BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011884
(475 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077862|ref|XP_002305441.1| predicted protein [Populus trichocarpa]
gi|222848405|gb|EEE85952.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/473 (76%), Positives = 395/473 (83%), Gaps = 39/473 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG +LFPVQ+AVWQETIGPG FERDLCINSPTGSGKTL+YALPIVQ LS RAV+CLRAL
Sbjct: 50 MGFKTLFPVQIAVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRAL 109
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK VFAAIAP
Sbjct: 110 VVLPTRDLAL---------------------------------------QVKQVFAAIAP 130
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
A+GLSVGLAVGQSSIADEISELIK+P+ EAGICYDP+DVLQELQS+VDILVATPGRLMDH
Sbjct: 131 AMGLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRLMDH 190
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I T+GFTLEHLCYLVVDETDRLLRE+YQ+WLPTVL+LTR +E+ + FLP A GS
Sbjct: 191 ITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGVNNFLPCASGS 250
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
LKTIRRCGVERGFK K YPRL KMVLSATLTQDP+KLAQL+LHHPLFLTTG+ RY+LPE+
Sbjct: 251 LKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEK 310
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
LESYKLIC SKLKPLYLVA+LQ LG EKCIVFTSSVESTHRLCTLLN FG+L++KIKEYS
Sbjct: 311 LESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIKEYS 370
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
GLQRQSVRSKTLKAFREG+IQVLVSSDAMTRGMD+EGV N++NYD PAY+KTY+HRAGRT
Sbjct: 371 GLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNIINYDMPAYVKTYVHRAGRT 430
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
ARAGQ GRC TLL EVKRFKKLLQKADNDSCPI+SIPSS ++SL P Y S
Sbjct: 431 ARAGQTGRCITLLRTHEVKRFKKLLQKADNDSCPIYSIPSSSVKSLHPFYLSA 483
>gi|449433605|ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
gi|449490565|ref|XP_004158642.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
Length = 517
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/473 (76%), Positives = 394/473 (83%), Gaps = 39/473 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGISSLFPVQ+AVWQE IGPG F+RDLCINSPTGSGKTL+YALPIVQ LS+R V+CLRAL
Sbjct: 47 MGISSLFPVQLAVWQEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRAL 106
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF+AIAP
Sbjct: 107 VVLPTRDLAL---------------------------------------QVKEVFSAIAP 127
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP+D L ELQS+VDILVATPGRLMDH
Sbjct: 128 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPGRLMDH 187
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
IN T+GFTL+HL YLV+DETDRLLREAYQ+WLPTVLQLT +D+ + + P + GS
Sbjct: 188 INFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYISNPCSDGS 247
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
LKTIRR GVERGFK KPYPRL KMVLSATLTQDP KLAQLDLHHPLFLTTG+ RYKLPE+
Sbjct: 248 LKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEK 307
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
LESY +ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC+LLN F +L +KIKEYS
Sbjct: 308 LESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELKIKEYS 367
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
GLQRQS+RSKTL AFR G+IQVLVSSDAMTRGMDVEGV NV+NYD PA+IKTYIHRAGRT
Sbjct: 368 GLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTYIHRAGRT 427
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
ARAGQ GRCFTLL KDEVKRFKKLLQKADNDSCP+H++PSS IE L+P Y S
Sbjct: 428 ARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSA 480
>gi|225443938|ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
gi|297740757|emb|CBI30939.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/473 (74%), Positives = 389/473 (82%), Gaps = 39/473 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG SSLFPVQVAVWQET+GPG FERDLCINSPTGSGKTL+YALPIV LS+RAV+CLRAL
Sbjct: 47 MGFSSLFPVQVAVWQETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRAL 106
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VFAAIAP
Sbjct: 107 VVLPTRDLAL---------------------------------------QVKEVFAAIAP 127
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
AVGLSVGLAVGQ+SIADEISELIKRPKLEAGICYDPED+ ELQS+VDILVATPGRLMDH
Sbjct: 128 AVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVATPGRLMDH 187
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
IN T+GFTL+HL YLVVDETDRLLREAYQ+WLPTVLQLTRS +E+ F T LPS FGS
Sbjct: 188 INTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTILPSTFGS 247
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ TIRRCGVERGFK + YPRLVK+VLSATLTQDP+KLA LDLHHPL LT G+ RY+LPE+
Sbjct: 248 MNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEK 307
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+S+KLICESKLKPLYLVALL+ LG EKCIVFTSSVES HRLCTLLN FG+L+IKI EYS
Sbjct: 308 LKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQIKIGEYS 367
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
GLQ Q VRSKTL+ FR GKIQVL+SSD MTRGMDVEGV NV+NYD P +IKTYIHRAGRT
Sbjct: 368 GLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTYIHRAGRT 427
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
ARAGQ GRCFTLL KDE KRFK+LLQKAD+DSCP+HS+ S+ IE+L VY S
Sbjct: 428 ARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSA 480
>gi|5281020|emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
Length = 474
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/470 (69%), Positives = 376/470 (80%), Gaps = 39/470 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGISSLFPVQVAVW ETIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRAL
Sbjct: 1 MGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRAL 60
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVKDVF AIAP
Sbjct: 61 VVLPTRDLAL---------------------------------------QVKDVFDAIAP 81
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
AVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDH
Sbjct: 82 AVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDH 141
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
IN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGS
Sbjct: 142 INNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGS 201
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
L+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+
Sbjct: 202 LQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEK 261
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYS
Sbjct: 262 LECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYS 321
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS+RSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRT
Sbjct: 322 GGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRT 381
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
ARAGQ GRCFTLL EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 382 ARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATY 431
>gi|297804642|ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata]
gi|297316041|gb|EFH46464.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/470 (69%), Positives = 373/470 (79%), Gaps = 39/470 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGISSLFPVQVAVW ETIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRAL
Sbjct: 49 MGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQILASRPVRCLRAL 108
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVKDVF AIAP
Sbjct: 109 VVLPTRDLAL---------------------------------------QVKDVFDAIAP 129
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIA EIS+LIK PKL+AGICYDPED+ Q +SAVDILVATPGRLMDH
Sbjct: 130 TVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVATPGRLMDH 189
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
IN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ ++ F + F+PSAFGS
Sbjct: 190 INNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDGLFPSCTPFVPSAFGS 249
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
L+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+
Sbjct: 250 LRTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEK 309
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYS
Sbjct: 310 LECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYS 369
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QSVRSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRT
Sbjct: 370 GGLNQSVRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRT 429
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
ARAGQ GRCFTLL EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 430 ARAGQAGRCFTLLSNHEVRRFSKLLKKVGSDSCPIYPIPPTSLDSIRATY 479
>gi|240255886|ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 1
gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis thaliana]
Length = 522
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/470 (69%), Positives = 376/470 (80%), Gaps = 39/470 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGISSLFPVQVAVW ETIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRAL
Sbjct: 49 MGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRAL 108
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVKDVF AIAP
Sbjct: 109 VVLPTRDLAL---------------------------------------QVKDVFDAIAP 129
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
AVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDH
Sbjct: 130 AVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDH 189
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
IN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGS
Sbjct: 190 INNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGS 249
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
L+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+
Sbjct: 250 LQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEK 309
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYS
Sbjct: 310 LECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYS 369
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS+RSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRT
Sbjct: 370 GGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRT 429
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
ARAGQ GRCFTLL EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 430 ARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATY 479
>gi|357491905|ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 497
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/474 (65%), Positives = 361/474 (76%), Gaps = 40/474 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGIS+LFPVQVAVW ET+GPG FERD+C+NSPTGSGKTL+YALP+VQ LS R +CLRAL
Sbjct: 46 MGISNLFPVQVAVWHETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSGRVTKCLRAL 105
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VV+PTRDLALQV K VF A+A
Sbjct: 106 VVVPTRDLALQV---------------------------------------KQVFDAVAS 126
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV-LQELQSAVDILVATPGRLMD 179
+GL VGLAVGQSS+ADEISEL++ P + G CYDP + L QS VDILVATPGRLMD
Sbjct: 127 PLGLRVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGRLMD 186
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
HIN T GFTLEHL YLVVDETDRLLREAYQ+WLPTVL+L +S+++ +++F P +
Sbjct: 187 HINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSAS 246
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
+L+T RRCGVERGFKDKPYPRL KMVLSATLTQDP +L QL+LHHPL L G+ RY+LPE
Sbjct: 247 ALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPE 306
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
LESYKLICE K+KPLYL+ALL+SLGEEKC+VFT SV+STHRLC LLN F +LRI IKEY
Sbjct: 307 NLESYKLICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEY 366
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
S LQ Q VRSKTL FR+G QVL+SSDA+TRGMDVEGV NV+NYD P +IKT++HRAGR
Sbjct: 367 SSLQHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGR 426
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
TARAGQ GRCFTL+ +DEV+RFKKL+ KA+ SC H +PSS IE+L Y+S
Sbjct: 427 TARAGQTGRCFTLMSEDEVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYESA 480
>gi|255584180|ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 469
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/483 (67%), Positives = 365/483 (75%), Gaps = 74/483 (15%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG +SLF VQVAVWQETIGPG FERDLCIN+PTGSGKTL+YALPI+Q LS R+++CLRAL
Sbjct: 48 MGFTSLFAVQVAVWQETIGPGNFERDLCINAPTGSGKTLAYALPIIQMLSTRSIKCLRAL 107
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+VLPTRDLALQV K VFAA+AP
Sbjct: 108 IVLPTRDLALQV---------------------------------------KQVFAALAP 128
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV--LQELQSAVDILVATPGRLM 178
AVGLSVGLAVGQSSIA EISELIKRPKLEAGICYD +DV +QELQ++VDILVATPGRLM
Sbjct: 129 AVGLSVGLAVGQSSIAGEISELIKRPKLEAGICYDRDDVILMQELQTSVDILVATPGRLM 188
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DHI T+GFTLEHLCYL + ++ LTRS RF LP
Sbjct: 189 DHITNTKGFTLEHLCYLHLLDS-----------------LTRSTLLLRF------LPIII 225
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
++ VERGFK K YPRL KMVLSATLTQDP+KL QLDLHHPLFLTTG++RY+LP
Sbjct: 226 ----VLKDSSVERGFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTTGQSRYQLP 281
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
E+LESY++ICE KLKPLYLVALLQ+L EKCIVF SSVESTHRLCTLL FG+L++KIKE
Sbjct: 282 EKLESYRVICEPKLKPLYLVALLQNLVGEKCIVFASSVESTHRLCTLLKFFGDLKVKIKE 341
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
YSGLQ QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV NV+NYDKPAYIKTYIHRAG
Sbjct: 342 YSGLQHQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVRNVINYDKPAYIKTYIHRAG 401
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS------SLIESLRPVYKS 472
RTARAGQ+GRCFTLLHK+EV+ F+KLLQKADNDS P++S+P +L+ S P + S
Sbjct: 402 RTARAGQVGRCFTLLHKEEVRHFRKLLQKADNDSFPVYSLPPVTLSLFTLLMSQIPGWGS 461
Query: 473 GDV 475
G V
Sbjct: 462 GTV 464
>gi|3445416|emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana]
Length = 450
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 302/446 (67%), Positives = 352/446 (78%), Gaps = 39/446 (8%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLAL
Sbjct: 1 RDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLAL-------------- 46
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
QVKDVF AIAPAVGLSVG AVGQSSIA EIS+LIK
Sbjct: 47 -------------------------QVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIK 81
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDHIN T+GFTLEHL YLVVDETDRLL
Sbjct: 82 TPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLL 141
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
REAYQ+WLPTVLQLT++ +++ F + F+PSAFGSL+T+RR VERGFK KPYPRLVKM
Sbjct: 142 REAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKM 201
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
VLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+YL ALL+S
Sbjct: 202 VLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLGALLKSW 261
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
EKCI+FTSS E+T RLC LLN FG+ +IK KEYSG QS+RSK LKAFR+G IQVLV
Sbjct: 262 EGEKCIIFTSSGETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLV 321
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRTARAGQ GRCFTLL EV+RF KL
Sbjct: 322 ASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKL 381
Query: 445 LQKADNDSCPIHSIPSSLIESLRPVY 470
L+K +DSCPI+ IP + ++S+R Y
Sbjct: 382 LKKVGSDSCPIYPIPPTSLDSIRATY 407
>gi|47497023|dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
gi|47497232|dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
Length = 517
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/474 (60%), Positives = 344/474 (72%), Gaps = 42/474 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQVA W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRAL
Sbjct: 51 MGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRAL 110
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 111 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 131
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDH
Sbjct: 132 VVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFG 239
I+ T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N +SD + +
Sbjct: 192 ISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLH 249
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
L TIRR GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P
Sbjct: 250 PLTTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPT 309
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+L+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EY
Sbjct: 310 KLQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEY 369
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
S LQR+S R KTL AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGR
Sbjct: 370 SRLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGR 429
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
TARAG+ G CFT L K EVK F K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 430 TARAGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSA 483
>gi|115449213|ref|NP_001048386.1| Os02g0795900 [Oryza sativa Japonica Group]
gi|122170850|sp|Q0DWT8.1|RH1_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 1
gi|113537917|dbj|BAF10300.1| Os02g0795900 [Oryza sativa Japonica Group]
gi|215740532|dbj|BAG97188.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 521
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/474 (60%), Positives = 344/474 (72%), Gaps = 42/474 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQVA W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRAL
Sbjct: 55 MGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRAL 114
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 115 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 135
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDH
Sbjct: 136 VVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDH 195
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFG 239
I+ T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N +SD + +
Sbjct: 196 ISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLH 253
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
L TIRR GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P
Sbjct: 254 PLTTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPT 313
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+L+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EY
Sbjct: 314 KLQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEY 373
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
S LQR+S R KTL AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGR
Sbjct: 374 SRLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGR 433
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
TARAG+ G CFT L K EVK F K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 434 TARAGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSA 487
>gi|242066828|ref|XP_002454703.1| hypothetical protein SORBIDRAFT_04g035895 [Sorghum bicolor]
gi|241934534|gb|EES07679.1| hypothetical protein SORBIDRAFT_04g035895 [Sorghum bicolor]
Length = 519
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 292/476 (61%), Positives = 338/476 (71%), Gaps = 46/476 (9%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQ A W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ L R VRCLRAL
Sbjct: 54 MGIESFFPVQEAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLCKRKVRCLRAL 113
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 114 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 134
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIADE+S L+++PK E D E V E Q+ +DILVATPGRLMDH
Sbjct: 135 VVGLSVGSAVGQSSIADEVSRLVQKPKQEFYPTIDEEYVQMEPQTKIDILVATPGRLMDH 194
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS---DNENRFSDASTFLPSA 237
IN T GF+LEHL YLV+DETDR+LREAYQ+WLPTV+QLT S D+ D T L
Sbjct: 195 INMTNGFSLEHLQYLVIDETDRMLREAYQSWLPTVIQLTHSIGQDHSWHDIDGKTLL--- 251
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
L TIRR GVERGFK K YPRL K+VLSATLTQDP+KL+QL+LHHPL L +G+ RY++
Sbjct: 252 -HPLTTIRRSGVERGFKGKCYPRLAKIVLSATLTQDPSKLSQLELHHPLLLNSGKKRYRI 310
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
P +LESYKLIC+S LKPL L+ LLQ L KC+VFTSSVES+HRL TLL F L K
Sbjct: 311 PTKLESYKLICKSNLKPLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLCFFENLPFKFS 370
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
EYS LQR+S R KTL+AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRA
Sbjct: 371 EYSRLQRESTRRKTLEAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRA 430
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
GRTARAG+ G CFT L K EVK F K+L+KADN SC +HS+P IE+LRP + S
Sbjct: 431 GRTARAGESGSCFTFLRKHEVKTFDKMLKKADNASCSLHSLPEESIETLRPTFSSA 486
>gi|357137417|ref|XP_003570297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Brachypodium
distachyon]
Length = 522
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 292/476 (61%), Positives = 338/476 (71%), Gaps = 46/476 (9%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S F VQVA W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ LS R VRCLRAL
Sbjct: 56 MGIESFFSVQVATWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRAL 115
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 116 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 136
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSV AVGQSSIADEIS+LIK+ K E D E V E Q+ VDILVATPGRLMDH
Sbjct: 137 VVGLSVASAVGQSSIADEISDLIKKSKQELYATLDEEYVEMEPQTKVDILVATPGRLMDH 196
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN---RFSDASTFLPSA 237
IN T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+Q TRS N+N R + T L
Sbjct: 197 INMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQFTRSTNQNHPWRDTAGQTLL--- 253
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
L T RR GVERGFK K YPRL K+V SATLTQDP+KL+QL+LHHPL L +G+ RY++
Sbjct: 254 -HPLTTNRRSGVERGFKGKCYPRLAKIVCSATLTQDPSKLSQLELHHPLLLNSGKKRYRI 312
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
P +LESYKLIC + LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K
Sbjct: 313 PTKLESYKLICTTNLKPLCLIVLLQELHGEKCLVFTSSVESSHRLSTLLGFFEDLPFKFS 372
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
E+S LQR+S R KTL F+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRA
Sbjct: 373 EFSRLQRESTRRKTLADFKEGKIDVLIGTDIMARGIHIDGLKYVINYDMPPYVKTYIHRA 432
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
GRTARAG+ G CFTLL K EVK F K+L+KAD+ SC + S+P IE+ RPV+ S
Sbjct: 433 GRTARAGESGSCFTLLRKHEVKTFDKMLKKADDSSCSLRSLPDESIETFRPVFSSA 488
>gi|413939310|gb|AFW73861.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
1 [Zea mays]
gi|413939311|gb|AFW73862.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
2 [Zea mays]
Length = 523
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 288/473 (60%), Positives = 336/473 (71%), Gaps = 46/473 (9%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQ A W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ L R VRCLRAL
Sbjct: 54 MGIESFFPVQEAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLCTRKVRCLRAL 113
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 114 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 134
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIADE+S L+++P+ E D E V E ++ +DILVATPGRLMDH
Sbjct: 135 VVGLSVGSAVGQSSIADEVSSLVQKPRQEFYPTIDKEYVQMEPRTKIDILVATPGRLMDH 194
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS---DNENRFSDASTFLPSA 237
IN T GF+LEHL YLV+DETDR+LREAYQ+WLPTV+QLT S D+ D T L
Sbjct: 195 INMTNGFSLEHLQYLVIDETDRMLREAYQSWLPTVIQLTHSIGQDHSCHDIDGKTLL--- 251
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
L TIRR GVERGFK K YPRL K+VLSATLTQDP+KL+QL+LHHPL L +G+ RY++
Sbjct: 252 -HPLTTIRRSGVERGFKSKCYPRLAKIVLSATLTQDPSKLSQLELHHPLLLNSGKKRYRI 310
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
P +LESYKLIC+S LKPL L+ LLQ L KC+VFTSSVES+HRL TLL F L K
Sbjct: 311 PTKLESYKLICKSNLKPLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLRFFENLPFKFS 370
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
EYS LQR+S R KTL+AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRA
Sbjct: 371 EYSRLQRESTRRKTLEAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRA 430
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
GRTARAG+ G CFT L K EVK F K+L+KADN C +HS+P IE+LRP +
Sbjct: 431 GRTARAGESGSCFTFLRKHEVKTFDKMLKKADNAGCNLHSLPEESIETLRPAF 483
>gi|125541460|gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indica Group]
Length = 499
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/473 (59%), Positives = 334/473 (70%), Gaps = 58/473 (12%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQVA W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRAL
Sbjct: 51 MGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRAL 110
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 111 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 131
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDH
Sbjct: 132 VVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I+ T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N
Sbjct: 192 ISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQN--------------- 236
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +
Sbjct: 237 ----HSWGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTK 292
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS
Sbjct: 293 LQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYS 352
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
LQR+S R KTL AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRT
Sbjct: 353 RLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRT 412
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
ARAG+ G CFT L K EVK F K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 413 ARAGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSA 465
>gi|125584003|gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japonica Group]
Length = 499
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/473 (59%), Positives = 334/473 (70%), Gaps = 58/473 (12%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQVA W ETIGPG FERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRAL
Sbjct: 51 MGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRAL 110
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 111 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 131
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDH
Sbjct: 132 VVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I+ T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N
Sbjct: 192 ISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQN--------------- 236
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +
Sbjct: 237 ----HSWGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTK 292
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS
Sbjct: 293 LQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYS 352
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
LQR+S R KTL AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRT
Sbjct: 353 RLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRT 412
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
ARAG+ G CFT L K EVK F K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 413 ARAGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSA 465
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/475 (58%), Positives = 321/475 (67%), Gaps = 85/475 (17%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGIS LFPVQVA+WQET+GPG FERDLCINSPTGSGKTL+YALPIVQ L LRAL
Sbjct: 202 MGISKLFPVQVALWQETVGPGDFERDLCINSPTGSGKTLAYALPIVQNLFTNPGGRLRAL 261
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VV+PTRDLALQV K VF A+A
Sbjct: 262 VVVPTRDLALQV---------------------------------------KRVFDALAS 282
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLM 178
+GL +GLA GQSS+ E+S LI P + G DP L L QS VDILVATPGRL+
Sbjct: 283 PLGLRIGLAAGQSSLRHELSSLIYLPGEDDGP--DP-GFLSPLWFQSKVDILVATPGRLV 339
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+N +L+HL YLVVDE DRLLRE YQ+WLPTVL+LT+S
Sbjct: 340 DHVNK---LSLKHLRYLVVDEADRLLREDYQSWLPTVLKLTQS----------------- 379
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
RL K+VLSATLT+DP +LAQL+LHHPLFL+ G+ RY+LP
Sbjct: 380 ---------------------RLAKIVLSATLTRDPGRLAQLNLHHPLFLSAGKMRYRLP 418
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
E LE YKLICE K+KPLYLVALL+SLGEEKCIVFT SVESTH LC LLN FG+L+I IKE
Sbjct: 419 EYLECYKLICERKVKPLYLVALLKSLGEEKCIVFTRSVESTHHLCKLLNCFGDLKIGIKE 478
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
+SGL+ Q VRSKT+ FR G+ QVLVSSDAMTRGMDVEGV NV+NYD P Y KTY+HRAG
Sbjct: 479 FSGLKHQRVRSKTVGEFRRGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYTKTYVHRAG 538
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
RTARAGQ GRCFTL+ KDEV RFKKL++KA+ C +++PSSLIE+L Y+S
Sbjct: 539 RTARAGQTGRCFTLMSKDEVXRFKKLMKKAEASDCLEYTVPSSLIEALHSTYQSA 593
>gi|302794133|ref|XP_002978831.1| hypothetical protein SELMODRAFT_109199 [Selaginella moellendorffii]
gi|300153640|gb|EFJ20278.1| hypothetical protein SELMODRAFT_109199 [Selaginella moellendorffii]
Length = 513
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/476 (53%), Positives = 316/476 (66%), Gaps = 52/476 (10%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+GI SLFPVQ AVW ET+GPG RDL I+SPTGSGKTL+Y+LPI Q+LS +R LRAL
Sbjct: 42 VGIHSLFPVQAAVWHETVGPGGGARDLSISSPTGSGKTLAYSLPIAQSLSQCLLRRLRAL 101
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+V+PTRDLA+ QVK VF AIAP
Sbjct: 102 IVVPTRDLAM---------------------------------------QVKQVFDAIAP 122
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD----PEDVLQELQSAVDILVATPGR 176
+VGLSVG+AVGQ+S+A E S+L+ P + C+ D L E S VDILVATPGR
Sbjct: 123 SVGLSVGIAVGQTSVAAEASQLVLFPG-KIDTCFRELHLASDNLAE--SRVDILVATPGR 179
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
LMDHI T GFTLEHL YLVVDETDRLLREAYQ WLPTVL+ + N FS + P
Sbjct: 180 LMDHIQNTPGFTLEHLQYLVVDETDRLLREAYQEWLPTVLEAASAKN---FSPSDDSNP- 235
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETR 294
GS++TIRR +ERG K PRL K+++SATLT+DP K+AQL L+HPL L+T +
Sbjct: 236 GIGSVRTIRRSCLERGIKGCVVPRLQKIIVSATLTRDPAKIAQLRLYHPLSVALSTSDNL 295
Query: 295 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
YKLPE+L SY +IC+++ KPL LV LL SLG+++ ++FTSSV +THRL T L F +L
Sbjct: 296 YKLPEQLRSYTIICKAQQKPLKLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPF 355
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ EYS Q Q RSK L AFR G+ QVLV+SDAM RGMDVEGV +++NYD P + +TY+
Sbjct: 356 RAVEYSSFQHQLARSKALAAFRAGEAQVLVASDAMARGMDVEGVTHIINYDMPPFARTYV 415
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
HR GRTARAG+ G CFTLL K+EV+ FK +L K N SC + + S + LRP Y
Sbjct: 416 HRVGRTARAGRSGSCFTLLRKEEVRYFKSILAKVQNSSCKTYKVSSESTKELRPRY 471
>gi|302787757|ref|XP_002975648.1| hypothetical protein SELMODRAFT_174931 [Selaginella moellendorffii]
gi|300156649|gb|EFJ23277.1| hypothetical protein SELMODRAFT_174931 [Selaginella moellendorffii]
Length = 513
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/476 (53%), Positives = 316/476 (66%), Gaps = 52/476 (10%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+GI SLFPVQ AVW ET+GPG RDL I+SPTGSGKTL+Y+LPI Q+LS R +R LRAL
Sbjct: 42 VGIHSLFPVQAAVWHETVGPGGGARDLSISSPTGSGKTLAYSLPIAQSLSQRLLRRLRAL 101
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+V+PTRDLA+ QVK VF AIAP
Sbjct: 102 IVVPTRDLAM---------------------------------------QVKQVFDAIAP 122
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD----PEDVLQELQSAVDILVATPGR 176
+VGLS+G+AVGQ+S+A E S+L+ P + C+ D L E S VDILVATPGR
Sbjct: 123 SVGLSIGIAVGQTSVAAEASQLVLFPG-KTDTCFRELHLASDNLPE--SRVDILVATPGR 179
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
LMDHI T GFTLEHL YLVVDETDRLLREAYQ WLPTVL+ N + D++
Sbjct: 180 LMDHIQNTPGFTLEHLQYLVVDETDRLLREAYQEWLPTVLEAATGKNFSPSDDSN----P 235
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETR 294
GS++TIRR +ERG K PRL K+++SATLT+DP K+AQL L+HPL L+T +
Sbjct: 236 GIGSVRTIRRSCLERGIKGCVVPRLQKIIVSATLTRDPAKIAQLGLYHPLSIALSTSDNL 295
Query: 295 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
YKLPE+L SY +IC+++ KPL LV LL SLG+++ ++FTSSV +THRL T L F +L
Sbjct: 296 YKLPEQLRSYTIICKAQQKPLKLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPF 355
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ EYS Q Q RSK L AFR G+ QVLV+SDAM RGMDVEGV +++NYD P + +TY+
Sbjct: 356 RAVEYSSFQHQLARSKALAAFRAGEAQVLVASDAMARGMDVEGVTHIINYDMPPFARTYV 415
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
HR GRTARAG+ G CFTLL K+EV+ FK +L K N SC + + S + LRP Y
Sbjct: 416 HRVGRTARAGRSGSCFTLLRKEEVRYFKSILAKVQNSSCKTYKVSSESTKELRPRY 471
>gi|356554249|ref|XP_003545461.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 492
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/475 (52%), Positives = 300/475 (63%), Gaps = 85/475 (17%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGIS LFPV V +WQET+GP FERDLCINSPTG GKTL+YALP++Q L CLRAL
Sbjct: 77 MGISKLFPVXVTLWQETVGPSDFERDLCINSPTGRGKTLAYALPLIQNLFTDPGGCLRAL 136
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VV+PT D ALQV K VF A+A
Sbjct: 137 VVVPTHDFALQV---------------------------------------KRVFDALAS 157
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLM 178
+GL +GLA GQSS+ E S LI P+ + G +P L L QS V+ILVAT GRL+
Sbjct: 158 LLGLRIGLAAGQSSLRHEFSSLIFLPREDDGP--NP-GFLSSLWFQSKVNILVATLGRLV 214
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+N +L+HL YLVVDE DR L E YQ+WLPTV++LT+ F
Sbjct: 215 DHVNK---LSLKHLRYLVVDEADRFLHEDYQSWLPTVIKLTQ-----------------F 254
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
G L K+VL A LT+ P +LAQL LH+ LFL+ G+ Y+LP
Sbjct: 255 G---------------------LAKIVLFAMLTRGPGRLAQLILHYLLFLSAGKMCYRLP 293
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
E LE YKLICE K+KPLYLVALL+SLGEEKCIVFT VESTH LC LLN FG+L+I IKE
Sbjct: 294 EYLECYKLICERKVKPLYLVALLKSLGEEKCIVFTRFVESTHHLCKLLNFFGDLKIGIKE 353
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
+SGL+ Q VRSKT+ F+ + QVLVSSDAMTR MDVEG+ NV+NYD P Y KTY+HR G
Sbjct: 354 FSGLKHQQVRSKTVGEFQRREFQVLVSSDAMTRVMDVEGLRNVINYDVPKYTKTYVHRPG 413
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
RTARAGQ G CFTL+ KDEV F+KL++KA+ C H++PSSLIE+L Y S
Sbjct: 414 RTARAGQTGCCFTLMSKDEVGGFEKLMKKAEASDCLQHTVPSSLIEALHSTYSSA 468
>gi|168044025|ref|XP_001774483.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674195|gb|EDQ60707.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 462
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/446 (52%), Positives = 290/446 (65%), Gaps = 50/446 (11%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI +LFPVQVAVW + +GPG ERDLC+ SPTGSGKTLS+ALPIVQ LS R +R LRALV
Sbjct: 54 GIEALFPVQVAVWNQVLGPGGRERDLCVCSPTGSGKTLSFALPIVQLLSTRVLRRLRALV 113
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
VLPTRDLA+QV K VF +APA
Sbjct: 114 VLPTRDLAVQV---------------------------------------KSVFDILAPA 134
Query: 122 VGLSVGLAVGQSSIADEISELIK-RPKLEAGI-CYDPEDVLQELQSAVDILVATPGRLMD 179
VGLSVG+ VGQS++A E+ EL+K R +L Y+ + +S +DILVATPGRLMD
Sbjct: 135 VGLSVGI-VGQSTVAAEVGELVKTRSRLVHSFETYEAVENNLVYESCIDILVATPGRLMD 193
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF- 238
H+ T GFT+EHL YLVVDETDRLLR+ YQ+WLP VL + + RF D S
Sbjct: 194 HLKNTPGFTVEHLQYLVVDETDRLLRQDYQSWLPNVLNVIQI--PERFDDVSRRKAQCLR 251
Query: 239 --GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--TTGETR 294
G T RR +ERG K + +PR++K +LSATLT+DP K+AQLDL+ PL+L + E+R
Sbjct: 252 GTGVAFTQRRWCLERGSKGRVHPRVMKFLLSATLTKDPAKIAQLDLYWPLYLAPSAEESR 311
Query: 295 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-GELR 353
Y LP++L+++KLI + KPL LVALL+ + I+F +SVE+TH+L LL HF
Sbjct: 312 YHLPKQLKAFKLITRASKKPLVLVALLEQFKNQSTIIFNASVEATHQLFLLLRHFYAGQE 371
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+ EYS Q Q +R K L F +GK+ V+V+SDAMTRGMDVEGV NV+NYD P Y KTY
Sbjct: 372 FSVVEYSSRQPQHIRRKALADFTDGKVHVIVASDAMTRGMDVEGVANVINYDVPVYAKTY 431
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEVK 439
+HR GRTARAGQ GR FTLL K EV
Sbjct: 432 VHRVGRTARAGQAGRAFTLLVKKEVN 457
>gi|326532600|dbj|BAK05229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/349 (61%), Positives = 247/349 (70%), Gaps = 40/349 (11%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI S FPVQV+ W ETIGPG F+RD+CINSPTGSGKTL+YALPIVQ LS R VRCLRAL
Sbjct: 55 MGIESFFPVQVSAWLETIGPGAFQRDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRAL 114
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLAL QVK+VF AIAP
Sbjct: 115 VVLPTRDLAL---------------------------------------QVKEVFDAIAP 135
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VGL+V AVGQSSIADEIS+LIK+ K E D E V E Q+ VDILVATPGRLMDH
Sbjct: 136 VVGLTVASAVGQSSIADEISDLIKKSKQELYPSLDDEYVEMEPQTKVDILVATPGRLMDH 195
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
IN T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+Q TR ++ F +T +
Sbjct: 196 INMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQFTRPTKQDLFRHDTTGR-TLLHP 254
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
L TIRR GVERGFK K YPRL K+V SATLTQDP+KL+QL+LHHPL L +G+ RY++PE+
Sbjct: 255 LTTIRRSGVERGFKGKCYPRLAKIVCSATLTQDPSKLSQLELHHPLLLNSGKKRYRIPEK 314
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
LESYKLIC S +KPL L+ LLQ L EKC+VFT SV+ +HRL TLL F
Sbjct: 315 LESYKLICTSNIKPLCLIVLLQELRGEKCLVFTKSVDDSHRLSTLLGFF 363
>gi|2326341|emb|CAA72069.1| RH1 protein [Arabidopsis thaliana]
Length = 244
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/244 (72%), Positives = 211/244 (86%)
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F
Sbjct: 1 PGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPF 60
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+PSAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +
Sbjct: 61 VPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGS 120
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
RY+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +
Sbjct: 121 RYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPK 180
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
IK KEYSG QS+RSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+
Sbjct: 181 IKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTF 240
Query: 414 IHRA 417
IHRA
Sbjct: 241 IHRA 244
>gi|302839717|ref|XP_002951415.1| hypothetical protein VOLCADRAFT_61333 [Volvox carteri f.
