--cCCcc
Confidence 23678999999999999999999999999999999999999999976333 22222222211111 11235
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.++++|++|+.+||..|+++|+++.+| |++-|.+
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eL---L~HpFl~ 527 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKEL---LEHPFLK 527 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHH---hcChhhh
Confidence 678999999999999999999998887 5565543
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.8e-43 Score=355.14 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=216.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|-+.+.||+|+||.||+|+.+.+.+.||||.+.+....+ .+.+|++|++.|+| +||+.++..++.....|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH--pniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH--PNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC--cchhhHHHhhcccceEEEE
Confidence 57999999999999999999999999999999886554332 48899999999988 9999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
.||+-|+|..++.+ ..+++++.+..|+.|++.||.|||+.+|+|||+||.|||+ +..+.+|+||||+|+.+.....
T Consensus 80 te~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence 99997799999984 5689999999999999999999999999999999999999 5889999999999998765322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......||+.|||||...+.+|+..+|+||||||+|||+.|+.||.. ....+.+..|.......+
T Consensus 156 -------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a---~si~~Lv~~I~~d~v~~p----- 220 (808)
T KOG0597|consen 156 -------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA---RSITQLVKSILKDPVKPP----- 220 (808)
T ss_pred -------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH---HHHHHHHHHHhcCCCCCc-----
Confidence 12456899999999999999999999999999999999999999965 445566666665554433
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
...+..|..+++..|.+||..|.+..++ +.+.|.+.
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~L---l~HpF~k~ 256 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDL---LGHPFWKG 256 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHH---hcChHHhh
Confidence 3567899999999999999999997766 55555443
No 30
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.1e-42 Score=345.96 Aligned_cols=238 Identities=21% Similarity=0.311 Sum_probs=202.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|+.++..+.| ++|+.++..+..++..|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH--PFIVNMMCSFQDENRVY 94 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC--CCCCcEEEEEEcCCEEE
Confidence 478999999999999999999999999999999876432 22357789999888865 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++....
T Consensus 95 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCC
Confidence 999999 8899998874 4578999999999999999999999999999999999999 5788999999999986643
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
.. ....||+.|+|||++.+..++.++|||||||+||||++|..||.+. ...+.+..+......
T Consensus 171 ~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~---- 233 (329)
T PTZ00263 171 RT----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD---TPFRIYEKILAGRLK---- 233 (329)
T ss_pred Cc----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC---CHHHHHHHHhcCCcC----
Confidence 21 2357999999999999999999999999999999999999999763 334444555443322
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
+...++..+.+|+.+||..||.+||+.
T Consensus 234 -~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 234 -FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 234578899999999999999999973
No 31
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-42 Score=343.45 Aligned_cols=236 Identities=22% Similarity=0.347 Sum_probs=200.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|..+++.+.| ++|+.++++..+....++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~l 78 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH--PFIIRLFWTEHDQRFLYM 78 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC--CcHhhhHhhhccCCeEEE
Confidence 47999999999999999999999999999999876432 12346778888888876 999999998889999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.+...
T Consensus 79 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 79 LMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred EEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCC
Confidence 99999 8899999874 4579999999999999999999999999999999999999 47789999999999866432
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
. ....||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ....+..+......
T Consensus 155 ~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~~----- 216 (291)
T cd05612 155 T----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN---PFGIYEKILAGKLE----- 216 (291)
T ss_pred c----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCcC-----
Confidence 1 23579999999999999999999999999999999999999997743 33444444433321
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCC
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt 266 (475)
+...++..+.++|.+||+.||.+||+
T Consensus 217 ~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 217 FPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CCccCCHHHHHHHHHHcCCCHHHccC
Confidence 23456889999999999999999995
No 32
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4e-42 Score=338.12 Aligned_cols=254 Identities=20% Similarity=0.226 Sum_probs=201.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+|+.+++.++| ++++.+..++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQ--ENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCC--ccccchhhhEecCCEEEEE
Confidence 579999999999999999999999999999998765432 2356788888888876 8999998888889999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||+.+++.+.+......+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCccccccccc
Confidence 9999666656665455679999999999999999999999999999999999999 4778999999999987643221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 234 (475)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||.+.........+..+.....
T Consensus 156 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 156 A------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred c------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 1 11245789999999999998999999999999999999999999987433222211111110000
Q ss_pred ----------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 ----------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 ----------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..........++.++.+|+.+||..||++||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0000111223678899999999999999999998775
No 33
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.5e-42 Score=349.44 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=202.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|+++++||+|+||.||+|.+..+++.||||+++... ....+..|.+++..+.+ ++|+.++.++...+..|+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~iv~~~~~~~~~~~~~l 78 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS--EWLVKLLYAFQDDEYLYL 78 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC--CCCccEEEEEEcCCEEEE
Confidence 57999999999999999999999999999999986432 22346678888887764 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.....
T Consensus 79 v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~~ 154 (333)
T cd05600 79 AMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVTY 154 (333)
T ss_pred EEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCcccccc
Confidence 99999 8999999974 4579999999999999999999999999999999999999 57889999999999865431
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---ccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV---STS 237 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~---~~~ 237 (475)
.....||+.|+|||++.+..++.++|||||||+||||++|..||.+... .+.+..+..... ...
T Consensus 155 ----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~ 221 (333)
T cd05600 155 ----------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP---NETWENLKYWKETLQRPV 221 (333)
T ss_pred ----------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH---HHHHHHHHhccccccCCC
Confidence 2345799999999999999999999999999999999999999987433 222333222111 000
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.......++.++.+++.+||..+|++||++.+|+
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll 255 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIK 255 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHH
Confidence 0000124688999999999999999999977664
No 34
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1e-41 Score=338.55 Aligned_cols=252 Identities=20% Similarity=0.264 Sum_probs=201.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|++.++||+|+||.||+|.+..+++.||||++..... .....+|+.+++.+.| ++++.++.+....+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH--ANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC--CCcCeEEEEEecCCeEEEE
Confidence 4789999999999999999999999999999999865432 2356789999988876 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||++++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 158 (303)
T cd07869 82 FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPSH 158 (303)
T ss_pred EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCCc
Confidence 9999999999887666679999999999999999999999999999999999999 5778999999999975432211
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV------- 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~------- 234 (475)
......||+.|+|||++.+. .++.++|||||||+||||++|..||.+... ....+..+.....
T Consensus 159 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 229 (303)
T cd07869 159 -------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLERIFLVLGTPNEDTW 229 (303)
T ss_pred -------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHhCCCChhhc
Confidence 11335789999999998764 589999999999999999999999987533 1222222111000
Q ss_pred ------------------cccHHHHh--cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 ------------------STSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 ------------------~~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
...+.... ..+++++.+|+..||+.||.+||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l 286 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL 286 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence 00001111 12457889999999999999999988774
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.7e-42 Score=340.99 Aligned_cols=261 Identities=18% Similarity=0.261 Sum_probs=202.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEcc----------------CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ----------------TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTG 65 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~----------------~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~ 65 (475)
..++|++.++||+|+||.||+|.+.. ++..||||++...... ..+.+|++++..+.| ++
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD--PN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC--CC
Confidence 35789999999999999999998532 3457999998754322 357789999888865 89
Q ss_pred cCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCce
Q 011882 66 IPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS------------------RKLSLKTVLMLADQMINRVEFVHSKSFL 126 (475)
Q Consensus 66 i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIv 126 (475)
|+.+++++...+..+++|||+ +++|.+++.... ..+++..++.|+.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 999999999889999999999 889999886421 2367889999999999999999999999
Q ss_pred ecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHH
Q 011882 127 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY 206 (475)
Q Consensus 127 HrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~e 206 (475)
||||||+|||+ +..+.+||+|||+++.+..... +.......++..|+|||++.+..++.++|||||||++||
T Consensus 161 H~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 232 (304)
T cd05096 161 HRDLATRNCLV---GENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWE 232 (304)
T ss_pred ccCcchhheEE---cCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence 99999999999 4678999999999986543221 111233456889999999998899999999999999999
Q ss_pred HHc--CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 207 FLR--GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 207 llt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
|++ +..||.+............................+|..+.+++.+||..||++||++.+|.+.|+
T Consensus 233 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 233 ILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 986 678887754322222111111111001111122457899999999999999999999999988875
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-44 Score=350.98 Aligned_cols=254 Identities=21% Similarity=0.339 Sum_probs=214.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch---HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~---~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
...|...+.||.|.||.||+|.+..+++.||||++..+.... +++.|+.++..+.. ++|..+++.+..+...+++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~--~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS--PNITEYYGSYLKGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc--chHHhhhhheeecccHHHH
Confidence 456888899999999999999999999999999998776544 57788888887776 8899999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||| ||++.++++ .+..+.+..+..|+.+++.||.|||.++.+|||||+.||||. ..+.|||+|||++-.+....
T Consensus 90 Mey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HHHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeechh
Confidence 9999 999999998 344568999999999999999999999999999999999996 55999999999998776644
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ...+++||+.|||||++.+..|+.|+||||||++.|||++|..||.......... +. .....+.+
T Consensus 166 ~-------rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf----lI---pk~~PP~L 231 (467)
T KOG0201|consen 166 K-------RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF----LI---PKSAPPRL 231 (467)
T ss_pred h-------ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE----ec---cCCCCCcc
Confidence 3 2368899999999999998899999999999999999999999998876622111 11 11222334
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
...+++.|++|+..||.+||+.||++.+| |++-|.+..
T Consensus 232 ~~~~S~~~kEFV~~CL~k~P~~RpsA~~L---LKh~FIk~a 269 (467)
T KOG0201|consen 232 DGDFSPPFKEFVEACLDKNPEFRPSAKEL---LKHKFIKRA 269 (467)
T ss_pred ccccCHHHHHHHHHHhhcCcccCcCHHHH---hhhHHHHhc
Confidence 45788999999999999999999999887 555555553
No 37
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.5e-41 Score=336.27 Aligned_cols=259 Identities=26% Similarity=0.496 Sum_probs=195.5
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccC---CeEEEEEEeccCCCchHHHHHH------------HHHHHH-hCCCCCcC
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKHPQLQYEA------------KLYKIL-QGGSTGIP 67 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~---~~~vAvKi~~~~~~~~~~~~E~------------~il~~l-~~~~~~i~ 67 (475)
+.+++|++.++||+|+||.||+|.+..+ +..+|+|+....... +..|. ..+..+ ...|++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENET--IVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCc--hhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 4678999999999999999999998777 678888875443321 11111 111122 22458888
Q ss_pred eeEEeeEeCC----EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC
Q 011882 68 NLRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 143 (475)
Q Consensus 68 ~l~~~~~~~~----~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 143 (475)
.+++.+.... +.+++|+++..++.+++... ..+++..++.|+.||+.||.|||+++|+||||||+|||+ +..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~ 162 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGN 162 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCC
Confidence 8887665443 56889999988998888743 346888999999999999999999999999999999999 467
Q ss_pred CcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHH
Q 011882 144 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK 223 (475)
Q Consensus 144 ~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~ 223 (475)
+.++|+|||+|+.+..................||+.|+|||++.+..++.++|||||||+||||++|..||.+.......
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 88999999999877543221111111223457999999999999999999999999999999999999999876432221
Q ss_pred HH------HHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 224 QK------YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 224 ~~------~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
.. +..+...+ .....+|.++.+++..||..+|++||++++|++.|
T Consensus 243 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFIKRLHEGK------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHHHHhhhhh------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11 11111111 12356789999999999999999999999999876
No 38
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1e-41 Score=335.71 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=200.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEcc-CCeEEEEEEeccCCC----chHHHHHHHHHHHHhC-CCCCcCeeEEeeE-----e
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTK----HPQLQYEAKLYKILQG-GSTGIPNLRWFGV-----E 75 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~-~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~-~~~~i~~l~~~~~-----~ 75 (475)
++|++.+.||+|+||.||+|.+.. +++.||||++..... ...+.+|..+++.+.. .|++|+.+++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999864 468899998765432 2346678888877753 4699999987764 3
Q ss_pred CCEEEEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 76 GDYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 76 ~~~~~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
....++||||++++|.+++.... ..+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccce
Confidence 45689999999989999987543 458999999999999999999999999999999999999 47789999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc--
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-- 232 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~-- 232 (475)
+.+.... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... +.+..+...
T Consensus 158 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~---~~~~~i~~~~~ 226 (290)
T cd07862 158 RIYSFQM--------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIG 226 (290)
T ss_pred EeccCCc--------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH---HHHHHHHHHhC
Confidence 8654321 123457899999999999989999999999999999999999999875432 222222211
Q ss_pred --------------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 --------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 --------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.....++.+...++..+.+++.+||+.||++||++.+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 111223344456788999999999999999999988885
No 39
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1e-41 Score=343.15 Aligned_cols=254 Identities=19% Similarity=0.267 Sum_probs=198.7
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC-----CE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG-----DY 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~-----~~ 78 (475)
+|++.++||+|+||.||+|.+..+++.||||.+.... ....+.+|+.+++.++| ++|+.++.+.... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH--PDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCC--CCEeeecceEeccCCCCCce
Confidence 5999999999999999999999999999999876432 22357789999988875 8999887766432 35
Q ss_pred EEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
.|+||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 799999999999998874 4469999999999999999999999999999999999999 578899999999998654
Q ss_pred ccccccccccccCCCCccCccccccccccC--CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH--------
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK-------- 228 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g--~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~-------- 228 (475)
...... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+..
T Consensus 155 ~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 155 NDTPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccCcc----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 322111 01134579999999999876 5789999999999999999999999976432111111111
Q ss_pred ----H-----------hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 229 ----I-----------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 229 ----i-----------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
+ ...............+++++.+++.+||..||++||++.+++
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence 0 011111222333356788999999999999999999988774
No 40
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.1e-42 Score=355.81 Aligned_cols=206 Identities=25% Similarity=0.344 Sum_probs=179.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-CchHHHHHHHHHHHHhC----CCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQG----GSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~~~~~E~~il~~l~~----~~~~i~~l~~~~~~~~~~ 79 (475)
+.-+|+|++.||+|.||+|.+|.+..|++.||||+++.+. ...+...|+.+|..|+. ..-|++++++++...++.
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 3458999999999999999999999999999999987654 34677889999999982 336788999999999999
Q ss_pred EEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|||+|++..+|.++++..+ ..|+...+..|+.||+.||.+||+.||||+||||+||||..- ....|||+|||.|....
T Consensus 264 ciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~-~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 264 CIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP-KRSRIKVIDFGSSCFES 342 (586)
T ss_pred eeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC-CcCceeEEecccccccC
Confidence 9999999999999998654 349999999999999999999999999999999999999643 34489999999998655
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 221 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~ 221 (475)
+... +++-+..|.|||+++|.+|+.+.||||||||+.||++|...|.|....+
T Consensus 343 q~vy----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 343 QRVY----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred Ccce----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 4322 4577889999999999999999999999999999999988888754433
No 41
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.2e-42 Score=345.73 Aligned_cols=237 Identities=19% Similarity=0.272 Sum_probs=195.5
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||||+++... ....+..|..++..+.| ++|+.+..++...+..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH--PFLTALKYSFQTHDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC--CCCCCEEEEEEcCCEEEEEEeCCC
Confidence 47999999999999999999999999886432 12345678888887765 89999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~---- 150 (323)
T cd05571 79 GGELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGA---- 150 (323)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCC----
Confidence 8899888874 4579999999999999999999999999999999999999 5778999999999975432211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
.....+||+.|+|||++.+..++.++|||||||+||||++|..||.... ....+..+..... .+...++
T Consensus 151 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~~~~~~~~-----~~p~~~~ 219 (323)
T cd05571 151 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELILMEEI-----RFPRTLS 219 (323)
T ss_pred ---cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC---HHHHHHHHHcCCC-----CCCCCCC
Confidence 1234579999999999999999999999999999999999999997632 2333333333222 2335678
Q ss_pred HHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKP-----DYAYL 270 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RP-----t~~~l 270 (475)
+++.++|..||..||++|| ++.++
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l 248 (323)
T cd05571 220 PEAKSLLAGLLKKDPKQRLGGGPEDAKEI 248 (323)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHH
Confidence 9999999999999999999 66655
No 42
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-41 Score=341.32 Aligned_cols=240 Identities=21% Similarity=0.257 Sum_probs=198.5
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+|++++.||+|+||.||+|.+..+++.||||++.... ....+..|..++..+.+. ++++.++.++...+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP-PFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC-CceeeeEEEEEcCCEEEEE
Confidence 5899999999999999999999999999999886432 223456777887777653 6788888888888999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 80 MEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCC
Confidence 9999 8899988864 4568999999999999999999999999999999999999 467899999999987532211
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||.+.. ..+.+..+...... +
T Consensus 156 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~~~i~~~~~~-----~ 220 (324)
T cd05587 156 K-------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQSIMEHNVS-----Y 220 (324)
T ss_pred C-------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCCC-----C
Confidence 1 1234579999999999999999999999999999999999999997643 33444444433221 2
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
...++.++.+++.+||..||.+|++.
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 221 PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 35678999999999999999999986
No 43
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.6e-41 Score=353.19 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=196.3
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEe--------C
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVE--------G 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~--------~ 76 (475)
..++|+++++||+|+||.||+|.+..+++.||||.+... .....+|+.+++.+.| ++++.+..++.. .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~--~~~~~~Ei~il~~l~h--~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--PQYKNRELLIMKNLNH--INIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC--cchHHHHHHHHHhcCC--CCCcceeeeEeecccccCCCc
Confidence 356899999999999999999999999999999987543 2345678999988876 889888665432 2
Q ss_pred CEEEEEEEcCCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 DYNVLVIDLLGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
.+.++||||++++|.+++.. ....+++..++.++.||+.||.|||++|||||||||+||||+ ...+.+||+|||+
T Consensus 140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL~DFGl 217 (440)
T PTZ00036 140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKLCDFGS 217 (440)
T ss_pred eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceeeecccc
Confidence 35779999998899887753 245699999999999999999999999999999999999994 2345799999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
|+.+..... .....||+.|+|||++.+. .++.++|||||||+||||++|..||.+.........+..+...
T Consensus 218 a~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~ 289 (440)
T PTZ00036 218 AKNLLAGQR--------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGT 289 (440)
T ss_pred chhccCCCC--------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 987643221 1245789999999998875 5899999999999999999999999875432222111111100
Q ss_pred c---------------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 K---------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ~---------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. .......++...|.++.+||.+||..||.+||++.+++
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 0 00011122345678999999999999999999998874
No 44
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-41 Score=330.71 Aligned_cols=254 Identities=14% Similarity=0.229 Sum_probs=204.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEc---cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
.++|++.+.||+|+||.||+|.+. ..+..||+|+++..... ..+..|+.++..++ |++++.+.+++...+..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD--HSNIVRLEGVITRGNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC--CCCcCeEEEEEecCCCc
Confidence 457999999999999999999875 34678999988765332 24566777777665 49999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
++||||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +.++.++|+|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCccccccc
Confidence 9999999 779999987655679999999999999999999999999999999999999 467899999999876532
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
.... .......++..|+|||.+.+..++.++|||||||++||+++ |..||.+... ...+..+......
T Consensus 159 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~~~~~-- 227 (266)
T cd05064 159 SEAI------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---QDVIKAVEDGFRL-- 227 (266)
T ss_pred ccch------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHHCCCCC--
Confidence 2111 01122345778999999999999999999999999999775 9999987543 2223333322211
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
.....+|..+.+++.+||+.+|++||++.+|.+.|..+
T Consensus 228 --~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 --PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 12356889999999999999999999999999988765
No 45
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-41 Score=348.06 Aligned_cols=250 Identities=16% Similarity=0.189 Sum_probs=199.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.++|+++++||+|+||.||+|.+..+++.||||... ...+.+|+.+++.++| ++|+.++.++......++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~H--pnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINH--PSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCC--CCCCCEeEEEEECCeeEEEEec
Confidence 467999999999999999999999999999999753 2457889999999876 9999999999999999999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 86 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 86 ~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
++++|..++.. ...+++.+++.|+.||+.||.|||++|||||||||+|||| +..+.+||+|||+|+........
T Consensus 165 ~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~~~~-- 238 (391)
T PHA03212 165 YKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDINAN-- 238 (391)
T ss_pred CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCccccccccccc--
Confidence 99999888864 4569999999999999999999999999999999999999 47789999999999754332111
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC----CHHHHHHHHhhcc--------
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEKK-------- 233 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~----~~~~~~~~i~~~~-------- 233 (475)
......||+.|+|||++.+..++.++|||||||+||||++|..||...... .....+..+....
T Consensus 239 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 239 ----KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ----ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 123457999999999999999999999999999999999999887542211 0011111111000
Q ss_pred ------------------c----cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 234 ------------------V----STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 234 ------------------~----~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. ..........+|.++.+||.+||++||.+||++.+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 0 0000011124577899999999999999999998875
No 46
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.8e-41 Score=347.35 Aligned_cols=257 Identities=21% Similarity=0.342 Sum_probs=204.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCC-----eEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTN-----EEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~-----~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
++|++.+.||+|+||.||+|.+..++ +.||||+++..... ..+..|+.+++.+.. |++|+.+++.+...+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~-h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQ-HKNIVNLLGACTHGGP 116 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhcc-CCceeeEeeEecCCCC
Confidence 46999999999999999999875443 57999998754332 346789999988843 3999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcC-----------------------------------------------------------
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS----------------------------------------------------------- 98 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~----------------------------------------------------------- 98 (475)
.++||||+ +++|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999 899999885321
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 99 ----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 99 ----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
..+++..++.|+.||+.||.|||++||+||||||+|||++ +++.+||+|||+++.+......
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~----- 268 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNY----- 268 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcce-----
Confidence 2478889999999999999999999999999999999994 6788999999999865433211
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 247 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 247 (475)
.......++..|+|||++.+..++.++|||||||++|||++ |..||....... .+.......... .....+|+
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~~~~~~~~~~~---~~~~~~~~ 342 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KFYKMVKRGYQM---SRPDFAPP 342 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH---HHHHHHHcccCc---cCCCCCCH
Confidence 11123345678999999999899999999999999999997 999997754321 122222111111 11234689
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 248 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 248 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
++.+++.+||+.||++||++.+|.++|++++
T Consensus 343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999875
No 47
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5e-41 Score=337.21 Aligned_cols=237 Identities=20% Similarity=0.286 Sum_probs=194.2
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||++.+..+|+.||+|++.... ....+..|..+++.+.| ++++.++.++...+..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH--PFLTALKYAFQTHDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC--CCCcceeeEEecCCEEEEEEeCCC
Confidence 47999999999999999999999999886432 12345678888887765 89999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~---- 150 (323)
T cd05595 79 GGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA---- 150 (323)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCC----
Confidence 8899888863 4579999999999999999999999999999999999999 5778999999999875432211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||+.|+|||++.+..++.++|||||||+||||++|..||.... ....+..+...... +...++
T Consensus 151 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---~~~~~~~~~~~~~~-----~p~~~~ 219 (323)
T cd05595 151 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HERLFELILMEEIR-----FPRTLS 219 (323)
T ss_pred ---ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCCC-----CCCCCC
Confidence 1134579999999999999999999999999999999999999997643 23333333322221 235678
Q ss_pred HHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKP-----DYAYL 270 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RP-----t~~~l 270 (475)
+++.++|..||..||++|| ++.++
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~ 248 (323)
T cd05595 220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEV 248 (323)
T ss_pred HHHHHHHHHHccCCHHHhCCCCCCCHHHH
Confidence 9999999999999999998 55554
No 48
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.3e-42 Score=342.46 Aligned_cols=243 Identities=20% Similarity=0.276 Sum_probs=200.8
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||+|+||.||+|.+..+++.||||+++... ....+..|..++..+.| ++|+.+..++...+..|+||||+ ++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC--PFIVPLKFSFQSPEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--CcEeceeeEEecCCeEEEEEcCCCCC
Confidence 699999999999999999999999876432 12346678888887765 99999998888999999999999 88
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 79 ~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~------ 148 (312)
T cd05585 79 ELFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDD------ 148 (312)
T ss_pred cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCC------
Confidence 99998874 4579999999999999999999999999999999999999 5778999999999985433221
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 248 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 248 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+...++++
T Consensus 149 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~~~ 219 (312)
T cd05585 149 -KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN---VNEMYRKILQEPL-----RFPDGFDRD 219 (312)
T ss_pred -ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC---HHHHHHHHHcCCC-----CCCCcCCHH
Confidence 1234579999999999999999999999999999999999999997643 3344444443322 233567899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 249 FASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 249 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
+.+++.+||..||.+||++..+.++|.+.+
T Consensus 220 ~~~li~~~L~~dp~~R~~~~~~~e~l~hp~ 249 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence 999999999999999998766666676644
No 49
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.3e-41 Score=338.46 Aligned_cols=240 Identities=21% Similarity=0.268 Sum_probs=197.5
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHh-CCCCCcCeeEEeeEeCCEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQ-GGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~-~~~~~i~~l~~~~~~~~~~~lv 82 (475)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+..|.+++..+. ..|++|+.++.++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 789999999999999999999999999999986432 2234667777766554 2469999999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|..++. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 9999 889988775 4579999999999999999999999999999999999999 577899999999987543221
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ..+.+..+...... +
T Consensus 156 ~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~---~~~~~~~i~~~~~~-----~ 220 (324)
T cd05589 156 D-------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD---EEEVFDSIVNDEVR-----Y 220 (324)
T ss_pred C-------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC-----C
Confidence 1 1235679999999999999999999999999999999999999997643 23333333332221 2
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
...++.++.++|.+||..||.+||+..
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 345789999999999999999999643
No 50
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3e-41 Score=340.28 Aligned_cols=271 Identities=18% Similarity=0.272 Sum_probs=211.2
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
..++|++.++||+|+||.||+|.+..++..||+|++...... ..+.+|+++++.++| ++|+.+++++...+..++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS--PYIVGFYGAFYSDGEISI 80 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC--CcccceeEEEEECCEEEE
Confidence 467899999999999999999999999999999987765332 357789999998875 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||||+ +++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||+ +..+.+||+|||++..+..
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 81 CMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhh
Confidence 99999 8899999874 44689999999999999999999985 79999999999999 4678899999999976543
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH------------
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE------------ 227 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~------------ 227 (475)
.. .....||..|+|||++.+..++.++|||||||++|||++|..||...........+.
T Consensus 157 ~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (333)
T cd06650 157 SM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESET 227 (333)
T ss_pred hc---------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcccccc
Confidence 21 134578999999999999899999999999999999999999997533211110000
Q ss_pred -------------------------HHhhccccccHHHHh-cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 228 -------------------------KISEKKVSTSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 228 -------------------------~i~~~~~~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
.+.........+.+. ..++.++.+|+.+||..||++||++.+|+ .+.|.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell---~h~~~~~ 304 (333)
T cd06650 228 SPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLM---VHAFIKR 304 (333)
T ss_pred CcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHh---hCHHHhc
Confidence 000000000000011 13578899999999999999999988884 4444443
Q ss_pred C-CCCCCcccccc
Q 011882 282 G-FQFDYVFDWTI 293 (475)
Q Consensus 282 ~-~~~~~~~dw~~ 293 (475)
. .+....+.|..
T Consensus 305 ~~~~~~~~~~~~~ 317 (333)
T cd06650 305 SEAEEVDFAGWLC 317 (333)
T ss_pred CccccccHHHHHH
Confidence 3 44455667753
No 51
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.5e-41 Score=333.72 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=203.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|++.++||+|+||.||+|.+..+++.||||.++.... ...+.+|+.+++.++| ++++.++.++..++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH--ANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC--CCcceEEEEEeeCCeEEEE
Confidence 4679999999999999999999999999999998764432 2356788998888875 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||+.++|.+++......+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCcc
Confidence 9999889999887666678999999999999999999999999999999999999 4778999999999976433221
Q ss_pred ccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV------- 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~------- 234 (475)
......+|..|+|||++.+ ..++.++|||||||++|||++|..||.+....+....+........
T Consensus 160 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 160 -------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred -------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhh
Confidence 1123467999999999876 4589999999999999999999999987544322222222111100
Q ss_pred ---------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 ---------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 ---------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..........++.++.++|.+||..||.+||++.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 284 (309)
T cd07872 233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284 (309)
T ss_pred cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence 0011112235688999999999999999999988874
No 52
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.7e-41 Score=328.58 Aligned_cols=253 Identities=20% Similarity=0.251 Sum_probs=200.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhC-CCCCcCeeEEeeEe-----CC
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQG-GSTGIPNLRWFGVE-----GD 77 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~-~~~~i~~l~~~~~~-----~~ 77 (475)
+|++.+.||+|+||.||+|.++.+++.||||.++.... .....+|..+++.+.. .|++|+.++.++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 59999999999999999999999999999998865432 2346678888887753 46999998877653 35
Q ss_pred EEEEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..+++||++.++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcccc
Confidence 679999999889999887543 348999999999999999999999999999999999999 4778999999999986
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc----
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---- 232 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~---- 232 (475)
+..... .....||..|+|||++.+..++.++|||||||++|||++|..||.+.........+......
T Consensus 158 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 158 YSCQMA--------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 229 (288)
T ss_pred ccCccc--------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChh
Confidence 643221 12357899999999999989999999999999999999999999764332222222211100
Q ss_pred ---------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ---------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ---------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
........+...++.++.+++.+||+.||++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 001122334456788999999999999999999988875
No 53
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.8e-42 Score=345.95 Aligned_cols=255 Identities=22% Similarity=0.307 Sum_probs=204.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.++||+|+||.||+|.+..+++.||||+++... ....+..|.+++..+.+ ++++.++.++.+++..|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS--PWIVKLYYSFQDEEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC--CCccchhhheecCCeEEE
Confidence 57999999999999999999999999999999986432 22346778888887765 999999988999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++... ..+++..++.|+.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.+...
T Consensus 79 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 79 VMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred EEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCccc
Confidence 99999 88999998754 679999999999999999999999999999999999999 57889999999999876543
Q ss_pred cccc----------------------ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 011882 161 ATHQ----------------------HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 218 (475)
Q Consensus 161 ~~~~----------------------~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~ 218 (475)
.... ...........||+.|+|||++.+..++.++|||||||+||||++|..||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 3000 000011234579999999999999999999999999999999999999998744
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCC-HHHHHH
Q 011882 219 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD-YAYLKR 272 (475)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt-~~~l~~ 272 (475)
....+.++.........+. ...+++++.++|..||. ||.+||+ +.++++
T Consensus 235 ---~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 235 ---LQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred ---HHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2333333333111111111 12368999999999997 9999999 888743
No 54
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-41 Score=339.65 Aligned_cols=245 Identities=19% Similarity=0.266 Sum_probs=195.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEc---cCCeEEEEEEeccCC------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
+|+++++||+|+||.||++++. .+++.||+|++.... ....+..|..++..+.+ |++++.++.++...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~~i~~~~~~~~~~~~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQ-SPFLVTLHYAFQTEAK 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccC-CCCcccEEEEEecCCE
Confidence 5999999999999999999864 478999999875421 12346678888888764 3899999988888999
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.+
T Consensus 80 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCccc
Confidence 99999999 8899998863 4569999999999999999999999999999999999999 46789999999999865
Q ss_pred cccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHH-HHHHHHhhcccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVS 235 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~ 235 (475)
...... ......||+.|+|||++.+.. ++.++|||||||+||||++|..||......... .....+.....
T Consensus 156 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~- 228 (332)
T cd05614 156 LSEEKE------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP- 228 (332)
T ss_pred cccCCC------ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC-
Confidence 433221 112457999999999998764 789999999999999999999999754332222 22222222111
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
.+...++..+.+++.+||..||++||++.
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 229 ----PFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 12345789999999999999999999544
No 55
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.5e-41 Score=343.75 Aligned_cols=268 Identities=19% Similarity=0.298 Sum_probs=205.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++++.||+|+||+||+|.+..+++.||||++.... ....+..|..++..+++ ++|+.++..+.+....|+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~--~~iv~~~~~~~~~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS--LWVVKMFYSFQDKLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCeEEE
Confidence 57999999999999999999999999999999986432 12346678888887765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||| +..+.+||+|||+++.+...
T Consensus 79 v~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 79 IMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred EEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccccc
Confidence 99999 8899999874 4579999999999999999999999999999999999999 46789999999999865432
Q ss_pred cccc-------ccc---------------------cccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCC
Q 011882 161 ATHQ-------HIP---------------------YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSL 212 (475)
Q Consensus 161 ~~~~-------~~~---------------------~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~ 212 (475)
.... ..+ .......+||+.|+|||++.+..++.++|||||||+||||++|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1100 000 001124589999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCC---CCCCHHHHHHHHHHHHHHcCCCCCCcc
Q 011882 213 PWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFD---DKPDYAYLKRLFRDLFIREGFQFDYVF 289 (475)
Q Consensus 213 Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~---~RPt~~~l~~~L~~l~~~~~~~~~~~~ 289 (475)
||.+.. ..+.+.++........++. ...+++++.++|.+++. ++. .||++++|+ ++ ++-...
T Consensus 235 Pf~~~~---~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~---~h-------p~f~~~ 299 (363)
T cd05628 235 PFCSET---PQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK---TN-------PFFEGV 299 (363)
T ss_pred CCCCCC---HHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh---CC-------CCCCCC
Confidence 997643 3344444443221111111 12357889999998664 444 457776663 22 333456
Q ss_pred cccccc
Q 011882 290 DWTILK 295 (475)
Q Consensus 290 dw~~~~ 295 (475)
+|....
T Consensus 300 ~~~~~~ 305 (363)
T cd05628 300 DWEHIR 305 (363)
T ss_pred CHHHHH
Confidence 777553
No 56
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.3e-41 Score=338.32 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=197.8
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+|++.+.||+|+||.||+|.+..+++.||||++..... ......|..++..+.+ |++++.+..++...+..|+|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGK-PPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-CCeEeeEEEEEecCCEEEEE
Confidence 58999999999999999999999999999998865421 1234556666665544 48888898888899999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 80 MEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCC
Confidence 9999 8899988864 4569999999999999999999999999999999999999 577899999999997543221
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+...... +
T Consensus 156 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~---~~~~~~~i~~~~~~-----~ 220 (323)
T cd05616 156 V-------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDELFQSIMEHNVA-----Y 220 (323)
T ss_pred C-------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC-----C
Confidence 1 1234679999999999999999999999999999999999999998743 33444444443321 2
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
+..++.++.+++.+||..+|++|++.
T Consensus 221 p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 221 PKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 35678999999999999999999985
No 57
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-42 Score=329.39 Aligned_cols=261 Identities=20% Similarity=0.233 Sum_probs=210.1
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEecc----CCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEe-----
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV----KTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVE----- 75 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~----~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~----- 75 (475)
+...|..++.||.|+||.|+.+.++.+|+.||||.+.. .....+..+|+++++.++| +||+.+.+....
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~H--eNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRH--ENIIGLLDIFRPPSRDK 97 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcC--CCcceEEeecccccccc
Confidence 45677888999999999999999999999999997652 2233567889999999985 888888766543
Q ss_pred CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 76 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 76 ~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
-...|+|+|+|+.+|..+++ .+..++.+.+..++.||+.||.|+|+.+|+||||||.|+|+ +.++.+||||||+|+
T Consensus 98 f~DvYiV~elMetDL~~iik-~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIK-SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLAR 173 (359)
T ss_pred cceeEEehhHHhhHHHHHHH-cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEecccccee
Confidence 45689999999999999998 34459999999999999999999999999999999999999 588889999999999
Q ss_pred cccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH------
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK------ 228 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~------ 228 (475)
......... ..+.++-|.+|.|||++.. ..|+.+.||||+||||.||++|+.-|.|.+.....+.+..
T Consensus 174 ~~~~~~~~~-----~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~ 248 (359)
T KOG0660|consen 174 YLDKFFEDG-----FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS 248 (359)
T ss_pred eccccCccc-----chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence 876431111 1245788999999998864 5699999999999999999999999988543322222211
Q ss_pred ------Hh-----------hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 229 ------IS-----------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 229 ------i~-----------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
+. ......+...+.++.++...+|+++||.+||.+|+|+++. |++.+.
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eA---L~hPYl 313 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEA---LAHPYL 313 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHH---hcChhh
Confidence 11 1223344566667888999999999999999999997766 555543
No 58
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.5e-41 Score=354.29 Aligned_cols=255 Identities=17% Similarity=0.220 Sum_probs=192.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-CchHHHHHHHHHHHHhCC----CCCcCeeEEeeE-eCCEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGG----STGIPNLRWFGV-EGDYN 79 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~~~~~E~~il~~l~~~----~~~i~~l~~~~~-~~~~~ 79 (475)
.++|+++++||+|+||.||+|.+..+++.||||+++... .......|+.+++.+.+. +.+++.+..++. .....
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 478999999999999999999999999999999986432 233467788888887652 234566655554 44678
Q ss_pred EEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCC-------------CCCc
Q 011882 80 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGR-------------RANQ 145 (475)
Q Consensus 80 ~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~-------------~~~~ 145 (475)
|+||+++|++|.+++.. ...+++..+..|+.||+.||+|||+ .|||||||||+||||..++ +...
T Consensus 208 ~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~ 286 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCR 286 (467)
T ss_pred EEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCce
Confidence 99999999999998874 3579999999999999999999998 5999999999999996322 1125
Q ss_pred EEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 011882 146 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 225 (475)
Q Consensus 146 vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~ 225 (475)
+||+|||++...... ....+||+.|+|||++.+..++.++|||||||+||||++|+.||.+.........
T Consensus 287 vkl~DfG~~~~~~~~----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 287 VRICDLGGCCDERHS----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred EEECCCCccccCccc----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999999988643221 2346899999999999999999999999999999999999999987543222222
Q ss_pred HHHHhhcccc---------------------------ccHHHHh-------cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 226 YEKISEKKVS---------------------------TSIEALC-------RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 226 ~~~i~~~~~~---------------------------~~~~~l~-------~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
+.++...... ..+..+. ....+.+.+||..||.+||++||++.+++
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 2211100000 0000000 00135678999999999999999988884
No 59
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-43 Score=323.54 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=219.1
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
++.+.|++.+.||+|.|+.||++.+..+|+.+|+|+++.+. ..+++.+|+.|.+.|+| |+|+.+.....+..+.
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH--P~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC--CcEeehhhhhccccee
Confidence 57788999999999999999999999999999999887653 45679999999999998 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|||+|++ |+.|..-+-. ..-+++..+-.+++||+++|.|+|.+||||||+||.|+|+...+..--+||+|||+|..+.
T Consensus 86 ylvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 9999999 7777544431 2358999999999999999999999999999999999999877777789999999999887
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
+.. ....+.||+.|||||++...+|+..+|||+.|||||-|+.|.+||.+ .+....|+.|....+..+-
T Consensus 165 ~g~--------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~---~~~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 165 DGE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYEQIKAGAYDYPS 233 (355)
T ss_pred Ccc--------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC---ccHHHHHHHHhccccCCCC
Confidence 322 23467999999999999999999999999999999999999999988 3456677888777765544
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
+. +..+.++.++|+.+||..||.+|.|+.|.
T Consensus 234 ~~-w~~is~~Ak~LvrrML~~dP~kRIta~EA 264 (355)
T KOG0033|consen 234 PE-WDTVTPEAKSLIRRMLTVNPKKRITADEA 264 (355)
T ss_pred cc-cCcCCHHHHHHHHHHhccChhhhccHHHH
Confidence 33 36788999999999999999999997765
No 60
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.9e-41 Score=345.47 Aligned_cols=260 Identities=19% Similarity=0.285 Sum_probs=203.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|+++++||+|+||.||+|++..+++.||||++.... ....+..|+.++..+.| ++|+.++.++..++..|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN--PWVVKLYYSFQDENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--CCCcceEEEEEcCCeEEE
Confidence 57999999999999999999999999999999986432 12346678899888864 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||| +.++.+||+|||+++.+...
T Consensus 79 v~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 79 IMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred EECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecccc
Confidence 99999 8899999874 4569999999999999999999999999999999999999 57889999999999865432
Q ss_pred cccccc-----------------c---------c-----ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc
Q 011882 161 ATHQHI-----------------P---------Y-----RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR 209 (475)
Q Consensus 161 ~~~~~~-----------------~---------~-----~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt 209 (475)
...... + + ......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 110000 0 0 00113479999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 210 GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 210 G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
|..||.+.. ..+.+..+.........+. ...+++++.++|.+|+. +|.+|++...+.++|.+.
T Consensus 235 G~~Pf~~~~---~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 235 GYPPFCSDN---PQETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred CCCCCCCCC---HHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 999997643 2333333332211111110 12468899999999996 999999843344445443
No 61
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.2e-41 Score=336.70 Aligned_cols=259 Identities=18% Similarity=0.291 Sum_probs=205.2
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
..++|+++++||+|+||.||++.+..++..||+|++..... ...+.+|+++++.++| ++++.++.++...+..++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS--PYIVGFYGAFYSDGEISI 80 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC--CCCCeEEEEEEECCEEEE
Confidence 35789999999999999999999999999999999876532 2357889999988875 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||||+ +++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||++..+..
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 81 CMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred EeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCcccccccc
Confidence 99999 8899999874 34689999999999999999999986 69999999999999 4678899999999986543
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH-----------
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK----------- 228 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~----------- 228 (475)
.. .....||..|+|||++.+..++.++|||||||+||||++|+.||...........+..
T Consensus 157 ~~---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (331)
T cd06649 157 SM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPH 227 (331)
T ss_pred cc---------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCcc
Confidence 22 1345799999999999999999999999999999999999999965332111000000
Q ss_pred ----------------------------HhhccccccHHHH-hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 229 ----------------------------ISEKKVSTSIEAL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 229 ----------------------------i~~~~~~~~~~~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
..........+.. ...+++++.+||.+||.+||++||++.+| |++.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el---l~h~~~ 304 (331)
T cd06649 228 SISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML---MNHTFI 304 (331)
T ss_pred ccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH---hcChHH
Confidence 0000000000000 12367899999999999999999999888 445554
Q ss_pred Hc
Q 011882 280 RE 281 (475)
Q Consensus 280 ~~ 281 (475)
+.
T Consensus 305 ~~ 306 (331)
T cd06649 305 KR 306 (331)
T ss_pred hh
Confidence 43
No 62
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=339.96 Aligned_cols=242 Identities=21% Similarity=0.295 Sum_probs=201.4
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCC-eEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~-~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
..++|++.++||+|+||.||+|.+..++ ..||||++.... ....+..|..++..+.| ++|+.++.++.....
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH--PFCVNLYGSFKDESY 105 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC--CCCcceEEEEEeCCE
Confidence 3467999999999999999999876655 689999875321 23456779999888875 999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.|+||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeec
Confidence 99999999 8899999874 4579999999999999999999999999999999999999 57889999999999865
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
... .....||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ....+..+......
T Consensus 182 ~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~---~~~~~~~i~~~~~~-- 246 (340)
T PTZ00426 182 DTR----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE---PLLIYQKILEGIIY-- 246 (340)
T ss_pred CCC----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC---HHHHHHHHhcCCCC--
Confidence 432 124579999999999999889999999999999999999999998643 33344444433221
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKP-----DYAYL 270 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l 270 (475)
+...+++++.+++.+||+.||++|+ +++++
T Consensus 247 ---~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 281 (340)
T PTZ00426 247 ---FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNV 281 (340)
T ss_pred ---CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHH
Confidence 2355788999999999999999996 55554
No 63
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9e-41 Score=334.31 Aligned_cols=236 Identities=21% Similarity=0.271 Sum_probs=192.4
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||||+++... .......|..++..+. .|++|+.++.++...+..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAW-EHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhcc-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 47999999999999999999999999886432 1223455666655443 4599999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~---- 151 (316)
T cd05592 80 GGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEG---- 151 (316)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCC----
Confidence 8899988874 4579999999999999999999999999999999999999 5778999999999976433221
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~~~i~~~~~-----~~~~~~~ 220 (316)
T cd05592 152 ---KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELFDSILNDRP-----HFPRWIS 220 (316)
T ss_pred ---ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCC-----CCCCCCC
Confidence 12346799999999999999999999999999999999999999987432 333333332221 1234578
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~ 268 (475)
.++.+++..||..||++||++.
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCCh
Confidence 8999999999999999999864
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4e-41 Score=338.69 Aligned_cols=238 Identities=19% Similarity=0.284 Sum_probs=195.1
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||++.+..+++.||||++.... ....+..|..+++.+.| ++++.+..++...+..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH--PFLTSLKYSFQTKDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--CCCcceEEEEEcCCEEEEEEeCCC
Confidence 47999999999999999999999999986532 12346678888877765 89999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+.+.. ...+++.+++.++.||+.||+|||++||+||||||+|||| +..+.+||+|||+++.......
T Consensus 79 ~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~---- 150 (328)
T cd05593 79 GGELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAA---- 150 (328)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccc----
Confidence 8899888763 4579999999999999999999999999999999999999 5778999999999975432211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ..+.+..+..... .+...++
T Consensus 151 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~---~~~~~~~~~~~~~-----~~p~~~~ 219 (328)
T cd05593 151 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELILMEDI-----KFPRTLS 219 (328)
T ss_pred ---ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC---HHHHHHHhccCCc-----cCCCCCC
Confidence 1134579999999999999999999999999999999999999997643 2233333322221 2345678
Q ss_pred HHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKP-----DYAYLK 271 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RP-----t~~~l~ 271 (475)
.++.++|.+||..||++|+ ++.+++
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il 249 (328)
T cd05593 220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIM 249 (328)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence 9999999999999999997 666653
No 65
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6e-41 Score=343.58 Aligned_cols=256 Identities=21% Similarity=0.319 Sum_probs=203.2
Q ss_pred CceEEeeeEeeeCceeEEEEEE-----ccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTN-----IQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~-----~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
++|++.++||+|+||.||+|.+ ..++..||||+++.... ...+.+|+.++..+.. |+||+.+++++...+.
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~-HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-HINIVNLLGACTVGGP 113 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcC-CcceeeeeeeeccCCc
Confidence 4799999999999999999974 34567899999865432 2357789999988843 4999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcC-----------------------------------------------------------
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS----------------------------------------------------------- 98 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~----------------------------------------------------------- 98 (475)
.++||||+ +++|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999 899998886421
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 99 ---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 99 ---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
..+++..++.|+.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++.+......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcccc
Confidence 1478889999999999999999999999999999999994 6778999999999866443211
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
.......++..|+|||++.+..++.++|||||||+||||++ |..||....... ..+..+... ... ...
T Consensus 271 -----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~-~~~---~~~ 339 (375)
T cd05104 271 -----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKEG-YRM---LSP 339 (375)
T ss_pred -----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHhC-ccC---CCC
Confidence 11223345678999999999999999999999999999997 899997653321 112222211 111 112
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
...|.++.+|+.+||..||++||++.+|++.|++.
T Consensus 340 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 34678999999999999999999999999998864
No 66
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-42 Score=337.63 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=203.7
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----------------hHHHHHHHHHHHHhCCCCCc
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----------------PQLQYEAKLYKILQGGSTGI 66 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----------------~~~~~E~~il~~l~~~~~~i 66 (475)
....|+|++++.||+|.||.|-+|.+..+++.||||++.+.... +...+|+.+++.|.| +||
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H--~nV 170 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH--PNV 170 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC--cCe
Confidence 35678999999999999999999999999999999998654321 357889999999987 999
Q ss_pred CeeEEeeE--eCCEEEEEEEcC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC
Q 011882 67 PNLRWFGV--EGDYNVLVIDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 142 (475)
Q Consensus 67 ~~l~~~~~--~~~~~~lvme~~-g~sL~~ll~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 142 (475)
++++.+-. ..+..|||+||| .|.+...- +... +++.+++.|+.+++.||+|||.+|||||||||+|+||+ .
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~ 245 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---S 245 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---C
Confidence 99988866 447889999999 44443221 2344 99999999999999999999999999999999999995 7
Q ss_pred CCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCC----CCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 011882 143 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLK 218 (475)
Q Consensus 143 ~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~----~s~ksDIwSlG~iL~elltG~~Pf~~~~ 218 (475)
.++|||+|||.+..+......... .......||+.|+|||...+.. .+.+.||||+||+||.|+.|++||.+
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d--~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~-- 321 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSD--DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD-- 321 (576)
T ss_pred CCcEEeeccceeeecccCCccccH--HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc--
Confidence 799999999999876332111100 0112358999999999988733 36889999999999999999999977
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 219 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
....+.+.+|....+..+.. ..+.+.+++||.++|.+||+.|.+..+|.
T Consensus 322 -~~~~~l~~KIvn~pL~fP~~---pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 322 -DFELELFDKIVNDPLEFPEN---PEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred -chHHHHHHHHhcCcccCCCc---ccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 45567777877766543221 23568899999999999999999977664
No 67
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.5e-41 Score=342.32 Aligned_cols=246 Identities=20% Similarity=0.258 Sum_probs=196.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|+++++||+|+||.||+|++..+++.||||++...... ..+.+|+++++.++| ++|+.++.++...+..++|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH--PNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC--CCcceeeeEeccCCeEEEE
Confidence 35789999999999999999999999999999998654322 357789999988875 8999999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|.+. ..+.+..+..|+.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.+....
T Consensus 151 ~e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 151 LEFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceeccccc
Confidence 9999 7787542 235678889999999999999999999999999999999 477899999999998764322
Q ss_pred cccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
. ......||..|+|||++.. ...+.++|||||||+||||++|+.||......+.......+.....
T Consensus 223 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-- 293 (353)
T PLN00034 223 D-------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-- 293 (353)
T ss_pred c-------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC--
Confidence 1 1234579999999998743 2346799999999999999999999975433332222222221111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
......++.++.+||.+||..||++||++.+|++
T Consensus 294 --~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 294 --PEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred --CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1123467899999999999999999999887743
No 68
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.5e-41 Score=340.21 Aligned_cols=252 Identities=20% Similarity=0.224 Sum_probs=195.4
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--- 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--- 76 (475)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.| ++|+.++.++...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH--KNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCC--CCEeeeeeeeccCCCc
Confidence 35689999999999999999999999999999999886432 22346678888887765 8999987776533
Q ss_pred ---CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 ---DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ---~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
...|+||||++++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCC
Confidence 3579999999888887764 358999999999999999999999999999999999999 5788999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK- 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~- 232 (475)
++....... .....||..|+|||++.+..++.++|||||||++|+|++|..||.+.........+......
T Consensus 170 a~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 241 (359)
T cd07876 170 ARTACTNFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 241 (359)
T ss_pred ccccccCcc--------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 975433211 13457899999999999999999999999999999999999999875332111111100000
Q ss_pred ------------------c--c-cccHHH------------HhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ------------------K--V-STSIEA------------LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ------------------~--~-~~~~~~------------l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. . ...... .....+.++.+||.+||..||++||++.+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 242 SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred cHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 0 0 000000 0112357789999999999999999988774
No 69
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-42 Score=344.67 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=202.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
+..|+++++||+||.+.||++.. .+.+.||+|.+...... ..+..|+.+|..|++. ..|+.+++|...+++.||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~-~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH-DKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC-ceEEEEeeeeccCceEEE
Confidence 56699999999999999999985 44566777754443332 3478999999999987 889999999999999999
Q ss_pred EEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 82 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 82 vme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||||-..+|..+++........-.+..+..||+.|+.++|.+||||.||||.|||| -.|.+||+|||+|..+....
T Consensus 438 vmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 438 VMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred EeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeeechhcccCccc
Confidence 99999999999998766666656889999999999999999999999999999999 47899999999999887655
Q ss_pred cccccccccCCCCccCccccccccccCCC-----------CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIE-----------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 230 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-----------~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~ 230 (475)
+.. ....-+||+.||+||.+.... .++++||||||||||+|+.|+.||.... ....++..|.
T Consensus 514 TsI-----~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~ 586 (677)
T KOG0596|consen 514 TSI-----VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAIT 586 (677)
T ss_pred cce-----eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhc
Confidence 432 123458999999999987543 4689999999999999999999997642 2334455555
Q ss_pred hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 231 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 231 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
........+.+.. +.++.++++.||.+||++||++.+|+
T Consensus 587 ~P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 587 DPNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred CCCccccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHh
Confidence 4433333333322 23499999999999999999987773
No 70
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-42 Score=344.05 Aligned_cols=249 Identities=21% Similarity=0.242 Sum_probs=216.0
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE-EE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEGDY-NV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~-~~ 80 (475)
.++|.++++||.|+||.+++++++..++.||+|.++...... ....|..++..++| |+|+.+...+++++. .+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~h--P~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLH--PNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccC--CCeeeeccchhcCCceEE
Confidence 468999999999999999999999999999999987765332 46789999998776 999999888877766 99
Q ss_pred EEEEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|||+|| ||+|.+++...+ ..|+++.++.|+.||+.||.|||+++|+|||||+.||+++ +++.|||.|||+|+.+.
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILN 157 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcC
Confidence 999999 999999998665 5599999999999999999999999999999999999995 77888999999999887
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.... ...++.||+.||+||.+.+.+|+.|+|||||||++|||++-+.+|... +....+.+|.....
T Consensus 158 ~~~~-------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~---~m~~Li~ki~~~~~---- 223 (426)
T KOG0589|consen 158 PEDS-------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS---NMSELILKINRGLY---- 223 (426)
T ss_pred Cchh-------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc---chHHHHHHHhhccC----
Confidence 6542 235679999999999999999999999999999999999999999774 44555555555443
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 273 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 273 (475)
..+...++.+++.+|..|+..+|+.||++.+|+..
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 23456788999999999999999999999998654
No 71
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-41 Score=341.52 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=200.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.++||+|+||.||+|.+..+++.||||+++.... ...+..|..++..+.+ ++++.+..++...+..|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~--~~i~~~~~~~~~~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS--PWIPQLQYAFQDKDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--CCCcceeeEEecCCeEEE
Confidence 479999999999999999999999999999999875422 2346677777776654 899999988888999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||| +..+.+||+|||++..+...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCC
Confidence 99999 899999998766789999999999999999999999999999999999999 57889999999999876543
Q ss_pred ccccccccccCCCCccCcccccccccc------CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHL------GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~------g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
... ......||+.|+|||++. +..++.++|||||||+||||++|..||..... ...+..+.....
T Consensus 156 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~~i~~~~~ 226 (330)
T cd05601 156 KMV------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS---AKTYNNIMNFQR 226 (330)
T ss_pred Cce------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH---HHHHHHHHcCCC
Confidence 221 112347899999999987 45678999999999999999999999976432 333344332211
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
....+ ....++.++.+|+..||. +|.+||++.++
T Consensus 227 ~~~~~-~~~~~~~~~~~li~~ll~-~p~~R~t~~~l 260 (330)
T cd05601 227 FLKFP-EDPKVSSDFLDLIQSLLC-GQKERLGYEGL 260 (330)
T ss_pred ccCCC-CCCCCCHHHHHHHHHHcc-ChhhCCCHHHH
Confidence 11111 013468899999999998 99999998766
No 72
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-41 Score=330.73 Aligned_cols=269 Identities=22% Similarity=0.338 Sum_probs=219.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
+.|+++++||.|.-|+||+|+...++..+|+|++.... +..+.+.|.+||..+.| |.++.++...+..++.|+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH--PFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH--PFLPTLYASFETDKYSCL 154 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC--CccchhhheeeccceeEE
Confidence 56899999999999999999999999999999987543 23457789999999987 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 82 VIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||||| ||+|..+++... +.|++..+..++.+|+.||+|||-.|||.|||||+|||| .++|+|.|+||.|+.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCC
Confidence 99999 999999998654 459999999999999999999999999999999999999 6899999999999875421
Q ss_pred cccc-------------------------------cc-----------------cc-cccCCCCccCccccccccccCCC
Q 011882 160 TATH-------------------------------QH-----------------IP-YRENKNLTGTARYASMNTHLGIE 190 (475)
Q Consensus 160 ~~~~-------------------------------~~-----------------~~-~~~~~~~~GT~~Y~APE~~~g~~ 190 (475)
..+. .. .| -.....++||-.|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0000 00 00 01235688999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCC----
Q 011882 191 QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD---- 266 (475)
Q Consensus 191 ~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt---- 266 (475)
.+.++|+|+||++||||+.|..||.|.. ..+.+.+|....+..+-. ..++...++||+++|.+||.+|..
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~---~~~Tl~NIv~~~l~Fp~~---~~vs~~akDLIr~LLvKdP~kRlg~~rG 385 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSN---NKETLRNIVGQPLKFPEE---PEVSSAAKDLIRKLLVKDPSKRLGSKRG 385 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCC---chhhHHHHhcCCCcCCCC---CcchhHHHHHHHHHhccChhhhhccccc
Confidence 9999999999999999999999999853 456666666554432111 245689999999999999999987
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011882 267 YAYLKRLFRDLFIREGFQFDYVFDWTILKY 296 (475)
Q Consensus 267 ~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 296 (475)
++||.+ -.|..-++|.....
T Consensus 386 A~eIK~----------HpFF~gVnWaLir~ 405 (459)
T KOG0610|consen 386 AAEIKR----------HPFFEGVNWALIRC 405 (459)
T ss_pred hHHhhc----------CccccCCChhheec
Confidence 444432 24556678986544
No 73
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.7e-41 Score=344.95 Aligned_cols=253 Identities=22% Similarity=0.265 Sum_probs=198.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|+++++||+|+||.||+|++..+++.||||++.... ....+..|++++..+.| ++|+.++..+.+++..|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~~l 78 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN--EWVVKLYYSFQDKDNLYF 78 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC--CCcceEEEEEEcCCEEEE
Confidence 47999999999999999999999999999999875421 23457789999988876 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||| +..+.+||+|||+|..+...
T Consensus 79 v~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 79 VMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCcccccc
Confidence 99999 8999999874 4568999999999999999999999999999999999999 57789999999998644211
Q ss_pred ccccc------------------------------------cccccCCCCccCccccccccccCCCCCCchhHHHHHHHH
Q 011882 161 ATHQH------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVL 204 (475)
Q Consensus 161 ~~~~~------------------------------------~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL 204 (475)
..... ........++||+.|+|||++.+..++.++|||||||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00000 000011245799999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCC---CHHHH
Q 011882 205 MYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP---DYAYL 270 (475)
Q Consensus 205 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP---t~~~l 270 (475)
|||++|..||.+... ......+.........+ ....+++++.++|.+|+ .+|.+|+ ++.++
T Consensus 235 yell~G~~Pf~~~~~---~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 235 YEMLVGQPPFLADTP---AETQLKVINWETTLHIP-SQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eehhhCCCCCCCCCH---HHHHHHHhccCccccCC-CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 999999999987432 22222222211111110 11357889999999977 5999999 65555
No 74
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.8e-41 Score=344.34 Aligned_cols=255 Identities=21% Similarity=0.245 Sum_probs=198.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
..|+++++||+|+||+||+|.+..+++.||||++..... ...+..|..+++.+.+ ++|+.++.++.+.+..|+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~~iv~l~~~~~~~~~~~l 78 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN--EWVVKLYYSFQDKDNLYF 78 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC--CCeeeeEEEEecCCEEEE
Confidence 369999999999999999999999999999999865321 2346778888888765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||| +..+.+||+|||+++.+...
T Consensus 79 v~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 79 VMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCcccccc
Confidence 99999 8899999874 4569999999999999999999999999999999999999 47789999999998754211
Q ss_pred cccccc----------------------------------------ccccCCCCccCccccccccccCCCCCCchhHHHH
Q 011882 161 ATHQHI----------------------------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 200 (475)
Q Consensus 161 ~~~~~~----------------------------------------~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSl 200 (475)
...... .......++||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 100000 0001134679999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHh--cCCCCCCCCHHHHH
Q 011882 201 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCR--SLRFDDKPDYAYLK 271 (475)
Q Consensus 201 G~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl--~~dp~~RPt~~~l~ 271 (475)
||+||||++|..||..... .+....+........++ ....+++++.++|.+|+ ..++..||++.+|+
T Consensus 235 G~il~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~-~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTP---TETQLKVINWENTLHIP-PQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred hhHHHHHHhCCCCCcCCCH---HHHHHHHHccccccCCC-CCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 9999999999999976432 22222222111111111 01246889999999954 45555699988774
No 75
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4e-41 Score=344.96 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=197.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|+++++||+|+||.||+|.+..+++.||||++.... ....+..|.+++..+.| ++|+.++.++.+..+.|+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~~~~~~~~~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS--PWVVSLYYSFQDAQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC--CCcceEEEEEEcCCeeEE
Confidence 57999999999999999999999999999999875432 12346778888887765 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||| +..+.+||+|||+++.+...
T Consensus 79 v~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 79 IMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeecccccccccc
Confidence 99999 8999999874 4579999999999999999999999999999999999999 47789999999999754321
Q ss_pred cccccc-------cc---------------------------------ccCCCCccCccccccccccCCCCCCchhHHHH
Q 011882 161 ATHQHI-------PY---------------------------------RENKNLTGTARYASMNTHLGIEQSRRDDLESL 200 (475)
Q Consensus 161 ~~~~~~-------~~---------------------------------~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSl 200 (475)
...... .. ......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 100000 00 00113579999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCC---CHHHH
Q 011882 201 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP---DYAYL 270 (475)
Q Consensus 201 G~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP---t~~~l 270 (475)
||+||||++|..||.+... ...+..+.........+. ...++.++.++|.+|+. +|.+|+ ++.++
T Consensus 235 Gvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 235 GAIMFECLIGWPPFCSENS---HETYRKIINWRETLYFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred chhhhhhhcCCCCCCCCCH---HHHHHHHHccCCccCCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 9999999999999976432 333333332111111100 12467899999999997 777765 66555
No 76
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.6e-40 Score=333.57 Aligned_cols=241 Identities=20% Similarity=0.262 Sum_probs=198.5
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|..++..+.+ +++++.+..++...+..|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDK-PPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-CCchhheeeEEecCCEEEEE
Confidence 4889999999999999999999999999999886432 11235667777766654 47888888888888999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ |++|.+++.. ...+++.+++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 80 MEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred EcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCC
Confidence 9999 8899998864 4569999999999999999999999999999999999999 577899999999997543221
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+...... +
T Consensus 156 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~~~i~~~~~~-----~ 220 (323)
T cd05615 156 V-------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED---EDELFQSIMEHNVS-----Y 220 (323)
T ss_pred c-------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC-----C
Confidence 1 1234579999999999999999999999999999999999999998743 33444444443322 2
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
...++.++.+++.+||..+|.+|++..
T Consensus 221 p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 221 PKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 346788999999999999999999854
No 77
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.8e-41 Score=336.33 Aligned_cols=256 Identities=21% Similarity=0.255 Sum_probs=199.5
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHH-HHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAK-LYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~-il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
+.||+|+||.||+|++..+++.||+|++..... ...+..|.. +++.+ .|++|+.++.++...+..|+||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--~h~~Iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--KHPFLVGLHFSFQTADKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC--CCCCCCceeEEEEcCCeEEEEEeCC
Confidence 479999999999999999999999999864321 112333333 23334 4499999999999999999999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~--- 151 (325)
T cd05602 79 NGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNG--- 151 (325)
T ss_pred CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCC---
Confidence 8899998874 4568999999999999999999999999999999999999 5778999999999975433221
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+...... +...+
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~ 219 (325)
T cd05602 152 ----TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAEMYDNILNKPLQ-----LKPNI 219 (325)
T ss_pred ----CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC---HHHHHHHHHhCCcC-----CCCCC
Confidence 1234679999999999999999999999999999999999999997643 33444444433221 23467
Q ss_pred hHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011882 246 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 295 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 295 (475)
+.++.+++.+||+.||.+||++.+.. .++.. ..+...++|+...
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~---~~i~~---~~~~~~~~~~~~~ 263 (325)
T cd05602 220 TNSARHLLEGLLQKDRTKRLGAKDDF---MEIKN---HIFFSPINWDDLI 263 (325)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCH---HHHhc---CcccCCCCHHHHH
Confidence 89999999999999999999976432 22221 2234557787654
No 78
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.2e-40 Score=328.24 Aligned_cols=242 Identities=20% Similarity=0.237 Sum_probs=197.1
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.|++.++||+|+||.||++.+..+++.||||++..... ...+..|+.+++.+++ ++++.+...+..++..++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC--CCEeeeeeeecCCCeEEEE
Confidence 48999999999999999999999999999998764321 1235678888888865 8999999888888999999
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++..+..++.||+.||.|||+.||+||||||+|||+ ++.+.++|+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCC
Confidence 9999 88999887643 3469999999999999999999999999999999999999 46789999999999865432
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.......+.+...... ....
T Consensus 156 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~ 223 (285)
T cd05605 156 ET--------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----DQEE 223 (285)
T ss_pred Cc--------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----cccc
Confidence 21 12347899999999999989999999999999999999999999875432222222221111 1112
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCC
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt 266 (475)
+...++..+.+|+.+||..||++||+
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05605 224 YSEKFSEAARSICRQLLTKDPGFRLG 249 (285)
T ss_pred cCcccCHHHHHHHHHHccCCHHHhcC
Confidence 33457899999999999999999993
No 79
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-40 Score=322.88 Aligned_cols=255 Identities=20% Similarity=0.349 Sum_probs=209.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
..+|.+.++||+|+||.||+|.+..+++.||+|++..... ...+..|+++++.+.| ++++.++.++......+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--PNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC--CChhheEEEEcCCCCcEEEEE
Confidence 4569999999999999999999999999999998765432 2457789999998865 899999999988999999999
Q ss_pred cC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ ++.+.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCcccccccccee
Confidence 99 889999987543 358999999999999999999999999999999999999 4778999999999987654321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+....+... .. ...
T Consensus 160 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~~~~~-~~---~~~ 226 (263)
T cd05052 160 T------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYELLEKG-YR---MER 226 (263)
T ss_pred e------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCC-CC---CCC
Confidence 1 1122344678999999999999999999999999999998 9999976432 2222222221 11 123
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
...+|.++.+++.+||..+|++||++.++.+.|+.+|
T Consensus 227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 4568899999999999999999999999999998764
No 80
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.2e-40 Score=333.30 Aligned_cols=236 Identities=20% Similarity=0.262 Sum_probs=191.9
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
++||+|+||.||+|.++.+++.||||+++... .......|..++..+. .|++++.++.++...+..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW-ENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-CCCCccCeeEEEEeCCEEEEEECCCC
Confidence 47999999999999999999999999886532 2234556666665443 3499999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (316)
T cd05620 80 GGDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDN---- 151 (316)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCC----
Confidence 8899988874 4579999999999999999999999999999999999999 5778999999999875322111
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||..|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~---~~~~~~~~~~~~~-----~~~~~~~ 220 (316)
T cd05620 152 ---RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD---EDELFESIRVDTP-----HYPRWIT 220 (316)
T ss_pred ---ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCC-----CCCCCCC
Confidence 1234679999999999999999999999999999999999999997643 2333333322211 1234578
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~ 268 (475)
.++.+++.+||..||++||++.
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCCh
Confidence 8999999999999999999963
No 81
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.2e-41 Score=327.56 Aligned_cols=254 Identities=23% Similarity=0.323 Sum_probs=206.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCC-----eEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN-----EEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~-----~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+...... ..+..|+.++..+.| ++++.+..++....
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~ 81 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH--PNIVCLLGVCTKEQ 81 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC--cccceEEEEEcCCC
Confidence 467999999999999999999976554 68999987654322 346778888888765 89999999988888
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 141 (475)
..+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||+ +
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~---~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---G 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---c
Confidence 999999999 889999987532 458899999999999999999999999999999999999 4
Q ss_pred CCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 011882 142 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAG 220 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~ 220 (475)
+++.+||+|||+++....... +.......++..|+|||.+.+..++.++|||||||+||||++ |..||.+...
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~- 232 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN- 232 (283)
T ss_pred CCCcEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 678899999999986543221 111233467889999999998899999999999999999998 9999987543
Q ss_pred CHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 221 TKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
.+.+..+...... .....+|.++.+|+.+||+.||.+||++.+|++.|+.
T Consensus 233 --~~~~~~i~~~~~~----~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 --QEVIEMIRSRQLL----PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHHHcCCcC----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 2333333332221 2345789999999999999999999999999988864
No 82
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-42 Score=331.79 Aligned_cols=245 Identities=22% Similarity=0.350 Sum_probs=215.4
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch-----HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-----QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~-----~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
+..+|++.+.||+|.||.|-+|.....|+.||||.++.+.... .+.+|++|+..|+| |||+.++.+++..+..
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH--PhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH--PHIIQIYEVFENKDKI 128 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC--CceeehhhhhcCCceE
Confidence 4568999999999999999999998999999999877654332 47889999999987 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
+|||||. +|.|++++..+ +.+++.++..|++||..|+.|+|.++++|||||.+|||| |.++++||+||||+..|.
T Consensus 129 vivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhc
Confidence 9999999 99999999864 579999999999999999999999999999999999999 689999999999998887
Q ss_pred ccccccccccccCCCCccCccccccccccCCCC-CCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~-s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
+... ..+|||++.|++||++.|.+| ++.+|-||||++||-|+.|.+||+|. +.+..+.+|....+..
T Consensus 205 ~~kf--------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~---Dhk~lvrQIs~GaYrE- 272 (668)
T KOG0611|consen 205 DKKF--------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR---DHKRLVRQISRGAYRE- 272 (668)
T ss_pred cccH--------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc---hHHHHHHHhhcccccC-
Confidence 6543 357899999999999999998 79999999999999999999999984 4455566666555433
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..-|....-||..||..+|+.|.|+.+|..
T Consensus 273 -----P~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 273 -----PETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -----CCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 345778899999999999999999887753
No 83
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=328.73 Aligned_cols=289 Identities=43% Similarity=0.701 Sum_probs=243.2
Q ss_pred ccCC-ceEEeeeEeeeCceeEEEEEEccCC-eEEEEEEeccCCCc--hHHHHHHHHHHHHhC--CCCCcCeeEEee-EeC
Q 011882 4 RVGN-KFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLENVKTKH--PQLQYEAKLYKILQG--GSTGIPNLRWFG-VEG 76 (475)
Q Consensus 4 ~i~~-~y~l~~~LG~G~fG~Vy~a~~~~~~-~~vAvKi~~~~~~~--~~~~~E~~il~~l~~--~~~~i~~l~~~~-~~~ 76 (475)
.... +|++.++||+|+||.||+|.+..++ ..+|+|++...... ..+..|..++..+.. ...+++.+.+.+ ...
T Consensus 14 ~~~~~~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~ 93 (322)
T KOG1164|consen 14 DKVNTRYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE 93 (322)
T ss_pred cccccceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC
Confidence 3445 8999999999999999999987774 68999998765333 379999999999984 347899999999 588
Q ss_pred CEEEEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC--CCCcEEEeecCC
Q 011882 77 DYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGL 153 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGl 153 (475)
.+.|+||+++|.+|.++..... +.|+..+++.|+.|++.+|++||+.|+|||||||+|++++... ....++|+|||+
T Consensus 94 ~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 94 DFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred ceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 8999999999999999997555 7899999999999999999999999999999999999998543 226799999999
Q ss_pred cc--ccccccccccccccc-CCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011882 154 AK--RYRDTATHQHIPYRE-NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 230 (475)
Q Consensus 154 A~--~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~ 230 (475)
|+ .+.......+.+.+. ...+.||..|++++++.+.+.++++|+|||++++.||+.|.+||.+.........+.+..
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99 444333322344444 346779999999999999999999999999999999999999998877665555555554
Q ss_pred hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011882 231 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 295 (475)
Q Consensus 231 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 295 (475)
....... .+...|.++..++..+-..++.++|++..+..+|++.+.+.+...+.++||+...
T Consensus 254 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~ 315 (322)
T KOG1164|consen 254 RKLLTDR---FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKL 315 (322)
T ss_pred hhhcccc---ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccccc
Confidence 4443332 4455688999999999999999999999999999999999999999999999754
No 84
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.4e-40 Score=334.99 Aligned_cols=250 Identities=22% Similarity=0.264 Sum_probs=197.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++++.||+|+||.||++.+..+++.||||+++... ....+..|..++..+.+ ++|+.++.++..++..|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR--RWITNLHYAFQDENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC--CCCCceEEEEecCCeEEE
Confidence 57999999999999999999999999999999986421 22346677777776654 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++......+++..+..++.||+.||+|||++||+||||||+|||| +.++.+||+|||++..+...
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCC
Confidence 99999 999999998666779999999999999999999999999999999999999 47789999999999765443
Q ss_pred ccccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
... ......||+.|+|||++.+ ..++.++|||||||+||||++|..||.+.. ..+.+..+......
T Consensus 156 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~---~~~~~~~i~~~~~~ 226 (331)
T cd05597 156 GTV------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHKEH 226 (331)
T ss_pred CCc------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCc
Confidence 221 1123469999999999874 347889999999999999999999997632 33444444332221
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCC--CCCHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYL 270 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l 270 (475)
..++.....++.++.+++.+|+..+++. |+++.++
T Consensus 227 ~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~ 263 (331)
T cd05597 227 FQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDF 263 (331)
T ss_pred ccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 2222223457899999999988753332 5665444
No 85
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=352.71 Aligned_cols=262 Identities=19% Similarity=0.273 Sum_probs=206.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEE-eeE-----e-CC
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRW-FGV-----E-GD 77 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~-~~~-----~-~~ 77 (475)
.+++|.+.|.+|||+.||+|.+...+..||+|.+-..... ..+.+|+.+++.|.++ +||+.+++ ... . ..
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh-~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGH-KNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCC-CceeeEeccccccccCCCcee
Confidence 4688999999999999999999888899999976544322 3578999999999975 99999877 222 1 24
Q ss_pred EEEEEEEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 78 YNVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
..+|.|||| |++|-++++.. ...|++.++++|+.|+++|+.+||... |||||||-+||||+ .++.+||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCcccc
Confidence 568999999 68999999743 455999999999999999999999988 99999999999994 788999999999
Q ss_pred cccccccc-ccccccc-ccCCCCccCccccccccc---cCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q 011882 154 AKRYRDTA-THQHIPY-RENKNLTGTARYASMNTH---LGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 154 A~~~~~~~-~~~~~~~-~~~~~~~GT~~Y~APE~~---~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~ 228 (475)
|....... ....+.+ ........|+.|.|||++ .|.+++.|+|||+|||+||.|+....||.+... ..
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------la 265 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------LA 265 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------ee
Confidence 97543322 1111111 111223569999999987 477899999999999999999999999987422 12
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
|...++..+. ...++..|++||..||+.||++||++.+++..+.++..+..
T Consensus 266 Ilng~Y~~P~---~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 266 ILNGNYSFPP---FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred EEeccccCCC---CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 3333332221 14678999999999999999999999999888877765544
No 86
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.4e-40 Score=324.33 Aligned_cols=261 Identities=20% Similarity=0.256 Sum_probs=206.4
Q ss_pred CCCccCCceEEeeeEeeeCceeEEEEEEccCCe----EEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEee
Q 011882 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFG 73 (475)
Q Consensus 1 m~~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~----~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~ 73 (475)
|+.+..++|+++++||+|+||+||+|.+..+++ .||||+++..... ..+..|..++..+.+ ++++.+.+++
T Consensus 1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~ 78 (279)
T cd05109 1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS--PYVCRLLGIC 78 (279)
T ss_pred CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC--CCCceEEEEE
Confidence 677788999999999999999999999877776 4899987654332 345667777776654 8898888877
Q ss_pred EeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 74 VEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 74 ~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
... ..+++|+|+ +++|.+++......+++..++.++.||+.||.|||+++|+||||||+|||++ +.+.+||+|||
T Consensus 79 ~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG 154 (279)
T cd05109 79 LTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFG 154 (279)
T ss_pred cCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCC
Confidence 654 467888888 8899999876566799999999999999999999999999999999999994 67789999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhh
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
+++.+........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+..
T Consensus 155 ~~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~ 226 (279)
T cd05109 155 LARLLDIDETEYH-----ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEK 226 (279)
T ss_pred ceeecccccceee-----cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHC
Confidence 9987654322111 112245678999999999899999999999999999998 999997643322 1222222
Q ss_pred ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 232 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 232 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
.... . ....++.++.+++.+||..||++||++.++++.|+++..
T Consensus 227 ~~~~-~---~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 227 GERL-P---QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCcC-C---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1111 1 124578899999999999999999999999988887754
No 87
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.3e-40 Score=333.82 Aligned_cols=237 Identities=18% Similarity=0.239 Sum_probs=194.0
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|+++.+++.||||++.... ....+..|..++..+. .|++++.++.++...+..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-CCCchhceeeEEEcCCEEEEEEcCCC
Confidence 47999999999999999999999999876432 1233556667766554 3499999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~---- 151 (320)
T cd05590 80 GGDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGK---- 151 (320)
T ss_pred CchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCC----
Confidence 8899988874 4579999999999999999999999999999999999999 5778999999999875432211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+...... +...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~---~~~~~~~i~~~~~~-----~~~~~~ 220 (320)
T cd05590 152 ---TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN---EDDLFEAILNDEVV-----YPTWLS 220 (320)
T ss_pred ---cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC---HHHHHHHHhcCCCC-----CCCCCC
Confidence 1234579999999999999999999999999999999999999998643 33444444433221 224578
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAY 269 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~ 269 (475)
.++.+++..||..||++||++.+
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCCCC
Confidence 99999999999999999999854
No 88
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-42 Score=329.55 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=202.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC-----CEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG-----DYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~-----~~~~lv 82 (475)
.|.-.+++|.|+||.||.|....+++.||||..-.+. ....+|..+++.+.| +||+.+..++... -+..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~--r~knrEl~im~~l~H--pNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK--RYKNRELQIMRKLDH--PNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC--CcCcHHHHHHHhcCC--cCeeeEEEEEEecCCCchhHHHHH
Confidence 5888999999999999999999999999999653322 244679999997776 9999987665522 256799
Q ss_pred EEcCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 83 IDLLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 83 me~~g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|||+..+|.+.++.. +..++...+.-+..||++||.|||+.||+||||||+|+|++ .+.+.+||||||.|+.+..