nagariensis]
gi|300263390|gb|EFJ47591.1| hypothetical protein VOLCADRAFT_61333 [Volvox carteri f.
nagariensis]
Length = 654
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 202/487 (41%), Positives = 279/487 (57%), Gaps = 62/487 (12%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G LFPVQ AVWQ + G DLC+ +PTGSGKTL+YALP+V +L++ V CLRAL
Sbjct: 68 FGFPELFPVQTAVWQHSAGGTSTAHDLCVAAPTGSGKTLAYALPVVNSLAD--VGCLRAL 125
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VVLPTRDLA+QV DVF +
Sbjct: 126 VVLPTRDLAVQVY---------------------------------------DVFRPLCD 146
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAG----ICYDPEDVLQELQSAVDILVATPGR 176
AV L+V LA ++S A E + ++ P + + + D+LVATPGR
Sbjct: 147 AVQLNVALAAARTSEAAEAAAIVGLPASSSSSSPFVAGGGSAAAPGCRRGADVLVATPGR 206
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
LM H++ + G +L HL +LV DETDRLLR++YQ+WLP +L + + + + + P
Sbjct: 207 LMSHLSGSPGVSLRHLRFLVADETDRLLRQSYQSWLP---RLPEAVPKPKLHISPSDSPI 263
Query: 237 AFGSL-KTIRRCGVERGFKDKPYP--RLVKMVLSATLTQDPNKLAQLDLHHPLFL----- 288
FGSL + RR + + + R+VK+V+SATLT+DP KL +L LHHP F+
Sbjct: 264 LFGSLPRHARRSASSQTYIPCTHVMCRVVKIVVSATLTRDPAKLQRLALHHPRFVATATA 323
Query: 289 ------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 342
RY LP L Y+L+C + KPL L+ALLQ + IVFTSS+E TH+L
Sbjct: 324 AGGGGGGAAAGRYSLPRSLSEYRLMCSAARKPLVLLALLQEWSGQSTIVFTSSLEMTHKL 383
Query: 343 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 402
+L+ +L ++ EYS L R+ L+ FR G +++LV+SDAMTRGMDV+ V NV+
Sbjct: 384 FLMLSAVQDLPDEVVEYSSLVPVRARAAALERFRTGSVELLVASDAMTRGMDVDCVQNVI 443
Query: 403 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 462
NYD P Y KTY+HRAGRTARAG+ GR TLL ++++ FK ++ KADN+ + +PS
Sbjct: 444 NYDAPVYAKTYVHRAGRTARAGKPGRVITLLRDEDMRHFKAMIHKADNNFVREYKLPSER 503
Query: 463 IESLRPV 469
+E+LRP
Sbjct: 504 VEALRPA 510
>gi|384254028|gb|EIE27502.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 562
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 265/495 (53%), Gaps = 100/495 (20%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
G LFPVQ A WQ T G DLCI++PTGSGKTL+YALPI+Q L R V LR LV
Sbjct: 123 GFVELFPVQAAAWQVTAGGHSAAHDLCISAPTGSGKTLAYALPILQGLLGRCVPRLRCLV 182
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
VLPTRDLA QV VFA + P
Sbjct: 183 VLPTRDLAAQVFK---------------------------------------VFADLCPP 203
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS-----------AVDIL 170
+GL VG+A Q+S+ E + L D +++ QS AVDIL
Sbjct: 204 LGLRVGMAAAQTSVGTEAATLFP-------------DAIRDQQSIRGMAAVSNSSAVDIL 250
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
VATPGRLM H+ T G TL L YLV+DETDRLLR+AYQ WLP V T +
Sbjct: 251 VATPGRLMAHLKGTPGATLNDLRYLVIDETDRLLRQAYQDWLPFVTAATVGGPGD----- 305
Query: 231 STFLPSAFGSLKTIRRCGVE--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+R G + RG P ++K+V SATLT+DP+K+ +L L+ P ++
Sbjct: 306 -----------PPVRGPGGQPVRG----PQRHVLKIVASATLTRDPSKIERLGLNCPRYI 350
Query: 289 TTGET---------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
G + Y +P+ L+ +K++C KP+ VALL+ L E ++FT
Sbjct: 351 ALGASDHRHATILHLLSHAREYAMPKSLKEFKVVCAGADKPVLAVALLRQLANEPTLIFT 410
Query: 334 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
+SVE+T RL LL+ LR + E+S L R+ TL AFR G ++LV+SD MTRGM
Sbjct: 411 ASVEATRRLFVLLHAVPSLRESVLEFSSLNSGPERAATLAAFRGGDARILVASDGMTRGM 470
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 453
DV V NVVNYD P Y KTY+HRAGRTAR G+ GR FTLL +EV+ FK LL+K DN
Sbjct: 471 DVPSVANVVNYDAPIYAKTYVHRAGRTARGGREGRVFTLLRTEEVRHFKGLLRKVDNAFV 530
Query: 454 PIHSIPSSLIESLRP 468
+++P + +++ RP
Sbjct: 531 KDYALPKADVDAARP 545
>gi|356554241|ref|XP_003545457.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 333
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/367 (52%), Positives = 224/367 (61%), Gaps = 85/367 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGIS LFPVQV +W ET+GPG FERDLCI P SGKTL+YA PIVQ LS LRAL
Sbjct: 48 MGISKLFPVQVTLWXETVGPGDFERDLCIKLPIESGKTLAYAFPIVQNLSTDTGGRLRAL 107
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VV+PTRDL+LQV K VF A+A
Sbjct: 108 VVVPTRDLSLQV---------------------------------------KRVFDALAS 128
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLM 178
+GL + LA QSS+ ++S LI P + G DP L L QS VDILV TPGRL+
Sbjct: 129 LLGLRICLATDQSSLRHKLSSLIYLPGEDDG--QDP-GFLSSLWFQSKVDILVVTPGRLV 185
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+N +L+HL YL+VDE DRLLRE YQ+WLPTVL+LT+S
Sbjct: 186 DHVNK---LSLKHLRYLMVDEADRLLREDYQSWLPTVLKLTQS----------------- 225
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
RL K+VLSATLT+DP +LAQL+LHHPLFL+TG+ RY+LP
Sbjct: 226 ---------------------RLTKIVLSATLTRDPGRLAQLNLHHPLFLSTGKMRYRLP 264
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
E LE YKLICE K+KPLYLVALL+SLGEE CIVFT SVESTH LC LLN FG+L+I IKE
Sbjct: 265 EYLECYKLICERKVKPLYLVALLKSLGEENCIVFTRSVESTHHLCKLLNCFGDLKIGIKE 324
Query: 359 YSGLQRQ 365
+S L+ Q
Sbjct: 325 FSSLKHQ 331
>gi|356528222|ref|XP_003532704.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 341
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/370 (52%), Positives = 226/370 (61%), Gaps = 85/370 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGIS LF VQVA+WQET+G FERDLCINSPT SGKTL+YALPIVQ LS L AL
Sbjct: 44 MGISKLFSVQVALWQETVGSDDFERDLCINSPTESGKTLAYALPIVQNLSTNTSDRLFAL 103
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
VV+PTRDLALQV K VF A+A
Sbjct: 104 VVVPTRDLALQV---------------------------------------KRVFDALAS 124
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLM 178
++GL +GLA GQSS+ E+S LI P + G DP L L QS V+ILVATPGRLM
Sbjct: 125 SLGLHIGLAAGQSSLRHELSSLIYLPGEDDG--PDP-GFLSPLWFQSKVNILVATPGRLM 181
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+N +L+HL YLVVDE DRLLRE YQ+WLPTVL+LT+
Sbjct: 182 DHVNK---LSLKHLRYLVVDEADRLLREDYQSWLPTVLKLTQF----------------- 221
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
RL K+VLS LT DP +LA L+LHHPLFL+ G+ RY+L
Sbjct: 222 ---------------------RLAKIVLSVILTLDPGRLAXLNLHHPLFLSAGKMRYRLL 260
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
E LE +KLICE K+KPLYLV LL+SLG+EKCIVFT SVESTH LC LLN FG+L+I IKE
Sbjct: 261 EYLECFKLICERKVKPLYLVTLLKSLGKEKCIVFTRSVESTHHLCKLLNCFGDLKIGIKE 320
Query: 359 YSGLQRQSVR 368
+SGL+ Q V+
Sbjct: 321 FSGLKHQLVQ 330
>gi|194214438|ref|XP_001915702.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Equus caballus]
Length = 550
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 259/501 (51%), Gaps = 94/501 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 98 GISSYFPVQAAVIPALLESMANGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPLVQALLH 157
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 158 RAVCQVRALVVLPTKELAQQVS---------KVFNVYTD--------------------- 187
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ ++A E L++R + + DI+V
Sbjct: 188 ---------ATPLRVALVTGQKTLAKEQETLVQR-------------TVDGFRCLADIVV 225
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ--LTRSDNENRFSD 229
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ R ++ FS
Sbjct: 226 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVMAAAFPREGTKSLFSL 285
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
P A + T C P L K++ SATLTQ+P KL QL LH P +
Sbjct: 286 LQRRQPQAITAASTC--C---------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFS 334
Query: 290 TG-----------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
TG +Y P L + + C + KPL ++ L+ + + + F
Sbjct: 335 TGLAQRGSRDADAEADGESAGKYTFPAGLTHHYVPCSLRSKPLVVLHLVLEMNFSRVLCF 394
Query: 333 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
T+S E++HRL L FG + + E+S R LK F +GKIQ+L+S+DAM RG
Sbjct: 395 TNSRENSHRLFLLAQAFGG--VSVAEFSSRYGPGQRKMILKQFEQGKIQLLISTDAMARG 452
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDS 452
+DV+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +
Sbjct: 453 IDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLAEGGVPE 512
Query: 453 CPIHSIPSSLIESLRPVYKSG 473
H PS L++ L P Y++
Sbjct: 513 LERHDTPSKLLQPLVPRYEAA 533
>gi|344299254|ref|XP_003421302.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Loxodonta africana]
Length = 690
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 257/497 (51%), Gaps = 90/497 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G F RDLC+++PTGSGKTL++ +P+VQTL +
Sbjct: 238 GISSYFPVQAAVIPALLESAAGGFLVGRGGFRPRDLCVSAPTGSGKTLAFVIPVVQTLLH 297
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QVN +F + D
Sbjct: 298 RVVCRIRALVVLPTKELAQQVN---------RVFNIYTD--------------------- 327
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + C DI+V
Sbjct: 328 ---------ATPLRVALVTGQKSLAKEQESLVQK-SADGYRCL------------ADIVV 365
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 366 ATPGRLVDHIDQTAGFSLQQLRFLVIDEADRMVDSMHQSWLPRVVAAA-------FQSQG 418
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A +R V P L K++ SATLTQ+P KL QL LH P + G
Sbjct: 419 PADPCALLQRGPLR--AVTAASTWAPQMPLQKLLFSATLTQNPEKLQQLALHQPRLFSAG 476
Query: 292 -ETR----------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
E+R Y PE L + + C KPL ++ L+ ++ + + FT+
Sbjct: 477 LESRGLEGTGDDVAGDMGGKYAFPEGLAHHYVPCSLSTKPLAVLHLVLTMRFSRVLCFTN 536
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E++HRL L+ FG + + E+S R +TLK F +GKIQ+LVS+DA RG+D
Sbjct: 537 SRENSHRLFLLVQAFGG--VSVAEFSSRHGPGQRKRTLKKFEQGKIQLLVSTDATARGID 594
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
V+GV V+NYD P Y +TY+HR GRTARAG+ G+ FTLL + + +RF ++L A
Sbjct: 595 VQGVELVLNYDAPQYARTYVHRVGRTARAGRAGQAFTLLLRVQERRFLRMLAGAGVLELR 654
Query: 455 IHSIPSSLIESLRPVYK 471
H IP L++ L P Y+
Sbjct: 655 RHEIPGELLQPLVPCYE 671
>gi|355786666|gb|EHH66849.1| hypothetical protein EGM_03914, partial [Macaca fascicularis]
Length = 494
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 255/496 (51%), Gaps = 87/496 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 45 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 104
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QVN +F + D
Sbjct: 105 RVVCHIRALVVLPTKELAQQVN---------KVFNIYTD--------------------- 134
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 135 ---------ATPLRVSLITGQKSLAKEQESLVQK-------------TADGFRCLADIVV 172
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 173 ATPGRLVDHIDQTPGFNLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSED 225
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A + ++ V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 226 PTDPCALLQRRQVQ--AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 283
Query: 292 ETR--------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
R Y P L + + C KPL ++ L+ +G K + FT+S E
Sbjct: 284 LARRGLEDTDGDGDLGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSKVLCFTNSRE 343
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R + LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 344 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRRILKQFEQGKIQLLISTDATARGIDVQG 401
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HRAGRTARAG++G+ FTLL K + +RF ++L +A H
Sbjct: 402 VELVVNYDAPQYLRTYVHRAGRTARAGKMGQAFTLLLKVQERRFLQMLTEAGAPELRRHE 461
Query: 458 IPSSLIESLRPVYKSG 473
+ S L++ L P Y+
Sbjct: 462 LSSKLLQPLVPQYEEA 477
>gi|297484677|ref|XP_002694482.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
gi|296478689|tpg|DAA20804.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Bos taurus]
Length = 555
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 256/497 (51%), Gaps = 90/497 (18%)
Query: 2 GISSLFPVQVAV----WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV + T L R DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 103 GISSYFPVQAAVIPAVLESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLH 162
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 163 RAVCQVRALVVLPTKELAQQVS---------KVFNVYTD--------------------- 192
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 193 ---------ATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCLADIMV 230
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V+ R +
Sbjct: 231 ATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR-DPCA 289
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F + L C P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 290 VFQRTQPRVLTAASMCC--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTG 341
Query: 292 ET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
+Y P L+ + + C + KPL ++ L+ + + + FT+
Sbjct: 342 SAHRGPSDPDIDVDEDSGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVLCFTN 401
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DAM RG+D
Sbjct: 402 SRENSHRLFLLVQAFGG--VTVAEFSSRYGPGQRKSILKQFEQGKIQLLISTDAMARGID 459
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
V+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L++
Sbjct: 460 VQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFTLLLKVQERRFLRMLEEGGVPGLE 519
Query: 455 IHSIPSSLIESLRPVYK 471
H PS L++ L P Y+
Sbjct: 520 RHDTPSELLQPLVPQYE 536
>gi|194674602|ref|XP_001787674.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
Length = 565
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 256/497 (51%), Gaps = 90/497 (18%)
Query: 2 GISSLFPVQVAV----WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV + T L R DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 113 GISSYFPVQAAVIPAVLESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLH 172
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 173 RAVCQVRALVVLPTKELAQQVS---------KVFNVYTD--------------------- 202
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 203 ---------ATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCLADIMV 240
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V+ R +
Sbjct: 241 ATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR-DPCA 299
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F + L C P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 300 VFQRTQPRVLTAASMCC--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTG 351
Query: 292 ET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
+Y P L+ + + C + KPL ++ L+ + + + FT+
Sbjct: 352 SAHRGPSDPDIDVDEDSGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVLCFTN 411
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DAM RG+D
Sbjct: 412 SRENSHRLFLLVQAFGG--VTVAEFSSRYGPGQRKSILKQFEQGKIQLLISTDAMARGID 469
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
V+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L++
Sbjct: 470 VQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFTLLLKVQERRFLRMLEEGGVPGLE 529
Query: 455 IHSIPSSLIESLRPVYK 471
H PS L++ L P Y+
Sbjct: 530 RHDTPSELLQPLVPQYE 546
>gi|109099284|ref|XP_001105887.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Macaca mulatta]
Length = 664
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 255/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 215 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 274
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QVN +F + D
Sbjct: 275 RVVCHIRALVVLPTKELAQQVN---------KVFNIYTD--------------------- 304
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 305 ---------ATPLRVSLITGQKSLAKEQESLVQK-------------TADGFRCLADIVV 342
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 343 ATPGRLVDHIDQTPGFNLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSED 395
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A + ++ V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 396 PTDPCALLQRRQVQ--AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 453
Query: 292 ETR--------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
R Y P L + + C KPL ++ L+ +G K + FT+S E
Sbjct: 454 LARRGLEDTDGDGDLGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSKVLCFTNSRE 513
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R + LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 514 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRRILKQFEQGKIQLLISTDATARGIDVQG 571
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HRAGRTARAG++G+ FTLL K + +RF ++L +A H
Sbjct: 572 VELVVNYDAPQYLRTYVHRAGRTARAGKMGQAFTLLLKVQERRFLQMLTEAGAPELRRHE 631
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 632 LSSKLLQPLVPRYE 645
>gi|281340804|gb|EFB16388.1| hypothetical protein PANDA_012336 [Ailuropoda melanoleuca]
Length = 490
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 255/497 (51%), Gaps = 87/497 (17%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV E+ G RDLC+++PTGSGKTL++ +P+VQ L
Sbjct: 44 GISSYFPVQAAVIPALLESTANGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLR 103
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+
Sbjct: 104 RAVCQVRALVVLPTKELAQQVSK------------------------------------- 126
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF + A L V L GQ S+ E L+++ + D++V
Sbjct: 127 --VFNSYTDATPLRVALITGQKSLVKEQESLVQK-------------TADGFRCLADVVV 171
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+HL +LV+DE DR++ +Q+WLP V++ SD +
Sbjct: 172 ATPGRLVDHIDQTPGFSLQHLRFLVIDEADRMIDSMHQSWLPRVVEAVFR------SDGA 225
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 226 KDRPLAL--LQRRQPQATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTG 283
Query: 292 ETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
R Y P L + + C + KPL ++ L+ + + FT+S
Sbjct: 284 LARRGPRDADEDRDSGGKYTFPTGLSHHYVPCSLRTKPLAVLHLILEKNFSRVLCFTNSR 343
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E++HRL L+ FG + E+S S R LK F +GKIQ+L+S+DAM RG+DV+
Sbjct: 344 ENSHRLFLLVQAFGG--VTAAEFSSRCGPSQRKVVLKQFEQGKIQLLISTDAMARGIDVQ 401
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F ++L +A H
Sbjct: 402 GVQRVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLRMLAEAGVPEMARH 461
Query: 457 SIPSSLIESLRPVYKSG 473
IP+ L++ L P Y+
Sbjct: 462 DIPNELLQPLLPRYEEA 478
>gi|301775625|ref|XP_002923233.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Ailuropoda
melanoleuca]
Length = 517
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 255/497 (51%), Gaps = 87/497 (17%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV E+ G RDLC+++PTGSGKTL++ +P+VQ L
Sbjct: 66 GISSYFPVQAAVIPALLESTANGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLR 125
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+
Sbjct: 126 RAVCQVRALVVLPTKELAQQVSK------------------------------------- 148
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF + A L V L GQ S+ E L+++ + D++V
Sbjct: 149 --VFNSYTDATPLRVALITGQKSLVKEQESLVQK-------------TADGFRCLADVVV 193
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+HL +LV+DE DR++ +Q+WLP V++ SD +
Sbjct: 194 ATPGRLVDHIDQTPGFSLQHLRFLVIDEADRMIDSMHQSWLPRVVEAVFR------SDGA 247
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 248 KDRPLAL--LQRRQPQATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTG 305
Query: 292 ETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
R Y P L + + C + KPL ++ L+ + + FT+S
Sbjct: 306 LARRGPRDADEDRDSGGKYTFPTGLSHHYVPCSLRTKPLAVLHLILEKNFSRVLCFTNSR 365
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E++HRL L+ FG + E+S S R LK F +GKIQ+L+S+DAM RG+DV+
Sbjct: 366 ENSHRLFLLVQAFGG--VTAAEFSSRCGPSQRKVVLKQFEQGKIQLLISTDAMARGIDVQ 423
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F ++L +A H
Sbjct: 424 GVQRVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLRMLAEAGVPEMARH 483
Query: 457 SIPSSLIESLRPVYKSG 473
IP+ L++ L P Y+
Sbjct: 484 DIPNELLQPLLPRYEEA 500
>gi|291412934|ref|XP_002722733.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Oryctolagus
cuniculus]
Length = 507
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 259/498 (52%), Gaps = 92/498 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GIS+ FPVQ AV +G G ++ RDLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 57 GISAYFPVQAAVIPVVLESAASGFLVGRGGYQPRDLCVSAPTGSGKTLAFVIPVVQALLH 116
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 117 RVVCQIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 146
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L++R + DI+V
Sbjct: 147 ---------ATPLRVALVTGQRSLAKEQEGLVQR-------------TADGYRCLADIVV 184
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ--LTRSDNENRFSD 229
ATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+ R + S
Sbjct: 185 ATPGRLVDHIDQTPGFHLQQLRFLVIDEADRMVDSMHQSWLPRVVAAAFQREGPGDLCSV 244
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
P A + T R P L K++ SATLTQDP +L +L LH P +
Sbjct: 245 LQRSQPPAVTAASTCR-----------PQVPLQKLLFSATLTQDPERLQRLGLHQPRLFS 293
Query: 290 TGET---------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
+G+ +Y P L + + C + KPL ++ L+ L + + FT+
Sbjct: 294 SGQAHGGSRDGEERGGLAGKYDFPAGLTHHYVPCRLRSKPLVVLHLILELKFSRVLCFTN 353
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E++HRL L+ FG + + E+S R LK F++GKIQ+LVS+DA RG+D
Sbjct: 354 SRENSHRLFLLVQAFGG--VSVAEFSSRCGPGQRRGILKRFQQGKIQLLVSTDAAARGID 411
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
V+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L++A
Sbjct: 412 VQGVELVVNYDAPQYLRTYVHRVGRTARAGRTGQAFTLLLKVQERRFLQMLEEAGAPRLQ 471
Query: 455 IHSIPSSLIESLRPVYKS 472
H PS L++ L P Y++
Sbjct: 472 RHETPSELLQPLVPRYEA 489
>gi|302683871|ref|XP_003031616.1| hypothetical protein SCHCODRAFT_55946 [Schizophyllum commune H4-8]
gi|300105309|gb|EFI96713.1| hypothetical protein SCHCODRAFT_55946 [Schizophyllum commune H4-8]
Length = 566
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 259/517 (50%), Gaps = 99/517 (19%)
Query: 1 MGISSLFPVQVAVW--------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+GI+ LF VQ A+ + P RD C+++PTGSGKTL+Y PIV+ LS+R
Sbjct: 98 LGITELFAVQTALLPFLLANPSRAVYTPYNLPRDACVSAPTGSGKTLAYVTPIVEVLSSR 157
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
LRALVV+PTRDL + QVK
Sbjct: 158 ITTRLRALVVVPTRDL---------------------------------------VTQVK 178
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+ F A+ GL +G+ GQ S + E S+++ D L S VDIL+
Sbjct: 179 ETFEAVGKGRGLKIGVVTGQHSFSHEQSQIVG----------DSTTSLAGGTSKVDILIC 228
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DH+N T FTL+HL +L++DE DRLL +++Q WL TVL T S +
Sbjct: 229 TPGRLIDHLNGTTNFTLQHLRFLIIDEADRLLAQSFQGWLSTVLAATTQSTVPSTSSQDS 288
Query: 233 FLPSAFGSLKTIRRCGVERGFK-------DKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 285
LP A + + GF ++P K++ SATLTQDP KLA L+LH+P
Sbjct: 289 NLPRAEAAAPHVVPA---LGFPNVLSRQPERPRSSCQKLLFSATLTQDPGKLAALNLHNP 345
Query: 286 LF-----------LTTG---------ETRYKLPERLESYKLICESKLKPLYLVALLQSLG 325
+ +T+G R+ +PE L + +C+ KPL L+ S G
Sbjct: 346 KYFIVRSKAKRETITSGILPDVADVVMERFSMPEGLTEHMAVCDPADKPLAFFHLITSHG 405
Query: 326 EEKCIVFTSSVESTHRLCTLLNHFGELR-----------IKIKEYSGLQRQSVRSKTLKA 374
+VFT S EST RL L F + R + I YS + R L+
Sbjct: 406 IRNALVFTKSAESTTRLVRLFEFFEKARAERSPAGDSRPVTISAYSSDLGGAERRAILER 465
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
FR+ +IQ+LV+SD ++RG+DV V++VV+YD P ++ Y+HR GRTARAG+ G +TL+
Sbjct: 466 FRKQEIQILVASDLISRGLDVSHVSHVVSYDAPVDVRKYVHRVGRTARAGRAGSAWTLVE 525
Query: 435 KDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVY 470
+ E + FK ++++AD+ S + +E LRP+Y
Sbjct: 526 EQEARYFKNMMKEADHLPSLKKVKVDRKEMEELRPLY 562
>gi|73994975|ref|XP_543351.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Canis lupus
familiaris]
Length = 631
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 255/496 (51%), Gaps = 90/496 (18%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV E+I G DLC+++PTGSGKTL++ +P+VQ L
Sbjct: 181 GISSYFPVQAAVIPTLLESIANGFLVARGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLC 240
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 241 RAVCQVRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 270
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+ E L+++ + + D++V
Sbjct: 271 ---------ATPLRVALITGQKSLVKEQESLVQK-------------TVDGFRCLADVVV 308
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT-RSDNENRFSDA 230
ATPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V++ SD N
Sbjct: 309 ATPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVEAAFPSDVAN----- 363
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
F L+ + P L K++ SATLTQ+P KL QL L+ P +T
Sbjct: 364 -----DPFALLQRRQLQATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFST 418
Query: 291 G---------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 335
G +Y P L + + C + KPL ++ L+ + + FT+S
Sbjct: 419 GLAGRGPRDIDRDGESGGKYTFPTGLSHHYVPCSLRTKPLAILHLILERNFSRVLCFTNS 478
Query: 336 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
E++HRL L+ FG + E+S R R LK F +GKIQ+L+S+DAM RG+DV
Sbjct: 479 RENSHRLFLLVQAFGG--VAAAEFSSRCRPGQRKVVLKQFEQGKIQLLISTDAMARGIDV 536
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 455
+GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A
Sbjct: 537 QGVQLVINYDAPQYLRTYVHRVGRTARAGRTGQAFTLLLKVQERRFLQMLAEAGVPKMAR 596
Query: 456 HSIPSSLIESLRPVYK 471
H I S L++ L P Y+
Sbjct: 597 HDIHSELLQPLVPRYE 612
>gi|449543170|gb|EMD34147.1| hypothetical protein CERSUDRAFT_125827 [Ceriporiopsis subvermispora
B]
Length = 699
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 261/532 (49%), Gaps = 113/532 (21%)
Query: 1 MGISSLFPVQVAVWQETIG---------PGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+G+S LF VQ AV + P RDLC+++PTGSGKTL+Y LPI +TL++
Sbjct: 209 LGVSELFAVQTAVIPFLLASSRLRSLYLPYDPPRDLCVSAPTGSGKTLAYVLPITETLTS 268
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V LRALVVLPTRDL VN QV
Sbjct: 269 RIVTRLRALVVLPTRDL---VN------------------------------------QV 289
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELI---KRPKLEAGICYDPEDVLQELQSAVD 168
++ F A+A GL +G A GQ S A E ++L+ RP +Q S VD
Sbjct: 290 RETFEAVAKGRGLKIGTATGQHSFAHEQAQLVAERSRP-------------VQGGSSKVD 336
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
IL+ TPGRL+DH+N T F+L+HL YLV+DE DRLL +++Q WL VL T + R
Sbjct: 337 ILICTPGRLIDHLNGTPNFSLQHLRYLVIDEADRLLAQSFQDWLAQVLSATNA--PQRLD 394
Query: 229 DA-----------STFLPSAFGSLKTI---------RRCGVERGFKDKPYPRLVKMVLSA 268
DA ST P+A + R +K K++ SA
Sbjct: 395 DAETSSISEGRLSSTSSPTAIPYPDALSPAFLHLLDRMPASTTDVDEKTEASCQKLLFSA 454
Query: 269 TLTQDPNKLAQLDLHHP-LFLTTGET----------------RYKLPERLESYKLICESK 311
TLT+DP+K+A L+LH P F+ T ++ +P L ++CE+
Sbjct: 455 TLTRDPSKIAALNLHSPKYFVVQSRTDRSDSKEDGVLNIVMEKFSMPSTLSENMIVCETS 514
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSGL 362
KPL L L+ + +VFT S EST RL L F G RI +K YS
Sbjct: 515 EKPLMLFHLVHAHSVTNALVFTKSAESTARLVRLFEFFEAAQSSTAQGSARIVVKAYSSD 574
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
S R L+ F+ KI +LV SD ++RG+D+ V++VV+YD P ++ Y+HR GRTAR
Sbjct: 575 LSPSERKSILEQFKNQKIHILVCSDLISRGIDISHVSHVVSYDAPVDMRKYVHRVGRTAR 634
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVYKSG 473
AG+ G +TL+ + E + FK +L++AD+ D + LRP Y++
Sbjct: 635 AGRFGSAWTLVEEQEARYFKSMLKEADHLDKVKRLRVSEKETTPLRPAYENA 686
>gi|348688141|gb|EGZ27955.1| hypothetical protein PHYSODRAFT_258291 [Phytophthora sojae]
Length = 550
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 254/503 (50%), Gaps = 86/503 (17%)
Query: 1 MGISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
+ I S FPVQ VA+ + D+CI++PTGSGKTL+Y +PIVQ L R V +RA
Sbjct: 38 LSIRSFFPVQAVAIPKILASDSDRVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRA 97
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
L+VLP+RDLA+QV H I + V+
Sbjct: 98 LIVLPSRDLAVQV------------------HQIVQQFVK-------------------- 119
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L GLA+GQS+ A E S L+ E +S VDILVATPGRL+D
Sbjct: 120 -GTPLKCGLAIGQSNFAVEQSALVGDVSGE-----KVSSTTDGGRSLVDILVATPGRLVD 173
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ T GFTL+HL ++VDE DRLL ++YQ W+P V + E D A G
Sbjct: 174 HLEQTPGFTLQHLQIMIVDEADRLLNQSYQDWIPKVYASVFNGQE---VDEEGL---ALG 227
Query: 240 SLKTIRRC-GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE------ 292
T RR + R P L +++LSATLT++P KLA + + + G
Sbjct: 228 VGVTCRRQDSINRRRIRTP---LTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLA 284
Query: 293 -------------------------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
Y P LE Y + C++ KPL L+ LL
Sbjct: 285 DNAKQGTAGDSDDDDEDGEEASGSAKMYSTPTNLEEYWIECDTGSKPLVLLELLSEFAGA 344
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
IVFT+SV STHRL LL + +I+E+S Q RS + F+ G+++ +V SD
Sbjct: 345 LSIVFTASVNSTHRLARLLQLYSTHPERIREFSSSLSQKQRSALVADFKAGRVETVVCSD 404
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
AM RGMD+E V NVVNYD P++IKTYIHR GRTARAG+ GRC TL+ ++K ++L+K
Sbjct: 405 AMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLKK 464
Query: 448 ADNDSCPIHSIPSSLIESLRPVY 470
ADN+ + + +++L P Y
Sbjct: 465 ADNNKLKPYPLQQEHMKTLVPRY 487
>gi|297693495|ref|XP_002824053.1| PREDICTED: ATP-dependent RNA helicase DDX51 isoform 1 [Pongo
abelii]
Length = 672
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 255/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 223 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 282
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 283 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 312
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 313 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 350
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ +
Sbjct: 351 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCA 409
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F ++ C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 410 LFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 461
Query: 292 ET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
T +Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 462 LTHRGLEDTDGDGDSEKYAFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCFTNSRE 521
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 522 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 579
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 580 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 639
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 640 LSSKLLQPLVPRYE 653
>gi|426247154|ref|XP_004017351.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51
[Ovis aries]
Length = 676
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 254/497 (51%), Gaps = 90/497 (18%)
Query: 2 GISSLFPVQVAV----WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV + T L R DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 224 GISSYFPVQAAVIPALLESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLH 283
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 284 RAVCQVRALVVLPTKELAQQVS---------KVFNVYTD--------------------- 313
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 314 ---------ATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCLADIMV 351
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DH++ T GF+L+HL +L++DE DR++ +Q+WLP V+ F
Sbjct: 352 ATPGRLVDHVDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FPSEG 404
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 405 PKDPCAL--LQRTQPRVVTAASMCCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTG 462
Query: 292 ET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
+Y P L + + C + KPL ++ L+ + + + FT+
Sbjct: 463 SAYRAPSNPGIDVDGDSGGKYTFPVGLTHHYVPCSLRFKPLVILHLILEMNFSRVLCFTN 522
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+D
Sbjct: 523 SRENSHRLFLLVQAFGG--VTVAEFSSRYGPGQRKSILKQFEQGKIQLLISTDATARGID 580
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
V+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF +L++
Sbjct: 581 VQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFTLLLKVQERRFLHMLEEGGVPGME 640
Query: 455 IHSIPSSLIESLRPVYK 471
H PS L++ L P Y+
Sbjct: 641 RHDTPSELLQPLVPRYE 657
>gi|297693497|ref|XP_002824054.1| PREDICTED: ATP-dependent RNA helicase DDX51 isoform 2 [Pongo
abelii]
Length = 665
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 255/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 216 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 275
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 276 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 305
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 306 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 343
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ +
Sbjct: 344 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCA 402
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F ++ C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 403 LFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 454
Query: 292 ET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
T +Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 455 LTHRGLEDTDGDGDSEKYAFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCFTNSRE 514
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 515 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 572
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 573 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 632
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 633 LSSKLLQPLVPRYE 646
>gi|25455599|gb|AAH40185.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sapiens]
Length = 666
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 253/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 217 GISSYFPVQAAVIPALLESAACGFLVGRGGYRLSDLCVSAPTGSGKTLAFVIPVVQALLS 276
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 277 RVVCHIRALVVLPTKELARQVS---------KVFNIYTD--------------------- 306
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 307 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 344
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ F
Sbjct: 345 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSED 397
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A LK + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 398 PADPCAL--LKRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 455
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 456 LAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 515
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 516 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 573
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 574 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 633
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 634 LSSKLLQPLVPRYE 647
>gi|449663831|ref|XP_002165436.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Hydra
magnipapillata]
Length = 734
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 241/463 (52%), Gaps = 92/463 (19%)
Query: 2 GISSLFPVQVAV----WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 57
GI LFPVQ AV +T RD+C+ +PTGSGKTLSY LP++++L+ V+ L
Sbjct: 225 GIEHLFPVQTAVITYMHSQTKMLNFPPRDICVEAPTGSGKTLSYVLPVIESLTQYIVKEL 284
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
LVVLP++DLA+QV K VF++
Sbjct: 285 YCLVVLPSKDLAIQV---------------------------------------KQVFSS 305
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+ VGL G ++ E S+L+ C P+ + + V+ILVATPGRL
Sbjct: 306 YLKGTNIKVGLICGVKTLEKERSKLV---------CKGPQGYM----NMVEILVATPGRL 352
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ T GF+L+HL +LV+DE DRLL + Y WL VL+ +S + +F T
Sbjct: 353 VDHLKTTSGFSLKHLRFLVIDEADRLLSQDYSGWLELVLESAQSLSYRKFPHPLTV---- 408
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT------- 290
R F+ P L K++ SATLTQ+P KLA L L++P+ +
Sbjct: 409 -------------RTFQKNIIP-LQKLLFSATLTQNPEKLAPLRLYNPILFISKRDNEKT 454
Query: 291 ---------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 341
E R+ +PE+L +I + +LKPL +V L+ L ++ + FT S+E+THR
Sbjct: 455 KKDGSTENKSEFRFIVPEQLVEKMVIVKEELKPLVIVHLMLKLKYKRILCFTKSIEATHR 514
Query: 342 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 401
L LL G + E+S ++ R ++ F+ G I L+SSDAM RGMD++ VN V
Sbjct: 515 LHLLLQSIGGFTVA--EFSSNLTETQRKGIIRDFKNGSIDALISSDAMARGMDIDNVNMV 572
Query: 402 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
VNYD PA KTY+HR GRTARAG G T+L K +V FKK+
Sbjct: 573 VNYDSPANSKTYVHRVGRTARAGNRGEALTILTKKKVYPFKKM 615
>gi|355683374|gb|AER97086.1| DEAD box polypeptide 51 [Mustela putorius furo]
Length = 474
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 251/497 (50%), Gaps = 88/497 (17%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV E+ G RDLC+++PTGSGKTL++ +P+VQ L
Sbjct: 26 GISSYFPVQAAVIPALLESTADGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLG 85
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RA+ +RALVVLPT++LA QV CK +F + D
Sbjct: 86 RAICQVRALVVLPTKELAQQV--------CK-VFNIYTD--------------------- 115
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+ E L+++ + D++V
Sbjct: 116 ---------ATPLRVALITGQKSLVKEQESLVQK-------------TADGFRCLADVVV 153
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L HL +LV+DE DR++ +Q+WLP V++ + +
Sbjct: 154 ATPGRLVDHIDQTPGFSLLHLRFLVIDEADRMIDSMHQSWLPRVVEAAFPSDGAK----- 208
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F L+ + P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 209 ----DPFVLLQRRQPQAPTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLHQPWLFSTG 264
Query: 292 ETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
R Y P L + + C + KPL ++ L+ + + FT+S
Sbjct: 265 LARRDPGDSDADRDSGGKYAFPAGLSHHYVPCSLRTKPLAILHLILEKNFSRVLCFTNSR 324
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E++HRL L+ FG + E+S R LK F +GKIQ+L+S+DA RG+DV+
Sbjct: 325 ENSHRLFLLVQAFGG--VTAAEFSSRCGPGQRKAVLKQFEQGKIQLLISTDATARGIDVQ 382
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A
Sbjct: 383 GVQLVVNYDAPQYLRTYVHRVGRTARAGRTGQAFTLLLKVQERRFLRMLAEAGVPDMTRQ 442
Query: 457 SIPSSLIESLRPVYKSG 473
IPS L++ L P Y+
Sbjct: 443 DIPSELLQPLVPRYEEA 459
>gi|410047553|ref|XP_003954509.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Pan troglodytes]
Length = 497
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 254/496 (51%), Gaps = 87/496 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 48 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 107
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 108 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 137
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 138 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 175
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ +
Sbjct: 176 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCA 234
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F ++ C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 235 LFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 286
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 287 LAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 346
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 347 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 404
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 405 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 464
Query: 458 IPSSLIESLRPVYKSG 473
+ S L++ L P Y+
Sbjct: 465 LSSKLLQPLVPRYEEA 480
>gi|402888183|ref|XP_003907453.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Papio anubis]
Length = 656
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 255/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 207 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 266
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 267 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 296
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 297 ---------ATPLRVSLITGQKSLAKEQESLVQK-------------TADGYRCLADIVV 334
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 335 ATPGRLVDHIDQTPGFNLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSED 387
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 388 PADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 445
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 446 LAHRGLENTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 505
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R + LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 506 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRRILKQFEQGKIQLLISTDATARGIDVQG 563
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HRAGRTARAG+ G+ FTLL + + +RF ++L +A H
Sbjct: 564 VELVVNYDAPQYLRTYVHRAGRTARAGKTGQAFTLLLRVQERRFLQMLTEAGVPELRRHE 623
Query: 458 IPSSLIESLRPVYK 471
+ S L+++L P Y+
Sbjct: 624 LSSKLLQALVPRYE 637
>gi|348550777|ref|XP_003461207.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX51-like [Cavia porcellus]
Length = 677
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 255/495 (51%), Gaps = 88/495 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GIS+ FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 227 GISAYFPVQAAVIPAVLESSASGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 286
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 287 RVVCHIRALVVLPTKELAQQVS---------RVFNVYTD--------------------- 316
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ +A E L+++ + DI+V
Sbjct: 317 ---------ATPLRVALVTGQKPLAKEQESLVQK-------------TADGYRCLADIVV 354
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T+GF+L+ L +L+VDE DR++ +Q+WLP V+ F
Sbjct: 355 ATPGRLVDHIDQTQGFSLQQLRFLIVDEADRMIDSMHQSWLPRVMAAA-------FPCEG 407
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 290
P+ L+ R V P L K++ SATLTQ+P KL +L L+ P +T
Sbjct: 408 PTDPATL--LQRRRAPAVTAASTCCPQMPLQKLLFSATLTQNPEKLQRLGLYLPRLFSTR 465
Query: 291 --------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
E +Y P L + + C KPL ++ L+ + + + FT+S
Sbjct: 466 LAHRALEDDTAGGDPEGKYAFPSGLTHHYVPCSLNAKPLAIIHLVLGMSISRTLCFTNSR 525
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E++HRL L+ FG + + E+S R K LK F +GKIQ+L+S+DA RG+DV
Sbjct: 526 ENSHRLFLLVQAFGG--VSVAEFSACYGPGHRRKILKQFEQGKIQLLISTDATARGIDVP 583
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV V+NYD P Y++TY+HR GRTARAG++GR FTLL K + +RF ++L +A H
Sbjct: 584 GVELVINYDAPQYLRTYVHRVGRTARAGRMGRAFTLLLKVQERRFLRMLAEAGAPELVRH 643
Query: 457 SIPSSLIESLRPVYK 471
+PS L++ L P Y+
Sbjct: 644 EVPSKLLQPLVPRYE 658
>gi|154759257|ref|NP_778236.2| ATP-dependent RNA helicase DDX51 [Homo sapiens]
gi|229462978|sp|Q8N8A6.3|DDX51_HUMAN RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
Length = 666
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 253/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 217 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 276
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 277 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 306
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 307 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 344
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ F
Sbjct: 345 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSED 397
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 398 PADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 455
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 456 LAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 515
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 516 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 573
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 574 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 633
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 634 LSSKLLQPLVPRYE 647
>gi|426374738|ref|XP_004054220.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Gorilla gorilla
gorilla]
Length = 641
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 253/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 192 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 251
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 252 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 281
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 282 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 319
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 320 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSED 372
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 373 PADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 430
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 431 LAHRGLEDTDGDRDSGKYTFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCFTNSRE 490
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 491 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 548
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 549 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 608
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 609 LSSKLLQPLVPRYE 622
>gi|449281559|gb|EMC88606.1| ATP-dependent RNA helicase DDX51, partial [Columba livia]
Length = 489
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 262/497 (52%), Gaps = 95/497 (19%)
Query: 2 GISSLFPVQV----AVWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI S FPVQ A+ Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +
Sbjct: 47 GIQSFFPVQAEVIPAILQSASNGYLMGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLD 106
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 107 RVVCQVRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 136
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
GL V L GQ S A E L++ K G C S DI+V
Sbjct: 137 ---------GTGLKVVLITGQKSFAKEQEMLVQ--KKVTGYC-----------SLADIIV 174
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL DHIN T GF+L L +LVVDE DR++ + +Q L +++ EN +
Sbjct: 175 ATPGRLTDHINQTPGFSLTQLRFLVVDEADRMIDDMHQNCLNQIVKAA-FQVENGSGSNT 233
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
F + G + C YP+ L K++ SATLTQDP KL QL+L P T
Sbjct: 234 LFWRTKPGPITAASSC----------YPQIPLQKLLFSATLTQDPEKLQQLNLFQPRLFT 283
Query: 290 T--------GE-------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
+ GE T+Y LPE L + C+ KPL L+ + ++ + + FT+
Sbjct: 284 SVYSEKKSLGEGTETEQDTKYTLPEGLSQCYVPCDLNSKPLLLLHFMLTMKFSRVLCFTN 343
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E++HRL L+ FG R+ + E+S + R +T+K F +GKIQ+L+S+DA RG+D
Sbjct: 344 SREASHRLFLLVQAFG--RVTVAEFSSRLSPNERQRTMKEFEQGKIQLLISTDATARGID 401
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
++GVN V+NYD P +I+TYIHR GRTARAG++G F+L+ + + +RF ++L+ A
Sbjct: 402 IKGVNYVINYDAPQFIRTYIHRVGRTARAGEVGVAFSLVLRIQERRFLRMLKDAGIRDVK 461
Query: 455 IHSIPSSLIESLRPVYK 471
H + + SL+P+ +
Sbjct: 462 KHPVKGN---SLKPLVQ 475
>gi|299750023|ref|XP_001836493.2| ATP-dependent RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298408706|gb|EAU85306.2| ATP-dependent RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 692
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 263/526 (50%), Gaps = 102/526 (19%)
Query: 1 MGISSLFPVQVAVWQETI-----GPGLFER-----DLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ A+ + G GL+ DLC+++PTGSGKTL+Y LPIV+TL
Sbjct: 206 LGITELFAVQTAIVPHLLTGSSSGGGLYRPYDPPYDLCVSAPTGSGKTLAYVLPIVETLQ 265
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R V LRALVVLPTRDL + Q
Sbjct: 266 TRVVTRLRALVVLPTRDL---------------------------------------VGQ 286
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F AI+ GL +G A GQ S A E S+L+ YD L S VDIL
Sbjct: 287 VRETFEAISKGTGLKIGSASGQHSFAHEQSQLV----------YDRTSHLAGGSSKVDIL 336
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRLMDH+ T F+L+HL YLV+DE DRLL +++Q WL VL R+ + F D+
Sbjct: 337 ICTPGRLMDHLVGTPNFSLQHLRYLVIDEADRLLAQSFQDWLAQVLAAIRTPKKGTFLDS 396
Query: 231 STF--LPSAFG--SLKTIRRCGVERGFKDKPYPRLV------------KMVLSATLTQDP 274
+T +PS+ +++ I P P + K++ SATLT+DP
Sbjct: 397 TTVDNIPSSTSPYTIQPIPDGLAPNTLHQLPIPDIPTFLNEDRASSCQKLLFSATLTRDP 456
Query: 275 NKLAQLDLHHPLFL--TTGE-------------TRYKLPERLESYKLICESKLKPLYLVA 319
K+A LDL P ++ +G+ ++ +P+ L + ++ KPL +
Sbjct: 457 GKIAALDLRDPRYIIVQSGKDQSVEENVTQVVLEKFAVPDTLREHMIVVNPSKKPLIMFH 516
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-----------IKIKEYSGLQRQSVR 368
L+ S +VFT S EST RL L F E R I + YS S R
Sbjct: 517 LVYSHQVTNALVFTKSAESTTRLLRLFEFFEEARMAAGGEDTSSRIVARAYSSDSPPSER 576
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
L+ F+ KI +L+ SD ++RG+D+ VN+VV+YD P I+ Y+HR GRTARAG+ G
Sbjct: 577 KSILEDFKAQKIHILICSDLISRGIDISHVNHVVSYDAPVDIRKYVHRVGRTARAGREGD 636
Query: 429 CFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVYKSG 473
+TL+ + E FKK++++AD+ DS + + L P Y++
Sbjct: 637 AWTLVEEQEAHYFKKMMKEADHLDSVKRLRVAETATAPLEPFYEAA 682
>gi|410976432|ref|XP_003994624.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Felis catus]
Length = 538
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 256/517 (49%), Gaps = 101/517 (19%)
Query: 2 GISSLFPVQVAV----WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV + T L R DLC+++PTGSGKTL++ +P+VQ L
Sbjct: 57 GISSYFPVQAAVIPALLESTANGFLVARGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLC 116
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 117 RAVCQVRALVVLPTKELAQQVS---------KVFNVYTD--------------------- 146
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+ E L++R + D++V
Sbjct: 147 ---------ATPLRVALITGQKSLVKEQETLVQR-------------TADGFRCLADVVV 184
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR----- 226
ATPGRL+DHI+ T GF+L HL +LV+DE DR++ +Q+WLP V++ + +
Sbjct: 185 ATPGRLVDHIDQTPGFSLRHLRFLVIDEADRMIDSMHQSWLPRVVEAAFPSDSAKDPCAL 244
Query: 227 --------FSDASTFLPSAFGSLKTIRRCGVERGFKDK---------PYPRLVKMVLSAT 269
+ A LP + + C ++G + P L K++ SAT
Sbjct: 245 LQRRQLRATTAARPALPWRVPGGQVQQVCRPDQGRRPTARSPSSTCCPQMPLQKLLFSAT 304
Query: 270 LTQDPNKLAQLDLHHPLFLTTGETR---------------YKLPERLESYKLICESKLKP 314
LTQ+P KL QL LH P +TG R Y P L + C + KP
Sbjct: 305 LTQNPEKLQQLGLHQPRLFSTGLARGGPKDADADGDSGGKYTFPAGLSHCYVPCSLRTKP 364
Query: 315 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
L ++ L+ + + + FT+S E++HRL L+ FG + E+S R LK
Sbjct: 365 LVILHLILEMNFSRVLCFTNSRENSHRLFLLVQAFGG--VTAAEFSSRCGPGQRKAVLKQ 422
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
F +GKI++L+S+DA RG+D++GV VVNYD P Y++TY+HR GRTARAG+ GR FTLL
Sbjct: 423 FEQGKIRLLISTDATARGIDMQGVQLVVNYDAPQYLRTYVHRVGRTARAGRTGRAFTLLL 482
Query: 435 KDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 471
K + +RF ++L +A H IP L+ L P Y+
Sbjct: 483 KVQERRFLRMLAEAGAPELARHDIPGELLRPLVPRYE 519
>gi|395332279|gb|EJF64658.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 694
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 258/526 (49%), Gaps = 106/526 (20%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+GI+ LF VQ AV + P DLC+++PTGSGKTL+Y LPIV+ LS+
Sbjct: 206 LGITELFAVQTAVVPLLLSSPRSRALYRPYDPPEDLCVSAPTGSGKTLAYVLPIVEILSS 265
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V LRALVVLPTRDL LQV
Sbjct: 266 RVVTRLRALVVLPTRDLVLQV--------------------------------------- 286
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
++ F AIA GL +G A GQ S A E ++L+ E LQ S VDIL+
Sbjct: 287 RETFEAIAKGRGLKIGTATGQHSFAHEQAQLVAERNEE----------LQGGSSKVDILI 336
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q WL VL TR + S AS
Sbjct: 337 CTPGRLIDHLNGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQVLAATRPPRASDDSGAS 396
Query: 232 ---------------------TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 270
+ P+ L+ + V + +K P K++ SATL
Sbjct: 397 LSSELTTASINLAARGRPHPDSLSPTFLHLLRGVHY--VRTDYDEKKEPSCQKLLFSATL 454
Query: 271 TQDPNKLAQLDLHHPLFLTTGE-----------------TRYKLPERLESYKLICESKLK 313
T+DP K+A L L P ++ ++ +P L + ++CES +K
Sbjct: 455 TRDPAKIAALGLRQPKYVVVQSPKTSAASKEEGVLDFVMEKFTMPATLTEHMVVCESSVK 514
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL-------RIKIKEYSGLQRQS 366
PL L L+ + G +VFT S EST RL L F RI + YS
Sbjct: 515 PLMLFHLVHARGVTNALVFTKSAESTARLVRLFEFFESAHSDSQGRRIVARAYSSDLAPG 574
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L+ F+ +Q+LV SD ++RG+D+ V++VV+YD P + Y+HR GRTARAG+
Sbjct: 575 ERKSILEQFKSQDVQLLVCSDLISRGIDISHVSHVVSYDVPVDFRKYVHRVGRTARAGRA 634
Query: 427 GRCFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVYK 471
G +TL+ + E + FK +L++AD+ D + + +E L+P Y+
Sbjct: 635 GDAWTLVEEQEARYFKTMLKEADHLDKVKRVRVADADVEPLKPAYE 680
>gi|397487104|ref|XP_003814650.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Pan paniscus]
Length = 529
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 253/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GIS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 80 GISFYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 139
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 140 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 169
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 170 ---------ATSLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 207
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ +
Sbjct: 208 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCA 266
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F ++ C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 267 LFQRRQAQAVTAASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 318
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 319 LAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 378
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 379 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 436
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 437 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 496
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 497 LSSKLLQPLVPRYE 510
>gi|403292279|ref|XP_003945289.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Saimiri boliviensis boliviensis]
Length = 553
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 255/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 104 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 163
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 164 RVVCHVRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 193
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 194 ---------ATPLRVSLITGQKSLAKEQDSLVQK-------------TADGYRCLADIVV 231
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ F
Sbjct: 232 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSED 284
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 285 PAEPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 342
Query: 292 -------ET-------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
ET +Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 343 LAHRGPEETDGDRESGKYAFPAGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 402
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 403 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRKAILKQFEQGKIQLLISTDATARGIDVQG 460
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL + + +RF ++L ++ H
Sbjct: 461 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLRVQERRFLRMLAESGAPELQRHE 520
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 521 LSSKLLQPLVPKYE 534
>gi|21756727|dbj|BAC04942.1| unnamed protein product [Homo sapiens]
gi|326205429|dbj|BAJ84089.1| ATP-dependent RNA helicase DDX51 [Homo sapiens]
Length = 666
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 252/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 217 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 276
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 277 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 306
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+ E L+++ + DI+V
Sbjct: 307 ---------ATPLRVSLVTGQKSLVKEQESLVQK-------------TADGYRCLADIVV 344
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ F
Sbjct: 345 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSED 397
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 398 PADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 455
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 456 LAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 515
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 516 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQG 573
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 574 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 633
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 634 LSSKLLQPLVPRYE 647
>gi|51467974|ref|NP_001003864.1| ATP-dependent RNA helicase DDX51 [Danio rerio]
gi|82200454|sp|Q6DRI7.1|DDX51_DANRE RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
gi|49619011|gb|AAT68090.1| DEAD/H box 51 RNA helicase [Danio rerio]
Length = 652
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/490 (35%), Positives = 247/490 (50%), Gaps = 84/490 (17%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSN 51
GI S FPVQ V E++G GL RD+C+++PTGSGKTL++ +P+VQ LS
Sbjct: 208 GIQSFFPVQAEVIPAILESVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSK 267
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R VR +RAL VLPT++LA QV+
Sbjct: 268 RVVRQVRALAVLPTKELAQQVS-------------------------------------- 289
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+VF+A L V + GQ S A E + L ++ G+ + S DI+V
Sbjct: 290 -NVFSAYTEGSSLKVVMITGQKSFAAEQTAL---SEIRGGVSH----------SMADIVV 335
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHIN F+L+HL +L++DE DR++ +Q+WL V + S + S
Sbjct: 336 ATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGE--THTS 393
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 290
F + G + P L K++ SATLTQ+P KL LDLH P LF +T
Sbjct: 394 VFRRTVPGPITAASLS--------PPQIPLQKLLFSATLTQNPEKLQLLDLHQPRLFSST 445
Query: 291 ---------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 341
+ + P+ L Y + C KPL ++ L L + FT+S E HR
Sbjct: 446 HSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSPALCFTNSREGAHR 505
Query: 342 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 401
L L+ FG +++ E+S R KTLK F +GKI +L+S+DA RG+D+ GV V
Sbjct: 506 LYLLVKLFGG--VEVAEFSSKLSPGERQKTLKDFEKGKIPLLISTDAAARGIDINGVKCV 563
Query: 402 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSS 461
+NYD P YI+TYIHR GRTARAG+ G FT L K + KRF K++ A + +
Sbjct: 564 INYDAPQYIRTYIHRVGRTARAGKAGLAFTFLLKVQEKRFLKMVSDAGSPGIQKQHVHPE 623
Query: 462 LIESLRPVYK 471
++S+ Y+
Sbjct: 624 ALKSMESRYE 633
>gi|296213300|ref|XP_002753212.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Callithrix jacchus]
Length = 797
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 254/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 218 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 277
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 278 RVVCHVRALVVLPTKELAQQVS---------RVFNIYTD--------------------- 307
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 308 ---------ATPLRVSLVTGQKSVAKEQESLVQK-------------TADGYRCLADIVV 345
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ F
Sbjct: 346 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSED 398
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 399 PADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 456
Query: 292 -------ET-------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
ET +Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 457 LAHRGPEETGGDRESGKYAFPVGLTHHYVPCSLSSKPLVILHLVLEMGFSRVLCFTNSRE 516
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+G
Sbjct: 517 NSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRAILKQFEQGKIQLLISTDATARGIDVQG 574
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A + H
Sbjct: 575 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLAEAGAPALQRHE 634
Query: 458 IPSSLIESLRPVYK 471
+P L+ L Y+
Sbjct: 635 LPGKLLRPLVSRYE 648
>gi|345314845|ref|XP_001512662.2| PREDICTED: ATP-dependent RNA helicase DDX51, partial
[Ornithorhynchus anatinus]
Length = 652
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 252/489 (51%), Gaps = 81/489 (16%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + RD+C+++PTGSGKTLS+ +P+VQ LS
Sbjct: 217 GISSYFPVQAAVIPVVLESATHGFLVGRGGYRPRDICVSAPTGSGKTLSFVIPVVQVLSE 276
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+
Sbjct: 277 RAVCHVRALVVLPTKELAQQVSK------------------------------------- 299
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF L V L GQ +A E L++ E Y +S DI+V
Sbjct: 300 --VFHTYTEQTALRVALITGQKPLAKEQELLVQ----ETDTGY---------RSLADIVV 344
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L L +LV+DE DR++ Q+WLP V+
Sbjct: 345 ATPGRLVDHIDQTPGFSLRQLRFLVIDEADRMIDSMQQSWLPRVMAAV-FGGTGSGGPGE 403
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 290
+A G + C +P L K++ SATLT++P KL QL L+ P LF TT
Sbjct: 404 LLQRTAPGVITAASSC--------RPQMPLQKLLFSATLTRNPEKLQQLGLYQPRLFSTT 455
Query: 291 G-------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 343
G + +Y P L Y + C KP+ ++ LL + + FT+S E++HRL
Sbjct: 456 GTREGPAGDGKYTFPAGLSHYYVPCSLSSKPMLVLHLLHQEDFPRVLCFTNSRENSHRLF 515
Query: 344 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 403
L+ FG +K+ E+S R LK F +GKIQ+L+S+DA RG+DVEGV V+N
Sbjct: 516 LLIQAFGG--VKVAEFSSRFGPGQRKLILKQFEQGKIQLLISTDATARGIDVEGVKLVIN 573
Query: 404 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
YD P YI++Y+HR GRTARAG+ G +T L K + ++F ++L++A + + I L+
Sbjct: 574 YDAPHYIRSYVHRVGRTARAGRTGLAYTFLLKVQEQKFLRMLREAGAPALQPYPIRRELL 633
Query: 464 ESLRPVYKS 472
E L P Y++
Sbjct: 634 EPLVPQYQA 642
>gi|441630929|ref|XP_004093170.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Nomascus leucogenys]
Length = 684
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 253/494 (51%), Gaps = 87/494 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G + DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 127 GISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLS 186
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 187 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 216
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 217 ---------ATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVV 254
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ +
Sbjct: 255 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDSADPCA 313
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
F ++ C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 314 LFQRRQAQAVTAASTC--------CPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTG 365
Query: 292 --------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
+Y P L + + C KPL ++ L+ +G + + FT+S E
Sbjct: 366 LAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRE 425
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
++HRL L+ FG + + E+S R LK +GKIQ+L+S+DA RG+DV+G
Sbjct: 426 NSHRLFLLVQAFGG--VDVAEFSSRYGPXQRRMILKQXEQGKIQLLISTDATARGIDVQG 483
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
V VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H
Sbjct: 484 VELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHE 543
Query: 458 IPSSLIESLRPVYK 471
+ S L++ L P Y+
Sbjct: 544 LSSKLLQPLVPRYE 557
>gi|301117032|ref|XP_002906244.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107593|gb|EEY65645.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 564
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 257/503 (51%), Gaps = 86/503 (17%)
Query: 1 MGISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