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcceeecc
Confidence 999999999998743 56799999999999999999999999999999999999996 5679999999999998876
Q ss_pred cccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
... +..+..|..|.|||.+.|.. |+.+.||||.|||+.||+.|+.-|.|....+....+.++....-...+
T Consensus 179 ~ep--------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 179 GEP--------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred CCC--------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 554 34568899999999999864 999999999999999999999999996554433333332211111111
Q ss_pred ---------------------HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 239 ---------------------EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 239 ---------------------~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+....+++..+|+.++|.++|.+|.++.+++
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 113345689999999999999999999987774
No 89
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-40 Score=334.11 Aligned_cols=235 Identities=20% Similarity=0.247 Sum_probs=192.7
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
++||+|+||.||+|++..+++.||||++.... ....+..|.+++..+.+ |++|+.++.++...+..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAK-HPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccC-CCCccceeeEEEcCCeEEEEEeCCC
Confidence 46999999999999999999999999886532 11235567777766543 499999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~---- 151 (321)
T cd05591 80 GGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGV---- 151 (321)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCc----
Confidence 8899988864 4579999999999999999999999999999999999999 5788999999999975433221
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+...... +...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~~~-----~p~~~~ 220 (321)
T cd05591 152 ---TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN---EDDLFESILHDDVL-----YPVWLS 220 (321)
T ss_pred ---cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC---HHHHHHHHHcCCCC-----CCCCCC
Confidence 1234579999999999999999999999999999999999999998643 33444444433321 123468
Q ss_pred HHHHHHHHHHhcCCCCCCCCH
Q 011882 247 TEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~ 267 (475)
.++.+++..||..||++||+.
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~ 241 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGC 241 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCC
Confidence 999999999999999999943
No 90
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.9e-40 Score=332.83 Aligned_cols=235 Identities=21% Similarity=0.282 Sum_probs=190.8
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHH-HHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKL-YKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~i-l~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
+.||+|+||+||+|.+..+++.||||++..... ...+..|..+ ++.+. |++++.++..+...+..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~--hp~iv~~~~~~~~~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC--CCCCCCeeEEEEeCCEEEEEEcCC
Confidence 479999999999999999999999999764321 1223334333 33343 499999999999999999999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~--- 151 (323)
T cd05575 79 NGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSK--- 151 (323)
T ss_pred CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCC---
Confidence 8899988874 4579999999999999999999999999999999999999 5778999999999975432211
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
......||+.|+|||++.+..++.++|||||||+||||++|..||... +..+.+..+...... +...+
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~---~~~~~~~~i~~~~~~-----~~~~~ 219 (323)
T cd05575 152 ----TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR---DTAEMYDNILNKPLR-----LKPNI 219 (323)
T ss_pred ----ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC---CHHHHHHHHHcCCCC-----CCCCC
Confidence 123457999999999999999999999999999999999999999764 334444444443321 23467
Q ss_pred hHHHHHHHHHHhcCCCCCCCCHH
Q 011882 246 PTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
+.++.++|.+||+.||.+||++.
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 220 SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CHHHHHHHHHHhhcCHHhCCCCC
Confidence 89999999999999999999975
No 91
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=325.93 Aligned_cols=242 Identities=21% Similarity=0.218 Sum_probs=199.4
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEe----CCEEEEEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVE----GDYNVLVI 83 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~----~~~~~lvm 83 (475)
..||+|++|.||+|.+ +|+.||||.++..... ..+.+|+.++..++| +||+.+++++.+ ..+.++||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~~~g~~~~~~~~~~~~~lv~ 101 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS--NNILKIYGFIIDIVDDLPRLSLIL 101 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC--CCEEEEeeeEEecccCCCceEEEE
Confidence 6789999999999985 7999999988654322 345689999998876 899999888766 45789999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++.. ...+++...+.++.|++.||.|||+ .+++||||||+|||+ ++++.+||+|||+++.+....
T Consensus 102 Ey~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 102 EYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred EeCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc
Confidence 999 8899999974 4579999999999999999999998 499999999999999 477899999999998654322
Q ss_pred cccccccccCCCCccCccccccccccC--CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g--~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
....||..|+|||++.+ ..++.++|||||||++|||++|..||.+.. ..+.+..+........
T Consensus 178 ----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~---~~~~~~~i~~~~~~~~-- 242 (283)
T PHA02988 178 ----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT---TKEIYDLIINKNNSLK-- 242 (283)
T ss_pred ----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHhcCCCCC--
Confidence 13468899999999976 678999999999999999999999998743 2333444432222211
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
+...+|+++.+++.+||+.||++||++.+|++.|+.+.
T Consensus 243 -~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 243 -LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred -CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 22357899999999999999999999999999998764
No 92
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.1e-41 Score=337.24 Aligned_cols=238 Identities=20% Similarity=0.278 Sum_probs=193.2
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||||++.... ....+..|.+++..+.| ++|+.+..++...+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h--p~i~~~~~~~~~~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH--PFLTALKYSFQTHDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--CCCCceEEEEEcCCEEEEEEeCCC
Confidence 47999999999999999999999999986532 11335567777776654 89999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|..++.. ...+++..+..++.||+.||.|||+ +||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~--- 151 (325)
T cd05594 79 GGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGA--- 151 (325)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCc---
Confidence 8899888763 4579999999999999999999997 899999999999999 5778999999999975432221
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
......||+.|+|||++.+..++.++|||||||+||||++|..||.+... ...+..+...... +...+
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~~~~~i~~~~~~-----~p~~~ 219 (325)
T cd05594 152 ----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIR-----FPRTL 219 (325)
T ss_pred ----ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HHHHHHHhcCCCC-----CCCCC
Confidence 11345799999999999999999999999999999999999999976432 2333333222211 23567
Q ss_pred hHHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011882 246 PTEFASYFHYCRSLRFDDKP-----DYAYLK 271 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RP-----t~~~l~ 271 (475)
++++.+++.+||+.||++|+ ++.+++
T Consensus 220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il 250 (325)
T cd05594 220 SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIM 250 (325)
T ss_pred CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHh
Confidence 89999999999999999997 666653
No 93
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3e-40 Score=349.71 Aligned_cols=252 Identities=22% Similarity=0.254 Sum_probs=199.5
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEG--- 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--- 76 (475)
..+++|++.++||+|+||.||+|.+..+++.||||++...... ..+..|+.++..+. |++++.++......
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~--h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD--FFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC--CCcEEEeecceeccccc
Confidence 3568999999999999999999999999999999998665332 23455666655544 47777765443321
Q ss_pred -----CEEEEEEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEE
Q 011882 77 -----DYNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVY 147 (475)
Q Consensus 77 -----~~~~lvme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vk 147 (475)
...++||||+ +++|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|||| +.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCEE
Confidence 1468999999 88999988643 3468999999999999999999999999999999999999 4678999
Q ss_pred EeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011882 148 IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 227 (475)
Q Consensus 148 L~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~ 227 (475)
|+|||+++.+....... ......||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ....+.
T Consensus 184 L~DFGls~~~~~~~~~~-----~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~---~~~~~~ 255 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDD-----VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN---MEEVMH 255 (496)
T ss_pred EEecccCeecccccccc-----ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHH
Confidence 99999998765432111 1235689999999999999999999999999999999999999997643 233333
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+...... .+...+++++.+++..||..||++||++.++++
T Consensus 256 ~~~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 256 KTLAGRYD----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHhcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 33332221 234678899999999999999999999998865
No 94
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.8e-41 Score=323.05 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=205.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC------
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD------ 77 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~------ 77 (475)
.|+.+++||+|+||+||+|+++.+|+.||+|.+...... ....+|+.+++.|++. ++|+.+.++.....
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~-~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHA-NHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCC-cceEEEEeeeeecccccccc
Confidence 477788999999999999999999999999998776542 3578999999999985 33999988887766
Q ss_pred EEEEEEEcCCCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 78 YNVLVIDLLGPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 78 ~~~lvme~~g~sL~~ll~~~~---~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
..++|+||+..+|..++.... ..++...+..++.||+.||+|||+++|+||||||+|||| ++.+.+||+|||+|
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLADFGLA 167 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeeccchH
Confidence 889999999999999999776 358889999999999999999999999999999999999 47899999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
+.+.-+. +.....++|.+|.|||++.|. .|+...||||+|||++||++++.-|.+..+.+....+.++....
T Consensus 168 ra~~ip~-------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 168 RAFSIPM-------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTP 240 (323)
T ss_pred HHhcCCc-------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 9665322 223456899999999999998 59999999999999999999999999865533333333322111
Q ss_pred c----------------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 V----------------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 ~----------------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. ...+....+...+...+++.+|++.+|.+|.++...++
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 0 01111111223357899999999999999999887643
No 95
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-40 Score=340.43 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=200.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|++.++||+|+||.||+|.+..+++.||||+++... ....+..|+.+++.+.+ ++++.++.++..+...|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h--~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS--EWIVQLHYAFQDDKYLY 119 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC--CCcceEEEEEecCCEEE
Confidence 467999999999999999999999999999999986421 22335678888887765 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+||||+ |++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||| +.++.+||+|||+++.+..
T Consensus 120 lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccC
Confidence 999999 8999999863 468999999999999999999999999999999999999 5788999999999986543
Q ss_pred cccccccccccCCCCccCccccccccccCC----CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~----~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
.... ......||+.|+|||++.+. .++.++|||||||+||||++|..||.+.. ....+.++......
T Consensus 195 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~---~~~~~~~i~~~~~~ 265 (370)
T cd05596 195 NGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---LVGTYSKIMDHKNS 265 (370)
T ss_pred CCcc------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC---HHHHHHHHHcCCCc
Confidence 2210 12345799999999998754 37899999999999999999999998743 23444444432211
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCC--CCCHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYL 270 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l 270 (475)
...+. ...++.++.++|..||..+|++ |+++.++
T Consensus 266 ~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~el 301 (370)
T cd05596 266 LTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEI 301 (370)
T ss_pred CCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence 11111 1246899999999999998987 9997776
No 96
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=336.90 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=218.4
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
+...|++.+.||.|.||.||+|+.+.+|+.+|+|++...... ..+.+|+.+++.+.. |++++.++..++.....
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~-hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG-HPNIVQLKDAFEDPDSV 111 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC-CCCEEEEEEEEEcCCeE
Confidence 556899999999999999999999999999999998765432 478999999999985 39999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC-CCcEEEeecCCcccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRY 157 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGlA~~~ 157 (475)
++|||++ |+.|.+.+... .+++.++..++.||+.++.|||+.||+||||||+|||+...+. .+.+|++|||+|..+
T Consensus 112 ~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 9999999 89999988755 3999999999999999999999999999999999999975433 358999999999987
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
.... .....+||+.|+|||++.+..|+..+||||+|+++|.|++|..||.+.. ......++....+...
T Consensus 190 ~~~~--------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~---~~~~~~~i~~~~~~f~ 258 (382)
T KOG0032|consen 190 KPGE--------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET---EFEIFLAILRGDFDFT 258 (382)
T ss_pred cCCc--------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC---hhHHHHHHHcCCCCCC
Confidence 6621 1245699999999999999999999999999999999999999998854 3444556666655332
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...+..++..+++++..|+..||..|+++.++++
T Consensus 259 -~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 259 -SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -CCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 2334677899999999999999999999988865
No 97
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-40 Score=342.02 Aligned_cols=249 Identities=22% Similarity=0.276 Sum_probs=195.9
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
..|+++++||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.| ++|+.++..+...+..|+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h--~~iv~~~~~~~~~~~~~l 78 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN--EWVVRLYYSFQDKDNLYF 78 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC--CcCCeEEEEEEeCCEEEE
Confidence 36999999999999999999999999999999876432 12356778888888765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||| +.++.+||+|||+|+.+...
T Consensus 79 v~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 79 VMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCcccccc
Confidence 99999 8899998874 3568999999999999999999999999999999999999 57889999999998644211
Q ss_pred ccccc----------------------------------------cccccCCCCccCccccccccccCCCCCCchhHHHH
Q 011882 161 ATHQH----------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 200 (475)
Q Consensus 161 ~~~~~----------------------------------------~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSl 200 (475)
..... .........+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 10000 00001124579999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCC
Q 011882 201 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 201 G~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 266 (475)
||+||||++|..||.+... .+...++.........+ ....+++++.++|.+|+ .+|.+|++
T Consensus 235 Gvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTP---LETQMKVINWQTSLHIP-PQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred hHHHHHHHhCCCCCCCCCH---HHHHHHHHccCCCcCCC-CcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 9999999999999987432 23333332211111111 11346789999998876 59999998
No 98
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.4e-40 Score=332.04 Aligned_cols=264 Identities=19% Similarity=0.277 Sum_probs=201.2
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||+|+++.... ...+..|..++..+.. |++|+.++.++...+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~-hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-HPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCC-CCcCCceeeEEEeCCEEEEEEeCCC
Confidence 479999999999999999999999999875421 1235567777665533 499999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|..++.. ...+++..++.|+.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~---- 151 (329)
T cd05618 80 GGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD---- 151 (329)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCC----
Confidence 8899888763 4579999999999999999999999999999999999999 5778999999999975432211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC------CHHHHHHHHhhccccccHHH
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG------TKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~------~~~~~~~~i~~~~~~~~~~~ 240 (475)
......||..|+|||++.+..++.++|||||||++|||++|..||...... ........+..... .
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----~ 223 (329)
T cd05618 152 ---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----R 223 (329)
T ss_pred ---ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-----C
Confidence 123467999999999999999999999999999999999999999642211 11122222322222 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 297 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 297 (475)
++..++.++.+++.+||..||++||++.... .+.+++ ..++-..++|......
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~-~~~~i~---~hp~f~~~~~~~~~~~ 276 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGCHPQT-GFADIQ---GHPFFRNVDWDLMEQK 276 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCC-CHHHHh---cCCCCCCCCHHHHHcC
Confidence 3356788999999999999999999853110 011221 1234445678765443
No 99
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-40 Score=340.21 Aligned_cols=255 Identities=16% Similarity=0.192 Sum_probs=203.6
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEc--cCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~--~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
.+..+|+++++||+|+||.||+|... .+++.||||.+... ....+|+++++.++| ++|+.++.++......|+
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISH--RAIINLIHAYRWKSTVCM 163 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCC--CCccceeeeEeeCCEEEE
Confidence 34567999999999999999999754 35678999987543 345689999998876 899999988888999999
Q ss_pred EEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 82 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 82 vme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
+||+++++|.+++. ....+++.+++.|+.||+.||.|||++|||||||||+|||| +..+.+||+|||+++.+....
T Consensus 164 v~e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 164 VMPKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred EehhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccCccc
Confidence 99999999999885 45679999999999999999999999999999999999999 577899999999998665432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-------
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV------- 234 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~------- 234 (475)
.. .......||+.|+|||++.+..++.++|||||||+||||++|..||.+.........+..+.....
T Consensus 240 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 240 DT-----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cc-----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 21 112346799999999999999999999999999999999999999987654433333332221100
Q ss_pred --------------------cccHHHH--hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 235 --------------------STSIEAL--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 235 --------------------~~~~~~l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.. ...++.++.++|.+||..||++||++.+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000111 1245678999999999999999999988843
No 100
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-40 Score=335.74 Aligned_cols=244 Identities=22% Similarity=0.276 Sum_probs=194.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.++||+|+||.||++++..+++.||||++.... ....+..|..++..+.+ ++|+.++.++...++.|+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~l~~~~~~~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC--QWITTLHYAFQDENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC--CCEeeEEEEEEcCCEEEE
Confidence 57999999999999999999999999999999876421 11235566777665544 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.+...
T Consensus 79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999 999999998666789999999999999999999999999999999999999 47788999999999876443
Q ss_pred ccccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
... ......||+.|+|||++.+ ..++.++|||||||+||||++|..||.... ..+.+.++......
T Consensus 156 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---~~~~~~~i~~~~~~ 226 (331)
T cd05624 156 GTV------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHEER 226 (331)
T ss_pred Cce------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC---HHHHHHHHHcCCCc
Confidence 221 1123579999999999876 457899999999999999999999997643 33444444432221
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCC
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKP 265 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RP 265 (475)
...+.....++.++.+++.+|+..++ +|+
T Consensus 227 ~~~p~~~~~~~~~~~~li~~ll~~~~-~~~ 255 (331)
T cd05624 227 FQFPSHITDVSEEAKDLIQRLICSRE-RRL 255 (331)
T ss_pred ccCCCccccCCHHHHHHHHHHccCch-hhc
Confidence 22222234578999999999998654 444
No 101
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-41 Score=337.72 Aligned_cols=257 Identities=21% Similarity=0.340 Sum_probs=221.4
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
...-.+||-|.||.||.|.|++....||||.++.+... .+|..|+.+++.+.| +|++++.++|..+..+||+.|||
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikH--pNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--PNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcC--ccHHHHhhhhccCCCeEEEEeccc
Confidence 34567999999999999999999999999998877654 579999999999987 99999999999999999999999
Q ss_pred CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 g~sL~~ll~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
.|+|.+++..|++. ++...++.++.||..||+||..+++|||||-..|+|++ ++..|||+||||++.+..+....|
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhhhhcCCceecc
Confidence 99999999988765 77888899999999999999999999999999999995 788999999999999877655333
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
. ...-...|.|||-+.-..++.|+|||+|||+|||+.| |..||.+.+.......+++...+. -+.+
T Consensus 424 A------GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~-------~PeG 490 (1157)
T KOG4278|consen 424 A------GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMD-------GPEG 490 (1157)
T ss_pred c------CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccccc-------CCCC
Confidence 2 2233567999999999999999999999999999998 999999865433333333332222 2478
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGF 283 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~ 283 (475)
||+.+.+|+..||++.|.+||+|+++.+.|+.+|....+
T Consensus 491 CPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 491 CPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred CCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999976654
No 102
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-40 Score=333.84 Aligned_cols=264 Identities=20% Similarity=0.268 Sum_probs=203.7
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||||++..... ...+..|..++..+.+ |++++.++.++...+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASS-NPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcC-CCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 479999999999999999999999999875422 1236678888877754 389999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|..++.. .+.+++..++.|+.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 80 ~~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (327)
T cd05617 80 GGDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGD---- 151 (327)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCC----
Confidence 8899888863 4579999999999999999999999999999999999999 4778899999999975332211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC----CHHHHHHHHhhccccccHHHHh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~----~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
.....+||+.|+|||++.+..++.++|||||||+||||++|..||...... .....+..+..... .+.
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~p 223 (327)
T cd05617 152 ---TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-----RIP 223 (327)
T ss_pred ---ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-----CCC
Confidence 123467999999999999999999999999999999999999999653221 11222222222221 133
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 297 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 297 (475)
..++.++.+++.+||..||.+|+++.... .++++. ..++....+|+.....
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~-~~~~i~---~h~~f~~~~~~~~~~~ 274 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGCQPQT-GFSDIK---SHTFFRSIDWDLLEKK 274 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCC-CHHHHH---cCCCCCCCCHHHHHhC
Confidence 55788999999999999999999854211 122222 2234455678765433
No 103
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.2e-40 Score=335.37 Aligned_cols=239 Identities=18% Similarity=0.254 Sum_probs=193.4
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||||+++.... ...+..|..++..+.+ |++|+.++.++......|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~-hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASN-HPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-CCCCCceEEEEEcCCEEEEEEeCCC
Confidence 479999999999999999999999999875321 1236678888877754 499999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
|++|.+++.. .+.+++..++.|+.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 80 ~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~---- 151 (329)
T cd05588 80 GGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGD---- 151 (329)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCC----
Confidence 8899888763 4579999999999999999999999999999999999999 5778999999999975322111
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCC------HHHHHHHHhhccccccHHH
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~------~~~~~~~i~~~~~~~~~~~ 240 (475)
......||..|+|||++.+..++.++|||||||++|||++|..||....... ....+..+..... .
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 223 (329)
T cd05588 152 ---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-----R 223 (329)
T ss_pred ---ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-----C
Confidence 1234689999999999999999999999999999999999999996432111 1112222322222 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
+...++.++.+++.+||..||.+|+++.
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~ 251 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCH 251 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 3356788999999999999999999843
No 104
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.5e-40 Score=330.16 Aligned_cols=236 Identities=22% Similarity=0.284 Sum_probs=192.1
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||+||+|.+..+++.||||+++... .......|..++..+. .|++++.++.++...+..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-EHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 47999999999999999999999999886532 2234556666665542 3599999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (316)
T cd05619 80 GGDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDA---- 151 (316)
T ss_pred CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCC----
Confidence 8899999874 3569999999999999999999999999999999999999 4778999999999975432211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......||..|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~ 220 (316)
T cd05619 152 ---KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD---EEELFQSIRMDNP-----CYPRWLT 220 (316)
T ss_pred ---ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCC-----CCCccCC
Confidence 1234579999999999999999999999999999999999999997643 2333333332221 1223567
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~ 268 (475)
.++.+++.+||..||++||++.
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCCh
Confidence 8999999999999999999975
No 105
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-40 Score=334.03 Aligned_cols=250 Identities=22% Similarity=0.272 Sum_probs=198.3
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.++||+|+||.||++.+..+++.||+|++.... ....+..|..++..+. |++++.++.++...+..|+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD--NQWITTLHYAFQDENNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC--CCCEeeEEEEEecCCEEEE
Confidence 57999999999999999999999999999999875321 1123556777766554 4899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++......+++..+..|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccC
Confidence 99999 899999998666779999999999999999999999999999999999999 57789999999999765432
Q ss_pred ccccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
... ......||+.|+|||++.+ ..++.++|||||||+||||++|..||... ...+.+.++......
T Consensus 156 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~---~~~~~~~~i~~~~~~ 226 (332)
T cd05623 156 GTV------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKIMNHKER 226 (332)
T ss_pred Ccc------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC---CHHHHHHHHhCCCcc
Confidence 221 1123579999999999863 45789999999999999999999999764 334445555443322
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCC--CCCHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYL 270 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l 270 (475)
...+..+..++.++.+++.+|+..+++. |+++.++
T Consensus 227 ~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~ 263 (332)
T cd05623 227 FQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDF 263 (332)
T ss_pred ccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHH
Confidence 2223334567899999999999765443 5665555
No 106
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=9.6e-40 Score=317.41 Aligned_cols=255 Identities=24% Similarity=0.345 Sum_probs=207.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.++||+|+||.||+|++..+++.||||.+..... ...+..|+++++.++| ++++.+..++...+..++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH--PNVIKYLDSFIEDNELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC--cceeeeeeeEEECCeEEE
Confidence 689999999999999999999999999999997654221 1246778888888865 899999999888999999
Q ss_pred EEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 82 VIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
+|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++ ..+.++|+|||++..+
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceec
Confidence 99999 77999888642 34589999999999999999999999999999999999994 6788999999999876
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
..... ......|+..|+|||.+.+..++.++||||||+++|||++|..||..... ........+........
T Consensus 157 ~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~ 228 (267)
T cd08228 157 SSKTT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLFSLCQKIEQCDYPPL 228 (267)
T ss_pred cchhH-------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-cHHHHHHHHhcCCCCCC
Confidence 54321 11234688999999999988899999999999999999999999976432 22222333322222111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
....++..+.+++.+||..+|++||++.+|++.|+.+
T Consensus 229 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 229 ---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1234678999999999999999999999999998865
No 107
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.3e-40 Score=338.97 Aligned_cols=271 Identities=19% Similarity=0.272 Sum_probs=208.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++++.||+|+||.||+|.+..+++.||||+++... ....+..|..++..+.+ ++++.++..+...+..|+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~iv~~~~~~~~~~~~~l 78 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG--AWVVKMFYSFQDKRNLYL 78 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC--CCEeeEEEEEEcCCEEEE
Confidence 47999999999999999999999999999999986421 22346678888877765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||| +..+.+||+|||+++.+...
T Consensus 79 v~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 79 IMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred EEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccccc
Confidence 99999 8899999874 4569999999999999999999999999999999999999 57889999999999765322
Q ss_pred cccccc----------------------------ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCC
Q 011882 161 ATHQHI----------------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSL 212 (475)
Q Consensus 161 ~~~~~~----------------------------~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~ 212 (475)
...... ........+||+.|+|||++.+..++.++|||||||+||||++|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 110000 0001124579999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccc
Q 011882 213 PWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWT 292 (475)
Q Consensus 213 Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~ 292 (475)
||.+... ...+.++.........+. ...++.++.++|.+|+ .||.+|++...+.+++.+. +-..++|.
T Consensus 235 Pf~~~~~---~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp-------~f~~~~~~ 302 (360)
T cd05627 235 PFCSETP---QETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHP-------FFEGVDWG 302 (360)
T ss_pred CCCCCCH---HHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC-------CCCCCCHH
Confidence 9977433 333444432211111110 1236789999999976 5999999754444445443 33446787
Q ss_pred ccc
Q 011882 293 ILK 295 (475)
Q Consensus 293 ~~~ 295 (475)
...
T Consensus 303 ~~~ 305 (360)
T cd05627 303 HIR 305 (360)
T ss_pred HHh
Confidence 653
No 108
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.9e-40 Score=323.71 Aligned_cols=236 Identities=19% Similarity=0.243 Sum_probs=190.5
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||+|+||+||+|.+..+++.||||++..... ...+..|+.+++.+.+ ++++.+..++......|+||||+ ++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS--RFIVSLAYAFQTKTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC--CcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence 6999999999999999999999998764322 1345678888888855 89999988888889999999999 88
Q ss_pred CHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 89 SLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 89 sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++..+.....
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~--- 152 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQS--- 152 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCc---
Confidence 99887743 23459999999999999999999999999999999999999 4678899999999986644322
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHH-HHHHHHhhccccccHHHHhcC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~ 244 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||......... .....+.... ..+...
T Consensus 153 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 223 (280)
T cd05608 153 ----KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS-----VTYPDK 223 (280)
T ss_pred ----cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC-----CCCccc
Confidence 123457999999999999999999999999999999999999999764332211 1122221111 122346
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
++.++.+++.+||+.||++||++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCC
Confidence 78999999999999999999954
No 109
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.3e-40 Score=337.56 Aligned_cols=257 Identities=19% Similarity=0.231 Sum_probs=200.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC-----E
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD-----Y 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~-----~ 78 (475)
+|+++++||+|+||.||+|.+..+++.||||.+..... ...+.+|+++++.++| +||+.++.+....+ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKH--DNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCC--CCcCCHhheecCCCccccce
Confidence 58899999999999999999999999999998754321 2357788888888875 89999888777665 7
Q ss_pred EEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
.|+||||++++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~~~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 79 IYVVTELMQSDLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEEEeeccccCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecc
Confidence 89999999989988876 34579999999999999999999999999999999999999 577899999999998654
Q ss_pred ccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----- 232 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~----- 232 (475)
..... ......+|..|+|||++.+.. ++.++|||||||++|||++|+.||.+.........+......
T Consensus 155 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 155 PDESK------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred cCccc------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 32211 112346899999999998754 799999999999999999999999875432222222111000
Q ss_pred ---------------c-ccccHH---HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 233 ---------------K-VSTSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 233 ---------------~-~~~~~~---~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
. ...... .+....++++.+||.+||..||++||++.++ |++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~---l~hp~~ 291 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADA---LAHPYL 291 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHH---hcCHhh
Confidence 0 000111 1223457889999999999999999998877 444443
No 110
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.7e-40 Score=335.69 Aligned_cols=251 Identities=20% Similarity=0.306 Sum_probs=197.3
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEe----
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVE---- 75 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~---- 75 (475)
.+.++|++++.||.|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.| ++|+.++.+...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKH--ENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCC--Cchhhhhhhhcccccc
Confidence 356889999999999999999999999999999998765322 2346678999988876 888887665432
Q ss_pred --CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 76 --GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 76 --~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
....|++|++++++|.+++. ...+++..+..|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~ 164 (343)
T cd07878 90 ENFNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGL 164 (343)
T ss_pred cccCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCcc
Confidence 24569999999999998886 3569999999999999999999999999999999999999 4778999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
++...... ....||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.........+......
T Consensus 165 ~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07878 165 ARQADDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234 (343)
T ss_pred ceecCCCc----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 98654321 24578999999999987 46899999999999999999999999764322111111111000
Q ss_pred c-----------------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 K-----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ~-----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. .......+..++++.+.+|+.+||..||++||++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell 296 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL 296 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 0 00111223345667889999999999999999988774
No 111
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=341.64 Aligned_cols=236 Identities=19% Similarity=0.343 Sum_probs=198.4
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCCH
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPSL 90 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL 90 (475)
++.||+|+.|.||+|+ -.++.||||.++. ...-+++-|+.|+| +||+.+.++|.....+||+|||| .|-|
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~e-----lkETdIKHLRkLkH--~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRE-----LKETDIKHLRKLKH--PNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhh-----hhhhhHHHHHhccC--cceeeEeeeecCCceeEEeeeccccccH
Confidence 5789999999999998 4688999996532 22345666777776 99999999999999999999999 8899
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccccc
Q 011882 91 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 170 (475)
Q Consensus 91 ~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~ 170 (475)
..+++ .+++++...+..|..+|+.||.|||.+.|||||||.-||||+ .+..|||+|||-++...+..+.
T Consensus 200 ~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STk------- 268 (904)
T KOG4721|consen 200 YEVLK-AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTK------- 268 (904)
T ss_pred HHHHh-ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhh-------
Confidence 99998 467899999999999999999999999999999999999996 6678999999999988776442
Q ss_pred CCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHH
Q 011882 171 NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFA 250 (475)
Q Consensus 171 ~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~ 250 (475)
-.|+||..|||||++.+.+.+.|+|||||||||||||||..||.+.+.. ..+..+....+.- .++..||+.|+
T Consensus 269 -MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---AIIwGVGsNsL~L---pvPstcP~Gfk 341 (904)
T KOG4721|consen 269 -MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---AIIWGVGSNSLHL---PVPSTCPDGFK 341 (904)
T ss_pred -hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---eeEEeccCCcccc---cCcccCchHHH
Confidence 3579999999999999999999999999999999999999999875432 1122222222222 23467899999
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 251 SYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 251 ~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
-||++||+..|..||+|.+|+.-|
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHH
Confidence 999999999999999999987655
No 112
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.4e-40 Score=330.32 Aligned_cols=235 Identities=20% Similarity=0.262 Sum_probs=194.2
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..+++.||||++.... ....+..|.+++..+. .|++++.++.++...+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-KHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 47999999999999999999999999886432 2234567777777665 3599999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
|++|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (318)
T cd05570 80 GGDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGV---- 151 (318)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCC----
Confidence 8899988874 4579999999999999999999999999999999999999 5778999999999975322211
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
.....+||..|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+...... +...++
T Consensus 152 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~~ 220 (318)
T cd05570 152 ---TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD---EDELFQSILEDEVR-----YPRWLS 220 (318)
T ss_pred ---cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCC-----CCCcCC
Confidence 1234579999999999999999999999999999999999999997643 33334444333221 234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCH
Q 011882 247 TEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~ 267 (475)
.++.++|.+||..||++||++
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCC
Confidence 999999999999999999998
No 113
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.4e-40 Score=331.06 Aligned_cols=238 Identities=21% Similarity=0.289 Sum_probs=194.4
Q ss_pred eeeEeeeCceeEEEEEEc---cCCeEEEEEEeccCC------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 12 GRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+++||+|+||.||++++. .+++.||||+++... ....+..|..+++.++| ++|+.++.++..++..|+|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~~~~~~~~~~~~~lv 78 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH--PFIVDLIYAFQTGGKLYLI 78 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC--CchhceeeEEecCCeEEEE
Confidence 368999999999999864 468899999876431 12345678888888875 9999999888899999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|.+++.. ...+.+..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++......
T Consensus 79 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 79 LEYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred EeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCC
Confidence 9999 8899998874 4568999999999999999999999999999999999999 577899999999997543322
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ....+..+..... .+
T Consensus 155 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~---~~~~~~~~~~~~~-----~~ 219 (323)
T cd05584 155 T-------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN---RKKTIDKILKGKL-----NL 219 (323)
T ss_pred C-------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC---HHHHHHHHHcCCC-----CC
Confidence 1 1234579999999999999899999999999999999999999997643 2333444433322 12
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKP-----DYAYL 270 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l 270 (475)
...+++++.++|.+||..+|++|| ++.++
T Consensus 220 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l 253 (323)
T cd05584 220 PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEV 253 (323)
T ss_pred CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHH
Confidence 356789999999999999999999 65555
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.9e-40 Score=336.01 Aligned_cols=248 Identities=20% Similarity=0.251 Sum_probs=194.5
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEe-----
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVE----- 75 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~----- 75 (475)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|..+++.+.| ++++.+..+...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH--KNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCC--CCccccceeeccccccc
Confidence 56899999999999999999999999999999998865322 2356778888888765 888888665432
Q ss_pred -CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 76 -GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 76 -~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
....|+||||++++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCc
Confidence 24579999999889988775 358899999999999999999999999999999999999 47789999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
+....... .....||..|+|||++.+..++.++|||||||+||||++|+.||.+.... ..+.++.....
T Consensus 174 ~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~ 242 (364)
T cd07875 174 RTAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKVIEQLG 242 (364)
T ss_pred cccCCCCc--------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcC
Confidence 86543211 13457899999999999999999999999999999999999999774332 22222211000
Q ss_pred cc-------------------------cHHHH------------hcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 ST-------------------------SIEAL------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 ~~-------------------------~~~~l------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.. ....+ ....+.++.+||.+||..||.+||++.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L 316 (364)
T cd07875 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316 (364)
T ss_pred CCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00 00000 011245789999999999999999988773
No 115
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-40 Score=328.36 Aligned_cols=258 Identities=21% Similarity=0.283 Sum_probs=204.4
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCe----EEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~----~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
.-..+|++.+.||+|+||.||+|.+..+++ .||||+++.... ...+..|+.+++.+.| +|++.+++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN--PHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEcCC
Confidence 345789999999999999999999876665 489998764432 2356778888887765 8999998888765
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
. .+++++|+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~-~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~ 157 (316)
T cd05108 82 T-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAK 157 (316)
T ss_pred C-ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccc
Confidence 4 56788887 889999998666679999999999999999999999999999999999999 467889999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
.+....... ......++..|+|||++.+..++.++|||||||+||||++ |..||.+.... + +..+.....
T Consensus 158 ~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~-~~~~~~~~~ 228 (316)
T cd05108 158 LLGADEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---E-ISSILEKGE 228 (316)
T ss_pred cccCCCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---H-HHHHHhCCC
Confidence 765432211 0122345678999999999999999999999999999997 99999764322 2 222222221
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
... ....++.++.+++.+||..+|++||++.+|+..|.++..
T Consensus 229 ~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 229 RLP---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 111 124567899999999999999999999999998888764
No 116
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.6e-40 Score=338.77 Aligned_cols=258 Identities=22% Similarity=0.288 Sum_probs=205.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~-----~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
.++|+++++||+|+||.||+|++... +..||||++...... ..+..|++++..+.. |+||+.+++++....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~-HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGP-HLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCC-CCCeeeEEEEEccCC
Confidence 45688999999999999999987433 357999998654332 357789999988863 399999999999999
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC----------------------------------------------------------
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS---------------------------------------------------------- 98 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~---------------------------------------------------------- 98 (475)
..||||||+ +++|.+++....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 999999999 899998876421
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC
Q 011882 99 -------------------------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 99 -------------------------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 141 (475)
..+++.+++.++.||+.||.|||+++|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~--- 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA--- 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe---
Confidence 2378888999999999999999999999999999999994
Q ss_pred CCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 011882 142 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAG 220 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~ 220 (475)
.++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||+||||++ |..||......
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred CCCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 6788999999999866432211 11233467788999999999899999999999999999997 99999764322
Q ss_pred CHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 221 TKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
. ..+..+..... . .....+|.++.+++.+||..+|++||++.+|.+.|++++
T Consensus 347 ~--~~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 347 S--TFYNKIKSGYR-M---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred H--HHHHHHhcCCC-C---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1 11222222111 1 123467899999999999999999999999999999875
No 117
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1e-39 Score=323.82 Aligned_cols=255 Identities=19% Similarity=0.257 Sum_probs=203.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|++.++||.|+||.||+|.+..+++.||+|.+..... ...+..|+.+++.++| ++|+.++.++...+..++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH--ANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC--CCcceEEEEEecCCeEEEE
Confidence 4679999999999999999999999999999998764432 2356779999988876 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||++++|.+++......+++..+..++.||+.||.|||++||+|+||||+|||+ +.++.+||+|||++........
T Consensus 83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCCC
Confidence 9999889999987666679999999999999999999999999999999999999 4778999999999975433211
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV------- 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~------- 234 (475)
......++..|+|||++.+. .++.++|||||||++|||++|..||.+.........+..+.....
T Consensus 160 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 160 -------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred -------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 11234678999999998764 478999999999999999999999987543221111111110000
Q ss_pred ---------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 235 ---------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 235 ---------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..........+++++.+||.+||..||.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00112233457889999999999999999999887753
No 118
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.4e-40 Score=318.93 Aligned_cols=252 Identities=21% Similarity=0.360 Sum_probs=205.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
.++|++.++||+|+||.||+|.+ .++..||+|.+..... ...+..|..+++.++| ++++.+..........+++||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH--DKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCCcEEEEe
Confidence 46899999999999999999986 4667899998765432 3567889999998875 899999888888899999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+ +++|.+++... ...+++..++.++.||+.||.|||+.+++||||||+||++ +..+.+||+|||++........
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCCCce
Confidence 99 88999998643 3568999999999999999999999999999999999999 4778999999999987654221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......++..|+|||++.+..++.++|||||||++|+|++ |..||..... ......+...... ..
T Consensus 159 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~~~~~----~~ 225 (261)
T cd05072 159 T------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVMSALQRGYRM----PR 225 (261)
T ss_pred e------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCCCC----CC
Confidence 1 1123346778999999998889999999999999999998 9999976432 2222333222111 11
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
...+|.++.+++.+||..+|++||+++++.++|++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 24578999999999999999999999999999875
No 119
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.5e-40 Score=332.66 Aligned_cols=244 Identities=21% Similarity=0.310 Sum_probs=198.7
Q ss_pred eeeEeeeCceeEEEEEEc---cCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 12 GRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
++.||+|+||.||++.+. .+++.||||++.... ....+..|++++..+.| ++|+.++.++..++..|+|||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e 78 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH--PFIVKLHYAFQTEGKLYLILD 78 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC--CCcccEEEEEEcCCEEEEEEc
Confidence 367999999999999863 578999999886432 12345678888887765 999999999999999999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|+ +++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 79 FLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCC-
Confidence 99 8899998863 4569999999999999999999999999999999999999 4778999999999986543221
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
......||+.|+|||++.+..++.++|||||||+||||++|+.||.+. +..+.+..+...... +..
T Consensus 154 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~---~~~~~~~~i~~~~~~-----~p~ 219 (318)
T cd05582 154 ------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK---DRKETMTMILKAKLG-----MPQ 219 (318)
T ss_pred ------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC---CHHHHHHHHHcCCCC-----CCC
Confidence 123457999999999999988999999999999999999999999764 233444444333321 234
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRD 276 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~ 276 (475)
.+++++.+++.+||+.||++||++.+ +.+++.+
T Consensus 220 ~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 220 FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 57899999999999999999999776 4444443
No 120
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.7e-40 Score=333.54 Aligned_cols=252 Identities=19% Similarity=0.204 Sum_probs=194.9
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--- 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--- 76 (475)
.+.++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|..+++.+.| ++++.++.++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH--KNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCC--Cchhceeeeeeccccc
Confidence 356899999999999999999999999999999998865422 2346678888888875 8898887765432
Q ss_pred ---CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 ---DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ---~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
...|+||||++++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcc
Confidence 3579999999888888775 358999999999999999999999999999999999999 4778999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
++....... .....||..|+|||++.+..++.++|||||||+||+|++|..||.+.................
T Consensus 166 ~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (355)
T cd07874 166 ARTAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237 (355)
T ss_pred cccCCCccc--------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 986543211 134578999999999999999999999999999999999999998643211111100000000
Q ss_pred c-------cc---------------cHH------------HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 234 V-------ST---------------SIE------------ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 234 ~-------~~---------------~~~------------~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. .. ... ......+.++.++|.+||..||++||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell 309 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh
Confidence 0 00 000 00112346789999999999999999988874
No 121
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.3e-40 Score=323.67 Aligned_cols=240 Identities=20% Similarity=0.241 Sum_probs=193.3
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||+|+||.||++.+..+|+.||+|.+.... ....+..|.++++.+.+ ++++.+..++..+...|+||||+ |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~i~~~~~~~~~~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS--PFIVNLAYAFESKTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC--CcEEEEEEEEecCCeEEEEEecCCCC
Confidence 699999999999999999999999875422 12335568889888865 89999988888899999999999 88
Q ss_pred CHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccc
Q 011882 89 SLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 167 (475)
Q Consensus 89 sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~ 167 (475)
+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.++|+|||++..+.....
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~----- 150 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKT----- 150 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCce-----
Confidence 9988875433 358999999999999999999999999999999999999 4778899999999986643221
Q ss_pred cccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHHHHHhhccccccHHHHhcCCh
Q 011882 168 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
.....||..|+|||++.+..++.++|||||||++|||++|..||........ .+........... .....++
T Consensus 151 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 223 (277)
T cd05607 151 ---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK----FEHQNFT 223 (277)
T ss_pred ---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc----cccccCC
Confidence 1234689999999999999999999999999999999999999976433211 1222222221111 1124578
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.++.+++.+||+.||++||++.++.
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccch
Confidence 9999999999999999999997764
No 122
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-39 Score=317.33 Aligned_cols=255 Identities=16% Similarity=0.270 Sum_probs=207.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccC---CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~---~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
.++|++.+.||+|+||.||+|.+..+ ...||||+++..... ..+..|..++..+++ ++++.+..+....+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH--PNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC--CCcceEeEEEecCCce
Confidence 36799999999999999999998654 458999987654332 346678888888765 8999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
+++|||+ +++|.+++......+++..++.++.|++.||.|||+++|+||||||+|||+ +.++.++|+|||+++.+.
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence 9999999 889999998666679999999999999999999999999999999999999 477889999999999775
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
...... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.... ..+....+.......
T Consensus 158 ~~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~---~~~~~~~~~~~~~~~- 228 (266)
T cd05033 158 DSEATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS---NQDVIKAVEDGYRLP- 228 (266)
T ss_pred ccccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC---HHHHHHHHHcCCCCC-
Confidence 222110 0112345678999999999899999999999999999998 999997643 233333333221111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
....++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 ---PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1245789999999999999999999999999999876
No 123
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3e-40 Score=337.78 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=198.9
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
..++|++.++||+|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.| ++++.++.++..+...
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~~~~ 118 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS--PWVVQLFCAFQDDKYL 118 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC--CCEeeEEEEEEcCCEE
Confidence 3578999999999999999999999999999999875421 12346678888887765 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||| +..+.+||+|||+|+.+.
T Consensus 119 ~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecc
Confidence 9999999 8999999863 468999999999999999999999999999999999999 578899999999998764
Q ss_pred ccccccccccccCCCCccCccccccccccCCC----CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~----~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
.... .......||+.|+|||++.+.. ++.++|||||||+||||++|..||.+.. ....+.++.....
T Consensus 194 ~~~~------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~---~~~~~~~i~~~~~ 264 (370)
T cd05621 194 ETGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS---LVGTYSKIMDHKN 264 (370)
T ss_pred cCCc------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCc
Confidence 3221 1123567999999999997653 7899999999999999999999997643 3344444443222
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCC--CCCHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYLK 271 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l~ 271 (475)
....+. ...++..+++++..|+..++.. |+++.+++
T Consensus 265 ~~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l 302 (370)
T cd05621 265 SLNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIK 302 (370)
T ss_pred ccCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHh
Confidence 111111 1246788999999999754433 77876663
No 124
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.7e-40 Score=331.07 Aligned_cols=260 Identities=19% Similarity=0.312 Sum_probs=203.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeE-eC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGV-EG 76 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~-~~ 76 (475)
.++|++.+.||+|+||.||+|.+.. +++.||+|+++..... ..+..|+.++..+.. |++|+.+++++. .+
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~-h~niv~~~~~~~~~~ 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGH-HLNVVNLLGACTKPG 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhcc-CcchhheeeeEecCC
Confidence 4689999999999999999997543 4578999998754332 346678888888843 388998887665 45
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcC---------------------------------------------------------
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCS--------------------------------------------------------- 98 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~--------------------------------------------------------- 98 (475)
...+++|||+ +++|.+++....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 6788999999 889999885321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCc
Q 011882 99 ---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 175 (475)
Q Consensus 99 ---~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~ 175 (475)
..+++..+..++.||+.||+|||++||+||||||+|||+. .++.+||+|||+++.+...... .......
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~-----~~~~~~~ 236 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY-----VRKGDAR 236 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcch-----hhccCCC
Confidence 2578999999999999999999999999999999999994 6788999999999876432211 1123345
Q ss_pred cCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHH
Q 011882 176 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFH 254 (475)
Q Consensus 176 GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~ 254 (475)
++..|+|||++.+..++.++|||||||+||||++ |..||.+..... .+.......... .....+++++.+++.
T Consensus 237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 310 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE---EFCRRLKEGTRM---RAPEYATPEIYSIML 310 (337)
T ss_pred CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH---HHHHHHhccCCC---CCCccCCHHHHHHHH
Confidence 6788999999999999999999999999999997 999997743321 111111111111 112456789999999
Q ss_pred HHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 255 YCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 255 ~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
+||+.+|++||++.+|++.|++++..
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999998753
No 125
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-39 Score=315.35 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=203.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
++|++.+.||+|+||.||++.+. .+..||+|.+..... ...+..|+.+++.+.+ ++++.+++++......++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSH--PKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCC--CCceeEEEEEccCCCEEEEEEc
Confidence 57999999999999999999874 556899998765433 3567889999998875 8999999999999999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDEYT- 156 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCcee-
Confidence 9 889999987555568999999999999999999999999999999999999 46788999999999865432211
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+.+..+....... ...
T Consensus 157 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~---~~~~~~~i~~~~~~~----~~~ 224 (256)
T cd05114 157 -----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS---NYEVVEMISRGFRLY----RPK 224 (256)
T ss_pred -----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHHCCCCCC----CCC
Confidence 1123345678999999998889999999999999999999 999997643 233344443322111 123
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
..+.++.+++.+||..+|++||++++|++.|
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 4578899999999999999999999998765
No 126
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-39 Score=342.15 Aligned_cols=249 Identities=18% Similarity=0.216 Sum_probs=204.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccC-CeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~-~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..|.+.+.||.|+||.||+|.+..+ ++.||+|.+...... ..+..|+.++..+.| ++|+.++.++...+..||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H--pniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH--FGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC--CCEeEEEEEEEECCEEEEEE
Confidence 4499999999999999999998877 788999976544322 245678888887765 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 84 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 84 e~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||+ |++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||| +..+.+||+|||+++.+..
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCceecCC
Confidence 999 89999887532 3458999999999999999999999999999999999999 4778999999999987654
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+.......
T Consensus 222 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~---~~~~~~~~~~~~~~~--- 290 (478)
T PTZ00267 222 SVSL-----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS---QREIMQQVLYGKYDP--- 290 (478)
T ss_pred cccc-----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCCC---
Confidence 3211 12245679999999999999999999999999999999999999997633 333344443332221
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
+...++.++.++|..||..||++||++.+++.
T Consensus 291 -~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 -FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 22457889999999999999999999998853
No 127
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.1e-40 Score=322.13 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=203.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEc----cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~----~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
.+|++.++||+|+||.||+|.+. .+++.||+|.+...... ..+..|+.+++.+.| ++++.+.++.......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH--PNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC--CCeeeEEEEEecCCce
Confidence 57999999999999999999853 35578999988643332 347789899888865 9999999998889999
Q ss_pred EEEEEcC-CCCHHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC
Q 011882 80 VLVIDLL-GPSLEDLFNFC----------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 142 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~----------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 142 (475)
|++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---cC
Confidence 9999999 78999988532 1247889999999999999999999999999999999999 46
Q ss_pred CCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 011882 143 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 221 (475)
Q Consensus 143 ~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~ 221 (475)
.+.+||+|||+++........ .......++..|+|||++.+..++.++|||||||+||||++ |..||.+...
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-- 232 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYY-----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-- 232 (283)
T ss_pred CCcEEeccccccccccCCcce-----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 788999999999876433211 11233456788999999998889999999999999999998 9999977432
Q ss_pred HHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 222 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 222 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
......+..... ...+..++.++.+++.+||..||++||++.+|.+.|+.
T Consensus 233 -~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 -QEVIEMVRKRQL----LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHcCCc----CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 222222222221 12345688999999999999999999999999888763
No 128
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.3e-40 Score=322.07 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=206.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
.++|.+.+.||+|+||.||+|.+.. +++.||||+++..... ..+.+|+++++.+.+ ++++.++.++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH--ENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC--CCchheeeEEecCC
Confidence 4679999999999999999998743 3578999998755433 467889999998875 89999999999999
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS-------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 143 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~-------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 143 (475)
..++||||+ +++|.+++...+ ..+++..+..++.||+.||.|||++||+||||||+|||+ +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence 999999999 899999987432 347889999999999999999999999999999999999 477
Q ss_pred CcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCH
Q 011882 144 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 222 (475)
Q Consensus 144 ~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~ 222 (475)
+.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--- 230 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--- 230 (280)
T ss_pred CeEEECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---
Confidence 99999999999765332211 11223356789999999999999999999999999999998 9999976433
Q ss_pred HHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 223 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
...+..+....... ....++.++.+++.+||..||++||++.+|++.|+
T Consensus 231 ~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 231 EEVIECITQGRLLQ----RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 23333333322211 22467899999999999999999999999988875
No 129
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=331.60 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=219.9
Q ss_pred CCccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 2 ~~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
|-.|.+=|.+.+.||+|.|.+|-+|++.-||+.||||++...... ..+..|++.+++++| +||++++.+-..+.
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH--pNiVRLYEViDTQT 90 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH--PNIVRLYEVIDTQT 90 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC--cCeeeeeehhcccc
Confidence 346778899999999999999999999999999999998765432 468899999999998 99999999999999
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..||++|+- +|+|.++|-+....+.+..+.+++.||+.|+.|+|+..+|||||||+||++- .+-|.|||+|||++..
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNK 168 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeecccccc
Confidence 999999999 8899999987777899999999999999999999999999999999999986 5789999999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCC-CchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS-RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s-~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
|.... ...+.||+..|-|||+++|..|+ +++||||||||||-|++|+.||+..++ .+.+-.|...++.
T Consensus 169 f~PG~--------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND---SETLTmImDCKYt 237 (864)
T KOG4717|consen 169 FQPGK--------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND---SETLTMIMDCKYT 237 (864)
T ss_pred CCCcc--------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc---hhhhhhhhccccc
Confidence 76543 23578999999999999999985 689999999999999999999987544 4555666666654
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. +..++.+.++||..||..||.+|.+.++|.
T Consensus 238 v-----PshvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 238 V-----PSHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred C-----chhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 3 345678999999999999999999988764
No 130
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.1e-40 Score=320.11 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=204.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
.++|++.+.||+|+||.||+|.+.. ++..||+|........ ..+..|..+++.+.+ ++++.+.+++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH--QNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC--CCEeeEEEEEccCC
Confidence 5679999999999999999999877 7789999987644322 346778888888765 89999999888888
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEee
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 150 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 150 (475)
..++||||+ |++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||+........+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 899999999 899999987543 2489999999999999999999999999999999999996443445799999
Q ss_pred cCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011882 151 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 229 (475)
Q Consensus 151 FGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i 229 (475)
||+++.+...... ........+..|+|||++.+..++.++|||||||++|||++ |..||.+... ......+
T Consensus 163 fg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~---~~~~~~~ 234 (277)
T cd05036 163 FGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN---QEVMEFV 234 (277)
T ss_pred CccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH
Confidence 9999876332210 11122234578999999999899999999999999999997 9999986433 2222222
Q ss_pred hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 230 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 230 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
..... ......+|.++.+++.+||+.+|++||++.+|++.|+
T Consensus 235 ~~~~~----~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGGGR----LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcCCc----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 22111 1123567899999999999999999999999988775
No 131
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.3e-39 Score=320.79 Aligned_cols=243 Identities=20% Similarity=0.263 Sum_probs=197.1
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.|++.+.||+|+||+||+|.+..+++.||+|++..... ...+..|+.+++.+++ ++++.+.+.+..++..+++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv 78 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS--QFVVNLAYAYETKDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCC--cCceeEEEEEecCCEEEEE
Confidence 48899999999999999999999999999998764321 1235678899988866 8899998888889999999
Q ss_pred EEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||+ ++.+.+||+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCC
Confidence 9999 789988876433 469999999999999999999999999999999999999 46788999999999765332
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.......+.+.... ......
T Consensus 156 ~~--------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~----~~~~~~ 223 (285)
T cd05632 156 ES--------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRV----LETEEV 223 (285)
T ss_pred Cc--------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh----hccccc
Confidence 11 123578999999999999899999999999999999999999998643321111211111 111122
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
+...++.++.+|+..||..||++||+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05632 224 YSAKFSEEAKSICKMLLTKDPKQRLGC 250 (285)
T ss_pred cCccCCHHHHHHHHHHccCCHhHcCCC
Confidence 345678999999999999999999994
No 132
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.2e-39 Score=316.81 Aligned_cols=254 Identities=22% Similarity=0.363 Sum_probs=203.8
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..++|++.++||+|+||.||+|.+..+ ..||||+++.... ...+..|+.+++.+.+ ++++.++.+.. ....++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--EKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCC--CCcceEEEEEC-CCCcEEEE
Confidence 357899999999999999999997655 4699998875433 3467889999998865 88988877654 45679999
Q ss_pred EcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ...+++..++.++.|++.||.|||+.+|+||||||+||+++ +++.+||+|||+++.+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeeccccc
Confidence 999 78999999743 34589999999999999999999999999999999999994 67889999999998664332
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. ......++..|+|||+..+..++.++|||||||++|||++ |..||.+... .+.+..+..... . .
T Consensus 157 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~~~~~~~~~~~~-~---~ 223 (262)
T cd05071 157 YT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQVERGYR-M---P 223 (262)
T ss_pred cc------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---HHHHHHHhcCCC-C---C
Confidence 11 1123356778999999998899999999999999999999 8899976432 233333322111 1 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
....+|..+.+++.+||+.+|++||++.++.++|++.|
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 12457899999999999999999999999999999876
No 133
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-39 Score=319.43 Aligned_cols=258 Identities=24% Similarity=0.329 Sum_probs=209.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEc-----cCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~-----~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
.++|.+.+.||+|+||.||++.+. .++..||+|.+..... ...+..|+.++..++| ++++.+..++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH--EHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCc
Confidence 467999999999999999999853 3456799998765432 2357789888888865 899999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcC------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 145 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 145 (475)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ ++.+.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCCc
Confidence 99999999 889999986432 248999999999999999999999999999999999999 47789
Q ss_pred EEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHH
Q 011882 146 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 224 (475)
Q Consensus 146 vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~ 224 (475)
+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..... ..
T Consensus 159 ~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~ 230 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NE 230 (288)
T ss_pred EEeccCCccccccCCcee-----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HH
Confidence 999999999865432211 11223456788999999999889999999999999999998 9999976432 33
Q ss_pred HHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 225 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.+..+...... .....++.++.+++.+||+.||.+||++.++.+.|+++...
T Consensus 231 ~~~~i~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 231 VIECITQGRVL----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHcCCcC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 33444333221 12345789999999999999999999999999999998754
No 134
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.1e-40 Score=335.65 Aligned_cols=247 Identities=21% Similarity=0.291 Sum_probs=197.0
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+..|..+++.+.| ++++.++..+..+.+.|
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS--PWVVQLFYAFQDDRYLY 119 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC--CCCCeEEEEEEcCCEEE
Confidence 578999999999999999999999999999999875422 12235677788777655 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+||||+ |++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.+..
T Consensus 120 lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCc
Confidence 999999 8899999873 458999999999999999999999999999999999999 4778999999999987643
Q ss_pred cccccccccccCCCCccCccccccccccCCC----CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~----~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
.... ......||+.|+|||++.+.. ++.++|||||||+||||++|..||.+. +....+.++......
T Consensus 195 ~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~---~~~~~~~~i~~~~~~ 265 (371)
T cd05622 195 EGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD---SLVGTYSKIMNHKNS 265 (371)
T ss_pred CCcc------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC---CHHHHHHHHHcCCCc
Confidence 2211 123467999999999997643 789999999999999999999999763 334445555433221
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCC---CCCHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDD---KPDYAYL 270 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~---RPt~~~l 270 (475)
...+. ...++.++.++|..|+. ++.. |+++.+|
T Consensus 266 ~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei 301 (371)
T cd05622 266 LTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEI 301 (371)
T ss_pred ccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHH
Confidence 11111 13578999999999998 5555 5565555
No 135
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.3e-40 Score=318.06 Aligned_cols=253 Identities=19% Similarity=0.282 Sum_probs=201.2
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
...++|++.++||+|+||.||+|.+..+++.||+|++..... ...+..|+.++..+.| ++++.+.+++...+..++
T Consensus 6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h--~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH--CNIVAYFGSYLSREKLWI 83 (267)
T ss_pred CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC--CCeeeeeEEEEeCCEEEE
Confidence 345679999999999999999999999999999999865432 2346678888877765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +..+.+||+|||++..+...
T Consensus 84 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 84 CMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeeccc
Confidence 99999 7899998864 4578999999999999999999999999999999999999 46788999999999866432
Q ss_pred ccccccccccCCCCccCcccccccccc---CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~---g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
.. ......|+..|+|||.+. ...++.++|||||||++|||++|..||...... .....+........
T Consensus 160 ~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~ 229 (267)
T cd06646 160 IA-------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM---RALFLMSKSNFQPP 229 (267)
T ss_pred cc-------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---hhheeeecCCCCCC
Confidence 21 123457899999999885 344788999999999999999999999654321 11111111111111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.......++.++.+++.+||..+|++||++++|++
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 230 KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 11112356889999999999999999999998865
No 136
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.5e-40 Score=316.12 Aligned_cols=250 Identities=26% Similarity=0.440 Sum_probs=201.7
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchH----HHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~----~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
|++++.||+|+||.||++.+..+++.||+|++........ ...|..+++.+.+ ++|+.+..+.......+++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH--PNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB--TTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc--ccccccccccccccccccccc
Confidence 8999999999999999999999999999999887654332 2448889999954 999999999999999999999
Q ss_pred cCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~g~-sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
++.+ +|.+++. ....+++..++.++.||+.||.+||++||+|+||||+|||+ +.++.++|+|||++..+.....
T Consensus 79 ~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~- 153 (260)
T PF00069_consen 79 YCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNE- 153 (260)
T ss_dssp EETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTS-
T ss_pred cccccccccccc-ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccc-
Confidence 9955 9999997 44679999999999999999999999999999999999999 5789999999999986421111
Q ss_pred cccccccCCCCccCcccccccccc-CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 164 QHIPYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~-g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......++..|+|||++. +..++.++||||||+++|+|++|..||...........+.+........... ..
T Consensus 154 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 226 (260)
T PF00069_consen 154 ------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ-QS 226 (260)
T ss_dssp ------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-SH
T ss_pred ------ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-cc
Confidence 123457899999999998 7889999999999999999999999998752222233333222211111000 00
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...+.++.+++..||+.||++||++.++++
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122489999999999999999999888753
No 137
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.4e-39 Score=320.60 Aligned_cols=242 Identities=21% Similarity=0.262 Sum_probs=196.6
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|+.+++.+++ ++++.+...+...+..|+|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv 78 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV 78 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCC--CCeeeeeEEEecCCEEEEE
Confidence 488999999999999999999999999999987643221 235678888888865 8898888888888999999
Q ss_pred EEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ |++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||++ +..+.++|+|||++......
T Consensus 79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCC
Confidence 9999 889998886433 359999999999999999999999999999999999999 46788999999999754332
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. .....||..|+|||++.+..++.++|||||||++|||++|..||.................. ....
T Consensus 156 ~~--------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----~~~~ 223 (285)
T cd05630 156 QT--------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VQEE 223 (285)
T ss_pred cc--------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh----hhhh
Confidence 11 12347899999999999999999999999999999999999999875432222222222111 1112
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCC
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt 266 (475)
+...+++++.+|+.+||+.||++||+
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~R~s 249 (285)
T cd05630 224 YSEKFSPDARSLCKMLLCKDPKERLG 249 (285)
T ss_pred cCccCCHHHHHHHHHHhhcCHHHccC
Confidence 33567899999999999999999999
No 138
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-40 Score=351.18 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=219.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
.+.++.+.||+|+||+||+|+-.. ....||||.++.+... .+|++|++++..|+| +||+++++.+.+++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H--~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH--PNIVRLLGVCREGDP 563 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC--CCeEEEEEEEccCCe
Confidence 456788999999999999998542 3357999998877654 469999999999998 999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcC---------CC----CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCC
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS---------RK----LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 144 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~---------~~----ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 144 (475)
.|+|+||| .|+|.+++.... .. ++..+.+.|+.|||.||+||-++.+|||||-..|+||+ +..
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg---e~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG---ENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec---cce
Confidence 99999999 999999997442 12 88999999999999999999999999999999999995 788
Q ss_pred cEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHH
Q 011882 145 QVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK 223 (475)
Q Consensus 145 ~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~ 223 (475)
.|||+||||++..-..+. |+-...-.-..+||+||.++..+|+.+||||||||+|||+++ |..||.++.. .
T Consensus 641 ~VKIsDfGLsRdiYssDY-----Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---~ 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDY-----YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---Q 712 (774)
T ss_pred EEEecccccchhhhhhhh-----hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---H
Confidence 999999999997655443 222222334679999999999999999999999999999998 9999999654 4
Q ss_pred HHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 224 QKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 224 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
+.++.|....+ -..+.+||.++++|+..||+.+|.+||+|.+|...|++.....
T Consensus 713 EVIe~i~~g~l----L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 713 EVIECIRAGQL----LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHHHcCCc----ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 55555555544 2345789999999999999999999999999999999886543
No 139
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.2e-39 Score=326.66 Aligned_cols=235 Identities=23% Similarity=0.281 Sum_probs=189.4
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHH-HHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAK-LYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~-il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
++||+|+||.||+|++..+++.||||++..... ...+..|.. +++.+. |++|+.++.++...+..|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~--h~~iv~~~~~~~~~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK--HPFLVGLHYSFQTAEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC--CCCccceeeEEEcCCEEEEEEcCC
Confidence 479999999999999999999999998764321 122333433 344444 499999999999999999999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|...+.. ...+++..+..|+.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~--- 151 (321)
T cd05603 79 NGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEE--- 151 (321)
T ss_pred CCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCC---
Confidence 8899887763 4568999999999999999999999999999999999999 5778999999999975432211
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+...... +....
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~ 219 (321)
T cd05603 152 ----TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---VSQMYDNILHKPLQ-----LPGGK 219 (321)
T ss_pred ----ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC---HHHHHHHHhcCCCC-----CCCCC
Confidence 1234579999999999999899999999999999999999999997743 33444444433221 23457
Q ss_pred hHHHHHHHHHHhcCCCCCCCCHH
Q 011882 246 PTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
+.++.+++..||+.||.+||+..
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 220 TVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CHHHHHHHHHHccCCHhhcCCCC
Confidence 88999999999999999999863
No 140
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9e-40 Score=319.96 Aligned_cols=255 Identities=20% Similarity=0.305 Sum_probs=202.6
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEe
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVE 75 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~ 75 (475)
+..++|++.+.||+|+||.||+|.+.. ++..||||+++.... ...+..|+.+++.+.+ ++++.+..++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~--~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC--HHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--CCeeeEEEEEcC
Confidence 456889999999999999999998642 356899998754332 2246678888887765 899999999888
Q ss_pred CCEEEEEEEcC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCc
Q 011882 76 GDYNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 145 (475)
Q Consensus 76 ~~~~~lvme~~-g~sL~~ll~~~~---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 145 (475)
....++||||+ +++|.+++.... ..+++..++.++.|++.||.|||+.|++||||||+|||++ .++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCC
Confidence 89999999999 889999986432 2357888999999999999999999999999999999994 6788
Q ss_pred EEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHH
Q 011882 146 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 224 (475)
Q Consensus 146 vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~ 224 (475)
++|+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+... .+
T Consensus 158 ~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~ 229 (277)
T cd05062 158 VKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQ 229 (277)
T ss_pred EEECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HH
Confidence 999999999865432221 11122356788999999999899999999999999999999 7899976432 22
Q ss_pred HHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 225 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
.+..+...... .+...++..+.+++.+||+.+|++||++.++++.|+
T Consensus 230 ~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 VLRFVMEGGLL----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHcCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 23323222211 223567899999999999999999999999988775
No 141
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.1e-39 Score=323.67 Aligned_cols=255 Identities=18% Similarity=0.234 Sum_probs=192.4
Q ss_pred eeeEeeeCceeEEEEEEc--cCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeE--eCCEEEEEEEcCC
Q 011882 12 GRKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGV--EGDYNVLVIDLLG 87 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~--~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~--~~~~~~lvme~~g 87 (475)
+++||+|+||.||+|.++ .+++.||||.+..........+|+.+++.+.| ++|+.+..++. .....|++|||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKH--PNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCC--CCCcceeeeEecCCCcEEEEEEeccC
Confidence 568999999999999965 46789999998766666678899999999876 89998877664 3567899999999
Q ss_pred CCHHHHHHHcC--------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC-CCCCcEEEeecCCccccc
Q 011882 88 PSLEDLFNFCS--------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 88 ~sL~~ll~~~~--------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGlA~~~~ 158 (475)
++|.+++.... ..+++..+..|+.||+.||.|||++||+||||||+|||+... +..+.+||+|||+|+.+.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 99999876431 248999999999999999999999999999999999999532 345789999999998764
Q ss_pred ccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH------HHHHHHHhh
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK------KQKYEKISE 231 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~------~~~~~~i~~ 231 (475)
.... +........||+.|+|||++.+. .++.++|||||||++|||++|..||........ ...+..+..
T Consensus 164 ~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 164 SPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred CCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 4321 11122356789999999999875 589999999999999999999999975332100 011111110
Q ss_pred c---c----------cc--------------------ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 K---K----------VS--------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 ~---~----------~~--------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. . .. ...+......+.++.+||.+||..||.+|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 0 00 0000001123457889999999999999999998753
No 142
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-39 Score=338.85 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=200.8
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
.+..|.+.++||+|+||.||+|.+..+++.||||... ...+.+|+.+++.++| +||+.++.++..+...++||+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~H--pnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSH--PAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCC--CCCCcEEEEEEECCEEEEEEE
Confidence 4668999999999999999999999999999999632 2346789999999876 999999999999999999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 85 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 85 ~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
++.++|.+++......+++.+++.|+.||+.||.|||++|||||||||+|||| +..+.+||+|||+++.+......
T Consensus 241 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~~~~- 316 (461)
T PHA03211 241 KYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARGSWST- 316 (461)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceeccccccc-
Confidence 99889999887655679999999999999999999999999999999999999 46788999999999876432211
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC-----CHHHHHHHHhhcccc----
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISEKKVS---- 235 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~-----~~~~~~~~i~~~~~~---- 235 (475)
.......||..|+|||++.+..++.++|||||||+||||++|..|+...... ...+....+......
T Consensus 317 ----~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 317 ----PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ----ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 0122457999999999999999999999999999999999987765432211 111222221111100
Q ss_pred -c-------------------------cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 236 -T-------------------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 236 -~-------------------------~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. ....+ ..++.++.+||.+||..||.+||++.+|++
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY-YKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhh-ccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 00001 134568999999999999999999988854
No 143
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-39 Score=321.30 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=209.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
.++|.+.+.||+|+||.||+|.+.. ++..|++|.+...... ..+.+|+.++..+.+ ++++.+.+++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~ 81 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH--EHIVKFYGVCGDGDP 81 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC--CCcceEEEEEccCCc
Confidence 4679999999999999999998543 4567999987654432 357788888888765 999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 142 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 142 (475)
.++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---cc
Confidence 99999999 899999986432 348999999999999999999999999999999999999 47
Q ss_pred CCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 011882 143 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 221 (475)
Q Consensus 143 ~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~ 221 (475)
++.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-- 231 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-- 231 (291)
T ss_pred CCcEEECCCCcccccCCCcee-----ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 789999999999865432211 11233467889999999999999999999999999999998 9999976433
Q ss_pred HHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 222 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 222 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
...+..+...... .....+|..+.+++.+||..+|++||++.+|++.|+++...
T Consensus 232 -~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 232 -TEVIECITQGRVL----ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHHHHHhCCCCC----CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 2333333332221 12345789999999999999999999999999999998654
No 144
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=338.20 Aligned_cols=251 Identities=23% Similarity=0.329 Sum_probs=209.6
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPS 89 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~s 89 (475)
-+||+|.||+||-|+|..|...+|||-+..+.. ..-+..|+.+...|+| .||+++.+.+.++++.-|.||-. ||+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrH--kNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRH--KNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhh--HhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 369999999999999999999999997655433 2448899999999988 89999999998999999999998 999
Q ss_pred HHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccc
Q 011882 90 LEDLFNFCSRKL--SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 167 (475)
Q Consensus 90 L~~ll~~~~~~l--s~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~ 167 (475)
|.+++...-+++ ++.++-.+..||++||.|||++.|||||||-+||||. .-.|.+||+|||-++.+-.-..
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP----- 731 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINP----- 731 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCc-----
Confidence 999998777777 8899999999999999999999999999999999996 4578999999999987654322
Q ss_pred cccCCCCccCccccccccccCCC--CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 168 YRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~~--~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
...+++||..|||||++..++ |+.++|||||||++.||.||++||..+... ...+.++..-+..++++ ..+
T Consensus 732 --~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp--qAAMFkVGmyKvHP~iP---eel 804 (1226)
T KOG4279|consen 732 --CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP--QAAMFKVGMYKVHPPIP---EEL 804 (1226)
T ss_pred --cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh--hHhhhhhcceecCCCCc---HHH
Confidence 346789999999999998665 899999999999999999999999876542 22333444434444333 445
Q ss_pred hHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 246 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
+.+.+.+|.+|+..||.+||++.+| |.+.|.+-+
T Consensus 805 saeak~FilrcFepd~~~R~sA~~L---L~DpFlq~~ 838 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDL---LQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHh---ccCcccccC
Confidence 7889999999999999999998877 666665443
No 145
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2e-39 Score=318.48 Aligned_cols=258 Identities=22% Similarity=0.301 Sum_probs=199.5
Q ss_pred Cce-EEeeeEeeeCceeEEEEEE----ccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEe--C
Q 011882 7 NKF-RLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVE--G 76 (475)
Q Consensus 7 ~~y-~l~~~LG~G~fG~Vy~a~~----~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~--~ 76 (475)
++| ++.+.||+|+||+||++.. ..+++.||+|++..... ...+.+|+++++.+.| ++++.+..++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH--ENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCC
Confidence 455 9999999999999988653 35678999999875432 2456789899888865 899998877654 3
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
...+++|||+ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~ 155 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAK 155 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeeccccc
Confidence 5689999999 8899999874 469999999999999999999999999999999999999 467889999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHH-----------H
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-----------Q 224 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~-----------~ 224 (475)
.+...... +.......++..|+|||++.+..++.++|||||||++|||++|..||......... .
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05080 156 AVPEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVV 231 (283)
T ss_pred ccCCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchh
Confidence 76542211 11112234667799999999888999999999999999999999998653221000 0
Q ss_pred HHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 225 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
.+.......... .....+|.++.+++.+||+.+|++||++++|++.|+++.
T Consensus 232 ~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMRL---PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCCC---CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 000000000000 112457899999999999999999999999999998763
No 146
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-39 Score=321.13 Aligned_cols=256 Identities=17% Similarity=0.309 Sum_probs=204.6
Q ss_pred ceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
+|++.+.||+|+||.||+|.+.. ....|++|++...... ..+..|+.++..+.| ++++.+.+.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH--PHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC--CCEeeEEEEEecCCCc
Confidence 58899999999999999998753 2357999987654432 357778888888865 8999999999989999
Q ss_pred EEEEEcC-CCCHHHHHHHcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 011882 80 VLVIDLL-GPSLEDLFNFCS-----------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 135 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~-----------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NI 135 (475)
+++|||+ +++|.+++.... ..+++..++.++.|++.||.|||+++|+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999 789999886421 2478999999999999999999999999999999999
Q ss_pred EEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCC
Q 011882 136 LMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPW 214 (475)
Q Consensus 136 Ll~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf 214 (475)
|+ ++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 159 ll---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 159 LV---AEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred EE---cCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 99 46789999999999865433221 11123356778999999998889999999999999999998 99999
Q ss_pred CCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 215 QGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 215 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.+... .+ +........... ....++.++.+++..||+.+|++||++.++++.|++++.+
T Consensus 231 ~~~~~---~~-~~~~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 231 PGIAP---ER-LFNLLKTGYRME---RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCCH---HH-HHHHHhCCCCCC---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 76432 22 222222111111 2346789999999999999999999999999999998754
No 147
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.5e-39 Score=320.57 Aligned_cols=257 Identities=19% Similarity=0.272 Sum_probs=205.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCe--EEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~--~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||+|.+..++. .+++|.++.... ...+..|+.++..+.+ |++++.++.++......++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~-hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH-HPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcC-CCchhheEEEEccCCcceE
Confidence 579999999999999999999877765 478887764322 2356778888888753 4999999999988899999
Q ss_pred EEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCc
Q 011882 82 VIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 145 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 145 (475)
+|||+ +++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||+ +.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCCe
Confidence 99999 789999986432 248899999999999999999999999999999999999 46788
Q ss_pred EEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHH
Q 011882 146 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 224 (475)
Q Consensus 146 vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~ 224 (475)
+||+|||++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||.+... ..
T Consensus 158 ~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~ 226 (297)
T cd05089 158 SKIADFGLSRGEEVYVK--------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AE 226 (297)
T ss_pred EEECCcCCCccccceec--------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HH
Confidence 99999999864321111 111233567999999999889999999999999999997 9999976433 22
Q ss_pred HHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 225 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
.+..+..... ......++.++.+|+.+||..+|.+||+++++++.|..++....
T Consensus 227 ~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 227 LYEKLPQGYR----MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHHHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 2333322111 11224578999999999999999999999999999999887654
No 148
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.5e-39 Score=316.46 Aligned_cols=253 Identities=21% Similarity=0.243 Sum_probs=200.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.+.| ++++.++++...+...|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH--PNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC--CCEeeeEEEEeeCCeEEEEE
Confidence 58999999999999999999988999999998764322 2457788889888875 99999999999999999999
Q ss_pred EcCCCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLLGPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~g~sL~~ll~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCCc
Confidence 999889988886433 468999999999999999999999999999999999999 477899999999997653321
Q ss_pred cccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH-----------
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI----------- 229 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i----------- 229 (475)
. ......++..|+|||++.+. .++.++|||||||++|+|++|..||.+.............
T Consensus 156 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd07861 156 R-------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228 (285)
T ss_pred c-------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence 1 11233678899999998765 4789999999999999999999999764321111111000
Q ss_pred ----------hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 230 ----------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 230 ----------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...............+++++.++|.+||..||++||++.+|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000011112223457899999999999999999999888753
No 149
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.2e-40 Score=329.93 Aligned_cols=236 Identities=21% Similarity=0.260 Sum_probs=189.8
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHH-HHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKL-YKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~i-l~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
+.||+|+||+||+|.+..+|+.||||++..... ...+..|..+ ++.+. |++|+.++..+...+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~--hp~iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTTEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC--CCCCccEEEEEecCCEEEEEEcCC
Confidence 479999999999999999999999998864321 1223344433 33333 499999999999999999999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~--- 151 (325)
T cd05604 79 NGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSD--- 151 (325)
T ss_pred CCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCC---
Confidence 8899888763 5579999999999999999999999999999999999999 5778999999999975432211
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
......||..|+|||++.+..++.++|||||||+||||++|..||.... ..+.+..+..... .+...+
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~ 219 (325)
T cd05604 152 ----TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD---VAEMYDNILHKPL-----VLRPGA 219 (325)
T ss_pred ----CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC---HHHHHHHHHcCCc-----cCCCCC
Confidence 1234579999999999999999999999999999999999999997643 3334444433322 123457
Q ss_pred hHHHHHHHHHHhcCCCCCCCCHHH
Q 011882 246 PTEFASYFHYCRSLRFDDKPDYAY 269 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RPt~~~ 269 (475)
+.++.+++..|+..+|.+||++.+
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCCCC
Confidence 889999999999999999999753
No 150
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.9e-40 Score=320.46 Aligned_cols=253 Identities=21% Similarity=0.249 Sum_probs=204.3
Q ss_pred CceEEeeeEeeeCceeEEEEEEccC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~-----~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
.+|++.++||+|+||.||+|.+..+ ++.||||+++..... ..+..|..++..++| ++|+.++.+......
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h--~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH--PNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC--CCcCeEEEEEcCCCc
Confidence 4688999999999999999987543 578999998755432 346678878777765 899999999998899
Q ss_pred EEEEEEcC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC
Q 011882 79 NVLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 142 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~---------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 142 (475)
.++++||+ +++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||+ ++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---FD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---cC
Confidence 99999999 78999988521 2348889999999999999999999999999999999999 46
Q ss_pred CCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 011882 143 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 221 (475)
Q Consensus 143 ~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~ 221 (475)
++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-- 232 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYY-----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-- 232 (283)
T ss_pred CCceEecccccccccccchhe-----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 788999999999865432211 11223456789999999998889999999999999999998 8899977432
Q ss_pred HHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 222 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 222 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
.+.+..+...... .+...+|.++.+++.+||+.+|++||++.+|+..|+.
T Consensus 233 -~~~~~~i~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 -QDVIEMIRNRQVL----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 3344444443322 2345789999999999999999999999999988763
No 151
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-39 Score=314.93 Aligned_cols=248 Identities=21% Similarity=0.324 Sum_probs=196.9
Q ss_pred eEeeeCceeEEEEEEc--cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-C
Q 011882 14 KIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-G 87 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~--~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g 87 (475)
.||+|+||.||+|.+. .++..||||++...... ..+.+|+.+++.+.| ++++.+..++. ....++||||+ +
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN--PYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC--CCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 4899999999999865 44567999988655332 347789999998865 88999887764 45679999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccc
Q 011882 88 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 167 (475)
Q Consensus 88 ~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~ 167 (475)
++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.......