+ I S FPVQ VA+ + D+CI++PTGSGKTL+Y +PIVQ L R V +RA
Sbjct: 40 LNIRSFFPVQAVAIPKILASDSDRVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRA 99
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
L+VLP+RDLA+QV H I + VQ
Sbjct: 100 LIVLPSRDLAVQV------------------HQIVQQFVQ-------------------- 121
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L GLA+GQS+ A E + L+ I +S VDILVATPGRL+D
Sbjct: 122 -GTPLKCGLAIGQSNFAAEQNALVGATSGNKVIATTDGG-----RSLVDILVATPGRLVD 175
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ T GFTL+HL ++VDE DRLL ++YQ W+ V + E D T G
Sbjct: 176 HLEQTPGFTLQHLQIMIVDEADRLLNQSYQDWISKVYASVFNGQEVD-EDGLTL-----G 229
Query: 240 SLKTIRRC-GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH-----------PL- 286
T RR + R P L +++LSATLT++P KLA + + + PL
Sbjct: 230 VGVTCRRQDSINRRRIRTP---LTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLA 286
Query: 287 ------------------FLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
TG + Y P L+ Y + C++ KPL L+ LL
Sbjct: 287 DNAKLGNAGDSDDEDEDGDEATGSKKMYSTPTNLDEYWIECDTGSKPLVLLELLSEFAGS 346
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
IVFT+SV STHRL LL + +I+E+S Q RS + + G+++ +V SD
Sbjct: 347 LSIVFTASVNSTHRLARLLQLYSTHPERIREFSSSLSQKQRSSLVADCKAGRVETVVCSD 406
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
AM RGMD+E V NVVNYD P++IKTYIHR GRTARAG+ GRC TL+ ++K ++L+K
Sbjct: 407 AMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKLGQMKSMMRMLKK 466
Query: 448 ADNDSCPIHSIPSSLIESLRPVY 470
ADN+ +++ +++L P Y
Sbjct: 467 ADNNKLKPYALQQEHMKTLVPRY 489
>gi|440909766|gb|ELR59643.1| ATP-dependent RNA helicase DDX51, partial [Bos grunniens mutus]
Length = 542
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 251/496 (50%), Gaps = 92/496 (18%)
Query: 2 GISSLFPVQVAV--WQETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNR 52
GISS FP A+ W G DLC+++PTGSGKTL++ +P+VQ L +R
Sbjct: 94 GISSYFPGAPALGRWTGDGANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHR 153
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
AV +RALVVLPT++LA QV+ +F + D
Sbjct: 154 AVCQVRALVVLPTKELAQQVS---------KVFNVYTD---------------------- 182
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
A L V L GQ S+A E L+++ + DI+VA
Sbjct: 183 --------ATPLRVALITGQKSLAKEQESLVQK-------------TADGFRCLADIMVA 221
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DHI+ T GF+L+HL +L++DE DR++ +Q+WLP V+ R +
Sbjct: 222 TPGRLVDHIDQTPGFSLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR-DPCAV 280
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
F + L C P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 281 FQRTQPRVLTAASMCC--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGS 332
Query: 293 T-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 335
+Y P L+ + + C + KPL ++ L+ + + + FT+S
Sbjct: 333 AHRGPSDPDIDVDEDSGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVLCFTNS 392
Query: 336 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
E++HRL + FG + + E+S R LK F +GKIQ+L+S+DAM RG+DV
Sbjct: 393 RENSHRL---VQAFGG--VTVAEFSSRYGPGQRKGILKQFEQGKIQLLISTDAMARGIDV 447
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 455
+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L++
Sbjct: 448 QGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFTLLLKVQERRFLRMLEEGGVPGLER 507
Query: 456 HSIPSSLIESLRPVYK 471
H PS L++ L P Y+
Sbjct: 508 HDTPSELLQPLVPQYE 523
>gi|326929902|ref|XP_003211092.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Meleagris
gallopavo]
Length = 582
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/502 (35%), Positives = 259/502 (51%), Gaps = 96/502 (19%)
Query: 2 GISSLFPVQV----AVWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI S FPVQ AV Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +
Sbjct: 130 GIESFFPVQAEVIPAVLQSASNGYLMGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLD 189
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV +F + D
Sbjct: 190 RVVCQVRALVVLPTKELAQQVG---------KVFNIYTD--------------------- 219
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
GL V L GQ S A E L++ K G C S DI+V
Sbjct: 220 ---------GTGLKVVLITGQKSFAKEQEMLVQ--KKVTGYC-----------SLADIIV 257
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT-RSDNENRFSDA 230
ATPGRL DHI+ T GF+L L +L++DE DR++ + +Q WL V++ +++NE+
Sbjct: 258 ATPGRLADHISKTPGFSLTQLRFLIIDEADRMIDDMHQNWLNQVVKAAFQAENED--GSN 315
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+ F + G + C YP+ L K++ SATLTQDP KL QL L P
Sbjct: 316 TLFQRTKPGPVTAAGCC----------YPQIPLQKLLFSATLTQDPEKLQQLGLFQPCLF 365
Query: 289 TT-----------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 331
T+ E +Y LPE L + C+ KPL L+ + + + +
Sbjct: 366 TSVYSEKKPLRDGTETEQDSEEKYTLPEELSQSYVPCDLNSKPLLLLHFMLTKKFTRVLC 425
Query: 332 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 391
FT+S E++HRL L+ FG I + E+S + R +TLK F +GKIQ+L+S+DA R
Sbjct: 426 FTNSREASHRLFLLVQAFG--GITVAEFSSRLPPNERKRTLKEFEQGKIQLLISTDATAR 483
Query: 392 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 451
G+D++GVN V+NYD P +I+TYIHR GRTARAG+ G F+++ + + +RF ++L+ A
Sbjct: 484 GIDIKGVNCVINYDTPQFIRTYIHRVGRTARAGKAGLAFSMVLRIQERRFLRMLKDAGIP 543
Query: 452 SCPIHSIPSSLIESLRPVYKSG 473
H + L++ L Y+
Sbjct: 544 DIKQHLVKGKLLKPLVQQYEEA 565
>gi|351698593|gb|EHB01512.1| ATP-dependent RNA helicase DDX51, partial [Heterocephalus glaber]
Length = 536
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 252/502 (50%), Gaps = 100/502 (19%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 90 GISSYFPVQAAVIPALLENAASGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 149
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALV+LPT++LA QV+ +F + D
Sbjct: 150 RVVCHVRALVMLPTKELAQQVS---------KVFNIYTD--------------------- 179
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ +A E L+++ + DI+V
Sbjct: 180 ---------ATPLRVALVTGQKPLATEQESLVQK-------------TADGFRCLADIVV 217
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHIN T GF+L+ L +LVVDE DR++ +Q+WLP V+ +
Sbjct: 218 ATPGRLVDHINQTPGFSLQQLRFLVVDEADRMIDSMHQSWLPRVM--------------A 263
Query: 232 TFLPSAFGS-----LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 286
LPS + L+ R V P L K++ SATLTQ+P KL QL L+ P
Sbjct: 264 AALPSKGPADPCALLQRWRPQAVTAASACCPQMPLQKLLFSATLTQNPEKLQQLGLYQPR 323
Query: 287 FLTT-----------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 329
+T E +Y P L + + C KPL ++ L+ +
Sbjct: 324 LFSTRLAHRVPKDEGTEVDRDPEGKYTFPAGLTHHYVPCSLSSKPLAIMHLVVGKNFSRA 383
Query: 330 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
+ FT+S E++HRL LL FG + + E+S R K LK F +GKIQ+L+S+DA
Sbjct: 384 LCFTNSRENSHRLFLLLQAFGG--VSVAEFSSRYGPGHRRKVLKQFEQGKIQLLISTDAT 441
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + + F ++L +
Sbjct: 442 ARGIDVLGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERTFLRMLAEGG 501
Query: 450 NDSCPIHSIPSSLIESLRPVYK 471
H IPS L++ L P Y+
Sbjct: 502 APELARHEIPSKLLQPLVPRYE 523
>gi|417411466|gb|JAA52168.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 535
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 254/498 (51%), Gaps = 92/498 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G ++ RDLC+++PTGSGKTL++ LP+VQ L
Sbjct: 85 GISSYFPVQAAVIPAVLESAANGFLVGRGGYQPRDLCVSAPTGSGKTLAFVLPVVQALLW 144
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
RAV +RALVVLPT++LA QV+ +F + D
Sbjct: 145 RAVCHVRALVVLPTKELAQQVS---------RVFNVYTD--------------------- 174
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + DI+V
Sbjct: 175 ---------ATPLRVALVTGQKSLAKEQETLVQK-------------TADGFRCLADIVV 212
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ--LTRSDNENRFSD 229
ATPGRL+DHI+ T GF+L L +LV+DE DR++ +Q+WLP V+ R ++ +
Sbjct: 213 ATPGRLVDHIDQTPGFSLRQLRFLVIDEADRMMDSMHQSWLPRVVAAAFPREGAQDPCAL 272
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
P A + T C P L K++ SATLTQ+P KL QL L+ P +
Sbjct: 273 LQRRQPQAVTAAST---C--------SPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFS 321
Query: 290 TGETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
T R Y P L + + C + KPL ++ L+ L + + FT+
Sbjct: 322 TQPARGGPGDADADVGSGAKYTFPSGLSHHYVPCSLQAKPLVILHLILHLSFSRVLCFTN 381
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
S E+ HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+D
Sbjct: 382 SRENAHRLFLLVQAFGG--VAVAEFSSRYGPGWRKMILKQFEQGKIQLLISTDATARGID 439
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
V GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F ++L +A
Sbjct: 440 VRGVQLVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLRMLTEAGAPELQ 499
Query: 455 IHSIPSSLIESLRPVYKS 472
H P+ L++ L P Y++
Sbjct: 500 RHDAPTELLQPLVPRYEA 517
>gi|392564142|gb|EIW57320.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 682
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 264/524 (50%), Gaps = 102/524 (19%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+GI+ LF VQ AV Q P DLC+++PTGSGKTL+Y LPIV+ LS
Sbjct: 198 LGIAELFAVQTAVVPLLLSSTRAQSLYRPYDPPEDLCVSAPTGSGKTLAYVLPIVEVLSA 257
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V LRAL+VLPTRDL +QV
Sbjct: 258 RIVTRLRALIVLPTRDLVVQV--------------------------------------- 278
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
++ F A+A GL +G A GQ S A E S+L+ E G LQ S VD+L+
Sbjct: 279 RETFEAVAKGRGLKIGTATGQHSFAHEQSQLV----AERG------SDLQGGSSKVDVLI 328
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD--NENRFSD 229
TPGRLMDHI T F+L+HL +LV+DE DRLL +++Q WL VL +TR +++ S+
Sbjct: 329 CTPGRLMDHITGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQVLAVTRPPRPSDDTRSE 388
Query: 230 AST------------FLPSAFGSLKTIRRCGVER-GFKDKPYPRLVKMVLSATLTQDPNK 276
AST L AF L +R R ++ P K++ SATLT+DP K
Sbjct: 389 ASTPPSHTTPRPHPDALAPAF--LHLLRGAPYTRTDIDERKEPSCQKLLFSATLTRDPAK 446
Query: 277 LAQLDLHHPLFL---------TTGET--------RYKLPERLESYKLICESKLKPLYLVA 319
+A L L P ++ T E ++ +P L + L+CES KPL L
Sbjct: 447 IAALGLRAPRYIVVQGRKSAAATKEEGVLDFVMEKFTMPATLTEHMLVCESAAKPLMLFH 506
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHF-GELR--------IKIKEYSGLQRQSVRSK 370
++ + G +VFT S ES RL L F G LR + + YS R
Sbjct: 507 MVHARGVTNALVFTKSAESATRLVRLFEFFEGALRAADASKKPVVARAYSSDLAPGERKA 566
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L+ FR +I +L+ SD ++RG+D+ V++VV+YD P + Y+HR GRTARAG+ G +
Sbjct: 567 ILEQFRNQEINILICSDLVSRGIDISHVSHVVSYDVPVDFRKYVHRVGRTARAGREGDAW 626
Query: 431 TLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVYKSG 473
TL+ + E + FK +L++AD+ + + S + SL+P Y++
Sbjct: 627 TLVEEQEARYFKGMLKEADHLEKVKRLRVSDSDVASLKPAYETA 670
>gi|395513523|ref|XP_003760973.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Sarcophilus harrisii]
Length = 668
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 257/499 (51%), Gaps = 95/499 (19%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI S FPVQ AV +G G ++ D+C+++PTGSGKTLS+ +P++Q L
Sbjct: 219 GILSYFPVQAAVIPALLESASHGFLVGKGGYQPSDICVSAPTGSGKTLSFVIPVIQVLLE 278
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + AD
Sbjct: 279 RVVCHIRALVVLPTKELAQQVS---------KVFNVYAD--------------------- 308
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
GL V GQ S+A E L++ K ++G S DI+V
Sbjct: 309 ---------GTGLRVAQITGQKSLAKEQEILVQ--KTDSG-----------YHSLADIVV 346
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L L +L++DE DR++ +Q+WLP V++ ++
Sbjct: 347 ATPGRLVDHIDQTPGFSLRQLRFLIIDEADRMIDSMHQSWLPRVVKAVFHGDD------- 399
Query: 232 TFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
A GS RR + +P L K++ SATLT++P KL +L L+ P
Sbjct: 400 -----APGSSPLFRRVEPRAITAASTSQPQMPLQKLLFSATLTRNPEKLQELGLYQPRLF 454
Query: 289 TTG----------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
+TG E +Y P L + + C KPL ++ L+++L + + F
Sbjct: 455 STGLESQESTVQPGIEQDVEGKYAFPAGLSHFYVPCSLNSKPLVILHLMRNLKFSRVLCF 514
Query: 333 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
T+S E +HRL L+ FG I + E+S R LK F +GKIQ+L+S+DA RG
Sbjct: 515 TNSREHSHRLFLLVKAFGG--IPVAEFSSRFGPGQRKMILKQFEQGKIQLLISTDATARG 572
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDS 452
+DV+GV V+NYD P YI+TY+HR GRTARAG G FTLL K + ++F ++L++A
Sbjct: 573 IDVKGVKLVINYDAPQYIRTYVHRVGRTARAGHTGLAFTLLLKVQEQKFLQMLREARAPE 632
Query: 453 CPIHSIPSSLIESLRPVYK 471
H + + ++SL P Y+
Sbjct: 633 LGKHLVRNEHLKSLVPQYE 651
>gi|118098682|ref|XP_415229.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Gallus gallus]
Length = 764
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 255/499 (51%), Gaps = 94/499 (18%)
Query: 2 GISSLFPVQV----AVWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI S FPVQ AV Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +
Sbjct: 312 GIESFFPVQAEVIPAVLQSASNGYLVGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLD 371
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 372 RVVCQVRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 401
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
GL V L GQ S A E L++ K G C S DI+V
Sbjct: 402 ---------GTGLKVVLITGQKSFAKEQEMLVQ--KKVTGYC-----------SLADIIV 439
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL DHI+ T GF+L L +L+VDE DR++ + +Q WL V++ EN
Sbjct: 440 ATPGRLADHISKTPGFSLTQLRFLIVDEADRMIDDMHQNWLNQVVKAA-FQAENEAGSNM 498
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
F + G + C YP+ L K++ SATLTQDP KL QL L P T
Sbjct: 499 LFQRTKPGPVTAASCC----------YPQIPLQKLLFSATLTQDPEKLQQLGLFQPRLFT 548
Query: 290 T-----------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
+ E +Y LPE L + C+ KPL L+ + + + + F
Sbjct: 549 SVYSEKKTLRDGTETKEDCEEKYTLPEGLSQSYVPCDLNSKPLLLLHFMLTKKFTRVLCF 608
Query: 333 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
T+S E++HRL L+ FG I + E+S + R +T+K F +GKIQ+L+S+DA RG
Sbjct: 609 TNSREASHRLFLLVQAFGG--ITVAEFSSRLPPNERQRTMKEFEQGKIQLLISTDATARG 666
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDS 452
+D++GVN V+NYD P +I+TYIHR GRTARAG+ G F+++ + + +RF ++L+ A
Sbjct: 667 IDIKGVNCVINYDTPQFIRTYIHRVGRTARAGKAGLAFSMVLRIQERRFLRMLKDAGIPD 726
Query: 453 CPIHSIPSSLIESLRPVYK 471
H + L++ L Y+
Sbjct: 727 IKQHLVKGKLLKPLVQQYE 745
>gi|354479142|ref|XP_003501772.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Cricetulus
griseus]
Length = 552
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 253/495 (51%), Gaps = 88/495 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 102 GISSYFPVQAAVIPALLESTDSGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 161
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 162 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 191
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + + DILV
Sbjct: 192 ---------ATPLRVALVTGQKSLAKEQESLVQK-------------TVDGYRCLADILV 229
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E +
Sbjct: 230 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FHSEGPSGSCA 288
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 290
+ ++ T C F P L K++ SATLTQ+P KL +L L+ P +T
Sbjct: 289 LLQRTQPQAVTTASTC-----FPQMP---LQKLLFSATLTQNPEKLQRLGLYQPRLFSTR 340
Query: 291 --------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
+Y P L + + C KPL ++ L+ + + + FT+S
Sbjct: 341 LGHKGPKDTVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLGMNFSRALCFTNSR 400
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E +HRL L FG + + E+S R K LK F +GKIQ+L+S+DA RG+DV+
Sbjct: 401 EHSHRLFLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQ 458
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H
Sbjct: 459 GVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELACH 518
Query: 457 SIPSSLIESLRPVYK 471
IP L++ L Y+
Sbjct: 519 EIPRELLQPLVSRYE 533
>gi|344246330|gb|EGW02434.1| ATP-dependent RNA helicase DDX51 [Cricetulus griseus]
Length = 605
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 253/495 (51%), Gaps = 88/495 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 155 GISSYFPVQAAVIPALLESTDSGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 214
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 215 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 244
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
A L V L GQ S+A E L+++ + + DILV
Sbjct: 245 ---------ATPLRVALVTGQKSLAKEQESLVQK-------------TVDGYRCLADILV 282
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E +
Sbjct: 283 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FHSEGPSGSCA 341
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 290
+ ++ T C F P L K++ SATLTQ+P KL +L L+ P +T
Sbjct: 342 LLQRTQPQAVTTASTC-----FPQMP---LQKLLFSATLTQNPEKLQRLGLYQPRLFSTR 393
Query: 291 --------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
+Y P L + + C KPL ++ L+ + + + FT+S
Sbjct: 394 LGHKGPKDTVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLGMNFSRALCFTNSR 453
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E +HRL L FG + + E+S R K LK F +GKIQ+L+S+DA RG+DV+
Sbjct: 454 EHSHRLFLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQ 511
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H
Sbjct: 512 GVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELACH 571
Query: 457 SIPSSLIESLRPVYK 471
IP L++ L Y+
Sbjct: 572 EIPRELLQPLVSRYE 586
>gi|148688064|gb|EDL20011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Mus musculus]
Length = 639
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 253/500 (50%), Gaps = 94/500 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI+S FPVQ AV IG G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 189 GITSYFPVQAAVIPALLESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 248
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 249 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 278
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
L V L GQ S+A E L+++ + DI+V
Sbjct: 279 ---------TTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCLADIVV 316
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ A+
Sbjct: 317 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AA 364
Query: 232 TFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+ GS ++R V P L K++ SATLTQDP KL +L L+ P
Sbjct: 365 FYSEGPTGSCALLQRTQPQAVTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLF 424
Query: 289 TT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
+T +Y P L + + C KPL ++ L+ + + + FT
Sbjct: 425 STRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFT 484
Query: 334 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
+S E++HRL L FG + + E+S R K LK F +GKIQ+L+S+DA RG+
Sbjct: 485 NSRENSHRLYLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGI 542
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 453
DV+GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A
Sbjct: 543 DVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPEL 602
Query: 454 PIHSIPSSLIESLRPVYKSG 473
H IP L++ L Y++
Sbjct: 603 THHEIPRKLLQPLVARYETA 622
>gi|393245833|gb|EJD53343.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 522
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 250/502 (49%), Gaps = 94/502 (18%)
Query: 1 MGISSLFPVQVAVWQETIG--------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+GI LF +Q A+ + P RD+C ++PTGSGKTL+Y LP+ + L+ R
Sbjct: 71 LGIRELFAIQTALVPHLLAKPTRALYLPYSPPRDVCASAPTGSGKTLAYVLPLAELLAMR 130
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
AV LRAL+VLPTRDL + QV+
Sbjct: 131 AVPRLRALIVLPTRDL---------------------------------------VAQVR 151
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+VF A+A GL VG G +S A E ++L+ + +S VD+LV
Sbjct: 152 EVFEAVAKGAGLRVGSVTGAASFAHEKAQLVDK----------------RGESKVDVLVC 195
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL-----TRSDNENRF 227
TPGRL+DH++ T GFTL+HL +LV+DE DRLL +++Q WL VL T S
Sbjct: 196 TPGRLIDHLDGTEGFTLQHLRFLVIDEADRLLTQSFQDWLARVLSAITPPSTPSSTLPSR 255
Query: 228 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
A +FLP F S + R F+ P P KM+LSATLT+DP +LA L LHHP +
Sbjct: 256 PVAPSFLPHPFASAGSNLRPD----FEPPPRPSCQKMLLSATLTRDPGRLAALGLHHPQY 311
Query: 288 LTTG--------ETRYKLPERLESYKLICESKLKPLYLV------ALLQSLGEEK--CIV 331
E +PE L+ + + KPL L LL + GEEK +V
Sbjct: 312 FVVSSSGGAAAPEEFGAVPEGLDERFCVIDPAEKPLVLAWILREHVLLAAGGEEKKQVLV 371
Query: 332 FTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
F SVE+ RL LL ++ + YS +S+ L+ FR G + VLV SD ++
Sbjct: 372 FCKSVEAATRLGVLLAAMLADVGKSVASYSSDAPRSL----LERFRTGAVDVLVCSDLVS 427
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD- 449
RG+DV V V+NYD P + Y+HR GRTARAG+ G +T++ E + FK+LL A
Sbjct: 428 RGLDVPSVAAVLNYDAPVDARKYVHRVGRTARAGRRGDAWTMVEGQEARHFKELLAAAGR 487
Query: 450 NDSCPIHSIPSSLIESLRPVYK 471
D + ++E LRP Y+
Sbjct: 488 TDRVKKVRVAEKVLEPLRPAYE 509
>gi|409048731|gb|EKM58209.1| hypothetical protein PHACADRAFT_171465 [Phanerochaete carnosa
HHB-10118-sp]
Length = 681
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 248/497 (49%), Gaps = 96/497 (19%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER--------DLCINSPTGSGKTLSYALPIVQTLSNR 52
+GI+ LF VQ AV + R D+C+++PTGSGKTL+Y LPIV+ LS+R
Sbjct: 200 LGITELFAVQTAVIPFLMSDQKQRRLYLHDPPHDICVSAPTGSGKTLAYVLPIVELLSSR 259
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
+ LRAL+VLPTRDL + QV+
Sbjct: 260 VITRLRALIVLPTRDL---------------------------------------VTQVR 280
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+ F A+A L +G A GQ S A E S+L+ L LQ S +DIL+
Sbjct: 281 ETFEALAKGRSLKIGTATGQHSFAHEQSQLVADRTLR----------LQGGSSKIDILIC 330
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DH+N T F+L+HL +LV+DE D+LL +++Q WL VL TR D +
Sbjct: 331 TPGRLIDHLNGTPNFSLQHLRFLVIDEADKLLAQSFQDWLARVLSATRPSEIPTSPDLVS 390
Query: 233 FLPSAFGSLKTIRRCG------------VERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
+ S+ S+ T V F + K++ SATLT+DP+K+A L
Sbjct: 391 GVASSTDSIPTPDGLAPAFLHIFHGIPHVRTDFDEPKETSCQKLLFSATLTRDPSKIAAL 450
Query: 281 DLHHP-LFLTTGETR----------------YKLPERLESYKLICESKLKPLYLVALLQS 323
+L P F+ G +R + +P L + ++CES KPL L L+ +
Sbjct: 451 NLRDPKYFVVQGSSREIATQQEGVLDLVMEKFNMPATLLEHMIVCESSQKPLVLFHLVHT 510
Query: 324 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE----------YSGLQRQSVRSKTLK 373
G + +VFT S EST RL L F RI E YS S R + L
Sbjct: 511 HGVKNALVFTKSAESTARLVKLFEFFELSRISSTEQQGSAIVLSAYSSDLAPSARKEILD 570
Query: 374 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
F+ + +LV SD ++RG+D+ V++VV+YD P ++ Y+HR GRTARAG+ G +TL+
Sbjct: 571 KFKNQETHILVCSDLISRGIDISHVSHVVSYDAPVDMRKYVHRVGRTARAGRTGDAWTLI 630
Query: 434 HKDEVKRFKKLLQKADN 450
+ E + FK +L++A++
Sbjct: 631 EEQEARHFKNMLKEANH 647
>gi|224072122|ref|XP_002196880.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Taeniopygia
guttata]
Length = 707
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 253/493 (51%), Gaps = 91/493 (18%)
Query: 2 GISSLFPVQV----AVWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI S FPVQ A+ Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +
Sbjct: 257 GIDSFFPVQAEVIPAILQSAANGYLLGRGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLD 316
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 317 RVVCHVRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 346
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
GL V L GQ S A E L++ K G C S DI+V
Sbjct: 347 ---------GTGLKVVLITGQKSFAKEQEMLVE--KKVTGYC-----------SLADIVV 384
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL DHIN T GF+L L +LVVDE DR++ + +Q L +++ EN
Sbjct: 385 ATPGRLTDHINQTPGFSLTQLRFLVVDEADRMIDDMHQNCLNQIVKAA-FQGENSSGSNM 443
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 290
F + G L C P L K++ SATLTQDP KL QLDL P T+
Sbjct: 444 LFQRTKPGPLTAASSCS--------PQIPLQKLLFSATLTQDPEKLQQLDLFQPRLFTSV 495
Query: 291 --------GET------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
ET +Y LPE L + C+ KPL L+ + + + + FT+S
Sbjct: 496 YSEKNRDGTETEQDTTNKYTLPEGLSQCYVPCDLNSKPLLLLYFMLKMKFTRVLCFTNSR 555
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E++HRL L+ FG I + E+S + R +T+K F +GKIQ+L+S+DA RG+DV+
Sbjct: 556 EASHRLFLLVQAFGG--ITVAEFSSRLTPNERKRTMKEFEQGKIQLLISTDATARGIDVK 613
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
VN V+NYD P +I+TY+HR GRTARAG+ G F+L+ + + +RF ++L+ A H
Sbjct: 614 RVNYVINYDAPQFIRTYVHRVGRTARAGEAGVAFSLVLRIQERRFLRMLRDAGIRDIKKH 673
Query: 457 SIPSSLIESLRPV 469
+ + SL+P+
Sbjct: 674 PVKGN---SLKPL 683
>gi|40538825|ref|NP_081432.2| ATP-dependent RNA helicase DDX51 [Mus musculus]
gi|81892367|sp|Q6P9R1.1|DDX51_MOUSE RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
gi|38614333|gb|AAH60646.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Mus musculus]
Length = 639
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 253/500 (50%), Gaps = 94/500 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI+S FPVQ AV IG G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 189 GITSYFPVQAAVIPALLESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 248
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 249 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 278
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
L V L GQ S+A E L+++ + DI+V
Sbjct: 279 ---------TTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCLADIVV 316
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ A+
Sbjct: 317 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AA 364
Query: 232 TFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+ GS ++R + P L K++ SATLTQDP KL +L L+ P
Sbjct: 365 FYSEGPTGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLF 424
Query: 289 TT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
+T +Y P L + + C KPL ++ L+ + + + FT
Sbjct: 425 STRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFT 484
Query: 334 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
+S E++HRL L FG + + E+S R K LK F +GKIQ+L+S+DA RG+
Sbjct: 485 NSRENSHRLYLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGI 542
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 453
DV+GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A
Sbjct: 543 DVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPEL 602
Query: 454 PIHSIPSSLIESLRPVYKSG 473
H IP L++ L Y++
Sbjct: 603 THHEIPRKLLQPLVARYETA 622
>gi|74220751|dbj|BAE31347.1| unnamed protein product [Mus musculus]
Length = 639
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 253/500 (50%), Gaps = 94/500 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI+S FPVQ AV IG G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 189 GITSYFPVQAAVIPALLESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 248
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 249 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 278
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
L V L GQ S+A E L+++ + DI+V
Sbjct: 279 ---------TTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCLADIVV 316
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ A+
Sbjct: 317 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AA 364
Query: 232 TFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+ GS ++R + P L K++ SATLTQDP KL +L L+ P
Sbjct: 365 FYSEGPTGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLF 424
Query: 289 TT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
+T +Y P L + + C KPL ++ L+ + + + FT
Sbjct: 425 STRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFT 484
Query: 334 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
+S E++HRL L FG + + E+S R K LK F +GKIQ+L+S+DA RG+
Sbjct: 485 NSRENSHRLYLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGI 542
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 453
DV+GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A
Sbjct: 543 DVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPEL 602
Query: 454 PIHSIPSSLIESLRPVYKSG 473
H IP L++ L Y++
Sbjct: 603 THHEIPRKLLQPLVARYETA 622
>gi|343426780|emb|CBQ70308.1| related to DBP6-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 852
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/498 (34%), Positives = 253/498 (50%), Gaps = 97/498 (19%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+G+S F VQV+V + P RDLC+++PTGSGKTL+Y++PIV+ L
Sbjct: 345 LGVSEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYSVPIVEVLRT 404
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + LRAL+VLPTRDL + QV
Sbjct: 405 RQIVRLRALIVLPTRDL---------------------------------------VSQV 425
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+ +A GL +G A GQ S A E ++L+ + D ED +L+S VDILV
Sbjct: 426 RSTLELLAKGSGLRIGTATGQHSFAHEQNQLVG----TSSSDEDEEDA--QLESKVDILV 479
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DH+++T GFTL HL +LV+DE DRLL +++Q WL VL T + S
Sbjct: 480 ATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQSFQEWLRRVLAATEGTANSDVHSQS 539
Query: 232 TFLPSAFGSLKTIRRCGV----ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
A L T G+ + +++ P + K++ SATLT+DP K+A L L +P +
Sbjct: 540 RGSAQAPYELLTSSASGLGAATQSTLQEEAVPSVQKLLFSATLTRDPAKIAALGLRNPHY 599
Query: 288 LTTGET------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEE-- 327
+T +T R+ LP L + L+ S KP +L+ LL ++
Sbjct: 600 ITVQDTHSAGDDENGRVNGAQQHERFSLPHSLREHMLVTTSADKPFHLLYLLHRPDQDVD 659
Query: 328 -------KCIVFTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQRQSVR 368
K + FT SV+S RL L+ F ++R + +K YS + S R
Sbjct: 660 NNDSRIRKALCFTKSVDSAARLVKLIEIFEQVRSENGLVSRGSRPLVVKNYSSELKPSDR 719
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
+ L AF +G+I +LV SD ++RG+D+ V +VV+YD P Y+HR GRTARAG+ G
Sbjct: 720 QRILAAFAQGEIDLLVCSDLISRGIDLPSVEHVVSYDAPIDPAKYVHRVGRTARAGKHGD 779
Query: 429 CFTLLHKDEVKRFKKLLQ 446
+TL+ + E + FKK+++
Sbjct: 780 AWTLVEEQEARHFKKMIR 797
>gi|213511024|ref|NP_001133236.1| ATP-dependent RNA helicase DDX51 [Salmo salar]
gi|209147204|gb|ACI32879.1| ATP-dependent RNA helicase DDX51 [Salmo salar]
Length = 678
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 176/493 (35%), Positives = 251/493 (50%), Gaps = 89/493 (18%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSN 51
GI LFPVQ V E++ GL RD+C+++PTGSGKTL++ +P++Q L
Sbjct: 233 GIHHLFPVQAEVIPAILESVSHGLLIGRGGYKPRDVCVSAPTGSGKTLAFVIPVIQALIG 292
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +R L VLPT++LA QV CK
Sbjct: 293 RVVCKVRVLAVLPTKELAQQV--------CK----------------------------- 315
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF++ A L V + GQ S A E + L + GI + S DI+V
Sbjct: 316 --VFSSYAEGNSLKVVMLAGQKSFAAEQALLSEN---RGGISH----------SLADIVV 360
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHIN GF+LEHL +L++DE DR++ +Q+WL V + R S+A
Sbjct: 361 ATPGRLVDHINKNDGFSLEHLRFLIIDEADRMIDSMHQSWLSQVTKAVY--RPRRVSEAV 418
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 290
+ K + P L K++ SATLTQ+P KL QL LH P ++
Sbjct: 419 SIF-------KRTEPAPITAASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSV 471
Query: 291 ---------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 341
+ R+ P+ L Y + C KPL ++ + L + FT+S E+THR
Sbjct: 472 HSQSTTNPESQERFNFPQGLTEYYVPCTLSKKPLLILHFILRLKFSPILCFTNSREATHR 531
Query: 342 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 401
L L+ FG ++ E+S + R +TLK F +GKIQ+L+S+DA RG+D+ GV V
Sbjct: 532 LFLLVQLFGG--VQAAEFSSRLSPNERMRTLKEFEQGKIQLLISTDAAARGIDINGVKCV 589
Query: 402 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS---I 458
VNYD P +I+TYIHR GRTARAG+ G FT L + K+F ++++ D S IH +
Sbjct: 590 VNYDAPQFIRTYIHRVGRTARAGKSGLAFTFLLGVQEKKFLQMVK--DAGSPGIHKQIVM 647
Query: 459 PSSLIESLRPVYK 471
P +L +S+ P Y+
Sbjct: 648 PGNL-KSMEPRYE 659
>gi|336383556|gb|EGO24705.1| hypothetical protein SERLADRAFT_369949 [Serpula lacrymans var.
lacrymans S7.9]
Length = 651
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 175/493 (35%), Positives = 245/493 (49%), Gaps = 95/493 (19%)
Query: 1 MGISSLFPVQVAVW-----QETIGPGLFE-----RDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ + ++ GL+ RD+C+++PTGSGKTL+Y LPIV+TLS
Sbjct: 187 LGITELFAVQTRLLPFLLPRDARKRGLYAPYAPPRDVCVSAPTGSGKTLAYVLPIVETLS 246
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
+R + LRALVVLPTRDL +QV
Sbjct: 247 SRIITRLRALVVLPTRDLVMQV-------------------------------------- 268
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
++ F + GL VG A GQ S A E S+LI D L S +DIL
Sbjct: 269 -RETFEEVGKGRGLKVGTATGQHSFAHEQSQLIA----------DRSSGLLGGSSKIDIL 317
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR---------- 220
+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q W+ V+ TR
Sbjct: 318 ICTPGRLVDHMNGTPNFSLQHLRFLVIDEADRLLAQSFQDWVARVVTATRPTTFPSSGTP 377
Query: 221 -SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD-KPYPRLVKMVLSATLTQDPNKLA 278
++ E F A P + I G+ D KP K++ SATL +DP KLA
Sbjct: 378 RAEEEETFGCADGLAPPLLHAKYAIANT---YGYMDEKPSSSCQKLLFSATLPRDPGKLA 434
Query: 279 QLDLHHPLFLTTGETR--------------YKLPERLESYKLICESKLKPLYLVALLQSL 324
L L + + R Y +P L + ++C S KPL L L+Q
Sbjct: 435 GLQLRDVKYFVVQKARGGREEGVLDVVMERYTMPATLREHMIVCASSEKPLVLFDLVQRH 494
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHF-------GELRIKIKEYSGLQRQSVRSKTLKAFRE 377
+VFT S EST RL L F G L + K YS R L+ F+
Sbjct: 495 KVRNGLVFTKSAESTARLVRLFELFEKAVAGEGRLGVVAKAYSSDLSVGERRGILEKFKA 554
Query: 378 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
+IQ+LV SD ++RGMD+ V++VV+YD P ++ Y+HR GRTARAG+ G +TL+ + E
Sbjct: 555 EEIQILVCSDLISRGMDMSHVSHVVSYDVPVDMRKYVHRVGRTARAGREGDAWTLVEEQE 614
Query: 438 VKRFKKLLQKADN 450
+ FK++L +AD+
Sbjct: 615 ARYFKRMLSEADH 627
>gi|58264962|ref|XP_569637.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109595|ref|XP_776912.1| hypothetical protein CNBC4030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259592|gb|EAL22265.1| hypothetical protein CNBC4030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225869|gb|AAW42330.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 701
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 249/484 (51%), Gaps = 87/484 (17%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLC------INSPTGSGKTLSYALPIVQTLSNRAV 54
+GI F VQ A+ + L C I++PTGSGKTL+Y +PI++ LS R +
Sbjct: 236 IGIEDFFAVQAAMLPRLLPLQLIPSPYCPLPDYLISAPTGSGKTLAYTIPILEILSQRTI 295
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL+VLPTRDL QV ++
Sbjct: 296 CRLRALIVLPTRDLVFQV---------------------------------------RET 316
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
A++ GL++G GQ S A E +L+ D + L S +DIL+ATP
Sbjct: 317 MEALSKGTGLTIGTVTGQHSFAQERKQLVA----------DLDTPLLGGSSKLDILIATP 366
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRLMDH+ +T FTL+HL +LV+DE DRLL +++Q WL VL TR E A +F
Sbjct: 367 GRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQDWLTQVLAYTRPPVE---PIAPSFK 423
Query: 235 PSAFGSLKT--IRRCGV--ERGFKDKPYPRLV-KMVLSATLTQDPNKLAQLDLHHPLFL- 288
+ ++ + + CG+ +RG P + K++ SATLT+DP+K+A L LHHP +
Sbjct: 424 RKPYDTVSSAFMEACGLVDKRGEWCDSSPSICQKLLFSATLTRDPSKVAALSLHHPQYYI 483
Query: 289 -----------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ--SLGEEKCIVFTSS 335
+ GE ++ LP L LI LKPL L+ L+ ++ +VFT S
Sbjct: 484 VQSSSVPALPTSVGE-QFALPSSLSEKMLILPPALKPLNLIHLIHHSEFNVDRALVFTKS 542
Query: 336 VESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 386
VES RL LL F G R+ +++YSG R + + L F EGK+ ++V S
Sbjct: 543 VESAARLVKLLEFFEDAYVLGGGGGKRLVVEQYSGETRAKDKKQLLAEFGEGKVNLIVCS 602
Query: 387 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
D + RG+D+ V++VV+YD P I+ Y+HR GRTARAG+ G +TL+ K E FK +LQ
Sbjct: 603 DLIARGIDLPSVSHVVSYDIPLDIRKYVHRVGRTARAGRQGTAWTLVEKQEALHFKGMLQ 662
Query: 447 KADN 450
A +
Sbjct: 663 NAGH 666
>gi|348537210|ref|XP_003456088.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Oreochromis
niloticus]
Length = 621
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 233/473 (49%), Gaps = 89/473 (18%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI FPVQ V IG G ++ RD+C+++PTGSGKTLS+ +PI+Q L +
Sbjct: 177 GIQHFFPVQAEVIPAILESAQQGLLIGRGGYKPRDICVSAPTGSGKTLSFVIPIIQVLMD 236
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RAL VLPT++LA QV+
Sbjct: 237 RVVCEVRALAVLPTKELAQQVHR------------------------------------- 259
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VFA+ A L V + GQ S A E + L E +S DI+V
Sbjct: 260 --VFASYAEGTSLKVVMLAGQKSFAAEQASL-------------SEHRWNMRRSLADIVV 304
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DH+ G LEHL +LV+DE DR++ +Q+WL V+ +R S
Sbjct: 305 ATPGRLIDHMTKNSGLCLEHLRFLVIDEADRMIDSMHQSWLSQVMGAV---YRSRAEPGS 361
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--- 288
F +T C + P L K++ SATLTQ+P KL QL LH P
Sbjct: 362 VFR-------RTEAAC-ITSASLSPPQTPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSA 413
Query: 289 -----------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 337
T G R+ P+ L Y + C KPL L+ + + + FT+S E
Sbjct: 414 HGQADSTAASPTHGHDRFNFPQGLTEYYVPCTMSSKPLLLLHFILRMKLHPILCFTNSRE 473
Query: 338 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
+ HRL LL FG ++ E+S R KTLK F +GKIQ+L+S+DA+ RG+D+ G
Sbjct: 474 TAHRLHLLLQLFGG--VQAAEFSSQLSPGDRKKTLKEFEQGKIQLLISTDAVARGIDISG 531
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
V VVNYD P YI+TYIHR GRTARAG+ G FT L + + K F +++ KA +
Sbjct: 532 VKCVVNYDAPQYIRTYIHRVGRTARAGKTGLAFTFLLRVQEKNFLQMVVKAGS 584
>gi|219122463|ref|XP_002181564.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406840|gb|EEC46778.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 453
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 248/478 (51%), Gaps = 86/478 (17%)
Query: 2 GISSLFPVQVAVWQETIGPG----LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 57
G ++ FP+Q + I + RD+CI +PTGSGKTL+Y LP++ +L+NR +R L
Sbjct: 27 GFANFFPIQALAIPDVIASERHAYIQARDVCITAPTGSGKTLAYVLPVLNSLANRKIRRL 86
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
RALVVLP+RDLA QV VF +
Sbjct: 87 RALVVLPSRDLA---------------------------------------NQVFKVFKS 107
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD-PEDVLQELQSAVDILVATPGR 176
L VGLA+GQS E ++ E G +D PE ++ QS +D+LV TPGR
Sbjct: 108 FMEGSDLKVGLAIGQSDFVAEQMAILALQAFEDGNDHDLPEK--RDPQSTIDVLVCTPGR 165
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH++ T GF+LEHL +L+VDE DRLL + Y W+ V+Q S D + F +
Sbjct: 166 LVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVIQSANSGRGGVVGDDTDF--N 223
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL--------DLH----- 283
S +++ +P +L K ++SATLT+DP KLA L D+H
Sbjct: 224 TNDSYRSVASSVC------RPV-QLRKFLVSATLTRDPQKLASLKLVNPKHFDVHQLRTG 276
Query: 284 HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL---------QSLGEEKCIVFTS 334
H F T +Y +PE L + + C ++ KP+ L+AL+ QS ++ IVFT+
Sbjct: 277 HQGFFNTNTKKYSMPEGLHEHTVECTAEQKPIVLLALVLDQLTPQQSQSSSKQSVIVFTA 336
Query: 335 SVESTHRLCTLLN------HFGELRIKIKEYSGLQRQSVRSKTLKAFR--EGKIQVLVSS 386
S++STHRL LL +GE + E+S Q RS +K + K+ V+V S
Sbjct: 337 SLDSTHRLARLLQLLWVSAGYGEPD-SVVEFSSALNQHERSALMKRCNDPQDKVSVVVCS 395
Query: 387 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
D M+RGMD++ V V+NYD P KTY+HR GRTARAG+ G +LL + ++F K+
Sbjct: 396 DGMSRGMDIDAVRAVINYDVPGLAKTYVHRCGRTARAGKEGHAISLLKGGQTRQFDKM 453
>gi|395840150|ref|XP_003792928.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Otolemur garnettii]
Length = 665
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 249/493 (50%), Gaps = 86/493 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GIS FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L
Sbjct: 217 GISFYFPVQAAVIPTLLESAANGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLQ 276
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 277 RVVCHVRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 306
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
L V L GQ ++A E L+++ + DI+V
Sbjct: 307 ---------TTPLRVALITGQKTLAKEQESLVQK-------------TTDGYRCLADIVV 344
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +LV+DE DR++ +Q+WLP V+ F
Sbjct: 345 ATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQGEG 397
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT- 290
P + ++ V P L K++ SATLTQ+P KL QL LHHP +T
Sbjct: 398 PPDPCVLLQRRQLQ--AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHHPRLFSTS 455
Query: 291 ----------GET--RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
G+ +Y P L + + C KPL ++ L+ + + FT+S E+
Sbjct: 456 LACKGPQDADGDVGGKYAFPVGLTHHYVPCSLSTKPLLVLHLILEKSFSRVLCFTNSREN 515
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
+HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG+DV+GV
Sbjct: 516 SHRLFLLVQAFGG--VSVAEFSSRYGPGQRKMILKQFEQGKIQLLISTDATARGIDVQGV 573
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
V+NYD P Y++TY+HR GRTARAG G+ FTLL K + +RF ++L + + H +
Sbjct: 574 ELVINYDAPQYLRTYVHRVGRTARAGNAGQAFTLLLKVQERRFLRMLTEGGVPALQRHEL 633
Query: 459 PSSLIESLRPVYK 471
S L++ L P Y+
Sbjct: 634 LSELLQPLVPRYE 646
>gi|384494370|gb|EIE84861.1| hypothetical protein RO3G_09571 [Rhizopus delemar RA 99-880]
Length = 483
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 241/456 (52%), Gaps = 85/456 (18%)
Query: 1 MGISSLFPVQVAVW-----QETIGPGL-FERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
+G+SSLF VQ+AV +T+ + DLCI++PTGSGKT++YALPIV LS R V
Sbjct: 55 IGLSSLFAVQMAVIPVFLRHKTLYDTIKVSGDLCISAPTGSGKTMAYALPIVDILSKRVV 114
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
+ LRA+VVLPTRDL +QV K+
Sbjct: 115 KRLRAVVVLPTRDLVVQV---------------------------------------KET 135
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
F A L V GQ S E L+ + E+ +S VDIL+ATP
Sbjct: 136 FDAFVKGTDLVVAAVSGQQSFTHEQHVLVG----------NEEESYPGGKSRVDILIATP 185
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF- 233
GRL+DH+N+T FTL+H+ +LV+DE DRLL +++ WL +L T N +DA
Sbjct: 186 GRLIDHLNSTPNFTLQHVRFLVIDEADRLLNQSFNDWLNRILLAT---NPVVNADAPLLG 242
Query: 234 ---------LPSAFGSLKTIRRCGVERGFKDKPYPR---LVKMVLSATLTQDPNKLAQLD 281
LP A T + + D P+ + K++ SATLT++P K+A L
Sbjct: 243 FKTDKNGITLPDAIAP--TFLQSHYKLPVTDLDIPKAPFIQKLLFSATLTKNPAKIAGLH 300
Query: 282 LHHPLFLTT-------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
L+ P +++ + Y PE L+ Y +I ++ KPL ++ LL LG + + FT
Sbjct: 301 LNEPEYISVQHEDEDHAQREYTTPEGLKEYMIIVSTEKKPLTVIYLLHQLGVKSGLCFTK 360
Query: 335 SVESTHRLCTLLNHFGEL-----RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
SVEST RL TL+N + L RIK+KEYS R + R LK F++G+I +L+ SD +
Sbjct: 361 SVESTERLQTLINAYEALQPEEKRIKVKEYSSELRPTERKAVLKQFKDGEIDLLICSDLI 420
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
RG+D++ V VV+YD PAY+ YIHR GRTARAG+
Sbjct: 421 GRGIDLDSVEYVVSYDAPAYMDKYIHRVGRTARAGR 456
>gi|392594884|gb|EIW84208.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 620
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 246/488 (50%), Gaps = 91/488 (18%)
Query: 1 MGISSLFPVQVAVWQ----ETIG------PGLFERDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ A+ ET P RD+C+++PTGSGKTL+Y LPIV+ LS
Sbjct: 152 LGITELFAVQTALLPFLLPETHSQRALYVPYEPLRDVCVSAPTGSGKTLAYVLPIVEILS 211
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R V LRAL+VLPTRDL + Q
Sbjct: 212 TRIVTRLRALIVLPTRDL---------------------------------------VTQ 232
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F ++ GL G A GQ S + E S+L+ D L+ S VDIL
Sbjct: 233 VRETFEVVSKGRGLKTGTATGQHSFSHEQSQLVA----------DSSTSLRGGSSKVDIL 282
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DHIN T F+L+HL +LV+DE DRLL +++Q WL VL T + A
Sbjct: 283 ICTPGRLIDHINGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQVLAATLPPDHA--GAA 340
Query: 231 STF------LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 284
TF LP+ G T + ++ K++ SATLT+DP KLA L L
Sbjct: 341 YTFPTDRYGLPTPDGLAPTFVHH-FQTDIDEEKESSCQKLLFSATLTRDPGKLAALKLRD 399
Query: 285 PLFLTT------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
P + GE ++ +P L+ + +ICE KPL L LLQ+ + ++F
Sbjct: 400 PKYFVVQAKEKLDGNDYVGE-QFTMPATLKEHMIICEPSQKPLMLFYLLQNRSVDNALIF 458
Query: 333 TSSVESTHRLCTLLNHFGELR----------IKIKEYSGLQRQSVRSKTLKAFREGKIQV 382
T S EST RL L HF + + I+ YS R + L+ F+ ++ +
Sbjct: 459 TKSSESTSRLVRLFEHFATFKQSGAASEDDKLVIQAYSSDLPAGERKRILEKFKAKEVHL 518
Query: 383 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 442
LV SD ++RG+D+ V +VV+YD P ++ Y+HR GRTARAG+ G +TL+ + E + FK
Sbjct: 519 LVCSDLVSRGIDISHVAHVVSYDAPVDMRKYVHRVGRTARAGREGHAWTLVEEQEARYFK 578
Query: 443 KLLQKADN 450
+L+ AD+
Sbjct: 579 TMLKTADH 586
>gi|443895519|dbj|GAC72865.1| protein kinase [Pseudozyma antarctica T-34]
Length = 860
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 255/499 (51%), Gaps = 102/499 (20%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+G+S F VQV+V + P RDLC+++PTGSGKTL+Y +PIV+ L
Sbjct: 356 LGVSEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYTVPIVEVLRT 415
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + LRAL+VLPTRDL QV S
Sbjct: 416 RQIVRLRALIVLPTRDLVSQVRS------------------------------------- 438
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+A GL + A G S A E ++L++ G+ D +D + QS VDIL+
Sbjct: 439 --TLELVAKGSGLRIATATGHHSFAHEQTQLVE------GLDADDDDDSVQKQSKVDILI 490
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR--SDNENRFSD 229
ATPGRL+DH+++T GFTL HL +LV+DE DRLL +++Q WL VL T ++ ++R ++
Sbjct: 491 ATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQSFQEWLRRVLSATEGVANADSRCTE 550
Query: 230 AS------TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 283
A+ L SA R ++ ++ P + K++ SATLT+DP K+A L L
Sbjct: 551 ATPAQAPYELLSSASSGFGAAARSTLQ----EEAVPSVQKLLFSATLTRDPAKIAALGLR 606
Query: 284 HPLFLTT--------GET---------RYKLPERLESYKLICESKLKPLYLVALLQSLGE 326
+P ++T GE+ R+ LP L + L+ S KP +L+ LL +
Sbjct: 607 NPHYITVQDDNPAADGESGLAERAQHERFSLPHSLHEHMLVTTSADKPFHLLYLLHRPDD 666
Query: 327 E-------KCIVFTSSVESTHRLCTLLNHFGELR------------IKIKEYSGLQRQSV 367
E K + FT SVES RL L+ F E+R + +K YS R S
Sbjct: 667 EQAAAKIRKALCFTKSVESAARLVKLVEMFEEVRQESGLIARGARPMVVKNYSSELRPSD 726
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R + L F G+I +LV SD ++RG+D+ V +V++YD P Y+HR GRTARAG+ G
Sbjct: 727 RQRILAQFGNGEIDLLVCSDLISRGIDLPSVEHVISYDAPVDSAKYVHRVGRTARAGKHG 786
Query: 428 RCFTLLHKDEVKRFKKLLQ 446
+TL+ + E + FKK+++
Sbjct: 787 DAWTLVEEQEARHFKKMVR 805
>gi|402224982|gb|EJU05044.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 540
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 256/501 (51%), Gaps = 114/501 (22%)
Query: 1 MGISSLFPVQVAVWQETI-GP----GLFE-----RDLCINSPTGSGKTLSYALPIVQTLS 50
+G+ +LF VQ A+W + GP GL+E RD+C+++PTGSGKTL+YA+PIV+ LS
Sbjct: 68 LGVDNLFAVQAALWPWLLTGPEARRGLYEPRRAPRDVCVSAPTGSGKTLAYAVPIVEILS 127
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R V LR+LV+LPTRDL VQ Q
Sbjct: 128 VRVVTRLRSLVILPTRDL-----------------------------VQ----------Q 148
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
VK+ F A+ GL VG A G S A E L++ D E LQ S +DIL
Sbjct: 149 VKETFEALCKGTGLKVGSATGAQSWAKEQKALVE----------DLETKLQGGSSNIDIL 198
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNE----- 224
V TPGRL+DH++ T F+L+HL +LV+DE DRLL +++Q++LP +L LT + +
Sbjct: 199 VCTPGRLIDHLDDTPNFSLQHLRFLVIDEADRLLSQSFQSFLPRLLTALTPTPHPVPPSS 258
Query: 225 -----NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 279
+ S A LP FG + C K++ SAT+T+DP L
Sbjct: 259 DLLIPDALSPAWLDLPHEFGWAPMLPSCQ--------------KLLFSATMTRDPGVLKS 304
Query: 280 LDLHHP-LFLTT----GE-------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
L L +P F+ T GE + +P+ L Y L+ + LKPLYL LL +
Sbjct: 305 LGLRNPKYFIVTAAPEGERDEAIIREEFSVPDTLSEYLLVVPTDLKPLYLFHLLHTHPIT 364
Query: 328 KCIVFTSSVESTHRLCTLLNHF------------------GELRIKIKEYSGLQRQSVRS 369
+VFT S EST RL L F G +I + +S + R
Sbjct: 365 NALVFTKSTESTTRLLKLFEFFESARLSVSTSVSASAQDGGSPQILARAFSSELGKGERK 424
Query: 370 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 429
L F++G+I+VLV+SD ++RG+D+ V++VVNYD P ++ Y+HRAGRTARAG+ G
Sbjct: 425 SILDQFKQGRIRVLVASDLVSRGIDIPDVSHVVNYDSPLDMRKYVHRAGRTARAGREGEV 484
Query: 430 FTLLHKDEVKRFKKLLQKADN 450
++L+ E + +++L+ A +
Sbjct: 485 WSLVESQEARWVREMLKAAGH 505
>gi|405123262|gb|AFR98027.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. grubii
H99]
Length = 718
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 245/482 (50%), Gaps = 87/482 (18%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
+G+ F VQ A+ + L D I++PTGSGKTL+Y +PI++ LS R V
Sbjct: 253 IGVEDFFAVQAAMLPRLLPLQLIPSPYSPLPDYLISAPTGSGKTLAYTIPIIEILSQRTV 312
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL++LPTRDL QV ++
Sbjct: 313 CRLRALIILPTRDLVFQV---------------------------------------RET 333
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
A++ GL++G GQ S A E +L+ D + L S +DIL+ATP
Sbjct: 334 MEALSKGTGLTIGTVTGQHSFAQERKQLVA----------DLDTPLLGGSSKLDILIATP 383
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRLMDH+ +T FTL+HL +LV+DE DRLL +++Q WL VL TR E A +F
Sbjct: 384 GRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQDWLTQVLAYTRPPVE---PIAPSFK 440
Query: 235 PSAFGSLKT--IRRCGV---ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL- 288
+ ++ + + CG+ + D K++ SATLT+DP+K+A L LHHP +
Sbjct: 441 RKPYDTVSSAFMEACGLVNKSEEWCDSSPSICQKLLFSATLTRDPSKVAALSLHHPQYYI 500
Query: 289 -----------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ--SLGEEKCIVFTSS 335
+ GE ++ LP L LI LKPL L+ L+ ++ +VFT S
Sbjct: 501 VQSSSAPALPTSVGE-QFALPSSLSEKMLILPPALKPLNLIHLIHHPEFNVDRALVFTKS 559
Query: 336 VESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 386
VES RL LL F G R+ I++YSG R + + L F EGKI ++V S
Sbjct: 560 VESAARLVKLLEFFEDAYVLGGGGGKRLVIEQYSGEMRARDKKQLLAEFGEGKINLIVCS 619
Query: 387 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
D + RG+D+ V++VV+YD P I+ Y+HR GRTARAG+ G +TL+ K E FK +LQ
Sbjct: 620 DLIARGIDLPSVSHVVSYDIPLDIRKYVHRVGRTARAGRQGTAWTLVEKQEALHFKGMLQ 679
Query: 447 KA 448
A
Sbjct: 680 NA 681
>gi|71004804|ref|XP_757068.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
gi|46096872|gb|EAK82105.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
Length = 870
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 253/500 (50%), Gaps = 98/500 (19%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+GIS F VQV+V + P RDLC+++PTGSGKTL+Y++PIV+ L
Sbjct: 361 LGISEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYSVPIVEVLRT 420
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + LRAL+VLPTRDL + QV
Sbjct: 421 RQIVRLRALIVLPTRDL---------------------------------------VSQV 441
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+ +A GL +G A GQ S A E ++L+ + + D ++ E + +DIL+
Sbjct: 442 RSTLELVAKGSGLRIGTATGQHSFAHEQNQLVGS---SSAVDQDQDEAQSEPK--IDILI 496
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT--RSDNENRFSD 229
ATPGRL+DH+++T GF L HL +LVVDE DRLL +++Q WL VL T ++D R
Sbjct: 497 ATPGRLIDHLDSTPGFNLAHLRFLVVDEADRLLNQSFQEWLRRVLAATNGKTDQAERERA 556
Query: 230 ASTFLPSA-----FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 284
+ P+ F S + +++ P + K++ SATLT+DP K+A L L +
Sbjct: 557 SQKSGPAQAPFELFSSSASGLGAAATSTLQEEAAPSVQKLLFSATLTRDPAKIAALGLRN 616
Query: 285 PLFLTTGET------------------RYKLPERLESYKLICESKLKPLYLVALLQ---- 322
P ++T +T ++ LP L + L+ S KP +L+ LL
Sbjct: 617 PHYITVQDTNSAGDEDQGRANGVQQHEQFSLPHSLHEHMLVTTSADKPFHLLYLLHRPDD 676
Query: 323 ---SLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQRQS 366
LG K + FT SV+S RL LL F E+R++ +K YS + S
Sbjct: 677 VNNELGRIRKALCFTKSVDSAARLVKLLEIFEEVRVENSLIARGSRALVVKNYSSELKPS 736
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R + L AF +G+I +LV SD ++RG+D+ V +V++YD P Y+HR GRTARAG+
Sbjct: 737 DRQRILSAFEKGEIDLLVCSDLISRGIDLPSVEHVISYDAPIDPAKYVHRVGRTARAGKH 796
Query: 427 GRCFTLLHKDEVKRFKKLLQ 446
G +TL+ + E + FKK ++
Sbjct: 797 GDAWTLVEEQEARHFKKTVR 816
>gi|388582635|gb|EIM22939.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 675
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 241/493 (48%), Gaps = 102/493 (20%)
Query: 1 MGISSLFPVQVAVWQETIG-----------PGLFERDLCINSPTGSGKTLSYALPIVQTL 49
+G SLF VQ+A IG P RD+C+++PTGSGKTL Y LPIV+ +
Sbjct: 209 VGFESLFAVQLAAIPLLIGDLKENIRHPLYPSESPRDICVSAPTGSGKTLGYTLPIVEII 268
Query: 50 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 109
S R V LRALVVLPTRDL +
Sbjct: 269 SRRLVTRLRALVVLPTRDL---------------------------------------VS 289
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP-KLEAGICYDPEDVLQELQSAVD 168
QVK+ F A L VG GQ S E ++L+ + + AG C S VD
Sbjct: 290 QVKETFEIFAKGTDLKVGTITGQQSFQQEQAKLVDQTDSVLAGGC-----------SKVD 338
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLV---------------VDETDRLLREAYQAWL- 212
IL+ATPGRL+DHIN+T FTL+HL +LV +DE DRLL +++Q+W+
Sbjct: 339 ILIATPGRLIDHINSTPNFTLQHLRFLVGILTYIFMELIYAKVIDEADRLLNQSFQSWID 398
Query: 213 --------PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
P Q R ++ S + ++T R +RG + KM
Sbjct: 399 RIQVALTTPIQTQPKRDTHDALGYPNSMLIDEKHDLIETFERP--QRGVQ--------KM 448
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALL 321
+ SATLT DP+K+ L L+ P F+ + Y +P LE ++ E+ KPL L+ LL
Sbjct: 449 LFSATLTTDPSKIRSLHLNEPKFVIVRNNKVEDYAIPTTLEERMIVSETAYKPLMLLHLL 508
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGEL---RIKIKEYSGLQRQSVRSKTLKAFREG 378
G + + FT SVES RL LL F E + +S R K L FR+G
Sbjct: 509 HQRGVRRALCFTKSVESATRLMHLLRLFKEEVGNGPTVASFSSDLSPQERQKMLTKFRDG 568
Query: 379 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
++ +L+S+D + RG+D++G+ NV+NYD P + Y+HR GRTARAG +G+ +TL+ E
Sbjct: 569 EVDMLISTDVIARGIDIQGIENVINYDIPLDMPKYVHRVGRTARAGLVGKAWTLVEVQEA 628
Query: 439 KRFKKLLQKADND 451
K FK + A ++
Sbjct: 629 KYFKTYTKNAKHE 641
>gi|321253768|ref|XP_003192843.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317459312|gb|ADV21056.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 702
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 245/490 (50%), Gaps = 103/490 (21%)
Query: 1 MGISSLFPVQVAVW------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
+G+ F VQ A+ Q P D I++PTGSGKTL+YA+PI++ LS R V
Sbjct: 237 IGVEDFFAVQAAMLPRLLPLQLIPSPYSSLPDYLISAPTGSGKTLAYAIPIIEILSQRTV 296
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL+VLPTRDL QV ++
Sbjct: 297 CRLRALIVLPTRDLVFQV---------------------------------------RET 317
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
A++ GL++G GQ S A E +L+ D E L S +DIL+ATP
Sbjct: 318 MEALSKGTGLTIGTVTGQHSFAQERKQLVA----------DLETPLLGGSSKLDILIATP 367
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRLMDH+ +T FTL+HL +LV+DE DRLL +++Q WL VL TR E +
Sbjct: 368 GRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQNWLTQVLAYTRPPIEP--------I 419
Query: 235 PSAFGSLKTIRRCGVERGF--------KDKPY----PRLV-KMVLSATLTQDPNKLAQLD 281
P +F K V F KD + P + K++ SATLT+DP+K+A L
Sbjct: 420 PPSF---KRKPHDTVSSAFMEACSLIDKDGEWCDSSPSICQKLLFSATLTRDPSKIAALS 476
Query: 282 LHHPLFL------------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ--SLGEE 327
LHHP + + GE ++ LP L LI LKPL L+ L+ +
Sbjct: 477 LHHPQYYIVQSSIAPALPTSVGE-QFALPSSLSEKMLIVPPALKPLNLIHLVHHSEFNVD 535
Query: 328 KCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAFREG 378
+ +VFT SVES RL LL F G R+ +++YSG + + + L F EG
Sbjct: 536 RALVFTKSVESAARLVKLLEFFEDAYVLGGGGGKRLAVEQYSGEMKARDKKQLLAEFGEG 595
Query: 379 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
K+ ++V SD + RG+D+ V++VV+YD P I+ Y+HR GRTARAG+ G +TL+ K E
Sbjct: 596 KVNLIVCSDLIARGIDLPSVSHVVSYDIPLDIRKYVHRVGRTARAGRQGTAWTLVEKQEA 655
Query: 439 KRFKKLLQKA 448
FK +LQ A
Sbjct: 656 LHFKGMLQNA 665