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~--- 152 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYY--- 152 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCccce---
Confidence 89999987656679999999999999999999999999999999999999 467889999999998654332110
Q ss_pred cccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 168 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... .....+..... ..+...++
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~----~~~~~~~~ 224 (257)
T cd05115 153 -KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVMSFIEQGKR----LDCPAECP 224 (257)
T ss_pred -eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCC----CCCCCCCC
Confidence 11112234678999999998889999999999999999996 99999875432 22222222211 11234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
+++.+++.+||..+|++||++.+|.+.|+.++
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 99999999999999999999999999998764
No 152
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2e-39 Score=315.78 Aligned_cols=256 Identities=16% Similarity=0.268 Sum_probs=206.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCe---EEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~---~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
.++|++.+.||+|+||.||+|.+..++. .||+|.++..... ..+..|..++..++| +++++++.++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH--PNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCcc
Confidence 4689999999999999999999865543 7999987654322 356778888887764 9999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
+++|||+ +++|.+++......+++.+++.|+.||+.||.|||++||+||||||+|||+ +.++.++|+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence 9999999 789999998666679999999999999999999999999999999999999 467899999999998765
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
...... .......++..|++||++.+..++.++|||||||++||+++ |..||.+... .+.+..+..... .
T Consensus 158 ~~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~~~~-~- 228 (267)
T cd05066 158 DDPEAA----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVIKAIEEGYR-L- 228 (267)
T ss_pred ccccee----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---HHHHHHHhCCCc-C-
Confidence 432211 01112234678999999999899999999999999999886 9999977543 222333332211 1
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
.....+|..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 --PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11245789999999999999999999999999998875
No 153
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.8e-39 Score=313.47 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=206.0
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
.++|++.+.||+|+||.||+|.+ .+++.||||.++.... ..++..|+.+++.++| ++++.++.++...+..+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLW-NNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH--PKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEe-cCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC--CCccceeEEEecCCCeeeeee
Confidence 46799999999999999999996 4567899998865433 3467889999998875 899999999998999999999
Q ss_pred cC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||++ +..+.+||+|||+++.+.....
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEccCCcc
Confidence 99 999999987543 468999999999999999999999999999999999999 4678899999999987753221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+... .+.+..+..... .. .
T Consensus 159 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~~-~~---~ 225 (261)
T cd05068 159 E------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQVDQGYR-MP---C 225 (261)
T ss_pred c------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCC-CC---C
Confidence 1 1112233568999999999899999999999999999999 9999977432 223333322211 11 1
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
...++..+.+++.+||..+|++||++.+|.+.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 245789999999999999999999999999988753
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-39 Score=321.40 Aligned_cols=261 Identities=19% Similarity=0.314 Sum_probs=207.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-------CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEe
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVE 75 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-------~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~ 75 (475)
.++|.+.+.||+|+||.||+|.+.. +...||+|++...... ..+..|..++..+.. |++++.+..++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~-h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEec
Confidence 4789999999999999999998643 2357999998754322 246678888887743 3899999999999
Q ss_pred CCEEEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEee
Q 011882 76 GDYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 139 (475)
Q Consensus 76 ~~~~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~ 139 (475)
.+..|+||||+ +++|.+++.... ..+++.+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-- 173 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-- 173 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE--
Confidence 99999999999 789999997532 248899999999999999999999999999999999999
Q ss_pred CCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCC
Q 011882 140 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLK 218 (475)
Q Consensus 140 ~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~ 218 (475)
+.++.+||+|||+++.+....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 174 -~~~~~~kL~dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 174 -TEDNVMKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred -cCCCcEEECCCcccccccccchhh-----ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 467899999999997654321100 1112234578999999999889999999999999999998 899997633
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 219 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
. .+....+..... ......++.++.+++.+||..+|++||++.+|++.|++++...+
T Consensus 248 ~---~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 248 V---EELFKLLKEGHR----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred H---HHHHHHHHcCCC----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 2 222223222211 11234578999999999999999999999999999999987654
No 155
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-39 Score=313.10 Aligned_cols=246 Identities=20% Similarity=0.313 Sum_probs=197.0
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
++||+|+||.||+|.+..+++.||+|....... ...+..|.++++.+.| ++++.+.+++......++||||+ ++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH--PNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC--CCcceEEEEEcCCCCeEEEEeeccCC
Confidence 479999999999999999999999998654322 2357889888888865 99999999999999999999999 88
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
+|.+++......+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..........
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~---- 151 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYAS---- 151 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccc----
Confidence 9999987555568999999999999999999999999999999999999 467889999999997644321100
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 247 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 247 (475)
......++..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.. .... .....++.
T Consensus 152 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~ 223 (252)
T cd05084 152 -TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---QTREAIEQ-GVRL---PCPELCPD 223 (252)
T ss_pred -cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH---HHHHHHHc-CCCC---CCcccCCH
Confidence 0011123567999999999889999999999999999997 99999764321 11222211 1111 12345689
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 248 EFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 248 ~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
++.+++.+||..+|++||++.+|.+.|+
T Consensus 224 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 224 AVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 9999999999999999999999988775
No 156
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-38 Score=350.17 Aligned_cols=253 Identities=20% Similarity=0.288 Sum_probs=200.5
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeE--eC
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGV--EG 76 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~--~~ 76 (475)
+...++|+++++||+|+||.||+|.+..+++.||+|++..... ...+..|+.++..|.| ++|+.++.++. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~H--PNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH--KNIVRYIDRFLNKAN 86 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCC--CCcCeEEEEEEecCC
Confidence 3456899999999999999999999999999999998865432 2357789999998876 88999877654 34
Q ss_pred CEEEEEEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCcEEEeeC-----
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK-------SFLHRDIKPDNFLMGLG----- 140 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~-------gIvHrDIKP~NILl~~~----- 140 (475)
...||||||+ +++|.+++... ...+++..++.|+.||+.||.|||+. +||||||||+||||..+
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 6789999999 88999998743 34699999999999999999999984 49999999999999632
Q ss_pred ---------CCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccC--CCCCCchhHHHHHHHHHHHHc
Q 011882 141 ---------RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLR 209 (475)
Q Consensus 141 ---------~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g--~~~s~ksDIwSlG~iL~ellt 209 (475)
+....+||+|||+++.+..... .....||+.|+|||++.+ ..++.++||||||||||||++
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESM--------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cccccccccCCCCceEEccCCcccccccccc--------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 1234599999999986543221 134579999999999865 348899999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 210 GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 210 G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
|..||..... ..+.+..+.... .. ....++.++.+||..||..+|.+||++.+++.
T Consensus 239 Gk~PF~~~~~--~~qli~~lk~~p-~l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 239 GKTPFHKANN--FSQLISELKRGP-DL----PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCCcCCc--HHHHHHHHhcCC-CC----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999976432 223333222211 11 12456899999999999999999999888753
No 157
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-39 Score=330.27 Aligned_cols=249 Identities=18% Similarity=0.240 Sum_probs=195.1
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
..+|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+++.++| ++|+.++.++......++|||+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNH--PSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCC--CCCcChhheEEeCCeeEEEEEc
Confidence 45799999999999999999999999999999975332 34568888888876 8999999999999999999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 86 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 86 ~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+.++|.+++......+++..++.|+.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.......
T Consensus 139 ~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~--- 212 (357)
T PHA03209 139 YSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAPA--- 212 (357)
T ss_pred cCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCcc---
Confidence 9999999887666779999999999999999999999999999999999999 5778899999999975332111
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHH-------HHHHHHhhc-c----
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-------QKYEKISEK-K---- 233 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~-------~~~~~i~~~-~---- 233 (475)
.....||..|+|||++.+..++.++|||||||+||||+++..|+......... ..+..+... .
T Consensus 213 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 213 -----FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred -----cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 12457999999999999999999999999999999999865554332211100 011111100 0
Q ss_pred -cc-----ccHH-----------------HH-hcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 234 -VS-----TSIE-----------------AL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 234 -~~-----~~~~-----------------~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.. .... .+ ...++.++.+||.+||..||.+||++.+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l 349 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL 349 (357)
T ss_pred hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence 00 0000 00 124567788899999999999999998874
No 158
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2e-39 Score=315.76 Aligned_cols=252 Identities=19% Similarity=0.364 Sum_probs=200.8
Q ss_pred eEEeeeEeeeCceeEEEEEEccC---CeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE---
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY--- 78 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~---~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~--- 78 (475)
|++.+.||+|+||.||+|.+..+ +..||||+++..... ..+..|.++++.+.| ++++.++.+......
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH--PNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC--CCeeeEEeeeccCCcccc
Confidence 67899999999999999987654 478999988754332 346778888887765 889998877655443
Q ss_pred ---EEEEEEcC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 79 ---NVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 79 ---~~lvme~~-g~sL~~ll~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
.+++|||+ +++|..++... ...+++..++.++.||+.||.|||+++|+||||||+||++ ++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence 79999999 88999887532 2358999999999999999999999999999999999999 577899999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~ 228 (475)
|||+++.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.+..
T Consensus 156 dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~ 227 (273)
T cd05035 156 DFGLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDY 227 (273)
T ss_pred Cccceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH
Confidence 99999876543221 11122345778999999998889999999999999999999 9999976432 233333
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
+...... .....++.++.+++.+||..||++||++.+|++.|+++
T Consensus 228 ~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 LRHGNRL----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHcCCCC----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3322211 12356789999999999999999999999999999876
No 159
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.5e-39 Score=312.06 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=205.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
++|++.+.||.|+||.||+|.+..+++.|++|++..... ...+..|..+++.++| ++++.++++.......|++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH--PNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC--CChhceEEEEEeCCEEEEEEe
Confidence 689999999999999999999988999999998875432 3457888888888765 999999999999999999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|+ +++|.+++......+++.++..++.|++.||.|||++||+|+||||+||++ ++.+.+||+|||++..+.....
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhhhhh-
Confidence 99 779999987655689999999999999999999999999999999999999 4778899999999986654221
Q ss_pred cccccccCCCCccCccccccccccCC---CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~---~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
......++..|+|||.+.+. .++.++|||||||++|||++|..||..... .+....+...........
T Consensus 157 ------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 227 (262)
T cd06613 157 ------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP---MRALFLISKSNFPPPKLK 227 (262)
T ss_pred ------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhccCCCcccc
Confidence 12345789999999999877 789999999999999999999999976432 222222222211111111
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
....++.++.+++.+||..+|.+||++.+|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 22346788999999999999999999988853
No 160
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.6e-39 Score=311.43 Aligned_cols=246 Identities=21% Similarity=0.265 Sum_probs=203.1
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+|++.++||.|+||.||++.+..+++.||+|.++.... ...+..|..+++.++| ++++.+...+...+..|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH--PNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC--CCcceEEEEEEECCEEEEEEe
Confidence 58999999999999999999999999999998764332 2456778888887765 899999999999999999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||+ ++.+.++|+|||++..+.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeeccccc
Confidence 99 88999988643 3458999999999999999999999999999999999999 5778999999999976644321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|+..|+|||++.+..++.++||||||+++|+|++|..||.... ....+..+...... .+.
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~----~~~ 221 (255)
T cd08219 156 -------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS---WKNLILKVCQGSYK----PLP 221 (255)
T ss_pred -------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC---HHHHHHHHhcCCCC----CCC
Confidence 1234578999999999999889999999999999999999999997632 22333333322221 123
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..++..+.+++.+||+.||++||++.+|+.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 222 SHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred cccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 456789999999999999999999998864
No 161
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.3e-39 Score=311.16 Aligned_cols=255 Identities=23% Similarity=0.334 Sum_probs=208.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+..|+++++.+.+ ++++.++.++...+..++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~--~~i~~~~~~~~~~~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH--PNVIKYLASFIENNELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC--CCeeeeeeeeecCCeEEE
Confidence 68999999999999999999998899999999875322 13457788888888865 889999988888999999
Q ss_pred EEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 82 VIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
+|||+ +++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+||++ +.++.++|+|||++..+
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeec
Confidence 99999 78999988643 3458999999999999999999999999999999999999 46788999999999765
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
..... ......|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ........+........
T Consensus 157 ~~~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~ 228 (267)
T cd08224 157 SSKTT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEKCDYPPL 228 (267)
T ss_pred cCCCc-------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHhhhhcCCCCCC
Confidence 43221 11234688999999999998899999999999999999999999976432 22222222222222111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
+ ...++.++.+++.+||..+|++||++.+|++.|+++
T Consensus 229 -~--~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 229 -P--ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred -C--hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 1 125678999999999999999999999999999876
No 162
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-39 Score=321.95 Aligned_cols=257 Identities=19% Similarity=0.294 Sum_probs=203.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCC----------------eEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----------------EEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGI 66 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~----------------~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i 66 (475)
.++|+++++||+|+||.||+|.+..++ ..||+|++...... ..+..|+.++..+.+ +++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD--PNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC--CCE
Confidence 468999999999999999999876544 56899988755432 356778999998875 899
Q ss_pred CeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 011882 67 PNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 135 (475)
Q Consensus 67 ~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NI 135 (475)
+.+..++..+...+++||++ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 99999998889999999999 889999987543 2689999999999999999999999999999999999
Q ss_pred EEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc--CCCC
Q 011882 136 LMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLP 213 (475)
Q Consensus 136 Ll~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt--G~~P 213 (475)
+++ ..+.++|+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 162 li~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 233 (296)
T cd05051 162 LVG---KNYTIKIADFGMSRNLYSSDYY-----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQP 233 (296)
T ss_pred eec---CCCceEEccccceeecccCcce-----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCC
Confidence 994 6689999999999865433211 11223456789999999998889999999999999999998 7788
Q ss_pred CCCCCCCCHHHHHHHHhhc---cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 214 WQGLKAGTKKQKYEKISEK---KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 214 f~~~~~~~~~~~~~~i~~~---~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
|..... .+.+..+... ............+|.++.+++.+||+.||++||++.+|.+.|+
T Consensus 234 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 234 YEHLTD---QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCcCh---HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 876432 2222222221 0000001112456789999999999999999999999988775
No 163
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.7e-39 Score=314.60 Aligned_cols=249 Identities=18% Similarity=0.269 Sum_probs=202.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
++|++.+.||+|+||.||+|.+. .+..||||.+..... ...+..|..+++.+.| ++++.+++++......+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH--EKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC--CCeeeEEEEEccCCCcEEEEEc
Confidence 57999999999999999999864 445699998765432 3467889888888865 9999999999888899999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDEY-- 155 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCCce--
Confidence 9 789999997655579999999999999999999999999999999999999 4678999999999986543221
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
.......++..|++||++.+..++.++|||||||++|||++ |..||..... ......+....... ...
T Consensus 156 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~----~~~ 224 (256)
T cd05113 156 ----TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVEKVSQGLRLY----RPH 224 (256)
T ss_pred ----eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHhcCCCCC----CCC
Confidence 11123346778999999998889999999999999999998 9999976443 22233333322111 123
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
..+.++.+++.+||..+|++||++.+|++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 4678999999999999999999999998765
No 164
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.9e-39 Score=313.86 Aligned_cols=246 Identities=21% Similarity=0.327 Sum_probs=200.9
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeE-eCCEEEEEEEc
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGV-EGDYNVLVIDL 85 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~-~~~~~~lvme~ 85 (475)
.+|++.+.||+|+||.||++.. .+..||+|.++.......+..|+.+++.+.+ ++++.+.++.. .....+++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRH--SNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCC--CCeeeEEEEEEcCCCceEEEEEC
Confidence 5799999999999999999975 5888999998766555678889999998875 88888877654 55678999999
Q ss_pred C-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 86 L-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
+ +++|.+++..... .+++..++.++.||+.||.|||++||+||||||+||++ ++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceeccccC--
Confidence 9 7899999875433 48999999999999999999999999999999999999 477899999999997654322
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
....++..|+|||++.+..++.++|||||||++|||++ |..||..... .+....+.... . ..+.
T Consensus 157 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~~-~---~~~~ 221 (256)
T cd05082 157 --------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKGY-K---MDAP 221 (256)
T ss_pred --------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCC-C---CCCC
Confidence 12345678999999999889999999999999999997 9999976322 22222222211 1 1123
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
..+|+.+.+++.+||..+|++||++.++.+.|++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 5678999999999999999999999999988875
No 165
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.6e-39 Score=313.50 Aligned_cols=253 Identities=21% Similarity=0.369 Sum_probs=204.0
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+..++|+++++||+|+||.||+|.+ .+++.||+|.+..... ...+..|..+++.+++ ++++.+..+. ..+..+++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~-~~~~~~~v 78 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQH--PRLVRLYAVV-TQEPIYII 78 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCC--cCeeeEEEEE-ccCCcEEE
Confidence 3467899999999999999999985 5678899998775443 3467889999998875 8888888775 44568999
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++.+++.++.|++.||+|||+.||+||||||+||++ ++++.++|+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecCCC
Confidence 9999 88999988643 3468999999999999999999999999999999999999 47789999999999876532
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+... ......+..... .
T Consensus 156 ~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~-~--- 222 (260)
T cd05067 156 EYT------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEVIQNLERGYR-M--- 222 (260)
T ss_pred Ccc------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHcCCC-C---
Confidence 211 1123356788999999998889999999999999999998 9999986443 222222222211 1
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
.....+|.++.+++.+||..+|++||++++|..+|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1234578899999999999999999999999998875
No 166
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.4e-39 Score=310.28 Aligned_cols=246 Identities=24% Similarity=0.306 Sum_probs=204.3
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||+|+||.||+|.+..+++.|++|.+.... ....+..|+++++.++| ++++.+..++...+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS--SYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC--CCeehheeeeccCCEEEEEE
Confidence 5899999999999999999999999999999876432 22346678888887765 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||+++.+....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCcc
Confidence 999 88999998754 45699999999999999999999999999999999999994 67899999999998765432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......|++.|+|||++.+..++.++|||||||++|+|++|..||.... .......+....... +
T Consensus 156 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~----~ 221 (256)
T cd08529 156 N-------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILKIIRGVFPP----V 221 (256)
T ss_pred c-------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCCCC----C
Confidence 2 1234578899999999999999999999999999999999999997643 233333333322221 2
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.++.+++.+||+.+|++||++.+|++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 222 SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 2357899999999999999999999988854
No 167
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-39 Score=313.43 Aligned_cols=247 Identities=20% Similarity=0.331 Sum_probs=196.0
Q ss_pred eeEeeeCceeEEEEEE--ccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTN--IQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~--~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
++||+|+||.||+|.+ ..+++.||||+++..... ..+..|+.++..+.+ ++++.+.+++. .+..++||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~-~~~~~lv~e~~ 77 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN--PYIVRMIGICE-AESWMLVMELA 77 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC--CCcceEEEEEc-CCCcEEEEecC
Confidence 3689999999999965 457789999998755433 346778888888765 89999887765 45668999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||.|||+ +.++.+||+|||+++.+.......
T Consensus 78 ~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~- 152 (257)
T cd05116 78 ELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYY- 152 (257)
T ss_pred CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCee-
Confidence 7899999874 4569999999999999999999999999999999999999 467889999999998764432211
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+...... .+...
T Consensus 153 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~i~~~~~~----~~~~~ 222 (257)
T cd05116 153 ---KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NEVTQMIESGERM----ECPQR 222 (257)
T ss_pred ---eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHCCCCC----CCCCC
Confidence 11122345678999999988889999999999999999998 9999976433 2233333322211 13356
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
+++++.++|.+||..||++||++++|.+.|+..
T Consensus 223 ~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 223 CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 889999999999999999999999999988764
No 168
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.5e-39 Score=313.21 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=202.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.+|++.+.||+|+||.||+|.+. ++..+|||++..... ...+..|+++++.+.+ ++++.+++++......++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH--PNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCC--CCEEEEEEEEcCCCceEEEEec
Confidence 56999999999999999999875 567899998765433 3457789999888865 8999999998888999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..++.|+.||+.||.|||++||+||||||+||++ +.++.+||+|||+++...+....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~~~~- 156 (256)
T cd05059 81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQYT- 156 (256)
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceeccccccc-
Confidence 9 889999987655679999999999999999999999999999999999999 47788999999999865432211
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+..... . ....
T Consensus 157 -----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~-~---~~~~ 224 (256)
T cd05059 157 -----SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEVVESVSAGYR-L---YRPK 224 (256)
T ss_pred -----ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHHHHHHHcCCc-C---CCCC
Confidence 1112234568999999999899999999999999999999 8999976433 233333322211 1 1224
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
.+|.++.+++.+||..+|++||++.++++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 225 LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 5789999999999999999999999998765
No 169
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5e-39 Score=315.03 Aligned_cols=262 Identities=19% Similarity=0.261 Sum_probs=209.7
Q ss_pred CCCccCCceEEeeeEeeeCceeEEEEEEccCCe----EEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEee
Q 011882 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFG 73 (475)
Q Consensus 1 m~~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~----~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~ 73 (475)
|......+|++.++||+|+||.||+|.++.+++ .||+|.+...... ..+.+|+.++..+.| ++++.+..++
T Consensus 1 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~ 78 (279)
T cd05057 1 LRILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH--PHVVRLLGIC 78 (279)
T ss_pred CcccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC--CCcceEEEEE
Confidence 445667899999999999999999999877665 6899987655432 346678888887765 8999998887
Q ss_pred EeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 74 VEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 74 ~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
.. ...++||||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +..+.+||+|||
T Consensus 79 ~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg 154 (279)
T cd05057 79 LS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFG 154 (279)
T ss_pred ec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCc
Confidence 76 7789999999 889999998666679999999999999999999999999999999999999 467889999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhh
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
+++.+....... ......++..|+|||.+.+..++.++|||||||++||+++ |..||.+.... +....+..
T Consensus 155 ~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~ 226 (279)
T cd05057 155 LAKLLDVDEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPDLLEK 226 (279)
T ss_pred ccccccCcccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHhC
Confidence 998765322211 0112234678999999988889999999999999999998 99999875432 22222222
Q ss_pred ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 232 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 232 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
... . .....++..+.+++.+||..+|.+||++.+|++.|.+++.+
T Consensus 227 ~~~-~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 227 GER-L---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCC-C---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 111 1 11234678899999999999999999999999999998653
No 170
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-40 Score=304.30 Aligned_cols=244 Identities=23% Similarity=0.315 Sum_probs=211.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|++++.||.|-||.||+|+.++++-.||+|++-.. ....++.+|++|...|+| |||.+++.++.+....|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h--pnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH--PNILRLYGYFHDSKRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC--ccHHhhhhheeccceeE
Confidence 57899999999999999999999999999999986433 234568899999888887 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 81 LVIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|++||. +|.|...+.. ...+|++.....++.|++.||.|+|.++||||||||+|+|++ ..+.+||+|||.+....
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCCCceeecC
Confidence 999999 7777777763 345699999999999999999999999999999999999995 78899999999986543
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.. ...++|||..|.+||+..+..++..+|+|++|++.|||+.|..||.... ..+.|.+|.......+
T Consensus 176 ~~---------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k~~~~~p- 242 (281)
T KOG0580|consen 176 SN---------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRKVDLKFP- 242 (281)
T ss_pred CC---------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHHccccCC-
Confidence 21 2367899999999999999999999999999999999999999997743 5667777766655432
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..++.+..++|.+|+..+|.+|....+++
T Consensus 243 ----~~is~~a~dlI~~ll~~~p~~r~~l~~v~ 271 (281)
T KOG0580|consen 243 ----STISGGAADLISRLLVKNPIERLALTEVM 271 (281)
T ss_pred ----cccChhHHHHHHHHhccCccccccHHHHh
Confidence 67889999999999999999999976663
No 171
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.8e-39 Score=321.36 Aligned_cols=258 Identities=20% Similarity=0.262 Sum_probs=204.0
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeE--EEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEE--VAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~--vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
-++|++.+.||+|+||.||+|.+..++.. +|+|.++.... ...+.+|++++..+.+ |++++.+++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~-h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH-HPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcC-CCCcceEEEEECCCCCce
Confidence 36899999999999999999998877764 56766543221 2346778888888843 399999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCC
Q 011882 81 LVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 144 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 144 (475)
+||||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||+ +.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCC
Confidence 999999 889999986432 257899999999999999999999999999999999999 4678
Q ss_pred cEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHH
Q 011882 145 QVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK 223 (475)
Q Consensus 145 ~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~ 223 (475)
.+||+|||+++...... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus 162 ~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--- 230 (303)
T cd05088 162 VAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--- 230 (303)
T ss_pred cEEeCccccCcccchhh--------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---
Confidence 99999999986432110 1112234678999999988889999999999999999998 99999764432
Q ss_pred HHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 224 QKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 224 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
+.+..+..... ......++.++.+++.+||..+|++||++.+++..|..++....
T Consensus 231 ~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 231 ELYEKLPQGYR----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHHHhcCCc----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 22222221110 11223468899999999999999999999999999998876553
No 172
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.1e-39 Score=314.66 Aligned_cols=252 Identities=19% Similarity=0.347 Sum_probs=198.1
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCe--EEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEe------C
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVE------G 76 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~--~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~------~ 76 (475)
|.+.++||+|+||.||+|.+..++. .||||.++.... ...+..|..+++.++| ++++.++.++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH--PNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC--CCcceEEEEEccCCcccCC
Confidence 4578999999999999999877765 699998765422 2346778888888765 899998776532 2
Q ss_pred CEEEEEEEcC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEee
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 150 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 150 (475)
...+++|||+ +++|.+++... ...+++..++.++.||+.||.|||+++|+||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 3468999999 78998887432 2348999999999999999999999999999999999999 4778999999
Q ss_pred cCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011882 151 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 229 (475)
Q Consensus 151 FGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i 229 (475)
||+++.+..... +.......++..|++||.+.+..++.++|||||||++|||++ |..||.+... .+.+..+
T Consensus 156 fg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~ 227 (272)
T cd05075 156 FGLSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDYL 227 (272)
T ss_pred CCcccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH
Confidence 999987644321 111223356778999999999999999999999999999999 8999976432 3333333
Q ss_pred hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 230 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 230 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
...... .....++..+.+++.+||+.||++||++.+|++.|+++
T Consensus 228 ~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 RQGNRL----KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HcCCCC----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 332211 12346789999999999999999999999999998875
No 173
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.6e-39 Score=321.44 Aligned_cols=259 Identities=20% Similarity=0.302 Sum_probs=200.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCC--------------eEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCee
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTN--------------EEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNL 69 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~--------------~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l 69 (475)
++|++.++||+|+||.||+|.+..++ ..||||+++..... ..+.+|++++..+++ ++++.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h--~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN--PNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC--CCcCeE
Confidence 58999999999999999999875432 35899988654322 347789999998876 899999
Q ss_pred EEeeEeCCEEEEEEEcC-CCCHHHHHHHcC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 011882 70 RWFGVEGDYNVLVIDLL-GPSLEDLFNFCS-----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 137 (475)
Q Consensus 70 ~~~~~~~~~~~lvme~~-g~sL~~ll~~~~-----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl 137 (475)
++++......++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 99999999999999999 889999886431 136888999999999999999999999999999999999
Q ss_pred eeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc--CCCCCC
Q 011882 138 GLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQ 215 (475)
Q Consensus 138 ~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt--G~~Pf~ 215 (475)
+ +++.+||+|||++..+..... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 163 ~---~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 163 G---NHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred c---CCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 4 677899999999986543221 111223456789999999998899999999999999999988 678887
Q ss_pred CCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 216 GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 216 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
............+................+|..+.+|+.+||..+|++||++.+|++.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 235 LLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 643322111111111100000001122456899999999999999999999999988875
No 174
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.5e-39 Score=314.43 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=207.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||.|+||.||+|.+..+++.||||.+..... ...+..|..+++.+.| ++++.++.++...+..++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH--PNVIKYYASFIEDNELNI 79 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC--CchhhhhheeEeCCeEEE
Confidence 579999999999999999999999999999997654321 1356678888888765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 82 VIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
+|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||++ +.++.++|+|||++..+
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhcc
Confidence 99999 78999988642 3458999999999999999999999999999999999999 46788999999999866
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
...... .....|+..|+|||++.+..++.++||||||+++|+|++|..||.+.... .......+........
T Consensus 157 ~~~~~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~ 228 (267)
T cd08229 157 SSKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPL 228 (267)
T ss_pred ccCCcc-------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhhhhhcCCCCCC
Confidence 443221 12357899999999999988999999999999999999999999764321 1222222222111111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
....++.++.+++.+||..+|++||++.+|++.++++
T Consensus 229 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 229 ---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1134678999999999999999999999999999876
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.3e-39 Score=314.46 Aligned_cols=258 Identities=15% Similarity=0.254 Sum_probs=205.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCe---EEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~---~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
.++|++.+.||+|+||.||+|.+..+++ .||||++..... ...+..|+.+++.+.| ++++.+..+...+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH--PNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC--cCcceEEEEECCCCce
Confidence 4679999999999999999999877664 699999865432 2357778888888765 8999999999888999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
++||||+ +++|.+++......+++.+++.++.|++.||.|||++||+|+||||+||++ +.++.+||+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCccccccc
Confidence 9999999 779999998666679999999999999999999999999999999999999 467899999999998654
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
...... .+........+..|+|||++.+..++.++|||||||++|||++ |..||..... ......+.... ..+
T Consensus 158 ~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i~~~~-~~~ 231 (269)
T cd05065 158 DDTSDP--TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAIEQDY-RLP 231 (269)
T ss_pred cCcccc--ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHHHcCC-cCC
Confidence 322111 1111111123567999999999999999999999999999886 9999976432 22233332211 111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
....+|..+.+++.+||..+|++||++.+|+..|+.+
T Consensus 232 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 ---PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1245789999999999999999999999999988765
No 176
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-39 Score=320.33 Aligned_cols=260 Identities=18% Similarity=0.268 Sum_probs=200.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc----------------CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ----------------TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGI 66 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~----------------~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i 66 (475)
.++|++.++||+|+||.||++.+.. ++..||||++...... ..+..|+.+++.+.+ +++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~--~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD--PNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--CCc
Confidence 4679999999999999999986432 3457999998754322 357789999888865 899
Q ss_pred CeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 011882 67 PNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 135 (475)
Q Consensus 67 ~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NI 135 (475)
+.++.++...+..+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 99999999999999999999 789999987532 2377889999999999999999999999999999999
Q ss_pred EEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc--CCCC
Q 011882 136 LMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLP 213 (475)
Q Consensus 136 Ll~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt--G~~P 213 (475)
|++ .++.++|+|||+++.+...... .......++..|++||...+..++.++|||||||++|||++ |..|
T Consensus 162 li~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p 233 (296)
T cd05095 162 LVG---KNYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP 233 (296)
T ss_pred EEc---CCCCEEeccCcccccccCCcce-----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence 994 6788999999999865432211 11122345678999999988889999999999999999998 7899
Q ss_pred CCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 214 WQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 214 f~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
|..............................++..+.+++.+||..||++||++.+|.+.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 234 YSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 97643322111111111000000000112457899999999999999999999999998876
No 177
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.6e-39 Score=317.48 Aligned_cols=251 Identities=21% Similarity=0.257 Sum_probs=200.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.++||+|+||.||+|.+..+|+.||+|.+..... ...+..|+++++.++| ++++.+..+..+....++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH--KNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCC--CCeeeHHHHhccCCceEEEE
Confidence 59999999999999999999999999999998765432 2356789999988865 89999988888899999999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
||++++|.+++......+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++.+.....
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~- 154 (284)
T cd07839 79 EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVR- 154 (284)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCCC-
Confidence 999889998887656679999999999999999999999999999999999999 4678999999999986543221
Q ss_pred cccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc---------
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--------- 233 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 233 (475)
......++..|+|||++.+.. ++.++|||||||++|||++|..||..... ....+..+....
T Consensus 155 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07839 155 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEESWP 226 (284)
T ss_pred ------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC--HHHHHHHHHHHhCCCChHHhH
Confidence 112346789999999988754 78999999999999999999988643221 122222211100
Q ss_pred ---------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 ---------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 ---------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...........+++++.+++.+||..||.+|||++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000011223456789999999999999999999988753
No 178
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.8e-39 Score=313.57 Aligned_cols=257 Identities=16% Similarity=0.236 Sum_probs=205.7
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCe---EEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~---~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
..++|+..+.||+|+||.||+|.+..+++ .||||.+..... ...+..|++++..+.+ ++++.+..++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH--HNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC--CCeeEEEEEEccCCC
Confidence 34689999999999999999999876654 799998765432 2346778888877765 899999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.++||||+ +++|.+++......+++..++.++.|++.||+|||+.||+||||||+||++ +.++.+||+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVL 157 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceec
Confidence 99999999 789999997666679999999999999999999999999999999999999 46788999999999866
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
........ .......+..|++||++.+..++.++|||||||++|||++ |..||..... ......+.......
T Consensus 158 ~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~i~~~~~~~ 230 (268)
T cd05063 158 EDDPEGTY----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKAINDGFRLP 230 (268)
T ss_pred ccccccce----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhcCCCCC
Confidence 43322110 0111233567999999998889999999999999999997 9999976432 23333332221111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
....++.++.+++.+||..+|++||++.+|++.|+++
T Consensus 231 ----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 ----APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1235789999999999999999999999999999876
No 179
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.2e-39 Score=314.41 Aligned_cols=256 Identities=18% Similarity=0.216 Sum_probs=198.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCe----EEEEEEeccCCCch---HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKHP---QLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~----~vAvKi~~~~~~~~---~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
.++|++.+.||+|+||+||+|.+..+++ .|++|.+....... .+..|..++..+ .|++++.+++++.. ..
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l--~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL--DHAYIVRLLGICPG-AS 82 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC--CCCCcceEEEEECC-Cc
Confidence 4689999999999999999999887776 47777765432222 233344444444 45899999887754 45
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.++++||+ +++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 67788888 899999998666779999999999999999999999999999999999999 47789999999999866
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
....... ......++..|++||.+.+..++.++|||||||++|||++ |..||.+.... .+..+.......
T Consensus 160 ~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~ 230 (279)
T cd05111 160 YPDDKKY-----FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDLLEKGERL 230 (279)
T ss_pred cCCCccc-----ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcC
Confidence 4322111 1123467788999999998899999999999999999998 99999875332 222222222111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
. ....++..+.+++..||..+|++||++.++.+.|..+..
T Consensus 231 ~---~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 A---QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred C---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 1 123467889999999999999999999999999888764
No 180
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.3e-39 Score=318.79 Aligned_cols=258 Identities=21% Similarity=0.308 Sum_probs=205.4
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEc-----cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~-----~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
..++|.+.+.||+|+||.||+|.+. .++..||||+++..... ..+..|..+++.+.. |++++.++.++...
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~~ 111 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGN-HENIVNLLGACTIG 111 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccC-CCCcceEEEEEecC
Confidence 3468999999999999999999853 34568999987654322 347789999988843 39999999999999
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
+..+++|||+ +++|.+++..... .+++.+++.|+.||+.||.|||+++|+|+||||+|||+ +..+.++|+|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCccc
Confidence 9999999999 7899999875332 38999999999999999999999999999999999999 46788999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
+.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||....... .+.+.....
T Consensus 189 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~---~~~~~~~~~ 260 (302)
T cd05055 189 RDIMNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS---KFYKLIKEG 260 (302)
T ss_pred ccccCCCce-----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---HHHHHHHcC
Confidence 866443211 01123456788999999999999999999999999999998 999998754321 121221111
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
... ......+.++.+++.+||..+|++||++.+|++.|+++
T Consensus 261 ~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 YRM---AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CcC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111 11235688999999999999999999999999999875
No 181
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.2e-39 Score=315.75 Aligned_cols=251 Identities=21% Similarity=0.342 Sum_probs=207.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..+|++.++||.|+||.||+|.+.. ++.||+|++..... ...+..|..+++.+++ ++++.+..++...+..++||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRH--KHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCC--cchhheeeeEecCCCeEEEE
Confidence 4679999999999999999999866 88999999876543 3567788888888865 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||| +.++.+||+|||++..+....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhcCCcc
Confidence 999 78999998753 3458999999999999999999999999999999999999 477899999999998764322
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
. ......++..|++||++.+..++.++|||||||++|+|++ |..||.+.. ..+.+..+..... . .
T Consensus 159 ~-------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~---~~~~~~~~~~~~~-~---~ 224 (261)
T cd05148 159 Y-------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN---NHEVYDQITAGYR-M---P 224 (261)
T ss_pred c-------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC---HHHHHHHHHhCCc-C---C
Confidence 1 1123356778999999998889999999999999999998 899997643 2333333332211 1 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
....++.++.+++.+||..+|++||++.+|.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 225 CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 235678999999999999999999999999998875
No 182
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.8e-39 Score=315.79 Aligned_cols=251 Identities=20% Similarity=0.288 Sum_probs=200.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.++|++.++||+|+||.||+|.+..+++.||||+++..... ..+..|..+++.++| ++++.+.......+..+++|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h--~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH--SNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC--CCeeeEEEEEEeCCEEEEEE
Confidence 36899999999999999999999999999999998755432 346678888887765 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++.. .+.+++.+++.++.||+.||.|||++||+|+||||+||++ +..+.+||+|||++..+.....
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 86 EFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred eccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEccCccc
Confidence 999 7899998874 4579999999999999999999999999999999999999 4778899999999976543211
Q ss_pred ccccccccCCCCccCcccccccccc---CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~---g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
......|+..|+|||++. ...++.++|||||||++|||++|..||....... .+.............
T Consensus 162 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~ 231 (267)
T cd06645 162 -------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMTKSNFQPPKL 231 (267)
T ss_pred -------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh---hHHhhhccCCCCCcc
Confidence 123457999999999974 4458899999999999999999999996543211 111111111111110
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.-...++..+.+++.+||..+|++||++++|++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 111246788999999999999999999988753
No 183
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.6e-39 Score=316.34 Aligned_cols=244 Identities=20% Similarity=0.307 Sum_probs=196.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.++||+|+||.||+|.+..+++.||||++...... ..+..|.+++..+.| ++++.+++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS--PYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC--CCeeeEEEEEEECCEEEEEE
Confidence 4789999999999999999999999999999988654322 346778888887765 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|..+ ..+++..+..++.||+.||.|||+.||+|+||||+|||+ +.++.++|+|||++..+....
T Consensus 79 e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 79 EFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred ecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceeccccc-
Confidence 999 7777543 257889999999999999999999999999999999999 478899999999998654322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH----HHHHHHHhhccccccH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK----KQKYEKISEKKVSTSI 238 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~----~~~~~~i~~~~~~~~~ 238 (475)
.....||..|+|||++.+..++.++|||||||++|+|++|..||........ ......+.......
T Consensus 150 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-- 219 (279)
T cd06619 150 --------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV-- 219 (279)
T ss_pred --------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC--
Confidence 1345799999999999999999999999999999999999999975432211 11111111111110
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.....+++++.+++.+||..+|++||++.++++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 220 -LPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred -CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 011346789999999999999999999888753
No 184
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.8e-39 Score=317.18 Aligned_cols=257 Identities=20% Similarity=0.326 Sum_probs=205.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~-----~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
.++|++.+.||+|+||.||++.+... ...||+|++...... ..+..|+.+++.+.. |++++.+..++....
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~i~~~~~~~~~~~ 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGVCTQEG 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcC-CCCeeeEEEEEcCCC
Confidence 47899999999999999999997644 378999987654332 246678888888743 399999999988888
Q ss_pred EEEEEEEcC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC
Q 011882 78 YNVLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~---------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 141 (475)
..+++|||+ +++|.+++... ...+++..++.++.||+.||.|||+++|+||||||+|||+ +
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~---~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---T 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE---c
Confidence 999999999 88999998632 3458999999999999999999999999999999999999 4
Q ss_pred CCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 011882 142 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAG 220 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~ 220 (475)
+++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 240 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV- 240 (293)
T ss_pred CCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-
Confidence 6789999999999876543211 11122345678999999998889999999999999999997 9999976432
Q ss_pred CHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 221 TKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
.+.+..+...... .....++.++.+++.+||..+|++||++.+|++.|++++
T Consensus 241 --~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 --EELFKLLKEGYRM----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 2223322222111 122456889999999999999999999999999998764
No 185
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.2e-39 Score=316.14 Aligned_cols=257 Identities=21% Similarity=0.328 Sum_probs=203.0
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
..++|++.++||+|+||.||+|.++. .+..||+|+++..... ..+..|..+++.+.+ ++++.++.++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC--HHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC--CCeeeEEEEEcCC
Confidence 45789999999999999999997642 3458999987644322 235667788887765 8999999988888
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcE
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 146 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~v 146 (475)
...|+||||+ +++|.+++.... ..++...++.++.||+.||.|||+++|+||||||+|||++ .++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcE
Confidence 8999999999 899999997432 2356788999999999999999999999999999999994 67899
Q ss_pred EEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHH
Q 011882 147 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 225 (475)
Q Consensus 147 kL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~ 225 (475)
+|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.
T Consensus 159 ~L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQV 230 (288)
T ss_pred EECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHH
Confidence 9999999986543221 111223355778999999999899999999999999999998 7899976432 222
Q ss_pred HHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 226 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 226 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
+..+...... .....++..+.+++.+||+.+|++||++.++++.|++.+
T Consensus 231 ~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGGYL----DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCCCC----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 2222222111 123456899999999999999999999999998888765
No 186
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.5e-39 Score=314.16 Aligned_cols=259 Identities=20% Similarity=0.320 Sum_probs=206.0
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEcc----CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEe-C
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVE-G 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~----~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~-~ 76 (475)
-.++|++.+.||+|+||.||+|.+.. ++..|++|++...... ..+..|..+++.+.| ++++.+++++.. +
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~ 81 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH--QNILPILHVCIEDG 81 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEecCC
Confidence 45789999999999999999999876 3588999987644322 346678888887754 999999887665 5
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEE
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI 148 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~-------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL 148 (475)
...+++++|+ +++|.+++.... ..+++.+++.++.||+.||+|||+++|+||||||+|||++ +.+.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEE
Confidence 7789999998 789999987542 3589999999999999999999999999999999999994 6789999
Q ss_pred eecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHH
Q 011882 149 IDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYE 227 (475)
Q Consensus 149 ~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~ 227 (475)
+|||+++.+....... ......++..|+|||++.+..++.++|||||||++||+++ |..||..... .....
T Consensus 159 ~d~g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~ 230 (280)
T cd05043 159 TDNALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAA 230 (280)
T ss_pred CCCCCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHH
Confidence 9999998765432211 1123356778999999999889999999999999999998 9999976433 22222
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.+... .... ....+|+++.+++.+||..+|++||++.++++.|+++..+
T Consensus 231 ~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 231 YLKDG-YRLA---QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHcC-CCCC---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 22221 1111 1234689999999999999999999999999999998653
No 187
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-39 Score=317.82 Aligned_cols=260 Identities=17% Similarity=0.304 Sum_probs=207.8
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEc-------cCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNI-------QTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGV 74 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~-------~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~ 74 (475)
..++|.+.+.||+|+||.||+|.+. .++..||+|++..... ...+..|+.++..+.. |++++.+..++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~i~~~~~~~~ 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACT 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhcc-CCCchheeEEEe
Confidence 4578999999999999999999753 2345799998764322 2457788888888843 399999999999
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG 138 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~ 138 (475)
.....+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||+
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili- 170 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV- 170 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE-
Confidence 899999999999 789999987532 247888999999999999999999999999999999999
Q ss_pred eCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 011882 139 LGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 217 (475)
Q Consensus 139 ~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~ 217 (475)
+.++.+||+|||+++.+....... ......++..|+|||++.+..++.++|||||||+||||++ |..||.+.
T Consensus 171 --~~~~~~kl~D~g~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 171 --TENNVMKIADFGLARDVNNIDYYK-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred --cCCCcEEECCCccceecccccccc-----cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 467899999999998764432211 1123356778999999999889999999999999999998 88898764
Q ss_pred CCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 218 KAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 218 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
. ..+.+..+...... .....++.++.+++.+||..+|++||++.+|++.|++++.-
T Consensus 244 ~---~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 P---VEELFKLLKEGHRM----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred C---HHHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 3 23333333322211 12246789999999999999999999999999999998754
No 188
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.9e-39 Score=324.81 Aligned_cols=260 Identities=20% Similarity=0.316 Sum_probs=202.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEc-----cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeE-eC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGV-EG 76 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~-----~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~-~~ 76 (475)
.++|++.++||+|+||.||+|.+. .+++.||||+++..... ..+..|+.++..+.++ ++++.++.++. .+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~~~~~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH-LNVVNLLGACTKPG 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC-ccHhhhcceeecCC
Confidence 368999999999999999999853 46789999998764433 3467799998888653 88888876654 45
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcC---------------------------------------------------------
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCS--------------------------------------------------------- 98 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~--------------------------------------------------------- 98 (475)
...+++|||+ +++|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 6789999999 889999886421
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccc
Q 011882 99 ---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 169 (475)
Q Consensus 99 ---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~ 169 (475)
..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+..... +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~-----~~ 236 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPD-----YV 236 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcc-----hh
Confidence 236788899999999999999999999999999999999 4678999999999986543221 11
Q ss_pred cCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHH
Q 011882 170 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 248 (475)
Q Consensus 170 ~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 248 (475)
......++..|+|||++.+..++.++|||||||++|||++ |..||...... ......+..... . .....++++
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~-~---~~~~~~~~~ 310 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTR-M---RAPDYTTPE 310 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHHHhccCC-C---CCCCCCCHH
Confidence 1223356778999999999899999999999999999996 99999764332 111122211111 1 112346789
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 249 FASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 249 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
+.+++..||..+|++||++.+|++.|+.+++.
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998864
No 189
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6e-39 Score=310.87 Aligned_cols=250 Identities=25% Similarity=0.359 Sum_probs=202.7
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-------chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+++++.+.+ ++++.++.++...+..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH--ERIVQYYGCLRDDETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC--CCeeeeEEEEccCCeE
Confidence 579999999999999999999999999999998754321 1346678888887765 8999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
+++|||+ +++|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||+++.+.
T Consensus 80 ~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecc
Confidence 9999999 8899998874 3468999999999999999999999999999999999999 467889999999997654
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+......
T Consensus 156 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~--- 225 (263)
T cd06625 156 TICSSG----TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPTN--- 225 (263)
T ss_pred cccccc----ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---HHHHHHHhccCCC---
Confidence 321110 001235688999999999999999999999999999999999999976422 2222222221111
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..+...++.++.+++.+||..+|++||++.++++
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 2234567899999999999999999999888864
No 190
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.9e-39 Score=350.08 Aligned_cols=263 Identities=25% Similarity=0.355 Sum_probs=206.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.++||+|+||.||+|.+..+++.||||++..... ...+.+|++++..++| ++++.++.++.+.+..++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H--PNIVkl~~v~~d~~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH--PGIVPVYSICSDGDPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC--cCcCeEEEEEeeCCEEEE
Confidence 689999999999999999999999999999998865322 2357788999888876 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHc----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEee
Q 011882 82 VIDLL-GPSLEDLFNFC----------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 150 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~----------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 150 (475)
+|||+ |++|.+++... ...++...++.|+.||+.||+|||++||+||||||+|||+ +..+.+||+|
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiD 156 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILD 156 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEe
Confidence 99999 89999988642 1235677889999999999999999999999999999999 4778899999
Q ss_pred cCCccccccccccc-----------ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCC
Q 011882 151 FGLAKRYRDTATHQ-----------HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 219 (475)
Q Consensus 151 FGlA~~~~~~~~~~-----------~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~ 219 (475)
||+++......... ...........||+.|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus 157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~ 236 (932)
T PRK13184 157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG 236 (932)
T ss_pred cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence 99998762211100 0001112345799999999999999999999999999999999999999976332
Q ss_pred CCHHHHHHHHhhccccccHH-HHhcCChHHHHHHHHHHhcCCCCCCC-CHHHHHHHHHHHHHH
Q 011882 220 GTKKQKYEKISEKKVSTSIE-ALCRGYPTEFASYFHYCRSLRFDDKP-DYAYLKRLFRDLFIR 280 (475)
Q Consensus 220 ~~~~~~~~~i~~~~~~~~~~-~l~~~~p~~l~~li~~cl~~dp~~RP-t~~~l~~~L~~l~~~ 280 (475)
.... .... ...+.. .....+|+.+.+++.+||..||++|| +++++.+.|+..+..
T Consensus 237 ~ki~--~~~~----i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 237 RKIS--YRDV----ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhhh--hhhh----ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111 1110 001100 01246789999999999999999996 567777777777653
No 191
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-39 Score=331.21 Aligned_cols=257 Identities=23% Similarity=0.323 Sum_probs=204.3
Q ss_pred CceEEeeeEeeeCceeEEEEEEc-----cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~-----~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
++|.++++||+|+||.||+|.+. .+++.||||+++..... ..+..|++++..+.. |+|++.+++++.....
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~-H~niv~~~~~~~~~~~ 115 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGP-HLNIVNLLGACTKGGP 115 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCC-CCCeEEEEEEEccCCC
Confidence 46888999999999999999863 35578999998755333 257789999988863 3999999999998889
Q ss_pred EEEEEEcC-CCCHHHHHHHcC-----------------------------------------------------------
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS----------------------------------------------------------- 98 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~----------------------------------------------------------- 98 (475)
.++||||+ +++|.+++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 99999999 899999986432
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC
Q 011882 99 --------------------------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 140 (475)
Q Consensus 99 --------------------------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~ 140 (475)
..+++..++.|+.||+.||.|||+.+|+||||||+|||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~-- 273 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC-- 273 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe--
Confidence 1367778899999999999999999999999999999994
Q ss_pred CCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCC
Q 011882 141 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 219 (475)
Q Consensus 141 ~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~ 219 (475)
+.+.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 274 -~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 274 -EGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred -CCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 6788999999999865432210 11223467889999999999889999999999999999998 8999976432
Q ss_pred CCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 220 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 220 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
. +.+.......... .....++.++.+|+.+||..+|.+||++.+|++.|++++
T Consensus 348 ~---~~~~~~~~~~~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 N---EQFYNAIKRGYRM---AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred h---HHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 2 1121211111111 122456899999999999999999999999999999875
No 192
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.9e-40 Score=328.50 Aligned_cols=235 Identities=21% Similarity=0.241 Sum_probs=186.9
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHh-CCCCCcCeeEEeeEeCCEEEEEEEcC-C
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQ-GGSTGIPNLRWFGVEGDYNVLVIDLL-G 87 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~-~~~~~i~~l~~~~~~~~~~~lvme~~-g 87 (475)
||+|+||+||+|++..+++.||||++..... ......|..++..+. ..|++++.++..+......|+||||+ +
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 7999999999999999999999998754321 112334555554432 24699999999999999999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccc
Q 011882 88 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 167 (475)
Q Consensus 88 ~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~ 167 (475)
++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~----- 151 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNK----- 151 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCC-----
Confidence 899888864 4579999999999999999999999999999999999999 4778999999999975432221
Q ss_pred cccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 168 YRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
.....+||..|+|||++.+. .++.++|||||||+||||++|..||.+.. ..+.+..+........ ...++
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~----~~~~~ 222 (330)
T cd05586 152 --TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED---TQQMYRNIAFGKVRFP----KNVLS 222 (330)
T ss_pred --CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC---HHHHHHHHHcCCCCCC----CccCC
Confidence 12346799999999999865 48999999999999999999999997632 3344444443322211 12468
Q ss_pred HHHHHHHHHHhcCCCCCCCCH
Q 011882 247 TEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~ 267 (475)
.++.+++..||..||++||++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCC
Confidence 899999999999999999954
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-38 Score=320.52 Aligned_cols=262 Identities=18% Similarity=0.305 Sum_probs=207.7
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccC-------CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQT-------NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGV 74 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~-------~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~ 74 (475)
...+|++++.||+|+||.||+|.+... ...||+|+++..... ..+..|+.++..+.. |++|+.++.++.
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~ 88 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGK-HKNIINLLGACT 88 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcC-CCCeeeeeEEEc
Confidence 345799999999999999999986432 237999987754332 357788888888843 389999999999
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG 138 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~ 138 (475)
..+..+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 889999999999 889999986421 2478899999999999999999999999999999999994
Q ss_pred eCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 011882 139 LGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 217 (475)
Q Consensus 139 ~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~ 217 (475)
.++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||+||||++ |..||.+.
T Consensus 169 ---~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 169 ---EDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred ---CCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 6788999999999865432211 11122345678999999999999999999999999999998 89999764
Q ss_pred CCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011882 218 KAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 282 (475)
Q Consensus 218 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 282 (475)
.. ...+..+...... .....++.++.+++.+||..+|++||++.+|++.|+.++....
T Consensus 241 ~~---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 241 PV---EELFKLLKEGHRM----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred CH---HHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 32 2333333222111 1234578899999999999999999999999999999886554
No 194
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6e-39 Score=313.49 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=203.9
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~-----~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
..++|++.+.||+|+||.||+|.+... +..||+|.+...... ..+..|+.++..+.+ ++++.+++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~ 81 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC--HHVVRLLGVVSTG 81 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC--CceeEEEEEEcCC
Confidence 457899999999999999999998644 378999997644322 246678888877754 8999999999999
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcE
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 146 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~v 146 (475)
...++||||+ +++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||+ +.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCE
Confidence 9999999999 789999986422 236888999999999999999999999999999999999 477899
Q ss_pred EEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHH
Q 011882 147 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 225 (475)
Q Consensus 147 kL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~ 225 (475)
||+|||+++.+..... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.
T Consensus 159 kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~ 230 (277)
T cd05032 159 KIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEV 230 (277)
T ss_pred EECCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHH
Confidence 9999999986544321 111234467889999999998889999999999999999998 9999976432 333
Q ss_pred HHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 226 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 226 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
...+..... ..+...++.++.+++.+||..+|++||++.+|++.|+
T Consensus 231 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 231 LKFVIDGGH----LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 333332211 1123457899999999999999999999999988775
No 195
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=327.13 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=203.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC-EEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD-YNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~-~~~lv 82 (475)
.++|.-..+||+|+||.||+|.- .++..||||.++.... ..++..|++++..++| +|++.+.+||.+.+ ..+||
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H--~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRH--PNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCC--cCcccEEEEEecCCceEEEE
Confidence 35677788999999999999984 5668999998877655 4679999999998885 99999999999998 59999
Q ss_pred EEcC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 83 IDLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
+||+ .|+|++.+..... .++|...++|+.++|.||+|||+.. ||||||||+|||| |.+..+||+|||+|+..
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLG 227 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccC
Confidence 9999 7899999975555 8999999999999999999999843 9999999999999 68999999999999655
Q ss_pred cc-cccccccccccCCCC-ccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC---CHHHHH-HHHhh
Q 011882 158 RD-TATHQHIPYRENKNL-TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG---TKKQKY-EKISE 231 (475)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~-~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~---~~~~~~-~~i~~ 231 (475)
.. ... . ... .||..|++||++..+..+.|+||||||++|+||++|+.|.+..... ...... ..+..
T Consensus 228 ~~~~~~---~-----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 228 PEGDTS---V-----STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred Cccccc---e-----eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 43 111 0 112 7999999999999889999999999999999999999888754311 111111 11111
Q ss_pred ccccccHHH-Hh-cCCh-----HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 232 KKVSTSIEA-LC-RGYP-----TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 232 ~~~~~~~~~-l~-~~~p-----~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
......++. +. ..++ ..+..+...|+..+|.+||++.+|.+.|+.+.
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 111111111 11 1222 23677888999999999999999988886553
No 196
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2e-38 Score=311.00 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=199.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+..|+.+++.++| ++++.+..++......++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH--PNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC--CCEeeeeeEEeeCCEEEEE
Confidence 579999999999999999999998999999998754322 2346778888888875 8999999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ ++.|..++. ....+++..++.++.||+.||.|||+.||+||||||+||++ +.++.++|+|||++..+....
T Consensus 79 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 79 FEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred EeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCc
Confidence 9999 545555443 44569999999999999999999999999999999999999 467899999999998765432
Q ss_pred cccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc--------
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-------- 232 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~-------- 232 (475)
. ......++..|+|||++.+ ..++.++|||||||++|||++|..||.+.........+......
T Consensus 155 ~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 155 D-------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred c-------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 1 1123467889999999886 45789999999999999999999999875432222211111000
Q ss_pred ---------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ---------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ---------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
............++..+.+|+.+||..+|++||++.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred cccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 001112233456788999999999999999999998775
No 197
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.2e-39 Score=310.90 Aligned_cols=253 Identities=22% Similarity=0.374 Sum_probs=202.3
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+..++|++.++||+|+||.||+|.+. .+..||+|.+..... ...+..|+.+++.+.+ ++++.++.+.. ....+++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH--DKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCC--CceEEEEeEEC-CCCcEEE
Confidence 34578999999999999999999864 667799998865433 3467889999998876 88888877764 4557899
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++ +++.++|+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccCc
Confidence 9999 78999998753 34589999999999999999999999999999999999994 6788999999999866442
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... ......++..|+|||++.+..++.++||||||+++|||++ |..||.+... .+....+.... ..
T Consensus 156 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~-~~--- 222 (260)
T cd05070 156 EYT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQVERGY-RM--- 222 (260)
T ss_pred ccc------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCC-CC---
Confidence 211 1122345678999999998889999999999999999999 8999976433 22233332211 11
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
.....++.++.+++.+||..+|++||++.++.++|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1234678899999999999999999999999988874
No 198
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8e-39 Score=311.76 Aligned_cols=251 Identities=20% Similarity=0.348 Sum_probs=198.7
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEe------CC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVE------GD 77 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~------~~ 77 (475)
..+.|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|..++..+.+ |++++.+..++.. ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~-h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH-HRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcC-CCCeeeEeeEEeecCCCCCCc
Confidence 35779999999999999999999999999999999865433 2457788888887753 3899998877654 34
Q ss_pred EEEEEEEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
..|++|||+ +++|.+++... ...+++..+..++.||+.||.|||+++|+||||||+||++ ++++.++|+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCCce
Confidence 689999999 77999998753 3468999999999999999999999999999999999999 477889999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 230 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~ 230 (475)
....... ......|+..|+|||++.+ ..++.++|||||||++|||++|..||..... ......+.
T Consensus 160 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~---~~~~~~~~ 229 (272)
T cd06637 160 QLDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---MRALFLIP 229 (272)
T ss_pred ecccccc-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH---HHHHHHHh
Confidence 6543221 1234578999999999863 3578899999999999999999999975432 22222221
Q ss_pred hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 231 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 231 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..... ......++.++.+++.+||..+|.+||++.++++
T Consensus 230 ~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCC---CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11111 1112356889999999999999999999888753
No 199
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-38 Score=309.40 Aligned_cols=252 Identities=23% Similarity=0.383 Sum_probs=200.5
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..++|++.++||+|+||.||+|.+..+ ..||+|.+..... ...+..|+.+++.+.| ++++.++.+.. .+..+++|
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRH--DKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCC--CCeeeEEEEEc-CCCcEEEE
Confidence 347799999999999999999987544 4699998765433 2457789999988875 78888776654 45678999
Q ss_pred EcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+|||+ ++++.++|+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCCc
Confidence 999 679999987533 348999999999999999999999999999999999999 477889999999997654322
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
. .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... ......+.... .. .
T Consensus 157 ~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~-~~---~ 223 (260)
T cd05069 157 Y------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQVERGY-RM---P 223 (260)
T ss_pred c------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCC-CC---C
Confidence 1 11123356778999999998889999999999999999999 9999987433 22233332221 11 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
....+|..+.+++.+||..||++||++++|.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 234578999999999999999999999999998875
No 200
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.8e-39 Score=315.91 Aligned_cols=250 Identities=19% Similarity=0.288 Sum_probs=200.8
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
..+.|+++++||.|+||.||+|.+..+++.||+|++...... ..+..|+.+++.+.| ++++.+...+..+...++|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH--PYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC--CcEeeeEEEEEeCCeEEEE
Confidence 457799999999999999999999999999999998655322 346678888887775 8999999988888999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|..++......+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceeccccc
Confidence 9999 788888876556679999999999999999999999999999999999999 467899999999987543321
Q ss_pred cccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
. ......++..|+|||++.+ ..++.++|||||||++|||++|..||..... .+.+.++......
T Consensus 165 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~- 233 (292)
T cd06644 165 Q-------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPP- 233 (292)
T ss_pred c-------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHHHHHHhcCCCc-
Confidence 1 1134568899999999853 3468899999999999999999999976432 2223333222111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.......++.++.+++.+||..+|++||++.+++
T Consensus 234 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 234 -TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred -cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 1112245678999999999999999999988774
No 201
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1e-38 Score=310.19 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=203.7
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----------hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----------PQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----------~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
+|.+.+.||.|+||.||+|.+..+++.||+|.+...... ..+..|+.++..+.| ++++.+.+++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~ 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH--ENIVQYLGSSLDA 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC--CCeeeEEEEEEeC
Confidence 588999999999999999999889999999987543321 246678888888865 8999999999999
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
++.+++|||+ +++|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||++ ++.+.++|+|||+++
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~ 154 (267)
T cd06628 79 DHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISK 154 (267)
T ss_pred CccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCc
Confidence 9999999999 8899999974 3568999999999999999999999999999999999999 477899999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
.+....... ..........|+..|+|||.+.+..++.++|||||||++|+|++|..||.+... ...+..+....
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~-- 228 (267)
T cd06628 155 KLEANSLST-KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENA-- 228 (267)
T ss_pred ccccccccC-CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---HHHHHHHhccC--
Confidence 775322111 011112345689999999999998899999999999999999999999986432 22333322211
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+.+...++.++.++|.+||+.||++||++.+|++
T Consensus 229 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 --SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred --CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 12233567899999999999999999999988854
No 202
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=305.16 Aligned_cols=264 Identities=19% Similarity=0.225 Sum_probs=203.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC--CchHHHHHHHHHHHHhCCCCCcCeeEEeeE-----eCCE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGSTGIPNLRWFGV-----EGDY 78 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~--~~~~~~~E~~il~~l~~~~~~i~~l~~~~~-----~~~~ 78 (475)
+++|++.++||+|||+.||++++..+++.||+|.+.... ..+...+|++..+++++ +++..+..+.. ....
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s--~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNS--PNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCC--cchHHHHHHHHHhhccCcee
Confidence 567999999999999999999999999999999876654 23457889999999988 88888765544 3345
Q ss_pred EEEEEEcC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~---~~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
.||+++|. .|+|.+.++... ..+++.+++.|+.+|++||++||+.. +.||||||.|||++ +.+.++|.|||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D~G 174 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMDLG 174 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEecc
Confidence 89999998 889999987653 35999999999999999999999998 99999999999995 57899999999
Q ss_pred Cccccccccc--ccccccccCCCCccCccccccccccC---CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011882 153 LAKRYRDTAT--HQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 227 (475)
Q Consensus 153 lA~~~~~~~~--~~~~~~~~~~~~~GT~~Y~APE~~~g---~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~ 227 (475)
.++...-... .+.....+...-.+|..|.|||.+.- ...+.++|||||||+||+|+.|..||...-... .....
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G-gSlaL 253 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG-GSLAL 253 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC-CeEEE
Confidence 9986543221 11111112233467999999999864 346899999999999999999999996421100 00000
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
.+....+..+ . ...+++.+.++|+.|++.||.+||++.+|+..++++.
T Consensus 254 Av~n~q~s~P--~-~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 254 AVQNAQISIP--N-SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeeccccccC--C-CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 0111111111 0 1237899999999999999999999999999888764
No 203
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.4e-39 Score=309.40 Aligned_cols=254 Identities=22% Similarity=0.368 Sum_probs=207.4
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+..++|++.++||+|+||.||+|.+. .++.||||.+..... ...+..|+.+++.+++ ++++.++.++......+++
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH--DKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCC--CCEeeeeeeeecCCceEEE
Confidence 55788999999999999999999964 567899998875433 3568889999988875 8999999998888899999
Q ss_pred EEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||++ ++++.+||+|||+++.+...
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccceeccch
Confidence 9999 889999987533 469999999999999999999999999999999999999 46789999999999876532
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
.. .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+... ...+..+..... .
T Consensus 157 ~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~~~~-~--- 223 (261)
T cd05034 157 EY------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVERGYR-M--- 223 (261)
T ss_pred hh------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCC-C---
Confidence 11 11122345678999999999889999999999999999998 9999976432 333333332211 1
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
.....+|.++.+++.+||..+|++||+++++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1124568899999999999999999999999998874
No 204
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.4e-39 Score=312.75 Aligned_cols=248 Identities=23% Similarity=0.412 Sum_probs=196.6
Q ss_pred EEeeeEeeeCceeEEEEEEc----cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 10 RLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 10 ~l~~~LG~G~fG~Vy~a~~~----~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++.+.||.|.||.||+|.+. ..+..|+||+++..... ..+..|.+.+..++| ++|+.+++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRH--PNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSB--TTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccc--ccccccccccccccccccc
Confidence 57899999999999999987 34678999999654332 467888898888855 9999999999988889999
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++..++.|+.||+.||.|||+++|+|+||+++|||++ .++.+||+|||++......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence 9999 78999999866 56799999999999999999999999999999999999994 6889999999999876322
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... .......+...|+|||.+.+..++.++||||||+++|||++ |+.||.+.. ..+....+......
T Consensus 157 ~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~---~~~~~~~~~~~~~~---- 224 (259)
T PF07714_consen 157 SKY-----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD---NEEIIEKLKQGQRL---- 224 (259)
T ss_dssp SSE-----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC---HHHHHHHHHTTEET----
T ss_pred ccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc----
Confidence 111 11233457789999999998889999999999999999999 789997753 33334444333221
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
.....+|..+.+++..||..+|++||++.+|++.|
T Consensus 225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 12356899999999999999999999999998765
No 205
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8e-39 Score=319.17 Aligned_cols=254 Identities=18% Similarity=0.230 Sum_probs=190.3
Q ss_pred eeeEeeeCceeEEEEEEcc--CCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeE--eCCEEEEEEEcCC
Q 011882 12 GRKIGSGSFGEIYLGTNIQ--TNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGV--EGDYNVLVIDLLG 87 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~--~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~--~~~~~~lvme~~g 87 (475)
+.+||+|+||.||+|.+.. ++..||+|.+........+.+|+.+++.++| ++++.+..++. .....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKH--PNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCC--CCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 4689999999999999653 5689999998766656678899999998876 88988877664 4567899999999
Q ss_pred CCHHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC-CCCCcEEEeecCCccccc
Q 011882 88 PSLEDLFNFC--------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 88 ~sL~~ll~~~--------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGlA~~~~ 158 (475)
++|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|||+..+ +..+.+||+|||+++.+.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 9999887532 1248899999999999999999999999999999999999432 356789999999998765
Q ss_pred ccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH------HHHHHHHhh
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK------KQKYEKISE 231 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~------~~~~~~i~~ 231 (475)
..... ........||..|+|||++.+. .++.++|||||||++|||++|..||........ ...+..+..
T Consensus 164 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 164 SPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred CCccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 43211 1122345789999999999874 479999999999999999999999975322100 000000000
Q ss_pred c---c-------------cc-------------cc----HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 232 K---K-------------VS-------------TS----IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 232 ~---~-------------~~-------------~~----~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. . .. .. .+......+..+.+|+.+||..||.+|||+.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l 312 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQAL 312 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHh
Confidence 0 0 00 00 0000112345688999999999999999998875
No 206
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-38 Score=316.26 Aligned_cols=260 Identities=19% Similarity=0.314 Sum_probs=206.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-------CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEe
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVE 75 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-------~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~ 75 (475)
.++|.+.++||+|+||.||+|.+.. ....||+|+++..... ..+..|+.+++.+.. |++++.++.++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~ 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGK-HKNIINLLGVCTQ 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccC-CCCeeeEEEEEcc
Confidence 4689999999999999999998632 3457999987654332 246678888887743 3999999999888
Q ss_pred CCEEEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEee
Q 011882 76 GDYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 139 (475)
Q Consensus 76 ~~~~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~ 139 (475)
....+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-- 167 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV-- 167 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE--
Confidence 88999999999 889999986532 348899999999999999999999999999999999999
Q ss_pred CCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCC
Q 011882 140 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLK 218 (475)
Q Consensus 140 ~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~ 218 (475)
+.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 168 -~~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 168 -TEDNVMKIADFGLARGVHDIDYYK-----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred -cCCCcEEEcccccccccccccccc-----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 467889999999998664322111 1112234568999999999889999999999999999999 899997643
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 219 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
. ...+..+...... .....++.++.+++.+||..+|++||++.++++.|+++....
T Consensus 242 ~---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 242 V---EELFKLLREGHRM----DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred H---HHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 2 2333333322211 123467889999999999999999999999999999886543
No 207
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.2e-39 Score=314.01 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=203.1
Q ss_pred CCceEEeeeEeeeCceeEEEEEEc-----cCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~-----~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
..+|++.++||+|+||.||+|... .++..||+|.+..... ...+..|++++..+++ ++++.+..++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH--QHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC--CCCceEEEEEecCCc
Confidence 467999999999999999999743 3466899998764432 2457788888888865 899999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS--------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 143 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~--------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 143 (475)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---QG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---CC
Confidence 99999999 889999987532 2488999999999999999999999999999999999994 67
Q ss_pred CcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCH
Q 011882 144 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 222 (475)
Q Consensus 144 ~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~ 222 (475)
+.+||+|||+++....... +.......+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--- 230 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--- 230 (280)
T ss_pred CCEEECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---
Confidence 8999999999976543211 111233456788999999999999999999999999999998 9999976433
Q ss_pred HHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 223 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
...+..+...... .....+|+.+.+++.+||..||.+||++.+|++.|+
T Consensus 231 ~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 TEAIECITQGREL----ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHcCccC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 2233333222111 122467899999999999999999999999988775
No 208
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.2e-39 Score=309.29 Aligned_cols=250 Identities=21% Similarity=0.334 Sum_probs=206.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.++|++.++||+|+||.||+|.+..+++.|++|.+........+..|.++++.+.+ ++++.+.+++......|+++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS--PYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC--CcEeeeeeeeecCCcEEEEEec
Confidence 36899999999999999999999888999999998766556678899999998854 9999999999999999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..++.++.|++.||.|||+.+|+|+||+|+||++ +.++.++|+|||++..+.....
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCcc--
Confidence 9 789999998667789999999999999999999999999999999999999 4678899999999987654321
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
......|+..|+|||++.+..++.++|||||||++|+|++|..||...... .....+..... .. ......
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~-~~-~~~~~~ 224 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM---RAIFMIPNKPP-PT-LSDPEK 224 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh---hhhhhhccCCC-CC-CCchhh
Confidence 122346889999999999999999999999999999999999999764332 11111111111 00 111234
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
++.++.+++..||+.+|++||++.+|++
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 6789999999999999999999988753
No 209
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=319.87 Aligned_cols=258 Identities=19% Similarity=0.277 Sum_probs=219.4
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
-|.++.+||+|+||.||+|.++.+|+.||||.+.++....++..|+.+++.+.. ++++++++.+......|||||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S--~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKS--KYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCC--chhhhhhhhhccCCceEeehhhcC
Confidence 377889999999999999999999999999999999999999999999998877 88999988888888899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
.|++.+++...++++++.++..++...+.||+|||...-||||||..|||| +.+|..||+|||.|-.+.+.-.
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTMA---- 184 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTMA---- 184 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhHH----
Confidence 789999999888899999999999999999999999999999999999999 6889999999999988776543
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
..+++.||+.|||||++....|+.++||||||++..||..|+.||.+.... ..+..|..+..++.. -+...+
T Consensus 185 ---KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---RAIFMIPT~PPPTF~--KPE~WS 256 (502)
T KOG0574|consen 185 ---KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---RAIFMIPTKPPPTFK--KPEEWS 256 (502)
T ss_pred ---hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---ceeEeccCCCCCCCC--ChHhhh
Confidence 236789999999999999999999999999999999999999999876542 112222222222111 112357
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQF 285 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~ 285 (475)
.+|.++++.||.++|++|-++-+| +++-|.++....
T Consensus 257 ~~F~DFi~~CLiK~PE~R~TA~~L---~~H~FiknA~g~ 292 (502)
T KOG0574|consen 257 SEFNDFIRSCLIKKPEERKTALRL---CEHTFIKNAPGC 292 (502)
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHH---hhhhhhcCCCcc
Confidence 899999999999999999886544 677777665443
No 210
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-38 Score=308.06 Aligned_cols=247 Identities=22% Similarity=0.340 Sum_probs=204.1
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
.++|++.+.||.|+||.||+|.+ .++.||||.+..... ..++..|..++..+++ ++++.++++.......++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRH--PNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCC--cceeeeEEEEcCCCCeEEEEE
Confidence 56899999999999999999985 488999999876654 4567889999988875 889999988888899999999
Q ss_pred cC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+ +++|.+++..... .+++..++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccccccc
Confidence 99 6899999875432 58999999999999999999999999999999999999 4778999999999987633221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
...++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+..... ...
T Consensus 158 ----------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~----~~~ 220 (256)
T cd05039 158 ----------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHVEKGYR----MEA 220 (256)
T ss_pred ----------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHhcCCC----CCC
Confidence 2245678999999998889999999999999999997 9999976432 222222222111 112
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
...+|+++.+++.+||..+|++||++.+|++.|+.
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 34678999999999999999999999999988864
No 211
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.2e-38 Score=312.45 Aligned_cols=249 Identities=18% Similarity=0.336 Sum_probs=195.7
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.+.||+|+||.||+|.+..+|+.||||.++..... .++..|..++.... .|++++.+..++......|++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSV-DCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHc-CCCCeeeeeEEEecCCcEEEEh
Confidence 4799999999999999999999999999999988654322 23444555433333 3499999999999899999999
Q ss_pred EcCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 84 DLLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 84 e~~g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||+.++|.+++... +..+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||++..+..
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeeccccccccc
Confidence 99999998888642 34589999999999999999999997 99999999999999 5778999999999986543
Q ss_pred cccccccccccCCCCccCccccccccccC----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLG----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
... .....|+..|+|||++.+ ..++.++|||||||++|||++|..||..... ..+.+..+......
T Consensus 157 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~ 226 (283)
T cd06617 157 SVA--------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQVVEEPSP 226 (283)
T ss_pred ccc--------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHHHHhcCCC
Confidence 211 122468899999999865 4468999999999999999999999965322 12222222221111
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. + ....+|.++.+++.+||..+|++||++.+|++
T Consensus 227 ~-~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 227 Q-L--PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred C-C--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 1 01347899999999999999999999988854
No 212
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.9e-39 Score=314.17 Aligned_cols=248 Identities=18% Similarity=0.280 Sum_probs=200.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++++.||+|+||.||+|.+..+++.||+|.+..... ...+.+|..+++.+.+ ++++.++..+...+..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS--PYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC--CcHHhhhhheecCCeEEEEE
Confidence 479999999999999999999988999999998765432 2357788888888765 89999999888899999999
Q ss_pred EcC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 84 DLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 84 e~~-g~sL~~ll~~~--~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||+ +++|..++... ...+++..+..++.||+.||.|||+ .+|+||||||+|||++ ..+.+||+|||++..+..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCcccccC
Confidence 999 88998888743 2369999999999999999999997 5999999999999994 678899999999976543
Q ss_pred cccccccccccCCCCccCccccccccccCCC------CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIE------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~------~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
... ....|+..|+|||++.+.. ++.++|||||||++|+|++|..||...........+..+....
T Consensus 156 ~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd06622 156 SLA---------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD 226 (286)
T ss_pred Ccc---------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC
Confidence 221 2346888999999986543 5889999999999999999999997643322223333333222
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.. .+...++.++.+++.+||..+|++||++.++++
T Consensus 227 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 PP----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CC----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 21 223457899999999999999999999988854
No 213
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-38 Score=313.29 Aligned_cols=247 Identities=19% Similarity=0.295 Sum_probs=199.1
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.|++.+.||+|+||.||+|.+..++..|++|.+..... ...+..|+++++.+.| ++++.+..++......++||||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH--PNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC--CCeeeEEEEEeeCCEEEEEEEe
Confidence 47899999999999999999999999999998765432 2346678888888765 8999999999999999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|..++......+++..+..++.||+.||.|||+.||+||||||+|||+ +..+.+||+|||++........
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~-- 158 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQ-- 158 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEcccccccccccccc--
Confidence 9 788888876555679999999999999999999999999999999999999 4678899999999976543221
Q ss_pred ccccccCCCCccCcccccccccc-----CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 165 HIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~-----g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
......|+..|+|||++. +..++.++|||||||++|||++|..||..... .+.+..+....... .
T Consensus 159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~--~ 228 (282)
T cd06643 159 -----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPT--L 228 (282)
T ss_pred -----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---HHHHHHHhhcCCCC--C
Confidence 123457899999999984 44578899999999999999999999976432 23333332221111 1
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.....++.++.++|.+||..+|++||++.+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 12245788999999999999999999987763
No 214
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.7e-38 Score=307.30 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=197.4
Q ss_pred eeEeeeCceeEEEEEEccCC---eEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQTN---EEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~---~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
++||+|+||.||+|.+..++ ..||+|.+..... ...+..|..+++.+.| ++++.+..++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH--PCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC--CCeeeEEEEEc-CCceEEEEEeC
Confidence 47999999999999876655 7899998775543 2357778888888765 88999887765 45679999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+++|.+++... ..+++..++.++.|++.||.|||+++|+||||||+|||+ +.++.+||+|||+++.+......
T Consensus 78 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~-- 151 (257)
T cd05060 78 PLGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDY-- 151 (257)
T ss_pred CCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcc--
Confidence 78999999743 379999999999999999999999999999999999999 47789999999999876443221
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
+.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+...... .....
T Consensus 152 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~----~~~~~ 222 (257)
T cd05060 152 --YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLESGERL----PRPEE 222 (257)
T ss_pred --cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcCCcC----CCCCC
Confidence 111122335678999999999899999999999999999998 9999976432 2233333222211 12356
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
++.++.+++.+||..+|++||++.+|.+.|+++
T Consensus 223 ~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 789999999999999999999999999999875
No 215
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9.3e-39 Score=308.61 Aligned_cols=246 Identities=20% Similarity=0.294 Sum_probs=200.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.++|++.+.||+|+||.||++. .+++.||+|++........+..|+.++..+++ ++++.+..++... ..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVTAQAFLEETAVMTKLHH--KNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcchHHHHHHHHHHHHhCCC--CCcCeEEEEEcCC-CcEEEEEC
Confidence 4679999999999999999987 57889999998766555678889998888765 8899988777654 46899999
Q ss_pred C-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 86 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 86 ~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
+ +++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~~~~-- 154 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMGV-- 154 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceeccccC--
Confidence 9 789999987543 358999999999999999999999999999999999999 467899999999997643321
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
.....+..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+...... ...
T Consensus 155 --------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~----~~~ 219 (254)
T cd05083 155 --------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL---KEVKECVEKGYRM----EPP 219 (254)
T ss_pred --------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH---HHHHHHHhCCCCC----CCC
Confidence 12234568999999998899999999999999999997 9999976433 2222222221111 123
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
..+|.++.+++.+||..+|++||++++|++.|++
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 5678999999999999999999999999888763
No 216
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3e-38 Score=311.23 Aligned_cols=253 Identities=21% Similarity=0.264 Sum_probs=199.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|++.++||+|+||.||+|.+..+++.||||.+..... ...+..|+++++.++| ++++.+..++...+..++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKH--ANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCC--cceeeEEEEEecCCeEEEE
Confidence 4789999999999999999999988999999998765432 2346679999998875 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||++++|.+++......+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCCCc
Confidence 9999889999987666679999999999999999999999999999999999999 5778899999999875432111
Q ss_pred ccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh---cc-----
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---KK----- 233 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~---~~----- 233 (475)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.... .+.+..+.. ..
T Consensus 159 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07844 159 -------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETW 229 (291)
T ss_pred -------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhh
Confidence 1122356889999999876 45899999999999999999999999764321 111111110 00
Q ss_pred -----------------ccccHHHHhcCCh--HHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 -----------------VSTSIEALCRGYP--TEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 -----------------~~~~~~~l~~~~p--~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
....+......+. .++.+++.+||+.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 230 PGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0011111122334 78899999999999999999888753
No 217
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-38 Score=306.64 Aligned_cols=245 Identities=27% Similarity=0.381 Sum_probs=203.9
Q ss_pred eeEeeeCceeEEEEEEccC---CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~---~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
++||+|+||.||+|.+... +..|+||++...... ..+..|++++..+. |++++.++.++......+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG--HPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC--CCChheeeeeecCCCceEEEEEec
Confidence 4799999999999998766 889999998766543 46778999998887 499999998888899999999999
Q ss_pred -CCCHHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 87 -GPSLEDLFNFC--------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 87 -g~sL~~ll~~~--------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
+++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||++ +.++.+||+|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEccccccccc
Confidence 99999999865 4679999999999999999999999999999999999999 46789999999999876
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
..... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+......
T Consensus 156 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~- 226 (262)
T cd00192 156 YDDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLRKGYRL- 226 (262)
T ss_pred ccccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCCC-
Confidence 54321 112234567899999999998889999999999999999999 6999987532 3333333322111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
.....++.++.+++.+||..+|++||++.++++.|
T Consensus 227 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 227 ---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred ---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 12345689999999999999999999999998776
No 218
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.7e-38 Score=303.52 Aligned_cols=246 Identities=22% Similarity=0.290 Sum_probs=199.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeE-eCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGV-EGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~-~~~~~~lv 82 (475)
.|++.+.||.|+||.||++.+..+++.||||.+...... ..+..|.++++.+++ ++++.+..... .....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH--PNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC--CCeeeeeeeecCCCCEEEEE
Confidence 499999999999999999999999999999988654322 346678888887765 78888766554 45578999
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++.+++.++.||+.||.|||++||+||||||+||++ +..+.++|+|||++..+...
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEeccc
Confidence 9999 78999988753 3458999999999999999999999999999999999999 46789999999999876432
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.. ......|++.|+|||++.+..++.++|||||||++|+|++|..||.... .......+...... .
T Consensus 156 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~---~~~~~~~~~~~~~~----~ 221 (257)
T cd08223 156 CD-------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD---MNSLVYRIIEGKLP----P 221 (257)
T ss_pred CC-------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHhcCCC----C
Confidence 21 1234578999999999999999999999999999999999999997533 22222233222221 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
+...+++++.+++.+||+.+|++||++.++++
T Consensus 222 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 222 MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 23467899999999999999999999888753
No 219
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.2e-38 Score=309.56 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=203.8
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|+.+++.+.+ ++++.+..+...+...++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH--PYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC--CCCcceeeEEecCCeeEEEe
Confidence 59999999999999999999999999999998875442 2457788889888874 99999999999999999999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
||++++|.+++......+++.+++.++.||+.||.|||++||+|+||||+||++ +..+.++|+|||++........
T Consensus 79 e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 79 EYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred cccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCC-
Confidence 999999999997666779999999999999999999999999999999999999 4678899999999987654321
Q ss_pred cccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc----------
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---------- 232 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 232 (475)
.......|+..|+|||++.+.. ++.++|||||||++|||++|..||.+................
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 1122347899999999987654 689999999999999999998888664321111111110000
Q ss_pred ------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 ------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 ------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
........+....+.++.+++.+||..+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0011123334567899999999999999999999887753
No 220
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.7e-38 Score=310.94 Aligned_cols=252 Identities=20% Similarity=0.253 Sum_probs=197.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE----
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY---- 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~---- 78 (475)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.++..+.++ ++++.++.++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES-IYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC-CCccceeeeEeecCCCCCc
Confidence 479999999999999999999999999999998765432 24577899999988653 889998887776554
Q ss_pred -EEEEEEcCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 79 -NVLVIDLLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 79 -~~lvme~~g~sL~~ll~~~----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
.|++|||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ ...+.+||+|||+
T Consensus 80 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~--~~~~~~kl~dfg~ 157 (295)
T cd07837 80 SLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD--KQKGLLKIADLGL 157 (295)
T ss_pred eEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe--cCCCeEEEeeccc
Confidence 8999999988999887643 23589999999999999999999999999999999999995 2378999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
++.+..... ......+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+.... ..+.++...
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~ 227 (295)
T cd07837 158 GRAFSIPVK-------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL---QQLLHIFKL 227 (295)
T ss_pred ceecCCCcc-------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHH
Confidence 986543211 11223568899999988764 4799999999999999999999999764322 222211110
Q ss_pred c-----------------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 K-----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ~-----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. ....+......++.++.++|.+||..||.+||++.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 228 LGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred hCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 0 01111222345789999999999999999999988774
No 221
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.2e-38 Score=320.22 Aligned_cols=255 Identities=17% Similarity=0.219 Sum_probs=193.9
Q ss_pred EEeeeEeee--CceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 10 RLGRKIGSG--SFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 10 ~l~~~LG~G--~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+++++||+| +|++||++.+..+|+.||||.++..... ..+..|..+++.++| ++|+.++.++..++..++||
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH--PNIVPYRATFIADNELWVVT 78 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC--CCeeeEEEEEEECCEEEEEE
Confidence 367889999 7899999999999999999998754322 346678888888765 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.++|+||+.+.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhcccccc
Confidence 999 88999998643 3459999999999999999999999999999999999999 467889999998765443221
Q ss_pred cccccccccCCCCccCccccccccccC--CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc----
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS---- 235 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g--~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~---- 235 (475)
..............++..|+|||++.+ ..++.++|||||||++|||++|..||....... .+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~ 232 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ---MLLEKLNGTVPCLLD 232 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH---HHHHHhcCCcccccc
Confidence 111000011123457888999999986 358999999999999999999999997643211 11111110000
Q ss_pred -------------------------------------ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 236 -------------------------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 236 -------------------------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.........+++++.+++.+||+.||++||++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000111235678999999999999999999988853
No 222
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.9e-38 Score=315.28 Aligned_cols=259 Identities=19% Similarity=0.272 Sum_probs=204.2
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCe----EEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~----~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
+-.++|++.+.||+|+||.||+|.+..+++ .||+|++...... ..+..|..++..+.| ++++.+++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h--~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH--PHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC--CCcccEEEEEcCC
Confidence 456789999999999999999999887776 5789987654332 246678888777765 9999998877654
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
..+++++|+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLAR 157 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccc
Confidence 457888888 789999987666679999999999999999999999999999999999999 467789999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
.+....... ......++..|++||++.+..++.++|||||||++|||++ |..||.+.... .+..+.....
T Consensus 158 ~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~ 228 (303)
T cd05110 158 LLEGDEKEY-----NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR----EIPDLLEKGE 228 (303)
T ss_pred cccCccccc-----ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHCCC
Confidence 764322110 1123346778999999999999999999999999999997 99999764321 1222222211
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
... ....++..+.+++..||..+|++||++.+|++.|+++...
T Consensus 229 ~~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 229 RLP---QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111 1244678999999999999999999999999999987543
No 223
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7e-39 Score=314.95 Aligned_cols=257 Identities=21% Similarity=0.271 Sum_probs=200.6
Q ss_pred ceEEeeeEeeeCceeEEEEEE----ccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DY 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~----~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~ 78 (475)
-|+++++||+|+||.||+|.+ ..+++.||+|.++.... ...+.+|+.+++.+.+ ++++.+.+++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH--ENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCC--CCeeeeeeEEecCCCCc
Confidence 479999999999999999974 45688999998764432 2357789999888865 8899888877654 67
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.++||||+ |++|.+++......+++.+++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||+++.+
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAI 159 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCcccccc
Confidence 89999999 8999999875555689999999999999999999999999999999999994 6788999999999876
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCC-----------C-CHHHH
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA-----------G-TKKQK 225 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~-----------~-~~~~~ 225 (475)
...... ........++..|+|||++.+..++.++|||||||++|||+++..|+..... . .....
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 543221 1112345678889999999988899999999999999999998766532110 0 00011
Q ss_pred HHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 226 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 226 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
...+..... ......++.++.+|+.+||+.+|++||++.++++.|+++
T Consensus 236 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKR----LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCcc----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111111 112345789999999999999999999999999998876
No 224
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.5e-38 Score=311.94 Aligned_cols=250 Identities=20% Similarity=0.353 Sum_probs=198.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-CchHHHHHHHHHHHHhCCCCCcCeeEEeeE------eCCE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGSTGIPNLRWFGV------EGDY 78 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~~~~~E~~il~~l~~~~~~i~~l~~~~~------~~~~ 78 (475)
.+.|++.+.||.|+||.||+|.+..+++.||+|++.... ....+..|..++..+.. |++++.+.+++. ....
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~-h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSH-HRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcC-CCcEEEEeeehhcccccCCCCE
Confidence 478999999999999999999999999999999876543 23457778888888754 489998887764 3467
Q ss_pred EEEEEEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
.|++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||++ ++.+.++|+|||++..
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcchhh
Confidence 89999999 67999998753 3458899999999999999999999999999999999999 4678899999999886
Q ss_pred ccccccccccccccCCCCccCcccccccccc-----CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
...... ......|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+..
T Consensus 171 ~~~~~~-------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~---~~~~~~~~~ 240 (282)
T cd06636 171 LDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP---MRALFLIPR 240 (282)
T ss_pred hhcccc-------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH---HhhhhhHhh
Confidence 543221 123457899999999986 34578899999999999999999999976432 222222222
Q ss_pred ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.... ......++.++.++|.+||..||.+||++.+|++
T Consensus 241 ~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 241 NPPP---KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCCC---CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1111 1122457899999999999999999999988853
No 225
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.8e-38 Score=313.95 Aligned_cols=256 Identities=19% Similarity=0.279 Sum_probs=201.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.++||+|+||.||++.+..++..||+|.+...... .++..|++++..++| ++++.++.++..++..++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS--PYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEeeCCEEEEEe
Confidence 4799999999999999999999999999999988654332 346789999888865 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++ .++.+||+|||++.......
T Consensus 79 ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 79 EHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred eccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCcccccccc
Confidence 999 88999998753 579999999999999999999998 6999999999999994 67889999999987653321
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh----------
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---------- 231 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~---------- 231 (475)
.....|+..|+|||++.+..++.++|||||||++|+|++|..||...........+.....
T Consensus 155 ---------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
T cd06615 155 ---------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRP 225 (308)
T ss_pred ---------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccc
Confidence 1345789999999999988899999999999999999999999965332111111100000
Q ss_pred -------------------ccccccHHHHh-cCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 232 -------------------KKVSTSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 232 -------------------~~~~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.......+.++ ..++.++.+++.+||..+|++||++.+| +++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l---l~~~~~~ 291 (308)
T cd06615 226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKEL---TKHPFIK 291 (308)
T ss_pred ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHH---hcChhhh
Confidence 00000000000 1357789999999999999999998877 4444433
No 226
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.6e-38 Score=311.60 Aligned_cols=248 Identities=21% Similarity=0.325 Sum_probs=201.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..+|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|..+++.+.| ++++.+..++..+...|+||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h--~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--PNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC--CCEeeEEEEEEeCCEEEEee
Confidence 4689999999999999999999999999999998765433 2456778888877655 89999998888899999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++. ...+++.+++.++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++........
T Consensus 97 e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 97 EYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred cccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcccccc
Confidence 999 889999986 3468999999999999999999999999999999999999 4678899999999886543221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|++.|+|||.+.+..++.++|||||||++|+|++|..||...... ...+........ . ....
T Consensus 172 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--~~~~~~~~~~~~--~-~~~~ 239 (296)
T cd06654 172 -------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLIATNGTP--E-LQNP 239 (296)
T ss_pred -------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--HhHHHHhcCCCC--C-CCCc
Confidence 112347899999999999888999999999999999999999999764321 111111111110 0 0112
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..++..+.+++.+||..+|++||++.+|++
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 457789999999999999999999888854
No 227
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.5e-38 Score=309.52 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=198.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|++.+.||+|+||.||+|.+..+++.||||++...... ..+.+|+.+++.+.| ++++.+.+++..++..|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH--ANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC--CCEeEEEEEEecCCeEEEE
Confidence 46899999999999999999999999999999987654322 256788888888875 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||++++|.+.+......+.+..+..++.||+.||.|||++||+|+||||+|||+ +..+.+||+|||+++.......
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 82 FEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred EecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCCC
Confidence 9999888888776555568899999999999999999999999999999999999 4678999999999976433221
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc---------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--------- 232 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~--------- 232 (475)
......++..|+|||++.+. .++.++|||||||++|||++|..||.+... ..+.+.++...
T Consensus 159 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07870 159 -------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTEDTW 229 (291)
T ss_pred -------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHHHHHHcCCCChhhh
Confidence 11234678999999998764 478999999999999999999999976432 12222221110
Q ss_pred ----------------cccccHHHHhc--CChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ----------------KVSTSIEALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ----------------~~~~~~~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
........+.. ..+.++.+++.+|+..||.+||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred hhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 00001111111 1257899999999999999999988874
No 228
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.4e-38 Score=314.70 Aligned_cols=261 Identities=18% Similarity=0.247 Sum_probs=206.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||++.+..+++.||||.+..... ...+..|+.+++.+.+ ++++.+++.+..+++.++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN--PFVVSMFCSFETKRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC--CCeeeeEEEEecCCEEEE
Confidence 479999999999999999999999999999998765432 2346678888887765 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ |++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +..+.+||+|||+++.....
T Consensus 79 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 79 VMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred EEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcC
Confidence 99999 8899999974 3569999999999999999999999999999999999999 47789999999998742211
Q ss_pred ccccc--------cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 161 ATHQH--------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 161 ~~~~~--------~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
..... ..........|+..|+|||.+.+..++.++|||||||++|||++|..||.+.. ..+.+..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~---~~~~~~~~~~~ 231 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT---PEELFGQVISD 231 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhc
Confidence 11000 00001123468889999999998889999999999999999999999997643 23333333222
Q ss_pred cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 233 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 233 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
....+. ....+|.++.+++.+||+.+|++||+..++.++|++.+
T Consensus 232 ~~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~ 275 (305)
T cd05609 232 DIEWPE--GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF 275 (305)
T ss_pred ccCCCC--ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCcc
Confidence 211111 11257899999999999999999999887877777654
No 229
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.6e-38 Score=302.58 Aligned_cols=246 Identities=21% Similarity=0.266 Sum_probs=206.4
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||.|+||.||.+++..+++.|++|.+..... ...+..|+.+++.++| ++++.+..++.+.+..+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH--PNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC--CCeeEEEeEEecCCeEEEEE
Confidence 59999999999999999999999999999998765432 2357789999998865 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ...+++..+..++.|++.||.|||+.||+|+||||+||+++ ..+.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEccccc
Confidence 999 88999998754 34689999999999999999999999999999999999994 67889999999998764433
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......|+..|+|||++.+..++.++|||||||++|||++|..||... ...+.+..+....... .
T Consensus 156 ~-------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~~~~~~~~~~----~ 221 (256)
T cd08221 156 S-------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT---NPLNLVVKIVQGNYTP----V 221 (256)
T ss_pred c-------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC---CHHHHHHHHHcCCCCC----C
Confidence 2 123457899999999999988999999999999999999999999763 3334444444433322 1
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.++.+++.+||..+|++||++.++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 222 VSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred ccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 2567899999999999999999999988865
No 230
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.3e-38 Score=313.30 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=199.7
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DY 78 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~ 78 (475)
-.++|++.++||+|+||.||+|.+..+|+.||+|++...... .....|+.+++.++| ++++.+..+.... +.
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH--PNIVELKEVVVGKHLDS 82 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCC--CCCcceEEEEecCCCCe
Confidence 457899999999999999999999999999999987654322 245678899988876 8888888776544 56
Q ss_pred EEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
.++||||++++|.+++......+++.+++.++.||+.||.|||++||+||||||+||++ +..+.+||+|||++..+.
T Consensus 83 ~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 83 IFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecC
Confidence 89999999889999988666779999999999999999999999999999999999999 477899999999998765
Q ss_pred ccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--- 234 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--- 234 (475)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|..||.+... .+.+..+.....
T Consensus 160 ~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~---~~~~~~~~~~~~~~~ 229 (309)
T cd07845 160 LPAK-------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE---IEQLDLIIQLLGTPN 229 (309)
T ss_pred CccC-------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCC
Confidence 4321 1122345788999999876 4579999999999999999999999976433 222222221100
Q ss_pred ----------------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 235 ----------------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 235 ----------------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..........+++++.++|.+||..||++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il 288 (309)
T cd07845 230 ESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL 288 (309)
T ss_pred hhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 0011111233578899999999999999999988775
No 231
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.7e-38 Score=312.59 Aligned_cols=253 Identities=22% Similarity=0.345 Sum_probs=203.0
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc-----CCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~-----~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
.++|++.+.||+|+||.||+|.+.. ++..||||++..... ...+..|+.++..+.| ++++.+.+++..++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h--~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH--PNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC--CchheEEEEEcCCC
Confidence 4679999999999999999998743 678999998865433 2347778888888865 89999999998888
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS---------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 135 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~---------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NI 135 (475)
..+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||+++|+||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 999999999 789999986422 2478889999999999999999999999999999999
Q ss_pred EEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCC
Q 011882 136 LMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPW 214 (475)
Q Consensus 136 Ll~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf 214 (475)
|+ +.++.++|+|||++..+..... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 162 l~---~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 162 LV---GENMVVKIADFGLSRNIYSADY-----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred Ee---cCCCceEECccccceecccCcc-----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 99 4778999999999976543221 111122345678999999999899999999999999999997 88899
Q ss_pred CCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 215 QGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 215 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
.+... .+.+..+...... .....++.++.+++.+||..+|++||++.+|.+.|+
T Consensus 234 ~~~~~---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 234 YGMAH---EEVIYYVRDGNVL----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCH---HHHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 76432 2333333322221 123467899999999999999999999999998886
No 232
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.7e-38 Score=309.57 Aligned_cols=253 Identities=19% Similarity=0.313 Sum_probs=198.9
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeE-----eCC
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGV-----EGD 77 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~-----~~~ 77 (475)
...++|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|..++..+.. |++++.++.++. .++
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~-h~~i~~~~~~~~~~~~~~~~ 93 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSD-HPNVVKFYGMYYKKDVKNGD 93 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhc-CCCeeeeeeeeeecccCCCC
Confidence 356899999999999999999999999999999998764332 3457789898888853 389999887763 446
Q ss_pred EEEEEEEcC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 78 YNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
..++||||+ +++|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+||+++ ..+.+||+|||+
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg~ 170 (286)
T cd06638 94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVDFGV 170 (286)
T ss_pred eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEccCCc
Confidence 789999999 8899988753 234689999999999999999999999999999999999994 677899999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~ 228 (475)
++.+..... ......|+..|+|||++.+ ..++.++|||||||++|||++|..||...... ..+..
T Consensus 171 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~---~~~~~ 240 (286)
T cd06638 171 SAQLTSTRL-------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM---RALFK 240 (286)
T ss_pred eeecccCCC-------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh---HHHhh
Confidence 986643221 1123468999999999853 34788999999999999999999999764331 22222
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
+...... .......++.++.+++.+||+.+|++||++.+|++
T Consensus 241 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 241 IPRNPPP--TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred ccccCCC--cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 2111111 11112346788999999999999999999988864
No 233
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.9e-38 Score=311.47 Aligned_cols=253 Identities=19% Similarity=0.218 Sum_probs=199.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-------hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-------~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
+|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|+++++.++| ++++.++.++...+..+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH--PNIIGLLDVFGHKSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC--CCChhhhheeecCCEEE
Confidence 589999999999999999999889999999988655432 235678888888875 89999999999899999
Q ss_pred EEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 81 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 81 lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+||||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.++|+|||+++.+...
T Consensus 79 lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 79 LVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCC
Confidence 999999999999997544469999999999999999999999999999999999999 46789999999999876543
Q ss_pred ccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-------
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------- 232 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~------- 232 (475)
.. ......++..|+|||.+.+ ..++.++|||||||++|||++|..||.+........+.......
T Consensus 156 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 156 NR-------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred Cc-------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 21 1122356888999999865 45789999999999999999998888764332211111111000
Q ss_pred -------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 -------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 -------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
........+....+.++.+++..||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0011122233456788999999999999999999888854
No 234
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.1e-38 Score=311.18 Aligned_cols=260 Identities=22% Similarity=0.250 Sum_probs=199.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEE----ccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeE--eCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGV--EGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~----~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~--~~~ 77 (475)
.++|++.+.||+|+||.||+|.. ..+++.||||.+...... ..+..|++++..++| ++++.+.+++. ...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH--DNIVKYKGVCYSAGRR 80 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC--CCeeEEEEEEccCCCC
Confidence 46899999999999999999973 457889999987654332 357789999888865 89999877654 345
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTKV 157 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCccccc
Confidence 689999999 899999997655679999999999999999999999999999999999999 4678899999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH------------HH
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK------------KQ 224 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~------------~~ 224 (475)
+....... .......++..|+|||++.+..++.++|||||||++|||++|..|+........ ..
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 158 LPQDKEYY----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY 233 (284)
T ss_pred ccCCCcce----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchH
Confidence 64432210 011122345679999999998999999999999999999998877643221100 00
Q ss_pred HHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 225 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
.+..+...... ......++.++.+++.+||..+|++||++.+|++.|+.+
T Consensus 234 ~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 234 HLIELLKNNGR---LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHhcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000000 011245788999999999999999999999999988764
No 235
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5e-38 Score=307.56 Aligned_cols=251 Identities=21% Similarity=0.224 Sum_probs=195.9
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DYNVLVI 83 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~~~lvm 83 (475)
|++.++||+|+||.||+|.+..+++.||||.++..... .....|..++..+.. |++++.++.++.+. +..++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~-h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSP-HPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCC-CCCccceEEEEecCCCCcEEEEE
Confidence 78999999999999999999999999999987654222 223456666666653 48999998888877 8899999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
||+.++|.+.+......+++.+++.++.||+.||.|||++||+||||||+||+++ . +.+||+|||+++.+.....
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCCC-
Confidence 9998899888875556799999999999999999999999999999999999994 4 8999999999986643221
Q ss_pred cccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc----------
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---------- 232 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 232 (475)
.....++..|+|||++.+ ..++.++|||||||++|||++|..||.+.........+......
T Consensus 155 -------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 155 -------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred -------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 123468899999997654 45789999999999999999999999764332111111111100
Q ss_pred -----------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 -----------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 -----------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.....+..+...++.++.++|.+||..+|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0011123334567899999999999999999999888753
No 236
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=331.84 Aligned_cols=257 Identities=25% Similarity=0.347 Sum_probs=210.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCe---E-EEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE---E-VAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~---~-vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
.++..+.++||+|+||+||+|..+..+. . ||||..+... ...++..|+++++.++| +||+.++++....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H--~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH--PNVVRFYGVAVLE 233 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC--CCEEEEEEEEcCC
Confidence 3455667999999999999999765432 3 8999877522 22458889999999887 9999999999999
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
...+||||+| ||+|.+++......++..+.+.++.+.+.||+|||++++|||||-..|+|++ ..+.+||+|||+++
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLSR 310 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCcccccc
Confidence 9999999999 9999999997776799999999999999999999999999999999999995 66778999999987
Q ss_pred cccccccccccccccCC-CCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 156 RYRDTATHQHIPYRENK-NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
.-..-. ... ...-...|+|||.+....|+.++|||||||++||+++ |..||.+..... ...+|....
T Consensus 311 ~~~~~~--------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~---v~~kI~~~~ 379 (474)
T KOG0194|consen 311 AGSQYV--------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE---VKAKIVKNG 379 (474)
T ss_pred CCccee--------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH---HHHHHHhcC
Confidence 543111 111 1124578999999999999999999999999999999 899999976543 333332222
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
.... .....|.++..++.+||..+|++||++.++.+.|+.+....
T Consensus 380 ~r~~---~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 380 YRMP---IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred ccCC---CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 2221 12367899999999999999999999999999999987543
No 237
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.4e-38 Score=309.20 Aligned_cols=245 Identities=22% Similarity=0.352 Sum_probs=203.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.+.||.|+||.||+|.+..+++.||||++..... ...+..|+.+++.++| ++++.+..++..+...++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS--PYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC--CCeeeeeEEEEECCeEEEEE
Confidence 579999999999999999999999999999998865532 2356778888888875 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++... .+++..++.++.|++.||.|||+++|+||||+|+||++ ++++.++|+|||+++.+.....
T Consensus 79 e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 79 EYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeeccccc
Confidence 999 88999998743 79999999999999999999999999999999999999 5788999999999987754321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|+..|+|||.+.+..++.++|||||||++|||++|..||..... ......+....... +.
T Consensus 154 -------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~----~~ 219 (274)
T cd06609 154 -------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP---MRVLFLIPKNNPPS----LE 219 (274)
T ss_pred -------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch---HHHHHHhhhcCCCC----Cc
Confidence 12345788999999999998899999999999999999999999976432 22222222221111 11
Q ss_pred cC-ChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.. ++.++.+++.+||..+|++||++.++++
T Consensus 220 ~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 GNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 22 7889999999999999999999888843
No 238
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-40 Score=304.90 Aligned_cols=249 Identities=20% Similarity=0.239 Sum_probs=212.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----------hHHHHHHHHHHHHhCCCCCcCeeEEeeEe
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----------PQLQYEAKLYKILQGGSTGIPNLRWFGVE 75 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----------~~~~~E~~il~~l~~~~~~i~~l~~~~~~ 75 (475)
-++|.-.+.||.|..+.|-++.++.+++++|+|++...... +....|+.|++.+.++ |+|+.+.++++.
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GH-P~II~l~D~yes 94 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGH-PYIIDLQDVYES 94 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCC-CcEEEeeeeccC
Confidence 35678889999999999999999999999999987654321 1246788999998875 999999999999
Q ss_pred CCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 76 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 76 ~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
+.+.++|+|+| .|-|.|++.. .-.++++....|+.|++.|++|||.++||||||||+|||+ +++.++||+|||+|
T Consensus 95 ~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa 170 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFA 170 (411)
T ss_pred cchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEecccee
Confidence 99999999999 8899999873 4569999999999999999999999999999999999999 68899999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCC------CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI------EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~------~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~ 228 (475)
+.+..... ....|||+.|+|||.+... .|+..+|+|++|||||.|+.|..||... .....+..
T Consensus 171 ~~l~~Gek--------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---kQmlMLR~ 239 (411)
T KOG0599|consen 171 CQLEPGEK--------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---KQMLMLRM 239 (411)
T ss_pred eccCCchh--------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH---HHHHHHHH
Confidence 98765432 2457999999999988643 4889999999999999999999999752 33455667
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
|.++++...-++ +.+++...++||.+||+.||.+|.|+++++
T Consensus 240 ImeGkyqF~spe-Wadis~~~KdLIsrlLqVdp~~Ritake~L 281 (411)
T KOG0599|consen 240 IMEGKYQFRSPE-WADISATVKDLISRLLQVDPTKRITAKEAL 281 (411)
T ss_pred HHhcccccCCcc-hhhccccHHHHHHHHHeeCchhcccHHHHh
Confidence 777776554443 367889999999999999999999988874
No 239
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9.5e-39 Score=313.01 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=203.0
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.++|++.++||.|+||.||+|.+..+++.||+|++...... ..+..|+++++.++| ++++.+..++..+...++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH--PNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC--CceeEEEEEEecCCeEEEEe
Confidence 35799999999999999999999889999999998654322 356778889888874 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+||++ +.++.++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccccc
Confidence 999 889999988666779999999999999999999999999999999999999 5778999999999876543221
Q ss_pred ccccccccCCCCccCcccccccccc-----CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~-----g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
......|+..|++||.+. +..++.++|||||||++|||++|..||..... .+.+..+.......
T Consensus 159 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~- 227 (280)
T cd06611 159 -------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP---MRVLLKILKSEPPT- 227 (280)
T ss_pred -------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH---HHHHHHHhcCCCCC-
Confidence 113457899999999975 34478899999999999999999999976432 23333333221111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
......++.++.+++..||..+|++||++.+++
T Consensus 228 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (280)
T cd06611 228 -LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260 (280)
T ss_pred -cCCcccCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 011245788999999999999999999988773
No 240
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.4e-38 Score=311.18 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=202.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..+|++.+.||.|+||.||+|.+..+++.||||.+..... ...+..|..+++.++| ++++.+..+....+..++|+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN--PNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCC--CceeeeeeeEecCceEEEEE
Confidence 3579999999999999999999999999999998765432 3456778888888865 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++. ...+++.+++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||++........
T Consensus 96 e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 96 EYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred EecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhcccccc
Confidence 999 889999886 3468999999999999999999999999999999999999 4678999999999886543221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||.+... ......+...... .....
T Consensus 171 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~---~~~~~~~~~~~~~--~~~~~ 238 (296)
T cd06655 171 -------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP---LRALYLIATNGTP--ELQNP 238 (296)
T ss_pred -------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcCCc--ccCCc
Confidence 11235789999999999988899999999999999999999999976432 2222222211110 11123
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+++.+.++|.+||..||++||++.+|+
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 45788999999999999999999988774
No 241
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2e-38 Score=307.98 Aligned_cols=253 Identities=21% Similarity=0.318 Sum_probs=203.5
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--------chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--------HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
+|+..+.||+|+||.||+|.+..+++.||||++..... ...+..|+++++.++| ++++.+.+++.+.+..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH--PHIIRMLGATCEDSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCC--CceehhhceeccCCeE
Confidence 58899999999999999999999999999998865431 2457789999998876 8999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
++||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||++. .....+||+|||++..+.
T Consensus 79 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFGAAARLA 155 (268)
T ss_pred EEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEcccccccccc
Confidence 9999999 8899999874 45789999999999999999999999999999999999994 233469999999998775
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
........ ......|+..|+|||.+.+..++.++|||||||++|+|++|..||..............+......
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 229 (268)
T cd06630 156 AKGTGAGE---FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA--- 229 (268)
T ss_pred cccccCCc---cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC---
Confidence 43221110 123457899999999999888999999999999999999999999754433323322222211111
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+...+++++.+++.+||..+|++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 230 PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 122345678999999999999999999998875
No 242
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2e-38 Score=319.85 Aligned_cols=257 Identities=19% Similarity=0.216 Sum_probs=198.3
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC-----
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG----- 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~----- 76 (475)
++++|++.++||+|+||.||+|.+..+++.||||+++.... ...+..|+.+++.+++ ++++.++.+....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKH--ENIIGILDIIRPPSFESF 80 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCC--CCcCchhheeeccccccc
Confidence 67899999999999999999999999999999998764322 2346678888888875 8898887665433
Q ss_pred CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 77 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
...|++|||++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.
T Consensus 81 ~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 81 NDVYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLARI 155 (336)
T ss_pred ceEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECcccceee
Confidence 3579999999889988875 4579999999999999999999999999999999999999 5778999999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh----
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---- 231 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~---- 231 (475)
......... ......||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+..+..
T Consensus 156 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~ 231 (336)
T cd07849 156 ADPEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ 231 (336)
T ss_pred ccccccccC----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 644322111 1234578999999998765 4589999999999999999999999976332111111110000
Q ss_pred -------------------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 -------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 -------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.........+...++.++.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00011122233456788999999999999999999887744
No 243
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.1e-38 Score=307.69 Aligned_cols=256 Identities=22% Similarity=0.329 Sum_probs=204.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccC---CeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~---~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
.++|.+.++||+|+||.||+|.+... ...||||....... ...+..|+.+++.+.| ++++.++.++.. ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH--PHIVKLIGVITE-NPV 81 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC--CchhceeEEEcC-CCc
Confidence 45799999999999999999997544 34799998765432 2357778888888865 889998887765 456
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
++||||+ +++|.+++......+++..++.++.||+.||.|||++|++||||||+|||++ ..+.+||+|||+++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeecc
Confidence 8999999 8899999986555699999999999999999999999999999999999994 67899999999998665
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
..... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+....+......
T Consensus 159 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~~~~~~~-- 227 (270)
T cd05056 159 DESYY------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN---NDVIGRIENGERL-- 227 (270)
T ss_pred cccce------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHcCCcC--
Confidence 43211 1112345568999999988889999999999999999886 9999977543 2223333222211
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.....+|.++.+++.+||..+|++||++.++++.|+++..+
T Consensus 228 --~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 --PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 12356789999999999999999999999999999988654
No 244
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=345.89 Aligned_cols=258 Identities=20% Similarity=0.295 Sum_probs=212.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCC-----eEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTN-----EEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~-----~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
...++.+.||+|.||.||.|...... ..||||.++..... .++.+|..++..+.| +||+.+.+++.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H--pNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH--PNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC--cceeeEEEeecCCCC
Confidence 45788999999999999999975432 24899987766443 458889999998887 999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeec
Q 011882 79 NVLVIDLL-GPSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 151 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 151 (475)
.+|++||| ||+|..++... ...++..+++.|+.|||+|+.||+++++|||||-..|+||+ ....|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEEEccc
Confidence 99999999 99999999977 55699999999999999999999999999999999999994 6799999999
Q ss_pred CCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHh
Q 011882 152 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 230 (475)
Q Consensus 152 GlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~ 230 (475)
|+|+.+.+... |+......-...|||||.+....++.|+|||||||+|||+++ |..||.+.........+....
T Consensus 847 GlArDiy~~~y-----yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg 921 (1025)
T KOG1095|consen 847 GLARDIYDKDY-----YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG 921 (1025)
T ss_pred chhHhhhhchh-----eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC
Confidence 99994433322 222222233568999999999999999999999999999999 999998755432222222221
Q ss_pred hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 231 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 231 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
.+. .+..||..+.++|.+||+.+|++||+|..|++.+..++...
T Consensus 922 --RL~-----~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 922 --RLD-----PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --ccC-----CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 221 23689999999999999999999999999999888877544
No 245
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.6e-38 Score=305.02 Aligned_cols=253 Identities=20% Similarity=0.360 Sum_probs=202.6
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+..++|++.++||+|+||.||+|.+ ..+..||+|.+..... ...+.+|+.+++.+++ ++++.+..+... ...+++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH--DKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEe-cCCccEEEEecCCChhHHHHHHHHHHHHHhcCC--CCcceEEEEEcC-CCeEEE
Confidence 3568899999999999999999985 4566799998765432 2457789999988865 889888777766 678999
Q ss_pred EEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++... ...+++..++.++.||+.||.|||+.|++||||||+||++ +..+.+||+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeeccCC
Confidence 9999 78999998753 3458889999999999999999999999999999999999 47789999999999865432
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... ......++..|+|||++.+..++.++|||||||++|++++ |..||.+.... .....+......
T Consensus 156 ~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~~~~---- 222 (260)
T cd05073 156 EYT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALERGYRM---- 222 (260)
T ss_pred Ccc------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhCCCCC----
Confidence 211 1122346678999999998889999999999999999998 99999764332 222222221111
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 276 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 276 (475)
.....++.++.+++.+||..+|++||++.+|.++|+.
T Consensus 223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1224678999999999999999999999999998875
No 246
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-38 Score=312.58 Aligned_cols=249 Identities=17% Similarity=0.295 Sum_probs=201.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.++|++.++||+|+||+||++.+..+++.||+|++..... ...+..|++++..+.| ++++.+..++......++|
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS--PYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC--CCcceEeeeEecCCEEEEE
Confidence 3679999999999999999999999999999998765432 2457788888888865 9999999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||+ +++|.+++.. .+.+++..+..++.|++.||.|||+ ++|+||||||+||++ ++.+.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 82 MEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh
Confidence 9999 8899988874 4569999999999999999999997 699999999999999 47789999999998755332
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCC-----H---HHHHHHHhhc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-----K---KQKYEKISEK 232 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~-----~---~~~~~~i~~~ 232 (475)
.. ....|+..|+|||++.+..++.++|||||||++|+|++|..||....... . ...+..+...
T Consensus 158 ~~---------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd06620 158 IA---------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE 228 (284)
T ss_pred cc---------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc
Confidence 21 23578999999999998889999999999999999999999998643310 0 1111111111
Q ss_pred cccccHHHHh-cCChHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011882 233 KVSTSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 273 (475)
Q Consensus 233 ~~~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 273 (475)
. ...+. ..++.++.+++.+||..||++||++.++++.
T Consensus 229 ~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 229 P----PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred c----CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1 11111 1267899999999999999999999888653
No 247
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.6e-38 Score=311.08 Aligned_cols=260 Identities=21% Similarity=0.305 Sum_probs=204.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEcc----CCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEe--C
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQ----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVE--G 76 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~----~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~--~ 76 (475)
..+|++.+.||+|+||.||+|.+.. +++.||||++..... ...+..|+++++.+.+ ++++.+..++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~--~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH--ENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC--CChheEEeeeecCCC
Confidence 3578999999999999999998643 478999999876554 3467888888888865 889998888776 6
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
...+++|||+ +++|.+++......+++..++.++.||+.||+|||++||+|+||||+|||+ +.++.++|+|||++.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEccccccc
Confidence 6889999999 889999998655569999999999999999999999999999999999999 467899999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH-----------HH
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-----------KQ 224 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~-----------~~ 224 (475)
........ +.......++..|++||.+.+..++.++|||||||++|||++|..||........ ..
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05038 158 VLPEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVT 233 (284)
T ss_pred ccccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHH
Confidence 76532211 1111223456679999999988999999999999999999999999865322110 11
Q ss_pred HHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 225 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 225 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
.+.......... .....+|.++.+++.+||..+|++||++.+|++.|+.+
T Consensus 234 ~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 234 RLLELLKEGERL---PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHcCCcC---CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111111111111 11235678999999999999999999999999998865
No 248
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.4e-38 Score=304.86 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=194.1
Q ss_pred eeEeeeCceeEEEEEEcc---CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeE-eCCEEEEEEEc
Q 011882 13 RKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGV-EGDYNVLVIDL 85 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~---~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~-~~~~~~lvme~ 85 (475)
+.||+|+||.||+|.+.. .+..||||.+...... ..+..|..+++.+.| ++++.++.++. .+...+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSH--PNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCC--CCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998754 3457999987543322 356678888877765 88998887654 45678999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..++.++.||+.||.|||+.+|+||||||+|||+ +..+.+||+|||+++.+......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~~- 154 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYY- 154 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCcce-
Confidence 9 889999997655667888899999999999999999999999999999999 46788999999999865432210
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcC-CCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
.........++..|+|||.+.+..++.++|||||||++|||++| ..||..... ......+...... ....
T Consensus 155 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~ 225 (262)
T cd05058 155 --SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITVYLLQGRRL----LQPE 225 (262)
T ss_pred --eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHhcCCCC----CCCC
Confidence 01112234567889999999988999999999999999999995 566755322 2222222221111 1123
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
.+|..+.+++.+||..+|++||++.+|++.|++++.
T Consensus 226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 226 YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 468899999999999999999999999999998863
No 249
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-40 Score=309.77 Aligned_cols=265 Identities=19% Similarity=0.275 Sum_probs=216.2
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
--++|..+++||+|.||.|-+++.+.+++.||||+++.+... ..-.-|.++++..+| |.+..+...+...+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~H--PFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRH--PFLTSLKYSFQTQDRL 243 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccC--cHHHHhhhhhccCceE
Confidence 347899999999999999999999999999999998765322 234568888887766 8888888888899999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|+||||. ||.|.-.+.. .+.|++.....+...|+.||.|||+++||.||||.+|.|+ |++|++||+|||+++.-.
T Consensus 244 CFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcc
Confidence 9999999 8888777763 4579999999999999999999999999999999999999 799999999999998644
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.... ..+++|||+.|+|||++....|++++|+|.+||+||||++|++||...+. ...++-|....+
T Consensus 320 ~~g~-------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh---~kLFeLIl~ed~---- 385 (516)
T KOG0690|consen 320 KYGD-------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH---EKLFELILMEDL---- 385 (516)
T ss_pred cccc-------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---hHHHHHHHhhhc----
Confidence 3322 24689999999999999999999999999999999999999999987443 223333332222
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCC--HHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPD--YAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 297 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt--~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 297 (475)
.++..++++.+.|+..+|..||.+|.. .++..++.++-|. ..++|+..-.+
T Consensus 386 -kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF-------~~v~W~~~~~K 438 (516)
T KOG0690|consen 386 -KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFF-------ASVDWEATYRK 438 (516)
T ss_pred -cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhh-------ccCCHHHHHHh
Confidence 234678899999999999999999963 3556666665543 34688865443
No 250
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.9e-38 Score=308.25 Aligned_cols=247 Identities=20% Similarity=0.274 Sum_probs=195.8
Q ss_pred eeEeeeCceeEEEEEEccCCe--EEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~--~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+..++. .+++|.++.... ...+..|++++..+.+ |++++.+++++......++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH-HPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhcc-CCCeeeEEEEEecCCCceEEEEeCC
Confidence 368999999999999888775 468887764322 2356778888888854 389999999999999999999999
Q ss_pred CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeec
Q 011882 87 GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 151 (475)
Q Consensus 87 g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 151 (475)
+++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||+ +.++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECCC
Confidence 889999986432 247899999999999999999999999999999999999 47789999999
Q ss_pred CCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHh
Q 011882 152 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 230 (475)
Q Consensus 152 GlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~ 230 (475)
|++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||.+... ...+..+.
T Consensus 157 gl~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~~ 225 (270)
T cd05047 157 GLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLP 225 (270)
T ss_pred CCccccchhh--------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---HHHHHHHh
Confidence 9986322111 0112234667999999998889999999999999999997 9999976432 22233322
Q ss_pred hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 231 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 231 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
..... .....++.++.+++.+||..+|.+||++.+++..|++++
T Consensus 226 ~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 226 QGYRL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCCC----CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 21111 122356789999999999999999999999999998875
No 251
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.8e-38 Score=312.69 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=200.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|.+++..+.+ ++++.+++.+......|+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~l 78 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH--PFLPTLYASFQTETYLCL 78 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC--CCchhheeeeecCCEEEE
Confidence 4799999999999999999999889999999988755322 346778888888875 899999999999999999
Q ss_pred EEEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 82 VIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+|||+ |++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||+|+ .++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhhcccc
Confidence 99999 88999998753 35699999999999999999999999999999999999994 678999999999876543
Q ss_pred ccccccc----------------------ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 011882 160 TATHQHI----------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 217 (475)
Q Consensus 160 ~~~~~~~----------------------~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~ 217 (475)
....... .......+.||..|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2211000 000123457899999999999988999999999999999999999999764
Q ss_pred CCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCC
Q 011882 218 KAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 218 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 266 (475)
.. ...+..+........ ....++.++.+++.+||..+|++||+
T Consensus 236 ~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 236 NR---DETFSNILKKEVTFP---GSPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred ch---HHHHHHHhcCCccCC---CccccCHHHHHHHHHHccCCHhHCCC
Confidence 32 233333333222111 01226899999999999999999999
No 252
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.8e-38 Score=301.23 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=202.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.+++ ++++.++......+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH--PNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC--CchhheeeeEecCCEEEEEE
Confidence 59999999999999999999999999999998865432 2357778888888865 89999988888889999999
Q ss_pred EcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++ ++.+.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCc
Confidence 999 88999999754 34589999999999999999999999999999999999995 345678999999998764432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. .....|+..|+|||.+.+..++.++||||||+++|+|++|..||.+... ......+...... .+
T Consensus 157 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~~----~~ 221 (256)
T cd08220 157 K--------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKIMSGTFA----PI 221 (256)
T ss_pred c--------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHHHhcCCC----CC
Confidence 1 1235789999999999988899999999999999999999999976432 2223333222211 23
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.++.+++.+||..+|++||++.+++.
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 3567899999999999999999999988853
No 253
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=331.57 Aligned_cols=241 Identities=22% Similarity=0.315 Sum_probs=207.0
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
|.-++.||.|+||.||-|.+..+.+.||||.++...+ ..++..|+.+++.+.| ||++.+.+++..+...||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H--PntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH--PNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC--CCcccccceeeccchHHHHH
Confidence 6667889999999999999999999999998765543 3468899999999987 99999999999999999999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|||-||-.|++.-.++++.+.++..|..+.+.||.|||+++.||||||..||||+ +.+.|||+|||.|.....
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchhhcCc----
Confidence 9999999999988888999999999999999999999999999999999999995 889999999999976543
Q ss_pred cccccccCCCCccCccccccccccC---CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g---~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.+.|+||+.|||||+++. +.|+-++||||||++..||...++|+..+++... +..|.+...++..
T Consensus 179 -------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA---LYHIAQNesPtLq-- 246 (948)
T KOG0577|consen 179 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHIAQNESPTLQ-- 246 (948)
T ss_pred -------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH---HHHHHhcCCCCCC--
Confidence 356899999999999874 4699999999999999999999999988765332 2233333322211
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
...++..|..|+..||.+-|.+||+.++++
T Consensus 247 -s~eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 247 -SNEWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred -CchhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 134678999999999999999999988774
No 254
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.5e-38 Score=303.79 Aligned_cols=254 Identities=21% Similarity=0.308 Sum_probs=205.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.+.||.|+||+||+|.+..++..||+|++..... ...+..|+++++.+.+ ++++.+.......+..+++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH--PNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC--CCEEEEEEEEeeCCEEEEEE
Confidence 579999999999999999999988999999999865432 3457788888888765 89999998889999999999
Q ss_pred EcC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 84 DLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 84 e~~-g~sL~~ll~~~--~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|++ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||++ ++++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhccC
Confidence 999 88999998753 2468999999999999999999999999999999999999 46788999999999877654
Q ss_pred ccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
.... ........|+..|++||++... .++.++|||||||++|+|++|..||...... +.+.+........ ..
T Consensus 156 ~~~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~-~~ 228 (267)
T cd06610 156 GDRT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---KVLMLTLQNDPPS-LE 228 (267)
T ss_pred cccc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---hhHHHHhcCCCCC-cC
Confidence 3321 0122445789999999998877 6899999999999999999999999764332 2222222221111 11
Q ss_pred HH--hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 240 AL--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 240 ~l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.. ...+++++.+++..||..||++||++.+|++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11 1357889999999999999999999888754
No 255
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.4e-38 Score=301.59 Aligned_cols=244 Identities=20% Similarity=0.304 Sum_probs=195.7
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
++||+|+||.||+|.. .++..||+|+++..... ..+..|+.+++.+.| ++++.+..++......++||||+ ++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH--PNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC--CCcCeEEEEEecCCccEEEEECCCCC
Confidence 4789999999999985 57889999987654322 246678888888754 99999999999999999999999 89
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
+|.+++......+++..++.++.|++.||.|||++|++||||||+||++ +..+.+||+|||++.........
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~----- 149 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYS----- 149 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccc-----
Confidence 9999887555668999999999999999999999999999999999999 46788999999999754332110
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 247 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 247 (475)
......++..|+|||++.+..++.++|||||||++|++++ |..||.+.... .....+..... . .....++.
T Consensus 150 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~~~~~~~~~-~---~~~~~~~~ 221 (250)
T cd05085 150 -SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QAREQVEKGYR-M---SCPQKCPD 221 (250)
T ss_pred -cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCCC-C---CCCCCCCH
Confidence 1112344678999999998889999999999999999998 99999775332 22222222111 1 12345789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 248 EFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 248 ~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
.+.+++.+||..+|++||++.++.+.|.
T Consensus 222 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 222 DVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 9999999999999999999999987764
No 256
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.7e-38 Score=302.71 Aligned_cols=245 Identities=22% Similarity=0.323 Sum_probs=197.5
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
++||.|+||.||+|.+.. ++.||+|++...... ..+..|+.+++.+.+ ++++.+..++......++||||+ ++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH--PNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC--CCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 479999999999999876 999999987655432 357788888888875 89999999999999999999999 88
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
+|.+++......+++..++.++.|++.||.|||+++|+||||||+|||+ +.++.+||+|||++..........
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~---- 150 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTV---- 150 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCccee----
Confidence 9999987655678999999999999999999999999999999999999 577899999999998654221100
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 247 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 247 (475)
......++..|+|||.+.+..++.++|||||||++|||++ |..||......... ..+... ... .....+|.
T Consensus 151 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~---~~~~~~-~~~---~~~~~~~~ 222 (251)
T cd05041 151 -SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR---ERIESG-YRM---PAPQLCPE 222 (251)
T ss_pred -ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH---HHHhcC-CCC---CCCccCCH
Confidence 0112234677999999998889999999999999999998 89999775432222 222111 111 11245789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 248 EFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 248 ~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
++.+++.+||..+|++||++.+|++.|+
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 9999999999999999999999988875
No 257
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=301.01 Aligned_cols=249 Identities=19% Similarity=0.324 Sum_probs=207.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchH---HHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ---LQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~---~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++.+++..||.|.-|+||+++.+.+|..+|||.+......++ +.....++.. .+.++.|+..++++..+...+|+|
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~-s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLK-SHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhh-ccCCCeeeeeeeEEeeCchHHHHH
Confidence 456678899999999999999999999999999877655443 3334444433 344599999999999999999999
Q ss_pred EcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+|...++.++....+++++..+-++...++.||.||-+ +|||||||||+|||+ |..|+|||||||++-.+.+...
T Consensus 171 elMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 171 ELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecccc
Confidence 999999999999888899999999999999999999997 689999999999999 6899999999999988877654
Q ss_pred ccccccccCCCCccCccccccccccCC---CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~---~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
+ ....|.+.|||||.+.-. .|+.++||||||++|+||+||+.||.+.+ +..+.+.++..... +.++
T Consensus 248 h--------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~--tdFe~ltkvln~eP-P~L~ 316 (391)
T KOG0983|consen 248 H--------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK--TDFEVLTKVLNEEP-PLLP 316 (391)
T ss_pred c--------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC--ccHHHHHHHHhcCC-CCCC
Confidence 3 345899999999998643 58999999999999999999999998854 34555666655333 2222
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. ..++++.|.+++..||.+|+.+||.|.+|+
T Consensus 317 ~-~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll 347 (391)
T KOG0983|consen 317 G-HMGFSPDFQSFVKDCLTKDHRKRPKYNKLL 347 (391)
T ss_pred c-ccCcCHHHHHHHHHHhhcCcccCcchHHHh
Confidence 1 245899999999999999999999998874
No 258
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.9e-38 Score=308.21 Aligned_cols=235 Identities=23% Similarity=0.325 Sum_probs=199.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||++.+..+++.||||++.... ....+..|+++++.+.| ++++.++.++..+...++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH--PFLVNLYGSFQDDSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--CCccceeeEEEcCCeEEE
Confidence 57999999999999999999999999999999876432 22457778899888874 999999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+|||+ +++|.+++... ..+++..+..++.||+.||.|||++||+|+||||.|||| +.++.+||+|||+++.....
T Consensus 79 v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 79 VMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred EEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCC
Confidence 99999 99999998753 579999999999999999999999999999999999999 46789999999999876443
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||.... .......+..... .
T Consensus 155 ----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~-----~ 216 (290)
T cd05580 155 ----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---PIQIYEKILEGKV-----R 216 (290)
T ss_pred ----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCc-----c
Confidence 124578999999999998889999999999999999999999997643 2333333332221 1
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCC
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKP 265 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RP 265 (475)
+...++..+.+++.+||..+|.+|+
T Consensus 217 ~~~~~~~~l~~li~~~l~~~p~~R~ 241 (290)
T cd05580 217 FPSFFSPDAKDLIRNLLQVDLTKRL 241 (290)
T ss_pred CCccCCHHHHHHHHHHccCCHHHcc
Confidence 2345689999999999999999998
No 259
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-37 Score=305.05 Aligned_cols=253 Identities=22% Similarity=0.289 Sum_probs=200.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+|++.++||.|++|.||+|++..+++.||||.++.... ...+..|+.+++.++| ++++.+..++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH--ENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC--CCEeeeeeeEeeCCcEEEEEe
Confidence 59999999999999999999999999999998765432 3456789999998865 899999999999999999999
Q ss_pred cCCCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LLGPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~g~sL~~ll~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||++ ++++.++|+|||++........
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 79 YMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred cCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCCcc
Confidence 99889999886543 458999999999999999999999999999999999999 4778999999999976543211
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV------- 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~------- 234 (475)
......++..|++||++.+. .++.++|||||||++|+|++|..||.+.........+........
T Consensus 156 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07836 156 -------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGI 228 (284)
T ss_pred -------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHH
Confidence 11234578899999998764 478999999999999999999999987543222111111100000
Q ss_pred --------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 235 --------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 235 --------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
......+...++.++.+++..||+.||.+||++.+|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 01112223456788999999999999999999888753
No 260
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.3e-38 Score=311.59 Aligned_cols=252 Identities=16% Similarity=0.270 Sum_probs=197.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.+|+..++||+|+||.||++.+..+++.||||.+...... ..+..|..++..+.. |++++.+++++......+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~-~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSD-CPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcC-CCCEeeeeeEEecCCcEEEEE
Confidence 4677889999999999999999999999999987654322 346677777776653 389999999888888999999
Q ss_pred EcCCCCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 84 DLLGPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 84 e~~g~sL~~ll~~----~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
||++.+|.++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+ +..+.+||+|||+++.+.
T Consensus 83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHHhc
Confidence 9998888776542 23569999999999999999999997 599999999999999 467889999999998654
Q ss_pred ccccccccccccCCCCccCccccccccccCC---CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~---~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
.... .....|+..|+|||++.+. .++.++|||||||++|||++|..||.... ...+.+.++......
T Consensus 160 ~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~ 229 (288)
T cd06616 160 DSIA--------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPP 229 (288)
T ss_pred cCCc--------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCC
Confidence 4321 1233688999999999876 68999999999999999999999997643 122222222221111
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.........++.++.+|+.+||..+|++||++.+|+.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111112347889999999999999999999988753
No 261
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.2e-38 Score=309.15 Aligned_cols=246 Identities=21% Similarity=0.344 Sum_probs=201.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
...|+..++||.|+||.||+|.+..+++.||||++...... ..+..|+.++..+.| ++++.+.+++......++|
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--PYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC--CCEeeEEEEEEECCEEEEE
Confidence 35688999999999999999999889999999987754322 346678888887765 8999999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|.+++. ..++++..+..++.|++.||.|||+.+|+|+||+|+||++ +..+.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 81 MEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCc
Confidence 9999 889999886 3568999999999999999999999999999999999999 467889999999997664322
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. ......++..|+|||++.+..++.++|||||||++|||++|..||...... .....+..... +.+
T Consensus 156 ~-------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~----~~~ 221 (277)
T cd06640 156 I-------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM---RVLFLIPKNNP----PTL 221 (277)
T ss_pred c-------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH---hHhhhhhcCCC----CCC
Confidence 1 112346888999999999988999999999999999999999999764332 11222211111 122
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++..+.+++.+||..+|++||++.+++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 222 TGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred chhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 3456789999999999999999999998843
No 262
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.4e-38 Score=306.74 Aligned_cols=253 Identities=21% Similarity=0.238 Sum_probs=200.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++++.||.|+||.||+|.+..+++.||||.+...... ..+..|+++++.++| ++++.+..++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH--PNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC--CCCcchhhhcccCCcEEEEe
Confidence 589999999999999999999999999999987654322 357789999998876 89999999999999999999
Q ss_pred EcCCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+.++|.+++... ...+++..++.++.||+.||+|||+++|+||||||+||++ +.++.+||+|||++..+.....
T Consensus 79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCcc
Confidence 99988998888653 3468999999999999999999999999999999999999 5778999999999976543211
Q ss_pred ccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc---------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--------- 232 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~--------- 232 (475)
......++..|+|||++.+.. ++.++|||||||++|||++|..||.+.........+......
T Consensus 156 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 156 -------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred -------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 112335788999999987755 588999999999999999999999764322111111110000
Q ss_pred ------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 ------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 ------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
........+...++.++.++|.+||..||.+||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0011122233456789999999999999999999888753
No 263
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-37 Score=306.04 Aligned_cols=255 Identities=21% Similarity=0.272 Sum_probs=201.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|++.++||+|+||.||+|.+..+++.||||.++... ....+..|+++++.+.+ ++++.+.+++...+..+++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH--ENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC--CCeeehhheEEECCEEEEE
Confidence 47999999999999999999999999999999876432 23467889999998885 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||+++++.+.+......+++.++..++.||+.||.|||+++|+|+||||+||++ ++.+.+||+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCcc
Confidence 9999666655554455669999999999999999999999999999999999999 4688999999999987654332
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh----------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---------- 231 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~---------- 231 (475)
. ......++..|+|||++.+. .++.++||||||+++|+|++|..||.+............+..
T Consensus 156 ~------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 156 S------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred c------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhc
Confidence 1 11345788999999999988 789999999999999999999999976432211111111000
Q ss_pred -------------ccccccHHH-HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 -------------KKVSTSIEA-LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 -------------~~~~~~~~~-l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.......+. ....++.++.+++.+||..+|++||++++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000001111 12234889999999999999999999888753
No 264
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.2e-38 Score=319.02 Aligned_cols=249 Identities=22% Similarity=0.275 Sum_probs=195.8
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--- 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--- 76 (475)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+++ ++++.+..++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~ 90 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH--KNIIGLLNVFTPQKSL 90 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC--CCCcceeeeeccCCCc
Confidence 46788999999999999999999999999999999875432 12346678888888876 8888887765432
Q ss_pred ---CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 ---DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ---~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
...|+||||++++|.+.+.. .++...+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCcc
Confidence 35799999998899988763 38999999999999999999999999999999999999 5778999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
++....... .....|+..|+|||++.+..++.++|||||||++|+|++|..||...... ..+.++....
T Consensus 165 ~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~~ 233 (353)
T cd07850 165 ARTAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI---DQWNKIIEQL 233 (353)
T ss_pred ceeCCCCCC--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHhc
Confidence 986543211 12346889999999999999999999999999999999999999764321 1111111100
Q ss_pred cc-------------------------ccHHHH-------------hcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 234 VS-------------------------TSIEAL-------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 234 ~~-------------------------~~~~~l-------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.. .....+ ....+.++.++|.+||..||++||++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL 309 (353)
T cd07850 234 GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL 309 (353)
T ss_pred CCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence 00 000010 113466789999999999999999988874
No 265
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.8e-37 Score=306.30 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=199.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|++.+.||.|+||.||+|.+..+++.||||.+..... ...+..|+++++.+.| ++++.++.++......|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--GNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC--CCEeeEEEEEecCCeEEEE
Confidence 679999999999999999999999999999998765422 2457789999998865 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||++++|.+.+..... .+++..+..++.||+.||+|||+++|+||||||+||+++ ...+.+||+|||++.......
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEcccccccccCCCc
Confidence 99998899888764332 368889999999999999999999999999999999995 345679999999997653321
Q ss_pred cccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-------
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------- 233 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------- 233 (475)
. ......++..|+|||.+.+. .++.++|||||||++|+|++|..||...........+.......
T Consensus 158 ~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 158 R-------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred c-------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 1 11234678999999998764 47899999999999999999999997643221111111100000
Q ss_pred --------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 --------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 --------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...........+++++.+++.+||..+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011112223457889999999999999999999888854
No 266
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-37 Score=301.09 Aligned_cols=249 Identities=21% Similarity=0.283 Sum_probs=201.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.+|++.+.||+|+||.||+|.+. .+..+|||++..... ...+..|+++++.+.+ ++++.++.++......+++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH--PKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC--CCeeeEEEEEccCCceEEEEEc
Confidence 57999999999999999999874 467899998765433 3568889999998865 8899999888888899999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..++.++.|++.||.|||+++|+||||||+||++ +.++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~- 156 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDDQYT- 156 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecccCccc-
Confidence 9 889999987656678999999999999999999999999999999999999 46788999999999765432111
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ...+..+...... . ...
T Consensus 157 -----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~-~---~~~ 224 (256)
T cd05112 157 -----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVETINAGFRL-Y---KPR 224 (256)
T ss_pred -----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHhCCCCC-C---CCC
Confidence 1122345678999999998889999999999999999998 9999976332 2233333221110 0 123
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
..+.++.+++.+||..+|++||++.++++.|
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 3678999999999999999999999998765
No 267
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7.2e-38 Score=304.10 Aligned_cols=252 Identities=20% Similarity=0.332 Sum_probs=201.3
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--------hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--------PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--------~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
+|++.+.||.|+||.||+|.+ .+++.||||++...... ..+.+|+.+++.+.+ ++++.+.+++.+.+..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~ 77 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH--VNIVQYLGTCLDDNTI 77 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC--CCEeeEeeEeecCCeE
Confidence 589999999999999999986 57889999987654321 346778888888875 8999999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
+++|||+ +++|.+++.. ...+++..+..++.||+.||.|||+.+|+|+||||+||++ +..+.++|+|||++....
T Consensus 78 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 78 SIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhh
Confidence 9999999 8899999874 3468999999999999999999999999999999999999 577899999999998653
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
....... .........|+..|+|||++.+..++.++|||||||++|+|++|..||...... .....+... ....
T Consensus 154 ~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~--~~~~ 227 (265)
T cd06631 154 WVGLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL---AAMFYIGAH--RGLM 227 (265)
T ss_pred hcccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH---HHHHHhhhc--cCCC
Confidence 3211110 001123457899999999999988999999999999999999999999764321 111111111 1112
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
+.+...++.++.+++.+||..+|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2344678899999999999999999999988753
No 268
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-37 Score=308.89 Aligned_cols=259 Identities=21% Similarity=0.241 Sum_probs=200.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEcc--CCeEEEEEEeccC-----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQ--TNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DY 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~--~~~~vAvKi~~~~-----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~ 78 (475)
+|++.++||+|+||.||+|.+.. +++.||||++... .....+..|+.++..++| ++++.++.++... ..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 78 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH--ENVVSLVEVFLEHADKS 78 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC--CCccceEEEEeCCCCce
Confidence 58999999999999999999988 8999999988762 234567789999888876 8999999888877 88
Q ss_pred EEEEEEcCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEee-CCCCCcEEEeecCC
Q 011882 79 NVLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL-GRRANQVYIIDFGL 153 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~-~~~~~~vkL~DFGl 153 (475)
.++||||++++|.+++.... ..+++..++.|+.||+.||.|||+++|+||||||+|||++. ++..+.+||+|||+
T Consensus 79 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 79 VYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 99999999889988876432 25899999999999999999999999999999999999953 11278999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCC------HHHHH
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKY 226 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~------~~~~~ 226 (475)
++.+...... ........++..|+|||++.+. .++.++|||||||+||+|++|..||.+..... ....+
T Consensus 159 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 159 ARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred ccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 9876443221 1122345789999999998774 47999999999999999999999998654322 00011
Q ss_pred HHHhhc----------------------------ccc-ccHHH-Hh--cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 227 EKISEK----------------------------KVS-TSIEA-LC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 227 ~~i~~~----------------------------~~~-~~~~~-l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..+... ... ..... +. ...+.++.+++.+||..||++||++.++++
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111000 000 00111 11 145678999999999999999999988753
No 269
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.6e-38 Score=302.74 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=197.7
Q ss_pred eeEeeeCceeEEEEEEcc-CC--eEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQ-TN--EEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~-~~--~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
++||+|+||.||+|.+.. .+ ..||||.+..... ...+..|..++..++| ++++.++.+... ...+++|||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDH--ENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCC--CCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999865 33 3699998876544 2357778888888865 889999888777 8899999999
Q ss_pred -CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 87 -GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 87 -g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+++.+......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc-
Confidence 889999987544 4689999999999999999999999999999999999994 6689999999999876543221
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
+.......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+.+..+...... .....
T Consensus 154 ---~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~~~---~~~~~ 224 (257)
T cd05040 154 ---YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---SQILKKIDKEGER---LERPE 224 (257)
T ss_pred ---eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhcCCc---CCCCc
Confidence 111223467889999999999899999999999999999998 9999976433 2333333221111 11224
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
.+|..+.+++..||..+|++||++.+|++.|.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 57899999999999999999999999988774
No 270
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.7e-38 Score=307.08 Aligned_cols=253 Identities=23% Similarity=0.264 Sum_probs=198.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
++|++.++||+|+||.||+|.+..+++.||+|++..... ...+..|++++..+.| ++++.+..++..+...++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH--ENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC--cchhhHHHhcccCCeEEEE
Confidence 579999999999999999999988999999998654332 2356778888888765 8999999999999999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|..+.. ....+++..++.++.||+.||.|||+.||+|+||+|+||++ ++++.++|+|||++..+....
T Consensus 79 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 79 FEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred EecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCc
Confidence 9999 556666554 34469999999999999999999999999999999999999 477899999999998654432
Q ss_pred cccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh---------
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE--------- 231 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~--------- 231 (475)
. ......++..|+|||++.+. .++.++|||||||++|||++|..||...........+..+..
T Consensus 155 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 155 E-------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred c-------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHH
Confidence 1 11235688999999998764 478899999999999999999999976432111111111000
Q ss_pred --------------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 --------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 --------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
............+++..+.+++.+||..+|++||++.+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00011122234567899999999999999999999988753
No 271
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9e-38 Score=309.65 Aligned_cols=248 Identities=22% Similarity=0.312 Sum_probs=200.4
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..+|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|..+++.+.| ++++.+.+++..++..++||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN--PNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCEEEEee
Confidence 47899999999999999999999999999999988654332 346667777776655 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++.. ..+++..++.++.|++.||.|||+.||+||||||+|||+ +.++.++|+|||++........
T Consensus 96 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 96 EYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred cccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEccCCcc
Confidence 999 8899998863 468999999999999999999999999999999999999 4778999999999976543321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+...... ...+..... ......
T Consensus 171 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---~~~~~~~~~--~~~~~~ 238 (297)
T cd06656 171 -------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGT--PELQNP 238 (297)
T ss_pred -------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---eeeeccCCC--CCCCCc
Confidence 11234789999999999998899999999999999999999999976432111 111111000 000112
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..++..+.+++.+||..+|++||++.+|++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 456788999999999999999999887754
No 272
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.8e-38 Score=303.89 Aligned_cols=253 Identities=21% Similarity=0.340 Sum_probs=200.5
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEe------C
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVE------G 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~------~ 76 (475)
.-.++|++.+.||+|+||.||+|.+..+++.|++|++..... ...+..|..+++.+.. |++++.++.++.. .
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~-h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSN-HPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcC-CCChheEEEEEEecCCCCcc
Confidence 446899999999999999999999988999999999876543 3457788888888854 3999999888765 3
Q ss_pred CEEEEEEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
...++||||+ +++|.+++... +..+++..+..++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECCCc
Confidence 4589999999 78999988653 35799999999999999999999999999999999999994 67889999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCC-----CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 227 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-----~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~ 227 (475)
++........ ......|+..|+|||++.+. .++.++|||||||+||+|++|..||..... ...+.
T Consensus 159 ~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~ 228 (275)
T cd06608 159 VSAQLDSTLG-------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP---MRALF 228 (275)
T ss_pred cceecccchh-------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch---HHHHH
Confidence 9976543222 11335689999999988643 367899999999999999999999975432 22222
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+......... ....++.++.+++.+||..||++||++.+|++
T Consensus 229 ~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRNPPPTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HhhccCCCCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 22222111110 11236789999999999999999999988854
No 273
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1e-37 Score=309.73 Aligned_cols=263 Identities=22% Similarity=0.245 Sum_probs=200.8
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEe----
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVE---- 75 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~---- 75 (475)
...++|++.++||+|+||.||+|.+..+++.||||++..... .....+|+++++.++| ++++.+..+..+
T Consensus 5 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~ 82 (311)
T cd07866 5 SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKH--PNVVPLIDMAVERPDK 82 (311)
T ss_pred cccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCC--CCccchhhheeccccc
Confidence 346899999999999999999999999999999998754432 2356789999998876 888888766543
Q ss_pred ----CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeec
Q 011882 76 ----GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 151 (475)
Q Consensus 76 ----~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 151 (475)
....++||+|++.+|...+......+++..+..++.||+.||.|||++||+|+||||+|||+ ++++.++|+||
T Consensus 83 ~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~df 159 (311)
T cd07866 83 SKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADF 159 (311)
T ss_pred ccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcC
Confidence 33579999999889988887555679999999999999999999999999999999999999 57889999999
Q ss_pred CCccccccccccccc----ccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHH
Q 011882 152 GLAKRYRDTATHQHI----PYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY 226 (475)
Q Consensus 152 GlA~~~~~~~~~~~~----~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~ 226 (475)
|+++........... .........|+..|+|||.+.+. .++.++|||||||++|||++|..||.+.......+.+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999876543221110 01112345678999999988764 4789999999999999999999999764432222222
Q ss_pred HHHhh----------------------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 227 EKISE----------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 227 ~~i~~----------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..... .............+...+.+++.+||..||++||++.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 11110 0011111222234557899999999999999999988774
No 274
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.2e-37 Score=306.08 Aligned_cols=239 Identities=23% Similarity=0.309 Sum_probs=187.6
Q ss_pred eEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHh-CCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQ-GGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~-~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
.||+|+||.||++.+..+++.||||.+...... .....|..+++.+. ..|++++.+..+...++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999987643221 12344555555543 24588888888888888999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++.. ...+++..+..|+.||+.||.|||+++|+||||||+|||+ +.++.++|+|||++..+.....
T Consensus 81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~~---- 152 (279)
T cd05633 81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP---- 152 (279)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccCc----
Confidence 8899988864 4569999999999999999999999999999999999999 5778999999999975543211
Q ss_pred ccccCCCCccCcccccccccc-CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 167 PYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~-g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
....||..|+|||.+. +..++.++|||||||++|||++|..||......... .+...... ....++..+
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~----~~~~~~~~~ 222 (279)
T cd05633 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLT----VNVELPDSF 222 (279)
T ss_pred -----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhhc----CCcCCcccc
Confidence 2346899999999987 456899999999999999999999999865433322 22221111 111234567
Q ss_pred hHHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011882 246 PTEFASYFHYCRSLRFDDKP-----DYAYL 270 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RP-----t~~~l 270 (475)
+.++.++|.+||..||.+|| +++++
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~ 252 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEV 252 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHH
Confidence 89999999999999999999 46655
No 275
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.1e-37 Score=309.45 Aligned_cols=259 Identities=20% Similarity=0.220 Sum_probs=197.0
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC---
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD--- 77 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~--- 77 (475)
..++|++.++||+|+||.||+|.+..+++.||||.+...... .....|+.+++.+.| ++++.++.++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKH--ENVVNLIEICRTKATPY 87 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCC--CCccceEEEEecccccc
Confidence 346799999999999999999999999999999987543322 235678888888865 88998887765443
Q ss_pred -----EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 78 -----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 78 -----~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
..++||||++++|.+++......+++.+++.++.||+.||.|||++||+|+||||+|||+ +..+.+||+|||
T Consensus 88 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg 164 (310)
T cd07865 88 NRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFG 164 (310)
T ss_pred cCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCC
Confidence 459999999989999887655579999999999999999999999999999999999999 477899999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
++..+....... ........++..|+|||.+.+.. ++.++||||||+++|||++|..||.+.........+..+..
T Consensus 165 ~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 165 LARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred CcccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 998765432211 01123346789999999987654 78999999999999999999999976443222222222110
Q ss_pred ccc------------------ccc-----HHHHh-cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 232 KKV------------------STS-----IEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 232 ~~~------------------~~~-----~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
... ... ...+. ...+..+.++|.+||..||.+||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 000 000 00000 01246678999999999999999988875
No 276
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.6e-38 Score=303.13 Aligned_cols=239 Identities=18% Similarity=0.224 Sum_probs=188.5
Q ss_pred eeEeeeCceeEEEEEEccCC----------eEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTN----------EEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~----------~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
+.||+|+||.||+|.+..++ ..|++|++..... ...+.+|..+++.+.| ++++.+.+++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH--KHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC--cchhheeeEEec-CCcEE
Confidence 47899999999999987766 4588887665443 4567788888888765 899999888877 77899
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC----CCCcEEEeecCCccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----RANQVYIIDFGLAKR 156 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~----~~~~vkL~DFGlA~~ 156 (475)
||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.+. ....+||+|||++..
T Consensus 78 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 99999 8899999876555799999999999999999999999999999999999996322 112799999999986
Q ss_pred ccccccccccccccCCCCccCccccccccccCC--CCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~--~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
.... ....++..|+|||++.+. .++.++|||||||++|||++ |..||...........+. ...
T Consensus 158 ~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~ 223 (259)
T cd05037 158 VLSR-----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQH 223 (259)
T ss_pred cccc-----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCC
Confidence 5431 123567789999999887 78999999999999999999 688887754322222211 110
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
. +.......+.+++.+||..+|++||++.+|++.|
T Consensus 224 ~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 224 R------LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred C------CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 0111237899999999999999999999998765
No 277
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.3e-38 Score=304.37 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=190.5
Q ss_pred eeEeeeCceeEEEEEEc--cCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~--~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.+. .++..+|+|.++..... ..+..|+.+++.++| ++++.+.+++.+....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH--SNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC--CCEeeEEEEEcCCCCcEEEEECCC
Confidence 46899999999999864 34568999987654432 246678888888865 89999998888888899999999
Q ss_pred CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 87 GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 87 g~sL~~ll~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
+++|.+++.... ..+++..++.++.|++.||.|||+++|+||||||+||+++ ..+.+||+|||+++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcce
Confidence 789999986432 2467778899999999999999999999999999999994 678899999999975432211
Q ss_pred ccccccccCCCCccCccccccccccCC-------CCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-------EQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-------~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
+.......|+..|+|||++.+. .++.++|||||||++|||++ |..||......... ...+.....
T Consensus 156 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~--~~~~~~~~~ 228 (269)
T cd05087 156 -----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL--TYTVREQQL 228 (269)
T ss_pred -----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH--HHHhhcccC
Confidence 1112335678899999998643 35789999999999999996 99999765432111 111222222
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
....+.+...++..+.+++..|| .+|++||++++|...|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22222333457789999999999 68999999999987764
No 278
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8e-38 Score=308.66 Aligned_cols=256 Identities=20% Similarity=0.233 Sum_probs=201.0
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEG--DY 78 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~ 78 (475)
..++|++.+.||.|+||.||+|.+..+++.||||.++...... .+..|+.++..+.| ++++.+..+.... ..
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~~~~ 80 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH--PNIVTVKEVVVGSNLDK 80 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC--CCEEEEEEEEEecCCCc
Confidence 3468999999999999999999999899999999886543322 35678888888874 9999998887766 89
Q ss_pred EEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
.|+||||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||+ +..+.+||+|||++..+.
T Consensus 81 ~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 81 IYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYG 157 (293)
T ss_pred EEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeecc
Confidence 99999999889999988666679999999999999999999999999999999999999 477899999999998765
Q ss_pred ccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--- 234 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--- 234 (475)
.... ......++..|+|||.+.+.. ++.++|||||||++|+|++|..||..........++........
T Consensus 158 ~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (293)
T cd07843 158 SPLK-------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKI 230 (293)
T ss_pred CCcc-------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Confidence 4321 112346788999999987654 68999999999999999999999976443222221111100000
Q ss_pred -------------------cccHHHHhcC--ChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 235 -------------------STSIEALCRG--YPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 235 -------------------~~~~~~l~~~--~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...+...... +++.+.++|.+||..+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000111111 4788999999999999999999888854
No 279
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-38 Score=334.07 Aligned_cols=256 Identities=20% Similarity=0.245 Sum_probs=188.1
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCC-eEEEEE------------------EeccC-CCchHHHHHHHHHHHHhCCCC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIK------------------LENVK-TKHPQLQYEAKLYKILQGGST 64 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~-~~vAvK------------------i~~~~-~~~~~~~~E~~il~~l~~~~~ 64 (475)
+.++|+++++||+|+||+||+|..+... ..+++| .+... .....+.+|+.++..++| +
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H--p 223 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH--E 223 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC--C
Confidence 4578999999999999999998764322 222222 11111 112346788888888876 9
Q ss_pred CcCeeEEeeEeCCEEEEEEEcCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC
Q 011882 65 GIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 140 (475)
Q Consensus 65 ~i~~l~~~~~~~~~~~lvme~~g~sL~~ll~~~----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~ 140 (475)
||+.++.++...+..|++|++++++|.+++... ........++.|+.||+.||.|||++|||||||||+||||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl--- 300 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL--- 300 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---
Confidence 999999999999999999999988888877532 1224567788999999999999999999999999999999
Q ss_pred CCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011882 141 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 220 (475)
Q Consensus 141 ~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~ 220 (475)
+..+.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||+||||++|..++.+....