>gi|388851453|emb|CCF54855.1| related to DBP6-ATP-dependent RNA helicase [Ustilago hordei]
Length = 869
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 250/498 (50%), Gaps = 95/498 (19%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+G+S F VQ++V + P RDLC+++PTGSGKTL+Y +PIV+ L
Sbjct: 358 LGVSEWFAVQISVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYTVPIVEVLRT 417
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + LRAL+VLPTRDL + QV
Sbjct: 418 RQIVRLRALIVLPTRDL---------------------------------------VSQV 438
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+ +A GL +G A GQ S A E S+L+ L G Y+ ++ L+E S VD+L+
Sbjct: 439 RSTLELVAKGSGLRIGTATGQHSFAHEQSQLVW--SLSVGDDYEEQNALKE--SKVDVLI 494
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF---- 227
ATPGRL+DH+++T GFTL HL +LV+DE DRLL +++Q WL VL T +
Sbjct: 495 ATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQSFQEWLRRVLAATEGKGTDAVPQWK 554
Query: 228 SDASTFLPSAFGSLKTIRRCGVERG-FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 286
+A+ P S G +++ P + K++ SATLT DP K+A L L +P
Sbjct: 555 GEAAAQAPHELLSGNASGLGGAAWSTLQEEAVPSVQKLLFSATLTSDPAKIAALGLRNPH 614
Query: 287 FLTTGET------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGE-- 326
++T ++ R+ LP L + L+ S KP +L+ LL +
Sbjct: 615 YITVQDSHSAGDEEDGRSNGSQQHERFSLPHSLHEHMLVTTSADKPFHLLYLLHRPDDVE 674
Query: 327 ------EKCIVFTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQRQSVR 368
K + FT SV+S RL L+ F ++R + +K YS + S R
Sbjct: 675 QNSSRIRKALCFTKSVDSAARLVKLIEIFEQVRSESGLIQRGSRPFVVKNYSSELKPSER 734
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
+ L F +G+I +LV SD ++RG+D+ V +VV+YD P Y+HR GRTARAG+ G
Sbjct: 735 QRILTQFGQGEIDLLVCSDLISRGIDLPTVEHVVSYDAPIDPAKYVHRVGRTARAGKHGD 794
Query: 429 CFTLLHKDEVKRFKKLLQ 446
+TL+ + E + FKK+++
Sbjct: 795 AWTLVEEQEARHFKKMVR 812
>gi|393221493|gb|EJD06978.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 496
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 240/496 (48%), Gaps = 97/496 (19%)
Query: 1 MGISSLFPVQVAVW-----QETIGPGLF-----ERDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ F VQ A+ + L+ +D+C ++PTGSGKTL+Y +PIV+ LS
Sbjct: 8 LGINEFFAVQTALLPFLLPSKRCSRALYLPYDPPQDVCASAPTGSGKTLAYVIPIVEILS 67
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R LRALVVLPTRDL LQV
Sbjct: 68 ARIATKLRALVVLPTRDLVLQV-------------------------------------- 89
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
++VF A+ GL +G+A GQ S A E +L+ P + G Q S VDIL
Sbjct: 90 -QEVFEAVGKGRGLKIGVATGQHSFAHEQGQLV--PDQDKGS--------QGGASKVDIL 138
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR------SDNE 224
+ TPGRLMDH+N T GFTL+HL +LV+DE DRLL +++Q WL VL R SD
Sbjct: 139 ICTPGRLMDHLNGTPGFTLQHLRFLVIDEADRLLAQSFQDWLAQVLSALRPPTQSISDGV 198
Query: 225 NRFS----DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
+ S AS+ L S+ + D + K++ SATLT+DP ++A L
Sbjct: 199 SSLSLNKPGASSILGFGHDSIAPAFLPHIPTDLDDPKHSSCQKLLFSATLTRDPARIAAL 258
Query: 281 DLHHPLFLTT----------------GETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
L P + G + +P L+ + + + KPL L LL +
Sbjct: 259 GLRDPKYFVVQATTSIDRDTSGPAALGMENFAMPPSLKEHYITTPTARKPLILFHLLHNR 318
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHF------------GELRIKIKEYSGLQRQSVRSKTL 372
G +VFT S EST RL LL +F RI + YS R L
Sbjct: 319 GISNALVFTKSAESTARLVKLLEYFEVAYLALSDTVNPPKRIVAQAYSSDLPSGERKNVL 378
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
+ F++ +I +LV SD + RG+D+ V +VV+YD P I+ Y+HRAGRTARAG+ G +TL
Sbjct: 379 EKFKKQEIDILVCSDLVARGLDISHVAHVVSYDAPVDIRKYVHRAGRTARAGRAGDAWTL 438
Query: 433 LHKDEVKRFKKLLQKA 448
+ E K FK +L+ A
Sbjct: 439 VEDQEAKFFKDMLRDA 454
>gi|443730193|gb|ELU15819.1| hypothetical protein CAPTEDRAFT_183322 [Capitella teleta]
Length = 576
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 228/485 (47%), Gaps = 88/485 (18%)
Query: 2 GISSLFPVQVAVWQETIGP------------GLFERDLCINSPTGSGKTLSYALPIVQTL 49
G+ FPVQ + T+ G DLC ++ TGSGKTL+Y +PIVQ L
Sbjct: 132 GVKDFFPVQARLIPATMNSFDKQFPYALTKGGFRPSDLCCSAATGSGKTLAYVVPIVQAL 191
Query: 50 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 109
S R V +RALVVLP RDLA QV C YC
Sbjct: 192 SRRVVPAIRALVVLPVRDLAQQVYKVFCTYCA---------------------------- 223
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
L V L G S +E ++ P + DI
Sbjct: 224 -----------GTNLKVVLTAGYKSFENEQQQMTFGP--------------NGTKCPADI 258
Query: 170 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 229
++ TPGRL+DH+ T+GF L L +LV+DE DRL++E W VL++ + + +
Sbjct: 259 VITTPGRLVDHLIETKGFCLNELRFLVIDEADRLMKEFKFDW---VLKVENAVYHHTYDT 315
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
+ T G + C G+ D P+ L K++ SATL+Q+P L Q+ L P T
Sbjct: 316 SVTS-----GHRFSPNLCSAA-GYDDYPHVGLQKLLFSATLSQNPEVLQQMRLFQPRLFT 369
Query: 290 TGE-----------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
E +Y P L + CE KPL L L+ + + + FT+SV+S
Sbjct: 370 ASEGTDESSQMESINKYVTPASLNEMFIKCEENTKPLVLFHLIHTRKYRQVLCFTNSVKS 429
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
THRLCTLL G ++ ++E S + R KTLK F GKI+++V SD M RGMD+E
Sbjct: 430 THRLCTLLRLMG--KVSVEELSSHISINKRQKTLKKFAAGKIEIVVCSDQMARGMDIENA 487
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
V++YD P +I+ Y+HR GRTAR G G TLL +VK FK++L KA ++
Sbjct: 488 KCVISYDVPNFIQNYVHRVGRTARGGHAGSAITLLDHSQVKFFKEMLHKAGKSDFKTETV 547
Query: 459 -PSSL 462
PS L
Sbjct: 548 KPSEL 552
>gi|410914978|ref|XP_003970964.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Takifugu
rubripes]
Length = 596
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 238/493 (48%), Gaps = 86/493 (17%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI FPVQ V IGPG ++ RD+C+++PTGSGKTL++ +P++Q L
Sbjct: 151 GIDHFFPVQAEVIPAVLESAQQGLLIGPGGYKPRDICVSAPTGSGKTLAFVIPVIQVLMQ 210
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + +RAL VLPT++LA QV
Sbjct: 211 RVICEVRALAVLPTKELAQQVFK------------------------------------- 233
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF+ A L V + GQ S A E + L E +S DI+V
Sbjct: 234 --VFSTYAEGTPLRVLMLAGQKSFAAEQASL-------------SEYRGSRRRSLADIIV 278
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ G LE L +L++DE DR++ +QAWL V++ T S
Sbjct: 279 ATPGRLVDHIHKKSGLNLEQLRFLIIDEADRMIDSMHQAWLSQVVKATYSSGSE------ 332
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
P A+ + P L K++ SATLTQ+P KL QLDLH P ++
Sbjct: 333 ---PEAWSIFSRSEPACITAASLSPPRMPLQKLLFSATLTQNPEKLQQLDLHQPRLFSSN 389
Query: 292 ETR-------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
+ + P+ L + + C KPL ++ + L + FT+S E+
Sbjct: 390 HCQADGTVAAAQKADCFDFPQGLTEFYVPCTLSRKPLLILHFVLRLKLSPILCFTNSREA 449
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
HRL L+ FG ++ E+S + R +TLK F++GKIQ+L+S+DA RG+DV GV
Sbjct: 450 AHRLYLLVQLFGG--VQAAEFSSRLSPAERKQTLKDFQQGKIQLLISTDATARGIDVSGV 507
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
VVNYD P Y++TYIHR GRTARAG+ G FT L + K+F K++ A + +
Sbjct: 508 KCVVNYDAPQYVRTYIHRVGRTARAGKSGLAFTFLLGVQEKKFLKMVMDAGSPGIQKQIV 567
Query: 459 PSSLIESLRPVYK 471
S ++ + Y+
Sbjct: 568 KSESLKGMEGRYE 580
>gi|223999483|ref|XP_002289414.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220974622|gb|EED92951.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 494
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 248/493 (50%), Gaps = 93/493 (18%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSN--------RAVRCLRALVVLPTRDLALQVNSAR 76
RD+C ++PTGSGKTL++ LP++ L N R R LRALVVLP RDLA QV+
Sbjct: 19 RDVCCHAPTGSGKTLAFVLPLLTALYNESPGQSCTRGFRRLRALVVLPGRDLAKQVH--- 75
Query: 77 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG----Q 132
DVF A L +GLAVG +
Sbjct: 76 ------------------------------------DVFVRYAKGSHLKIGLAVGGGKKK 99
Query: 133 SSIADEISELIK---RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 189
S + E L+ + + GI PE QSAVDILVATPGRLMDH+++T GFTL
Sbjct: 100 SDLVYERRSLVAYDGTTRRDNGIQVFPE---FGGQSAVDILVATPGRLMDHLDSTPGFTL 156
Query: 190 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 249
+HL +LV+DE DRL+ + YQ W+ VL+ S++ NRF + +P K G
Sbjct: 157 QHLRFLVIDEADRLVNQPYQNWVGRVLEA--SNSSNRFGSS---VPVVRHGEKDQANTGG 211
Query: 250 E--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERL 301
E G +P P L KM+ SATLTQDP KLA L L +P + Y +PE L
Sbjct: 212 ELVSGMFGRPVP-LRKMLFSATLTQDPQKLAVLGLKNPKHFDANQVENIKAGSYSVPEGL 270
Query: 302 ESYKLICESKLKPLYLVALL--------QSLGE-----EKCIVFTSSVESTHRLCTLLNH 348
+ C ++ KP+ L+ALL S G+ IVFTSSV+STHRL LL
Sbjct: 271 TERMVECTAEQKPMVLLALLLDTEQLHSDSAGDGVKGVNLSIVFTSSVDSTHRLARLLQL 330
Query: 349 FGEL-----RIKIKEYSGLQRQSVRSKTLKAFR----EGKIQVLVSSDAMTRGMDVEGVN 399
E I E+S R+ L+ R ++ VLV SD M+RGMD+ V+
Sbjct: 331 LWEAGGYGPSSTIAEFSSSISAKQRAGILRRCRSSNVSNRVSVLVCSDGMSRGMDLPCVS 390
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
V+NYD P+Y KTY+HR GRTARAG+ G+ ++L ++ +F+++ + S I
Sbjct: 391 AVINYDVPSYAKTYVHRCGRTARAGKEGKAISVLKGGQIAKFQRMRRLIGGGSVEKMGIK 450
Query: 460 SSLIESLRPVYKS 472
LI+ Y++
Sbjct: 451 KELIKGTLSTYQA 463
>gi|390348197|ref|XP_797208.3| PREDICTED: uncharacterized protein LOC592601 [Strongylocentrotus
purpuratus]
Length = 997
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 238/482 (49%), Gaps = 104/482 (21%)
Query: 1 MGISSLFPVQ---VAVWQETIGPGLFE-------RDLCINSPTGSGKTLSYALPIVQTLS 50
MG+ FPVQ + V E++ G+ RDLCI++PTGSGKTL+YA+PI+Q L
Sbjct: 349 MGVEKFFPVQQHVIPVLLESLRDGIHTGHAGYRPRDLCISAPTGSGKTLAYAIPIIQALM 408
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
NR V +RALVVLPTRDLA QV
Sbjct: 409 NRVVCRVRALVVLPTRDLATQVYK------------------------------------ 432
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ +A+ A L L G A E S L++ ++ EL S DI+
Sbjct: 433 ---IISALCKATPLKPVLIGGTKKFAQEQSLLVR-------------EIDGELHSLADIV 476
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
VATPGRL+D+I+ T GF L+HL +LV+DE DRL+ Q W+ V + + D
Sbjct: 477 VATPGRLVDNISQTAGFNLQHLRFLVIDEADRLMEHISQDWIAQVEKSAYTP----LYDN 532
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
T LP+ + + + R + P L K++ SATL+Q+P KL QL L P +TT
Sbjct: 533 GTTLPTFTSNRQRPGPLTINRSSSFQ-LP-LQKLLFSATLSQNPEKLTQLRLFQPRLITT 590
Query: 291 GET----------------------------------RYKLPERLESYKLICESKLKPLY 316
+ +Y P L Y + C + KPL
Sbjct: 591 ATSSRAPPISAWHLDGEKEGVKEEGKEKDEGRTDFVGKYTTPVGLSEYFVQCTAGEKPLV 650
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 376
L L +L ++ + FT+SV++THRL LL G+ +++ E+S QS R LK F+
Sbjct: 651 LQHFLLNLYFKQVLCFTNSVQTTHRLYLLLKLMGD--VEVSEFSSNLSQSERQNILKQFK 708
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
GKIQ+LV SDAM RGMD+E V V++YD P ++KTYIHR GRTARAG+ G F+ + K
Sbjct: 709 AGKIQILVCSDAMARGMDIENVRCVISYDLPPHLKTYIHRVGRTARAGRGGTAFSFIRKK 768
Query: 437 EV 438
E
Sbjct: 769 EA 770
>gi|336370797|gb|EGN99137.1| hypothetical protein SERLA73DRAFT_54272 [Serpula lacrymans var.
lacrymans S7.3]
Length = 514
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 234/486 (48%), Gaps = 101/486 (20%)
Query: 1 MGISSLFPVQVAVW-----QETIGPGLFE-----RDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ + ++ GL+ RD+C+++PTGSGKTL+Y LPIV+TLS
Sbjct: 80 LGITELFAVQTRLLPFLLPRDARKRGLYAPYAPPRDVCVSAPTGSGKTLAYVLPIVETLS 139
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
+R + LRALVVLPTRDL +QV
Sbjct: 140 SRIITRLRALVVLPTRDLVMQV-------------------------------------- 161
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
++ F + GL VG A GQ S A E S+LI +DIL
Sbjct: 162 -RETFEEVGKGRGLKVGTATGQHSFAHEQSQLIA----------------DRSSGKIDIL 204
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR---------- 220
+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q W+ V+ TR
Sbjct: 205 ICTPGRLVDHMNGTPNFSLQHLRFLVIDEADRLLAQSFQDWVARVVTATRPTTFPSSGTP 264
Query: 221 -SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD-KPYPRLVKMVLSATLTQDPNKLA 278
++ E F A P + I G+ D KP K++ SATL +DP KLA
Sbjct: 265 RAEEEETFGCADGLAPPLLHAKYAIANT---YGYMDEKPSSSCQKLLFSATLPRDPGKLA 321
Query: 279 QLDLHHPLFLTTGETR--------------YKLPERLESYKLICESKLKPLYLVALLQSL 324
L L + + R Y +P L + ++C S KPL L L+Q
Sbjct: 322 GLQLRDVKYFVVQKARGGREEGVLDVVMERYTMPATLREHMIVCASSEKPLVLFDLVQRH 381
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHF-------GELRIKIKEYSGLQRQSVRSKTLKAFRE 377
+VFT S EST RL L F G L + K YS R L+ F+
Sbjct: 382 KVRNGLVFTKSAESTARLVRLFELFEKAVAGEGRLGVVAKAYSSDLSVGERRGILEKFKA 441
Query: 378 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
+IQ+LV SD ++RGMD+ V++VV+YD P ++ Y+HR GRTARAG+ G +TL+ + E
Sbjct: 442 EEIQILVCSDLISRGMDMSHVSHVVSYDVPVDMRKYVHRVGRTARAGREGDAWTLVEEQE 501
Query: 438 VKRFKK 443
V K
Sbjct: 502 VSAVTK 507
>gi|426199228|gb|EKV49153.1| hypothetical protein AGABI2DRAFT_201250 [Agaricus bisporus var.
bisporus H97]
Length = 602
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 242/494 (48%), Gaps = 100/494 (20%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ A+ I + RD+CI++PTGSGKTL+YALPIV+ LS
Sbjct: 129 LGITELFAVQTALLPFLIPSSDVQHQLYLSTRPPRDVCISAPTGSGKTLAYALPIVEILS 188
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
+R + LRAL++LPTRDL + Q
Sbjct: 189 SRVLTQLRALIILPTRDL---------------------------------------VAQ 209
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F + GL +G A GQ S A E S+L+ D L S VDIL
Sbjct: 210 VRETFEVLGKGRGLKIGTATGQHSFAHEQSQLVN----------DQTSSLLGGSSRVDIL 259
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N T FTL+HL +LV+DE DRLL +++Q WL VL R
Sbjct: 260 ICTPGRLIDHMNGTPNFTLQHLRFLVIDEADRLLAQSFQDWLAQVLAALRPHRTPNCVPG 319
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLV------------KMVLSATLTQDPNKLA 278
+ + T+ + R PYP K++ SATLT+DP K+A
Sbjct: 320 TQV--DSIPHPDTVAPYLLHR----LPYPHYPTFLTEVHESSCQKLLFSATLTRDPGKIA 373
Query: 279 QLDLHHPLFLTTGETR---------------YKLPERLESYKLICESKLKPLYLVALLQS 323
L+L P + ++R + +P L+ + L+CES KPL L+
Sbjct: 374 SLELREPKYFIVQKSRESDGQDRILSVVMEKFSIPSTLK-HMLVCESSQKPLMFFHLVFH 432
Query: 324 LGEEKCIVFTSSVESTHRLCTLLNHFGELR-------IKIKEYSGLQRQSVRSKTLKAFR 376
L +VFT S EST RL L + F + R + ++ YS R L+ F+
Sbjct: 433 LNVTDALVFTKSSESTARLVRLFDFFQKWRTAESGKSLVVQAYSSDLSVGERKVILERFK 492
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
+I +L+ SD ++RG+D+ V++VV+YD P ++ Y+HR GRTARAG+ G + L+ +
Sbjct: 493 AQEINILICSDLISRGIDISHVSHVVSYDVPVDMRKYVHRVGRTARAGRSGDAWALVEEQ 552
Query: 437 EVKRFKKLLQKADN 450
E + FK +L+ AD+
Sbjct: 553 EARYFKNMLRDADH 566
>gi|392573109|gb|EIW66250.1| hypothetical protein TREMEDRAFT_35235, partial [Tremella
mesenterica DSM 1558]
Length = 694
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 239/449 (53%), Gaps = 79/449 (17%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D I++PTGSGKTL+YA+PI++ LS R + LRAL+VLPT+DL +QV
Sbjct: 261 DYLISAPTGSGKTLAYAIPIIEILSARTITRLRALIVLPTKDLVVQV------------- 307
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
++ +A L +G GQ S A E L+
Sbjct: 308 --------------------------RETLELLAKGTDLKIGTIGGQHSFAHEQKVLV-- 339
Query: 146 PKLEAGICYDPEDV-LQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
ED+ ++EL S VDIL+ATPGRL+DH++ T FTL+HL +LV+DE DR
Sbjct: 340 -----------EDLEIKELGGSSKVDILIATPGRLIDHLSQTPNFTLQHLRFLVIDEADR 388
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV---ERGFKDKPYP 259
LL ++YQ WL VL+ TR ++N + +P + + CG+ D P
Sbjct: 389 LLNQSYQDWLMMVLRHTRPTDDN-MALEREIMPDDHVAPLWMSACGLGDKSHSLLDPPEQ 447
Query: 260 RLVKMVLSATLTQDPNKLAQLDLHHPLFL------------TTGETRYKLPERLESYKLI 307
+ K++ SATLT+DP K+A L L+ P + + GE ++ +P L + LI
Sbjct: 448 QCQKLLFSATLTRDPAKVASLSLNSPRYYIIQSSLAQPSAHSIGE-QFAIPASLTEFMLI 506
Query: 308 CESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLLNHF----GELRIKIKEYSG 361
+LKPL L+ L+ S ++FT SVES RL LL +F G ++ ++ Y+
Sbjct: 507 LPPQLKPLNLIHLIHSPEYAVSSALIFTKSVESCVRLVKLLEYFEVAFGGGKV-VQGYTS 565
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
R + R K L AF +G +Q+LV SD + RGMD+ V++V++YD P ++ Y+HR GRTA
Sbjct: 566 DMRPAERKKLLAAFGQGDVQLLVCSDLIARGMDLPTVSHVISYDIPLDMRKYVHRVGRTA 625
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
RAG+ G +TL+ K E FK +L+ A +
Sbjct: 626 RAGRSGTAWTLVEKQEALHFKSILKSAGH 654
>gi|409078236|gb|EKM78599.1| hypothetical protein AGABI1DRAFT_74928 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 602
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 243/500 (48%), Gaps = 112/500 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ A+ I + RD+CI++PTGSGKTL+YALPIV+ LS
Sbjct: 129 LGITELFAVQTALLPFLIPSSDVQHQLYLSTRPPRDVCISAPTGSGKTLAYALPIVEILS 188
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
+R + LRAL++LPTRDL + Q
Sbjct: 189 SRILTQLRALIILPTRDL---------------------------------------VAQ 209
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F + GL +G A GQ S A E S+L+ D L S VDIL
Sbjct: 210 VRETFEVLGKGRGLKIGTATGQHSFAHEQSQLVN----------DQTSSLLGGSSKVDIL 259
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL------------ 218
+ TPGRL+DH+N T FTL+HL +LV+DE DRLL +++Q WL VL
Sbjct: 260 ICTPGRLIDHMNGTPNFTLQHLRFLVIDEADRLLAQSFQDWLAQVLTALRPHRTQNCVPG 319
Query: 219 TRSDNENRFSDASTFL------PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 272
TR D+ S +L P L + + K++ SATLT+
Sbjct: 320 TRVDSIPHPDTVSPYLLHRLPFPHYSTFLTEVHESSCQ------------KLLFSATLTR 367
Query: 273 DPNKLAQLDLHHPLFLTTGET---------------RYKLPERLESYKLICESKLKPLYL 317
DP K+A L+L P + ++ ++ +P L+ + L+CES KPL
Sbjct: 368 DPGKIASLELREPKYFIVQKSSESDGQDHILSVVMEKFSIPSTLK-HMLVCESSQKPLMF 426
Query: 318 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-------IKIKEYSGLQRQSVRSK 370
L+ L +VFT S EST RL L + F + R + ++ YS R
Sbjct: 427 FHLVFHLNVTDALVFTKSSESTARLVRLFDFFQKWRAVESGKSLVVQAYSSDLSVGERKV 486
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L+ F+ +I +L+ SD ++RG+D+ V++VV+YD P ++ Y+HR GRTARAG+ G +
Sbjct: 487 ILERFKAQEINILICSDLISRGIDISHVSHVVSYDVPVDMRKYVHRVGRTARAGRSGDAW 546
Query: 431 TLLHKDEVKRFKKLLQKADN 450
L+ + E + FK +L+ AD+
Sbjct: 547 ALVEEQEARYFKNMLRDADH 566
>gi|432947382|ref|XP_004084018.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Oryzias latipes]
Length = 632
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 230/470 (48%), Gaps = 90/470 (19%)
Query: 2 GISSLFPVQVAV---------WQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
G+ FPVQ V +G G F RD+C+++PTGSGKTL++ LP++Q L
Sbjct: 181 GVHHFFPVQAEVIPAILDAAQHGSLLGRGGFRPRDICVSAPTGSGKTLAFVLPVIQVLMT 240
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RAL VLPT++LA QV
Sbjct: 241 RMVCEVRALAVLPTKELAQQVYK------------------------------------- 263
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF A L V + GQ S A E + L ++ G+ +S DI+V
Sbjct: 264 --VFGTYAEGTPLRVLMLAGQKSFAAEQASL---SEIRGGV----------RRSTADIIV 308
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHIN G L+ L +L++DE DR++ +Q+WL V TR+
Sbjct: 309 ATPGRLVDHINKNSGLCLQQLRFLIIDEADRMIDSMHQSWLSLV---TRA---------- 355
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
+ P L + P L K++ SATLTQ+P KL QL LH P ++
Sbjct: 356 VYGPETTKLLGRTEPACITAASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSA 415
Query: 292 ET-------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
+ R+ P+ L Y + C KPL ++ + + + FT+S E+
Sbjct: 416 HSNDPPADATALKPERFDFPQGLTEYYVPCTLSKKPLLILHFILRMKLHPILCFTNSRET 475
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
HRL L+ FG ++ E+S + R +TLK F +GKIQ+L+S+DA RG+D+ GV
Sbjct: 476 AHRLYLLVQLFGG--VQAAEFSSRLSPNERKRTLKEFDQGKIQLLISTDAAARGIDIPGV 533
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
VVNYD P +I+ YIHR GRTARAG+ G FT L + + KRF +++Q+A
Sbjct: 534 KCVVNYDAPQFIRMYIHRVGRTARAGKSGLAFTFLLRVQEKRFLQMVQEA 583
>gi|91092858|ref|XP_969365.1| PREDICTED: similar to ATP-dependent RNA helicase DDX51 [Tribolium
castaneum]
gi|270003080|gb|EEZ99527.1| hypothetical protein TcasGA2_TC000109 [Tribolium castaneum]
Length = 601
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 232/466 (49%), Gaps = 93/466 (19%)
Query: 2 GISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
G+ LFPVQ V W +F RD+C+++PTGSGKTL++ LP+VQTL VR
Sbjct: 149 GVKYLFPVQAEVIPWVLQSRQNADIMFPRDVCVSAPTGSGKTLAFVLPVVQTLKQFTVRK 208
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+RALV+LPT+DLA QV F S F
Sbjct: 209 IRALVILPTQDLAEQV---------------------------FKS------------FK 229
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
+ VGL G+ E +L+ C+ S +DILV T GR
Sbjct: 230 LYTQGTRIEVGLVSGKQMFQAEQKQLV-----YFNECFG-------FVSKIDILVCTAGR 277
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L++H+ +T GF L+ L +L++DE DR+L WL L+ +NR
Sbjct: 278 LVNHLKSTNGFNLQALEFLIIDEADRVLESVQDDWL-YHLEKHIYTIQNR---------- 326
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----- 291
K + C ++R + P+ K++ SATLTQDP K+ +L L P T+
Sbjct: 327 -----KVLNVCTLQR----QRAPQ--KLLFSATLTQDPEKIEKLSLFQPKLFTSSVVENS 375
Query: 292 ----------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 341
+Y P+ L ++C +KPL L A L+ K +VFT SVES HR
Sbjct: 376 NESEEKPMILTGKYTTPKELTEKYIVCSKDVKPLVLYAFLKRENLTKTLVFTHSVESAHR 435
Query: 342 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 401
L LL + R+KI+E S + R + + +F +G++ +L+ +D + RG+D+ GVN V
Sbjct: 436 LKILLKSLFKKRLKIEEISSNLKGKSRDEFISSFTKGEVDLLICTDFLARGIDLPGVNCV 495
Query: 402 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
++Y P Y+KTYIHRAGRTARAG+ G TLLH+++V FK LL+K
Sbjct: 496 ISYSAPKYLKTYIHRAGRTARAGESGLAVTLLHEEQVPAFKTLLKK 541
>gi|260801978|ref|XP_002595871.1| hypothetical protein BRAFLDRAFT_84239 [Branchiostoma floridae]
gi|229281121|gb|EEN51883.1| hypothetical protein BRAFLDRAFT_84239 [Branchiostoma floridae]
Length = 806
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 178/472 (37%), Positives = 242/472 (51%), Gaps = 94/472 (19%)
Query: 2 GISSLFPVQ----VAVWQET-----IG-PGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
G+ +LFPVQ AV ++ +G G D+C+++PTGSGKTL++ +P+VQ L
Sbjct: 325 GVENLFPVQHQVIPAVLEDAEDGTIMGRAGFRPSDICVSAPTGSGKTLAFVIPVVQALLQ 384
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT+DLA+Q+
Sbjct: 385 RVVCEVRALVVLPTKDLAVQIYK------------------------------------- 407
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF L V GQ S+A E + L+K E+ Y QS DI+V
Sbjct: 408 --VFNHYTSGSRLKVANCSGQKSLAAERNALVK----ESHGVY---------QSLADIVV 452
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS-DA 230
ATPGRL+DHI T GF L HL YLV+DE DR+L + Q WL V TR+ E + S +
Sbjct: 453 ATPGRLVDHIEKTPGFNLRHLRYLVIDEADRMLDQIKQDWLAKV---TRAVYEGQGSTEE 509
Query: 231 STFLP-----------SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 279
LP +A G L + Y L K++ SATL+Q+P KL Q
Sbjct: 510 KPGLPMMLWAGVLGGRTAPGPLTAANAARM--------YQPLQKLLFSATLSQNPEKLQQ 561
Query: 280 LDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK---CIVFTSSV 336
L+L HP T+ R+K +R + S+ K ++ G +K + FT S+
Sbjct: 562 LNLFHPRLFTSV-VRHK--QRKQETASAGSSEEKGTFVGKFTTPAGLQKFQHVLCFTGSL 618
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
ESTHRL L FG + + E+S R+K L FR GKIQ++V SDAM RGMDVE
Sbjct: 619 ESTHRLYLLAKLFG--GVTVAEFSSNLPPDRRTKILTKFRTGKIQLIVCSDAMARGMDVE 676
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
GV V++YD P Y+KTYIHR GRTARAG+ GR F+L+ ++E + ++ LQ+A
Sbjct: 677 GVEVVISYDVPPYVKTYIHRVGRTARAGKEGRAFSLVLQEE-EFLQEFLQEA 727
>gi|353239546|emb|CCA71453.1| related to DBP6-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 1596
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 239/492 (48%), Gaps = 93/492 (18%)
Query: 1 MGISSLFPVQVAVW--------QETI--GPGLFERDLCINSPTGSGKTLSYALPIVQTLS 50
+GI LF VQ + ++++ P RD+C ++PTGSGKTL+YA+PI + LS
Sbjct: 1114 LGIKELFAVQTVLLPFLLPEDLEQSMLYQPSHPPRDVCASAPTGSGKTLAYAIPITEMLS 1173
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R V LRALVV+PTRDL VQ Q
Sbjct: 1174 TRIVTRLRALVVVPTRDL-----------------------------VQ----------Q 1194
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F A L +G+A GQ S A E +A I D + +S VDIL