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREA------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred CCCCCEEEEeCCCceecCccccc------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 47789999999999876543221 123467999999999999999999999999999999999987654332222
Q ss_pred CHHHHHHHHhhc------cc-------------------cccHHHHh--cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 221 TKKQKYEKISEK------KV-------------------STSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 221 ~~~~~~~~i~~~------~~-------------------~~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.....+.++... .+ ...+..+. ..++..+.++|.+||..||.+||++.+++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 222222211110 00 00111111 24577889999999999999999999884
No 280
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.6e-37 Score=301.93 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=196.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-------hHHHHHHHHHHHHhCCCCCcCeeEEeeEe--CC
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLQYEAKLYKILQGGSTGIPNLRWFGVE--GD 77 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-------~~~~~E~~il~~l~~~~~~i~~l~~~~~~--~~ 77 (475)
.+|++.++||+|+||.||+|.+..+++.||||.+...... ..+..|+.+++.+.| ++++.+.+++.+ ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~ 79 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH--ERIVQYYGCLRDPMER 79 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC--CCeeeEEeEeccCCCc
Confidence 5799999999999999999999999999999987543211 246678888888865 899998887655 35
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..+++|||+ +++|.+++... ..+++..++.++.||+.||.|||+++|+|+||||+|||+ +..+.++|+|||+++.
T Consensus 80 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 80 TLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKR 155 (265)
T ss_pred eEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccc
Confidence 788999999 88999998743 468999999999999999999999999999999999999 4778999999999986
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
+...... ........|+..|+|||++.+..++.++|||||||++|||++|..||..... ...+..+......
T Consensus 156 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~- 227 (265)
T cd06652 156 LQTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPTN- 227 (265)
T ss_pred ccccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHHHHHHhcCCCC-
Confidence 5432110 0112335689999999999998899999999999999999999999976422 2222222221111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..+...++..+.+++..|| .+|++||++++|++
T Consensus 228 --~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 228 --PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred --CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 1122345678999999999 49999999988753
No 281
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.2e-37 Score=304.19 Aligned_cols=252 Identities=18% Similarity=0.315 Sum_probs=203.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~-----~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
++|+++++||.|+||.||+|+++.+ .+.|++|.+...... ..+..|+++++.+.| ++++.++.++.+...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH--KNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC--cceeeeEEEECCCCc
Confidence 6799999999999999999997543 467999987654433 457889999998865 899999999988899
Q ss_pred EEEEEEcC-CCCHHHHHHHcC--------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS--------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~--------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
.++||||+ +++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||++ ..+.++|+
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEEc
Confidence 99999999 789999987433 1589999999999999999999999999999999999994 67889999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~ 228 (475)
|||+++....... .......++..|++||.+.+..++.++|||||||++|+|++ |..||..... ...+..
T Consensus 160 ~~~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~ 230 (275)
T cd05046 160 LLSLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNR 230 (275)
T ss_pred ccccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHH
Confidence 9999875432211 11233466788999999998889999999999999999998 8899976432 233333
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
+........ ....+|..+.+++.+||..+|++||++.+++..|.
T Consensus 231 ~~~~~~~~~---~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGKLELP---VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCCcCCC---CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 332222111 12467899999999999999999999999988764
No 282
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.1e-37 Score=299.11 Aligned_cols=246 Identities=21% Similarity=0.245 Sum_probs=203.8
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.++||+|+||.||++.+..+++.||||.+.... ....+..|+.+++.+++ ++++.+..+....+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH--PNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC--CCeeeeEeeecCCCeEEEEE
Confidence 5999999999999999999999999999999876432 22357788888888876 88999999999999999999
Q ss_pred EcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||+|+|||+ +.++.++|+|||++..+....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcch
Confidence 999 889999887533 358999999999999999999999999999999999999 467889999999998664432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
.. .....|+..|+|||++.+..++.++|||||||++|+|++|..||... .....+..+...... ..
T Consensus 156 ~~-------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~~~~~~~~~----~~ 221 (256)
T cd08218 156 EL-------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG---NMKNLVLKIIRGSYP----PV 221 (256)
T ss_pred hh-------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC---CHHHHHHHHhcCCCC----CC
Confidence 11 12346889999999999988999999999999999999999999753 233334443333222 12
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.++.++|.+||+.+|++||++.+|++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 222 SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3467899999999999999999999988864
No 283
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.9e-37 Score=304.41 Aligned_cols=252 Identities=19% Similarity=0.308 Sum_probs=198.3
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC-----CE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG-----DY 78 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~-----~~ 78 (475)
..++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+..|..+++.+.. |++++.++.++... ..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~-h~ni~~~~~~~~~~~~~~~~~ 98 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPN-HPNVVKFYGMFYKADKLVGGQ 98 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcC-CCCeEEEEEEEEeccccCCCe
Confidence 35789999999999999999999999999999998865432 3456778888887743 48999988877643 36
Q ss_pred EEEEEEcC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 79 NVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
.++||||+ +++|.++++. ....+++..++.++.|++.||.|||++||+||||||+||++ +..+.+||+|||++
T Consensus 99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~dfg~~ 175 (291)
T cd06639 99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVDFGVS 175 (291)
T ss_pred eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEeecccc
Confidence 89999999 8899998863 34568999999999999999999999999999999999999 46788999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCC-----CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 229 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-----~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i 229 (475)
..+...... .....|+..|+|||.+.... ++.++|||||||++|||++|..||..... ...+..+
T Consensus 176 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~---~~~~~~~ 245 (291)
T cd06639 176 AQLTSTRLR-------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP---VKTLFKI 245 (291)
T ss_pred hhccccccc-------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH---HHHHHHH
Confidence 865432211 12346899999999986543 68999999999999999999999976432 2223333
Q ss_pred hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 230 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 230 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
........ .....++..+.+++.+||..+|++||++.+|++
T Consensus 246 ~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 246 PRNPPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hcCCCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 22211110 012345678999999999999999999888754
No 284
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.2e-37 Score=303.29 Aligned_cols=249 Identities=18% Similarity=0.265 Sum_probs=189.0
Q ss_pred eeEeeeCceeEEEEEEcc--CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQ--TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~--~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|.... ....||+|.+...... ..+..|+.+++.+.| ++|+.+++.+......++||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h--~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH--PNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC--CCcceEEEEECCCCceEEEEEeCC
Confidence 469999999999997533 3457889976543322 245678888887754 99999999988889999999999
Q ss_pred CCCHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 87 GPSLEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 87 g~sL~~ll~~~~~----~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
+++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccchh
Confidence 8899999875432 25678889999999999999999999999999999999 5778999999999875432211
Q ss_pred ccccccccCCCCccCccccccccccC-------CCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHH-Hhhcc
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLG-------IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK-ISEKK 233 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g-------~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~-i~~~~ 233 (475)
+.......++..|+|||++.. ..++.++|||||||++|||++ |..||..... .+.+.. +....
T Consensus 156 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~ 227 (269)
T cd05042 156 -----YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---EQVLKQVVREQD 227 (269)
T ss_pred -----eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhhccC
Confidence 001123356778999998743 356889999999999999998 8899976432 222222 22222
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
.....+.+...++..+.+++..|| .||++||++++|.++|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 IKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 222223345568899999999999 59999999999988763
No 285
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-37 Score=302.60 Aligned_cols=248 Identities=24% Similarity=0.345 Sum_probs=195.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-------chHHHHHHHHHHHHhCCCCCcCeeEEeeEe--CC
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLQYEAKLYKILQGGSTGIPNLRWFGVE--GD 77 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~--~~ 77 (475)
.+|++.+.||+|+||.||+|.+..++..||+|.+..... ...+..|+.+++.++| ++++.+..+... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~ 79 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQH--ERIVQYYGCLRDRAEK 79 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCC--CCeeeEEEEEEcCCCC
Confidence 479999999999999999999999999999998764321 1246678888888865 889888877654 46
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+||++ +.++.+||+|||+++.
T Consensus 80 ~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 80 TLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCccc
Confidence 789999999 7899999874 3468999999999999999999999999999999999999 5678899999999986
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
+....... .......++..|+|||++.+..++.++|||||||++|||++|..||..... .+.+........
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~~~~~~~~-- 226 (266)
T cd06651 156 LQTICMSG----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIFKIATQPT-- 226 (266)
T ss_pred cccccccC----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHHHHhcCCC--
Confidence 54321100 011234689999999999998899999999999999999999999976432 222222221111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.+.+...++..+.+++ .||..+|++||++++|+
T Consensus 227 -~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 227 -NPQLPSHISEHARDFL-GCIFVEARHRPSAEELL 259 (266)
T ss_pred -CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHh
Confidence 1122334678888988 68889999999988884
No 286
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.2e-37 Score=299.59 Aligned_cols=249 Identities=24% Similarity=0.333 Sum_probs=208.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.+.||.|++|.||+|.+..+++.|+||++..... ...+..|...+..+++ ++++.+..++......+++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES--PYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC--CCeeeEEEEEccCCeEEEEE
Confidence 479999999999999999999999999999998876643 3567788888888874 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ..+++..++.++.||+.||.|||+ .|++||||+|+||++ +.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 79 EYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred EecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCC
Confidence 999 79999999753 679999999999999999999999 999999999999999 578899999999998765432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|..||.........+....+..... ..+
T Consensus 155 ~~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~ 223 (264)
T cd06623 155 DQ-------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP----PSL 223 (264)
T ss_pred Cc-------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC----CCC
Confidence 21 1234688999999999998899999999999999999999999987643233444444432222 122
Q ss_pred hcC-ChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
... ++..+.+++..||..+|++||++.++++
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 344 7899999999999999999999988854
No 287
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.7e-38 Score=303.84 Aligned_cols=247 Identities=19% Similarity=0.329 Sum_probs=202.8
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
++|++.+.||.|+||.||+|.+..+++.||+|.+...... .++.+|+++++.+. |++++.+..++......+++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN--SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC--CCchhhhheeeecCCEEEEEE
Confidence 4789999999999999999999999999999987665332 35677888888877 489999998888889999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++......+++..+..++.||+.||.|||+ .||+|+||||+||+++ ..+.++|+|||++..+....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHHH
Confidence 999 689999998655789999999999999999999999 9999999999999994 67889999999997664322
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCC--CCHHHHHHHHhhccccccHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~~~ 239 (475)
. ....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+..+.......
T Consensus 156 ~---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (265)
T cd06605 156 A---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR--- 223 (265)
T ss_pred h---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC---
Confidence 1 125788999999999999999999999999999999999999976421 11222222222222111
Q ss_pred HHhcC-ChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 240 ALCRG-YPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 240 ~l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
+... ++.++.++|.+||..+|++||++.+++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 255 (265)
T cd06605 224 -LPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255 (265)
T ss_pred -CChhhcCHHHHHHHHHHcCCCchhCcCHHHHh
Confidence 1122 688999999999999999999988874
No 288
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.8e-37 Score=302.46 Aligned_cols=251 Identities=24% Similarity=0.404 Sum_probs=200.5
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC------------chHHHHHHHHHHHHhCCCCCcCeeEEeeEe
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------------HPQLQYEAKLYKILQGGSTGIPNLRWFGVE 75 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~------------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~ 75 (475)
+|.+.+.||.|+||.||+|.+..+++.||||.++.... .+.+..|+.++..+.+ ++++.+++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~ 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--LNIVQYLGFETT 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--CCcceEEEEecc
Confidence 58999999999999999999988999999997653211 1235678888887765 899999999999
Q ss_pred CCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 76 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 76 ~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
.+..++||||+ +++|.+++... ..+++..+..++.||+.||.|||+++++||||||+||++ +.++.++|+|||++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~ 155 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGIS 155 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccc
Confidence 99999999999 88999998754 579999999999999999999999999999999999999 47889999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCC--CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~--~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
+......... ......|+..|+|||.+.+.. ++.++||||||+++|||++|..||..... .+.+..+...
T Consensus 156 ~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~ 227 (272)
T cd06629 156 KKSDDIYDND-----QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---IAAMFKLGNK 227 (272)
T ss_pred cccccccccc-----ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---HHHHHHhhcc
Confidence 7654321111 123456899999999988755 78999999999999999999999965322 2222222211
Q ss_pred c-ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 K-VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 ~-~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. ...........++.++.+++.+||..+|++||++.+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 228 RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1 111122334567899999999999999999999888754
No 289
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.3e-38 Score=314.66 Aligned_cols=258 Identities=18% Similarity=0.247 Sum_probs=201.1
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeE----eC
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGV----EG 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~----~~ 76 (475)
++++|++.+.||.|+||.||+|.+..+++.||||.+.... ....+..|+.+++.+.| ++++.+..++. ..
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~ 80 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH--DNIIAIRDILRPPGADF 80 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC--CCccCHHHhccccCCCC
Confidence 5689999999999999999999999999999999876542 22356778899988875 88888766543 34
Q ss_pred CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 77 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
...++||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 81 ~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 81 KDVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARG 156 (334)
T ss_pred ceEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEeccccccee
Confidence 57899999998899998863 4569999999999999999999999999999999999999 4788999999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH------
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI------ 229 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i------ 229 (475)
........ ........|+..|+|||.+.+ ..++.++|||||||++|||++|..||.+.........+...
T Consensus 157 ~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 157 LSSSPTEH---KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE 233 (334)
T ss_pred ecccCcCC---CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence 64432211 011234578999999999866 45899999999999999999999999764322111111110
Q ss_pred -----------------hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 230 -----------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 230 -----------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
...........+...++.++.++|.+||+.+|++||++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 011111222334466789999999999999999999988764
No 290
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.2e-38 Score=307.07 Aligned_cols=240 Identities=19% Similarity=0.223 Sum_probs=186.9
Q ss_pred eeEeeeCceeEEEEEEccCCe-------EEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTNE-------EVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~-------~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+.||.|+||.||+|.+..++. .||+|++..... ...+..|..+++.+.| ++++.++.++..+...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h--~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH--KHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC--CChhheeeEEEeCCCcEEEE
Confidence 469999999999999865543 488888654332 2346678888877765 99999999998888999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC-----CCcEEEeecCCcccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-----ANQVYIIDFGLAKRY 157 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-----~~~vkL~DFGlA~~~ 157 (475)
||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++. ...++|+|||++...
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 999 88999999866667899999999999999999999999999999999999963221 124799999998754
Q ss_pred cccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCC-CCCCCCCCCCHHHHHHHHhhcccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGS-LPWQGLKAGTKKQKYEKISEKKVS 235 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~-~Pf~~~~~~~~~~~~~~i~~~~~~ 235 (475)
... ....++..|+|||++.+. .++.++|||||||++|||++|. .||...... .. .......
T Consensus 159 ~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~---~~-~~~~~~~-- 221 (258)
T cd05078 159 LPK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ---KK-LQFYEDR-- 221 (258)
T ss_pred CCc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH---HH-HHHHHcc--
Confidence 321 234688899999999874 4799999999999999999984 666543221 11 1111111
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
..+....+.++.+++.+||+.+|++||++++|++.|
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 222 ---HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ---ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 112234567899999999999999999999998765
No 291
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.8e-38 Score=305.21 Aligned_cols=249 Identities=20% Similarity=0.316 Sum_probs=195.6
Q ss_pred eeEeeeCceeEEEEEEccCC------eEEEEEEeccCC---CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTN------EEVAIKLENVKT---KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~------~~vAvKi~~~~~---~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+.||+|+||.||+|++.... +.||||.+.... ....+..|+.+++.+.| ++|+.+..++...+..+++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH--PNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC--CCeeeEeeeecCCCCeEEEE
Confidence 36899999999999976544 689999875543 23457788888888865 89999999988889999999
Q ss_pred EcC-CCCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC--CCCcEEEeecCCc
Q 011882 84 DLL-GPSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGLA 154 (475)
Q Consensus 84 e~~-g~sL~~ll~~~------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGlA 154 (475)
||+ +++|.+++... ...+++.+++.++.||+.||.|||+++|+|+||||+|||++.++ ....++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999 88999988642 13478999999999999999999999999999999999996322 2238999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
+........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+....
T Consensus 159 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~~~~~ 230 (269)
T cd05044 159 RDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHVTAGG 230 (269)
T ss_pred ccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHHhcCC
Confidence 865433211 11223356788999999999899999999999999999998 9999976432 22222222211
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
.. .....+|..+.+++.+||..+|++||++.+|++.|+
T Consensus 231 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 RL----QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cc----CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11 122457899999999999999999999999988876
No 292
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.9e-38 Score=308.37 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=200.9
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..|++.+.||+|+||.||+|.+..+++.||||++...... ..+..|+.++..+.| ++++.+..++...+..++||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--PYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC--CccHhhhcccccCCceEEEE
Confidence 4588889999999999999999889999999987644322 346778888887764 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++. ...+++..+..++.||+.||.|||++||+|+||+|+||+++ +++.++|+|||++..+.....
T Consensus 82 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 82 EYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCcch
Confidence 999 789998886 45789999999999999999999999999999999999994 678899999999986654321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|+..|+|||++.+..++.++|||||||++|||++|..||........ ...+..... ..+.
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~~~~~~~~----~~~~ 222 (277)
T cd06642 157 -------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---LFLIPKNSP----PTLE 222 (277)
T ss_pred -------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---HhhhhcCCC----CCCC
Confidence 11234688999999999998999999999999999999999999976433221 111111111 1223
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..++.++.+++.+||..+|++||++.+|+.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 456889999999999999999999999865
No 293
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.5e-37 Score=313.69 Aligned_cols=255 Identities=20% Similarity=0.225 Sum_probs=198.8
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC----
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG---- 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~---- 76 (475)
+.++|++.+.||+|+||.||+|.+..+++.||||.+.... ....+..|+.+++.++| ++++.+.++....
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDH--ENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCC--CCccchHHheecccccc
Confidence 5789999999999999999999999999999999875431 22356678888888865 8898887665433
Q ss_pred -CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 -DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 -~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
...|++|||++++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 81 FNDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLAR 156 (337)
T ss_pred cCcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCcccc
Confidence 35799999999999998874 4579999999999999999999999999999999999999 467899999999998
Q ss_pred cccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh---
Q 011882 156 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE--- 231 (475)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~--- 231 (475)
....... ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.........+.....
T Consensus 157 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 229 (337)
T cd07858 157 TTSEKGD-------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPS 229 (337)
T ss_pred ccCCCcc-------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 6644321 1134568899999998875 4589999999999999999999999976422111111111000
Q ss_pred --------------------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 --------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 --------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.............++.++.+++.+||..+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 230 EEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred hHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 00111122334567899999999999999999999887743
No 294
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.9e-37 Score=298.66 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=202.3
Q ss_pred eEEeeeEeeeCceeEEEEEEccCC----eEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~----~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
+++.+.||.|+||.||+|.+...+ ..||+|++..... ...+..|+.++..+.+ ++++.++.++......++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH--PNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC--CchheEEEEEcCCCeeEE
Confidence 467899999999999999988766 8999999876543 3467788899888844 899999999988899999
Q ss_pred EEEcC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+||++ +++|.+++...... +++..+..++.||+.||.|||+.||+|+||||+||++ +..+.++|+|||+++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceeccc
Confidence 99999 88999998754434 9999999999999999999999999999999999999 4677999999999987654
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
..... .....++..|++||.+.+..++.++|||||||++|+|++ |..||.... ....+..+.......
T Consensus 156 ~~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~---~~~~~~~~~~~~~~~-- 224 (258)
T smart00219 156 DDYYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS---NEEVLEYLKKGYRLP-- 224 (258)
T ss_pred ccccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHhcCCCCC--
Confidence 32211 112237789999999988889999999999999999998 889987632 233333333332221
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
....++.++.+++.+||..+|++||++.++++.|
T Consensus 225 --~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 --KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 2244789999999999999999999999987653
No 295
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-37 Score=303.72 Aligned_cols=247 Identities=21% Similarity=0.341 Sum_probs=200.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhC-CCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQG-GSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~-~~~~i~~l~~~~~~~~~~~lv 82 (475)
+.|++.+.||+|+||.||+|.+..+++.||||+++.... ..++..|+.+++.+.. .|++++.+..++..+...|+|
T Consensus 1 ~~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 1 SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred ChhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 358899999999999999999999999999998865432 2457788889888862 348999999888899999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+|+||+|+||+++ ..+.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 81 MEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCCCc
Confidence 9999 8899998863 4799999999999999999999999999999999999994 67899999999998765433
Q ss_pred cccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
. ......|+..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.... .....+..... +.
T Consensus 156 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---~~~~~~~~~~~----~~ 221 (277)
T cd06917 156 S-------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---RAMMLIPKSKP----PR 221 (277)
T ss_pred c-------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---hhhhccccCCC----CC
Confidence 1 1123478999999999875 44789999999999999999999999764321 11111111111 11
Q ss_pred Hhc-CChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 241 LCR-GYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 241 l~~-~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
+.. .++.++.+++..||..||++||++.+++.
T Consensus 222 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 222 LEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 222 37889999999999999999999888854
No 296
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.4e-37 Score=303.28 Aligned_cols=252 Identities=20% Similarity=0.235 Sum_probs=199.4
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
|++.++||.|++|.||+|.+..+|..||||++..... ...+..|+++++.+++ ++++.+..++..++..+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~--~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH--PNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC--CCccCHhheeccCCeEEEEEe
Confidence 7889999999999999999999999999998765432 2357789999888875 899999999999999999999
Q ss_pred cCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|++++|.+++.... ..+++..++.++.||+.||.|||+++++||||+|+||+++ .++.++|+|||++..+.....
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 79 FLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred ccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc-
Confidence 99889999887543 3689999999999999999999999999999999999994 678999999999976533211
Q ss_pred cccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH-------------
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI------------- 229 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i------------- 229 (475)
......++..|+|||++.+. .++.++|||||||++|+|++|..||...........+...
T Consensus 155 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 155 ------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred ------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 11223568899999988764 4789999999999999999999999764321111111100
Q ss_pred --------hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 230 --------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 230 --------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...............++.++.+++.+||+.+|.+||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 229 SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000011222334567889999999999999999999888753
No 297
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.1e-37 Score=307.01 Aligned_cols=245 Identities=22% Similarity=0.321 Sum_probs=199.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
...|++.++||+|+||.||+|.+..+++.||+|++...... ..+..|+++++.++| ++++.+.+++...+..+
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH--PNTIEYKGCYLREHTAW 91 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCC--CCEEEEEEEEEeCCeEE
Confidence 45699999999999999999999889999999987643321 346778888888865 99999999999999999
Q ss_pred EEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 81 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 81 lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+||||+.++|.+++......+++..+..++.||+.||.|||+.||+||||+|+||++ ++++.++|+|||++......
T Consensus 92 lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 92 LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred EEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCCC
Confidence 999999889988887666779999999999999999999999999999999999999 47789999999998754321
Q ss_pred ccccccccccCCCCccCcccccccccc---CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~---g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
....|+..|+|||++. ...++.++||||||+++|||++|..||.+... ......+........
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~ 234 (307)
T cd06607 169 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNDSPTL 234 (307)
T ss_pred -----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH---HHHHHHHhcCCCCCC
Confidence 2356888999999885 34578999999999999999999999976432 122222221111111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. ...++.++.+++.+||..+|++||++.+|+.
T Consensus 235 ~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 235 S---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred C---chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 1236789999999999999999999888854
No 298
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.8e-37 Score=298.43 Aligned_cols=246 Identities=22% Similarity=0.293 Sum_probs=201.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeE--eCCEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGV--EGDYNVL 81 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~--~~~~~~l 81 (475)
+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+..|+.+++.+.+ ++++.+..+.. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKH--PNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCC--CccceeeeeeecCCCCEEEE
Confidence 58999999999999999999999999999998865432 2346678888888876 88988877654 4467899
Q ss_pred EEEcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 82 VIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVH-----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH-----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
+|||+ +++|.+++... ...+++..++.++.||+.||.||| +.+|+|+||||+||+++ ..+.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccc
Confidence 99999 88999998754 457999999999999999999999 89999999999999994 67899999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
++..+..... ......|+..|++||++.+..++.++||||||+++|+|++|..||.... .......+...
T Consensus 156 ~~~~~~~~~~-------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~ 225 (265)
T cd08217 156 LAKILGHDSS-------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLASKIKEG 225 (265)
T ss_pred ccccccCCcc-------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHHHHhcC
Confidence 9987654321 0123478999999999999889999999999999999999999998643 22333333322
Q ss_pred cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.. ..+...++.++.+++.+||..+|++||++.+|++
T Consensus 226 ~~----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 226 KF----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CC----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 22 1233567899999999999999999999998864
No 299
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.9e-37 Score=299.02 Aligned_cols=245 Identities=25% Similarity=0.360 Sum_probs=201.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
+|+..+.||+|+||.||+|.+..+++.|+||.+.... ....+..|+.+++.+.| ++++.+.+++......+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH--PNIVQYLGTEREEDNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC--CCchheeeeEecCCeEE
Confidence 5888999999999999999998899999999876543 22357778888888765 89999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
++|||+ +++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||++ +..+.+||+|||++.....
T Consensus 79 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 79 IFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceeccc
Confidence 999999 78999998743 468999999999999999999999999999999999999 4678999999999986544
Q ss_pred cccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
.. ......|+..|++||.+.... ++.++|+|||||++|+|++|..||.... .......+.... ..
T Consensus 155 ~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~---~~~~~~~~~~~~---~~ 220 (258)
T cd06632 155 FS--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE---GVAAVFKIGRSK---EL 220 (258)
T ss_pred cc--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc---HHHHHHHHHhcc---cC
Confidence 32 123457899999999998776 8999999999999999999999997643 222222222211 11
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..+...++.++.+++.+||..+|++||++.+++.
T Consensus 221 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 2234567899999999999999999999888753
No 300
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-37 Score=302.84 Aligned_cols=240 Identities=17% Similarity=0.191 Sum_probs=184.2
Q ss_pred eeEeeeCceeEEEEEEcc------------CCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 13 RKIGSGSFGEIYLGTNIQ------------TNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~------------~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
+.||+|+||.||+|.... ....|++|++...... ..+..|..++..+.| ++++.+++++.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h--p~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH--KHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCC
Confidence 468999999999998532 2236899987554322 245666777777765 999999999998889
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC----CCcEEEeecCC
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR----ANQVYIIDFGL 153 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~----~~~vkL~DFGl 153 (475)
.+++|||+ +++|..++......+++..++.|+.||+.||.|||++||+||||||+||||..+.. ...++|+|||+
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999 77888887755567999999999999999999999999999999999999963211 12389999999
Q ss_pred cccccccccccccccccCCCCccCcccccccccc-CCCCCCchhHHHHHHHHHHHH-cCCCCCCCCCCCCHHHHHHHHhh
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-g~~~s~ksDIwSlG~iL~ell-tG~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
+..+... ....++..|+|||.+. +..++.++|||||||+||||+ .|..||........ .....
T Consensus 159 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----~~~~~ 223 (262)
T cd05077 159 PITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK----ERFYE 223 (262)
T ss_pred CccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH----HHHHh
Confidence 8754321 2346788999999887 466899999999999999998 58999876432211 11111
Q ss_pred ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 232 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 232 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
.... +....+.++.+|+.+||+.||++||++.+|++.|
T Consensus 224 ~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQCM-----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cCcc-----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1111 1223467899999999999999999999997765
No 301
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.6e-37 Score=313.17 Aligned_cols=263 Identities=18% Similarity=0.244 Sum_probs=204.1
Q ss_pred CCCccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC----CCchHHHHHHHHHHHH-hCCCCCcCeeEEeeEe
Q 011882 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKIL-QGGSTGIPNLRWFGVE 75 (475)
Q Consensus 1 m~~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~----~~~~~~~~E~~il~~l-~~~~~~i~~l~~~~~~ 75 (475)
+++.+.++|++.+.||+|+||.||+|.+..+++.||||.+... .....+..|+.++..+ +| ++++.+++++..
T Consensus 1 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~ni~~~~~~~~~ 78 (337)
T cd07852 1 IDKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--PNIVKLLNVIKA 78 (337)
T ss_pred CCchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--CCccceeeeecc
Confidence 4678899999999999999999999999889999999976432 1223466788888888 54 899999887654
Q ss_pred --CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 76 --GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 76 --~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
....|+||||++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~ 153 (337)
T cd07852 79 ENDKDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGL 153 (337)
T ss_pred CCCceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccc
Confidence 346899999998899988863 378999999999999999999999999999999999999 5788999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh--
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS-- 230 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~-- 230 (475)
++.+....... .......+.||..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.........+....
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07852 154 ARSLSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGP 231 (337)
T ss_pred hhccccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 98765432211 00122345789999999988654 57899999999999999999999997643322111111110
Q ss_pred ---------------------hccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 231 ---------------------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 231 ---------------------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..........+...++.++.+++..||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 232 PSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred CCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 001111223344557899999999999999999999888754
No 302
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=315.34 Aligned_cols=249 Identities=22% Similarity=0.261 Sum_probs=209.8
Q ss_pred CCccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 2 ~~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
.|+-.+.|+.-++||+||||+||-+.-..||+.||+|.+..+. ...-...|..++..+.. +.|+.+...++..
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s--~FiVslaYAfeTk 257 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS--PFIVSLAYAFETK 257 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc--CcEEEEeeeecCC
Confidence 3556788999999999999999999999999999999765432 22336778889988877 7899998888999
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
+..|+||.+| ||+|.-.|...+ ..|++..++.++.+|+.||++||..+||.|||||+|||| |+.|+|.|+|+|||
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLA 334 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLA 334 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceE
Confidence 9999999999 999987776544 359999999999999999999999999999999999999 78999999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
..+...... ...+||..|||||++.+..|+...|+|||||+||||+.|+.||...+.....+.+.+. .
T Consensus 335 vei~~g~~~--------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr----~ 402 (591)
T KOG0986|consen 335 VEIPEGKPI--------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR----T 402 (591)
T ss_pred EecCCCCcc--------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH----H
Confidence 988765432 2448999999999999999999999999999999999999999875544333333222 2
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
....+++...++++.++|++..|..||.+|...
T Consensus 403 ~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 403 LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 233445667889999999999999999999764
No 303
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-37 Score=305.01 Aligned_cols=239 Identities=17% Similarity=0.227 Sum_probs=184.3
Q ss_pred eEeeeCceeEEEEEEccC------------------------CeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcC
Q 011882 14 KIGSGSFGEIYLGTNIQT------------------------NEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIP 67 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~------------------------~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~ 67 (475)
+||+|+||.||+|....+ ...||+|++..... ...+..|+.++..+.| +|++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h--~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH--IHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC--CCee
Confidence 699999999999985322 13588998754322 1245567777776665 9999
Q ss_pred eeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC----CC
Q 011882 68 NLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG----RR 142 (475)
Q Consensus 68 ~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~----~~ 142 (475)
.+++++......++||||+ +++|..++......+++..++.|+.||+.||+|||++||+||||||+|||++.. ..
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999 889988887656679999999999999999999999999999999999999632 11
Q ss_pred CCcEEEeecCCcccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHH-cCCCCCCCCCCC
Q 011882 143 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAG 220 (475)
Q Consensus 143 ~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~ell-tG~~Pf~~~~~~ 220 (475)
...+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||......
T Consensus 160 ~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 160 SPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 235899999998654321 12357888999998876 56899999999999999985 699999765432
Q ss_pred CHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011882 221 TKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 274 (475)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 274 (475)
.....+ ..... +....+.++.+++.+||+.+|++||++.+|++.|
T Consensus 229 ~~~~~~----~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 229 EKERFY----EKKHR-----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHH----HhccC-----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 211111 11111 1123457899999999999999999999997765
No 304
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.6e-37 Score=311.31 Aligned_cols=265 Identities=20% Similarity=0.266 Sum_probs=204.7
Q ss_pred CCCccCCceEE-eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----------------HHHHHHHHHHHHhCCC
Q 011882 1 MEPRVGNKFRL-GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----------------QLQYEAKLYKILQGGS 63 (475)
Q Consensus 1 m~~~i~~~y~l-~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----------------~~~~E~~il~~l~~~~ 63 (475)
|..-+.++|.. .+.||.|+||.||+|.+..+++.||||++....... .+..|++++..+.|
T Consensus 2 ~~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-- 79 (335)
T PTZ00024 2 MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH-- 79 (335)
T ss_pred CccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC--
Confidence 67778899975 577999999999999999999999999876443221 46678888888875
Q ss_pred CCcCeeEEeeEeCCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC
Q 011882 64 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 143 (475)
Q Consensus 64 ~~i~~l~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 143 (475)
++++.+..++...++.+++|||+.++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||++ +..
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~ 155 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSK 155 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCC
Confidence 899999999999999999999998899999873 4569999999999999999999999999999999999999 477
Q ss_pred CcEEEeecCCcccccccccccc-------cccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCC
Q 011882 144 NQVYIIDFGLAKRYRDTATHQH-------IPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 215 (475)
Q Consensus 144 ~~vkL~DFGlA~~~~~~~~~~~-------~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~ 215 (475)
+.++|+|||++..+........ ..........++..|+|||.+.+.. ++.++|||||||++|||++|..||.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 156 GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 8999999999987652211000 0000112335788999999998754 6899999999999999999999998
Q ss_pred CCCCCCHHHHHHHHhhcc--------------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 216 GLKAGTKKQKYEKISEKK--------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 216 ~~~~~~~~~~~~~i~~~~--------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
+.........+....... ...........++.++.+++..||..+|++||++++++
T Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 236 GENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 754322111111111000 01112223345678999999999999999999988875
No 305
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.8e-37 Score=306.89 Aligned_cols=269 Identities=19% Similarity=0.310 Sum_probs=206.2
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
-.++|++.+.||+|+||.||+|.+..+++.||||.++..... ..+..|..++..+. .|++++.+++++......|+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-DCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-CCCchHhhheeeecCCeEEE
Confidence 357899999999999999999999888999999998754332 23445665554443 35999999999999999999
Q ss_pred EEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+|||++++|.+++......+++..+..++.||+.||.|||+ .||+||||||+||++ ++++.+||+|||++..+...
T Consensus 92 v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhccCC
Confidence 99999889999887666789999999999999999999997 699999999999999 47789999999999766443
Q ss_pred ccccccccccCCCCccCccccccccccCCC----CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~----~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
... ....++..|+|||++.+.. ++.++|||||||++|+|++|..||..... ..+.+..+.......
T Consensus 169 ~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~ 238 (296)
T cd06618 169 KAK--------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--EFEVLTKILQEEPPS 238 (296)
T ss_pred Ccc--------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--HHHHHHHHhcCCCCC
Confidence 221 1235788999999997654 78999999999999999999999965321 122233332222111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccc
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDW 291 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw 291 (475)
.+ ....++.++.+++.+||..||++||++.++++. .++.......+.+.+|
T Consensus 239 -~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~--~~~~~~~~~~~~~~~~ 289 (296)
T cd06618 239 -LP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH--PFIRRYETAEVDVAGW 289 (296)
T ss_pred -CC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC--hhhhccchhHHHHHHH
Confidence 11 112468899999999999999999999888543 3333333333333444
No 306
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.8e-37 Score=301.44 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=197.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEe--CCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVE--GDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~--~~~~~l 81 (475)
++|+..++||.|++|.||+|.+..+++.||+|.+..... ...+.+|++++..+.| ++|+.++.++.. ....++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS--PYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCC--CCeeeeeeEEEccCCCeEEE
Confidence 579999999999999999999999999999998875433 2457788888888765 899998876653 447899
Q ss_pred EEEcC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 82 VIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 82 vme~~-g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
||||+ +++|.+++.. ....+++..+..|+.||+.||.|||+.||+|+||+|+||++ +..+.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeeccccccc
Confidence 99999 8899988753 23458999999999999999999999999999999999999 46778999999998765
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCC--CCHHHHHHHHhhcccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVS 235 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~ 235 (475)
..... ....++..|++||.+.+..++.++|||||||++|+|++|..||..... ....+....+......
T Consensus 156 ~~~~~---------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd06621 156 VNSLA---------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP 226 (287)
T ss_pred ccccc---------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch
Confidence 43221 234678899999999998999999999999999999999999986532 1222222222221111
Q ss_pred ccHHHHh--cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 236 TSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 236 ~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
....... ..+++++.+++.+||..+|.+||++.+|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1000000 134678999999999999999999887743
No 307
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7e-37 Score=299.95 Aligned_cols=249 Identities=22% Similarity=0.283 Sum_probs=198.8
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhC-CCCCcCeeEEeeEeCCE-----
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQG-GSTGIPNLRWFGVEGDY----- 78 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~-~~~~i~~l~~~~~~~~~----- 78 (475)
|++.+.||+|+||.||+|++..+++.||||.+...... ..+..|..+++.+.. .|++++.+..++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 78999999999999999999888999999998754332 245568778777753 46999999988887776
Q ss_pred EEEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.+++||+++++|.+++.... ..+++..++.++.||+.||.|||+.+|+|+||||+||+++ .++.+||+|||++..+
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcceec
Confidence 89999999889999887543 3599999999999999999999999999999999999994 6689999999999876
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----- 232 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~----- 232 (475)
..... .....++..|+|||++.+..++.++|||||||++|||++|..||.+.... +.+.++...
T Consensus 158 ~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 226 (287)
T cd07838 158 SFEMA--------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA---DQLDKIFDVIGLPS 226 (287)
T ss_pred cCCcc--------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH---HHHHHHHHHcCCCC
Confidence 44321 12235788999999999999999999999999999999999999874432 222222110
Q ss_pred -----------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 -----------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 -----------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
............++.++.+++.+||..||++||++.+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 011111222334568889999999999999999988875
No 308
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-38 Score=316.57 Aligned_cols=255 Identities=23% Similarity=0.336 Sum_probs=213.0
Q ss_pred EEeeeEeeeCceeEEEEEEccC--C--eEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 10 RLGRKIGSGSFGEIYLGTNIQT--N--EEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 10 ~l~~~LG~G~fG~Vy~a~~~~~--~--~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.+.++||+|.||.||.|..... | -.||||..+.+.. .+.+..|+-+++.+.| +||+++++++.+. ..|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH--phIikLIGv~~e~-P~Wiv 468 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH--PHIIKLIGVCVEQ-PMWIV 468 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC--cchhheeeeeecc-ceeEE
Confidence 3457899999999999986532 2 3689998776543 3458889999998887 9999999998766 46999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||++ -|-|..+++..+..++..++..++.||+.||.|||++.+|||||-..|||++ ...+|||+|||+++.+.+..
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhccccc
Confidence 9999 8899999998888899999999999999999999999999999999999995 77899999999999887755
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
. |.. ....-...|||||.+.-..++.++|||-|||++||++. |..||++.+..+....+++... ..
T Consensus 546 y-----Yka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR-------lP 612 (974)
T KOG4257|consen 546 Y-----YKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER-------LP 612 (974)
T ss_pred h-----hhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-------CC
Confidence 3 221 12233567999999999999999999999999999987 9999999877654443333222 22
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGF 283 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~ 283 (475)
++.+||+.+..|+.+||+++|.+||++.+|...|.++++....
T Consensus 613 ~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~ 655 (974)
T KOG4257|consen 613 CPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI 655 (974)
T ss_pred CCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence 4478999999999999999999999999999999999985543
No 309
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.2e-37 Score=297.45 Aligned_cols=247 Identities=22% Similarity=0.302 Sum_probs=202.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||.|+||.||+|.+..++..||+|.+... .....+..|+.+++.+++ ++++.+.+.+......++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH--PNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC--CChhhhhheeccCCeEEEEE
Confidence 589999999999999999999999999999987654 233457789998888875 89999998888999999999
Q ss_pred EcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ ++...+||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS--KNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc--CCCCeEEecccccchhccCCc
Confidence 999 889999887533 3589999999999999999999999999999999999995 333567999999998765432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
.. .....|+..|+|||++.+..++.++|||||||++|||++|..||.... ..+.+..+...... .+
T Consensus 157 ~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~----~~ 222 (257)
T cd08225 157 EL-------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN---LHQLVLKICQGYFA----PI 222 (257)
T ss_pred cc-------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHhcccCC----CC
Confidence 21 123468999999999998889999999999999999999999997532 22333333222221 22
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.++.+++.+||..+|++||++.+|++
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 3457889999999999999999999888853
No 310
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2e-37 Score=306.76 Aligned_cols=258 Identities=22% Similarity=0.271 Sum_probs=201.1
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC--
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD-- 77 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~-- 77 (475)
+..++|++.+.||+|+||.||+|.+..+++.||||+++.... ...+..|..+++.++| ++++.++.++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h--~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNH--RNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCC--CCeeeeeheecCcchh
Confidence 345789999999999999999999999999999999865432 2346678888888865 89999877766544
Q ss_pred --------EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 78 --------YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 78 --------~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
..+++|||++++|.+++......+++..++.|+.||+.||.|||+.||+||||||+||++ ++.+.+||+
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~ 158 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLA 158 (302)
T ss_pred hhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeC
Confidence 789999999888888887555579999999999999999999999999999999999999 577899999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~ 228 (475)
|||++..+...... ......++..|++||++.+. .++.++|||||||++|||++|+.||...........+..
T Consensus 159 dfg~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 159 DFGLARLYNSEESR------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred cccccccccCCccc------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 99999876543220 11223568889999988754 468999999999999999999999976433222222222
Q ss_pred Hhhcccc----------------------ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 229 ISEKKVS----------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 229 i~~~~~~----------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
....... ......+..+|..+.+++..||..+|.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2111100 0111223457899999999999999999999988753
No 311
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=347.91 Aligned_cols=266 Identities=23% Similarity=0.321 Sum_probs=216.5
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|+|++.||.|+||.|.+++++.+++.||+|+++.. .....|..|..++..-.. .-|+.++..+.++.+.|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns--~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS--EWIVQLHYAFQDERYLY 151 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc--HHHHHHHHHhcCccceE
Confidence 46899999999999999999999999999999998762 233457778888775543 77888988999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+||||+ ||+|-.++.... +++++.+..++..|+.||.-||+.|+|||||||+|||| |..|+|||+|||.|-.+..
T Consensus 152 lVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred EEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCC
Confidence 999999 999999998766 89999999999999999999999999999999999999 6899999999999988875
Q ss_pred cccccccccccCCCCccCcccccccccc----C-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHL----G-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~----g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
+.... ....+|||.|.|||++. + +.|++.+|+||+||++|||+.|..||.. ....+.|.+|...+-
T Consensus 228 dG~V~------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa---dslveTY~KIm~hk~ 298 (1317)
T KOG0612|consen 228 DGTVR------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA---DSLVETYGKIMNHKE 298 (1317)
T ss_pred CCcEE------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH---HHHHHHHHHHhchhh
Confidence 54322 34569999999999986 3 4689999999999999999999999976 456777888877644
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 295 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 295 (475)
.-.++.. ..++.+.++||...+. +|+.|..-.-+-++-.+ +|..-.+|+..+
T Consensus 299 ~l~FP~~-~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H-------pFF~g~~W~~iR 350 (1317)
T KOG0612|consen 299 SLSFPDE-TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH-------PFFEGIDWDNIR 350 (1317)
T ss_pred hcCCCcc-cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC-------ccccCCChhhhh
Confidence 3333321 2378999999999875 68888772222222222 344567896543
No 312
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.7e-37 Score=299.80 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=196.1
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
+.....||+|+||.||+|.+..++..||+|.+..... ...+..|+.+++.++| ++++.+.+++..++..+++|||+
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH--RNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC--CCeeeeeeeeccCCEEEEEEecC
Confidence 4445689999999999999988999999998765433 2357788898888865 89999999999999999999999
Q ss_pred -CCCHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 87 -GPSLEDLFNFCSRKL--SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 87 -g~sL~~ll~~~~~~l--s~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
+++|.+++......+ ++..++.++.||+.||.|||++||+||||||+||+++ ...+.++|+|||++..+.....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~- 164 (268)
T cd06624 88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINP- 164 (268)
T ss_pred CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCC-
Confidence 889999987544455 8889999999999999999999999999999999995 3357899999999976543221
Q ss_pred cccccccCCCCccCccccccccccCCC--CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~--~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
......|+..|+|||++.+.. ++.++||||||+++|+|++|..||....... ......... .....+
T Consensus 165 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~~~---~~~~~~ 233 (268)
T cd06624 165 ------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVGMF---KIHPEI 233 (268)
T ss_pred ------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhhhh---ccCCCC
Confidence 112346899999999987654 7899999999999999999999997643211 111111100 111123
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...+++++.+++.+||..+|++||++.+|++
T Consensus 234 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 234 PESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 3567889999999999999999999988753
No 313
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.8e-37 Score=300.37 Aligned_cols=247 Identities=24% Similarity=0.368 Sum_probs=197.1
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||.|+||.||+|.+..+++.||||++...... ..+..|..++.. ...|++++.++.++...+..|++|||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI-QGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh-cCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 6799999999999999899999999987643221 123334333332 334599999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++... ..+++..+..++.||+.||.|||+.+|+||||+|+||++ +..+.++|+|||+++....
T Consensus 81 ~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 81 GGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccc-------
Confidence 88999999743 468999999999999999999999999999999999999 4678899999999875432
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
.....|+..|++||.+.+..++.++||||||+++|||++|..||..... .+.+..+....... .......++
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 221 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAVFDNILSRRINW-PEEVKEFCS 221 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcccCC-CCcccccCC
Confidence 1234688999999999998899999999999999999999999976432 33333333222211 112234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
.++.+++.+||..+|++||++..+.++|.+.+.
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~ 254 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKSHPFF 254 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence 999999999999999999998888887777655
No 314
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.5e-37 Score=301.03 Aligned_cols=245 Identities=22% Similarity=0.342 Sum_probs=201.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+-|++.++||.|+||.||+|.+..+++.||||+...... ...+..|..++..+.| ++++.++.++..++..++||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--PYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC--CCEeEEEEEEEeCCeEEEEE
Confidence 348889999999999999999988999999998764432 2346678888887765 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++. ...+++..+..++.|++.||.|||++||+|+||||+||++ +.++.++|+|||++..+.....
T Consensus 82 e~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 82 EYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EeCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccchh
Confidence 999 779998886 3568999999999999999999999999999999999999 4678899999999976543221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+..... +.+.
T Consensus 157 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~ 222 (277)
T cd06641 157 -------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP---MKVLFLIPKNNP----PTLE 222 (277)
T ss_pred -------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch---HHHHHHHhcCCC----CCCC
Confidence 11234688999999999988899999999999999999999999976432 222222222111 1233
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..++.++.+++.+||..+|++||++.++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 223 GNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 457899999999999999999999999876
No 315
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.8e-37 Score=301.42 Aligned_cols=240 Identities=22% Similarity=0.262 Sum_probs=189.4
Q ss_pred eEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhC-CCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQG-GSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~-~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
.||+|+||.||+|.+..+++.||||++...... .....|..+++.+.. .|++++.+.+++...+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999899999999987653211 123445555555542 4588988888888899999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
|++|.+++.. ...+++..++.|+.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~----- 151 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK----- 151 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccC-----
Confidence 8899988863 4579999999999999999999999999999999999999 467889999999997654321
Q ss_pred ccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 167 PYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
.....|+..|+|||++.+. .++.++|||||||++|||++|..||.+............+.... ..+...+
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 222 (278)
T cd05606 152 ----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSF 222 (278)
T ss_pred ----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC-----CCCCCcC
Confidence 1245789999999999754 68999999999999999999999998753322222221111111 1123456
Q ss_pred hHHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011882 246 PTEFASYFHYCRSLRFDDKP-----DYAYLK 271 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RP-----t~~~l~ 271 (475)
+.++.+++.+||..+|.+|| ++.+++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 253 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 253 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHH
Confidence 89999999999999999999 777764
No 316
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.1e-37 Score=301.65 Aligned_cols=242 Identities=25% Similarity=0.303 Sum_probs=200.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+++++.+.| ++++.++.++......++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH--PFLVNLWYSFQDEENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC--CChHHHHHhhcCCCeEEEE
Confidence 5899999999999999999998899999999886532 22457778888888765 8999998888889999999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ |++|.+++... ..+++..+..|+.||+.||.|||++||+|+||||+||++ ++++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 79 VDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred EeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCc
Confidence 9999 88999998754 579999999999999999999999999999999999999 577899999999998664432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 241 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 241 (475)
. .....|+..|+|||.+.+..++.++||||||+++|+|++|..||.........+....... .....
T Consensus 155 ~--------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~ 221 (258)
T cd05578 155 L--------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-----ADVLY 221 (258)
T ss_pred c--------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-----ccccC
Confidence 1 1235688999999999988899999999999999999999999987544322222222111 11223
Q ss_pred hcCChHHHHHHHHHHhcCCCCCCCCHH
Q 011882 242 CRGYPTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 242 ~~~~p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
...+|.++.++|.+||..||.+||++.
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 222 PATWSTEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred cccCcHHHHHHHHHHccCChhHcCCcc
Confidence 356789999999999999999999984
No 317
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.6e-37 Score=311.57 Aligned_cols=257 Identities=19% Similarity=0.223 Sum_probs=197.0
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEe-------
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVE------- 75 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~------- 75 (475)
++++|++.+.||.|+||.||+|.+..+++.||||.+...... ..+..|+++++.+++ ++++.++.+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h--~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH--DNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCC--CcchhhHhhhccccccccc
Confidence 468999999999999999999999999999999987654432 357789999988865 888887654332
Q ss_pred -------CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEE
Q 011882 76 -------GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI 148 (475)
Q Consensus 76 -------~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL 148 (475)
....|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++ ..++.+||
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceEEE
Confidence 24679999999889988886 34699999999999999999999999999999999999995 34567999
Q ss_pred eecCCcccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011882 149 IDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 227 (475)
Q Consensus 149 ~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~ 227 (475)
+|||+++.+....... .......|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+...........
T Consensus 157 ~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 157 GDFGLARIVDPHYSHK----GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred CCcccceecCCccccc----cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999998654322111 01122367889999998764 457899999999999999999999997643221111111
Q ss_pred HH----------------------hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 228 KI----------------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 228 ~i----------------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.. ...........+...++.++.+++.+||..||++||++.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 00 001111222333456788999999999999999999988874
No 318
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-37 Score=307.84 Aligned_cols=247 Identities=18% Similarity=0.309 Sum_probs=198.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+.|.....||+|+||.||++.+..++..||||.+..... ...+..|..+++.++| ++++.+...+..+++.++|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h--~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH--ENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC--CcHHHHHHheecCCeEEEEEe
Confidence 456667889999999999999988999999998754332 2346778888887765 899999888888999999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|+ +++|.+++. ...+++.+++.++.||+.||.|||++||+||||||+||++ ++++.++|+|||++........
T Consensus 100 ~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~~~~- 173 (292)
T cd06658 100 FLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSKEVP- 173 (292)
T ss_pred CCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhcccccc-
Confidence 99 789988875 3468999999999999999999999999999999999999 4678999999999976543221
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
......|+..|+|||.+.+..++.++|||||||++|||++|..||.+... ...+..+... ..... ....
T Consensus 174 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~-~~~~~-~~~~ 242 (292)
T cd06658 174 ------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP---LQAMRRIRDN-LPPRV-KDSH 242 (292)
T ss_pred ------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhc-CCCcc-cccc
Confidence 12345789999999999988899999999999999999999999976432 2222222111 11111 1123
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.++..+.+++..||..||.+||++.++++
T Consensus 243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 243 KVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 46789999999999999999999888754
No 319
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6.4e-37 Score=298.89 Aligned_cols=242 Identities=19% Similarity=0.258 Sum_probs=192.2
Q ss_pred CCceEEeeeE--eeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKI--GSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~L--G~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.++|++.+.+ |+|+||.||++.++.+++.+|+|++....... .|..+...+. .|++++.++..+...+..|+||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~e~~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~ 88 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---IEPMVHQLMK-DNPNFIKLYYSVTTLKGHVLIM 88 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---hhHHHHHHhh-cCCCEEEEEEEEecCCeeEEEE
Confidence 3567787777 99999999999999999999999976542221 2333333333 4599999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCC-cEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGlA~~~~~~~ 161 (475)
||+ +++|.+++... ..+++.+++.++.||+.||.|||+.||+||||||+||++. ..+ .++|+|||+++.....
T Consensus 89 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~~~~~~- 163 (267)
T PHA03390 89 DYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCKIIGTP- 163 (267)
T ss_pred EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccceecCCC-
Confidence 999 89999999754 4799999999999999999999999999999999999995 445 8999999999765432
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHHHHHhhccccccHHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~ 240 (475)
....|+..|+|||++.+..++.++|||||||++|||++|..||........ ...+...... ...
T Consensus 164 ----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~ 228 (267)
T PHA03390 164 ----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK-----KLP 228 (267)
T ss_pred ----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc-----cCC
Confidence 234689999999999998999999999999999999999999985432211 1111111111 112
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCC-HHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPD-YAYLK 271 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt-~~~l~ 271 (475)
..+.+++.+.++|.+||+.+|.+||+ +++++
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 229 FIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred cccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 23467899999999999999999995 57664
No 320
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.4e-37 Score=305.89 Aligned_cols=244 Identities=23% Similarity=0.330 Sum_probs=199.1
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
..|+..+.||+|+||.||+|.+..+++.||||.+...... ..+..|+.+++.++| ++++.+..++...+..++
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l 102 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH--PNSIEYKGCYLREHTAWL 102 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC--CCEEEEEEEEeeCCeEEE
Confidence 4588999999999999999999999999999987643221 246678888887765 899999999999999999
Q ss_pred EEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 82 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 82 vme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||||+.++|.+++......+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCCc-
Confidence 99999889988887666779999999999999999999999999999999999999 46789999999998754321
Q ss_pred cccccccccCCCCccCcccccccccc---CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~---g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
....|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+........
T Consensus 179 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~- 244 (317)
T cd06635 179 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNESPTL- 244 (317)
T ss_pred ----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHhccCCCC-
Confidence 2346889999999974 34688999999999999999999999976422 222222222211111
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
....+++.+.+++.+||..+|.+||++.+|++
T Consensus 245 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 245 --QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred --CCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 12346788999999999999999999988854
No 321
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.7e-37 Score=301.34 Aligned_cols=249 Identities=22% Similarity=0.254 Sum_probs=202.2
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
|++.+.||.|++|.||+|.+..+++.|++|.+...... ..+..|..+++.+.+ ++++.++.+...+...+++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH--PNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC--CCcchHHHhhccCCCEEEEEe
Confidence 67889999999999999999889999999987654332 457778888888874 899999988888899999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 85 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 85 ~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
|++++|.+++......+++..++.++.||+.||.|||+++|+|+||||+||++ +.++.++|+|||.+..+.....
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~-- 153 (283)
T cd05118 79 FMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVR-- 153 (283)
T ss_pred ccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCcc--
Confidence 99889999887666689999999999999999999999999999999999999 4678999999999987654321
Q ss_pred ccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----------
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----------- 232 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 232 (475)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.||...... ..+..+...
T Consensus 154 -----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 225 (283)
T cd05118 154 -----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI---DQLFKIFRTLGTPDPEVWPK 225 (283)
T ss_pred -----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCchHhccc
Confidence 11234678899999999877 6899999999999999999999999764321 111111110
Q ss_pred --------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 233 --------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 233 --------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
........+...++.++.++|.+||..||.+||++.+|+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 226 FTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred chhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0011122334457889999999999999999999988753
No 322
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.3e-36 Score=306.18 Aligned_cols=256 Identities=19% Similarity=0.251 Sum_probs=196.3
Q ss_pred ceEEeeeEeeeCceeEEEEEEccC--CeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEe----CC
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQT--NEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVE----GD 77 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~--~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~----~~ 77 (475)
+|++.+.||+|+||.||+|.+..+ +..||||.+..... ...+..|+.+++.+.+ |++++.+..++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG-HKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcC-CCChheeeeeeeeccccCC
Confidence 589999999999999999999887 88999998764321 2356778888888754 3889988776432 25
Q ss_pred EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 78 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 78 ~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
..+++|++++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 80 ~~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceec
Confidence 6789999999999998863 4579999999999999999999999999999999999999 46789999999999876
Q ss_pred cccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH---------
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE--------- 227 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~--------- 227 (475)
....... ........||..|+|||++.+ ..++.++|||||||++|+|++|..||...........+.
T Consensus 156 ~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 156 SENPGEN---AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred ccccccc---cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 5432211 011234578999999998876 458999999999999999999999997643211111100
Q ss_pred ---HHhh-----------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 228 ---KISE-----------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 228 ---~i~~-----------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.+.. .........+...++.++.+++.+||..||.+||++.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0000 0011122333445678999999999999999999988763
No 323
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.2e-37 Score=305.77 Aligned_cols=247 Identities=17% Similarity=0.292 Sum_probs=200.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
..|+...+||+|+||.||+|.+..+++.||||++..... ...+..|+.++..+.| ++++.+..++..++..+++||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH--QNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC--CchhhhhhheeeCCeEEEEEe
Confidence 446667789999999999999988999999999765432 2456678877777764 899999998889999999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|+ +++|..++. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+.....
T Consensus 99 ~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~~- 172 (297)
T cd06659 99 FLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP- 172 (297)
T ss_pred cCCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhcccccc-
Confidence 99 789998875 3568999999999999999999999999999999999999 5778999999999976543221
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
......|+..|+|||++.+..++.++|||||||++|||++|..||.... ..+.+..+...... ......
T Consensus 173 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~---~~~~~~~~~~~~~~--~~~~~~ 241 (297)
T cd06659 173 ------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS---PVQAMKRLRDSPPP--KLKNAH 241 (297)
T ss_pred ------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhccCCC--CccccC
Confidence 1134578999999999999899999999999999999999999997533 22333333222111 111234
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.++.++.+++.+||..+|++||++.+|++
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 57889999999999999999999888855
No 324
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-38 Score=297.14 Aligned_cols=260 Identities=21% Similarity=0.276 Sum_probs=212.5
Q ss_pred eEE-eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 9 FRL-GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 9 y~l-~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
|++ .+.||+|+|+.|--+..+.++.+||||++.+...+ .++.+|++++..++++ +||+.+..|++++..+|||||-
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh-~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGH-KNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCC-ccHHHHHHHhcccceEEEEEec
Confidence 444 36899999999999999999999999998876554 4588999999999885 9999999999999999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
| ||+|...|.+ ...|++.++..+..+|+.||.|||.+||.||||||+|||....+.-.-||||||.|+.-+.......
T Consensus 158 m~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s 236 (463)
T KOG0607|consen 158 MRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS 236 (463)
T ss_pred ccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence 9 8898888874 4569999999999999999999999999999999999999755555679999999986544332222
Q ss_pred ccccccCCCCccCcccccccccc---CC--CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCC------------HHHHHH
Q 011882 165 HIPYRENKNLTGTARYASMNTHL---GI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------------KKQKYE 227 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~---g~--~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~------------~~~~~~ 227 (475)
.+......+.+|+..|||||+.. +. .|+.+.|+||||||||-||.|..||.|.-..+ ....++
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 316 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence 22222345668999999999764 32 48999999999999999999999998753221 345567
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.|++.++..+-. -+..++.+.++++..++..|+.+|.++..++
T Consensus 317 sIQEGkYeFPdk-dWahIS~eakdlisnLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 317 SIQEGKYEFPDK-DWAHISSEAKDLISNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred HHhccCCcCChh-hhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence 788877755433 3467889999999999999999998876653
No 325
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.1e-36 Score=298.44 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=199.6
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DYNVLV 82 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~~~lv 82 (475)
|++.++||.|+||.||+|.+..+++.||||.+.... ....+..|+.+++.+.+ ++++.+..+.... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH--PNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC--CCeeeheeeEecCCCCcEEEE
Confidence 789999999999999999999899999999987653 22346778889988875 8999998888877 899999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|||++++|.+++......+++..++.++.||+.||+|||++|++|+||||+|||+ ++++.+||+|||++........
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 79 FEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred eccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCCc
Confidence 9999889999987554579999999999999999999999999999999999999 4788999999999987655432
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh----------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---------- 231 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~---------- 231 (475)
. ......++..|+|||.+.+. .++.++|||||||++|||++|..||...........+.....
T Consensus 156 ~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 156 A------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred c------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 1 11233568889999988764 578999999999999999999999976443211111111100
Q ss_pred ------------ccccccHHHHhcC-ChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 ------------KKVSTSIEALCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 ------------~~~~~~~~~l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
......+...... ++.++.+++.+||..+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000111122233 3889999999999999999999888754
No 326
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.4e-37 Score=291.80 Aligned_cols=247 Identities=25% Similarity=0.410 Sum_probs=203.6
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC--CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~--~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
+|.+.+.||+|++|.||++.+..+++.|++|++.... ....+..|.++++.+.+ ++++.+..++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH--PNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC--CCEeEEEEEEecCCeEEEEEec
Confidence 5899999999999999999998899999999987665 34568889998888874 8999999999888999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..+..++.|++.||.|||++|++|+||+|+||+++ +.+.++|+|||++........
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccccccc--
Confidence 9 6999999986556799999999999999999999999999999999999994 678999999999987654321
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
.....|+..|++||.+.+..++.++||||||+++|+|++|..||..... ................ ....
T Consensus 154 ------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~--~~~~ 222 (253)
T cd05122 154 ------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP---MKALFKIATNGPPGLR--NPEK 222 (253)
T ss_pred ------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHHhcCCCCcC--cccc
Confidence 1345789999999999988899999999999999999999999976432 2222222211111100 0112
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
++.++.+++.+||..||++||++.++++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 4789999999999999999999988754
No 327
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=297.96 Aligned_cols=254 Identities=16% Similarity=0.190 Sum_probs=207.0
Q ss_pred ccCCceEEe-eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeE----eCCE
Q 011882 4 RVGNKFRLG-RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGV----EGDY 78 (475)
Q Consensus 4 ~i~~~y~l~-~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~----~~~~ 78 (475)
.|.++|++- ++||-|-.|.|-.+.++.|++.+|+|++. +.+...+|+++...... |+||+.+.++++ ....
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~---Ds~KARrEVeLHw~~s~-h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL---DSPKARREVELHWMASG-HPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHh---cCHHHHhHhhhhhhhcC-CCceEEeehhhhhhccCcee
Confidence 366788874 78999999999999999999999999875 44667889988776655 499999877654 3456
Q ss_pred EEEEEEcC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..+|||+| ||.|...++..+ ..|++.++..|+.||+.|+.|||+.+|.||||||+|+|......+..+||+|||+|+.
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccc
Confidence 78999999 999999887654 3599999999999999999999999999999999999998777778899999999996
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHHHHHhhcccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVS 235 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~ 235 (475)
-..... ..+.+-|+.|+|||++-...|+...|+||+||++|-|++|..||........ ...-.+|....+.
T Consensus 214 t~~~~~--------L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~ 285 (400)
T KOG0604|consen 214 TQEPGD--------LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYE 285 (400)
T ss_pred cCCCcc--------ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCcc
Confidence 543222 2345789999999999988999999999999999999999999986543221 1222344444443
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
.+-++ +..+++..+++|+.+|..+|.+|.|+.++
T Consensus 286 FP~pE-Ws~VSe~aKdlIR~LLkt~PteRlTI~~~ 319 (400)
T KOG0604|consen 286 FPEPE-WSCVSEAAKDLIRKLLKTEPTERLTIEEV 319 (400)
T ss_pred CCChh-HhHHHHHHHHHHHHHhcCCchhheeHHHh
Confidence 33333 35678899999999999999999997766
No 328
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-36 Score=305.59 Aligned_cols=250 Identities=22% Similarity=0.247 Sum_probs=198.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEe-CCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVE-GDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~-~~~~ 79 (475)
+.++|++.+.||.|+||.||+|.+..+++.||||.+.... ....+..|++++..+.| ++++.+..++.. ....
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~ 85 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH--ENIISLSDIFISPLEDI 85 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCC--CCeeeEeeeEecCCCcE
Confidence 5788999999999999999999999999999999764322 23457789999888875 899998887654 5678
Q ss_pred EEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 80 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 80 ~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+++|||++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.++|+|||++.....
T Consensus 86 ~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 86 YFVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCC
Confidence 9999999999998886 3468899999999999999999999999999999999999 4778999999999975432
Q ss_pred cccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH---------
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI--------- 229 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i--------- 229 (475)
. .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+.+.
T Consensus 161 ~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 161 Q----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred C----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 1 123467889999999876 56899999999999999999999999764321111111110
Q ss_pred --------------hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 230 --------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 230 --------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.......+....+..++.++.++|.+||+.+|++||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000111223344456789999999999999999999988773
No 329
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.9e-37 Score=298.78 Aligned_cols=252 Identities=18% Similarity=0.320 Sum_probs=195.9
Q ss_pred eEEeeeEeeeCceeEEEEEEcc---CCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC----
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD---- 77 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~---~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~---- 77 (475)
|++.+.||+|+||.||+|.+.. +++.||||++..+... .++..|+.+++.+.| ++++.+++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH--PNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC--CCcceEEEEEccCCCCCc
Confidence 6788999999999999998653 5789999988654332 246778888888865 89999988775432
Q ss_pred --EEEEEEEcC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 78 --YNVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 78 --~~~lvme~~-g~sL~~ll~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
..+++++|+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||++ +.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEEC
Confidence 347888888 88998876422 1247899999999999999999999999999999999999 467889999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~ 228 (475)
|||+++.+..... +.......++..|++||.+.+..++.++|||||||++|||++ |..||.+... ...+..
T Consensus 156 dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~ 227 (273)
T cd05074 156 DFGLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNY 227 (273)
T ss_pred cccccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHH
Confidence 9999986543221 111223356678999999998889999999999999999999 8999976432 222222
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
+...... .....++..+.+++.+||..+|++||++.++++.|+.+
T Consensus 228 ~~~~~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 LIKGNRL----KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHcCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2221111 11235678999999999999999999999999998865
No 330
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=9e-37 Score=296.62 Aligned_cols=248 Identities=25% Similarity=0.352 Sum_probs=197.7
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-------chHHHHHHHHHHHHhCCCCCcCeeEEeeEe--CC
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLQYEAKLYKILQGGSTGIPNLRWFGVE--GD 77 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~--~~ 77 (475)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+..|+++++.+++ ++++.+.++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~~~ 79 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH--DRIVQYYGCLRDPEEK 79 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCC--CCcceEEEEEEcCCCC
Confidence 579999999999999999999999999999998753211 1246778889988875 889988877654 35
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||++ +.++.++|+|||+++.
T Consensus 80 ~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccc
Confidence 688999999 7899998874 3458999999999999999999999999999999999999 4678899999999986
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
........ .......|+..|+|||++.+..++.++|||||||++|+|++|..||..... ...+.++... .
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~---~ 225 (264)
T cd06653 156 IQTICMSG----TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA---MAAIFKIATQ---P 225 (264)
T ss_pred cccccccC----ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH---HHHHHHHHcC---C
Confidence 54321100 011245689999999999998899999999999999999999999976432 2222222211 1
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+.++..+++++.+++.+||. ++..||++.+++
T Consensus 226 ~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~ 259 (264)
T cd06653 226 TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLL 259 (264)
T ss_pred CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHh
Confidence 1223456788999999999999 579999988764
No 331
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.2e-37 Score=308.98 Aligned_cols=247 Identities=21% Similarity=0.285 Sum_probs=194.7
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--- 76 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--- 76 (475)
.+.++|.+.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.+.| ++++.+..++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~ 89 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQH--ENVIGLLDVFTSAVSG 89 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCC--CCccchhheecccccC
Confidence 356899999999999999999999999999999998764321 2346788898888865 8898887776543
Q ss_pred ---CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 ---DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ---~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
...++||+|+..+|..++ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~ 163 (342)
T cd07879 90 DEFQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGL 163 (342)
T ss_pred CCCceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCC
Confidence 346899999988887765 3469999999999999999999999999999999999999 4778999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.... ..+..+...
T Consensus 164 ~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~---~~~~~~~~~ 230 (342)
T cd07879 164 ARHADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKV 230 (342)
T ss_pred CcCCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHh
Confidence 9754321 123467899999999876 45899999999999999999999999864321 111111110
Q ss_pred --------------------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 --------------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 --------------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
........+...++.++.++|.+||+.||++||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 001112222345678899999999999999999998885
No 332
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.1e-37 Score=298.24 Aligned_cols=250 Identities=21% Similarity=0.315 Sum_probs=197.8
Q ss_pred ceEEeeeEeeeCceeEEEEEEcc-CCeEEEEEEeccCCC---------c---hHHHHHHHHHHHHhCCCCCcCeeEEeeE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTK---------H---PQLQYEAKLYKILQGGSTGIPNLRWFGV 74 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~-~~~~vAvKi~~~~~~---------~---~~~~~E~~il~~l~~~~~~i~~l~~~~~ 74 (475)
.|++.+.||+|+||.||+|.+.. +++.||||.+..... . .++..|..++... ..|++++.+..++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~~h~~i~~~~~~~~ 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-LRHPNIVRYYKTFL 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-CCCCCeeeEEeeEc
Confidence 48899999999999999999877 678999998654321 1 1244455554432 23499999999999
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
..+..+++|||+ +++|.+++.. ....+++..++.++.|++.||.|||+ .+|+|+||||+|||+ +..+.+||+
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~ 156 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTIT 156 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEe
Confidence 999999999999 7899988753 24468999999999999999999996 789999999999999 477899999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 229 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i 229 (475)
|||++........ .....|+..|++||++.+..++.++||||||+++|||++|..||..... ......+
T Consensus 157 dfg~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~---~~~~~~~ 225 (269)
T cd08528 157 DFGLAKQKQPESK--------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM---LSLATKI 225 (269)
T ss_pred cccceeecccccc--------cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---HHHHHHH
Confidence 9999986544321 1345789999999999998899999999999999999999999975332 2222333
Q ss_pred hhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 230 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 230 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
........ ....++.++.+++.+||..||++||++.++...+.
T Consensus 226 ~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VEAVYEPL---PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hhccCCcC---CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 32222111 11356789999999999999999999999988765
No 333
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.9e-37 Score=307.78 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=201.5
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC-----E
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD-----Y 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~-----~ 78 (475)
+|++.+.||.|+||.||+|.+..+++.||||.+.... ....+..|+.+++.+.+ ++++.+.++..... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH--ENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC--cchhhhhhhhcccCcccccc
Confidence 5999999999999999999998889999999876533 23467889999998874 88998887776654 7
Q ss_pred EEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
.|++|+|++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++....
T Consensus 79 ~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeec
Confidence 899999998899988863 4479999999999999999999999999999999999999 467899999999998765
Q ss_pred ccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----- 232 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~----- 232 (475)
...... .......++..|+|||++.+. .++.++|||||||++|+|++|..||.+.... +.+..+...
T Consensus 155 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~ 227 (330)
T cd07834 155 PDEDEK----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI---DQLNLIVEVLGTPS 227 (330)
T ss_pred cccccc----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH---HHHHHHHHhcCCCC
Confidence 542110 112345689999999999988 7899999999999999999999999775432 112221110
Q ss_pred ---------------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ---------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ---------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
........+...++.++.+++.+||+.+|++||++.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 287 (330)
T cd07834 228 EEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEAL 287 (330)
T ss_pred hhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 001112223345788999999999999999999988875
No 334
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.7e-36 Score=302.88 Aligned_cols=244 Identities=24% Similarity=0.339 Sum_probs=198.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.+.|...++||+|+||.||+|.+..+++.|+||++...... ..+..|..+++.++| ++++.+..++.+....|
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH--PNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC--CCCccEEEEEEeCCEEE
Confidence 34577788999999999999999999999999987643321 346678888888865 99999999999999999
Q ss_pred EEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 81 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 81 lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+||||+.++|.+++......+++.+++.++.||+.||.|||++||+|+||||+||++ +.++.+||+|||++.....
T Consensus 98 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 98 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP- 173 (313)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC-
Confidence 999999889999887666779999999999999999999999999999999999999 4678899999999864321
Q ss_pred ccccccccccCCCCccCcccccccccc---CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~---g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
.....|+..|+|||++. +..++.++|||||||++|||++|..||...... .....+.......
T Consensus 174 ----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~~~~~~~~~~~~~- 239 (313)
T cd06633 174 ----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQNDSPT- 239 (313)
T ss_pred ----------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCC-
Confidence 13457899999999985 356889999999999999999999999764332 2222222211111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.....++..+.+++.+||+.+|.+||++.+++
T Consensus 240 --~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l 271 (313)
T cd06633 240 --LQSNEWTDSFRGFVDYCLQKIPQERPASAELL 271 (313)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 11234678899999999999999999988875
No 335
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-36 Score=308.14 Aligned_cols=250 Identities=21% Similarity=0.284 Sum_probs=197.5
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC---
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD--- 77 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~--- 77 (475)
+.++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.+.| ++++.+..++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKH--ENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCC--CCccceeeeecCCcccc
Confidence 67889999999999999999999999999999998754322 2346789999988876 88888877665432
Q ss_pred ---EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 78 ---YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 78 ---~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
..++||+|++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|||++ ..+.++|+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccc
Confidence 468999999999998886 35799999999999999999999999999999999999994 6788999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK- 232 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~- 232 (475)
....... ....++..|++||++.+ ..++.++|||||||++|+|++|..||.+.........+.++...
T Consensus 166 ~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07880 166 RQTDSEM----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTP 235 (343)
T ss_pred cccccCc----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 7653321 23467899999999876 35789999999999999999999999864332111111111000
Q ss_pred ----------------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ----------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ----------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.....+..+...++.++.++|.+|+..||++||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred CHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000112233356788899999999999999999988875
No 336
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=351.71 Aligned_cols=259 Identities=22% Similarity=0.351 Sum_probs=212.1
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
|.-+|.-..+||.|.||.||-|.+..+|+..|+|-++... ..+.+..|..++..+.| +|++.++++.+..+..+
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH--pNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH--PNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC--ccccccCceeecHHHHH
Confidence 4457888899999999999999999999999999655432 33568899999999988 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|.|||| ||+|.+++. .++..++.....+..|++.||.|||++|||||||||+||+| +.++.+|++|||.|..+..
T Consensus 1311 IFMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecC
Confidence 999999 999999998 45567777788899999999999999999999999999999 5788999999999998766
Q ss_pred cccccccccccCCCCccCccccccccccCCC---CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~---~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
.. +.++ .+.+.+.||+.|||||++.|.. -..++||||||||+.||+||+.||..++.. .+.+.++..+..+
T Consensus 1387 ~~--~~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--~aIMy~V~~gh~P- 1460 (1509)
T KOG4645|consen 1387 NA--QTMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE--WAIMYHVAAGHKP- 1460 (1509)
T ss_pred ch--hcCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch--hHHHhHHhccCCC-
Confidence 52 1222 3445679999999999998654 578999999999999999999999886542 3333333333222
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
.++..++.+-.++|.+||..||+.|.++.+| |+..|-+.
T Consensus 1461 ---q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~ql---le~~f~~~ 1499 (1509)
T KOG4645|consen 1461 ---QIPERLSSEGRDFLEHCLEQDPKMRWTASQL---LEHAFGKS 1499 (1509)
T ss_pred ---CCchhhhHhHHHHHHHHHhcCchhhhHHHHH---HHhhcccc
Confidence 2334478999999999999999999886654 55555443
No 337
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.1e-36 Score=292.76 Aligned_cols=246 Identities=23% Similarity=0.299 Sum_probs=205.3
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||.|+||.||++.+..+++.||+|.+..... ...+..|.++++.+++ ++++.+..........+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH--PNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC--CChhheEEEEecCCEEEEEE
Confidence 58999999999999999999998999999999876533 2457788888888874 89999988888889999999
Q ss_pred EcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 84 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 84 e~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|++ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||+|+||++ +..+.++|+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeeccc
Confidence 999 78999998764 3679999999999999999999999999999999999999 4678999999999987654
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... ......|++.|+|||.+.+..++.++||||||+++|+|++|..||.... ..+......... ..
T Consensus 156 ~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~----~~ 221 (258)
T cd08215 156 TVD-------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN---LLELALKILKGQ----YP 221 (258)
T ss_pred Ccc-------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc---HHHHHHHHhcCC----CC
Confidence 321 1233578999999999999889999999999999999999999997643 233333332222 12
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+...++.++.+++.+||..+|++||++.++++
T Consensus 222 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 233467899999999999999999999988854
No 338
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.2e-36 Score=292.78 Aligned_cols=251 Identities=24% Similarity=0.420 Sum_probs=201.4
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||+|+||.||+|.+..+++.||||+++..... ..+..|..+++.+.+ ++++.+..+....+..++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH--PNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC--CChhheeeeEecCCEEEEEE
Confidence 599999999999999999999889999999998765442 357788888888865 89999999988999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++.. ...+++..+..|+.|++.||.|||+.||+|+||||+||+++ ..+.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 79 EYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred ecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCCC
Confidence 999 8899999874 34589999999999999999999999999999999999994 678999999999987654332
Q ss_pred ccccccccCCCCccCccccccccccCCC---CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~---~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
.... ......++..|++||++.+.. ++.++|||||||++||+++|..||..... .......+.... ...++
T Consensus 155 ~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~-~~~~~ 228 (264)
T cd06626 155 TMGE---EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EFQIMFHVGAGH-KPPIP 228 (264)
T ss_pred cccc---cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc--hHHHHHHHhcCC-CCCCC
Confidence 1100 012357889999999998776 88999999999999999999999976432 112222222211 11111
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
. ...++..+.+++..||..+|++||++.+++
T Consensus 229 ~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 229 D-SLQLSPEGKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred c-ccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1 123588999999999999999999988875
No 339
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.3e-36 Score=298.91 Aligned_cols=250 Identities=22% Similarity=0.345 Sum_probs=205.1
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..+.|++.+.||+|+||.||+|.+..++..|++|++..... ...+..|.++++.+.+ ++++.++.++......++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH--PNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC--CCeeEEEEEEEECCEEEEEE
Confidence 35679999999999999999999988899999999876543 4467788888888865 89999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||++ +.++.++|+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhccchh
Confidence 999 699999998654479999999999999999999999999999999999999 4678999999999876543321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......++..|++||++.+..++.++|||||||++|+|++|..||..... ......+....... .. ..