Sbjct: 1195 VRETFEACGKGTKLQIGIATGQHSFAHE----------QAQIVGDISERSLGGRSRVDIL 1244
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR--SDNENRFS 228
+ TPGRL+DHIN T FTL+HL +LV+DE DRLL +++Q WL VL S N R S
Sbjct: 1245 ICTPGRLIDHINGTPNFTLQHLRFLVIDEADRLLNQSFQEWLKQVLNAISLPSPNGPRLS 1304
Query: 229 --DASTFLPSAFGSLKTIRRCGVERGFKD---KPYPRLVKMVLSATLTQDPNKLAQLDLH 283
D S P G T V D P K++ SATLT+DP K+ +L L
Sbjct: 1305 EGDRSELFPVPDGIAPTWLSALVPTSPTDIDEAPRSSCQKLLFSATLTRDPAKIVELQLR 1364
Query: 284 HPLFL------------------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 325
P + T ++ P L + ++CES KPL L L
Sbjct: 1365 DPKYFIVKGISASQEVGDAMDVNVTHVESFETPGTLREWMIVCESINKPLLLFYLAHKQQ 1424
Query: 326 EEKCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAFR 376
+VFT S EST RL LL +F G +I + +S S R L+ F+
Sbjct: 1425 ISDMLVFTKSAESTTRLLRLLGYFEDAMAEREVGSKKIIAEAFSSDLAPSQRKTVLEKFK 1484
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
+I +L+ SD ++RG+D+ V++VVNYD P ++ YIHR GRTARAG+ G ++L+ +
Sbjct: 1485 AKQIDMLICSDLVSRGIDIPHVSHVVNYDIPVDVRKYIHRVGRTARAGREGDAWSLVEEQ 1544
Query: 437 EVKRFKKLLQKA 448
E+ FK ++++A
Sbjct: 1545 EMHHFKLMMKEA 1556
>gi|301604620|ref|XP_002931939.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Xenopus (Silurana)
tropicalis]
Length = 660
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 236/477 (49%), Gaps = 99/477 (20%)
Query: 3 ISSLFPVQV----AVWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNR 52
+ LFPVQ A+ T +G G + D+C+++PTGSGKTL++ +PIVQ L R
Sbjct: 210 VKYLFPVQAEVIPAILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQR 269
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RALVVLPT++LA QV CK
Sbjct: 270 VVCEVRALVVLPTKELAQQV--------CK------------------------------ 291
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
VF +GL V + GQ S E LI + G C S DILV
Sbjct: 292 -VFNTYVDGMGLKVVMVTGQKSFLKEQESLIHKTAF--GFC-----------SLADILVC 337
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP----TVLQLTRSDNENRFS 228
TPGRL+DHI T GF L HL +LV+DE DR++ Q WL V Q+ +D+ N
Sbjct: 338 TPGRLVDHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVV-ADSPNML- 395
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
F G L C P L K++ SATLTQ+P KL QL L+ P
Sbjct: 396 ----FTRKEPGILTAASSC--------LPQTPLQKLLFSATLTQNPEKLKQLGLYQPRLF 443
Query: 289 TT---------GETR--------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 331
T+ ET+ + LPE L Y + C KPL L+ L SL + +
Sbjct: 444 TSKQKGTSDDSSETQMESSTSGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLRFSRVLC 503
Query: 332 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 391
FT+S +++HRL L+ FG I + E+S R KTLK F +GK+Q+L+S+DA R
Sbjct: 504 FTNSRDASHRLYLLVRSFG--GISVAEFSSRLSPGERKKTLKEFEQGKVQLLISTDATAR 561
Query: 392 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
G+D++GV V+NYD P +I+TY+HR GRTARAG+ G FT+L K + + +L+ A
Sbjct: 562 GIDIKGVKCVINYDAPQFIRTYVHRVGRTARAGKAGLAFTMLLKVQENPYFSMLRDA 618
>gi|281209875|gb|EFA84043.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 559
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 229/451 (50%), Gaps = 78/451 (17%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+C+ +PTGSGKTL+Y LPIVQ L NR VR LR + ++PT DL Q +
Sbjct: 77 DICVCAPTGSGKTLAYVLPIVQKLYNRVVRRLRVICIVPTHDLVTQTEAT---------- 126
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
F +I L V +G S A E S ++
Sbjct: 127 -----------------------------FKSITKGTDLVVE-TLGLRSFALEQSLIVSS 156
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
++ E+ QS VDI+V TPGRL++H+N T GF L+HL YLV+DE DRLLR
Sbjct: 157 H-------FNDENNSVTYQSLVDIIVCTPGRLVEHLNETPGFDLQHLTYLVIDEADRLLR 209
Query: 206 EAYQAWLPTVLQLTRSDNENRFS---------DASTFLPSAFGSLKTIRRCGVERGFKDK 256
E++Q WL V+ + E S S + ++ G R FK+
Sbjct: 210 ESFQYWLEKVMDSSSVSKERLISIGSRGDISISDSKYNNTSSGGSSNFRSHIDHLSFKE- 268
Query: 257 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG---ETRYKLPERLESYKLICESKLK 313
R++K++LSAT++ +P K++ L L+ PL+ + E +Y +P+ L+ + C S K
Sbjct: 269 --SRVIKLLLSATMSYNPEKISLLKLNAPLYFQSNKISELKYTIPDTLKESYIACHSDQK 326
Query: 314 PLYLVALLQSLGEEK-------------CIVFTSSVESTHRLCTLLNHFGEL---RIKIK 357
PL L++++ ++ + K I FT+S++ T RL TLL GE+ ++K
Sbjct: 327 PLALISVIGNIFKSKQQQQTDQNDNIARIICFTNSIDITQRLNTLLGFIGEVDGVKLKPA 386
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
+YS RS LK F G I VL+ SD + RGMD+ V+ V+NY+ P Y+HR
Sbjct: 387 QYSSSINSIERSNLLKLFANGDINVLICSDILARGMDLPNVDAVINYNAPPSAVLYVHRV 446
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
GRTARAG+ G +T++ ++E F +++KA
Sbjct: 447 GRTARAGRKGSAYTIVAREEKSYFTNMIKKA 477
>gi|294464732|gb|ADE77873.1| unknown [Picea sitchensis]
Length = 230
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 171/263 (65%), Gaps = 44/263 (16%)
Query: 49 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 108
LS R ++ LRALVVLPTRDLA+QV
Sbjct: 2 LSRRTLQYLRALVVLPTRDLAIQV------------------------------------ 25
Query: 109 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV-LQELQSAV 167
K VF AIAPAVGLSVGLAVGQ+S+A + ++ I+ + DP+ + + +S+V
Sbjct: 26 ---KTVFDAIAPAVGLSVGLAVGQTSVAADTAQFIRHRRNSMQNLSDPKGMEMSTSESSV 82
Query: 168 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD-NENR 226
DIL+ATPGRLMDHI++TRGFTLEHLCYLVVDETDRLLREAYQ WLP VL +S+ +ENR
Sbjct: 83 DILIATPGRLMDHISSTRGFTLEHLCYLVVDETDRLLREAYQYWLPNVLSTAQSNHHENR 142
Query: 227 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 286
+ S+ + + G + T RR + RGFK K PR++KM+LSATLT+DP+KL+QL LH PL
Sbjct: 143 GATWSS-VSARLGPITTFRRDVLGRGFKTKTDPRVMKMILSATLTRDPSKLSQLALHQPL 201
Query: 287 FL--TTGETRYKLPERLESYKLI 307
FL T E RYKLPE+LE Y L+
Sbjct: 202 FLASTGAEKRYKLPEQLEIYTLV 224
>gi|358055147|dbj|GAA98916.1| hypothetical protein E5Q_05604 [Mixia osmundae IAM 14324]
Length = 2128
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 232/483 (48%), Gaps = 85/483 (17%)
Query: 2 GISSLFPVQVAVWQETIG--------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 53
G+ +LF VQ+A Q +G P RDLC+N+PTGSGKTL+Y LPIVQ LS
Sbjct: 322 GLETLFAVQMATCQHILGTEQTRSLYPRYPPRDLCVNAPTGSGKTLAYVLPIVQMLSTTI 381
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RAL++LPTRDL + QVKD
Sbjct: 382 VTRMRALIILPTRDL---------------------------------------VTQVKD 402
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
F L +G A G S E +A + D S VDIL+AT
Sbjct: 403 TFEIYCKGTSLRIGTATGSQSFKKE----------QAILVGDSAHYYPGGSSKVDILIAT 452
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + +L+HL +LV+DE DRLL +++Q WL V R S+ +
Sbjct: 453 PGRLIDHLTQSPNLSLQHLRFLVMDEADRLLNQSFQDWLQVVQAHLRYPPPT--SEDAAE 510
Query: 234 LPSAFGSLKTIRRCGVERG---FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
LP A + +++ + P L +++ SATL++DP +++ L+L +P+F+
Sbjct: 511 LPLAGDASAAPHVLALQQATTSMSETPIQPLQQILCSATLSRDPRQVSALNLRNPVFVAV 570
Query: 291 GETR------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
E R + LP L+ + L+ S KPL L LL + + FT SVES
Sbjct: 571 REARDDQMDELETEDNFALPATLKEHMLVTSSGSKPLMLFYLLHAKSLSNVLCFTKSVES 630
Query: 339 THRLCTLLNHF-----------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
RL L+ F K+KE+SG R K L AF G+I +L+ SD
Sbjct: 631 AQRLAKLVELFETEYASRSEGADNQGFKVKEFSGSLPVPQRKKILAAFVAGEIDMLICSD 690
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
+ RG+D+ V +V++YD P ++ Y+HR GRTARAG+ G ++L+ E FK LL
Sbjct: 691 IIARGIDLPSVAHVISYDVPVDMRKYVHRVGRTARAGRPGDAWSLVESQEANFFKALLTD 750
Query: 448 ADN 450
A +
Sbjct: 751 AQH 753
>gi|390594629|gb|EIN04039.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 636
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 243/516 (47%), Gaps = 115/516 (22%)
Query: 1 MGISSLFPVQVAV----------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 50
+GI LF VQ A+ + P RD C+++PTGSGKTL+Y +PIV+ L+
Sbjct: 134 LGIGELFAVQTALLPFLLPSSPAQRALYMPYDPPRDACVSAPTGSGKTLAYVIPIVEVLA 193
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
+R V LRALVVLPTRDL + Q
Sbjct: 194 SRIVTRLRALVVLPTRDL---------------------------------------VAQ 214
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F A+ GL + A GQ S A E ++L+ D L S VD+L
Sbjct: 215 VRETFEAVGKGRGLKIATATGQHSFAHEQTQLMA----------DRSKPLLGGSSKVDVL 264
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+ T FTL+HL +LV+DE DRLL + +Q WL VL TR + + A
Sbjct: 265 ICTPGRLIDHLEGTPNFTLQHLRFLVIDEADRLLAQLFQDWLAKVLAATRPPSSLSSAFA 324
Query: 231 -----------STFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNK 276
+ L AF SL + G+ F + K++ SATLT+DP K
Sbjct: 325 LSSPSSSVVPHADALAPAFASLLGLSPSSPSGLLTEFDEPKASSCQKLLFSATLTRDPGK 384
Query: 277 LAQLDLHHP-LFLTTGE-------------------------TRYKLPERLESYKLICES 310
LA L L P F+ GE ++ +PE LE + L+ +
Sbjct: 385 LAALALREPRYFVVAGERKRAQGAEEREEEAGKMDGVVDFVMEKFSVPETLEEHYLVTSA 444
Query: 311 KLKPLYLVALLQSLG----EEKCIVFTSSVESTHRLCTLLNHF------------GELRI 354
KPL L+ L+ + G +VF S E+ RL + F G R+
Sbjct: 445 AQKPLALMYLVHARGVGADSGGVLVFAKSAEAVARLVKFVEFFEEARVDALPADTGRRRV 504
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+K YS R L+ F+ KI +LV SD + RGMD+ V +VV+YD P ++ Y+
Sbjct: 505 SVKAYSSDLAPGERRAILEGFKARKIDMLVCSDLVARGMDISHVEHVVSYDAPVDVRKYV 564
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
HR GRTARAG+ G ++L+ + E + FK++L++AD+
Sbjct: 565 HRVGRTARAGRKGCAWSLVEEQEARWFKEMLREADH 600
>gi|195127527|ref|XP_002008220.1| GI11933 [Drosophila mojavensis]
gi|193919829|gb|EDW18696.1| GI11933 [Drosophila mojavensis]
Length = 670
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/474 (35%), Positives = 236/474 (49%), Gaps = 96/474 (20%)
Query: 1 MGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ AV W + P F RD+C+++PTGSGKTL++A+PIVQ L+ R V+
Sbjct: 161 MKIKRLFPVQTAVIPWILEAQAKPEPFRPRDICVSAPTGSGKTLAFAIPIVQLLAKR-VQ 219
Query: 56 C-LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
C +RALVVLP +LALQV V
Sbjct: 220 CKVRALVVLPVAELALQVYK---------------------------------------V 240
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
F+A+ L V L Q + DE +L+++ K G+ Y S VDI+V TP
Sbjct: 241 FSALCSLTELEVCLLSKQHRLEDEQDKLVEQYK---GVYY----------SKVDIVVTTP 287
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + RS + +
Sbjct: 288 GRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDAHVRSTADQLLTGVQA-- 345
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET- 293
P + L + +P+ K++ SATL+QDP KL L L P TT T
Sbjct: 346 PLCYQELLN--------SWGKQPH----KLLFSATLSQDPEKLQNLRLFQPKLFTTTLTM 393
Query: 294 ---------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
+Y P L + E +LKPL L A++ ++ + F
Sbjct: 394 PVLQPALDNGELPDQTSTFIGKYTTPAELTEQYCVTEMRLKPLTLYAMVLLNNWKRFLCF 453
Query: 333 TSSVESTHRL-CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 391
T+S ++ +RL C L++ F + I++KE S + R L F G I LV SDA+ R
Sbjct: 454 TNSADTANRLACVLVHLFKDSTIRVKELSAKMSATKRGHRLSEFARGNIHGLVCSDALAR 513
Query: 392 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
G+DV V+ VV+Y+ P +IKTYIHR GRTARAGQ G TLL + FKK+L
Sbjct: 514 GIDVPNVDVVVSYEAPRHIKTYIHRVGRTARAGQKGTAITLLTDKDQANFKKML 567
>gi|195014606|ref|XP_001984044.1| GH15223 [Drosophila grimshawi]
gi|193897526|gb|EDV96392.1| GH15223 [Drosophila grimshawi]
Length = 675
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 235/473 (49%), Gaps = 94/473 (19%)
Query: 1 MGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ AV W + P F RD+C+++PTGSGKTL++A+PIVQ L+NR
Sbjct: 158 MKIERLFPVQRAVIPWILEAQSKPAPFRPRDICVSAPTGSGKTLAFAIPIVQLLANRVEC 217
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV VF
Sbjct: 218 KVRALVVLPVAELALQVYK---------------------------------------VF 238
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
+ + L V L Q + DE +L+++ K G+ Y S VDI+V TPG
Sbjct: 239 SVLCSKTELEVCLLSKQHRLEDEQEKLLEQYK---GVYY----------SKVDIVVTTPG 285
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH++AT GF L+ L +LV+DE DR++ +Q WL + R+ + + P
Sbjct: 286 RLVDHLHATEGFCLKSLQFLVIDEADRIMDAVFQNWLYHLDSHVRTTADQLLTGVQA--P 343
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
+ L + +P+ K++ SATL+QDP KL L L P TT T
Sbjct: 344 LCYQELLN--------SYGKQPH----KLLFSATLSQDPEKLQNLRLFQPKLFTTVFTLP 391
Query: 294 --------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
+Y P L + E +LKPL L ++Q+ G ++ + FT
Sbjct: 392 VLPSALDIAELPEQSSQFIGKYTTPTELTEQYCVTELRLKPLTLYTMVQTYGWKRFLCFT 451
Query: 334 SSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
+S ++ RL +L H F I ++E S + VR++ L F +G I LV SDA+ RG
Sbjct: 452 NSADTADRLAFVLKHLFQGSPITVEELSANMKVGVRARRLADFAKGSIHGLVCSDALARG 511
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
+DV V+ V++Y+ P +IKTYIHR GRTARAGQ G TLL + + FKK+L
Sbjct: 512 IDVPNVDIVLSYEAPRHIKTYIHRVGRTARAGQKGTAITLLTEKDQAPFKKML 564
>gi|389750259|gb|EIM91430.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 725
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/508 (32%), Positives = 234/508 (46%), Gaps = 130/508 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER----------DLCINSPTGSGKTLSYALPIVQTLS 50
+GI LF VQ + + G F+R D+C+++PTGSGKTL+Y LPI++ LS
Sbjct: 263 LGIEELFAVQTTLLPLLLPSGPFKRSLYLPYDPPQDICVSAPTGSGKTLAYVLPIIEILS 322
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R V LRAL+VLPTRDL + Q
Sbjct: 323 ARIVTRLRALIVLPTRDL---------------------------------------VTQ 343
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F AI GL +G A GQ S A E ++L V + VD+L
Sbjct: 344 VRETFEAIGKGRGLKIGTATGQHSFAHEQNQL----------------VADKSAHKVDVL 387
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q WL VL TR
Sbjct: 388 ICTPGRLIDHLNGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQVLAATRP------PPV 441
Query: 231 STFLPSA----FGSLKTIRRCGVERGFKDKPYPRLV-----------------------K 263
T PSA GS + G++ + D P + K
Sbjct: 442 PTHDPSAPASTSGSFTVPQDNGIDIPYPDALSPSFLHLLRPPSFAMITDIDTPRESSCQK 501
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFL-----TTGE-------TRYKLPERLESYKLICESK 311
++ SATL DP K+ L+L ++ GE R+ +P L + L+ S
Sbjct: 502 LLFSATLMSDPGKIKALELRDAKYIVVQGQANGEGVLGVVMERFSMPATLTEHMLVVPSS 561
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK---------------- 355
KPL L L+ + + +VFT S EST RL L F RI+
Sbjct: 562 QKPLMLFHLVHAHNVKNALVFTKSAESTGRLVRLFQFFERARIQAQSQSSMDVDRSGQDA 621
Query: 356 ----IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+K YS + R L+ R+G + +LV SD ++RG+D+ V +VV+YD P I+
Sbjct: 622 REVVVKAYSSDLGAAERRGLLEKLRDGTVDILVCSDLVSRGIDISIVQHVVSYDAPVDIR 681
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVK 439
Y+HR GRTARAG+ G +TL+ + EV+
Sbjct: 682 KYVHRVGRTARAGRDGDAWTLVEEQEVR 709
>gi|189217546|ref|NP_001121235.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Xenopus laevis]
gi|169642008|gb|AAI60740.1| LOC100158308 protein [Xenopus laevis]
Length = 678
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 234/476 (49%), Gaps = 97/476 (20%)
Query: 3 ISSLFPVQVAVWQETI---------GPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNR 52
+ FPVQ V + G G + D+C+++PTGSGKTL++ +PIVQTL R
Sbjct: 228 VKDFFPVQAEVIPAVLDSSCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQTLLQR 287
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RALVVLPT++LA QV CK
Sbjct: 288 VVCEVRALVVLPTKELAQQV--------CK------------------------------ 309
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
VF +GL V + GQ S E LI++ S DILV
Sbjct: 310 -VFNTYVDGMGLKVVMIAGQKSFLKEQESLIQKTAFG-------------FSSLADILVC 355
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DHI T GF L HL +LV+DE DR++ Q WL V + R S
Sbjct: 356 TPGRLVDHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLNHVTKAVF-----RLEAGSP 410
Query: 233 ---FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFL 288
F G L C P L K++ SATLTQ+P KL QL L+ P LF+
Sbjct: 411 NMLFTRKEPGILTAASSC-----LHQTP---LQKLLFSATLTQNPEKLKQLGLYQPRLFI 462
Query: 289 T--------TGETR--------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
+ + ET+ + LPE L Y + C KPL L+ L SL + + F
Sbjct: 463 SKQKGNPNDSSETQMEPSISGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLRFSRVLCF 522
Query: 333 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
T+S +++HRL L+ FG I + E+S R +TLK F +GK+Q+LVS+DA RG
Sbjct: 523 TNSRDASHRLYLLIRSFG--GIDVAEFSSRLSPGERKRTLKEFEQGKVQLLVSTDATARG 580
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+D++GV ++NYD P +I+TY+HR GRTARAG+ G FT+L K + K + +L+ A
Sbjct: 581 IDIKGVKCIINYDAPQFIRTYVHRVGRTARAGKAGLAFTMLLKVQEKPYFGMLRDA 636
>gi|325188363|emb|CCA22900.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 496
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 244/470 (51%), Gaps = 89/470 (18%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D CI++PTGSGKT +Y +PI+ L R + LRAL+V+PTRDLA QV
Sbjct: 61 DFCISAPTGSGKTFTYLIPILLQLQQRIICRLRALIVVPTRDLATQV------------- 107
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
H +A + + L + GQ++ E
Sbjct: 108 -----HQVA---------------------SVLCGGTKLKCAVVTGQANFGQE------- 134
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
+ +L + S +DIL+ATPGRL+DH+ T GFTL+HL +L+VDE DRLL
Sbjct: 135 -----------QRLLSDTHSGIDILIATPGRLVDHLEQTNGFTLQHLQFLIVDEADRLLT 183
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL--VK 263
++YQ W+ V Q + +S S +L IR G ++ R+ ++
Sbjct: 184 QSYQDWIAKVYQ-------SVYSTVSAVPLRPEDNLVAIRTIRTANGIQNHKQIRVPFIR 236
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFL----TTGE---------------TRYKLPERLESY 304
++LSATLT++P+KLA + +H+ L + GE + Y+ PE+LE +
Sbjct: 237 VLLSATLTENPSKLALIGMHYARVLKIKGSEGEDSMPKAQTECELDADSVYETPEKLEEW 296
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN----HFGELRIKIKEYS 360
+ C+S KPL L+ LL + ++ ++FTSSV +THRL LL + + ++EYS
Sbjct: 297 MIECDSDSKPLRLIQLLLTFKDQMTLIFTSSVNATHRLTRLLQLVFKEHSDDDVGVQEYS 356
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
R + ++G ++LV SDAM RGMD++ V NV+NYD P++IKTYIHRAGR
Sbjct: 357 SSLTLQQRRTLVAKCKKGLYRILVCSDAMARGMDLDDVVNVINYDVPSFIKTYIHRAGRA 416
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
ARAG+ GRC TL+ + + K +++LQKA +P I+ L PVY
Sbjct: 417 ARAGRFGRCVTLVKRGQTKGLQRMLQKAKKKKLLAFPLPPEEIQQLVPVY 466
>gi|170098937|ref|XP_001880687.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644212|gb|EDR08462.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 510
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 238/479 (49%), Gaps = 99/479 (20%)
Query: 1 MGISSLFPVQVAVW-----QETIGPGLF-----ERDLCINSPTGSGKTLSYALPIVQTLS 50
+GI+ LF VQ ++ + + L+ RD+CI++PTGSGKTL+Y LPIV+TLS
Sbjct: 80 IGITELFAVQTSLLPFLLPHDPLARRLYLPYDPPRDVCISAPTGSGKTLAYVLPIVETLS 139
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R V LRALVVLPTRDL + Q
Sbjct: 140 PRIVTRLRALVVLPTRDL---------------------------------------VSQ 160
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V++ F AI GL +G A GQ+S A E ++L+ L S VDIL
Sbjct: 161 VRETFEAITNNRGLKIGTATGQNSFAHEQAQLVN----------------NVLPSKVDIL 204
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRLMDH+ T F+L+HL +LV+DE DRLL +++Q WL VL TR ++ S +
Sbjct: 205 ICTPGRLMDHLMGTPNFSLQHLRFLVIDEADRLLAQSFQDWLSRVLAATRPHVKSSSSSS 264
Query: 231 STF---------LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 281
S L AF L+ + + ++ K++ SATLT+DP K+A L+
Sbjct: 265 SPSPHSLPESDGLSPAF--LQRLSLPDIPAFQHEEKETSCQKLLFSATLTRDPAKIAALN 322
Query: 282 LHHPLFL-----TTGET-----RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 331
L P + T GE Y +P L ++ ++ S KPL L+ +V
Sbjct: 323 LRDPKYFIVQSRTDGEELHVLENYSMPPTL-THMIVSNSSKKPLVFFHLIHRQKMRNVLV 381
Query: 332 FTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQRQSVRSKTLKAFREGK 379
FT S +ST RL L F E R++ + YS S R L F+ +
Sbjct: 382 FTKSADSTTRLVRLFEFFEEARLEKEPGTAGEESIIARAYSSDLPPSERKAILDQFKAQQ 441
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
I +L+ SD ++RG+D+ V++VVNYD P ++ Y+HR GRTARAG+ G +TL+ + EV
Sbjct: 442 IHILICSDLISRGIDITHVSHVVNYDVPVDMRKYVHRVGRTARAGRAGDAWTLVEEQEV 500
>gi|194750630|ref|XP_001957633.1| GF10505 [Drosophila ananassae]
gi|190624915|gb|EDV40439.1| GF10505 [Drosophila ananassae]
Length = 683
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 237/473 (50%), Gaps = 94/473 (19%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W ++ P RD+C+++PTGSGKTL++A+PIVQ L+NR
Sbjct: 156 MKIKRLFPVQREVIPWILEAQSKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLANRVEC 215
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV V
Sbjct: 216 KIRALVVLPVAELALQVYQ---------------------------------------VI 236
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
+A+ L V L Q + DE +L++ L G Y S VDI+V TPG
Sbjct: 237 SALCNKTELEVCLLSKQHKLEDEQEKLVE---LYKGKYY----------SKVDIVVTTPG 283
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH++AT+GF L++L +L++DE DR++ +Q WL + + + A T P
Sbjct: 284 RLVDHLHATKGFCLKNLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 341
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT----- 289
+ L++ F ++P+ K++ SATL+QDP KL L L P LF T
Sbjct: 342 LCYAELQS--------SFGNQPH----KLLFSATLSQDPEKLQNLRLFQPRLFTTVMPVL 389
Query: 290 ---TGET-------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
TGE +Y P L I E +LKPL L AL++ ++ + FT
Sbjct: 390 REPTGEEGDAEADTDGQFLGKYTTPAELTEQICITEMRLKPLTLYALVEKYKWKRFLCFT 449
Query: 334 SSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
+S + RL ++ F K+ E SG VR + LK+F GKI L+ SDA+ RG
Sbjct: 450 NSTDQASRLAFVMATLFENSETKVAELSGNLSALVRKQNLKSFANGKINGLICSDALARG 509
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
+DV ++ V++Y+ P +IKT+IHR GRTARAG+ G TLL + + FKK+L
Sbjct: 510 IDVADIDVVLSYEAPRHIKTHIHRVGRTARAGRKGTAVTLLTEQDQAAFKKML 562
>gi|195428034|ref|XP_002062080.1| GK17342 [Drosophila willistoni]
gi|194158165|gb|EDW73066.1| GK17342 [Drosophila willistoni]
Length = 681
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 232/471 (49%), Gaps = 92/471 (19%)
Query: 1 MGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I FPVQ AV W + P F RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 158 MKIKRPFPVQRAVIPWILEAHAKPEPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVEC 217
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV C K
Sbjct: 218 KVRALVVLPVAELALQVYKVISSLCSK--------------------------------- 244
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L V L Q + DE +L++ L G Y S VDI+V TPG
Sbjct: 245 ------TELEVCLLSKQHRLEDEQEKLLE---LYKGKYY----------SKVDIVVTTPG 285
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + R + S T P
Sbjct: 286 RLVDHLHATKGFCLKSLQFLVIDEADRIMDAVFQNWLYHLDTHVRETTDQLLS--GTQAP 343
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----- 290
+ L + F +P+ K++ SATL+QDP KL L L P TT
Sbjct: 344 LCYAELLS--------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQPKLFTTVLNLP 391
Query: 291 ------GET---------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 335
G+T +Y P L + E +LKPL L AL+Q ++ + F++S
Sbjct: 392 VFQLNEGKTDSVQDQIVGKYTTPAELTEQYCVTEMRLKPLTLFALIQQYKWKRFLCFSNS 451
Query: 336 VESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
++ +RL +L F I ++E SG RS TL F GKI L+ SDA+ RG+D
Sbjct: 452 ADTANRLAFVLKILFQSYDITVEELSGNMSALERSTTLNNFARGKINGLICSDALARGID 511
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
V V+ V++Y+ +IKTYIHR GRTARAG+LG TLL ++ +FKK+L
Sbjct: 512 VADVDIVISYEAARHIKTYIHRVGRTARAGKLGTAVTLLSDQDLDQFKKML 562
>gi|303273266|ref|XP_003055994.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462078|gb|EEH59370.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 526
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 236/465 (50%), Gaps = 60/465 (12%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-AVRCLRAL 60
G+ + VQ A W T G F+ D+C+ PTGSGKTL+YALP++Q L++R +R RAL
Sbjct: 36 GLDQVLTVQSATWLATGGGMCFDCDICVRGPTGSGKTLAYALPLLQALASRPGLREQRAL 95
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIAD---HSIAEMCVQFDSLLFISLPQV-KDVFA 116
+V+PT DLA QV+ C + GL + + C+ D L +L + + A