T Consensus 172 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~-~~ 239 (286)
T cd06614 172 -------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP---LRALFLITTKGIPP-LK-NP 239 (286)
T ss_pred -------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcCCCC-Cc-ch
Confidence 11234678899999999988899999999999999999999999976432 22222222222111 11 11
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..++.++.++|.+||+.+|.+||++.+|+
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il 268 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELL 268 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 34789999999999999999999998884
No 340
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.2e-37 Score=302.59 Aligned_cols=247 Identities=21% Similarity=0.311 Sum_probs=199.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... ...+..|..+++.+.| ++++.++.++...+..|+|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH--PNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC--CCeeehhheeeeCCcEEEEE
Confidence 4689999999999999999999988999999998764432 2356778888887764 89999999988899999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||+ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||++ +..+.++|+|||++..+.....
T Consensus 96 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 96 EYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred ecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceeccccccc
Confidence 999 8899998863 468899999999999999999999999999999999999 4678899999999876544322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
......|++.|++||.+.+..++.++|||||||++|++++|..||....... .+..+....... ....
T Consensus 171 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~---~~~~~~~~~~~~--~~~~ 238 (293)
T cd06647 171 -------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNGTPE--LQNP 238 (293)
T ss_pred -------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh---heeehhcCCCCC--CCCc
Confidence 1133578999999999998889999999999999999999999997643211 111111111000 0112
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..++..+.+++.+||..+|++||++.+++
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 34678899999999999999999988774
No 341
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=323.31 Aligned_cols=248 Identities=19% Similarity=0.314 Sum_probs=208.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+.|.|+..||.|+||.||+|.++.++-..|-|++..+... .++.-|++||..+.| |+|+.++..+..++..+|.+|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdH--P~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDH--PVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCC--hHHHHHHHHHhccCceEEEEe
Confidence 4588999999999999999999999988999988665433 457778999888875 999999888888889999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
|| ||-...++-..++.+++.++.-+++|++.||.|||+++|||||||..|||++ -+|.|+|+|||.+........
T Consensus 110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~t~q- 185 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKSTRQ- 185 (1187)
T ss_pred ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchhHHh-
Confidence 99 7777777777888999999999999999999999999999999999999996 678999999999865443222
Q ss_pred cccccccCCCCccCccccccccccC-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g-----~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
....|.||++|||||+..+ .+|+.++||||||++|.||..+.+|...+.. ...+.+|.....++.+
T Consensus 186 ------kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---MRVllKiaKSePPTLl 256 (1187)
T KOG0579|consen 186 ------KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPTLL 256 (1187)
T ss_pred ------hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---HHHHHHHhhcCCCccc
Confidence 2357899999999998764 5799999999999999999999999877544 4445555544443322
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
-+..++..|.+|+..||..||..||++++|+
T Consensus 257 --qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll 287 (1187)
T KOG0579|consen 257 --QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLL 287 (1187)
T ss_pred --CcchhhhHHHHHHHHHHhcCCccCCCHHHHh
Confidence 2345778999999999999999999998875
No 342
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=316.38 Aligned_cols=247 Identities=23% Similarity=0.309 Sum_probs=209.3
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch----HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~----~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
....+.|.+.+.||+|.|+.|.+|.+..++..||||++....... .+.+|+++++.|.| |||++++.+.+....
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H--PnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH--PNIVKLFSVIETEAT 129 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC--cceeeeeeeeeecce
Confidence 345578999999999999999999999999999999987655432 36789999998887 999999999999999
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.|+||||+ ++.+.+++...+ ...+.++..++.|++.|++|||+++|||||||.+|||| +.+..+||+|||++..+
T Consensus 130 lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFF 205 (596)
T ss_pred eEEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceee
Confidence 99999999 999999998554 56669999999999999999999999999999999999 57788999999999988
Q ss_pred cccccccccccccCCCCccCccccccccccCCCC-CCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~-s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
..... ..+++|++.|+|||++.|.+| ++.+|+||+|++||-|+.|.+||.+.... ..-..+...++..
T Consensus 206 ~~~~~--------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---~Lr~rvl~gk~rI 274 (596)
T KOG0586|consen 206 DYGLM--------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---ELRPRVLRGKYRI 274 (596)
T ss_pred ccccc--------ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc---cccchheeeeecc
Confidence 75432 357899999999999999987 78999999999999999999999874332 2222333333322
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.-.++.+..++|.++|.++|.+|++.+++.
T Consensus 275 -----p~~ms~dce~lLrk~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 275 -----PFYMSCDCEDLLRKFLVLNPSKRGPCDQIM 304 (596)
T ss_pred -----cceeechhHHHHHHhhccCccccCCHHHhh
Confidence 233567899999999999999999988764
No 343
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.9e-36 Score=296.66 Aligned_cols=238 Identities=21% Similarity=0.241 Sum_probs=190.9
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||+|+||.||+|.+..+++.||+|++.... ....+..|.++++.+++ ++++.+.......+..|+||||+ ++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS--RFIVSLAYAFETKDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC--CCEeeeeeEEecCCeEEEEEecCCCC
Confidence 689999999999999999999999876432 12235678888888864 99999988888889999999999 78
Q ss_pred CHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccc
Q 011882 89 SLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 167 (475)
Q Consensus 89 sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~ 167 (475)
+|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+||++ +.++.++|+|||++........
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~----- 150 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKK----- 150 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCc-----
Confidence 9999887543 369999999999999999999999999999999999999 4778999999999976543211
Q ss_pred cccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChH
Q 011882 168 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 247 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 247 (475)
.....++..|++||++.+..++.++|||||||++|+|++|..||...........+.... . .....+...+++
T Consensus 151 ---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~ 223 (277)
T cd05577 151 ---IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT---L-EMAVEYPDKFSP 223 (277)
T ss_pred ---cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc---c-cccccCCccCCH
Confidence 123467889999999998889999999999999999999999997654322222222111 1 111123345789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHH
Q 011882 248 EFASYFHYCRSLRFDDKPDYAY 269 (475)
Q Consensus 248 ~l~~li~~cl~~dp~~RPt~~~ 269 (475)
++.++|.+||..+|.+||++.+
T Consensus 224 ~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 224 EAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHHccCChhHccCCCc
Confidence 9999999999999999995443
No 344
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2e-36 Score=306.60 Aligned_cols=250 Identities=20% Similarity=0.290 Sum_probs=194.2
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC----
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG---- 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~---- 76 (475)
+.++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+.++..++| ++|+.+..+....
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH--ENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC--Ccccceeeeeeeccccc
Confidence 56889999999999999999999999999999998764321 2346678888888865 8898887665432
Q ss_pred --CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 77 --DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 77 --~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
...|+++++++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~~ 167 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA 167 (345)
T ss_pred ccccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEeccccc
Confidence 3478999999999998886 3469999999999999999999999999999999999999 46788999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK- 232 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~- 232 (475)
+..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|..||...........+......
T Consensus 168 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 168 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred cccccc----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 754321 123578899999999877 46889999999999999999999999764322111111111000
Q ss_pred ----------------------cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 233 ----------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 233 ----------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.............++++.++|..||..||.+||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 298 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHh
Confidence 000011112234578899999999999999999987764
No 345
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-38 Score=322.86 Aligned_cols=271 Identities=23% Similarity=0.313 Sum_probs=210.3
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC---CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--- 76 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~---~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--- 76 (475)
+-....|...+.||+|+||.||+|+++.+|+.||||.++.. ...+...+|++++++|+| +||+.+.+..++.
T Consensus 9 ~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh--~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 9 SGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNH--PNIVKLFDIEETKFLG 86 (732)
T ss_pred cCCCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCc--hhhhhhcccCCccccC
Confidence 34456788999999999999999999999999999988763 334567889999999994 9999987776543
Q ss_pred ---CEEEEEEEcC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC-CCCcEEEe
Q 011882 77 ---DYNVLVIDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR-RANQVYII 149 (475)
Q Consensus 77 ---~~~~lvme~~-g~sL~~ll~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~-~~~~vkL~ 149 (475)
...++||||| ||||...++... ..+++.+++.++..++.||.|||++|||||||||.||++-.+. .....||+
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence 3568999999 999999998543 2499999999999999999999999999999999999996543 33357999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCC-HHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-KKQKYE 227 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~-~~~~~~ 227 (475)
|||.|+.+.+... ...+.||..|.+||++.. ..|+..+|.|||||++|+++||.+||-...... ..+...
T Consensus 167 DfG~Arel~d~s~--------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~ 238 (732)
T KOG4250|consen 167 DFGAARELDDNSL--------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMW 238 (732)
T ss_pred cccccccCCCCCe--------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhh
Confidence 9999999887653 356899999999999994 789999999999999999999999997543321 122222
Q ss_pred HHhhccccc-----------------cH---HHHhcCChHHHHHHHHHHhcCCCCCCC--CHHHHHHHHHHHHHHcCC
Q 011882 228 KISEKKVST-----------------SI---EALCRGYPTEFASYFHYCRSLRFDDKP--DYAYLKRLFRDLFIREGF 283 (475)
Q Consensus 228 ~i~~~~~~~-----------------~~---~~l~~~~p~~l~~li~~cl~~dp~~RP--t~~~l~~~L~~l~~~~~~ 283 (475)
.+..++... .+ ..++.++-..+...+..+|..+|.+|- .+.+....+.+++...-.
T Consensus 239 ~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vv 316 (732)
T KOG4250|consen 239 HIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVV 316 (732)
T ss_pred hhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhee
Confidence 222111100 00 111122223466778888899999998 777777778888766543
No 346
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-36 Score=299.69 Aligned_cols=256 Identities=18% Similarity=0.271 Sum_probs=202.1
Q ss_pred ceEEeeeEeeeCceeEEEEEEc---cCCeEEEEEEeccCC------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
+|++.+.||+|+||.||++.+. .+++.||||+++... ....+..|..++..+.++ ++++.+......+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~-~~i~~~~~~~~~~~~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC-PFLVTLHYAFQTDTK 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC-cchhhhheeeecCCE
Confidence 4899999999999999999864 467899999876432 123466788888888654 899999888888899
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.++||||+ +++|.+.+.. ...+++..++.++.|++.||.|||+.|++||||||.||++ +.++.++|+|||+++.+
T Consensus 80 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECcccccc
Confidence 99999999 7899988863 3568999999999999999999999999999999999999 46788999999999865
Q ss_pred cccccccccccccCCCCccCccccccccccCCC--CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHH-HHHhhccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY-EKISEKKV 234 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~--~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~-~~i~~~~~ 234 (475)
...... ......|+..|++||.+.+.. .+.++||||||+++|||++|..||...........+ ..+....
T Consensus 156 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 228 (288)
T cd05583 156 LAEEEE------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK- 228 (288)
T ss_pred cccccc------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-
Confidence 443211 122356899999999988765 788999999999999999999999653222111111 1111111
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
......++.++.+++.+||+.+|++||++.++.++|+..+.
T Consensus 229 ----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~ 269 (288)
T cd05583 229 ----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFF 269 (288)
T ss_pred ----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccc
Confidence 11234568899999999999999999999999888887653
No 347
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.3e-36 Score=302.96 Aligned_cols=245 Identities=21% Similarity=0.308 Sum_probs=198.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
...|+..+.||+|+||.||+|.+..+++.||||.+..... ...+..|+++++.++| ++++.+..++......+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH--PNTIQYRGCYLREHTAW 91 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCC--CCcccEEEEEEcCCeeE
Confidence 3458888999999999999999999999999998754321 1246678888888765 88999999988999999
Q ss_pred EEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 81 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 81 lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+||||+.++|.+++......+++.+++.++.|++.||.|||+++|+||||||+|||+ +.++.++|+|||++......
T Consensus 92 lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecCc
Confidence 999999889988887666679999999999999999999999999999999999999 46789999999998765332
Q ss_pred ccccccccccCCCCccCccccccccccC---CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g---~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
....|+..|+|||.+.+ ..++.++|||||||++|+|++|..||...... .....+.......
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~- 233 (308)
T cd06634 169 -----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQNESPA- 233 (308)
T ss_pred -----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH---HHHHHHhhcCCCC-
Confidence 23468899999999853 45788999999999999999999999764322 1222222211111
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.....++..+.++|.+||..+|++||++.++++
T Consensus 234 --~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 234 --LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred --cCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 112357789999999999999999999988754
No 348
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.3e-36 Score=297.65 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=198.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
.|.-.++||+|++|.||++.+..+++.|+||.+..... ...+.+|+.+++.+.+ ++++.+..++...+..++++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h--~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH--PNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC--CChheEEEEEEcCCeEEEEEec
Confidence 56677899999999999999988999999998764432 2346778888887765 8999999998899999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++.. .++++..+..++.||+.||.|||++||+||||||+||++ +.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~-- 170 (285)
T cd06648 98 LEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVP-- 170 (285)
T ss_pred cCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCc--
Confidence 9 8899999874 579999999999999999999999999999999999999 4778999999999875543211
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 244 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 244 (475)
......|+..|+|||++.+..++.++|||||||++|||++|..||..... ...+..+....... .. ....
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---~~~~~~~~~~~~~~-~~-~~~~ 240 (285)
T cd06648 171 -----RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---LQAMKRIRDNLPPK-LK-NLHK 240 (285)
T ss_pred -----ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHHhcCCCC-Cc-cccc
Confidence 11235689999999999988899999999999999999999999976332 23333333221111 11 1133
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 245 YPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 245 ~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
++..+.+++.+||..+|++||++.+++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHc
Confidence 678999999999999999999988775
No 349
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.6e-36 Score=288.94 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=206.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DYNVL 81 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~~~l 81 (475)
+|++.+.||+|++|.||+|.+..+++.|++|++..... ...+..|.++++.+.+ ++++.+....... ...++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH--PNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC--CCEeeEEEEEecCCCCeEEE
Confidence 58899999999999999999988999999999876543 3567888888888875 8999998888887 89999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
+||++ +++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||++. ..+.++|+|||.+......
T Consensus 79 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEecccc
Confidence 99999 999999987544 899999999999999999999999999999999999994 6789999999999877654
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 240 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (475)
... .......++..|++||.+.+..++.++||||||+++|+|++|..||.... ........+.... ....
T Consensus 155 ~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~---~~~~ 224 (260)
T cd06606 155 ETG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGSSG---EPPE 224 (260)
T ss_pred ccc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhccccC---CCcC
Confidence 321 01134578999999999998889999999999999999999999998754 2222222222211 1122
Q ss_pred HhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 241 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 241 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
+...++.++.+++.+||..+|++||++.+++.
T Consensus 225 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 33556899999999999999999999888753
No 350
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=9.3e-37 Score=308.69 Aligned_cols=247 Identities=21% Similarity=0.306 Sum_probs=196.6
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC---
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD--- 77 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~--- 77 (475)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.+ ++++.+..+....+
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDH--ENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccC--CCHHHHHHHhhcccccc
Confidence 5788999999999999999999999999999999876432 12346678888888865 88887766554443
Q ss_pred ---EEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 78 ---YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 78 ---~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
..++|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~dfg~~ 165 (343)
T cd07851 91 DFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLA 165 (343)
T ss_pred ccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEcccccc
Confidence 3899999999999999873 579999999999999999999999999999999999999 46788999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
...... .....++..|+|||.+.+. .++.++|||||||++|||++|..||.+... ...+..+....
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~---~~~~~~i~~~~ 232 (343)
T cd07851 166 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH---IDQLKRIMNLV 232 (343)
T ss_pred cccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhc
Confidence 865432 1234688899999998753 578999999999999999999999976432 22222221110
Q ss_pred --------------------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 234 --------------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 234 --------------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.......+...++.++.++|.+||..+|++||++.+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHh
Confidence 01112223345688999999999999999999988874
No 351
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.1e-36 Score=293.78 Aligned_cols=249 Identities=18% Similarity=0.264 Sum_probs=186.9
Q ss_pred eeEeeeCceeEEEEEEccC--CeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 13 RKIGSGSFGEIYLGTNIQT--NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~--~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
+.||+|+||.||+|..... ...+++|.++.... ...+..|+.++..++| ++++.+...+......|+||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH--PNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC--cchhheEEEecCCCccEEEEecCC
Confidence 3699999999999975433 23567776654432 2457778888887765 99999999999889999999999
Q ss_pred CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 87 GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 87 g~sL~~ll~~~~---~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
+++|.+++.... ..+....++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDY- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchh-
Confidence 789999987532 346777889999999999999999999999999999999 4678899999999864322110
Q ss_pred cccccccCCCCccCccccccccccC-------CCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhc-cc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLG-------IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK-KV 234 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g-------~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~-~~ 234 (475)
........|+..|+|||++.+ ..++.++|||||||++|||++ |..||..... ...+..+... ..
T Consensus 155 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~~ 227 (268)
T cd05086 155 ----IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---REVLNHVIKDQQV 227 (268)
T ss_pred ----hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhhccc
Confidence 011234578899999998753 245789999999999999996 5778865432 2333332221 11
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 275 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 275 (475)
....+.+...+++.+.+++..|| .+|++||++++|++.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 KLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11122334457889999999999 67999999999987763
No 352
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2e-36 Score=293.47 Aligned_cols=234 Identities=18% Similarity=0.244 Sum_probs=192.0
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||.|+||.||+|.+..+++.||||++..... ...+..|+.+++.+.| ++++.+..+...+...+++|||+ ++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH--PFIVKLYRTFKDKKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC--CCEeeeeeeEEcCCccEEEEecCCCC
Confidence 6999999999999988899999998765332 2457788888888865 89999999989999999999998 88
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
+|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||++ +.++.++|+|||+++.......
T Consensus 79 ~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~------ 148 (262)
T cd05572 79 ELWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQK------ 148 (262)
T ss_pred cHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccc------
Confidence 99999874 3468999999999999999999999999999999999999 4678999999999987654321
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 248 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 248 (475)
.....|+..|++||.+.+..++.++||||||+++|+|++|..||..... +..+.+..+........ ....++.+
T Consensus 149 --~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~ 222 (262)
T cd05572 149 --TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKLE---FPNYIDKA 222 (262)
T ss_pred --cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCCC---CCcccCHH
Confidence 1234688999999999988899999999999999999999999987542 22333333332111111 12344789
Q ss_pred HHHHHHHHhcCCCCCCCC
Q 011882 249 FASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 249 l~~li~~cl~~dp~~RPt 266 (475)
+.+++.+||..+|++||+
T Consensus 223 ~~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 223 AKDLIKQLLRRNPEERLG 240 (262)
T ss_pred HHHHHHHHccCChhhCcC
Confidence 999999999999999999
No 353
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.4e-36 Score=288.47 Aligned_cols=245 Identities=23% Similarity=0.358 Sum_probs=203.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.+.||+|++|.||++.+..+++.|+||.+..... ...+..|++++..+.+ ++++.+..+.......+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH--PNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC--CCccEEEEEEEeCCEEEEEE
Confidence 58999999999999999999988999999998866543 2357788888888865 88999998888889999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|++ +++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++ ..+.++|+|||++........
T Consensus 79 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 79 EYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred ecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCcc
Confidence 999 77999998744 5799999999999999999999999999999999999994 578999999999987654322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 242 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 242 (475)
. .....++..|++||.+.+..++.++||||||+++|+|++|..||..... ............ ..+.
T Consensus 155 ~-------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~ 220 (254)
T cd06627 155 D-------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFRIVQDDH----PPLP 220 (254)
T ss_pred c-------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhccCC----CCCC
Confidence 1 2345789999999999888889999999999999999999999976432 222222222211 1233
Q ss_pred cCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 243 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 243 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..++.++.+++.+||..+|++||++.+++.
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 567899999999999999999999888753
No 354
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.2e-36 Score=295.60 Aligned_cols=252 Identities=21% Similarity=0.230 Sum_probs=200.8
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
|++.++||+|+||.||+|++..+++.||+|++.... ....+..|+.+++.+.+ ++++.+..++......++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH--PNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC--CCHHHHHhhhhcCCceEEEec
Confidence 678899999999999999999999999999887643 23456778888888874 999999998888899999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 85 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 85 ~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+++++|.+++......+++..++.++.|++.||.|||++||+||||+|+||++ ++++.++|+|||+++.......
T Consensus 79 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred CcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCcc--
Confidence 99889999998655579999999999999999999999999999999999999 4678999999999986644321
Q ss_pred ccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh------------
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE------------ 231 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~------------ 231 (475)
......++..|+|||.+.+. .++.++|||||||++|||++|..||...........+.....
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 11233567889999999877 789999999999999999999999976432211111111100
Q ss_pred ---------ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 ---------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 ---------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.............++.++.+++..||..+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00011111223345789999999999999999999888753
No 355
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.8e-36 Score=303.18 Aligned_cols=251 Identities=15% Similarity=0.206 Sum_probs=188.5
Q ss_pred eeEeee--CceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 13 RKIGSG--SFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G--~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
..||.| +||+||++.+..+++.||||++...... ..+..|+.+++.++| ++|+.++.++..++..++||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h--~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH--PNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--CCcceEeeeEecCCceEEEEecc
Confidence 456666 9999999999999999999998754432 346677777776665 89999999999999999999999
Q ss_pred -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 87 -GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 87 -g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||+. ..+.++++||+.+..........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCccc
Confidence 78999988754 34589999999999999999999999999999999999994 67889999998765443322111
Q ss_pred ccccccCCCCccCccccccccccCC--CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc-------
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------- 235 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~--~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 235 (475)
...+.......++..|+|||++.+. .++.++|||||||++|||++|..||.+.... +.+.........
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT---QMLLQKLKGPPYSPLDITT 235 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH---HHHHHHhcCCCCCCccccc
Confidence 1111112223467789999999874 4789999999999999999999999764321 111111100000
Q ss_pred -----------------------------------ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 236 -----------------------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 236 -----------------------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.........++.++.+|+.+||..||++||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000011123567899999999999999999999884
No 356
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.1e-36 Score=289.34 Aligned_cols=244 Identities=18% Similarity=0.288 Sum_probs=201.5
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
+|++.++||+|+||.||++.+..+++.||||.+..... ...+..|.++++.+++ ++++.+..++......++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH--PNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC--CCchhhhhhhccCCEEEEEe
Confidence 58999999999999999999999999999998765432 2346678888888874 89999988888889999999
Q ss_pred EcC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 84 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 84 e~~-g~sL~~ll~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
||+ +++|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||+++ ..+.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhcc
Confidence 999 88999988642 34689999999999999999999999999999999999995 578899999999987654
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... ....|+..|++||.+.+..++.++|+||||+++|||++|..||..... ......+......
T Consensus 156 ~~~---------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~---- 219 (256)
T cd08530 156 NMA---------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLRYKVQRGKYP---- 219 (256)
T ss_pred CCc---------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCC----
Confidence 311 234688999999999998899999999999999999999999976432 2222223222222
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+...++.++.+++.+||..+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 223457889999999999999999999988854
No 357
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=318.05 Aligned_cols=248 Identities=21% Similarity=0.355 Sum_probs=209.6
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEE---EEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC--EEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD--YNV 80 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vA---vKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~--~~~ 80 (475)
.+...+||+|+|-+||+|.|..+|.+|| ||+-+.... .+.+..|+++|+.|+| +||++++.++.+.. ...
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H--~NIirfy~SW~d~~n~~in 119 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKH--PNIIRFYDSWVDTDNKTIN 119 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCC--CceeeeeeheecCCCceee
Confidence 4567899999999999999999999987 554333322 2468889999999988 99999987776554 478
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
+|.|++ .|+|..++++. ++++.+.+..|++||+.||.|||++. |||||||-+||+|+ ...|.|||+|+|||+..
T Consensus 120 ~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHh
Confidence 899999 99999999854 57999999999999999999999985 99999999999997 67899999999999988
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
..... +...|||.|||||++. ..|+..+||||||++|+||+|+..||.... ...+.|.++..+..+..
T Consensus 197 r~s~a---------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 197 RKSHA---------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKPAA 264 (632)
T ss_pred hcccc---------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCCCHHH
Confidence 76543 3468999999999998 679999999999999999999999998875 46788999888777655
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
+..+ -.+++++||.+|+.. ..+||++.+| |.+.|..
T Consensus 265 l~kV---~dPevr~fIekCl~~-~~~R~sa~eL---L~d~Ff~ 300 (632)
T KOG0584|consen 265 LSKV---KDPEVREFIEKCLAT-KSERLSAKEL---LKDPFFD 300 (632)
T ss_pred hhcc---CCHHHHHHHHHHhcC-chhccCHHHH---hhChhhc
Confidence 5443 368999999999999 9999997776 5555543
No 358
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-36 Score=296.68 Aligned_cols=248 Identities=25% Similarity=0.403 Sum_probs=202.4
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+..|.+++..+. .|++++.++.++...+..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-GHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-cCCCchhHHHHhcCCceEEE
Confidence 57999999999999999999999999999999876532 1235677888888776 24999999888888899999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|||++ +++|.+++... ..+++..++.|+.||+.||.|||++|++|+||||+||++ +.++.++|+|||++..+...
T Consensus 80 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 80 VLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCc
Confidence 99999 99999999743 479999999999999999999999999999999999999 46788999999999876543
Q ss_pred ccccc-------------cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011882 161 ATHQH-------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 227 (475)
Q Consensus 161 ~~~~~-------------~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~ 227 (475)
..... ........+.|+..|++||++.+..++.++||||||+++|++++|..||.... ..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~ 232 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN---EYLTFQ 232 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHH
Confidence 32110 01122345678999999999998889999999999999999999999998643 233333
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
.+..... .+...+++.+.+++..||..+|++||++
T Consensus 233 ~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 233 KILKLEY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred HHHhcCC-----CCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 3332221 1234568899999999999999999998
No 359
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.7e-36 Score=294.67 Aligned_cols=252 Identities=23% Similarity=0.284 Sum_probs=195.9
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
|++.+.||+|+||.||+|.+..+++.||||.+...... ....+|...+..+.. |++++.++.++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~-h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNE-HPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccC-CCCchhHHHHhhcCCcEEEEEec
Confidence 78999999999999999999888999999987654321 223457777766652 48999998888889999999999
Q ss_pred CCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 LGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
++++|.+++.... ..+++..++.++.||+.+|.|||++||+|+||||+||++ +..+.++|+|||+++.......
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 80 MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC--
Confidence 9999999887543 468999999999999999999999999999999999999 4788999999999986544221
Q ss_pred ccccccCCCCccCccccccccccC-CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc----------
Q 011882 165 HIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK---------- 233 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g-~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~---------- 233 (475)
.....++..|+|||++.+ ..++.++||||||+++|||++|..||......+.......+....
T Consensus 155 ------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 155 ------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred ------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 123468899999998864 457899999999999999999999997653322221111111000
Q ss_pred ------------ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 ------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 ------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
............+..+.+++..||..+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 001112222334688999999999999999999888753
No 360
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-38 Score=302.38 Aligned_cols=257 Identities=19% Similarity=0.266 Sum_probs=202.5
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-CCchHHHHHHHHHHHHhCCCCC----cCeeEEeeEeCCE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGGSTG----IPNLRWFGVEGDY 78 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-~~~~~~~~E~~il~~l~~~~~~----i~~l~~~~~~~~~ 78 (475)
.+.++|++.++||+|.||.|-.+.+..++..||||+++.- ...+....|+++++.+....|+ ++++..++...+.
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3578999999999999999999999999999999987643 3445567899999999664433 4455666777888
Q ss_pred EEEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC----------------
Q 011882 79 NVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR---------------- 141 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~---------------- 141 (475)
.|||+|++|.|+.+++...+ .+|+...+..++.|++++++|||+.+++|-||||+|||+...+
T Consensus 166 iCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred eEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 99999999999999997533 4599999999999999999999999999999999999996321
Q ss_pred -CCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011882 142 -RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 220 (475)
Q Consensus 142 -~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~ 220 (475)
+...|+|+|||.|+.-.+.. ...+.|..|.|||+++|..++..+||||+||||+|+++|...|+.-.+.
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred CCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 13368999999998543322 3568899999999999999999999999999999999999999986544
Q ss_pred CHHHHHHHHhhccccccHHHH----------------------------hcC----------ChHHHHHHHHHHhcCCCC
Q 011882 221 TKKQKYEKISEKKVSTSIEAL----------------------------CRG----------YPTEFASYFHYCRSLRFD 262 (475)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~l----------------------------~~~----------~p~~l~~li~~cl~~dp~ 262 (475)
.....++.|........+..- |+- --.+|.+|++.||..||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 434444444432111111111 100 013589999999999999
Q ss_pred CCCCHHHH
Q 011882 263 DKPDYAYL 270 (475)
Q Consensus 263 ~RPt~~~l 270 (475)
+|+|+.|+
T Consensus 396 ~RiTl~EA 403 (415)
T KOG0671|consen 396 RRITLREA 403 (415)
T ss_pred ccccHHHH
Confidence 99997776
No 361
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=318.30 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=205.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCC---eEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTN---EEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~---~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
++.++.++||+|.||.|+.|.|...+ ..||||.+..... ..+|.+|+.++..|+| +|++++|++..+ ....
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H--~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQH--PHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccC--cceeEEeeeecc-chhh
Confidence 45778899999999999999997543 4799999876653 3679999999999988 899999888776 6678
Q ss_pred EEEEcC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 81 LVIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
||||++ .|+|.+.+.. ....|-...+..++.||+.||.||.++++|||||-..|+||. ....||||||||.+.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceeccC
Confidence 999999 8999998876 345588899999999999999999999999999999999994 68899999999999887
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
..... |.......-...|+|||.+....++.++|||+|||+||||++ |..||.|.... +.+++|..+....
T Consensus 264 ~ned~----Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~---qIL~~iD~~erLp- 335 (1039)
T KOG0199|consen 264 ENEDM----YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI---QILKNIDAGERLP- 335 (1039)
T ss_pred CCCcc----eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH---HHHHhccccccCC-
Confidence 65431 111122233567999999999999999999999999999998 89999997653 4444444322211
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
-.+.||+.+++++..||..+|.+||+|..|.+
T Consensus 336 ---RPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 336 ---RPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred ---CCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 23678999999999999999999999999963
No 362
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=311.62 Aligned_cols=242 Identities=20% Similarity=0.323 Sum_probs=203.4
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcCC
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLLG 87 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~g 87 (475)
.+.||+|.||+||-|++.++|+.||||++.+.. ...++..|+.|++.+.| |.|+.+...++..+..++|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H--PGiV~le~M~ET~ervFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH--PGIVNLECMFETPERVFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC--CCeeEEEEeecCCceEEEEehhhc
Confidence 478999999999999999999999999986542 34578899999998876 999999999999999999999997
Q ss_pred CCHHHHH-HHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 88 PSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 88 ~sL~~ll-~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
|++.++| ...++++++.....++.||+.||.|||.++|+|+||||+|||+...+.-.++||||||+|+.+.+...
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF---- 722 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF---- 722 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh----
Confidence 6666554 55577899999999999999999999999999999999999998776677999999999998876543
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
....+||+.|+|||+++.+.|.+.-|+||.|||+|--+.|.+||.... +..+.++.....-.+.+ ++.++
T Consensus 723 ----RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~P----W~eis 792 (888)
T KOG4236|consen 723 ----RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNP----WSEIS 792 (888)
T ss_pred ----hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCc----hhhcC
Confidence 246799999999999999999999999999999999999999997632 23333333333222222 35567
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAY 269 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~ 269 (475)
.+..+||..+|+..-.+|-+.+.
T Consensus 793 ~~AidlIn~LLqVkm~kRysvdk 815 (888)
T KOG4236|consen 793 PEAIDLINNLLQVKMRKRYSVDK 815 (888)
T ss_pred HHHHHHHHHHHHHHHHHhcchHh
Confidence 89999999999999999977543
No 363
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-35 Score=292.97 Aligned_cols=243 Identities=17% Similarity=0.284 Sum_probs=192.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEc---cCCeEEEEEEeccCC------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDY 78 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~ 78 (475)
+|++.+.||.|+||.||+|.+. .+|+.||+|++.... ....+..|+.++..+.++ ++|+.++..+..+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~i~~~~~~~~~~~~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTDTK 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC-CChhceeeEeecCCe
Confidence 5899999999999999999874 478999999876432 123467788888888653 899999888888899
Q ss_pred EEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
.++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++..+
T Consensus 80 ~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 80 LHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceec
Confidence 99999999 7899998874 4568999999999999999999999999999999999999 46789999999999865
Q ss_pred cccccccccccccCCCCccCccccccccccCC--CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHH-HHHhhccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY-EKISEKKV 234 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~--~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~-~~i~~~~~ 234 (475)
...... ......|+..|+|||.+.+. .++.++||||||+++|+|++|..||...........+ ..+.....
T Consensus 156 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (290)
T cd05613 156 HEDEVE------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 229 (290)
T ss_pred cccccc------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC
Confidence 432211 11235689999999998764 3678999999999999999999999753322222222 11111111
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCC
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPD 266 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 266 (475)
.+...+++.+.+++.+||..+|++||+
T Consensus 230 -----~~~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 230 -----PYPQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred -----CCCccCCHHHHHHHHHHhcCCHHHhcC
Confidence 123457889999999999999999983
No 364
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.6e-35 Score=324.03 Aligned_cols=145 Identities=23% Similarity=0.419 Sum_probs=128.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|+++++||+|+||.||+|.+..+++.||||+++..... ..+..|..++..+++ ++|+.++.++....+.|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h--p~Iv~~~~~~~~~~~~~ 80 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS--PFIVHLYYSLQSANNVY 80 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC--CCcCeEEEEEEECCEEE
Confidence 37899999999999999999999999999999998654321 456778888887765 89999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
|||||+ |++|.+++.. ...+++..++.|+.||+.||.|||.+|||||||||+|||| +..+.+||+|||+++.
T Consensus 81 lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~~ 153 (669)
T cd05610 81 LVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCcc
Confidence 999999 8999999874 3468999999999999999999999999999999999999 4678999999999873
No 365
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.9e-36 Score=291.35 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=199.6
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||.|+||.||+|++..+++.|+||++..... ...+..|..+++.+.| ++++.+..........|++|||+ ++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS--PYVVKLYYSFQGKKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC--cchhHHHHheecCcEEEEEEecCCCC
Confidence 6899999999999988899999998865432 2356777888887764 89999988888899999999999 78
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc-ccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ-HIP 167 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~-~~~ 167 (475)
+|.+++.... .+++..+..++.||+.||.|||++||+|+||+|+||++ +.++.++|+|||++.......... ...
T Consensus 79 ~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 79 DLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCcccccccc
Confidence 9999997543 79999999999999999999999999999999999999 577899999999987654321100 000
Q ss_pred cccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChH
Q 011882 168 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 247 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 247 (475)
........++..|++||.+.+..++.++||||||+++|+|++|..||.... ..+.+..+........ .. ..++.
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~--~~-~~~~~ 228 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET---PEEIFQNILNGKIEWP--ED-VEVSD 228 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCcCCC--cc-ccCCH
Confidence 011234568889999999998889999999999999999999999997643 3333333333222111 11 12489
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 248 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 248 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
.+.+++.+||+.+|++||++..+.++|++-+
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~ 259 (265)
T cd05579 229 EAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259 (265)
T ss_pred HHHHHHHHHhcCCHhhcCCCccHHHHhcCcc
Confidence 9999999999999999999987777777554
No 366
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-37 Score=308.53 Aligned_cols=260 Identities=17% Similarity=0.275 Sum_probs=215.0
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
....+.++||+|-||+|.+|+ ...+..||||+++..... ..+..|+++|..|++ |||+.+.+.|..++..++++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh--PNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH--PNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC--CCeeEEEeeeecCCchHHHH
Confidence 456789999999999999998 355689999998776533 468899999999865 99999999999999999999
Q ss_pred EcC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
||+ .|+|.+++.....+ +..+....|+.||+.||+||.+.+||||||.+.|+|+ +.++++||+|||+++.+-...
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccCC
Confidence 999 99999999865433 4666778899999999999999999999999999999 589999999999999665443
Q ss_pred cccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc--CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
. |+.....+-..+|||+|.+..++++.++|||+||++|||+++ ...||..+.+....+...............
T Consensus 692 y-----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 Y-----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred c-----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec
Confidence 3 233344566789999999999999999999999999999865 789998876654444444443333333333
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
..+.-||.++.+++..||..|-.+||+|++|...|++.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 34466899999999999999999999999999888765
No 367
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.4e-36 Score=292.55 Aligned_cols=245 Identities=23% Similarity=0.294 Sum_probs=195.4
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
+|.+.++||+|+||.||++.+..++..+++|+.+... ...+...|..+++.++| ++++.++.++.+....+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH--PAIVKFHASFLERDAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC--CcHHHHHHHHhcCCceE
Confidence 5999999999999999999998877777777654321 12235567777777765 89999988888888899
Q ss_pred EEEEcC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 81 LVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
+||||+ +++|.+++.. ....+++..++.++.|++.||.|||++||+|+||||+||++. .+.++|+|||+++.
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~ 154 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRL 154 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceee
Confidence 999999 8899988864 235699999999999999999999999999999999999994 35699999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
+..... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||.... .......+......
T Consensus 155 ~~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~- 223 (260)
T cd08222 155 LMGSCD-------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---FLSVVLRIVEGPTP- 223 (260)
T ss_pred cCCCcc-------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHcCCCC-
Confidence 644322 1234568899999999988889999999999999999999999996532 22333333222211
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+...++.++.+++.+||..+|++||++.++++
T Consensus 224 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 ---SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 223467889999999999999999999888853
No 368
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.3e-35 Score=293.63 Aligned_cols=244 Identities=18% Similarity=0.287 Sum_probs=196.0
Q ss_pred EEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 10 ~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
....+||+|+||.||++.+..+++.||||.+..... ...+..|+.+++.+.+ ++++.+..++...+..+++|||+
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH--ENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC--cchhheeeEEEeCCEEEEEEecCC
Confidence 334679999999999999999999999998754332 2346778888887765 89999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 166 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~ 166 (475)
+++|.+++. ...+++..++.++.|++.||+|||++||+|+||||+||++ +.++.++|+|||++........
T Consensus 101 ~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~---- 171 (292)
T cd06657 101 GGALTDIVT--HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVP---- 171 (292)
T ss_pred CCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceecccccc----
Confidence 779988775 3468999999999999999999999999999999999999 4678899999999876543221
Q ss_pred ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCh
Q 011882 167 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 246 (475)
Q Consensus 167 ~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 246 (475)
......|+..|++||.+.+..++.++|||||||++|+|++|..||.+... .+.+..+... ....... ...++
T Consensus 172 ---~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~~~-~~~~~~~-~~~~~ 243 (292)
T cd06657 172 ---RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIRDN-LPPKLKN-LHKVS 243 (292)
T ss_pred ---cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhh-CCcccCC-cccCC
Confidence 11335789999999999888899999999999999999999999976332 2222222211 1111111 24568
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 247 TEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 247 ~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..+.+++.+||..+|.+||++.++++
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 89999999999999999999988754
No 369
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=306.41 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=205.0
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---------chHHHHHHHHHHHHhCCCCCcCeeEEee
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------HPQLQYEAKLYKILQGGSTGIPNLRWFG 73 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---------~~~~~~E~~il~~l~~~~~~i~~l~~~~ 73 (475)
|.++++|-++.+||.|||++||+|.|....+.||||+-..... +....+|..|.+.|.| +.|+++++|+
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH--pRIVKlYDyf 536 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH--PRIVKLYDYF 536 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc--ceeeeeeeee
Confidence 5678899999999999999999999999999999998544332 2335678888888877 7888887776
Q ss_pred E-eCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 74 V-EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 74 ~-~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
. +.+.+|.|+||| |.+|.-+++ ..+-++++++..|+.||+.||.||.+. .|||-||||.||||-.+...|.+||+
T Consensus 537 slDtdsFCTVLEYceGNDLDFYLK-QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 537 SLDTDSFCTVLEYCEGNDLDFYLK-QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred eeccccceeeeeecCCCchhHHHH-hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence 5 678899999999 778877776 455699999999999999999999986 59999999999999877778899999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCC----CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 225 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~----~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~ 225 (475)
||||++.+.+..............+.||.+|++||+|.-. ..+.++||||+|||+|.++.|+.||.......+.-.
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence 9999999988766544444456678999999999998643 368999999999999999999999965322111111
Q ss_pred HHHHhhc-cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 226 YEKISEK-KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 226 ~~~i~~~-~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
...|... .+..+ .-+.++.+.+.+|.+||++.-++|.+..+|
T Consensus 696 eNTIlkAtEVqFP---~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 696 ENTILKATEVQFP---PKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred hhchhcceeccCC---CCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 1111110 00000 013457899999999999999999775444
No 370
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=310.86 Aligned_cols=269 Identities=19% Similarity=0.265 Sum_probs=218.1
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
..+++++..||-||||.|-++........+|+|++++... .+.+..|..|+..+.. +.|++++--+.+..+.|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s--~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS--DFIVRLYRTFRDSKYVY 496 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc--hHHHHHHHHhccchhhh
Confidence 3567888999999999999998654444589998775432 2336678888887764 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+.||-| ||.|+.++.. .+.|+..+...++..+++|++|||.+|||.|||||+|.|| +.+|-+||.|||+|+.+..
T Consensus 497 mLmEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhHHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhcc
Confidence 999999 9999999974 5679999999999999999999999999999999999999 6899999999999998876
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
... +-+++||+.|.|||+++++..+.++|.||||+++|||++|..||.+.+. ...|..|....- .-
T Consensus 573 g~K--------TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp---mktYn~ILkGid---~i 638 (732)
T KOG0614|consen 573 GRK--------TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP---MKTYNLILKGID---KI 638 (732)
T ss_pred CCc--------eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch---HHHHHHHHhhhh---hh
Confidence 432 3468999999999999999999999999999999999999999998554 444444443221 12
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCH--HHHHHHHHHHHHHcCCCCCCcccccccccccccc
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDY--AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQV 301 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~--~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~ 301 (475)
.+++.++....+||.++...+|.+|..+ ..|.++-++ .|..-|||+.++..+.++
T Consensus 639 ~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-------~Wf~gfdweglr~~~L~p 695 (732)
T KOG0614|consen 639 EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-------RWFEGFDWEGLRSRTLPP 695 (732)
T ss_pred hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-------hhhhcCChhhhhhccCCC
Confidence 3446778889999999999999999763 233333333 344568999987765443
No 371
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=299.32 Aligned_cols=274 Identities=21% Similarity=0.253 Sum_probs=221.5
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
-..+|.++.+||+|+||.|.+|..+.+.+.+|||+++.+.. .+--..|.++|.+... .+.++.++..+..-+..
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k-ppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-PPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC-CchHHHHHHHhhhhhhe
Confidence 34679999999999999999999999999999999876532 2234567777765544 48888888888899999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
|+||||+ ||+|--.++.. ++|.+..+..++.+|+-||-+||++|||.||||.+|||| +..+.|||+|||+++.-.
T Consensus 426 yFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENI 501 (683)
T ss_pred eeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccc
Confidence 9999999 99998888754 579999999999999999999999999999999999999 689999999999998643
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
-... ...+++||+.|+|||++.-.+|+..+|+||+||+||||+.|+.||.+. +..+.+..|.+....
T Consensus 502 ~~~~-------TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe---DE~elF~aI~ehnvs--- 568 (683)
T KOG0696|consen 502 FDGV-------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE---DEDELFQAIMEHNVS--- 568 (683)
T ss_pred cCCc-------ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHHccCc---
Confidence 3222 246789999999999999999999999999999999999999999984 445667777776654
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccccccCC
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVST 303 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~ 303 (475)
.++.++.+..+++...|.+.|.+|....---+ +++ .. -.+..-.||+.....+++++-
T Consensus 569 --yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge--~di-~~--H~FFR~iDWek~E~~eiqPPf 626 (683)
T KOG0696|consen 569 --YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGE--RDI-RE--HPFFRRIDWEKLERREIQPPF 626 (683)
T ss_pred --CcccccHHHHHHHHHHhhcCCccccCCCCccc--cch-hh--CcchhhccHHHHhhccCCCCC
Confidence 24678899999999999999999964321100 111 01 133345799988887777654
No 372
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-38 Score=290.60 Aligned_cols=251 Identities=18% Similarity=0.284 Sum_probs=204.4
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+.+-+..||.|+||+|++..++.+|+..|||.+..... ..++..|.+....-... ++|+++++....++..||+||
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~c-p~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNC-PNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCC-cHHHHHhhhhhcCCceeeeHH
Confidence 44556789999999999999999999999998876554 34577777777666555 999999988888888899999
Q ss_pred cCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 85 LLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 85 ~~g~sL~~ll~~~----~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+|.-||..+.++. +..+++..+-.|....+.||.||-. ..||||||||+|||| +..|.|||||||++-.+.+
T Consensus 144 LMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHH
Confidence 9999998887532 4569999999999999999999996 689999999999999 6899999999999987766
Q ss_pred cccccccccccCCCCccCccccccccccC--CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g--~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
+... +.-.|...|||||.+.. ..|+.++||||||++|||++||.+||.+... ..+.+..+..+..+..
T Consensus 221 SiAk--------T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l 290 (361)
T KOG1006|consen 221 SIAK--------TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPIL 290 (361)
T ss_pred HHHh--------hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCee
Confidence 5432 23378899999999864 3489999999999999999999999987543 4444555554444332
Q ss_pred H-HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 238 I-EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 238 ~-~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. ..-+-.++..+..+|..|+.+|-.+||.|.+|++
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 2 1223457889999999999999999999998864
No 373
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.6e-35 Score=295.04 Aligned_cols=255 Identities=18% Similarity=0.229 Sum_probs=188.0
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
|.+++.+|.| |.||.+++..+++.||||+++... ....+..|+.++..++| ++++.++.++...+..+++||
T Consensus 4 ~~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~~i~~~~~~~~~~~~~~~~~e 79 (314)
T cd08216 4 TLIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQH--PNILPYVTSFIVDSELYVVSP 79 (314)
T ss_pred hhhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCC--cchhhhhheeecCCeEEEEEe
Confidence 3344444444 555666666799999999986542 12357888999988875 899999888888999999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 85 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 85 ~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+ +++|.+++... ...+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|||.+..+.....
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~ 156 (314)
T cd08216 80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGK 156 (314)
T ss_pred ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeeccccc
Confidence 99 78999998753 34689999999999999999999999999999999999994 678999999999986644322
Q ss_pred ccccccccCCCCccCccccccccccCC--CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------- 233 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~--~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------- 233 (475)
.............++..|+|||++.+. .++.++|||||||++|||++|..||...... .....++....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (314)
T cd08216 157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKS 234 (314)
T ss_pred cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccC
Confidence 111111122345678899999998763 4789999999999999999999999864321 11111111000
Q ss_pred --------c-------------cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 234 --------V-------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 234 --------~-------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
. ..........++.++.+++.+||..||++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 00000111233568899999999999999999887743
No 374
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.5e-36 Score=284.11 Aligned_cols=265 Identities=19% Similarity=0.230 Sum_probs=201.1
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCC----eEEEEEEeccCC----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEe-C
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLENVKT----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVE-G 76 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~----~~vAvKi~~~~~----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~-~ 76 (475)
...|+++++||+|.||.||+|..++++ +.+|||.++... ......+|+.+++.++| +|++.+..++.. +
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h--~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKH--PNVISLVKVFLSHD 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcC--CcchhHHHHHhccC
Confidence 357999999999999999999766554 378999887663 34568899999999998 788877555444 8
Q ss_pred CEEEEEEEcCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEee-CCCCCcEEEeec
Q 011882 77 DYNVLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL-GRRANQVYIIDF 151 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~-~~~~~~vkL~DF 151 (475)
...++++||...+|.++|+... +.++...+..|+.||+.|+.|||++=|+||||||.||||.- +...|.|||+||
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 8899999999999999998653 34899999999999999999999999999999999999952 234589999999
Q ss_pred CCcccccccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCC---------C
Q 011882 152 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAG---------T 221 (475)
Q Consensus 152 GlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~---------~ 221 (475)
|+|+.+.++-. |......++-|.+|.|||.++|.. |+.+.|||++|||+.||++-+.-|.+.... +
T Consensus 181 GlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 181 GLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred cHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 99999876543 333445667899999999999875 899999999999999999988888763221 1
Q ss_pred HHHHHHHHhhcc----------ccc---cHHHH----------------hcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 222 KKQKYEKISEKK----------VST---SIEAL----------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 222 ~~~~~~~i~~~~----------~~~---~~~~l----------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
...++.++.... ++. .+..+ .+.-++...+|+.++|..||-+|.|+.+.
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA-- 334 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA-- 334 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH--
Confidence 111222211100 000 00000 01124457899999999999999998766
Q ss_pred HHHHHHH
Q 011882 273 LFRDLFI 279 (475)
Q Consensus 273 ~L~~l~~ 279 (475)
|++.+.
T Consensus 335 -leh~yF 340 (438)
T KOG0666|consen 335 -LEHPYF 340 (438)
T ss_pred -hccccc
Confidence 555443
No 375
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=314.13 Aligned_cols=257 Identities=16% Similarity=0.257 Sum_probs=215.7
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCC---eEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTN---EEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~---~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
...+|.++||.|.||+||+|+-+..+ ..||||.++..... .+|..|+.|+-++.| |||+++.++........
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH--PNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH--PNIIRLEGVVTKSKPVM 706 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC--CcEEEEEEEEecCceeE
Confidence 45789999999999999999987666 47999999876543 358889999988776 99999999999999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|+.||| .++|+.++....+.|+..++.-+++.|+.||.||-+.++|||||-..|||| +.+-.+|++||||++.+.+
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeeccc
Confidence 999999 999999999888889999999999999999999999999999999999999 6888999999999998766
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
+.... | ......=..+|.|||.+.-..++.++||||||++|||.+. |..||.++.. .+.+..|.+.-..++
T Consensus 784 d~~~~---y-tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN---QdVIkaIe~gyRLPp- 855 (996)
T KOG0196|consen 784 DPEAA---Y-TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKAIEQGYRLPP- 855 (996)
T ss_pred CCCcc---c-cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---HHHHHHHHhccCCCC-
Confidence 54211 1 1111112478999999999999999999999999999887 9999988654 333344433222111
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
+-+||..|..|+..||++|-.+||.|.+|+..|++++.
T Consensus 856 ---PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 856 ---PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ---CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 25789999999999999999999999999999999874
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-36 Score=261.52 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=208.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
.+|.-.++||+|.||+||+|++..+++.||+|.+..+... ....+|+-+++.++| .||++++.....+....+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh--knivrl~dvlhsdkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH--KNIVRLHDVLHSDKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh--cceeehhhhhccCceeEEe
Confidence 3577789999999999999999999999999988766543 357899999999998 8999999999999999999
Q ss_pred EEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 83 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 83 me~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
+|||..+|..++..+++.++.+.+..++.|++.||.|+|+++++||||||+|.|| +.++.+||+|||+|+.+.-+.
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipv- 155 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV- 155 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce-
Confidence 9999999999999999999999999999999999999999999999999999999 689999999999999775432
Q ss_pred ccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccc-----
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS----- 235 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~----- 235 (475)
+.-...+-|.+|.+|.++.|.. |+...|+||.|||+.|+.. |...|.+.+..+...++.+.......
T Consensus 156 ------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred ------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCc
Confidence 2334456799999999999877 7999999999999999997 77888886554444444443321111
Q ss_pred ----------------ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 236 ----------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 236 ----------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
.....+...+...=++++++.+.-+|..|.++++.
T Consensus 230 ~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaa 280 (292)
T KOG0662|consen 230 MTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAA 280 (292)
T ss_pred cccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHH
Confidence 11112222334455789999999999999997765
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=305.60 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=200.2
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
..+.|++...||.|+|+.|-.+.+..+++..++|++... ..+...|..++..... |++++.+...+.++...|+|||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~-h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRD-HPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcC-CCcceeecceecCCceeeeeeh
Confidence 457899999999999999999999999999999998765 3455667777766655 4999999999999999999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 85 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 85 ~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
++ |+-|.+.+.. .+....++..|+.||+.|+.|||++|||||||||+|||+. ++.++++|+|||.++.....-
T Consensus 397 ~l~g~ell~ri~~--~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~~-- 470 (612)
T KOG0603|consen 397 LLDGGELLRRIRS--KPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERSC-- 470 (612)
T ss_pred hccccHHHHHHHh--cchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchhh--
Confidence 99 5555554432 2333378888999999999999999999999999999994 478899999999998776541
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
.+-+=|..|.|||+....+|+.++||||||++||+||+|+.||..-... .+.+..+...+.. .
T Consensus 471 --------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~~~~s-------~ 533 (612)
T KOG0603|consen 471 --------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQMPKFS-------E 533 (612)
T ss_pred --------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcCCccc-------c
Confidence 1235688999999999999999999999999999999999999874433 4455555544433 5
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.++.+.++|+.+||+.||.+||++.++.
T Consensus 534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~ 561 (612)
T KOG0603|consen 534 CVSDEAKDLLQQLLQVDPALRLGADEIG 561 (612)
T ss_pred ccCHHHHHHHHHhccCChhhCcChhhhc
Confidence 6789999999999999999999998874
No 378
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-34 Score=278.30 Aligned_cols=234 Identities=23% Similarity=0.299 Sum_probs=194.0
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCC-----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
||.|+||.||++.+..+++.||+|++..... ...+..|+.+++.+.+ ++++.++..+..+...+++||++ ++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH--PFIVKLHYAFQTEEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC--CcHHHHHHHeecCCeeEEEEecCCCC
Confidence 6999999999999988899999998765432 2357788888888874 89999988888999999999999 99
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 168 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~ 168 (475)
+|.+++... ..+++..+..++.||+.||.|||+.+++|+||||+||++ +..+.++|+|||++........
T Consensus 79 ~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~------ 148 (250)
T cd05123 79 ELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGS------ 148 (250)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccCCC------
Confidence 999998743 468999999999999999999999999999999999999 4678899999999987644321
Q ss_pred ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHH
Q 011882 169 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 248 (475)
Q Consensus 169 ~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 248 (475)
......++..|++||.+.+...+.++|+||||+++|+|++|..||.... ..+.+..+..... .+...++.+
T Consensus 149 -~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~ 219 (250)
T cd05123 149 -RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED---RKEIYEKILKDPL-----RFPEFLSPE 219 (250)
T ss_pred -cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCCHH
Confidence 1234578999999999998888999999999999999999999996532 2333333333221 233456899
Q ss_pred HHHHHHHHhcCCCCCCCCHHH
Q 011882 249 FASYFHYCRSLRFDDKPDYAY 269 (475)
Q Consensus 249 l~~li~~cl~~dp~~RPt~~~ 269 (475)
+.+++.+||..||++||++.+
T Consensus 220 l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHhcCCHhhCCCccc
Confidence 999999999999999999855
No 379
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.2e-34 Score=310.41 Aligned_cols=249 Identities=18% Similarity=0.191 Sum_probs=167.3
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccC----CeEEEEEEeccCCCchHHHHHHHHHHHHhCCC-CCcCe-eEE----e-eE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQT----NEEVAIKLENVKTKHPQLQYEAKLYKILQGGS-TGIPN-LRW----F-GV 74 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~----~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~-~~i~~-l~~----~-~~ 74 (475)
.++|++.++||+|+||.||+|.+..+ +..||||.+...... |..+...+.+.. ..+.. +.. . ..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNERVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHHHHHhhchhhHHHHHHhhhcccccc
Confidence 46899999999999999999999888 899999986543221 111222222110 11111 111 1 24
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHHcCCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNFCSRK-------------------LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDN 134 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~~~~~-------------------ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~N 134 (475)
.....++||||+ +++|.+++...... .....+..|+.||+.||+|||+++||||||||+|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 566789999999 78999988643211 1234567899999999999999999999999999
Q ss_pred EEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCC----------------------CC
Q 011882 135 FLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE----------------------QS 192 (475)
Q Consensus 135 ILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~----------------------~s 192 (475)
|||+ ++.+.+||+|||+|+.+...... ....+.||+.|+|||++.... ++
T Consensus 286 ILl~--~~~~~~KL~DFGlA~~l~~~~~~------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 286 IIFS--EGSGSFKIIDLGAAADLRVGINY------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred EEEe--CCCCcEEEEeCCCcccccccccc------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 9995 34578999999999865433221 124568899999999764322 34
Q ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-------------ccccHH---HHhcCChHHHHHHHHHH
Q 011882 193 RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-------------VSTSIE---ALCRGYPTEFASYFHYC 256 (475)
Q Consensus 193 ~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~-------------~~~~~~---~l~~~~p~~l~~li~~c 256 (475)
.++|||||||+||||+++.+|+... ..+....+.... ...... .+........++||.+|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSN----LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchH----HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence 5679999999999999988776431 111111111100 000000 00111233456899999
Q ss_pred hcCCCCCCCCHHHHH
Q 011882 257 RSLRFDDKPDYAYLK 271 (475)
Q Consensus 257 l~~dp~~RPt~~~l~ 271 (475)
|..||++||++.+++
T Consensus 434 L~~dP~kR~ta~e~L 448 (566)
T PLN03225 434 MRFKGRQRISAKAAL 448 (566)
T ss_pred ccCCcccCCCHHHHh
Confidence 999999999988774
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=303.53 Aligned_cols=251 Identities=20% Similarity=0.357 Sum_probs=208.9
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-chHHHHHHHHHHHHhCCCCCcCeeEEeeE-----eCCE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGSTGIPNLRWFGV-----EGDY 78 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-~~~~~~E~~il~~l~~~~~~i~~l~~~~~-----~~~~ 78 (475)
-.+.|+|++.||.|.+|.||+++++.+++.+||||...... .++++.|..+++.+.++ +|++.+++++. .++.
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h-pnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH-PNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC-CCcceEEEEEEEecCCCCCe
Confidence 35679999999999999999999999999999999876654 45688888899888775 89998887775 4578
Q ss_pred EEEEEEcC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 79 NVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 79 ~~lvme~~-g~sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
.||||||| |||.-|+++.. +.++.+..+..|+..++.||.+||...+||||||-.|||++ .++.|||+|||++..
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQ 172 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeeeeeee
Confidence 99999999 89999999754 45699999999999999999999999999999999999995 789999999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccCCC-----CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-----~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
+..... ...+++||+.|||||++...+ |+.++|+||||++..||..|.+|+.++... ..+..|..
T Consensus 173 ldsT~g-------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm---raLF~IpR 242 (953)
T KOG0587|consen 173 LDSTVG-------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPR 242 (953)
T ss_pred eecccc-------cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh---hhhccCCC
Confidence 766443 346789999999999997654 688999999999999999999999886542 23333333
Q ss_pred ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 232 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 232 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
...+.. .-++....+|.++|..||.+|++.||+..+++
T Consensus 243 NPPPkL--krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll 280 (953)
T KOG0587|consen 243 NPPPKL--KRPKKWSKKFNDFISTCLVKDYEQRPSTEELL 280 (953)
T ss_pred CCCccc--cchhhHHHHHHHHHHHHHhhccccCcchhhhc
Confidence 222221 11345678999999999999999999976653
No 381
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-35 Score=318.99 Aligned_cols=256 Identities=21% Similarity=0.236 Sum_probs=187.1
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeE-------
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGV------- 74 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~------- 74 (475)
..++|+.++.||+||||.||+++++-+|+.||||.+..... ...+.+|++++..|+| +|++.++..+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH--pNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH--PNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC--cceeeeehhhhccCCccc
Confidence 45789999999999999999999999999999998876642 2347889999999987 77765531100
Q ss_pred --------------------------------------------------------------------------------
Q 011882 75 -------------------------------------------------------------------------------- 74 (475)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (475)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------eC-------CEEEEEEEcCCCCHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHHHH
Q 011882 75 -------------------------EG-------DYNVLVIDLLGPSLEDLFNFCSRKL-SLKTVLMLADQMINRVEFVH 121 (475)
Q Consensus 75 -------------------------~~-------~~~~lvme~~g~sL~~ll~~~~~~l-s~~~~~~i~~qi~~aL~yLH 121 (475)
+. .+.||-||||..+|...+...+... .....+++++||++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 00 2458999999555544443233222 47789999999999999999
Q ss_pred hCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc---cc-------ccccc-cccccCCCCccCccccccccccCCC
Q 011882 122 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR---DT-------ATHQH-IPYRENKNLTGTARYASMNTHLGIE 190 (475)
Q Consensus 122 ~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~---~~-------~~~~~-~~~~~~~~~~GT~~Y~APE~~~g~~ 190 (475)
++|||||||||.||+| +..+.|||+|||+|+... .. .+... ...-..+..+||..|+|||++.+..
T Consensus 715 ~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 9999999999999999 588999999999998722 00 00000 1111235678999999999998765
Q ss_pred ---CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 191 ---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 191 ---~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
|+.|+|+||||+||+||+. ||.. .......+..+.....+.+ +.+...--+.-..+|+.|++.||.+||++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA 865 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTA 865 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCH
Confidence 9999999999999999985 5643 1222333333333333332 22222223456789999999999999999
Q ss_pred HHHH
Q 011882 268 AYLK 271 (475)
Q Consensus 268 ~~l~ 271 (475)
.+|+
T Consensus 866 ~eLL 869 (1351)
T KOG1035|consen 866 TELL 869 (1351)
T ss_pred HHHh
Confidence 8875
No 382
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=281.88 Aligned_cols=273 Identities=20% Similarity=0.282 Sum_probs=217.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-----CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-----~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.++|.++++||.|+|..|.+++.++|.+.||+|+++++- .-+-.+.|..+.....+. |.++-++.++..+...+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~-pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNN-PFLVGLHSCFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCC-CeEEehhhhhcccceEE
Confidence 478999999999999999999999999999999876543 223467788888776654 88888888888999999
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+|.||. |++|--.++ ..++++++.+..+...|+.||.|||++|||.||||.+|+|| +..+.+||+|+|+++.-..
T Consensus 328 fvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCC
Confidence 999999 888876666 45689999999999999999999999999999999999999 6899999999999986544
Q ss_pred cccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCC-----CCCHHHHHHHHhhccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK-----AGTKKQKYEKISEKKV 234 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~-----~~~~~~~~~~i~~~~~ 234 (475)
+.. ...+++||+.|.|||++.|.+|+..+|+|+|||+|+||+.|+.||.-.. ..+....++.|.++..
T Consensus 404 ~gd-------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi 476 (593)
T KOG0695|consen 404 PGD-------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI 476 (593)
T ss_pred CCc-------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc
Confidence 333 3467999999999999999999999999999999999999999997432 2233444555666554
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccccc
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQS 299 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~ 299 (475)
. ++..++-....+++.-|.+||.+|....- .--|.++ .+.++..-.||+.+..+|.
T Consensus 477 r-----iprslsvkas~vlkgflnkdp~erlgc~~-~~g~~di---k~h~ffr~idwd~leqk~v 532 (593)
T KOG0695|consen 477 R-----IPRSLSVKASHVLKGFLNKDPKERLGCRP-QTGFSDI---KSHAFFRSIDWDLLEQKQV 532 (593)
T ss_pred c-----ccceeehhhHHHHHHhhcCCcHHhcCCCc-ccchhhh---hcchhhhhCCHHHHhhccc
Confidence 3 23556677788999999999999854221 0022222 2234444679998765543
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.6e-34 Score=276.80 Aligned_cols=220 Identities=17% Similarity=0.178 Sum_probs=176.9
Q ss_pred eCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHH
Q 011882 18 GSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNF 96 (475)
Q Consensus 18 G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~ 96 (475)
|.||.||++.+..+++.||+|.+..... ...|... .+...+++++.++.++...+..+++|||+ |++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---YSRERLT--IIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh---hhhHHHH--HHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8999999999999999999998865432 2333332 33445699999999999999999999999 7899998864
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCcc
Q 011882 97 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 176 (475)
Q Consensus 97 ~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~G 176 (475)
. ..+++..+..++.|++.||+|||++||+||||||+||++ +.++.++|+|||++..+.... ....+
T Consensus 79 ~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~~----------~~~~~ 144 (237)
T cd05576 79 F-LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDSC----------DGEAV 144 (237)
T ss_pred h-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhcccccc----------ccCCc
Confidence 3 469999999999999999999999999999999999999 467889999999887654321 12356
Q ss_pred CccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHH
Q 011882 177 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYC 256 (475)
Q Consensus 177 T~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~c 256 (475)
+..|+|||.+.+..++.++|||||||++|||++|..||...... +.. ... ..+...++..+.++|.+|
T Consensus 145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------~~~-~~~---~~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------INT-HTT---LNIPEWVSEEARSLLQQL 212 (237)
T ss_pred CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------ccc-ccc---cCCcccCCHHHHHHHHHH
Confidence 77899999998888999999999999999999999887542211 000 000 012345788999999999
Q ss_pred hcCCCCCCCCHH
Q 011882 257 RSLRFDDKPDYA 268 (475)
Q Consensus 257 l~~dp~~RPt~~ 268 (475)
|+.||++||++.
T Consensus 213 l~~dp~~R~~~~ 224 (237)
T cd05576 213 LQFNPTERLGAG 224 (237)
T ss_pred ccCCHHHhcCCC
Confidence 999999999963
No 384
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=286.00 Aligned_cols=259 Identities=22% Similarity=0.310 Sum_probs=203.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC----EEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD----YNVLV 82 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~----~~~lv 82 (475)
...++.++||+|.||.||+|. -+++.||||++... ....++.|..|+....-.|+||+.+........ ..+||
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~-~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQ-EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHH-HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 346788999999999999998 56799999998755 456789999999998888899999988877555 78999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---------CCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---------KSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~---------~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
++|. .|+|.++++ ...+++....+|+..|++||+|||+ ..|+|||||..|||| ..+.++.|+|||
T Consensus 287 t~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaDFG 361 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIADFG 361 (534)
T ss_pred eeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeeccc
Confidence 9999 999999998 4579999999999999999999996 259999999999999 588999999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCCC-CC-----CchhHHHHHHHHHHHHcCC------------CCC
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QS-----RRDDLESLGYVLMYFLRGS------------LPW 214 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s-----~ksDIwSlG~iL~elltG~------------~Pf 214 (475)
||..+...... .....-+||.+|||||++.|.- +. .+.||||+|.|||||++.. +||
T Consensus 362 LAl~~~p~~~~-----~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 362 LALRLEPGKPQ-----GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeEEecCCCCC-----cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 99988743321 1223468999999999998753 22 4689999999999999752 333
Q ss_pred CC-C-CCCCHHHHHHHHhhccccccHHHHhc--CChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 215 QG-L-KAGTKKQKYEKISEKKVSTSIEALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 215 ~~-~-~~~~~~~~~~~i~~~~~~~~~~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
+. . ...+..+....+..++..+.++.... ....-+.+.++.||..|++.|.|+.-+.+.+.++.
T Consensus 437 e~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 437 EAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred hHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 31 0 11122333333444444444333332 23567999999999999999999999988888774
No 385
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-34 Score=280.81 Aligned_cols=265 Identities=22% Similarity=0.306 Sum_probs=210.5
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC----CEE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG----DYN 79 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~----~~~ 79 (475)
.|..+..+.+.||+|.||+||+|.| .|+.||||++... +.....+|.+|++-.--.|+||..+......+ ...
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr-dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR-DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc-chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 4678899999999999999999997 5899999998754 55678899999998777779998887766533 357
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCCCcEEEeeCCCCCcEEEee
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK--------SFLHRDIKPDNFLMGLGRRANQVYIID 150 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~--------gIvHrDIKP~NILl~~~~~~~~vkL~D 150 (475)
+||.+|. .|||.|+++. ..++.+..++++..++.||++||.. .|.|||||..|||| .+++.+.|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~IAD 359 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIAD 359 (513)
T ss_pred EEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEEee
Confidence 9999999 9999999984 6799999999999999999999952 49999999999999 6899999999
Q ss_pred cCCcccccccccccccccccCCCCccCccccccccccCCC------CCCchhHHHHHHHHHHHHcC----------CCCC
Q 011882 151 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE------QSRRDDLESLGYVLMYFLRG----------SLPW 214 (475)
Q Consensus 151 FGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~------~s~ksDIwSlG~iL~elltG----------~~Pf 214 (475)
+|||...........++ .+..+||.+|||||++...- .-..+||||||.||||++.. ++||
T Consensus 360 LGLAv~h~~~t~~idi~---~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIP---PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred ceeeEEecccCCcccCC---CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 99998877654433332 35679999999999986432 13478999999999999852 6899
Q ss_pred CCCCCCC--HHHHHHHHhhccccccHHHHhcCCh--HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 215 QGLKAGT--KKQKYEKISEKKVSTSIEALCRGYP--TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 215 ~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~p--~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
.+.-+.+ ..+..+-+--.+..+.++..+...| ..+.++++.||..+|.-|-++--|.+.|.++.+
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 8764433 2222222223344444444444443 468899999999999999999999999888863
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-36 Score=275.44 Aligned_cols=259 Identities=21% Similarity=0.251 Sum_probs=199.3
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeE------
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGV------ 74 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~------ 74 (475)
..+.|+-..+||+|.||+||+|+.+.+|+.||+|++-.+ .......+|++++..|+| ++++.+...+.
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkH--env~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKH--ENVVNLIEICRTKATPT 92 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcc--hhHHHHHHHHhhccCCc
Confidence 456788899999999999999999999999999854322 123457889999999988 77777654432
Q ss_pred --eCCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 75 --EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 75 --~~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
+....|+||++|..+|..++.....+|+..++.+++.+++.||.|+|...|+|||+||+|+|| +.++.+||+|||
T Consensus 93 ~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFG 169 (376)
T KOG0669|consen 93 NRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFG 169 (376)
T ss_pred ccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccc
Confidence 233479999999999999998777789999999999999999999999999999999999999 578999999999
Q ss_pred CcccccccccccccccccCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011882 153 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 153 lA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
+|+.+........-.| .+.+-|.+|.+||.++|. +|+++.|||..||||.||++|++-+++.........+..+..
T Consensus 170 lar~fs~~~n~~kpry---tnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRY---TNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred cccceecccccCCCCc---ccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 9998876544322211 344669999999999986 589999999999999999999999988543222222211110
Q ss_pred ---cccccc----------------------HHHHhc--CChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 232 ---KKVSTS----------------------IEALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 232 ---~~~~~~----------------------~~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
+...+. ++...+ .-.++..+|+.+++.+||.+|+++++++
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 000000 000111 1134678999999999999999998874
No 387
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=303.62 Aligned_cols=257 Identities=21% Similarity=0.334 Sum_probs=206.8
Q ss_pred ceEEeeeEeeeCceeEEEEEEcc-------CCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGD 77 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~-------~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~ 77 (475)
+.++.+.||+|.||.|++|.-.. ....||||.++..... ..+..|.++++.+..+ +|++.+.+.+....
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H-~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKH-PNIVNLLGACTQDG 375 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCC-cchhhheeeeccCC
Confidence 44677799999999999997431 1457999988765544 5688899999988764 99999999999999
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 141 (475)
..++|+||+ .|+|.+++..++ ..++..+++.++.||+.|++||+++.+|||||-..|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~--- 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT--- 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec---
Confidence 999999999 899999998665 2489999999999999999999999999999999999995
Q ss_pred CCCcEEEeecCCcccccccccccccccccCCCCcc--CccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCC
Q 011882 142 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG--TARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLK 218 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~G--T~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~ 218 (475)
.+..+||+|||+|+....... |. .....| ...|||||.+....|+.++||||||++|||+++ |..||.+..
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~-----y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDY-----YR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred CCCEEEEccccceeccCCCCc-----eE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 678999999999986444322 11 111122 345999999999999999999999999999998 999998743
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 219 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
.. ...++.+..+.. ...+..|+.++.+++..||..+|++||++.++.+.|..++..
T Consensus 527 ~~--~~l~~~l~~G~r----~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 527 PT--EELLEFLKEGNR----MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred cH--HHHHHHHhcCCC----CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 21 222333332222 122356789999999999999999999999999999997654
No 388
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-34 Score=290.47 Aligned_cols=274 Identities=22% Similarity=0.262 Sum_probs=205.7
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
.-|..++.||-|+||+|.++....|...||+|.+.+.+.. .....|..||..... +-+++|++.+.+.+..|+
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn--~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN--EWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC--cceEEEEEEeccCCceEE
Confidence 3488999999999999999998889999999987654321 235668888876665 788999999999999999
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
||||+ ||++-.|+-. -+-|.+..+..++.++..|+++.|..|+|||||||+|||| |.+|.|||+|||||+-+.-.
T Consensus 707 VMdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceec
Confidence 99999 9999998874 3579999999999999999999999999999999999999 68999999999999866422
Q ss_pred cccc------cc------c---------------c--------ccCCCCccCccccccccccCCCCCCchhHHHHHHHHH
Q 011882 161 ATHQ------HI------P---------------Y--------RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM 205 (475)
Q Consensus 161 ~~~~------~~------~---------------~--------~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ 205 (475)
.... |. + . .....++||+.|+|||++....|+..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 1100 00 0 0 0123468999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 011882 206 YFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQF 285 (475)
Q Consensus 206 elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~ 285 (475)
||+.|+.||-.........++...... +. -..|.+++.+..++|.++. -++++|..-. ..+.+ ..-.|
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~-l~---~~~~~~ls~e~~~li~kLc-~sad~RLGkn-g~d~v------KaHpf 930 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNF-LH---IPYQGNLSKEALDLIQKLC-CSADSRLGKN-GADQV------KAHPF 930 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhc-cc---cccccccCHHHHHHHHHHh-cChhhhhccc-chhhh------hcCcc
Confidence 999999999876554433332221110 00 1124667888888888754 3577775421 11111 12345
Q ss_pred CCccccccccccc
Q 011882 286 DYVFDWTILKYQQ 298 (475)
Q Consensus 286 ~~~~dw~~~~~~~ 298 (475)
....||..+..+.
T Consensus 931 FkgIDfsslRkq~ 943 (1034)
T KOG0608|consen 931 FKGIDFSSLRKQR 943 (1034)
T ss_pred ccccchHhhhhcc
Confidence 5667888754443
No 389
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3e-33 Score=319.47 Aligned_cols=249 Identities=15% Similarity=0.172 Sum_probs=189.2
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL- 86 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~- 86 (475)
.|...+.||+|+||.||+|.+..++..||||.++.... ....|+++++.++| ++|+.+++++...+..|+||||+
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~H--pnIv~~~~~~~~~~~~~lv~Ey~~ 766 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQH--PNIVKLIGLCRSEKGAYLIHEYIE 766 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCC--CCcceEEEEEEcCCCCEEEEeCCC
Confidence 45667889999999999999989999999998764332 23456777777754 99999999999999999999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc
Q 011882 87 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 163 (475)
Q Consensus 87 g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~ 163 (475)
+++|.+++. .+++..+..|+.||+.||+||| +.+|+||||||+||++ +..+..++. ||.+......
T Consensus 767 ~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~~~~~--- 835 (968)
T PLN00113 767 GKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGLLCTD--- 835 (968)
T ss_pred CCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccccccC---
Confidence 899999986 4899999999999999999999 6799999999999999 455566654 6665433211
Q ss_pred cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC--CHHHHHHHHhhc-cc----cc
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--TKKQKYEKISEK-KV----ST 236 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~--~~~~~~~~i~~~-~~----~~ 236 (475)
....||..|+|||++.+..++.++|||||||++|||++|+.||...... ...+........ .. ..
T Consensus 836 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (968)
T PLN00113 836 --------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907 (968)
T ss_pred --------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCc
Confidence 1236889999999999999999999999999999999999999643211 111111100000 00 00
Q ss_pred cHH---HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 237 SIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 237 ~~~---~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
.+. ........++.+++.+||+.||++||++.++++.|+++..
T Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred cccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 000 0000112467889999999999999999999999988754
No 390
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-33 Score=274.81 Aligned_cols=136 Identities=25% Similarity=0.428 Sum_probs=115.7
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-CchHHHHHHHHHHHHhCCC------CCcCeeEEeeE-
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGS------TGIPNLRWFGV- 74 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~~~~~E~~il~~l~~~~------~~i~~l~~~~~- 74 (475)
+..+++|.+.++||.|.|++||+|.|..+.+.||+|+.+... ..+....|+++|+.+.... .+|+++++.+.
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 445689999999999999999999999999999999986543 3355788999999987654 34566655543
Q ss_pred ---eCCEEEEEEEcCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEe
Q 011882 75 ---EGDYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMG 138 (475)
Q Consensus 75 ---~~~~~~lvme~~g~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~ 138 (475)
.+...|||+|++|.+|..+|.+.. +.++...+..|++||+.||.|||. .||||-||||+||||.
T Consensus 154 sGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred cCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 567899999999999999998765 349999999999999999999996 7999999999999994
No 391
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.2e-34 Score=287.21 Aligned_cols=206 Identities=23% Similarity=0.295 Sum_probs=177.2
Q ss_pred ccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-CCchHHHHHHHHHHHHhCCC----CCcCeeEEeeEeCCE
Q 011882 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGGS----TGIPNLRWFGVEGDY 78 (475)
Q Consensus 4 ~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-~~~~~~~~E~~il~~l~~~~----~~i~~l~~~~~~~~~ 78 (475)
.+.++|.+....|+|-|++|..|.+..-|+.|||||+... .++..=..|++||+.|+... .|++.++-.+...+.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 5788999999999999999999999999999999998654 34566788999999998632 345666666777889
Q ss_pred EEEEEEcCCCCHHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 79 NVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 79 ~~lvme~~g~sL~~ll~~~~~~--ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
.|||+|.+..+|.++++..+.. |....+..++.|+..||..|-.+||+|.||||+||||. .....+||||||.|..
T Consensus 509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFGSASF 586 (752)
T ss_pred eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCccccc
Confidence 9999999999999999877655 78899999999999999999999999999999999996 4567899999999987
Q ss_pred ccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011882 157 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 220 (475)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~ 220 (475)
..+... .| +.-+..|.|||+++|.+|+...|+||+||+||||.||+..|.|.+..
T Consensus 587 ~~enei---tP------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 587 ASENEI---TP------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred cccccc---cH------HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 655332 22 34567899999999999999999999999999999999999885543
No 392
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=294.59 Aligned_cols=255 Identities=21% Similarity=0.273 Sum_probs=211.0
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCe----EEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~----~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
.+..++||+|+||+||+|.|...|+ +||||++..... ..++..|+-++..+.| +|++++.+++.... .-|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldH--pnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDH--PNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCC--chHHHHhhhcccch-HHH
Confidence 4567899999999999999987665 689998765443 3567888888887776 99999998887666 678
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|.+|+ +|+|.++++..+.++-.+..+.|..||++||.|||++++|||||-..|||| .....+||.|||+|+.+...
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCcc
Confidence 88898 999999999888899999999999999999999999999999999999999 58889999999999987765
Q ss_pred ccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
...-+. ....-.+.|||-|.+....|+.++|||||||++||++| |..||++....+....+++... +
T Consensus 852 ~~ey~~-----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR--L----- 919 (1177)
T KOG1025|consen 852 EKEYSA-----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER--L----- 919 (1177)
T ss_pred cccccc-----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc--C-----
Confidence 442221 11223567999999999999999999999999999998 9999999766554444433222 1
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
..+..++.+++-++.+||..|++.||+|+++...|.++...-
T Consensus 920 sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 920 SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 122457889999999999999999999999999998876443
No 393
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=5.4e-32 Score=256.77 Aligned_cols=236 Identities=25% Similarity=0.341 Sum_probs=191.2
Q ss_pred CceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHH
Q 011882 19 SFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLF 94 (475)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll 94 (475)
+||.||+|.+..+++.||+|++..... ...+..|.+.++.+++ ++++.+..++......+++||++ +++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH--PNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC--CcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 689999999988899999999876554 4578889998888844 89999999988889999999999 44999998
Q ss_pred HHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCC
Q 011882 95 NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNL 174 (475)
Q Consensus 95 ~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~ 174 (475)
.... .++...++.++.+++.+|.|||+.+|+|+||+|.||+++ ..+.++|+|||++........ ....
T Consensus 79 ~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~--------~~~~ 146 (244)
T smart00220 79 KKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGL--------LTTF 146 (244)
T ss_pred Hhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccc--------cccc
Confidence 7533 389999999999999999999999999999999999994 668999999999987654321 2345
Q ss_pred ccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHH
Q 011882 175 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFH 254 (475)
Q Consensus 175 ~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~ 254 (475)
.++..|++||.+.+..++.++||||||+++|+|++|..||..... ....+..+....... ......++.++.+++.
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~ 222 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIGKPKPPF--PPPEWKISPEAKDLIR 222 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhccCCCC--ccccccCCHHHHHHHH
Confidence 788899999999988899999999999999999999999976321 122222222222111 1111117889999999
Q ss_pred HHhcCCCCCCCCHHHHHH
Q 011882 255 YCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 255 ~cl~~dp~~RPt~~~l~~ 272 (475)
+||..+|++||++.++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHccCCchhccCHHHHhh
Confidence 999999999999988864
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=294.74 Aligned_cols=246 Identities=20% Similarity=0.229 Sum_probs=189.5
Q ss_pred EeeeEeeeCce-eEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcCCCC
Q 011882 11 LGRKIGSGSFG-EIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLLGPS 89 (475)
Q Consensus 11 l~~~LG~G~fG-~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~g~s 89 (475)
-.+.+|.|+.| .||+|. ..|+.||||.+-. ......++|+.+++.... |+||+++++...+..+.||+.|+|.++
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~-e~~~~A~rEi~lL~eSD~-H~NviRyyc~E~d~qF~YIalELC~~s 588 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGV--YEGREVAVKRLLE-EFFDFAQREIQLLQESDE-HPNVIRYYCSEQDRQFLYIALELCACS 588 (903)
T ss_pred cHHHcccCCCCcEEEEEe--eCCceehHHHHhh-HhHHHHHHHHHHHHhccC-CCceEEEEeeccCCceEEEEehHhhhh
Confidence 34678899988 679998 5789999996532 234567889999987765 499999988888999999999999999
Q ss_pred HHHHHHHcCCC---CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC--CCCcEEEeecCCccccccccccc
Q 011882 90 LEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 90 L~~ll~~~~~~---ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
|+++++..... ......+.++.|++.||++||+.+||||||||+||||...+ ....++|+|||+++.+.....
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s-- 666 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS-- 666 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc--
Confidence 99999853111 11245678899999999999999999999999999997542 335789999999998865433
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcC-CCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 243 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 243 (475)
.++...+..||-.|+|||++.....+.++|||||||++|+.++| .+||... .+.-..|......- ..+..
T Consensus 667 --S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~-----~~R~~NIl~~~~~L--~~L~~ 737 (903)
T KOG1027|consen 667 --SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS-----LERQANILTGNYTL--VHLEP 737 (903)
T ss_pred --hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch-----HHhhhhhhcCccce--eeecc
Confidence 22335678899999999999998889999999999999999995 9999653 22222232222111 01111
Q ss_pred CChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 244 GYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 244 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
....+..+||.+|+..+|..||++.+|+
T Consensus 738 ~~d~eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 738 LPDCEAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred CchHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 1112889999999999999999998884
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=8.9e-33 Score=247.83 Aligned_cols=212 Identities=21% Similarity=0.276 Sum_probs=171.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch---HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~---~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+..-+..||+|++|.|-+.++..+|...|+|-+......+ ++.+|..+......+ |.++.+++........+|+||
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~C-Pf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDC-PFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCC-CeEEEeehhhhccccEEEeHH
Confidence 3445678999999999999999999999999876554432 344555555444433 777777777777888999999
Q ss_pred cCCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 85 LLGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 85 ~~g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
.|..||..+... .+..+++..+-+|+..++.||.|||++ .|||||+||+|||| +..|+||+||||++-.+.++
T Consensus 126 ~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred HhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeehhh
Confidence 999999888653 356799999999999999999999985 89999999999999 68999999999999887765
Q ss_pred ccccccccccCCCCccCccccccccccCC----CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 161 ATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 161 ~~~~~~~~~~~~~~~GT~~Y~APE~~~g~----~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
... +.-.|...|||||.+... .|+.++||||||+++.||.++++||... .+..+.+.++.+..
T Consensus 203 iAk--------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w--~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 203 IAK--------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW--GTPFQQLKQVVEEP 269 (282)
T ss_pred hHH--------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc--CCHHHHHHHHhcCC
Confidence 431 124788999999988643 5899999999999999999999999764 34566666665543
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.7e-32 Score=249.34 Aligned_cols=250 Identities=19% Similarity=0.310 Sum_probs=193.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--CEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG--DYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~--~~~~lvm 83 (475)
.++|++.+++|.|-|++||.|.+..+++.++||+++.- +...+.+|++|++.|.++ +||+.+.....+. ....|++
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-kkkKIkREikIL~nL~gg-~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-KKKKIKREIKILQNLRGG-PNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-HHHHHHHHHHHHHhccCC-CCeeehhhhhcCccccCchhHh
Confidence 46799999999999999999999999999999998754 456799999999999976 9999987776644 4567899
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
|+. ..+...+.. +++..++..++.|++.||.|+|+.||+|||+||.|++|+ .....++|+|+|+|..+.....
T Consensus 115 E~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYHp~~e 188 (338)
T KOG0668|consen 115 EYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKE 188 (338)
T ss_pred hhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcCCCce
Confidence 998 556665553 688899999999999999999999999999999999996 4567899999999988765432
Q ss_pred ccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCC-CCCCHHHHHHHHhh---------
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGL-KAGTKKQKYEKISE--------- 231 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~-~~~~~~~~~~~i~~--------- 231 (475)
-+..+.+..|--||.+..-+ |+..-|+|||||+|..|+..+.||..- ...+..-++.++..
T Consensus 189 --------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 189 --------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred --------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 12335667788899988754 789999999999999999999998532 22222222222110
Q ss_pred ---ccccccHHHHh----------------cC-ChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 232 ---KKVSTSIEALC----------------RG-YPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 232 ---~~~~~~~~~l~----------------~~-~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+.+....+. .. .+++..+|+.++|..|.++|+|+.|..
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 11111111110 11 258899999999999999999998774
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.3e-30 Score=273.52 Aligned_cols=254 Identities=19% Similarity=0.196 Sum_probs=172.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEc----------------cCCeEEEEEEeccCCCc----------------hHHHHHH
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNI----------------QTNEEVAIKLENVKTKH----------------PQLQYEA 53 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~----------------~~~~~vAvKi~~~~~~~----------------~~~~~E~ 53 (475)
.++|++.++||+|+||.||+|.+. ..++.||||.++..... .....|.
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999752 23467999987643211 1122345
Q ss_pred HHHHHHhCCC---CCcCeeEEeeE--------eCCEEEEEEEcC-CCCHHHHHHHcC-----------------------
Q 011882 54 KLYKILQGGS---TGIPNLRWFGV--------EGDYNVLVIDLL-GPSLEDLFNFCS----------------------- 98 (475)
Q Consensus 54 ~il~~l~~~~---~~i~~l~~~~~--------~~~~~~lvme~~-g~sL~~ll~~~~----------------------- 98 (475)
.++..+++.. .+++.+..++. .....+|||||+ +++|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 5555555421 11233333332 234679999999 889999886321
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCc
Q 011882 99 RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 178 (475)
Q Consensus 99 ~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~ 178 (475)
..+++..++.|+.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++.+...... ......+|+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~------~~~~g~~tp 374 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINF------NPLYGMLDP 374 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCCcc------CccccCCCc
Confidence 124667889999999999999999999999999999999 46788999999999755332110 011224588
Q ss_pred cccccccccCCCC----------------------CCchhHHHHHHHHHHHHcCCC-CCCCCCCCCH--------HHHHH
Q 011882 179 RYASMNTHLGIEQ----------------------SRRDDLESLGYVLMYFLRGSL-PWQGLKAGTK--------KQKYE 227 (475)
Q Consensus 179 ~Y~APE~~~g~~~----------------------s~ksDIwSlG~iL~elltG~~-Pf~~~~~~~~--------~~~~~ 227 (475)
.|+|||++..... ..+.||||+|||||+|++|.+ ||.+...... ...+.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 9999999864321 134699999999999999986 7764321111 11111
Q ss_pred HHhhccccccHHHHhcCChHHHHHHHHHHhcCCC---CCCCCHHHHH
Q 011882 228 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRF---DDKPDYAYLK 271 (475)
Q Consensus 228 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp---~~RPt~~~l~ 271 (475)
.+...... .. .....++..++|+.+||..++ .+|+++++++
T Consensus 455 ~~~~~~~~--~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL 498 (507)
T PLN03224 455 MYKGQKYD--FS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL 498 (507)
T ss_pred hhcccCCC--cc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence 11111111 11 234567899999999999866 6899988774
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=4e-32 Score=274.15 Aligned_cols=197 Identities=23% Similarity=0.359 Sum_probs=173.6
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----------CchHHHHHHHHHHHHh-CCCCCcCeeEEeeEe
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----------KHPQLQYEAKLYKILQ-GGSTGIPNLRWFGVE 75 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----------~~~~~~~E~~il~~l~-~~~~~i~~l~~~~~~ 75 (475)
.+|..++.||+|+||.|++|.++.+..+|+||.+.+.. +-..+-.|+.||..|+ +.|+||+++..|+++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45999999999999999999999999999999875432 2234677999999987 567999999999999
Q ss_pred CCEEEEEEEcC--CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 76 GDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 76 ~~~~~lvme~~--g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
++++||+||-- |-+|.++|+ .+..+++.++.-|+.||+.|+++||+.||||||||-+|+++ +.+|.+||+|||.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE-~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE-FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh-ccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccc
Confidence 99999999998 668888887 45679999999999999999999999999999999999999 6899999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQG 216 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~-s~ksDIwSlG~iL~elltG~~Pf~~ 216 (475)
|....... ...++||..|+|||++.|..| +..-|||+||++||.++....||.+
T Consensus 717 aa~~ksgp---------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKSGP---------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcCCC---------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 87544322 246899999999999999887 7888999999999999999999864
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-32 Score=252.28 Aligned_cols=264 Identities=20% Similarity=0.308 Sum_probs=200.3
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC-CCchHHHHHHHHHHHHhCCCCCcCe-eEEeeEeCCEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGGSTGIPN-LRWFGVEGDYNVLV 82 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~-~~~~~~~~E~~il~~l~~~~~~i~~-l~~~~~~~~~~~lv 82 (475)
+.+.|.|.+.||+|-||.+-+|+++.++..+|+|.+... ....++.+|...--.|.++ .||+. +...+...++.+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H-~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPH-QHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccc-hhhhHHHHHHhhcCceEEEe
Confidence 467899999999999999999999999999999976543 3445677777765556554 44443 44455677899999
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
|||+ .++|..-+. ...+-+.....++.|+++||.|||++++||||||.+||||-.. +...|||||||+.+......
T Consensus 101 qE~aP~gdL~snv~--~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVE--AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred eccCccchhhhhcC--cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeecccccccCcee
Confidence 9999 788877665 2458889999999999999999999999999999999999533 44589999999998654322
Q ss_pred cccccccccCCCCccCccccccccccCCC-----CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHHHHHhhcccc
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVS 235 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-----~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~ 235 (475)
. ...-+..|.+||...... ..+.+|||.||+++|.+++|.+||+.....+. ...+.+....+.
T Consensus 178 ~----------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~- 246 (378)
T KOG1345|consen 178 K----------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN- 246 (378)
T ss_pred h----------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC-
Confidence 1 123456789999765432 36789999999999999999999984322221 222333333333
Q ss_pred ccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Q 011882 236 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGF 283 (475)
Q Consensus 236 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~ 283 (475)
...+.....+++.+..++++-|..++++|=-..+..+....++.+..+
T Consensus 247 ~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i 294 (378)
T KOG1345|consen 247 PALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLI 294 (378)
T ss_pred ccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhh
Confidence 344555677889999999999999999997777777777777766554
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-33 Score=260.29 Aligned_cols=256 Identities=19% Similarity=0.280 Sum_probs=186.2
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC--
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG-- 76 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~-- 76 (475)
|....+.+-.+.||-|+||+||.++|..+|+.||+|.+..- .....+.+|.+++..++| .|+....++-...
T Consensus 49 Pqqq~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkH--dNVLSaLDILQPph~ 126 (449)
T KOG0664|consen 49 PQQQQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH--DNVLSLLDILQPANP 126 (449)
T ss_pred ccccccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhcc--ccHHHHHHhcCCCCc
Confidence 34455667788999999999999999999999999965321 123457788888888887 5555443332222
Q ss_pred ---CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 ---DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ---~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
...|++.|+|..+|..++- ....++.+.+.-++.||+.||.|||+.+|+||||||.|.|+ +.+..+||||||+
T Consensus 127 dfFqEiYV~TELmQSDLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGL 202 (449)
T KOG0664|consen 127 SFFQELYVLTELMQSDLHKIIV-SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGL 202 (449)
T ss_pred hHHHHHHHHHHHHHhhhhheec-cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEeccccc
Confidence 1247788888888888775 35579999999999999999999999999999999999999 6889999999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
|+....... .++ +..+-|..|.|||.++|.. |+.+.||||.|||+.||+..+..|+........+.+..+...
T Consensus 203 ARvee~d~~-~hM-----TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGT 276 (449)
T KOG0664|consen 203 ARTWDQRDR-LNM-----THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGT 276 (449)
T ss_pred ccccchhhh-hhh-----HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCC
Confidence 997654332 111 2235688999999999865 899999999999999999999999875543333333322211
Q ss_pred cccccHHHHhcC--------------------------ChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 233 KVSTSIEALCRG--------------------------YPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 233 ~~~~~~~~l~~~--------------------------~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
.-...+.--|.+ -.-+...++..++..||++|.+..+.
T Consensus 277 Ps~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A 340 (449)
T KOG0664|consen 277 PSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEA 340 (449)
T ss_pred CcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhh
Confidence 111111111111 12345677788888888888775443
No 401
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.2e-31 Score=256.21 Aligned_cols=258 Identities=19% Similarity=0.274 Sum_probs=198.9
Q ss_pred CceEEeeeEeeeCceeEEEEEEccC-----CeEEEEEEeccCCCchH---HHHHHHHHHHHhCCCCCcCeeEEeeEe-CC
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKHPQ---LQYEAKLYKILQGGSTGIPNLRWFGVE-GD 77 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~-----~~~vAvKi~~~~~~~~~---~~~E~~il~~l~~~~~~i~~l~~~~~~-~~ 77 (475)
.++++...+-+|.||.||.|.|+.. .+.|.+|.++.....-+ +..|.-++..+ .|+|+..+.+...+ ..
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~--sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA--SHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC--cCCCccceeEEEeeccC
Confidence 4688888999999999999977642 34567776654443322 33344444433 35888888776654 45
Q ss_pred EEEEEEEcC-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~-------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
..++++.++ -++|..++..|+ +.++..++..++.|++.|++|||.+||||.||...|++| ++.-+|||+
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVklt 438 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKLT 438 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEec
Confidence 667777788 679999998553 347888899999999999999999999999999999999 577899999
Q ss_pred ecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHH
Q 011882 150 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK 228 (475)
Q Consensus 150 DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~ 228 (475)
|=.+++.+.....+. -..+......|||||.+.+..|+.++||||||++||||++ |+.||...++......+.+
T Consensus 439 DsaLSRDLFP~DYhc-----LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHC-----LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred cchhccccCcccccc-----cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 999999876655432 1122344678999999999999999999999999999998 9999987655333322222
Q ss_pred HhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 229 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 229 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
.... +.+-+||+++..++..||...|++||+++++...|.++..+.
T Consensus 514 GyRl-------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 514 GYRL-------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred ccee-------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 2111 123579999999999999999999999999999999987554
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.5e-29 Score=233.75 Aligned_cols=208 Identities=28% Similarity=0.428 Sum_probs=182.1
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCCH
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPSL 90 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL 90 (475)
||+|++|.||++.+..+++.++||+....... ..+.+|..+++.+.+ ++++.+..++......+++||++ +++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH--PNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC--CCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 68999999999998778999999998877653 678899999999877 89999999999889999999999 5999
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC-CCcEEEeecCCcccccccccccccccc
Q 011882 91 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRYRDTATHQHIPYR 169 (475)
Q Consensus 91 ~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGlA~~~~~~~~~~~~~~~ 169 (475)
.+++......++...+..++.+++.+|.+||++|++|+||+|.||++. . .+.++|+|||.+........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~~~~~~~~~------- 148 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLSKLLTSDKS------- 148 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCceEEccCCcc-------
Confidence 999985545689999999999999999999999999999999999995 4 68999999999987654321
Q ss_pred cCCCCccCccccccccccCC-CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHH
Q 011882 170 ENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 248 (475)
Q Consensus 170 ~~~~~~GT~~Y~APE~~~g~-~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 248 (475)
......+...|++||.+... ..+.+.|+|+||+++|+| ..
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------~~ 189 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------PE 189 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------HH
Confidence 11234678899999999887 788999999999999999 56
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHH
Q 011882 249 FASYFHYCRSLRFDDKPDYAYLKRL 273 (475)
Q Consensus 249 l~~li~~cl~~dp~~RPt~~~l~~~ 273 (475)
+.+++..|+..+|++||++.++++.
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhC
Confidence 8899999999999999999888653
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=6.2e-31 Score=258.21 Aligned_cols=262 Identities=24% Similarity=0.361 Sum_probs=201.0
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEcc---CCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEE
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYN 79 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~---~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~ 79 (475)
|.+.+.|.++++||+|.|+.||++.+.. ..+.||+|.+........+..|.+++..+.+. .+|..+..+...++..
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~-~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGS-DNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccc-hhhhcchhhhccCCee
Confidence 4567889999999999999999999887 78899999998888888999999999999886 8888999999999999
Q ss_pred EEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccc
Q 011882 80 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 80 ~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
++||||+ .....+++. .++..++..++..++.||.++|.+|||||||||.|||.+ ...+.-.|+|||+|..+.
T Consensus 111 ~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred EEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhHHHHH
Confidence 9999999 566666664 578999999999999999999999999999999999997 556677899999998322
Q ss_pred ccc------c----------ccc---------------------cccccCCCCccCccccccccccCCC-CCCchhHHHH
Q 011882 159 DTA------T----------HQH---------------------IPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESL 200 (475)
Q Consensus 159 ~~~------~----------~~~---------------------~~~~~~~~~~GT~~Y~APE~~~g~~-~s~ksDIwSl 200 (475)
... . ... ..........||++|.|||++...+ ++.++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 110 0 000 0011223457999999999998765 7999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCH--HHH--------HHHH--hhcc------------------cc--------------c
Q 011882 201 GYVLMYFLRGSLPWQGLKAGTK--KQK--------YEKI--SEKK------------------VS--------------T 236 (475)
Q Consensus 201 G~iL~elltG~~Pf~~~~~~~~--~~~--------~~~i--~~~~------------------~~--------------~ 236 (475)
|+|++-++++.+||....+... .+. +.+. .... +. .
T Consensus 265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 9999999999999954322110 000 0000 0000 00 0
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
..+.....+|..+.+++.+|++.||.+|.++++.+
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeAL 379 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRITAEDAL 379 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhcccHHHHh
Confidence 01111122456889999999999999999998763
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-30 Score=243.99 Aligned_cols=255 Identities=20% Similarity=0.223 Sum_probs=193.5
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC----CCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeC----
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEG---- 76 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~----~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~---- 76 (475)
+..+|.-++.+|.|.- .|..+.|..+++.||+|..... ...+...+|..++..+.+ .|++.++.++...
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~--~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNH--KNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcc--cceeeeeeccCccccHH
Confidence 4467888899999998 8888889999999999975433 233567889999988887 7888887776533
Q ss_pred --CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 77 --DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 77 --~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
...|+|||+|..+|.+.+. -.++-+++..|+.|++.|+.|||+.||+||||||+||++ +..+.+||+|||+|
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhh
Confidence 3469999999999999887 357888999999999999999999999999999999999 68899999999999
Q ss_pred ccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh---
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE--- 231 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~--- 231 (475)
+..... .. .+.++.|..|.|||++.|..|...+||||+||++.||++|...|.|...-+...++.....
T Consensus 166 r~e~~~--~~------mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 166 RTEDTD--FM------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPD 237 (369)
T ss_pred cccCcc--cc------cCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCC
Confidence 854332 12 2345889999999999999999999999999999999999999987432221111111000
Q ss_pred -------------------ccccccHHHHhcC------------ChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 232 -------------------KKVSTSIEALCRG------------YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 232 -------------------~~~~~~~~~l~~~------------~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
........++.+. -.....+++.+||..+|++|-+++++ |++.+.
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da---L~HPY~ 313 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA---LRHPYI 313 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH---hcCCee
Confidence 0000111111110 12457899999999999999996655 555443
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=267.28 Aligned_cols=264 Identities=18% Similarity=0.256 Sum_probs=209.7
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.++|++++++|+|.||.||+++++.+++..|+|+++.... ..-++.|+-+++.++| +||+.+++-....+..+++|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h--~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRH--PNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCC--cChHHHHhhhhhhcCcEEEE
Confidence 3689999999999999999999999999999999876643 3457778888777766 99999988888899999999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 162 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~ 162 (475)
||| |++|+++.. ..+.+++.++....+..+.||+|||++|-+|||||-.|||++ +.+.+||.|||.+-.+.....
T Consensus 92 EycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 92 EYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred EecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhhhhhh
Confidence 999 889998875 456899999999999999999999999999999999999995 789999999999987654433
Q ss_pred ccccccccCCCCccCcccccccccc---CCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011882 163 HQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 239 (475)
Q Consensus 163 ~~~~~~~~~~~~~GT~~Y~APE~~~---g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (475)
..+.+.||+.|||||+.. ...|...+|||++|++..|+..-+.|-...... +.+.......+..+..
T Consensus 168 -------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm---r~l~LmTkS~~qpp~l 237 (829)
T KOG0576|consen 168 -------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM---RALFLMTKSGFQPPTL 237 (829)
T ss_pred -------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH---HHHHHhhccCCCCCcc
Confidence 236789999999999763 456899999999999999999888886554332 2221111111111111
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH-----------HHHHHHHHHcCCCC
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK-----------RLFRDLFIREGFQF 285 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~-----------~~L~~l~~~~~~~~ 285 (475)
+-.....+.|.+|++.|+..+|++||+++.++ .+..+++.+.+...
T Consensus 238 kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPN 294 (829)
T ss_pred cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCC
Confidence 11133568899999999999999999987653 34556666665444
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=7.1e-28 Score=226.63 Aligned_cols=197 Identities=30% Similarity=0.451 Sum_probs=168.2
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC---CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~---~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
|.+.+.||+|++|.||+|.+..+++.||||.+.... ....+..|.+.++.+.+ ++++.+..+.......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH--PNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC--CChhhheeeeecCCceEEEEec
Confidence 678899999999999999998889999999987654 23567788888888854 8899999888888999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+ +++|.+++......+++..+..++.|++.+|.+||+++++|+||+|.||+++ ..+.++|+|||++..+......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~~~~~~- 154 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIHRDLAA- 154 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEecCcccc-
Confidence 9 5599999975433389999999999999999999999999999999999994 5689999999999877554210
Q ss_pred ccccccCCCCccCccccccccc-cCCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 011882 165 HIPYRENKNLTGTARYASMNTH-LGIEQSRRDDLESLGYVLMYFLRGSLPWQG 216 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~-~g~~~s~ksDIwSlG~iL~elltG~~Pf~~ 216 (475)
......++..|++||.+ ....++.++|||+||+++|||++|+.||..
T Consensus 155 -----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 -----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11345678899999998 666788899999999999999999999955
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=9.3e-28 Score=218.98 Aligned_cols=167 Identities=17% Similarity=0.181 Sum_probs=128.3
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccc
Q 011882 88 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 167 (475)
Q Consensus 88 ~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~ 167 (475)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||+ +.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc------
Confidence 6899999866667999999999999999999999998 9999999 47788888 99998654321
Q ss_pred cccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH--HHhcCC
Q 011882 168 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE--ALCRGY 245 (475)
Q Consensus 168 ~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~ 245 (475)
..||+.|+|||++.+..++.++|||||||++|||++|..||...... ...+..+.......... .....+
T Consensus 64 ------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (176)
T smart00750 64 ------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMPADDPRDRSNLESV 135 (176)
T ss_pred ------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhccCCccccccHHHH
Confidence 26899999999999999999999999999999999999999764321 12222222111111000 001122
Q ss_pred hH--HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011882 246 PT--EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 279 (475)
Q Consensus 246 p~--~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 279 (475)
+. ++.+++..||..+|++||++.+|++.+..+..
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 33 69999999999999999999999887765543
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=3.3e-28 Score=271.99 Aligned_cols=188 Identities=14% Similarity=0.170 Sum_probs=135.6
Q ss_pred CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEee----------------
Q 011882 76 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL---------------- 139 (475)
Q Consensus 76 ~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~---------------- 139 (475)
....+++||+++.+|.+++......+++.+++.|+.||+.||.|||++|||||||||+||||+.
T Consensus 52 ~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~ 131 (793)
T PLN00181 52 DDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131 (793)
T ss_pred cchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence 3457888999999999999755567999999999999999999999999999999999999942
Q ss_pred CCCCCcEEEeecCCccccccccc--------cccccc-ccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcC
Q 011882 140 GRRANQVYIIDFGLAKRYRDTAT--------HQHIPY-RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 210 (475)
Q Consensus 140 ~~~~~~vkL~DFGlA~~~~~~~~--------~~~~~~-~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG 210 (475)
.+..+.+||+|||+++....... ....+. .......||+.|||||++.+..++.++|||||||+||||++|
T Consensus 132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 12345677777777764321100 000000 001224689999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 211 SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 211 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
..|+.... ..+..+....... ..... ..+...++.+||..+|.+||++.+|++
T Consensus 212 ~~~~~~~~-----~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 212 VSSREEKS-----RTMSSLRHRVLPP---QILLN-WPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCchhhHH-----HHHHHHHHhhcCh---hhhhc-CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 88875321 1122221111111 11111 345678899999999999999998853
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=6e-24 Score=207.89 Aligned_cols=257 Identities=30% Similarity=0.407 Sum_probs=193.3
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
|.+.+.||.|+||.||++.+. ..+++|.+...... ..+.+|..++..+.+. ++++.+..+.......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP-PNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCC-cceeeEEEEEecCCEEEEEE
Confidence 789999999999999999976 78999987665443 3477888888888774 36888888887777789999
Q ss_pred EcC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCC-cEEEeecCCcccccc
Q 011882 84 DLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRD 159 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGlA~~~~~ 159 (475)
+++ +++|.+++.... ..+....+..++.|++.+|.|+|+.+++||||||+|||+. ... .++++|||+++.+..
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcceecCC
Confidence 999 788887776433 2699999999999999999999999999999999999994 555 799999999986554
Q ss_pred cccccccccccCCCCccCccccccccccC---CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCC-CHHHHHHHHhhcccc
Q 011882 160 TATHQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-TKKQKYEKISEKKVS 235 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~g---~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~-~~~~~~~~i~~~~~~ 235 (475)
........ .......||..|++||.+.+ ..++...|+||+|++++++++|..||...... ...+....+......
T Consensus 155 ~~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 155 PGSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233 (384)
T ss_pred CCcccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence 33211000 12356789999999999998 57899999999999999999999998765431 112222222222211
Q ss_pred ccHHHHhcCC----hHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011882 236 TSIEALCRGY----PTEFASYFHYCRSLRFDDKPDYAYLKRL 273 (475)
Q Consensus 236 ~~~~~l~~~~----p~~l~~li~~cl~~dp~~RPt~~~l~~~ 273 (475)
.......... ...+.+++..|+..+|..|.+.......
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0011111111 2578999999999999999987766543
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=2.6e-25 Score=224.45 Aligned_cols=180 Identities=19% Similarity=0.213 Sum_probs=133.6
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEcc-CCeEEEEEEeccCC-------CchHHHHHHHHHHHHhCCCCCcCeeEEeeE
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKT-------KHPQLQYEAKLYKILQGGSTGIPNLRWFGV 74 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~-~~~~vAvKi~~~~~-------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~ 74 (475)
+.+.++|++.+.||+|+||+||+|.+.. +++.||||++.... ....+.+|+++++.+.+. ..++.++.+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~-~iv~~l~~~-- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI-GVVPQLLAT-- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC-CCCcEEEEc--
Confidence 4577899999999999999999999876 67888999864321 123478999999999873 334455543
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEeeCCCCCcEEEeecC
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI-KPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDI-KP~NILl~~~~~~~~vkL~DFG 152 (475)
...||||||+ |++|.. +. ... ...++.|++.+|.|||++||+|||| ||+|||++ .++.+||+|||
T Consensus 91 --~~~~LVmE~~~G~~L~~-~~----~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFG 157 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHL-AR----PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQ 157 (365)
T ss_pred --CCcEEEEEccCCCCHHH-hC----ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECc
Confidence 3479999999 778863 21 111 1467899999999999999999999 99999994 56789999999
Q ss_pred Cccccccccccccc-ccccCCCCccCccccccccccCCC------CCCchhHH
Q 011882 153 LAKRYRDTATHQHI-PYRENKNLTGTARYASMNTHLGIE------QSRRDDLE 198 (475)
Q Consensus 153 lA~~~~~~~~~~~~-~~~~~~~~~GT~~Y~APE~~~g~~------~s~ksDIw 198 (475)
+|+.+........+ .+..-.+..+++.|+|||.+...+ .+...|-|
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99987664432222 112224678899999999987543 23446666
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=3.6e-24 Score=229.41 Aligned_cols=253 Identities=20% Similarity=0.242 Sum_probs=180.6
Q ss_pred EEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC---CCchH-----HHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---TKHPQ-----LQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 10 ~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~---~~~~~-----~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
.....+|.|++|.|+.+......+.++.|..... ..... +..|..+-..| .|++++.......+.....-
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l--~h~~~~e~l~~~~~~~~~~~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL--SHPNIIETLDIVQEIDGILQ 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc--cCCchhhhHHHHhhcccchh
Confidence 5678899999999998887766666666654321 11111 11122222222 33555443333333333333
Q ss_pred EEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccc
Q 011882 82 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 161 (475)
Q Consensus 82 vme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~ 161 (475)
+||||..+|..++.. ...++..++..++.|++.||.|||+.||.||||||+|+|+. ..+.+||+|||.+..+.-..
T Consensus 399 ~mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 399 SMEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hhhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeeccCc
Confidence 499995599888873 34799999999999999999999999999999999999994 77899999999998776543
Q ss_pred cccccccccCCCCccCccccccccccCCCCCC-chhHHHHHHHHHHHHcCCCCCCCCCCCCHHH-HHHHHhhccccccHH
Q 011882 162 THQHIPYRENKNLTGTARYASMNTHLGIEQSR-RDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-KYEKISEKKVSTSIE 239 (475)
Q Consensus 162 ~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~-ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~ 239 (475)
... .......+|+..|+|||++.+.+|.+ ..||||.|++++.|++|+.||......+... ...............
T Consensus 475 e~~---~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~ 551 (601)
T KOG0590|consen 475 EKN---IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN 551 (601)
T ss_pred chh---hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence 321 11345679999999999999999964 6899999999999999999998654433221 111112222333445
Q ss_pred HHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 240 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 240 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
.+...+|.+-+.+|.+||+.+|.+|-++++|+
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~ 583 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQIL 583 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHh
Confidence 56677899999999999999999999987773
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=7.4e-23 Score=189.78 Aligned_cols=138 Identities=23% Similarity=0.264 Sum_probs=103.7
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC-----------chH-----------------HHHHHHHHHHHhCC
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----------HPQ-----------------LQYEAKLYKILQGG 62 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----------~~~-----------------~~~E~~il~~l~~~ 62 (475)
+.+.||+|+||.||+|.+. +|+.||||+++.... ... ...|.+++..+.+.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 1 INGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred CCCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 3578999999999999986 899999999865421 011 23488889988763
Q ss_pred CCCcCeeEEeeEeCCEEEEEEEcCC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCcEEEeeC
Q 011882 63 STGIPNLRWFGVEGDYNVLVIDLLG-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV-HSKSFLHRDIKPDNFLMGLG 140 (475)
Q Consensus 63 ~~~i~~l~~~~~~~~~~~lvme~~g-~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yL-H~~gIvHrDIKP~NILl~~~ 140 (475)
+++....+... ..+|||||++ ++|...+. ....++..+++.++.||+.+|.|| |+.||+||||||+|||++
T Consensus 80 --~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-- 152 (190)
T cd05147 80 --GIPCPEPILLK--SHVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-- 152 (190)
T ss_pred --CCCCCcEEEec--CCEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE--
Confidence 33222222222 2389999995 44444322 245799999999999999999999 799999999999999994
Q ss_pred CCCCcEEEeecCCccccc
Q 011882 141 RRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 141 ~~~~~vkL~DFGlA~~~~ 158 (475)
.+.++|+|||+|....
T Consensus 153 --~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 --DGKLYIIDVSQSVEHD 168 (190)
T ss_pred --CCcEEEEEccccccCC
Confidence 3679999999997543
No 413
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=1.7e-22 Score=196.11 Aligned_cols=232 Identities=23% Similarity=0.277 Sum_probs=147.7
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch-----HHHHHHHHHHHHhC---------CCCCcCeeEEe-
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-----QLQYEAKLYKILQG---------GSTGIPNLRWF- 72 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~-----~~~~E~~il~~l~~---------~~~~i~~l~~~- 72 (475)
.+...+.||.|+|+.||.+++..||+++|||+........ ++.+|.-....+.+ ....++.+...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4667899999999999999999999999999876544322 23333322222111 00001111100
Q ss_pred -------eEeC---C-----EEEEEEEcCCCCHHHHHHHc---CCC---CCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 011882 73 -------GVEG---D-----YNVLVIDLLGPSLEDLFNFC---SRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIK 131 (475)
Q Consensus 73 -------~~~~---~-----~~~lvme~~g~sL~~ll~~~---~~~---ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIK 131 (475)
.... . ..+++|+.+-++|.+++... ... +.....+.+..|++..+++||..||||+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1111 1 23678888899999987532 221 2334446677999999999999999999999
Q ss_pred CCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccC--------CCCCCchhHHHHHHH
Q 011882 132 PDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG--------IEQSRRDDLESLGYV 203 (475)
Q Consensus 132 P~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g--------~~~s~ksDIwSlG~i 203 (475)
|+||++ +.+|.++|+||+........... ...+..|.+||.... ..++.+.|.|+||++
T Consensus 173 ~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~----------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 173 PENFLL---DQDGGVFLGDFSSLVRAGTRYRC----------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp GGGEEE----TTS-EEE--GGGEEETTEEEEG----------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred eeeEEE---cCCCCEEEcChHHHeecCceeec----------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 999999 58899999999887755432210 133577899997643 247889999999999
Q ss_pred HHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCC
Q 011882 204 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDK 264 (475)
Q Consensus 204 L~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~R 264 (475)
+|.|++|.+||........... .-..|.++|+.++.||..+|+.+|++|
T Consensus 240 ly~lWC~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHSS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999986433211110 122466889999999999999999987
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=5.9e-23 Score=193.74 Aligned_cols=171 Identities=15% Similarity=0.225 Sum_probs=129.4
Q ss_pred CCccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchH-----------HHHHHHHHHHHhCCCCCcCeeE
Q 011882 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-----------LQYEAKLYKILQGGSTGIPNLR 70 (475)
Q Consensus 2 ~~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~-----------~~~E~~il~~l~~~~~~i~~l~ 70 (475)
+..+.++|++++.||.|+||.||++.+ ++..+|||++.......+ +.+|+..+..+.+ ++++.+.
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~--~GI~~~~ 101 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS--EGLASLN 101 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH--CCCCcce
Confidence 346789999999999999999999764 577899999865432222 4677778888866 7888887
Q ss_pred EeeEeC--------CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCC
Q 011882 71 WFGVEG--------DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 71 ~~~~~~--------~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 141 (475)
.++... ...+|+|||+ |.+|.++.. +++ ....+|+.+|..||+.||+||||||+|||++
T Consensus 102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~--- 169 (232)
T PRK10359 102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS--- 169 (232)
T ss_pred EeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---
Confidence 775533 3578999999 678987742 333 2456999999999999999999999999995
Q ss_pred CCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHH
Q 011882 142 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL 208 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ell 208 (475)
.++ ++|+|||..+....... .-..++...|+.++|||+|||+|..+.
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a-------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKA-------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhh-------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 455 99999998876533211 011344455778999999999987654
No 415
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1e-21 Score=215.12 Aligned_cols=256 Identities=23% Similarity=0.325 Sum_probs=183.9
Q ss_pred cCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhC-CCCCcCeeEEeeEeCCEEEEEE
Q 011882 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQG-GSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 5 i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~-~~~~i~~l~~~~~~~~~~~lvm 83 (475)
-+..|.|.+.||+|+||.||+|.+.. |+.||||+.+.....+ +..-.+++.+|+. .-+.|..+.......+.-+||+
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-eeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 36679999999999999999999755 9999999987665433 1112223333330 0033444444455667778999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC----CCCCcEEEeecCCccccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG----RRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~----~~~~~vkL~DFGlA~~~~ 158 (475)
+|. .|+|.++++ ..+.+++..+..|+.||+.-++.||..+|||+||||+|+||... .+...++|+|||.+--+.
T Consensus 774 ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 774 EYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred eccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 999 999999998 56679999999999999999999999999999999999999642 234569999999986543
Q ss_pred ccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011882 159 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 238 (475)
Q Consensus 159 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 238 (475)
--.... ..+..++|-.+-.+|+..|.+++...|.|.|..+++-||.|+.-= ...+. .......+
T Consensus 853 lfp~~~-----~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--~~~g~---------~~~~~~~~ 916 (974)
T KOG1166|consen 853 LFPDGT-----KFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--VKNGS---------SWMVKTNF 916 (974)
T ss_pred EcCCCc-----EEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--hcCCc---------ceeccccc
Confidence 322211 123457899999999999999999999999999999999985321 00000 00001111
Q ss_pred HHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 239 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 239 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
..+.. -.-..+++..+|..|-..=|...+|+..|++.+.+.
T Consensus 917 ~Ry~~--~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 917 PRYWK--RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred hhhhh--HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 11111 023456777788877777888899988888887654
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=1.1e-21 Score=181.97 Aligned_cols=138 Identities=21% Similarity=0.288 Sum_probs=105.3
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----------------------------hHHHHHHHHHHHHhCC
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----------------------------PQLQYEAKLYKILQGG 62 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----------------------------~~~~~E~~il~~l~~~ 62 (475)
+.+.||+|+||.||+|.+. +|+.||||+++..... ..+..|...+..+.+.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999986 8999999998754211 1135678888888763
Q ss_pred CCCcCeeEEeeEeCCEEEEEEEcCCC-CHH-HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEee
Q 011882 63 STGIPNLRWFGVEGDYNVLVIDLLGP-SLE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGL 139 (475)
Q Consensus 63 ~~~i~~l~~~~~~~~~~~lvme~~g~-sL~-~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~ 139 (475)
...++....+ .. .||||||+++ ++. ..+. ...++..++..++.|++.+|.+||+ +||+||||||+|||++
T Consensus 80 ~i~~p~~~~~--~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~- 152 (190)
T cd05145 80 GVPVPEPILL--KK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCCCceEEEe--cC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-
Confidence 2223333332 22 4899999944 333 3333 3468889999999999999999999 9999999999999994
Q ss_pred CCCCCcEEEeecCCcccccc
Q 011882 140 GRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 140 ~~~~~~vkL~DFGlA~~~~~ 159 (475)
++.++|+|||+|+....
T Consensus 153 ---~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 ---DGKPYIIDVSQAVELDH 169 (190)
T ss_pred ---CCCEEEEEcccceecCC
Confidence 57899999999986543
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.4e-21 Score=181.00 Aligned_cols=193 Identities=17% Similarity=0.108 Sum_probs=139.9
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCch------HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP------QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~------~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
+.+...|++|+||+||++.. .+..++.+-+....... .+.+|+++++.|.+. ++++.++.+ +..+++
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~-~~vP~ll~~----~~~~lv 76 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL-PRTPRLLHW----DGRHLD 76 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC-CCCCEEEEE----cCEEEE
Confidence 44678899999999998873 77888877665544322 367899999999775 888888765 346899
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEeeCCCCCcEEEeecCCccccccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI-KPDNFLMGLGRRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDI-KP~NILl~~~~~~~~vkL~DFGlA~~~~~~ 160 (475)
|+|+ |.+|.+.+.. ....++.|++.+|.+||++||+|||| ||+|||++ .++.++|+|||+|......
T Consensus 77 meyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 77 RSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred EeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCc
Confidence 9998 7788654321 12457889999999999999999999 79999994 6678999999999854432
Q ss_pred ccccc-cccc-----cCCCCccCccccccccccCC-CCC-CchhHHHHHHHHHHHHcCCCCCCCCCC
Q 011882 161 ATHQH-IPYR-----ENKNLTGTARYASMNTHLGI-EQS-RRDDLESLGYVLMYFLRGSLPWQGLKA 219 (475)
Q Consensus 161 ~~~~~-~~~~-----~~~~~~GT~~Y~APE~~~g~-~~s-~ksDIwSlG~iL~elltG~~Pf~~~~~ 219 (475)
..... ..++ .......++.|++|+...-. ..+ .+.++++.|+.+|.++|+.+++.+...
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 21000 0000 00011357788888866543 233 567888999999999999999876544
No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.86 E-value=3.6e-22 Score=214.79 Aligned_cols=218 Identities=22% Similarity=0.352 Sum_probs=153.2
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
-.+|..++.|-.|+||.||+++++.+.+.+|+|+-+ +.. |++. |. ...+..+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l---------ilRn-------il------t~a~npfvv--- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL---------ILRN-------IL------TFAGNPFVV--- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cch---------hhhc-------cc------cccCCccee---
Confidence 468999999999999999999999999999997522 111 1110 00 011111222
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc-
Q 011882 86 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ- 164 (475)
Q Consensus 86 ~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~- 164 (475)
++-..+++. -++++.. ++.+++|||+.||+|||+||+|.||+ .-|.+|++|||+.+.........
T Consensus 136 --gDc~tllk~-~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 --GDCATLLKN-IGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred --chhhhhccc-CCCCcch--------hhHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchh
Confidence 333344442 2234332 37899999999999999999999995 78999999999998643221110
Q ss_pred ---cc----ccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011882 165 ---HI----PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 237 (475)
Q Consensus 165 ---~~----~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 237 (475)
++ .....+.++||+.|.|||++.-..|+..+|+|++|+|+||++.|..||.+.+. .+.+..+...... .
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp---eelfg~visd~i~-w 277 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---EELFGQVISDDIE-W 277 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH---HHHHhhhhhhhcc-c
Confidence 11 01123567999999999999999999999999999999999999999998544 3333333222211 1
Q ss_pred HHHHhcCChHHHHHHHHHHhcCCCCCCCCHH
Q 011882 238 IEALCRGYPTEFASYFHYCRSLRFDDKPDYA 268 (475)
Q Consensus 238 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~ 268 (475)
.+. -..++++.++++.++|..+|.+|--..
T Consensus 278 pE~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 278 PEE-DEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ccc-CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 111 245789999999999999999996433
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.2e-22 Score=214.44 Aligned_cols=251 Identities=14% Similarity=0.100 Sum_probs=175.9
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
+|...+.||++.|=.|.+|++ ..|. |+||++-..... ..+.++.+-.+..-..++|+..+....+.+...|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 688899999999999999986 3444 999987544321 22333333233333344888877766777778888989
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccc-
Q 011882 85 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH- 163 (475)
Q Consensus 85 ~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~- 163 (475)
|...+|.|.+. ...-+...+...|+.||+.||..+|..||+|+|||.+||||+ .-+-+.|+||..-+..--+.+.
T Consensus 102 yvkhnLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 102 YVKHNLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHhhhhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCCCc
Confidence 99999999886 233378889999999999999999999999999999999995 6677999999877653222111
Q ss_pred cccccccCCCCccCccccccccccCC----------C-CCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhh
Q 011882 164 QHIPYRENKNLTGTARYASMNTHLGI----------E-QSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 164 ~~~~~~~~~~~~GT~~Y~APE~~~g~----------~-~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
..+.|.. .+..--.+|.|||.|... . .+++.||||+||++.||++ |+.||.- ...-.|....
T Consensus 178 adf~fFF-DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~- 251 (1431)
T KOG1240|consen 178 ADFTFFF-DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGN- 251 (1431)
T ss_pred ccceEEE-ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccC-
Confidence 1111110 111234579999988641 2 5789999999999999998 7888842 1111122211
Q ss_pred ccccccHHHHhcCC-hHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011882 232 KKVSTSIEALCRGY-PTEFASYFHYCRSLRFDDKPDYAYLKRL 273 (475)
Q Consensus 232 ~~~~~~~~~l~~~~-p~~l~~li~~cl~~dp~~RPt~~~l~~~ 273 (475)
....+.+...+ ...+++++..|++.||.+|.++++.++.
T Consensus 252 ---~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 252 ---ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ---ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 12222222222 2468999999999999999999988665
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=3e-22 Score=206.32 Aligned_cols=250 Identities=19% Similarity=0.261 Sum_probs=191.1
Q ss_pred eEeeeCceeEEEEEEc---cCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 14 KIGSGSFGEIYLGTNI---QTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~---~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
.+|+|.||.|+++.-. ..+.-+|+|+.+..... .....|..++..++.. +.++.++.........++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~-~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNT-PFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCC-CceeeeeeeeccccchhHhhhhc
Confidence 3799999999998632 34567899987654322 1345677777777644 88889988888888999999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
|+.|...+. ....+++..+..+...++.+++++|+.+|+|||+|++||++ +..|.+++.|||+++...+...
T Consensus 80 rgg~lft~l~-~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~--- 152 (612)
T KOG0603|consen 80 RGGDLFTRLS-KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKI--- 152 (612)
T ss_pred ccchhhhccc-cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhh---
Confidence 767766654 34568889999999999999999999999999999999999 6889999999999997765332
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 245 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 245 (475)
.+||..|||||++. ....++|.||||++++||++|..||.+ +....|...+... +..+
T Consensus 153 --------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~~Il~~~~~~-----p~~l 210 (612)
T KOG0603|consen 153 --------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMKRILKAELEM-----PREL 210 (612)
T ss_pred --------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHHHHhhhccCC-----chhh
Confidence 28999999999999 457899999999999999999999987 2233333323222 1334
Q ss_pred hHHHHHHHHHHhcCCCCCCCCH--HHHHHHHHHHHHHcCCCCCCccccccccccccc
Q 011882 246 PTEFASYFHYCRSLRFDDKPDY--AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 300 (475)
Q Consensus 246 p~~l~~li~~cl~~dp~~RPt~--~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 300 (475)
..+..+++.+++..+|..|--. .-+.+..++. +-...||.....++.+
T Consensus 211 ~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~-------f~~~i~~~~l~~r~~~ 260 (612)
T KOG0603|consen 211 SAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHE-------FFQSIDWNELEARSRP 260 (612)
T ss_pred hHHHHHHHHHHHhhCHHHHhccCcchhHHHhccc-------hheeeeHhhHhhcCCC
Confidence 5778899999999999999765 3344444433 3455788876655443
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=7.7e-21 Score=185.64 Aligned_cols=192 Identities=18% Similarity=0.229 Sum_probs=144.4
Q ss_pred CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC-CcEEEeecCCc
Q 011882 76 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDFGLA 154 (475)
Q Consensus 76 ~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~-~~vkL~DFGlA 154 (475)
+...|+||.-...+|.+++. .+..+......|+.|+++|+.|||.+||.|||+|.+||||..+++. ..+.|+|||.+
T Consensus 315 ~~tlylvMkrY~~tLr~yl~--~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQTLREYLW--TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred CceEEEehhcchhhHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence 44579999999999999986 4567888899999999999999999999999999999999776433 46789999988
Q ss_pred ccccccccccccccccC-CCCccCccccccccccCCCC------CCchhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHH
Q 011882 155 KRYRDTATHQHIPYREN-KNLTGTARYASMNTHLGIEQ------SRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKY 226 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-~~~~GT~~Y~APE~~~g~~~------s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~-~~~~ 226 (475)
-.- ....-..||... -...|....||||+....+- -.++|.|+.|.+.||++....||........ ...|
T Consensus 393 LAd--~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y 470 (598)
T KOG4158|consen 393 LAD--DNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY 470 (598)
T ss_pred eec--cccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh
Confidence 532 222233444322 23467889999999875431 2489999999999999999999987322111 1112
Q ss_pred HHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011882 227 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 278 (475)
Q Consensus 227 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 278 (475)
++ ..++.+...+|+.+++++..+|+.||.+|++..-..+.|+=.+
T Consensus 471 qe-------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsL 515 (598)
T KOG4158|consen 471 QE-------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSL 515 (598)
T ss_pred hh-------hhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHH
Confidence 21 2234556788999999999999999999999776555555333
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=4.5e-20 Score=176.97 Aligned_cols=142 Identities=19% Similarity=0.214 Sum_probs=110.6
Q ss_pred ceEEeeeEeeeCceeEEEEE-EccCCeEEEEEEeccCCCc--------------------------hHHHHHHHHHHHHh
Q 011882 8 KFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLENVKTKH--------------------------PQLQYEAKLYKILQ 60 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~-~~~~~~~vAvKi~~~~~~~--------------------------~~~~~E~~il~~l~ 60 (475)
-|++.+.||+|+||.||+|. +..+|+.||||++...... ..+..|..++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999998 6789999999987653210 12467999999997
Q ss_pred CCCCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcEEEe
Q 011882 61 GGSTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMG 138 (475)
Q Consensus 61 ~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~ 138 (475)
.....++.++.+. ..++||||+ |.+|..+.. ....+...++..++.||+.+|.+||++| |+||||||+|||+.
T Consensus 109 ~~~i~~p~~~~~~----~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAWR----RNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEec----CceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 6334455554432 248999999 446655432 2345667778899999999999999999 99999999999994
Q ss_pred eCCCCCcEEEeecCCccccc
Q 011882 139 LGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 139 ~~~~~~~vkL~DFGlA~~~~ 158 (475)
.+.++|+|||+|....
T Consensus 184 ----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 ----DGKVVIIDVSQSVELD 199 (237)
T ss_pred ----CCCEEEEEChhhhccC
Confidence 5789999999987543
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=2.9e-19 Score=167.70 Aligned_cols=137 Identities=16% Similarity=0.220 Sum_probs=107.5
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCC--CchHHHHHHHHHHHHhC---CCCCcCeeEEeeEeCC---E-EEEE
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQG---GSTGIPNLRWFGVEGD---Y-NVLV 82 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~--~~~~~~~E~~il~~l~~---~~~~i~~l~~~~~~~~---~-~~lv 82 (475)
.+.||+|+||.||. ++.++.. +||++.... ....+.+|+.+++.+.+ .|++|+.++++...+. + ..+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 57899999999995 6677666 699876532 23568999999999965 5699999998888763 4 3478
Q ss_pred EEcCC---CCHHHHHHHcCCCCCHHHHHHHHHHHHHHH-HHHHhCCceecCCCCCcEEEeeCC-CCCcEEEeecCCcc
Q 011882 83 IDLLG---PSLEDLFNFCSRKLSLKTVLMLADQMINRV-EFVHSKSFLHRDIKPDNFLMGLGR-RANQVYIIDFGLAK 155 (475)
Q Consensus 83 me~~g---~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL-~yLH~~gIvHrDIKP~NILl~~~~-~~~~vkL~DFGlA~ 155 (475)
|||+| ++|.+++.. ..+++. ..++.|++.++ +|||+++||||||||+|||++..+ ....++|+||+.+.
T Consensus 84 ~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred ecCCCCcchhHHHHHHc--ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 99965 899999974 346655 46688888888 999999999999999999997533 34589999955443
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.1e-20 Score=174.47 Aligned_cols=243 Identities=13% Similarity=0.158 Sum_probs=183.6
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
...++-+|.+...|+.|+|+|. |..+++|+++..... .++..|.--++.+.| |||..+.+.+.......++.
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifsh--pnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSH--PNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred hhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecC--CchhhhhhhccCCCCceEee
Confidence 3456778999999999999985 446778888765433 346667777777776 99999999999888889999
Q ss_pred EcC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEeeCCCCCcEEE--eecCCcccc
Q 011882 84 DLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYI--IDFGLAKRY 157 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL--~DFGlA~~~ 157 (475)
.|| .++|..++..... .++..++.+++.+|+.|+.|||+.. |.---|....++| |++.+.+| +|--++...
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarismad~kfsfqe 343 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISMADTKFSFQE 343 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheecccceeeeec
Confidence 999 8899999975432 2678899999999999999999864 3334578888999 45554443 343322110
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCC---CchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 234 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s---~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 234 (475)
....-.+.||+||.+...+-+ +++|+|||.++||||.|...||.+........ +|. +
T Consensus 344 --------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm---kia---l 403 (448)
T KOG0195|consen 344 --------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM---KIA---L 403 (448)
T ss_pred --------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---hhh---h
Confidence 112346889999999877643 57899999999999999999998865533222 222 2
Q ss_pred cccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011882 235 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 277 (475)
Q Consensus 235 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 277 (475)
......++.+++..+..|+..|+..||.+||.|+.|+-+|+++
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 2233345678889999999999999999999999999988875
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=2.8e-18 Score=161.24 Aligned_cols=132 Identities=27% Similarity=0.417 Sum_probs=105.5
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----------hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----------PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----------~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
++.||+|++|.||+|.+ .+..|+||+....... ..+.+|..++..+.+ ++++....++......++
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~p~~~~~~~~~~~l 76 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK--AGVNVPAVYFVDPENFII 76 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCeEEEEeCCCCEE
Confidence 36799999999999986 7788999976543221 236678888888876 445444444455667789
Q ss_pred EEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 82 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 82 vme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
+|||+ |.+|.+++.... . ....++.+|+.+|.+||+.||+|||++|.|||+. .+.++|+|||+++.
T Consensus 77 v~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 99999 889999986422 2 8889999999999999999999999999999994 57899999999864
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=3.5e-18 Score=159.18 Aligned_cols=127 Identities=25% Similarity=0.410 Sum_probs=99.9
Q ss_pred eEeeeCceeEEEEEEccCCeEEEEEEeccCCC----------chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~----------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.||+|+||.||+|. .++..|++|+...... ..++.+|.+++..+.+....++.+ ++......+++|
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~--~~~~~~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVV--YDVDPDNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE--EEEECCCCEEEE
Confidence 48999999999998 4678899998543321 134567999999988743344444 444566678999
Q ss_pred EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 84 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 84 e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
||+ |++|.+++.... . .++.|++.+|.+||+.||+|+|+||.|||+. .+.++|+|||+++.
T Consensus 77 e~~~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKY 138 (199)
T ss_pred EEECCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcC
Confidence 999 889998876321 1 8899999999999999999999999999994 67899999999875
No 427
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=1.6e-18 Score=178.67 Aligned_cols=209 Identities=16% Similarity=0.228 Sum_probs=162.5
Q ss_pred CCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-eecCCCCCcEEEeeC
Q 011882 63 STGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-LHRDIKPDNFLMGLG 140 (475)
Q Consensus 63 ~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gI-vHrDIKP~NILl~~~ 140 (475)
|.|+..+.+.+..+...++|.+|| .++|.+.+......+++.-...++.+|+.||.|||...| .|+.|+..|+++
T Consensus 6 h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv--- 82 (484)
T KOG1023|consen 6 HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV--- 82 (484)
T ss_pred hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee---
Confidence 488999999999999999999999 899999998766778888999999999999999998766 999999999999
Q ss_pred CCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCC-------CCCchhHHHHHHHHHHHHcCCCC
Q 011882 141 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-------QSRRDDLESLGYVLMYFLRGSLP 213 (475)
Q Consensus 141 ~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~-------~s~ksDIwSlG~iL~elltG~~P 213 (475)
+....+||+|||+.......... .......-...|.|||.+.+.. .+.+.||||||++++|+++.+.|
T Consensus 83 d~~w~lklt~~Gl~~~~~~~~~~-----~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 83 DSRWVLKLTDFGLNSLLEETAEP-----EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred eeeEEEEechhhhcccccccccc-----cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 68899999999998776431100 0111123456799999998742 36779999999999999999999
Q ss_pred CCCCCCCC-HHHHHHHHhh---ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011882 214 WQGLKAGT-KKQKYEKISE---KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 214 f~~~~~~~-~~~~~~~i~~---~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 280 (475)
|....... ..+.+..+.. ....+.+.... .+++++..++..||..+|++||++..+...++.+...
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 98643222 2333333333 22233333222 5677899999999999999999999998888877653
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=3.4e-18 Score=159.51 Aligned_cols=137 Identities=20% Similarity=0.288 Sum_probs=105.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCC------------------------chHHHHHHHHHHHHhCCC
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------------------------HPQLQYEAKLYKILQGGS 63 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~------------------------~~~~~~E~~il~~l~~~~ 63 (475)
.|.+.+.||+|+||.||+|.+ .+|+.||||++..... ......|..++..+.+..
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 488999999999999999986 4899999998654320 012456777787776632
Q ss_pred CCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC
Q 011882 64 TGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 142 (475)
Q Consensus 64 ~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 142 (475)
..++.... ....++||||+ |++|..+.. ......++.+|+.++.++|+.||+||||||+||++ +.
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~ 160 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DD 160 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cC
Confidence 23444433 23458999999 778766532 13466889999999999999999999999999999 46
Q ss_pred CCcEEEeecCCcccccc
Q 011882 143 ANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 143 ~~~vkL~DFGlA~~~~~ 159 (475)
++.++|+|||++..+..
T Consensus 161 ~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 161 DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcEEEEECCccccCCC
Confidence 78999999999976544
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=2.6e-19 Score=181.51 Aligned_cols=174 Identities=25% Similarity=0.348 Sum_probs=130.6
Q ss_pred CEEEEEEEcC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCC
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 153 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~--~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 153 (475)
.+.||.|++| ..+|.+++... ...-++...+.++.|++.|++| +|.+|||+||.||++. .+.++||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhh
Confidence 4689999999 88999999632 2347788999999999999999 9999999999999995 566899999999
Q ss_pred cccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhc
Q 011882 154 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK 232 (475)
Q Consensus 154 A~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 232 (475)
........+ ..-++.......||..||+||++.|..|+.++||||||+||+|++. -..+|.... .+..+...
T Consensus 403 ~ts~~~~~~-~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~------t~~d~r~g 475 (516)
T KOG1033|consen 403 VTSQDKDET-VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA------TLTDIRDG 475 (516)
T ss_pred eeecccCCc-ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH------hhhhhhcC
Confidence 987765541 1112223455689999999999999999999999999999999997 344443211 12222222
Q ss_pred cccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCH
Q 011882 233 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 267 (475)
Q Consensus 233 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 267 (475)
.++ +.+...+| +-..|+++++...|.+||++
T Consensus 476 ~ip---~~~~~d~p-~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 476 IIP---PEFLQDYP-EEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred CCC---hHHhhcCc-HHHHHHHHhcCCCcccCchH
Confidence 222 12223333 44689999999999999943
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.74 E-value=1.7e-17 Score=177.83 Aligned_cols=133 Identities=25% Similarity=0.441 Sum_probs=104.5
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-C---------chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-K---------HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~---------~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
..|...++||+|+||.||+|.+. +..+++|+...+. . ...+.+|.+++..+++ ++++....++...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~p~~~~~~~ 408 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR--AGVPTPVIYDVDP 408 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc--cCCCeeEEEEEeC
Confidence 44567899999999999999864 3344444321111 1 1346789999999876 6666666666666
Q ss_pred CEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 77 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 77 ~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
...++||||+ |++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ +.+.++|+|||+++
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~liDFGla~ 475 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGK 475 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEEeCcccc
Confidence 7789999999 889998875 356799999999999999999999999999999 35689999999997
Q ss_pred c
Q 011882 156 R 156 (475)
Q Consensus 156 ~ 156 (475)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=6e-17 Score=149.27 Aligned_cols=137 Identities=24% Similarity=0.348 Sum_probs=96.9
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----hH----------------------HHHHHHHHHHHhCCCC
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQ----------------------LQYEAKLYKILQGGST 64 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~----~~----------------------~~~E~~il~~l~~~~~ 64 (475)
+.+.||+|+||.||+|.+. +++.||||++...... .. ...|...+..+.....
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999975 8999999987653211 00 1345555555554323
Q ss_pred CcCeeEEeeEeCCEEEEEEEcCCC-CHH-HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCC
Q 011882 65 GIPNLRWFGVEGDYNVLVIDLLGP-SLE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 65 ~i~~l~~~~~~~~~~~lvme~~g~-sL~-~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~ 141 (475)
.++....+ ...++||||+.+ .+. ..+.... . ...+..++.+++.++.++|. +||+||||||+||+++
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~--- 149 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD--- 149 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE---
Confidence 34444433 235899999943 221 1222111 1 16788999999999999999 9999999999999994
Q ss_pred CCCcEEEeecCCcccccc
Q 011882 142 RANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~~~ 159 (475)
++.++|+|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 67899999999976544
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=1.5e-15 Score=145.93 Aligned_cols=133 Identities=17% Similarity=0.216 Sum_probs=99.6
Q ss_pred eeEe-eeCceeEEEEEEccCCeEEEEEEeccCC---------------CchHHHHHHHHHHHHhCCCCCcCeeEEeeEe-
Q 011882 13 RKIG-SGSFGEIYLGTNIQTNEEVAIKLENVKT---------------KHPQLQYEAKLYKILQGGSTGIPNLRWFGVE- 75 (475)
Q Consensus 13 ~~LG-~G~fG~Vy~a~~~~~~~~vAvKi~~~~~---------------~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~- 75 (475)
..|| .||.|+||.+.. .+..++||.+.... ......+|..++..|.+....++....+...
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 899999999874 47789999764311 1235678999999998754445666555432
Q ss_pred CCE---EEEEEEcC-C-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEee
Q 011882 76 GDY---NVLVIDLL-G-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 150 (475)
Q Consensus 76 ~~~---~~lvme~~-g-~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 150 (475)
... .++|||++ | .+|.+++.. ..++... +.||+.+|.+||++||+||||||.|||++ .++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD---PDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCCCEEEEE
Confidence 222 35999999 4 589988863 3455543 57899999999999999999999999994 556899999
Q ss_pred cCCccc
Q 011882 151 FGLAKR 156 (475)
Q Consensus 151 FGlA~~ 156 (475)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999864
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=9.5e-16 Score=134.54 Aligned_cols=133 Identities=20% Similarity=0.333 Sum_probs=109.2
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCC
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPS 89 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~s 89 (475)
+++.||.|.++.||++... +..++||..........+..|..++..+.+....++.+..+....+..+++|||+ |..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4678999999999999963 3789999876544345788999999999874467888888777778899999999 555
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 90 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 90 L~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
+..+ +......++.+++.+|.+||.. +++|+||||+|||+. +.+.++|+|||.++.
T Consensus 80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY 138 (155)
T ss_pred cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence 5433 5567778899999999999984 799999999999995 468899999999863
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=4.2e-17 Score=175.11 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=188.9
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccC-CeEEEEEEeccCCCc----hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLENVKTKH----PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~-~~~vAvKi~~~~~~~----~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
...|.+.+.||+|+|+.|-+.....+ ...+|+|.+...... .....|..+-+.+.. |.++..+........+.+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~-h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSK-HSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccc-cccccccCCccCCCcccc
Confidence 45799999999999999999886433 346777766554311 223346666666654 588999999999999999
Q ss_pred EEEEcC-CCCHHHHH-HHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEeeCCCCC-cEEEeecCCccc
Q 011882 81 LVIDLL-GPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKR 156 (475)
Q Consensus 81 lvme~~-g~sL~~ll-~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGlA~~ 156 (475)
+.+++. |+++.+.+ .......+...+-.++.|+..+|.|+| ..++.||||||+|.++. ..+ .+++.|||+|..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---ESGSALKIADFGLATA 174 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---cCCCcccCCCchhhcc
Confidence 999998 88888777 322225777888899999999999999 99999999999999994 556 899999999998
Q ss_pred ccc-cccccccccccCCCCcc-CccccccccccCCC-CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011882 157 YRD-TATHQHIPYRENKNLTG-TARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 233 (475)
Q Consensus 157 ~~~-~~~~~~~~~~~~~~~~G-T~~Y~APE~~~g~~-~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 233 (475)
+.. ..... .....+| ++.|+|||.+.+.. .....|+||.|+++.-+++|..||....... ..+......+
T Consensus 175 ~~~~~g~~~-----~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~--~~~~~~~~~~ 247 (601)
T KOG0590|consen 175 YRNKNGAER-----SLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD--GRYSSWKSNK 247 (601)
T ss_pred ccccCCcce-----eeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc--ccceeecccc
Confidence 877 32211 1233467 99999999999854 4788999999999999999999997643322 1122222211
Q ss_pred ccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 234 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 234 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
.. .....+..+.....+++.+++..+|..|.+..++
T Consensus 248 ~~-~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 248 GR-FTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred cc-cccCccccCChhhhhcccccccCCchhccccccc
Confidence 11 0112235677889999999999999999996655
No 435
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.55 E-value=2.2e-13 Score=142.00 Aligned_cols=140 Identities=20% Similarity=0.310 Sum_probs=96.0
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc------------------------------------------hHHH
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------------------------------------------PQLQ 50 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~------------------------------------------~~~~ 50 (475)
+.||+|++|+||+|+. .+|+.||||+.+..... -++.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5799999999999985 68999999987543210 0133
Q ss_pred HHHHHHHHHhCC---CCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHH-HHHHHHhCCc
Q 011882 51 YEAKLYKILQGG---STGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMIN-RVEFVHSKSF 125 (475)
Q Consensus 51 ~E~~il~~l~~~---~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~-aL~yLH~~gI 125 (475)
+|+..+..+... ++.+..-..+.......+|||||+ |.+|.++.......+. ...++.+++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 455545554321 122222222333344579999999 8888887653222232 3456666666 4788999999
Q ss_pred eecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 126 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 126 vHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+|+|+||.||++ ..++.++|+|||++..+..
T Consensus 279 ~H~D~hPgNilv---~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 279 FHADLHPGNIFV---LKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eeCCCCcccEEE---CCCCcEEEEeCCCeeECCH
Confidence 999999999999 4678999999999986643
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=4.9e-15 Score=153.16 Aligned_cols=254 Identities=17% Similarity=0.167 Sum_probs=188.6
Q ss_pred cCCceEEeeeEee--eCceeEEEEEE--ccCCeEEEEEEeccCCC----chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC
Q 011882 5 VGNKFRLGRKIGS--GSFGEIYLGTN--IQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG 76 (475)
Q Consensus 5 i~~~y~l~~~LG~--G~fG~Vy~a~~--~~~~~~vAvKi~~~~~~----~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~ 76 (475)
+.+.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... ...-.+|..-.+.+. .|.+.+..+......
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~-~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID-SHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC-ccccccccCcccccC
Confidence 3456778899999 99999999988 78889999996322211 122334444443333 346666667777888
Q ss_pred CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHhCCceecCCCCCcEEEeeCCCC-CcEEEeec
Q 011882 77 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN----RVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDF 151 (475)
Q Consensus 77 ~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~----aL~yLH~~gIvHrDIKP~NILl~~~~~~-~~vkL~DF 151 (475)
+..++-.|+|+.+|..+......-++...++.++.+... ||..+|+.+|+|-|+||+||++. .+ ..++++||
T Consensus 191 ~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~~~df 267 (524)
T KOG0601|consen 191 GILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCKLTDF 267 (524)
T ss_pred CcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceeecCCc
Confidence 999999999999999988765555888899999999999 99999999999999999999995 44 78999999
Q ss_pred CCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011882 152 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 231 (475)
Q Consensus 152 GlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~~~~~~~~~~~~~~i~~ 231 (475)
|+...+.+...... +.......|...|++||...+ -++..+|||+||.++.+..++..+...-......+ +.
T Consensus 268 ~~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-~r---- 339 (524)
T KOG0601|consen 268 GLVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-LR---- 339 (524)
T ss_pred ceeEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-cc----
Confidence 99998876543221 111223367888999999887 46889999999999999999877765432111111 11
Q ss_pred ccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 232 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 232 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
......++|.+...++...+..++..++-.|++.+.+..
T Consensus 340 --~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 --QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 111234567777888888999999999999988776543
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.48 E-value=3.6e-13 Score=124.59 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=101.4
Q ss_pred eeeEeeeCceeEEEEEEcc------CCeEEEEEEeccCC------------C------------chH----HHHHHHHHH
Q 011882 12 GRKIGSGSFGEIYLGTNIQ------TNEEVAIKLENVKT------------K------------HPQ----LQYEAKLYK 57 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~------~~~~vAvKi~~~~~------------~------------~~~----~~~E~~il~ 57 (475)
...||.|--+.||.|.... .+..+|||+.+... . ... ..+|.+.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998543 25799999754211 0 001 237888898
Q ss_pred HHhCCCCCcCeeEEeeEeCCEEEEEEEcCCCC-HH-HHHHHcCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCc
Q 011882 58 ILQGGSTGIPNLRWFGVEGDYNVLVIDLLGPS-LE-DLFNFCSRKLSLKTVLMLADQMINRVEFV-HSKSFLHRDIKPDN 134 (475)
Q Consensus 58 ~l~~~~~~i~~l~~~~~~~~~~~lvme~~g~s-L~-~ll~~~~~~ls~~~~~~i~~qi~~aL~yL-H~~gIvHrDIKP~N 134 (475)
.+......+|..+.+ ...+|||||++++ +. ..+. ...++..++..+..|++.+|..| |..||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 887755667777754 4578999999653 21 1222 22456667788899999999999 89999999999999
Q ss_pred EEEeeCCCCCcEEEeecCCccccc
Q 011882 135 FLMGLGRRANQVYIIDFGLAKRYR 158 (475)
Q Consensus 135 ILl~~~~~~~~vkL~DFGlA~~~~ 158 (475)
||+. ++.++|+|||.|....
T Consensus 156 IL~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEEE----CCcEEEEECCCceeCC
Confidence 9994 4679999999987554
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.46 E-value=3e-12 Score=135.41 Aligned_cols=145 Identities=18% Similarity=0.267 Sum_probs=92.2
Q ss_pred CceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc----------------------------------------
Q 011882 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---------------------------------------- 46 (475)
Q Consensus 7 ~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---------------------------------------- 46 (475)
..|+. +.||+|++|+||+|+.+.+|+.||||+.......
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 7899999999999998777999999997643100
Q ss_pred --hHHHHHHHHHHHHhCC---CCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCC-----CCHHHHHHHHHHHHH
Q 011882 47 --PQLQYEAKLYKILQGG---STGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRK-----LSLKTVLMLADQMIN 115 (475)
Q Consensus 47 --~~~~~E~~il~~l~~~---~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~-----ls~~~~~~i~~qi~~ 115 (475)
-++.+|......+... .+.+..-..|.......+|||||+ |..|.++-...... +....+..++.||
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 0134455444444321 111111122333355678999999 88887753211222 3333333344444
Q ss_pred HHHHHHhCCceecCCCCCcEEEeeC-CCCCcEEEeecCCcccccc
Q 011882 116 RVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 116 aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGlA~~~~~ 159 (475)
+..|++|+|+||.||++..+ ...+.++++|||++..+..
T Consensus 277 -----f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -----FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 46999999999999999522 1123899999999987644
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=6.1e-13 Score=120.26 Aligned_cols=126 Identities=20% Similarity=0.286 Sum_probs=95.4
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCC-CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCC
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPS 89 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~s 89 (475)
++.|+.|.++.||++.. .++.|+||+..... .......|..+++.+... ..++.++.+.. ...++|||++ |.+
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~-~~~P~~~~~~~--~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEA-GIGPKLYYFDP--ETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh-CCCCceEEEeC--CCCeEEEEecCCCc
Confidence 46789999999999985 47889999875543 234578899999998764 44666666543 3357999999 656
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 90 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-----LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 90 L~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gI-----vHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
+.+. . .....++.+++.+|..||..++ +|+|++|.|||++ .+.++|+|||.+.
T Consensus 78 l~~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~ 135 (170)
T cd05151 78 LLTE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAG 135 (170)
T ss_pred cccc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEeccccc
Confidence 5432 0 1123467899999999999885 9999999999994 4579999999885
No 440
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.34 E-value=1.3e-11 Score=110.64 Aligned_cols=142 Identities=18% Similarity=0.242 Sum_probs=105.6
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEecc-CCCch---------HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-KTKHP---------QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~-~~~~~---------~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
.+..|-+|+-+.|+++.+ .|+.++||.--. .-.++ +...|++++..+..--...|.+ +..+....+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l--~~~D~~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRL--IFIDTYGGQ 86 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE--EEEecCCCe
Confidence 677889999999999984 788889995222 22222 3567899988887632334444 445555667
Q ss_pred EEEEcCCC--CHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 81 LVIDLLGP--SLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 81 lvme~~g~--sL~~ll~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
|+|||+.+ ++.+++...-.. ........++.+|-+.|.-||..+|||+||..+||+|..++....+.|+|||++..
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99999965 888887644333 33334478889999999999999999999999999997655566679999999864
No 441
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=1.3e-11 Score=111.05 Aligned_cols=128 Identities=24% Similarity=0.397 Sum_probs=94.8
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCC-Cch---------HHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHP---------QLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~---------~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lv 82 (475)
..|++|+-+.||.+.+ -|..+++|.--.+. .++ ...+|++++..+.. ..++.-..+..+.+...|+
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~--~GV~~P~v~dvD~~~~~I~ 77 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKARE--AGVPVPIVYDVDPDNGLIV 77 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCeEEEEcCCCCEEE
Confidence 4678999999999975 45568888533222 222 35678899888877 3454445566667777899
Q ss_pred EEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 83 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 83 me~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
|||. |..|.+++... ...++..+-.-+.-||..||||+||.++||+++ .+.++++||||+..
T Consensus 78 me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~ 140 (204)
T COG3642 78 MEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEF 140 (204)
T ss_pred EEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccc
Confidence 9999 66777788743 245566666677889999999999999999994 44599999999973
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.25 E-value=2.8e-12 Score=139.36 Aligned_cols=271 Identities=19% Similarity=0.172 Sum_probs=186.6
Q ss_pred CCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc-----hHHHHHHHHHHHHhCCCCCcCeeEEe---eEeCC
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGSTGIPNLRWF---GVEGD 77 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~-----~~~~~E~~il~~l~~~~~~i~~l~~~---~~~~~ 77 (475)
.+.+.+++-+-+|.++.++.+.-..+|...++|+.....+- .....+..++ .++..+.+..+ .....
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~-----i~p~~P~v~~~~~s~~~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNIL-----ITPRSPAVVRSFPSFPCRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcc-----ccCCCCceecccCCCCCCC
Confidence 45688888999999999999987677766666654332211 0111111110 00222333222 23456
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
..+|+|+|+ +++|...+.. ....+.+-....+..+..+++|||...++|||+||.|+|+ ...+..++.|||....
T Consensus 878 P~~L~~~~~~~~~~~Skl~~-~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHN-SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSK 953 (1205)
T ss_pred CcchhhHHhccCCchhhhhc-CCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccc
Confidence 678999999 7788888773 3357777778888899999999999999999999999999 4788999999984443
Q ss_pred cccc---ccc---------------------cccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCC
Q 011882 157 YRDT---ATH---------------------QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSL 212 (475)
Q Consensus 157 ~~~~---~~~---------------------~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~ 212 (475)
...- ... .....+......||+.|.+||...+......+|+|++|++++|.++|..
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 2110 000 0001123445689999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccc
Q 011882 213 PWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWT 292 (475)
Q Consensus 213 Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~ 292 (475)
||... +..+.++.+.......+ ......+.+.++++...+..++.+|-.+.-- ....+-.+....+|+
T Consensus 1034 p~na~---tpq~~f~ni~~~~~~~p--~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~-------~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1034 PFNAE---TPQQIFENILNRDIPWP--EGPEEGSYEAQDLINRLLTEEPTQRLGAKGA-------AEVKGHPFFQDVDWE 1101 (1205)
T ss_pred CCCCc---chhhhhhccccCCCCCC--CCccccChhhhhhhhhhhccCchhccCcccc-------cccccCCccCCCCcc
Confidence 99764 34455555555444322 1223356889999999999999999775422 223445666778998
Q ss_pred ccccc
Q 011882 293 ILKYQ 297 (475)
Q Consensus 293 ~~~~~ 297 (475)
.+..+
T Consensus 1102 ~l~~q 1106 (1205)
T KOG0606|consen 1102 NLALQ 1106 (1205)
T ss_pred ccccc
Confidence 77544
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.21 E-value=1e-10 Score=110.05 Aligned_cols=139 Identities=19% Similarity=0.279 Sum_probs=103.5
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC---CEEEEEEEcC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG---DYNVLVIDLL 86 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~---~~~~lvme~~ 86 (475)
+.|+.|.++.||++.. .+|+.++||+...... ...+..|.+++..+......++.+..+.... +..+++||++
T Consensus 4 ~~l~~G~~n~~~~v~~-~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTA-GGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEe-cCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 5689999999999985 3368899998765432 4578999999999987545577777776653 2568999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 011882 87 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS------------------------------------------- 122 (475)
Q Consensus 87 -g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~------------------------------------------- 122 (475)
|.+|.+.+. ...++......++.+++..|..||+
T Consensus 83 ~G~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLL--RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCC--CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 666665442 1346677777777788888877773
Q ss_pred -------------CCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 123 -------------KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 123 -------------~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
..++|+|++|.|||++.+ ..+.+.|+||+.+.
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~ 205 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccc
Confidence 236899999999999521 14568999999885
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1.3e-11 Score=127.98 Aligned_cols=241 Identities=19% Similarity=0.142 Sum_probs=166.8
Q ss_pred CCceEEeeeEeeeCceeEEEEEEc-cCCeEEEEEEeccCCCc--hH--HHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEE
Q 011882 6 GNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKTKH--PQ--LQYEAKLYKILQGGSTGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 6 ~~~y~l~~~LG~G~fG~Vy~a~~~-~~~~~vAvKi~~~~~~~--~~--~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~ 80 (475)
..+|.++.+||.|.|+.|+.+... .++..|++|-+...... .+ -..|+-+...+..+ .+++.+...+......|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~-~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSH-LPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcc-cccCCCCCCcccccccc
Confidence 467899999999999999998744 57788999954332211 11 23455555566554 55666444444555556
Q ss_pred EEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 81 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 81 lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
+-.||| ++++...+ .....+++...+.+..|++.++.++|+..++|+|+||+||++. ++.+..++.|||.++.+.-
T Consensus 343 ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~--~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILIS--NDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred CchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeec--cchhhhhccccccccccce
Confidence 899999 66665544 3455688999999999999999999999999999999999996 2227789999999975322
Q ss_pred cccccccccccCCCCccCcccc--ccccccCCCCCCchhHHHHHHHHHHHHcCC-CCCCCCCCCCHHHHHHHHhhccccc
Q 011882 160 TATHQHIPYRENKNLTGTARYA--SMNTHLGIEQSRRDDLESLGYVLMYFLRGS-LPWQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 160 ~~~~~~~~~~~~~~~~GT~~Y~--APE~~~g~~~s~ksDIwSlG~iL~elltG~-~Pf~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
.. ..+.+..+++ +++......+..+.|++|||..+.+.+++. +++.+... ..+....
T Consensus 420 ~~----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-------~~i~~~~--- 479 (524)
T KOG0601|consen 420 SS----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-------LTIRSGD--- 479 (524)
T ss_pred ec----------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-------eeeeccc---
Confidence 11 1223344444 555556667899999999999999999985 44443211 1111111
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 272 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 272 (475)
.+ ...+...++..+.+.+...++..||.+.++..
T Consensus 480 -~p-~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 480 -TP-NLPGLKLQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred -cc-CCCchHHhhhhhhhhhcCCccccchhhhhhcc
Confidence 11 11333477888899999999999998776643
No 445
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.16 E-value=1.4e-09 Score=105.97 Aligned_cols=135 Identities=19% Similarity=0.131 Sum_probs=98.4
Q ss_pred CceeEEEEEEccCCeEEEEEEeccCCC-----------ch--HHHHHHHHHHHHhCCCCCcCeeEEeeEe-----CCEEE
Q 011882 19 SFGEIYLGTNIQTNEEVAIKLENVKTK-----------HP--QLQYEAKLYKILQGGSTGIPNLRWFGVE-----GDYNV 80 (475)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAvKi~~~~~~-----------~~--~~~~E~~il~~l~~~~~~i~~l~~~~~~-----~~~~~ 80 (475)
....|+.+. -.|+.|.||....... .+ ...+|...+..|.......|....+++. ....+
T Consensus 34 ~~rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 34 EGRRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred CCceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 334466654 3678899996533221 11 3678999888886643555666666653 23578
Q ss_pred EEEEcCCC--CHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeC----CCCCcEEEeecCC
Q 011882 81 LVIDLLGP--SLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG----RRANQVYIIDFGL 153 (475)
Q Consensus 81 lvme~~g~--sL~~ll~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~----~~~~~vkL~DFGl 153 (475)
||||++++ +|.+++... ....+......++.+|+..+.-||..||+|+|+++.||||..+ +....+.|+||+.
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 99999954 799998632 3446677888999999999999999999999999999999631 2356899999998
Q ss_pred cc
Q 011882 154 AK 155 (475)
Q Consensus 154 A~ 155 (475)
+.
T Consensus 192 ~~ 193 (268)
T PRK15123 192 AQ 193 (268)
T ss_pred cc
Confidence 85
No 446
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.14 E-value=5.2e-10 Score=117.35 Aligned_cols=183 Identities=17% Similarity=0.162 Sum_probs=131.9
Q ss_pred eEEeeeEeeeCceeEE-EEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEc
Q 011882 9 FRLGRKIGSGSFGEIY-LGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDL 85 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy-~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~ 85 (475)
|.| ...+-++.+ || .|..+.++.+|.|...+.... .....+-++-++.++| |+|..++...+..+..|||.|-
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRH--P~Il~yL~t~e~~~~~ylvTEr 90 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRH--PNILSYLDTTEEEGTLYLVTER 90 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccC--chhhhhhhhhcccCceEEEeec
Confidence 555 333334443 44 466678899999998876655 3445666677777776 9999999999999999999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccc
Q 011882 86 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 164 (475)
Q Consensus 86 ~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~ 164 (475)
+-+ |...++. +....+...+.||+.||.||| +++++|++|.-+-|+| +..|..||++|-++..........
T Consensus 91 V~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~~ 162 (690)
T KOG1243|consen 91 VRP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAPA 162 (690)
T ss_pred ccc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCccc
Confidence 843 5556653 336777888999999999998 6789999999999999 588999999999886544322100
Q ss_pred ccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCC
Q 011882 165 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSL 212 (475)
Q Consensus 165 ~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~ 212 (475)
....---.|..|+.+.... -..|.|-|||+++|++.|.+
T Consensus 163 -------~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 163 -------KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred -------ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 0111122355565543222 35699999999999999933
No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=8.4e-11 Score=113.49 Aligned_cols=203 Identities=11% Similarity=0.128 Sum_probs=131.0
Q ss_pred HHHHHHHHhCCCCCcCeeEEeeEeCC-----EEEEEEEcC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh
Q 011882 52 EAKLYKILQGGSTGIPNLRWFGVEGD-----YNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHS 122 (475)
Q Consensus 52 E~~il~~l~~~~~~i~~l~~~~~~~~-----~~~lvme~~-g~sL~~ll~~---~~~~ls~~~~~~i~~qi~~aL~yLH~ 122 (475)
+.-+-.+++..|.+++.++.|..+.. ...++.||+ -++|..++++ +...+..+...+|+.||+.||.|||+
T Consensus 115 ~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs 194 (458)
T KOG1266|consen 115 RAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS 194 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc
Confidence 33344444544567888766665443 467888999 8899998864 34558899999999999999999998
Q ss_pred CC--ceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHH
Q 011882 123 KS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 200 (475)
Q Consensus 123 ~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSl 200 (475)
.. |+|+++..+-|++ ..++.||+.---... ..... ......+...-.+-+.|.+||.=.....+.++|||+|
T Consensus 195 ~~PpiihgnlTc~tifi---q~ngLIkig~~ap~s-~h~s~--~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~f 268 (458)
T KOG1266|consen 195 CDPPIIHGNLTCDTIFI---QHNGLIKIGSVAPDS-THPSV--NSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKF 268 (458)
T ss_pred cCCccccCCcchhheee---cCCceEEecccCccc-cchhh--hhhhHhhhhccccCCccccCCcCcccccccchhhhhh
Confidence 74 9999999999999 466766653211100 00000 0000112223356788999998776667889999999
Q ss_pred HHHHHHHHcCCCCCC-CCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011882 201 GYVLMYFLRGSLPWQ-GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 271 (475)
Q Consensus 201 G~iL~elltG~~Pf~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 271 (475)
|+..+||..+..--. ........+.+..... .+. ..--+.++..|++-.|..||++.+++
T Consensus 269 gmcAlemailEiq~tnseS~~~~ee~ia~~i~--------~le---n~lqr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 269 GMCALEMAILEIQSTNSESKVEVEENIANVII--------GLE---NGLQRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred hHHHHHHHHheeccCCCcceeehhhhhhhhee--------ecc---CccccCcCcccccCCCCCCcchhhhh
Confidence 999999998765321 1111111111111100 000 12235688999999999999988763
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.10 E-value=1.5e-09 Score=108.15 Aligned_cols=256 Identities=13% Similarity=0.176 Sum_probs=157.4
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCe-e------EEeeEeCCEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPN-L------RWFGVEGDYNVL 81 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~-l------~~~~~~~~~~~l 81 (475)
..+.+.||+|+-+.+|-.-. -+ ..+-|+.....-..+.+ ..+.+...- .++.+.. + .+-...+....+
T Consensus 13 i~~gr~LgqGgea~ly~l~e--~~-d~VAKIYh~Pppa~~aq-k~a~la~~p-~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGE--VR-DQVAKIYHAPPPAAQAQ-KVAELAATP-DAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred cCCCccccCCccceeeecch--hh-chhheeecCCCchHHHH-HHHHhccCC-CCcchhhhhcccHHHhhCCCccceeEE
Confidence 34578899999999997542 12 23457654332221111 111111111 1111111 1 111233444778
Q ss_pred EEEcC-CC-CHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 82 VIDLL-GP-SLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 82 vme~~-g~-sL~~ll~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
.|..+ |. .+..++.-. -..+.+..+++.++.|+.+.+.||+.|.+-+|+.++|||++ +++.|.|+|=..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcccce
Confidence 88887 33 333333211 12378999999999999999999999999999999999995 6788888885433
Q ss_pred ccccccccccccccccCCCCccCcccccccccc-----CCCCCCchhHHHHHHHHHHHHcC-CCCCCCCCCCC----HHH
Q 011882 155 KRYRDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGT----KKQ 224 (475)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----g~~~s~ksDIwSlG~iL~elltG-~~Pf~~~~~~~----~~~ 224 (475)
....+... ...-+|...|.+||.-. |.+-+...|.|.||+++++++.| .+||.|..... ..+
T Consensus 165 qi~~ng~~--------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E 236 (637)
T COG4248 165 QINANGTL--------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE 236 (637)
T ss_pred eeccCCce--------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch
Confidence 32211111 12347899999999754 44567889999999999999986 99998753211 111
Q ss_pred -HHHH--------HhhccccccHHHHhcCChHHHHHHHHHHhcCC--CCCCCCHHHHHHHHHHHHHH
Q 011882 225 -KYEK--------ISEKKVSTSIEALCRGYPTEFASYFHYCRSLR--FDDKPDYAYLKRLFRDLFIR 280 (475)
Q Consensus 225 -~~~~--------i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~d--p~~RPt~~~l~~~L~~l~~~ 280 (475)
.+.. -.....+.+.+.-+.-+|+.+..|+.+|+..- +.-||+++..+..|..+-.+
T Consensus 237 ~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 237 TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 0100 00011111111112346899999999999643 56899998887777766543
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.06 E-value=5.3e-10 Score=103.05 Aligned_cols=125 Identities=26% Similarity=0.395 Sum_probs=80.5
Q ss_pred eEEEEEEccCCeEEEEEEeccCC--------------C---------c-----hHHHHHHHHHHHHhCCCCCcCeeEEee
Q 011882 22 EIYLGTNIQTNEEVAIKLENVKT--------------K---------H-----PQLQYEAKLYKILQGGSTGIPNLRWFG 73 (475)
Q Consensus 22 ~Vy~a~~~~~~~~vAvKi~~~~~--------------~---------~-----~~~~~E~~il~~l~~~~~~i~~l~~~~ 73 (475)
.||.|.. ..|..||||+..... . . ....+|.+.|..+....-++|.++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899985 678899999754311 0 0 125678888988877545677776543
Q ss_pred EeCCEEEEEEEcCC--C-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH-HHhCCceecCCCCCcEEEeeCCCCCcEEEe
Q 011882 74 VEGDYNVLVIDLLG--P-SLEDLFNFCSRKLSLKTVLMLADQMINRVEF-VHSKSFLHRDIKPDNFLMGLGRRANQVYII 149 (475)
Q Consensus 74 ~~~~~~~lvme~~g--~-sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~y-LH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 149 (475)
..+|||||++ + .+..+.. . .++......++.+++..+.. +|..||||+||.+.|||++ .+.++|+
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~-~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~~~~iI 148 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKD-V--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DGKVYII 148 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHH-C--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TTCEEE-
T ss_pred ----CCEEEEEecCCCccchhhHHh-c--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cceEEEE
Confidence 3579999996 5 3333332 1 22245567788888886655 5799999999999999995 3489999
Q ss_pred ecCCccccc
Q 011882 150 DFGLAKRYR 158 (475)
Q Consensus 150 DFGlA~~~~ 158 (475)
|||.|....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999987543
No 450
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.90 E-value=3.1e-08 Score=93.04 Aligned_cols=111 Identities=19% Similarity=0.280 Sum_probs=87.2
Q ss_pred chHHHHHHHHHHHHhCCCCCcCeeEEeeEeC----CEEEEEEEcC-C-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Q 011882 46 HPQLQYEAKLYKILQGGSTGIPNLRWFGVEG----DYNVLVIDLL-G-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 119 (475)
Q Consensus 46 ~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~----~~~~lvme~~-g-~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~y 119 (475)
.....+|...+..|.......|....+++.. ...+|++|++ + .+|.+++..... .+......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 3467889998888876546667777776653 2458899998 4 379999874332 6777888999999999999
Q ss_pred HHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 120 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 120 LH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
||++||+|+|+++.|||+..++....+.|+||+.++..
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999964443458999999988743
No 451
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=1.3e-09 Score=114.88 Aligned_cols=154 Identities=12% Similarity=0.198 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCCcEEEeecCCccccccccccccccccc--CCCCccCccccccccc
Q 011882 110 ADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE--NKNLTGTARYASMNTH 186 (475)
Q Consensus 110 ~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~--~~~~~GT~~Y~APE~~ 186 (475)
+.+++.||.|+|. .++||++|.|++|.+ +..+.+||+.|+++........-....|.. .....-...|.|||++
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3455699999996 689999999999999 688999999999987654432211111111 1122346679999999
Q ss_pred cCCCCCCchhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCC
Q 011882 187 LGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP 265 (475)
Q Consensus 187 ~g~~~s~ksDIwSlG~iL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP 265 (475)
.+...+.++|+|||||.+|.+.. |+.-+..... ........ ............++|+++.+-+.+++..+..-||
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~---~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSR---NLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhh---cccccccccccccCcHHHHHHHHHHhcCCcccCc
Confidence 99888999999999999999985 4444433211 11111111 1111111112257899999999999999999999
Q ss_pred CHHHH
Q 011882 266 DYAYL 270 (475)
Q Consensus 266 t~~~l 270 (475)
++.++
T Consensus 258 ~~~~l 262 (700)
T KOG2137|consen 258 TLDLL 262 (700)
T ss_pred chhhh
Confidence 76554
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.73 E-value=4.1e-07 Score=84.78 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=101.4
Q ss_pred eeeCceeEEEEEEccCCeEEEEEEecc--------CCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEe----CCEEEEEE
Q 011882 16 GSGSFGEIYLGTNIQTNEEVAIKLENV--------KTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVE----GDYNVLVI 83 (475)
Q Consensus 16 G~G~fG~Vy~a~~~~~~~~vAvKi~~~--------~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~----~~~~~lvm 83 (475)
|.||.+-|+.... .|+.+=||.-.. ....+.+.+|...+..|......++.+..+... .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 5689999998763 444677884321 123457999999999998754556666644332 22358899
Q ss_pred EcCC--CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCccc
Q 011882 84 DLLG--PSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 84 e~~g--~sL~~ll~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
|-++ .+|.+++.... .+.+......++.+|+..|.-||+.|+.|+|+-+.|||+..+ ....|+++||--++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccch
Confidence 9886 69999875321 246777888999999999999999999999999999999422 123499999987764
No 453
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.71 E-value=9.7e-07 Score=90.61 Aligned_cols=210 Identities=18% Similarity=0.210 Sum_probs=145.0
Q ss_pred ceeEEEEEEccCCeEEEEEEeccCCC--chHHHHHHHHHHHHhCCCCCcCeeEEeeE----eCCEEEEEEEcC--CCCHH
Q 011882 20 FGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGSTGIPNLRWFGV----EGDYNVLVIDLL--GPSLE 91 (475)
Q Consensus 20 fG~Vy~a~~~~~~~~vAvKi~~~~~~--~~~~~~E~~il~~l~~~~~~i~~l~~~~~----~~~~~~lvme~~--g~sL~ 91 (475)
-.+.|++....+|..|++|.+..... ......-++.++.+.| .+++.+..++. .+...++|++|. .++|.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h--~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCH--TNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhcc--CceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 35789999999999999998743221 1123445667777776 88888765544 445679999998 56888
Q ss_pred HHHHHc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 92 DLFNFC--------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 92 ~ll~~~--------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
++.-.. +.+.++..++.++.|+..||.++|+.|+.-+-|.|.+||+. ....++|.--|+...+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEecccceeee
Confidence 765211 23477899999999999999999999999999999999994 4447888777766544
Q ss_pred cccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCC-CCCCCCCCHHHHHHHHhhccccc
Q 011882 158 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQKYEKISEKKVST 236 (475)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~P-f~~~~~~~~~~~~~~i~~~~~~~ 236 (475)
..+.. |.+.+ -.+-|.=.||.+++.|.+|..- |.. +. .+. .
T Consensus 444 ~~d~~---------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~--d~--~~~----------s 485 (655)
T KOG3741|consen 444 QEDPT---------------------EPLES---QQQNDLRDLGLLLLALATGTENSNRT--DS--TQS----------S 485 (655)
T ss_pred cCCCC---------------------cchhH---HhhhhHHHHHHHHHHHhhcccccccc--cc--hHH----------H
Confidence 33210 11111 2367999999999999998543 221 11 111 1
Q ss_pred cHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011882 237 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 273 (475)
Q Consensus 237 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 273 (475)
.+..+...++.++++++.+....++++ -++.+++..
T Consensus 486 ~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 486 HLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 123344567788899999999888886 455555433
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.70 E-value=1.5e-07 Score=88.08 Aligned_cols=138 Identities=18% Similarity=0.271 Sum_probs=91.8
Q ss_pred CccCCceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchH-----------HHHHHHHHHHHhC-CCCCcCeeE
Q 011882 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-----------LQYEAKLYKILQG-GSTGIPNLR 70 (475)
Q Consensus 3 ~~i~~~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~-----------~~~E~~il~~l~~-~~~~i~~l~ 70 (475)
..+.++|++.+.+-......|.+.. .+|+.+++|.........+ ..++......+.. +......++
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 3567899999999998888888876 5788999997655432211 2223333333322 112222212
Q ss_pred EeeE-----eCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCC
Q 011882 71 WFGV-----EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 144 (475)
Q Consensus 71 ~~~~-----~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 144 (475)
...+ .....+|+|||+ |..|.++.. +++ .++..|.++|.-||+.|++|+|+.|.||++. ++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~ 171 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NN 171 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CC
Confidence 2211 234457899999 767766543 222 3556778889999999999999999999994 45
Q ss_pred cEEEeecCCcc
Q 011882 145 QVYIIDFGLAK 155 (475)
Q Consensus 145 ~vkL~DFGlA~ 155 (475)
.++++||+..+
T Consensus 172 ~i~iID~~~k~ 182 (229)
T PF06176_consen 172 GIRIIDTQGKR 182 (229)
T ss_pred cEEEEECcccc
Confidence 69999998765
No 455
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.65 E-value=6.3e-07 Score=85.42 Aligned_cols=72 Identities=18% Similarity=0.146 Sum_probs=57.6
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcCCC
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLLGP 88 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~g~ 88 (475)
.+||+|..+.||+. .+..+++|+.........+.+|.+++..+......++.++.++...+...++|+++.|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 57899999999984 2456889987765555678999999999986434578888888888888999999944
No 456
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=2.2e-07 Score=83.36 Aligned_cols=128 Identities=26% Similarity=0.414 Sum_probs=97.4
Q ss_pred EEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 10 ~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
++.+.|++|.+|.||+|.+ .|..+|+|+-..+.....+..|++++..++.. ..-+.++.|+.+. +.|||. |.
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~-~~~p~vy~yg~~~----i~me~i~G~ 97 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGE-GVTPEVYFYGEDF----IRMEYIDGR 97 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhc-CCCceEEEechhh----hhhhhhcCc
Confidence 3467899999999999996 56799999998888888999999999999986 6778888887654 449999 66
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC--CcEEEeeCCCCCcEEEeecCCccc
Q 011882 89 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP--DNFLMGLGRRANQVYIIDFGLAKR 156 (475)
Q Consensus 89 sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP--~NILl~~~~~~~~vkL~DFGlA~~ 156 (475)
.|.++... .+.+.++. +++.---|-..||-|..|.- .||++ .++.+.|+||..|+.
T Consensus 98 ~L~~~~~~----~~rk~l~~----vlE~a~~LD~~GI~H~El~~~~k~vlv----~~~~~~iIDFd~At~ 155 (201)
T COG2112 98 PLGKLEIG----GDRKHLLR----VLEKAYKLDRLGIEHGELSRPWKNVLV----NDRDVYIIDFDSATF 155 (201)
T ss_pred chhhhhhc----ccHHHHHH----HHHHHHHHHHhccchhhhcCCceeEEe----cCCcEEEEEccchhh
Confidence 88887652 13333333 34443445567899988864 46666 445899999999974
No 457
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.62 E-value=2.7e-07 Score=88.15 Aligned_cols=134 Identities=20% Similarity=0.349 Sum_probs=96.1
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----------------Cc--------hHHHHHHHHHHHHhCCCC
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----------------KH--------PQLQYEAKLYKILQGGST 64 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----------------~~--------~~~~~E~~il~~l~~~~~ 64 (475)
+.++.+||.|--+.||.|.+ ..|.++|||+-+... .+ ...++|.++|..|...--
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 45788999999999999996 478899999632110 00 125678888888876323
Q ss_pred CcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC
Q 011882 65 GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 143 (475)
Q Consensus 65 ~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 143 (475)
.+|... ..+..++|||+. |.-|..+ +++.+..-.|+..|+.-+.-+-..||||+|+.+=|||++ ++
T Consensus 172 ~VP~P~----~~nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~d 238 (304)
T COG0478 172 KVPKPI----AWNRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---ED 238 (304)
T ss_pred CCCCcc----ccccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---cC
Confidence 455432 345678999999 4444322 224455566666777777766789999999999999994 78
Q ss_pred CcEEEeecCCccc
Q 011882 144 NQVYIIDFGLAKR 156 (475)
Q Consensus 144 ~~vkL~DFGlA~~ 156 (475)
|.++++||=-+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 8999999977654
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.59 E-value=2.5e-07 Score=97.70 Aligned_cols=141 Identities=20% Similarity=0.306 Sum_probs=94.0
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc------------------------------------------hHHH
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------------------------------------------PQLQ 50 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~------------------------------------------~~~~ 50 (475)
..|+.++-|+||.|+. .+|+.||||+....-.. -++.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 5688999999999995 66999999985432110 0134
Q ss_pred HHHHHHHHHhC---CCCCcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCce
Q 011882 51 YEAKLYKILQG---GSTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 126 (475)
Q Consensus 51 ~E~~il~~l~~---~~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIv 126 (475)
+|+..+..+.. ..+.+..-..|.+-....+|+|||+ |-.+.++.......++.+.+...+.++. +..+-..|++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgff 287 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCcc
Confidence 55555555543 1222222233444456678999999 7688777433334566555544444333 3444458999
Q ss_pred ecCCCCCcEEEeeCCCCCcEEEeecCCcccccc
Q 011882 127 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 159 (475)
Q Consensus 127 HrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~ 159 (475)
|.|..|.||++ +.++.+.+.|||+...+..
T Consensus 288 HaDpHpGNi~v---~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 288 HADPHPGNILV---RSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccCCCccceEE---ecCCcEEEEcCcceecCCH
Confidence 99999999999 5779999999999987654
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.59 E-value=5.6e-07 Score=85.16 Aligned_cols=134 Identities=22% Similarity=0.276 Sum_probs=92.0
Q ss_pred eEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---------------------h-----HHHHHHHHHHHHhCCCCCcC
Q 011882 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---------------------P-----QLQYEAKLYKILQGGSTGIP 67 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---------------------~-----~~~~E~~il~~l~~~~~~i~ 67 (475)
.|..|--+.||+|.. .++..||||+.+..... . -...|..-|..+....-.+|
T Consensus 55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 455566669999984 67889999986543211 0 13456666666655334444
Q ss_pred eeEEeeEeCCEEEEEEEcCCCCHH--HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEeeCCCCC
Q 011882 68 NLRWFGVEGDYNVLVIDLLGPSLE--DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRAN 144 (475)
Q Consensus 68 ~l~~~~~~~~~~~lvme~~g~sL~--~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~ 144 (475)
.-+.+ ..++|||||+|.... -.++ .-.+...+...+..++++.+.-|-. .++||+||..=|||+. .+
T Consensus 134 ~Pi~~----~~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~----~~ 203 (268)
T COG1718 134 EPIAF----RNNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH----DG 203 (268)
T ss_pred Cceee----cCCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE----CC
Confidence 43332 246899999966511 0111 1124444788889999999998887 9999999999999993 68
Q ss_pred cEEEeecCCccccc
Q 011882 145 QVYIIDFGLAKRYR 158 (475)
Q Consensus 145 ~vkL~DFGlA~~~~ 158 (475)
.++|+|||-|....
T Consensus 204 ~p~iID~~QaV~~~ 217 (268)
T COG1718 204 EPYIIDVSQAVTID 217 (268)
T ss_pred eEEEEECccccccC
Confidence 89999999997554
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.52 E-value=1.5e-06 Score=82.12 Aligned_cols=140 Identities=18% Similarity=0.274 Sum_probs=82.7
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeE---eCCEEEEEEEcC-C
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGV---EGDYNVLVIDLL-G 87 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~---~~~~~~lvme~~-g 87 (475)
++.|+.|..+.||++.... ..++||+.........+..|..+++.+......++.++.++. .....+++|+++ |
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 5789999999999998533 589999865543345788999999999764334677776443 445678999998 6
Q ss_pred CCHHH----------------HHH---HcC---CCCCHHH---------HHHH------------HHHHHH-HHHHHHh-
Q 011882 88 PSLED----------------LFN---FCS---RKLSLKT---------VLML------------ADQMIN-RVEFVHS- 122 (475)
Q Consensus 88 ~sL~~----------------ll~---~~~---~~ls~~~---------~~~i------------~~qi~~-aL~yLH~- 122 (475)
..+.. .+. ... ..+.... .... ...+.. .+..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 66665 111 110 0111000 0000 111222 2333332
Q ss_pred ------CCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 123 ------KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 123 ------~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
..++|+|+.|.|||++ ..++.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~--~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVD--PSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEE--SSTTEEEE--GTT-E
T ss_pred hccCCCcEEEEeccccccceee--eccceeEEEecccce
Confidence 4599999999999995 355666899999874
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.43 E-value=3.7e-06 Score=80.85 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=56.1
Q ss_pred EeeeCc-eeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCCHHH
Q 011882 15 IGSGSF-GEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPSLED 92 (475)
Q Consensus 15 LG~G~f-G~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL~~ 92 (475)
|-.|.. ..||+... .+..++||+..... ...+..|+++++.+... ..+|.++.++...+..++||+++ |.+|..
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~-~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP-TYELEREAERLRWLAGK-LPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc-ccchHHHHHHHHHHHhc-CCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 445555 78999874 34688999865543 45688999999999876 66888888887777789999998 666654
Q ss_pred H
Q 011882 93 L 93 (475)
Q Consensus 93 l 93 (475)
.
T Consensus 82 ~ 82 (244)
T cd05150 82 L 82 (244)
T ss_pred h
Confidence 3
No 462
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.31 E-value=2e-05 Score=73.28 Aligned_cols=130 Identities=22% Similarity=0.308 Sum_probs=96.1
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCC------------------CchHHHHHHHHHHHHh-C---CCCCcCee
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT------------------KHPQLQYEAKLYKILQ-G---GSTGIPNL 69 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~------------------~~~~~~~E~~il~~l~-~---~~~~i~~l 69 (475)
...||+|+.-.||.- ..+...+||+..... ...+..+|...+..+. . ...+|+.+
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 357899999999973 345567899877654 2356778888887777 3 23667888
Q ss_pred EEeeEeCCEEEEEEEcC-------CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCC
Q 011882 70 RWFGVEGDYNVLVIDLL-------GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 142 (475)
Q Consensus 70 ~~~~~~~~~~~lvme~~-------g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 142 (475)
+++.+.+.-..+|+|.. ..+|.+++. ...++. .+...+. .-..||-+.+|+.+||+|.||++...++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--~~~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLK--EGGLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHH--cCCccH-HHHHHHH---HHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 88888888889999977 447888885 334655 3333333 3446788999999999999999987655
Q ss_pred CC-cEEEee
Q 011882 143 AN-QVYIID 150 (475)
Q Consensus 143 ~~-~vkL~D 150 (475)
.. .+.|+|
T Consensus 157 ~~~~lvlID 165 (199)
T PF10707_consen 157 GEFRLVLID 165 (199)
T ss_pred CceEEEEEe
Confidence 55 788888
No 463
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.24 E-value=5.1e-06 Score=87.67 Aligned_cols=143 Identities=20% Similarity=0.312 Sum_probs=93.1
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCc---------------------------------------hHHHHHH
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---------------------------------------PQLQYEA 53 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~---------------------------------------~~~~~E~ 53 (475)
+.||.-+.|+||+|+- .+|+.||||+-+..-.. -++..|+
T Consensus 167 ~piaaASlaQVhrA~L-~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARL-KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEe-cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 5789999999999995 56999999974332110 0133344
Q ss_pred HHHHHHhC--CCCC------cCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011882 54 KLYKILQG--GSTG------IPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 124 (475)
Q Consensus 54 ~il~~l~~--~~~~------i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~g 124 (475)
+....+.. .+.. ||.+++. .....+|+|||| |..+.++-.-....++...+..-+.++.. +.|-..|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~G 321 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTG 321 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcC
Confidence 43333322 1122 4444443 344578999999 66666654434556887766665555443 3344578
Q ss_pred ceecCCCCCcEEEeeC-CCCCcEEEeecCCccccccc
Q 011882 125 FLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRDT 160 (475)
Q Consensus 125 IvHrDIKP~NILl~~~-~~~~~vkL~DFGlA~~~~~~ 160 (475)
++|+|-.|.||++..+ ..+..+.+.|||+...+...
T Consensus 322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred CccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 9999999999999632 24678999999999876543
No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.14 E-value=1.3e-05 Score=76.66 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=49.3
Q ss_pred eeeEeeeCce-eEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCC-CCCcCeeEEeeEeC---CEEEEEEEcC
Q 011882 12 GRKIGSGSFG-EIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGG-STGIPNLRWFGVEG---DYNVLVIDLL 86 (475)
Q Consensus 12 ~~~LG~G~fG-~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~-~~~i~~l~~~~~~~---~~~~lvme~~ 86 (475)
++.|+.|+.. .||+.. ..+++|+.........+..|.+++..+... ...++.+...+... ...+++|+++
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 3567777776 599752 357889865544445789999999998753 23466666655443 2457889998
Q ss_pred -CCCH
Q 011882 87 -GPSL 90 (475)
Q Consensus 87 -g~sL 90 (475)
|.++
T Consensus 77 ~G~~l 81 (235)
T cd05155 77 EGETA 81 (235)
T ss_pred cCCCC
Confidence 5454
No 465
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.06 E-value=5.7e-07 Score=94.35 Aligned_cols=185 Identities=12% Similarity=0.046 Sum_probs=134.1
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCC-cCeeEEeeEeCCEEEEEEEcCC
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTG-IPNLRWFGVEGDYNVLVIDLLG 87 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~-i~~l~~~~~~~~~~~lvme~~g 87 (475)
|....-+++|+++.+++.+...+...+ .|++... ....-++++|.++++ ++ .+....-+..+++.+++|++++
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---l~~rl~~eLLdK~n~--P~~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---LSRRLAIELLDKVNN--PNPVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---hhhHHHHHHHHHccC--CCCcccccccCCcccccchhhhhhc
Confidence 445566789999999999876555444 6665433 456678888888887 55 3333444456678899999993
Q ss_pred CC--HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccc
Q 011882 88 PS--LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 165 (475)
Q Consensus 88 ~s--L~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~ 165 (475)
+. -...+.-..-.|..-+...+.+.-+.+|++||+.-=+||| ||+. ..+..++.||+....+....
T Consensus 318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~----s~~~~~~~~~~v~~~L~~~~---- 385 (829)
T KOG0576|consen 318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG----SEEEVKLLDFAVPPQLTRTM---- 385 (829)
T ss_pred CCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc----cccccccccccCCcccCccc----
Confidence 32 2222221111244455666777778899999998789999 8887 45788999999988765542
Q ss_pred cccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 011882 166 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 215 (475)
Q Consensus 166 ~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf~ 215 (475)
...++.+|+.++|||+..+..+....|+|++|+--.++.-|..|-.
T Consensus 386 ----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 ----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 2356789999999999999999999999999988778877777654
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.05 E-value=5.6e-05 Score=85.42 Aligned_cols=78 Identities=9% Similarity=0.144 Sum_probs=54.6
Q ss_pred EeeeEeeeCceeEEEEEEccCC--eEEEEEEeccCC---CchHHHHHHHHHHHHh-CCCCCcCeeEEeeEeC---CEEEE
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTN--EEVAIKLENVKT---KHPQLQYEAKLYKILQ-GGSTGIPNLRWFGVEG---DYNVL 81 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~--~~vAvKi~~~~~---~~~~~~~E~~il~~l~-~~~~~i~~l~~~~~~~---~~~~l 81 (475)
-+++|+.|.+..+|+......+ ..+++|+..... ....+.+|.++++.+. +....++.+++++.+. ...|+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 3577899999999998764332 467888754322 2246889999999996 3334567777776653 45789
Q ss_pred EEEcCCC
Q 011882 82 VIDLLGP 88 (475)
Q Consensus 82 vme~~g~ 88 (475)
|||++.+
T Consensus 122 VME~v~G 128 (822)
T PLN02876 122 IMEYLEG 128 (822)
T ss_pred EEEecCC
Confidence 9999943
No 467
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.02 E-value=9.3e-05 Score=68.58 Aligned_cols=126 Identities=20% Similarity=0.327 Sum_probs=85.7
Q ss_pred CCceEEeeeEeeeCc-eeEEEEEEccCCeEEEEEEecc---C--------------------CCchHHHHHHHHHHHHhC
Q 011882 6 GNKFRLGRKIGSGSF-GEIYLGTNIQTNEEVAIKLENV---K--------------------TKHPQLQYEAKLYKILQG 61 (475)
Q Consensus 6 ~~~y~l~~~LG~G~f-G~Vy~a~~~~~~~~vAvKi~~~---~--------------------~~~~~~~~E~~il~~l~~ 61 (475)
+.+++.++.||.|.- |.||+++ ..|+.||||++.. . ....-+..|.+.+-+|+.
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 368999999999999 9999998 5788999998321 0 011236778888888876
Q ss_pred CCC-Cc--CeeEEeeEeC------------------CEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Q 011882 62 GST-GI--PNLRWFGVEG------------------DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 120 (475)
Q Consensus 62 ~~~-~i--~~l~~~~~~~------------------~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yL 120 (475)
.+. ++ ++.++|..-. ....||.||....- .++. .=+.+|.+-|..+
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~ 180 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKIL 180 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHH
Confidence 433 34 3444333211 12356666652211 1222 2346778888999
Q ss_pred HhCCceecCCCCCcEEEeeCCCCCcEEEeecCCc
Q 011882 121 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 154 (475)
Q Consensus 121 H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA 154 (475)
|..||+-+|+|+.|..=+ ||+|||.+
T Consensus 181 ~k~gI~~~Dv~~~ny~~G--------~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLGIVPRDVKPRNYRGG--------KLVDFSSS 206 (207)
T ss_pred HHCCeeeccCccccccCC--------EEEecccC
Confidence 999999999999998732 79999965
No 468
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.98 E-value=0.00073 Score=68.28 Aligned_cols=71 Identities=14% Similarity=0.214 Sum_probs=48.3
Q ss_pred eEeeeCceeEEEEEEccCCeEEEEEEe----cc-----CCCchHHHHHHHHHHHHhCCCC-CcCeeEEeeEeCCEEEEEE
Q 011882 14 KIGSGSFGEIYLGTNIQTNEEVAIKLE----NV-----KTKHPQLQYEAKLYKILQGGST-GIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvKi~----~~-----~~~~~~~~~E~~il~~l~~~~~-~i~~l~~~~~~~~~~~lvm 83 (475)
.||.|....||++.+...++.|+||.- +. .....+...|.+.|+......| .+|.++.|. .+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D--~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFD--TEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEc--cccceehH
Confidence 579999999999997544468999952 21 1123456788888887765434 456655544 44567899
Q ss_pred EcC
Q 011882 84 DLL 86 (475)
Q Consensus 84 e~~ 86 (475)
|++
T Consensus 80 EdL 82 (370)
T TIGR01767 80 EDL 82 (370)
T ss_pred hhC
Confidence 988
No 469
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.92 E-value=0.00099 Score=68.60 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=52.5
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccC---------CCchHHHHHHHHHHHHhCC-CCCcCeeEEeeEeCCEEEE
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---------TKHPQLQYEAKLYKILQGG-STGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~---------~~~~~~~~E~~il~~l~~~-~~~i~~l~~~~~~~~~~~l 81 (475)
.+.||.|.+..||++.+...++.|+||.-... ........|.+.|+.+... ...+|.++.+.. +..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEE
Confidence 46789999999999997543368999973311 1234567888888887542 245788877754 44689
Q ss_pred EEEcCC
Q 011882 82 VIDLLG 87 (475)
Q Consensus 82 vme~~g 87 (475)
|||++.
T Consensus 109 VME~L~ 114 (401)
T PRK09550 109 VMEDLS 114 (401)
T ss_pred EEecCC
Confidence 999983
No 470
>PRK10593 hypothetical protein; Provisional
Probab=97.90 E-value=0.00023 Score=70.67 Aligned_cols=80 Identities=15% Similarity=0.126 Sum_probs=58.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCC-CCcCeeEEeeEe---CCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGS-TGIPNLRWFGVE---GDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~-~~i~~l~~~~~~---~~~~~lvm 83 (475)
.-.-.+.||.|..+.||.... .+..+++|+.+.......+..|.+.++.|.... ..+|.++.++.. .+..+|||
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYD--SQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hhheeeecCCccceeEEEEEc--CCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 344567899999999999863 233577888543234468999999999997642 468888877653 36689999
Q ss_pred EcC-CCC
Q 011882 84 DLL-GPS 89 (475)
Q Consensus 84 e~~-g~s 89 (475)
|++ |.+
T Consensus 93 E~i~G~~ 99 (297)
T PRK10593 93 ERLRGVS 99 (297)
T ss_pred eccCCEe
Confidence 998 443
No 471
>PRK05231 homoserine kinase; Provisional
Probab=97.81 E-value=0.00048 Score=68.96 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=47.5
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEE------eeEeCCEEEEEEEc
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRW------FGVEGDYNVLVIDL 85 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~------~~~~~~~~~lvme~ 85 (475)
.+.|+.|....+|+... . +..+++|+.. ......+..|..++..|......++.+.. +....+..++++++
T Consensus 27 ~~~l~~G~~n~~y~v~t-~-~g~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 27 LKGIAEGIENSNFFLTT-T-QGEYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred cchhccccccceEEEEe-C-CCcEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 45677777789999873 3 3468999876 33445677788888888653333555432 22345567899999
Q ss_pred C
Q 011882 86 L 86 (475)
Q Consensus 86 ~ 86 (475)
+
T Consensus 104 l 104 (319)
T PRK05231 104 L 104 (319)
T ss_pred c
Confidence 8
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.77 E-value=0.00044 Score=65.90 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=48.8
Q ss_pred eeeEeeeCceeEEEEEEcc-CCeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CC
Q 011882 12 GRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GP 88 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~-~~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~ 88 (475)
++.|..|-...+|++.... .++.|++|+....... -....|..++..+... ...|.++.... ..++|||+ |.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-gl~P~v~~~~~----~~~l~e~i~G~ 77 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-GLAPKLYATFQ----NGLIYEFIPGR 77 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-CCCCeEEEEeC----CcEEEEeeCCC
Confidence 4667788888999997432 3578999986543222 2345788899888654 34666654432 24799998 54
Q ss_pred CH
Q 011882 89 SL 90 (475)
Q Consensus 89 sL 90 (475)
++
T Consensus 78 ~l 79 (235)
T cd05157 78 TL 79 (235)
T ss_pred cC
Confidence 44
No 473
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.71 E-value=0.00035 Score=69.65 Aligned_cols=141 Identities=18% Similarity=0.262 Sum_probs=82.7
Q ss_pred EEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEe------eEeCCEEEEEE
Q 011882 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWF------GVEGDYNVLVI 83 (475)
Q Consensus 10 ~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~------~~~~~~~~lvm 83 (475)
.-++.|+.|....+|++.. . +..+++|+.........+..|.+++..|......++.+... ....+..+++|
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred eeccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 3466777777789999863 3 44688898755434456778888888886532334444331 12345678999
Q ss_pred EcC-CCCH-----H------HHHH---HcCCCC--------CHH---HHH------------HHHHHHHHHHHHHHh---
Q 011882 84 DLL-GPSL-----E------DLFN---FCSRKL--------SLK---TVL------------MLADQMINRVEFVHS--- 122 (475)
Q Consensus 84 e~~-g~sL-----~------~ll~---~~~~~l--------s~~---~~~------------~i~~qi~~aL~yLH~--- 122 (475)
+++ |..+ . ..+. .....+ ... ... .....+...++++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 998 4221 1 1111 100111 000 000 001123344555542
Q ss_pred ----CCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 123 ----KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 123 ----~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
.+++|+|+.+.||+++ .++.+.|+||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~---~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFD---GDSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEE---CCceEEEeeccccc
Confidence 6899999999999995 44556899999874
No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.62 E-value=0.00061 Score=67.33 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=82.3
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEE------eeEeCCEEEEEEEc
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRW------FGVEGDYNVLVIDL 85 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~------~~~~~~~~~lvme~ 85 (475)
++.|..|....+|+... .+..+++|+... .....+..|..++..|......++.+.. +...++..++++++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 56777788789999863 445789998765 3445688899999988653333444432 22334566899999
Q ss_pred C-CCCHHH-----------HHH---HcCCCC----------CHHHH----------HHHHHHHHHHHHHHHh-------C
Q 011882 86 L-GPSLED-----------LFN---FCSRKL----------SLKTV----------LMLADQMINRVEFVHS-------K 123 (475)
Q Consensus 86 ~-g~sL~~-----------ll~---~~~~~l----------s~~~~----------~~i~~qi~~aL~yLH~-------~ 123 (475)
+ |..+.. .+. .....+ .+... ......+...+.++-. .
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 8 444311 111 000000 11000 0011112334444443 4
Q ss_pred CceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 124 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 124 gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
+++|+|+.|.|||+. +++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~---~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFD---GDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEe---CCceEEEeehhhhc
Confidence 799999999999994 45556899999874
No 475
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.52 E-value=8.4e-05 Score=72.98 Aligned_cols=132 Identities=19% Similarity=0.332 Sum_probs=92.3
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccC--------CCc----------------hHHHHHHHHHHHHhCCCC
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--------TKH----------------PQLQYEAKLYKILQGGST 64 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~--------~~~----------------~~~~~E~~il~~l~~~~~ 64 (475)
+.++.+||-|--+.||.+.+ ..|.+.++|+-... .+. -...+|...++.|..+.-
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 66889999999999999986 67888999952211 000 024568888888876434
Q ss_pred CcCeeEEeeEeCCEEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEeeCCCC
Q 011882 65 GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 143 (475)
Q Consensus 65 ~i~~l~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 143 (475)
-+|... +....|+|||++ |..|..+.+ -.+.. .+...+..-+.-|-.+|+||+|..-=||+| +++
T Consensus 173 pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~----v~d~~---~ly~~lm~~Iv~la~~GlIHgDFNEFNimv---~dd 238 (465)
T KOG2268|consen 173 PVPKPI----DHNRHCVVMELVDGYPLRQVRH----VEDPP---TLYDDLMGLIVRLANHGLIHGDFNEFNIMV---KDD 238 (465)
T ss_pred CCCCcc----cccceeeHHHhhcccceeeeee----cCChH---HHHHHHHHHHHHHHHcCceecccchheeEE---ecC
Confidence 444432 345678999999 666655432 12233 344445555667779999999999999999 467
Q ss_pred CcEEEeecCCcc
Q 011882 144 NQVYIIDFGLAK 155 (475)
Q Consensus 144 ~~vkL~DFGlA~ 155 (475)
+.++++||=-..
T Consensus 239 ~~i~vIDFPQmv 250 (465)
T KOG2268|consen 239 DKIVVIDFPQMV 250 (465)
T ss_pred CCEEEeechHhh
Confidence 889999997554
No 476
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.51 E-value=0.00067 Score=67.83 Aligned_cols=138 Identities=23% Similarity=0.281 Sum_probs=93.8
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEeccCC----------------------Cch------HHHHHHHHHHHHhCC
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----------------------KHP------QLQYEAKLYKILQGG 62 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~----------------------~~~------~~~~E~~il~~l~~~ 62 (475)
|-..|..|--+.||.|. ..+|..+|||+.+... ..+ ....|.+-|..+..
T Consensus 148 inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~- 225 (520)
T KOG2270|consen 148 INGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN- 225 (520)
T ss_pred cccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh-
Confidence 44567778888999998 4788889999754211 001 13556677777765
Q ss_pred CCCcCeeEEeeEeCCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEeeCC
Q 011882 63 STGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGR 141 (475)
Q Consensus 63 ~~~i~~l~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~ 141 (475)
-.||.-.-+.. ...+|||+|+|.+-+-.-....-.++...+..+-.|++.-|.-|. .+++||.||.-=|+|+
T Consensus 226 -aGIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly---- 298 (520)
T KOG2270|consen 226 -AGIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY---- 298 (520)
T ss_pred -cCCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE----
Confidence 33432211111 235799999975443322212345777788888888888887765 5799999999999999
Q ss_pred CCCcEEEeecCCcccc
Q 011882 142 RANQVYIIDFGLAKRY 157 (475)
Q Consensus 142 ~~~~vkL~DFGlA~~~ 157 (475)
..|.++|+|-+-+...
T Consensus 299 hdG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 299 HDGKLYIIDVSQSVEH 314 (520)
T ss_pred ECCEEEEEEccccccC
Confidence 5789999999877543
No 477
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.48 E-value=0.0082 Score=61.51 Aligned_cols=73 Identities=18% Similarity=0.289 Sum_probs=50.6
Q ss_pred eeeEeeeCceeEEEEEEccCCeEEEEEE----eccC----CCchHHHHHHHHHHHHhCCCC-CcCeeEEeeEeCCEEEEE
Q 011882 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKL----ENVK----TKHPQLQYEAKLYKILQGGST-GIPNLRWFGVEGDYNVLV 82 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvKi----~~~~----~~~~~~~~E~~il~~l~~~~~-~i~~l~~~~~~~~~~~lv 82 (475)
.+.||.|.-..||++.+...++.|+||. ++.. ....+...|.+.|+.+....| .+|.++.+.. +...+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~--e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDS--VMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECc--HHhhHH
Confidence 5688999999999999744457899994 2221 123457789999988765434 5666666544 445688
Q ss_pred EEcC
Q 011882 83 IDLL 86 (475)
Q Consensus 83 me~~ 86 (475)
||++
T Consensus 112 MEdL 115 (409)
T PRK12396 112 MEDL 115 (409)
T ss_pred HHhC
Confidence 8877
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.48 E-value=0.00041 Score=64.13 Aligned_cols=98 Identities=23% Similarity=0.287 Sum_probs=75.3
Q ss_pred HHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcCC-CCHHHH----HHHcCCCCCHHHHHHHHHHHHHHHHHHHh--
Q 011882 50 QYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLLG-PSLEDL----FNFCSRKLSLKTVLMLADQMINRVEFVHS-- 122 (475)
Q Consensus 50 ~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~g-~sL~~l----l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-- 122 (475)
..|.-+++.+++. .+++++++++ + .+++.|+.+ +++... .+ -..-+|....+|+.++++.+++|+.
T Consensus 7 ~~E~lll~~l~~~-~~~pk~lG~C--G--~~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~iA~~lL~~l~~l~~~~ 79 (188)
T PF12260_consen 7 NNEPLLLQLLQGS-EPFPKLLGSC--G--RFYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAKIALQLLELLEELDHGP 79 (188)
T ss_pred ccHHHHHHHcCCC-CCCCCeeeEC--C--CEEEEEeecCcccccccccccc--ccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 3578888888886 5888887776 2 357888885 344321 11 1136899999999999999999997
Q ss_pred -CCceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 123 -KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 123 -~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
..+.-.|++|+||-+. +++.+|++|...+...
T Consensus 80 ~~~~~lcDv~~~nfgv~---~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 80 LGFFYLCDVSPDNFGVN---DDGRLKLIDLDDVFVE 112 (188)
T ss_pred CCcEEEeecchHHeEEe---CCCcEEEEechhcchh
Confidence 4588899999999994 6788999999987654
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.47 E-value=0.0011 Score=65.82 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=48.9
Q ss_pred eeeEeeeCceeEEEEEEcc------CCeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEE
Q 011882 12 GRKIGSGSFGEIYLGTNIQ------TNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVID 84 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~------~~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme 84 (475)
++.|..|-...||++.... .++.|++|+....... .....|.+++..+... ...+.++.+... .+|++
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~-g~~P~~~~~~~~----~~v~e 77 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER-NLGPKLYGIFPN----GRIEE 77 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC-CCCCceEEEeCC----Cchhh
Confidence 3556667777999987432 2578999997654322 4578899999998765 345666655532 35788
Q ss_pred cC-CCCH
Q 011882 85 LL-GPSL 90 (475)
Q Consensus 85 ~~-g~sL 90 (475)
|+ |..+
T Consensus 78 ~i~G~~l 84 (302)
T cd05156 78 FIPSRTL 84 (302)
T ss_pred eeCCCcC
Confidence 87 4444
No 480
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.44 E-value=0.0011 Score=74.66 Aligned_cols=202 Identities=16% Similarity=0.160 Sum_probs=127.6
Q ss_pred HHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE----EcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 011882 51 YEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI----DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 125 (475)
Q Consensus 51 ~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm----e~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gI 125 (475)
.|.++.......|.++..+..|..+.....+++ ++| ..++..++.. -..++..+++.+..++..||.|+|+...
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~l 307 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLSL 307 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence 355554455555588888888887665554444 445 5677776663 4568999999999999999999999854
Q ss_pred eecCCCCCcEEEeeCCCCCcEEEe--ecCCcccccccccccccccccCCCCccCccccccccccCCCCC--CchhHHHHH
Q 011882 126 LHRDIKPDNFLMGLGRRANQVYII--DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS--RRDDLESLG 201 (475)
Q Consensus 126 vHrDIKP~NILl~~~~~~~~vkL~--DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s--~ksDIwSlG 201 (475)
.|.=|-..-..-...+..+.+.+. ||+..+.+.+..... ...-+..|.++|......+. +..|+|.+|
T Consensus 308 ~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--------~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg 379 (1351)
T KOG1035|consen 308 EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--------SDLLAEIRNADEDLKENTAKKSRLTDLWCLG 379 (1351)
T ss_pred ceeEEecccccccccCccceeecchhhhcccccCCCcccch--------hhcCccccccccccccccchhhhhhHHHHHH
Confidence 443333221111111344555655 888888766543211 12334557778877765554 457999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCChHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011882 202 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 281 (475)
Q Consensus 202 ~iL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 281 (475)
..+..+..|..+-.... ....-++..+..+..+.+.+|+.-+.++|+.+.++ +...|.+.
T Consensus 380 ll~~~~~~~~~i~~~~~-----------------~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~l---l~~~f~~~ 439 (1351)
T KOG1035|consen 380 LLLLQLSQGEDISEKSA-----------------VPVSLLDVLSTSELLDALPKCLDEDSEERLSALEL---LTHPFLRF 439 (1351)
T ss_pred HHHhhhhhcCccccccc-----------------chhhhhccccchhhhhhhhhhcchhhhhccchhhh---hhchhccc
Confidence 99999988755422100 00111112223378889999999999999998776 45555443
No 481
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.38 E-value=0.0034 Score=60.77 Aligned_cols=131 Identities=18% Similarity=0.169 Sum_probs=76.9
Q ss_pred eEeeeCceeEEEEEEccCCeEEEEEEeccCCCc--hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC-CCCH
Q 011882 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL-GPSL 90 (475)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~--~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~-g~sL 90 (475)
.+..|-.+.+|+.. .+++.+++|+....... -....|.++++.+... ...|.++.... .++||+|+ |..+
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~-g~~P~~i~~~~----~~~v~e~i~G~~~ 75 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSAL-GLAPKPILVNE----HWLLVEWLEGEVI 75 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc-CCCCceEEEeC----CEEEEEeccCccc
Confidence 35567888999987 46778999975443222 2467899999998763 23566655542 36899998 4443
Q ss_pred HH-----------H---HHHc------CCCCCHH-HHHHHHHHH---------HHHHHHHHh--------CCceecCCCC
Q 011882 91 ED-----------L---FNFC------SRKLSLK-TVLMLADQM---------INRVEFVHS--------KSFLHRDIKP 132 (475)
Q Consensus 91 ~~-----------l---l~~~------~~~ls~~-~~~~i~~qi---------~~aL~yLH~--------~gIvHrDIKP 132 (475)
.. + +... ..+++.. .+..+..++ ...+..+-. ..++|+|+.|
T Consensus 76 ~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~ 155 (256)
T TIGR02721 76 TLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHA 155 (256)
T ss_pred ccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCc
Confidence 21 1 1111 1112222 112222111 111222211 2589999999
Q ss_pred CcEEEeeCCCCCcEEEeecCCcc
Q 011882 133 DNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 133 ~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
.|||++ +++ ++|+||..|.
T Consensus 156 ~Nil~~---~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 156 YNLVVT---PQG-LKLIDWEYAS 174 (256)
T ss_pred CcEEEe---CCC-CEEEeccccC
Confidence 999995 333 7899999885
No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.09 E-value=0.0031 Score=61.97 Aligned_cols=46 Identities=7% Similarity=0.047 Sum_probs=30.2
Q ss_pred eeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCC
Q 011882 16 GSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGG 62 (475)
Q Consensus 16 G~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~ 62 (475)
++|-...||... ...|..+++|+-........+.+|.+++..+...
T Consensus 20 ~~g~~~~v~~i~-~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~ 65 (276)
T cd05152 20 ESGLDFQVVFAK-DTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKH 65 (276)
T ss_pred CCcceeEEEEEE-cCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 333344555543 2457889999865433445689999999999763
No 483
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.98 E-value=0.00014 Score=83.39 Aligned_cols=130 Identities=12% Similarity=-0.017 Sum_probs=98.1
Q ss_pred eCCEEEEEEEcC-CCCHHHHHHHcCCC---CCHHHHHHHHHHHHHHHHHHHhC-----CceecCCCCCcEEEeeCCCCCc
Q 011882 75 EGDYNVLVIDLL-GPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHSK-----SFLHRDIKPDNFLMGLGRRANQ 145 (475)
Q Consensus 75 ~~~~~~lvme~~-g~sL~~ll~~~~~~---ls~~~~~~i~~qi~~aL~yLH~~-----gIvHrDIKP~NILl~~~~~~~~ 145 (475)
+....+.+++++ +|.+.+.+-+...+ +...-+.....+.+.+..-+|.. --+|++||+-|.+| ..+..
T Consensus 1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmI---Vtny~ 1378 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMI---VTNYN 1378 (2724)
T ss_pred CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccce---ecCCc
Confidence 344557888888 88888877643222 44444555555547777777753 27899999999999 57788
Q ss_pred EEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHHHHHHHcCCCCC
Q 011882 146 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 214 (475)
Q Consensus 146 vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~iL~elltG~~Pf 214 (475)
+|+.++|+.+....... ..+...+++.|+++++.....++.++|+|..|+.+|+...|..+|
T Consensus 1379 v~~gk~gLdKIknp~~s-------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1379 VKLGKGGLDKIKNPVLS-------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred ccccccccccccCchHh-------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 99999999983332211 224567899999999999999999999999999999999998887
No 484
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.96 E-value=0.0032 Score=65.53 Aligned_cols=162 Identities=20% Similarity=0.194 Sum_probs=94.5
Q ss_pred CchHHHHHHHHHHHHhCCCCCcCeeEEeeEe-CCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 011882 45 KHPQLQYEAKLYKILQGGSTGIPNLRWFGVE-GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 123 (475)
Q Consensus 45 ~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~-~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~ 123 (475)
...++.-....++.+++ ++...+.++... ....++|||+++.||++++.... +-..... .+
T Consensus 25 ~s~~ilgr~~~lktl~~--~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s~~--------------~~ 86 (725)
T KOG1093|consen 25 NSIQILGRFQYLKSLQH--DNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDESLL--------------AH 86 (725)
T ss_pred cHHHHhhhhHHHHhhcC--ccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhhhc--------------cc
Confidence 34455666677777777 677777766553 34588999999999999987432 2111111 22
Q ss_pred CceecCCCCCcEEEeeCCCCCcEEEeecCCcccccccccccccccccCCCCccCccccccccccCCCCCCchhHHHHHHH
Q 011882 124 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYV 203 (475)
Q Consensus 124 gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~g~~~s~ksDIwSlG~i 203 (475)
++.| -|| ++++| -++... .... .+|+||||+|.+
T Consensus 87 ~~~~-----~~~----------~~~td-~~~t~~--------------~~~~----------------~pKsdVwsl~~i 120 (725)
T KOG1093|consen 87 GVLH-----LNI----------IYITD-HFLTKY--------------PSPI----------------GPKSDVWSLGFI 120 (725)
T ss_pred ccce-----ehh----------hhccc-cccccC--------------CCCC----------------CcchhhhhHHHH
Confidence 3322 222 33444 111100 0011 249999999999
Q ss_pred HHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc---ccHH-HHhcCChHHHHHHHHHHhcCCCCCCCCHHHH
Q 011882 204 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS---TSIE-ALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 270 (475)
Q Consensus 204 L~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~---~~~~-~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 270 (475)
+.|+.-|..-|...........+.+....... ...+ .+...++..+..+...|+-..|..||...++
T Consensus 121 ~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 121 ILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 99999998888664433222222222111110 0011 1223457788999999999999999876554
No 485
>PLN02236 choline kinase
Probab=96.91 E-value=0.019 Score=58.25 Aligned_cols=137 Identities=13% Similarity=0.163 Sum_probs=78.4
Q ss_pred eeeEeeeCceeEEEEEEcc----CCeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 12 GRKIGSGSFGEIYLGTNIQ----TNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~----~~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
+..|-.|-...+|++.... .++.|++|+....... -....|..+++.+... ..-+.++++...+ .|++|+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~-gl~P~~~~~~~~g----~v~efi 115 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRH-GQGPRLLGRFPNG----RVEEFI 115 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHc-CCCCceEEEECCc----eEEEee
Confidence 4455558888999987432 2468999987554321 1346788898888764 4455665554322 467777
Q ss_pred -CCCHHH-----------H---HHHc-C-----CC-CC-HHHHHHHHHHH-----------------HHHHHHH----H-
Q 011882 87 -GPSLED-----------L---FNFC-S-----RK-LS-LKTVLMLADQM-----------------INRVEFV----H- 121 (475)
Q Consensus 87 -g~sL~~-----------l---l~~~-~-----~~-ls-~~~~~~i~~qi-----------------~~aL~yL----H- 121 (475)
+.+|.. + +... . .. +. ...+..+..++ ...+..| .
T Consensus 116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~ 195 (344)
T PLN02236 116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG 195 (344)
T ss_pred CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence 444421 1 1100 0 01 11 22333332221 1111122 1
Q ss_pred ---hCCceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 122 ---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 122 ---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
...++|+|+++.|||++ +..+.++|+||..|.
T Consensus 196 ~~~~~~~cH~Dl~~~Nil~~--~~~~~~~lID~Eya~ 230 (344)
T PLN02236 196 DDQEIGFCHNDLQYGNIMID--EETRAITIIDYEYAS 230 (344)
T ss_pred cCCCceEEeCCCCcCcEEEe--CCCCcEEEEeehhcc
Confidence 23589999999999995 334689999998875
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.83 E-value=0.023 Score=58.63 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=50.2
Q ss_pred EeeeEeeeCceeEEEEEEccCCeEEEEEEec-----cCC----CchHHHHHHHHHHHHhCCC-CCcCeeEEeeEeCCEEE
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN-----VKT----KHPQLQYEAKLYKILQGGS-TGIPNLRWFGVEGDYNV 80 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~-----~~~----~~~~~~~E~~il~~l~~~~-~~i~~l~~~~~~~~~~~ 80 (475)
-.+.||.|....||+..+ .+..|+||.-. ... ...+...|.+.|+.+.... ..+|.++.++. +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 367889999999999986 34579999633 111 2344566777776665322 46788888777 4467
Q ss_pred EEEEcCCC
Q 011882 81 LVIDLLGP 88 (475)
Q Consensus 81 lvme~~g~ 88 (475)
++||++.+
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88999933
No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.80 E-value=0.033 Score=55.26 Aligned_cols=61 Identities=11% Similarity=0.072 Sum_probs=38.2
Q ss_pred eEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCeeEEe------eEeCCEEEEEEEcC
Q 011882 22 EIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPNLRWF------GVEGDYNVLVIDLL 86 (475)
Q Consensus 22 ~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~l~~~------~~~~~~~~lvme~~ 86 (475)
.||++.. ++..+++|+... ....+..|..++..|......++.+... ...++..+++++++
T Consensus 11 ~v~~v~t--~~g~~~LK~~~~--~~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i 77 (313)
T TIGR02906 11 NVYKVET--DSGNKCLKKINY--PPERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWI 77 (313)
T ss_pred cEEEEEe--CCCCeEEEEcCC--CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhc
Confidence 4888873 334688998753 2345677888887776532344444321 23456789999998
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.67 E-value=0.025 Score=57.09 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=44.0
Q ss_pred ceEEeeeEeeeCceeEEEEEEccC---CeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 8 KFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 8 ~y~l~~~LG~G~fG~Vy~a~~~~~---~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
..++. .|..|=...+|++..... +..|++|+....... -.-..|..+++.+... ..-+.++++.. +. ++.
T Consensus 16 ~i~i~-~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~-gl~P~~l~~~~-~G---~i~ 89 (330)
T PLN02421 16 DFSVE-RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA-GFGAKLLGVFG-NG---MIQ 89 (330)
T ss_pred ceEEE-EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc-CCCCceeEEeC-Cc---Eee
Confidence 34444 444477778999874332 347999987554321 2346788888888764 33456655543 22 467
Q ss_pred EcC
Q 011882 84 DLL 86 (475)
Q Consensus 84 e~~ 86 (475)
+|+
T Consensus 90 ~fi 92 (330)
T PLN02421 90 SFI 92 (330)
T ss_pred hhh
Confidence 776
No 489
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.50 E-value=0.0092 Score=59.87 Aligned_cols=74 Identities=24% Similarity=0.292 Sum_probs=60.8
Q ss_pred EeCCEEEEEEEcCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEeeCCCCCcEEEeecC
Q 011882 74 VEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFG 152 (475)
Q Consensus 74 ~~~~~~~lvme~~g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFG 152 (475)
.++.|.|++|++-|++|.-+- ....++++.|+.+.+.-|.-+..+ .+-|||+.-.|||| + .|+|.|+||-
T Consensus 296 de~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI---d-~GnvtLIDfk 366 (488)
T COG5072 296 DETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI---D-EGNVTLIDFK 366 (488)
T ss_pred CCceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee---e-cCceEEEEee
Confidence 566788999999998886432 246788999999988877777654 58899999999999 3 8999999999
Q ss_pred Cccc
Q 011882 153 LAKR 156 (475)
Q Consensus 153 lA~~ 156 (475)
+++.
T Consensus 367 lsRl 370 (488)
T COG5072 367 LSRL 370 (488)
T ss_pred eeec
Confidence 9984
No 490
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.43 E-value=0.02 Score=57.08 Aligned_cols=143 Identities=13% Similarity=0.197 Sum_probs=76.5
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEecc-CCC---chHHHHHHHHHHHHhCCCCCcCeeEEeeEeCC--EEEEE
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-KTK---HPQLQYEAKLYKILQGGSTGIPNLRWFGVEGD--YNVLV 82 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~-~~~---~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~--~~~lv 82 (475)
..+++.+-.|---.+|...+ +++.++|. ... ... .....+|.++++.+.....-++..++++.++. ..|.|
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~--~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v 103 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGD--TGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYV 103 (321)
T ss_pred CceeeeccCCcccceEEEec--CCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEE
Confidence 34455553333335555543 37788888 331 122 23456677777766553233444455555444 56899
Q ss_pred EEcCCC-------------------CHHHHHHHcC-------------CCCCHHHHHHHHHHH--------------HHH
Q 011882 83 IDLLGP-------------------SLEDLFNFCS-------------RKLSLKTVLMLADQM--------------INR 116 (475)
Q Consensus 83 me~~g~-------------------sL~~ll~~~~-------------~~ls~~~~~~i~~qi--------------~~a 116 (475)
|+++.| .|.+++.... ..+...++..+..+. ..-
T Consensus 104 ~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~ 183 (321)
T COG3173 104 MEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRL 183 (321)
T ss_pred EEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHH
Confidence 999833 1222221110 001111222222222 222
Q ss_pred HHHHHhC--------CceecCCCCCcEEEeeCCCCCcEEEeecCCcccc
Q 011882 117 VEFVHSK--------SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 157 (475)
Q Consensus 117 L~yLH~~--------gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~~~ 157 (475)
..+|+.+ .++|+|+.+.||+|. ..+-+=|+||+++..-
T Consensus 184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~---~~~~~gVlDwe~~~lG 229 (321)
T COG3173 184 IKWLEANRPPWAGPPVLVHGDYRPGNLIID---PGRPTGVLDWELATLG 229 (321)
T ss_pred HHHHHhcCCCcCCCceeeeCCcccCCEEEe---CCCeeEEEeccccccC
Confidence 4455542 489999999999995 4444889999999753
No 491
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.30 E-value=0.12 Score=51.98 Aligned_cols=68 Identities=10% Similarity=0.063 Sum_probs=41.7
Q ss_pred eCceeEEEEEEccCCeEEEEEEeccCC-CchHHHHHHHHHHHHhCCCCCcCe-e----EEeeEeCCEEEEEEEcC
Q 011882 18 GSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGSTGIPN-L----RWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 18 G~fG~Vy~a~~~~~~~~vAvKi~~~~~-~~~~~~~E~~il~~l~~~~~~i~~-l----~~~~~~~~~~~lvme~~ 86 (475)
+.-..||+... .++..+++|+..... ...++..|.+++..|....-.++. + ..+...+++.+.+++++
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~ 109 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRR 109 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeee
Confidence 34457898873 556789999876443 345677899988888652122222 1 01123345677888887
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.13 E-value=0.036 Score=54.76 Aligned_cols=75 Identities=17% Similarity=0.258 Sum_probs=52.8
Q ss_pred eEEeeeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHh-CCCCCcCeeEEeeEeCCEEEEEEEcC
Q 011882 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQ-GGSTGIPNLRWFGVEGDYNVLVIDLL 86 (475)
Q Consensus 9 y~l~~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~-~~~~~i~~l~~~~~~~~~~~lvme~~ 86 (475)
.+-.+.|+.|....+|+.. .+++.+.||+-. ......+..|.+-|+.|. .....+|.++.++...+..+|+||++
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 3446778889999999987 778899999876 444567899999999994 33366888999998888889999998
No 493
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=96.13 E-value=0.022 Score=58.05 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=44.3
Q ss_pred EEEEEEEcC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEee
Q 011882 78 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGL 139 (475)
Q Consensus 78 ~~~lvme~~-g~sL~~ll~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~ 139 (475)
..+|+.+|+ |-++..+++. ...+++.+..++.=.+.||.-|- -.+++|.|+.|.||++..
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~--~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKW--KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred cceeeeeccccccHHhhhhc--ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 346777888 7788888873 33555666777776777765544 478999999999999964
No 494
>PRK06148 hypothetical protein; Provisional
Probab=95.88 E-value=0.14 Score=59.39 Aligned_cols=78 Identities=14% Similarity=0.230 Sum_probs=48.2
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCC--cCeeEE------e-eE---eC-CEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTG--IPNLRW------F-GV---EG-DYN 79 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~--i~~l~~------~-~~---~~-~~~ 79 (475)
+.|+ |..-.+|+... .+|..+++|+.+.......+..|..++..|....+. ++.+.- + .. .+ .+.
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~ 108 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRL 108 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEE
Confidence 4564 45678898873 567789999988765555677788888877654233 333321 1 11 11 146
Q ss_pred EEEEEcC-CCCHHH
Q 011882 80 VLVIDLL-GPSLED 92 (475)
Q Consensus 80 ~lvme~~-g~sL~~ 92 (475)
+.+++|+ |..|.+
T Consensus 109 vrLl~~l~G~~l~~ 122 (1013)
T PRK06148 109 LRLLSWLPGTPLAE 122 (1013)
T ss_pred EEEEeccCCCcHHh
Confidence 6788888 555544
No 495
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.73 E-value=0.15 Score=50.70 Aligned_cols=29 Identities=24% Similarity=0.457 Sum_probs=25.5
Q ss_pred CceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 124 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 124 gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
+++|+|+.+.|||+ +.++.+.|+||..+.
T Consensus 197 ~lcHgD~~~~Nvl~---~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLY---DETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEE---cCCCCEEEEEhhhcc
Confidence 79999999999999 466779999998875
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.48 E-value=0.1 Score=52.56 Aligned_cols=135 Identities=18% Similarity=0.265 Sum_probs=78.2
Q ss_pred EeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCCCCcCe----eE--EeeEeC--CEEEEEEEcC
Q 011882 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGSTGIPN----LR--WFGVEG--DYNVLVIDLL 86 (475)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~~~i~~----l~--~~~~~~--~~~~lvme~~ 86 (475)
|.+ .-..||+... .+|+ ++||+........++..|..++..|.....-++. +. ....-. .+.+-+++|+
T Consensus 34 l~s-~eN~~f~~~~-~~g~-~iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l 110 (331)
T COG2334 34 LNS-EENSNFRVQT-EDGR-YILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYL 110 (331)
T ss_pred ccc-ccCceEEEEe-cCCC-eEEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEec
Confidence 444 4557898874 3444 4999988775567788999999888653222211 11 111223 3778888888
Q ss_pred -CCCHHH------------HHH---HcCCC-----------CCHH----H---------HHHHHHHHHHHHHHHHh----
Q 011882 87 -GPSLED------------LFN---FCSRK-----------LSLK----T---------VLMLADQMINRVEFVHS---- 122 (475)
Q Consensus 87 -g~sL~~------------ll~---~~~~~-----------ls~~----~---------~~~i~~qi~~aL~yLH~---- 122 (475)
|..+.. ++. ...+. ..+. . -.....++...+..+.+
T Consensus 111 ~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~ 190 (331)
T COG2334 111 PGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPA 190 (331)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchh
Confidence 545541 110 00011 1111 0 01123444555555554
Q ss_pred ----CC--ceecCCCCCcEEEeeCCCCC-cEEEeecCCcc
Q 011882 123 ----KS--FLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAK 155 (475)
Q Consensus 123 ----~g--IvHrDIKP~NILl~~~~~~~-~vkL~DFGlA~ 155 (475)
-+ +||+|+.|.||++. ... .+.++||+-|.
T Consensus 191 ~lp~~~~~iIH~D~~~~NVl~d---~~~~~~g~iDFdDa~ 227 (331)
T COG2334 191 HLPALGDQIIHGDLHPDNVLFD---DDTDVSGFIDFDDAG 227 (331)
T ss_pred hCCcccceeeecCCCccceeEc---CCCCeeeEEEccccc
Confidence 23 99999999999994 333 48899999874
No 497
>PTZ00384 choline kinase; Provisional
Probab=95.00 E-value=0.58 Score=48.20 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=43.8
Q ss_pred EeeeEeeeCceeEEEEEEccCC-e-----EEEEEEeccCC-CchHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEEEE
Q 011882 11 LGRKIGSGSFGEIYLGTNIQTN-E-----EVAIKLENVKT-KHPQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVLVI 83 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~~~-~-----~vAvKi~~~~~-~~~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~lvm 83 (475)
.++.|..|-...+|++...... . .|++++..... ..-.-..|..+++.+... ..-+.+++.+. .+++.
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~-glgP~l~~~f~----~g~l~ 128 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDN-NFGPKIIGRFG----DFTIQ 128 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhC-CCCCeEEEecC----CEEEE
Confidence 3456656888899999743321 2 25555422111 112346688898888764 55566655553 35888
Q ss_pred EcC-CCCH
Q 011882 84 DLL-GPSL 90 (475)
Q Consensus 84 e~~-g~sL 90 (475)
||+ |..|
T Consensus 129 efIeGr~l 136 (383)
T PTZ00384 129 EWVEGNTM 136 (383)
T ss_pred EEeccccC
Confidence 888 4443
No 498
>PRK06149 hypothetical protein; Provisional
Probab=94.65 E-value=0.52 Score=54.61 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=43.1
Q ss_pred eeEeeeCceeEEEEEEccCCeEEEEEEeccCCCchHHHHHHHHHHHHhCCC--CCcCeeEE-------eeE---eCCEEE
Q 011882 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGS--TGIPNLRW-------FGV---EGDYNV 80 (475)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvKi~~~~~~~~~~~~E~~il~~l~~~~--~~i~~l~~-------~~~---~~~~~~ 80 (475)
..|+.+. -.+|+... ++..+++|+.+.......+..|..++..|.... ..++.+.- ... ...+.+
T Consensus 37 ~~L~s~~-d~nf~v~t--~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~v 113 (972)
T PRK06149 37 TELGSQQ-DRNFRVDS--DGGRFVLKICHAAYAAVELEAQHAALRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRV 113 (972)
T ss_pred EecCCcC-cceEEEEe--cCCcEEEEeCCccCChHHHHHHHHHHHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEE
Confidence 4555333 36888764 235788999876555567888888888886642 23333311 111 124557
Q ss_pred EEEEcC
Q 011882 81 LVIDLL 86 (475)
Q Consensus 81 lvme~~ 86 (475)
.+++|+
T Consensus 114 rL~~~l 119 (972)
T PRK06149 114 RLLDYL 119 (972)
T ss_pred EEEEec
Confidence 788888
No 499
>PTZ00296 choline kinase; Provisional
Probab=93.85 E-value=0.95 Score=47.57 Aligned_cols=71 Identities=14% Similarity=0.035 Sum_probs=44.6
Q ss_pred EeeeEeeeCceeEEEEEEcc--------CCeEEEEEEeccCCCc-hHHHHHHHHHHHHhCCCCCcCeeEEeeEeCCEEEE
Q 011882 11 LGRKIGSGSFGEIYLGTNIQ--------TNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGSTGIPNLRWFGVEGDYNVL 81 (475)
Q Consensus 11 l~~~LG~G~fG~Vy~a~~~~--------~~~~vAvKi~~~~~~~-~~~~~E~~il~~l~~~~~~i~~l~~~~~~~~~~~l 81 (475)
-++.|..|-.-.+|++.... .++.|++++....+.. -....|..+++.+... ..-+.+++... .+.
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~-gi~P~l~~~f~----gg~ 183 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKY-RIAPQLLNTFS----GGR 183 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHC-CCCCceEEEeC----CCE
Confidence 45667667778999987532 1568999986544321 2346688888888764 33445554332 345
Q ss_pred EEEcC
Q 011882 82 VIDLL 86 (475)
Q Consensus 82 vme~~ 86 (475)
+.+|+
T Consensus 184 I~efi 188 (442)
T PTZ00296 184 IEEWL 188 (442)
T ss_pred EEEee
Confidence 67777
No 500
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=93.66 E-value=0.82 Score=44.70 Aligned_cols=44 Identities=23% Similarity=0.396 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhC--CceecCCCCCcEEEeeCCCCCcEEEeecCCcc
Q 011882 109 LADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 155 (475)
Q Consensus 109 i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~DFGlA~ 155 (475)
.+..+-.++.-+|.. -++|+|+.|+|+|++ +.+.++|+||--|.
T Consensus 137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t---~~~~l~LIDWEyAg 182 (269)
T COG0510 137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLT---DKGGLFLIDWEYAG 182 (269)
T ss_pred HHHHHHHHhhhcCCCceeeecCCCCccceEEc---CCCcEEEEecccCC
Confidence 333444444444433 489999999999994 55899999998875
Done!