Sbjct: 96 IVIPTLDLATQVSQLLSPLC--DATGLTVGVPLRTHQDKCL-VDRLTLENLATLNRPSHA 152
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD---PEDVLQELQSAVDILVAT 173
A+ I + I R ++ + P D E + D++VAT
Sbjct: 153 AL----------------ILQPVDHKIVRARIRQATDFSNAIPLDSASEER--FDVMVAT 194
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+ H+ L L +LV+DE DR+LR++YQ + +
Sbjct: 195 PGRLVAHVKEVYYQLLSGLEFLVIDEADRVLRQSYQGCI-------------------SL 235
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-- 291
+ S G+ R G + RL K+++SATLT D + A L L+ P + +
Sbjct: 236 IDSGVGA----RSPHTGNGDRSVSSRRLRKLLISATLTHDSVRFAHLHLNSPRVIQSSAY 291
Query: 292 ------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
+++Y +P L+ ++ E+ KPL L ALL+ +G IVFTSSV THRL L
Sbjct: 292 ESDSLCDSQYVIPSDLDENFIVTEAIKKPLALCALLKRIGRVPVIVFTSSVAITHRLFLL 351
Query: 346 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 405
L+ L EYS Q VRS L +FR G Q+LV+SDA TRG+D++ V V++YD
Sbjct: 352 LDSIKGLPSSAVEYSSSFSQGVRSAALDSFRSGSKQLLVASDAATRGLDIKHVAAVISYD 411
Query: 406 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
P + TYIHR GRTARAGQ G +T+ E +RF+ +L K D
Sbjct: 412 VPLHQNTYIHRVGRTARAGQKGTAYTICRSSETQRFRNILTKVDG 456
>gi|330793373|ref|XP_003284759.1| hypothetical protein DICPUDRAFT_148567 [Dictyostelium purpureum]
gi|325085359|gb|EGC38768.1| hypothetical protein DICPUDRAFT_148567 [Dictyostelium purpureum]
Length = 565
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 250/470 (53%), Gaps = 75/470 (15%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE---RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 57
+ ++ LFPVQ + I P + D+C+ +PTGSGKTL+YA+P+VQ + R VR +
Sbjct: 27 ISVTGLFPVQ-----QEIVPFISRAEGHDICVCAPTGSGKTLAYAIPLVQKIVKRVVRRI 81
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
R +V++PT DL +QV + F +
Sbjct: 82 RVVVIVPTHDLVIQV---------------------------------------EKTFQS 102
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
I L V ++G E L+K Y +S VDI+V+TPGRL
Sbjct: 103 IIKGTDLIVQ-SLGVKPFHVEQKLLVKNHSYGEHALY---------ESLVDIIVSTPGRL 152
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP-S 236
+DHIN T+GFTL++L YLV+DE DRLLR+++Q WL V+ T + N + + + F+ +
Sbjct: 153 VDHINETQGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNNLNNDIGNSNNNFIKYN 212
Query: 237 AFGSLKT-------IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
G+++ IR + +LVK++LSAT+T +P+K++ L L+ PLF T
Sbjct: 213 EKGNIEINELPINIIRDNNNQENHLCWSEFKLVKLLLSATMTYNPSKISLLQLNAPLFFT 272
Query: 290 TGETR---YKLPERLESYKLICESKLKPLYLVAL----LQSLGEEKCIVFTSSVESTHRL 342
T +T+ Y +P L+ +I KPL L+ + L++ +K I FT SV+ THRL
Sbjct: 273 TSKTKEIKYTMPSTLKESYIITNPDQKPLVLLNIIYETLKNDSNKKIICFTKSVDITHRL 332
Query: 343 CTLLNHFG---ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
+LL G ++ +EYS + RS L F+ +I VL+ SD M+RGMD+ ++
Sbjct: 333 NSLLKLIGSVDNIKFTCEEYSSALSTTERSSLLNRFKSNEINVLICSDIMSRGMDISDID 392
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
V+NY+ P I Y+HR GRTARAG+ G +T++ K E++ + +++KA+
Sbjct: 393 VVINYNSPPNITLYVHRVGRTARAGKHGFSYTIIDKQEIRYYISMMKKAE 442
>gi|161611979|gb|AAI55869.1| LOC100135117 protein [Xenopus (Silurana) tropicalis]
Length = 644
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 232/476 (48%), Gaps = 104/476 (21%)
Query: 3 ISSLFPVQV----AVWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNR 52
+ LFPVQ A+ T +G G + D+C+++PTGSGKTL++ +PIVQ L R
Sbjct: 201 VKYLFPVQAEVIPAILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQR 260
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RALVVLPT++LA QV CK
Sbjct: 261 VVCEVRALVVLPTKELAQQV--------CK------------------------------ 282
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
VF +GL V + GQ S E LI + G C S DILV
Sbjct: 283 -VFNTYVDGMGLKVVMVTGQKSFLKEQESLIHKTAF--GFC-----------SLADILVC 328
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT---RSDNENRFSD 229
TPGRL+DHI T GF L HL +LV+DE DR++ Q WL V + +D+ N
Sbjct: 329 TPGRLVDHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVVADSPNML-- 386
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
F G L C P L K++ SATLTQ+P KL QL L+ P T
Sbjct: 387 ---FTRKEPGILTAASSC--------LPQTPLQKLLFSATLTQNPEKLKQLGLYQPRLFT 435
Query: 290 T---------GETR--------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 332
+ ET+ + LPE L Y + C KPL L+ L SL + + F
Sbjct: 436 SKQKGTSDDSSETQMESSTSGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLRFSRVLCF 495
Query: 333 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 392
T+S +++HR FG I + E+S R KTLK F +GK+Q+L+S+DA RG
Sbjct: 496 TNSRDASHR-------FG--GISVAEFSSRLSPGERKKTLKEFEQGKVQLLISTDATARG 546
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+D++GV V+NYD P +I+TY+HR GRTARAG+ G FT+L K + + +L+ A
Sbjct: 547 IDIKGVKCVINYDAPQFIRTYVHRVGRTARAGKAGLAFTMLLKVQENPYFSMLRDA 602
>gi|66800335|ref|XP_629093.1| hypothetical protein DDB_G0293740 [Dictyostelium discoideum AX4]
gi|74896742|sp|Q54BD6.1|DDX51_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx51; AltName:
Full=DEAD box protein 51
gi|60462461|gb|EAL60682.1| hypothetical protein DDB_G0293740 [Dictyostelium discoideum AX4]
Length = 563
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 259/499 (51%), Gaps = 82/499 (16%)
Query: 2 GISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 58
I +LFPVQ V T G D+C+ +PTGSGKTL+YA+P+VQ + R VR +R
Sbjct: 34 SIINLFPVQQEIVPFINRTEG-----HDICVCAPTGSGKTLAYAIPLVQKIVKRVVRRVR 88
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
V++PT DL +QV + F +I
Sbjct: 89 VAVIVPTHDLVIQV---------------------------------------EKTFQSI 109
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L V L++G E LIK Y +S VDI+V+TPGR++
Sbjct: 110 IKGTDLVV-LSLGVKPFHIEQKLLIKNHSYGEHALY---------ESLVDIIVSTPGRIV 159
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE-NRFSDASTFLPSA 237
DHIN T GFTL++L YLV+DE DRLLR+++Q WL V+ T ++ N+ + ++
Sbjct: 160 DHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNQHSDLNQQQEEQLIKYNS 219
Query: 238 FGSLKTIRRCGVERGFKDKPYP------RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
G ++ + + ++ +LVK++LSAT+T +P+K++ L L+ PLF TT
Sbjct: 220 KGDIELFEKSISLKDNNNQMNHLCWSEFKLVKLLLSATMTYNPSKISLLQLNAPLFFTTS 279
Query: 292 ETR---YKLPERLESYKLICESKLKPLYLVALL-QSL--------GEEKCIVFTSSVEST 339
+T+ Y +P L+ +I KPL L+ ++ +SL ++K I FT SV+ T
Sbjct: 280 KTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYESLLKNNANGENKKKIICFTKSVDIT 339
Query: 340 HRLCTLLNHFGE---LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
HRL TLL G+ L+ +EYS R+ L F+ +I +L+ SD M+RGMD++
Sbjct: 340 HRLNTLLKLIGQVDKLKFTCEEYSSSLSTVERADLLSRFKLNQIDILICSDIMSRGMDIQ 399
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
++ V+NY+ P I Y+HR GRTARAG G +T++ K E+K + +++KA+ S +H
Sbjct: 400 DIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYTIVDKSEIKYYISMMKKAER-SQTLH 458
Query: 457 SI--PSSLIESLRPVYKSG 473
+ ++ E + YK G
Sbjct: 459 CLKWKPNVYEKFQSSYKLG 477
>gi|255071295|ref|XP_002507729.1| predicted protein [Micromonas sp. RCC299]
gi|226523004|gb|ACO68987.1| predicted protein [Micromonas sp. RCC299]
Length = 523
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 237/463 (51%), Gaps = 72/463 (15%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA-VRCLRALVVLPT 65
F +Q W+ T G F+RDLC+++PTGSGKTL+YA+PIVQ L + + LR+LV++PT
Sbjct: 42 FKIQADTWRHTGGGLSFDRDLCVSAPTGSGKTLAYAIPIVQALCRQTKLSHLRSLVIVPT 101
Query: 66 RDLALQVNSARCKYCCKNIFGL---IADHSIAEMCVQFDSL----LFISLPQVKDVFAAI 118
DLA QV + K C+ + GL IA S + D+ F P VK F
Sbjct: 102 GDLAAQVGNV-FKPLCQAV-GLKVSIAQGSGIKSLYHNDAFGEQNAFRHHPAVKQKFI-- 157
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L+V Q+++ D S EA I VDILV PGRL+
Sbjct: 158 ---TSLTV-----QTTVTDLTSNT------EADI------------RDVDILVTPPGRLV 191
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
I L+ + +LV+DE DR+LR+ YQ WLP V NR TF ++
Sbjct: 192 TLIRRFARLFLDRVEFLVIDEADRVLRQTYQGWLPLV---------NRTVVTGTF-HTSL 241
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT------GE 292
G RR RL K++ SATLTQDP +LA L L P ++T E
Sbjct: 242 GDRGASRR-------------RLKKLLFSATLTQDPGRLAGLHLKAPHRISTVVSQAMRE 288
Query: 293 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
RY LP L+ Y +I K L L ALL+ +G IVFT+SV++T RL LL+ L
Sbjct: 289 NRYFLPPGLKEYVIISRGDEKLLVLCALLKRIGPTPAIVFTASVDATRRLFRLLHLMIGL 348
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
K EYS R+++LK FR G+ +LV+SDA TRG+D E V ++YD P + KT
Sbjct: 349 PSKPVEYSSYAPLLHRTESLKLFRSGRCSLLVASDAATRGLDFEHVGVTISYDVPTHPKT 408
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL-----QKADN 450
Y+HR GR ARA + G +T+ EV +F +L +K DN
Sbjct: 409 YVHRVGRAARAQRRGLAYTICRPTEVDKFHLMLTNIGVRKEDN 451
>gi|328867619|gb|EGG16001.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 506
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 230/463 (49%), Gaps = 82/463 (17%)
Query: 2 GISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 58
I L PVQ V T G D+ + +PTGSGKTLSY LPIVQ L R +R LR
Sbjct: 20 NIVDLMPVQSEIVPFIARTEG-----HDILVAAPTGSGKTLSYVLPIVQKLHKRIIRRLR 74
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV+LPT DL +Q + F +I
Sbjct: 75 VLVILPTHDLVIQT---------------------------------------EKTFQSI 95
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L V ++G S+ E S L+ Y+ ++ +S VDI+V TPGRL+
Sbjct: 96 IKGTNLVVE-SLGLKSLHLEQSLLVSS-------HYNQQNDSVYYESLVDIVVTTPGRLV 147
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST-----F 233
+H+N T GF L+HL YLV+DE DRLLRE+YQ WL V+ T+S +R + S
Sbjct: 148 EHLNETPGFNLQHLTYLVIDEADRLLRESYQFWLERVIDSTKSGTNDRSINLSNRGDMQI 207
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT--- 290
L S + SL G RL+K++LSAT+T +P K++ L+L+ PL+ ++
Sbjct: 208 LDSKYKSL------GSHLEHLSSKESRLIKLLLSATMTYNPEKISLLELNAPLYYSSTKK 261
Query: 291 --GETRYKLPERLESYKLICESKLKPLYLVALLQSL------GEEKCIVFTSSVESTHRL 342
T+Y +P+ L+ Y + C + KPL L+ ++ S+ + I FT++ E RL
Sbjct: 262 KESSTKYSMPDSLQEYYVACPASQKPLSLIHIVYSILLKKKSDNARIICFTNNKEIAQRL 321
Query: 343 CTLL---NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
TL+ N IK YS RS L++ + I +L+ SD ++RGMDV V+
Sbjct: 322 HTLIGLVNEINGYNIKPALYSSTVSTIERSHLLESLKNNHINLLICSDILSRGMDVPNVD 381
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 442
V+NY+ P Y+HR GRTARAG+ G +T++ D V + K
Sbjct: 382 AVINYNLPLTAVLYVHRVGRTARAGKEGEAYTIV--DTVDKSK 422
>gi|403159589|ref|XP_003320191.2| hypothetical protein PGTG_01103 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168160|gb|EFP75772.2| hypothetical protein PGTG_01103 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 893
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 237/517 (45%), Gaps = 152/517 (29%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RDLC+++PTGSGKTLSY +PIV+TLS+R V LRAL+VLPTRDL LQV
Sbjct: 388 RDLCVSAPTGSGKTLSYIVPIVETLSSRVVCRLRALIVLPTRDLVLQV------------ 435
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
K+ F + GL + GQ S E ++L
Sbjct: 436 ---------------------------KNTFDCFSKGTGLKAAIITGQHSFTKEQAQL-- 466
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
G D L+ +VD+L+ATPGRL+DH+N T GF+L+HLC+LV+DE D+LL
Sbjct: 467 ------GCSRD------GLEGSVDVLIATPGRLVDHLNHTSGFSLQHLCFLVLDEADQLL 514
Query: 205 REAYQAWLPTVLQLTRSDNENR--------------------FSDASTFLPSAF--GSLK 242
++ QAWL VL + + + F + F PS G L
Sbjct: 515 NKS-QAWLHQVLSTSAASEVPKPMEHTEPIKSSFNHPKSLLGFRSSEPFEPSHLLDGPLS 573
Query: 243 TIRRCGVERGFKD------------KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
T+ + G + +P+ R+ ++ SATL +DP KLA L L HP+F+
Sbjct: 574 TVEMHNQDHGLTENLPIETYNPCRLRPF-RI--LLFSATLRRDPVKLAHLGLRHPVFVKI 630
Query: 291 G-------------ETR--------------YKLPERLESYKLICESKLKPLYLVALLQS 323
+TR Y LP+ L+ Y ++ + LKPL LLQS
Sbjct: 631 SSSSTTLVVDGDLDQTRRESGTIDFVDQLNGYCLPKTLKQYLIVTRTDLKPLVFFKLLQS 690
Query: 324 LGEEKCIVFTSSVESTHR---LCTLL-NHFGELR-------------------------- 353
EK + F S++ R LC L+ F L+
Sbjct: 691 QRIEKALCFCKSIDGARRLTGLCRLMAEQFQALKSPNSDDPESNPKQKDQDQKDQKDDVD 750
Query: 354 ----IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
K++ +S R K L F+ G+I +L+ SD + RG+D+ GV NV+NYD P
Sbjct: 751 LVKLCKVECFSSDLSPVERKKLLNKFQSGEINMLICSDIIARGIDITGVQNVINYDSPID 810
Query: 410 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
IK Y+HR GRTARA + GR F+L+ E K K L+
Sbjct: 811 IKKYVHRVGRTARANEHGRAFSLVESQEAKFVKAFLK 847
>gi|440801982|gb|ELR22922.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 689
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 157/416 (37%), Positives = 218/416 (52%), Gaps = 80/416 (19%)
Query: 43 LPIV--QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 100
+P++ TL NR V LRALV+LP RDLALQV
Sbjct: 278 IPVILRSTLLNRVVVRLRALVILPNRDLALQV---------------------------- 309
Query: 101 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK--------------RP 146
K VF + L V + VGQSS + +L++
Sbjct: 310 -----------KSVFDLLCEGTDLKVEIVVGQSSFRKDQEKLVQGEEGPDAADLRGASTS 358
Query: 147 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 206
+ EAG P L+EL VDIL+ TPGRLMD +N TRGFTL+HL +LV+DE DRLL +
Sbjct: 359 EAEAGDRSAP--ALKEL---VDILICTPGRLMDLLNQTRGFTLQHLRFLVIDEADRLLDQ 413
Query: 207 AYQAWLPTVLQLTRSDNENRF------SDASTFL---PSAFGSLKTIR-----RCGVERG 252
++Q WL VLQ T S + R +D L L ++R +
Sbjct: 414 SFQDWLNKVLQATHSSTQGRVYGCVDETDQEAHLRIDARTMRQLTSVRSVHLSSTALHSI 473
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-YKLPERLESYKLICESK 311
++P P L K++ SATLT +P K+A L L++P F + T YK+PE+L+ Y +IC
Sbjct: 474 IPEEPEP-LHKLLFSATLTNNPKKIAALRLNNPHFFSATSTGLYKMPEKLQEYMVICSLA 532
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
KPL L+ LL+ ++ + FTSSVESTHRL LL G+ + EYS Q R++
Sbjct: 533 YKPLVLLYLLEMFDFKRTLCFTSSVESTHRLYLLLTLMGQ--TGVAEYSSTLPQRKRTQI 590
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR--AGQ 425
++ F +G I+++++SDAM+RG+D+E V NV+NYD P +IKTY+HR A AGQ
Sbjct: 591 IEKFAKGDIKIVIASDAMSRGLDIEDVENVINYDVPPFIKTYVHRGPNCASRPAGQ 646
>gi|340368286|ref|XP_003382683.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Amphimedon
queenslandica]
Length = 640
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 240/483 (49%), Gaps = 95/483 (19%)
Query: 1 MGISSLFPVQVAVWQETI----GP------GLFERDLCINSPTGSGKTLSYALPIVQTLS 50
M ++SLFPVQ V E + GP G D+CI +PTG GKTLSY +PIV +L
Sbjct: 180 MSVTSLFPVQCVVLPELLSSSHGPLLSTVSGAPPSDMCICAPTGCGKTLSYVVPIVSSLL 239
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
NR R L+ALVV+P++DLALQV
Sbjct: 240 NRITRELKALVVVPSKDLALQVY------------------------------------- 262
Query: 111 VKDVFAAIAPAVGLSVGLAVG--QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 168
+VF +++ + +G AVG +S + E +LI + P AVD
Sbjct: 263 --NVFVSVSKGTRVRIG-AVGSQNTSFSVEQKQLISH--------HGP---------AVD 302
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
+LVATPGRL+ H+ T +L L YLV+DE DR+ ++Y WL TV+ R + +
Sbjct: 303 VLVATPGRLVRHLQETPFLSLASLRYLVIDEADRIFEQSYHNWLNTVMDSIRETHSSGHC 362
Query: 229 D-ASTFLPSAFGSL-------KTIRRCGVE------RGFKDKPYPR---LVKMVLSATLT 271
+S+ +P + L ++ G+ D YP L K++ SATL+
Sbjct: 363 PLSSSCIPRMYPELWKPSFSKSLLKHKGMHTDSQLSSSINDLIYPAAAPLQKLLFSATLS 422
Query: 272 QDPNKLAQLDLHHPLFLTTGETRYK------LPERLESYKLICESKLKPLYLVALLQSLG 325
DP +L L L+ P T + LP L+ Y + C S KPL L+ L+ +
Sbjct: 423 LDPEQLHLLQLYRPKLFTATPALQEDLGQSILPSTLKEYSISCSSDYKPLVLLHLILTFD 482
Query: 326 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 385
+ + FT S ESTHRL LL E + E SG Q +++ +K +I+ LV
Sbjct: 483 HHRILCFTHSRESTHRLTLLLK---EYDAPVAEISGDLSQEKKNELIKKLTGKEIKALVC 539
Query: 386 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
SD M RGMD+ G++ V+NYD P++ ++Y+HR GRTARAG G +TL +EV ++++++
Sbjct: 540 SDGMARGMDIPGIDCVINYDVPSHFRSYLHRVGRTARAGAEGAAYTLNTFEEVHKWQRMI 599
Query: 446 QKA 448
++A
Sbjct: 600 REA 602
>gi|195495021|ref|XP_002095090.1| GE22191 [Drosophila yakuba]
gi|194181191|gb|EDW94802.1| GE22191 [Drosophila yakuba]
Length = 681
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 229/480 (47%), Gaps = 96/480 (20%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W + P RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 155 MKIKRLFPVQKQVIPWILEAQAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVEC 214
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RAL+VLP +LALQV C K
Sbjct: 215 KVRALIVLPVAELALQVYRVVSALCSKT-------------------------------- 242
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L V L Q + DE +L+++ K G Y S DI+V TPG
Sbjct: 243 -------ELEVCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL++H++AT+GF L+ L +LV+DE DR++ +Q WL + + + A T P
Sbjct: 283 RLVEHLHATKGFCLKSLTFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 340
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
+ L++ F +P+ K++ SATL+QDP KL L L P TT T
Sbjct: 341 LCYAELQS--------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQPRLFTTVLTMP 388
Query: 294 -----------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
RY P L + E +LKPL + AL++ ++ +
Sbjct: 389 VLKDVTEGDADTEANTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVYALVEKYQWKRFL 448
Query: 331 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
FT+S + RL +L+ + K+ E SG +R TL+ F GKI LV SDA+
Sbjct: 449 CFTNSSDQASRLTFVLSLLFQNGTKVAELSGNLSAKIRKTTLRNFSAGKINGLVCSDALA 508
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G TLL ++ FKK+L AD
Sbjct: 509 RGIDVADVDVVLSYEIPRHITTYIHRVGRTARAGRKGTAVTLLTDKDMTLFKKILSDADK 568
>gi|195376467|ref|XP_002047018.1| GJ12159 [Drosophila virilis]
gi|194154176|gb|EDW69360.1| GJ12159 [Drosophila virilis]
Length = 680
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 236/480 (49%), Gaps = 104/480 (21%)
Query: 1 MGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ AV W + P F RD+C+++PTGSGKTL++A+PIVQ L+ R V+
Sbjct: 162 MKIKRLFPVQTAVIPWILEAQAKPEPFRPRDICVSAPTGSGKTLAFAIPIVQLLAKR-VQ 220
Query: 56 C-LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
C +RALVVLP +LALQV V
Sbjct: 221 CKVRALVVLPVAELALQVYK---------------------------------------V 241
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
F A+ L V L Q + DE +L+++ K G+ Y S VDI+V TP
Sbjct: 242 FNALCSKTELEVCLLSKQHRLEDEQEKLLEQYK---GVYY----------SKVDIVVTTP 288
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + R+ + + L
Sbjct: 289 GRLVDHLHATKGFCLKSLQFLVIDEADRIMDAVFQNWLYHLDTHVRTTTDQLLTGVQAPL 348
Query: 235 PSAFGSLKTIRRCGVE--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
C E + +P+ K++ SATL+QDP KL L L P TT
Sbjct: 349 ------------CYQELLNSYGKQPH----KLLFSATLSQDPEKLQNLRLFQPKLFTTVL 392
Query: 293 T--------------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGE 326
T +Y P L + E +LKPL L A++ G
Sbjct: 393 TMPALQLGLGNAEQPEQGVEQSSQFIGKYTTPAELTEQYCLTEMRLKPLTLYAMVLLNGW 452
Query: 327 EKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 385
++ + FT+S ++ +RL +L FG +++E S ++R++ L F G I L+
Sbjct: 453 KRFLCFTNSADTANRLAFVLQQLFGGSPTRVEELSAKMSAAMRAQRLTEFARGSIHGLIC 512
Query: 386 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
SDA+ RG+DV V+ VV+Y+ P +IKTYIHR GRTARAG G TLL + +FKK+L
Sbjct: 513 SDALARGIDVPNVDIVVSYEAPRHIKTYIHRVGRTARAGHKGTAITLLTDKDQAQFKKML 572
>gi|357628805|gb|EHJ77980.1| putative ATP-dependent RNA helicase DDX51 [Danaus plexippus]
Length = 625
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 232/487 (47%), Gaps = 83/487 (17%)
Query: 2 GISSLFPVQVAVW----QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
G++ FPVQ V Q+ P L D+C+++PTGSGKTLS+ LPI+Q L N
Sbjct: 160 GVTHFFPVQEQVIPFIIQQHQHPELLRPHDICVSAPTGSGKTLSFVLPIIQVLMNEIGHH 219
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+RALVVLP ++LA+QV KYC
Sbjct: 220 IRALVVLPVQELAIQVAQVFKKYCTN---------------------------------- 245
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
GL V L G + + E ++++ + IC +DI+V T GR
Sbjct: 246 -----TGLRVQLLSGSTPLQKEQQQIMRFTETLKWIC------------EIDIIVCTAGR 288
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L++H+ T GF+L++L +LV+DE DR++ WL + + + +N S +P
Sbjct: 289 LVEHLQNTEGFSLKNLKFLVIDEADRIMDNIQNDWLYHMEKHIKMENH-----TSNKVPH 343
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-------- 288
+R V K++ SATL+ DP L + L P
Sbjct: 344 LNWVGLNSQRSSVH------------KLLFSATLSPDPELLEEWGLFQPKLFSAIPIQDH 391
Query: 289 --TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 346
+ +Y P+ L+ ++C ++ KPL L +K + FT+S +S HRL LL
Sbjct: 392 PDSNVSKKYTTPDELQEQYVVCSAEEKPLIFYYFFAELKWDKTLCFTNSSQSAHRLTVLL 451
Query: 347 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 406
N + + +K+ E S ++ R L+ F++ +I V++ +DA+ RG+D+ N V++YD
Sbjct: 452 NIWSKGNLKVAELSAALDRTSRELVLRKFKQSEINVIICTDALARGIDIPDCNYVISYDP 511
Query: 407 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
P IKTY+HR GRT RAG++G T++ ++V+ FK +LQ P + + +++ L
Sbjct: 512 PRNIKTYVHRVGRTGRAGRIGNAVTIIVHNQVQMFKDILQSGGKSDIPQLEMQNDILQDL 571
Query: 467 RPVYKSG 473
P Y++
Sbjct: 572 MPGYQNA 578
>gi|401883807|gb|EJT47994.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 743
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 237/468 (50%), Gaps = 87/468 (18%)
Query: 1 MGISSLFPVQVAVWQETIGPGL----FER--DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
+GIS F VQ A+ + + L FE+ D +++PTGSGKTL+Y +PIV+ LS R V
Sbjct: 308 LGISEFFAVQTALLPKLLRLPLTPLPFEKLSDYLVSAPTGSGKTLAYTVPIVEILSKRIV 367
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL+VLPTRDL + QVK+
Sbjct: 368 TRLRALIVLPTRDL---------------------------------------VTQVKET 388
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
++ GL+ A Q+ + D QS +DIL+ATP
Sbjct: 389 LEEVSKGSGLTHSFAHEQTLLVDGA------------------------QSKLDILIATP 424
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRLMDH+ T+GFTL+HL +LV+DE DRLL ++Q WL VL R ++ ++
Sbjct: 425 GRLMDHLAMTKGFTLQHLRFLVIDEADRLLSSSFQNWLSQVLDQCRP---HKHANGEELA 481
Query: 235 PSAFGSLKTIRRCGVERG-FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
S +L G+ RG F+ K++ SATLT+DP K+AQL+L P + T
Sbjct: 482 GSQV-ALAWSEPMGLSRGDFEGSQVIPSSKLLFSATLTRDPAKVAQLNLTSPEYYIVSST 540
Query: 294 R--------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
R ++LP L +I +LKPL L+ LL S G IVFT SV++ RL L
Sbjct: 541 RSITQIGQAFELPSSLTERSIILPPQLKPLNLLYLLHSEGAAPSIVFTKSVDAASRLVRL 600
Query: 346 LNHF-----GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
L +F G ++ + ++ + S R L F GK+ VLV SD ++RG+D+ V +
Sbjct: 601 LTYFEQAYIGGKKLSVASFTRDMKPSERKTMLSDFAAGKLDVLVCSDLISRGIDLPSVAH 660
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
VV+YD P + Y+HRAGRTARAG+ G +T++ K E K FK +L A
Sbjct: 661 VVSYDVPLDMTKYVHRAGRTARAGRDGTVWTMVEKQEAKHFKDMLAAA 708
>gi|328768512|gb|EGF78558.1| hypothetical protein BATDEDRAFT_35707 [Batrachochytrium
dendrobatidis JAM81]
Length = 761
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 234/497 (47%), Gaps = 120/497 (24%)
Query: 1 MGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
MGI FPVQ A+ W +++ PG DLC+ + TGSGKTL+YA+PIV+TL
Sbjct: 162 MGIEHWFPVQEAILPQLLKTRWWTQSVSPG----DLCVAASTGSGKTLAYAVPIVETLLT 217
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + +RALV++PTRDLALQV
Sbjct: 218 RVIPRIRALVIVPTRDLALQV--------------------------------------- 238
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RPKLEAGICYDP---EDVLQEL 163
+ F ++ L V GQ+S + E + L+ L++ + P ED + E
Sbjct: 239 RRTFESLVIGTKLRVAAVTGQASFSAEKALLVSAEIPCSSSLDSLLLQHPLANEDAITES 298
Query: 164 --QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 221
S +DIL+ATPGRLMDH+N T GF+L HL +LV+DE DRLL +++ WL +VL+
Sbjct: 299 GGSSRIDILIATPGRLMDHLNGTPGFSLSHLRFLVIDEADRLLNQSFHGWLGSVLK---- 354
Query: 222 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 281
++ +++ D P L K++ SATLT++P+K+A L
Sbjct: 355 ------------------AVDPVQKEAAASNHLDIPSTALQKLLFSATLTRNPSKIASLR 396
Query: 282 LHHPLFLTTG---------------------------ETRYKLPERLESYKLICESKLKP 314
L +P ++T E R+ P L ++ KP
Sbjct: 397 LRNPRYITVSGSPDGLLDQDVNNVDMNDQPANITSSVEQRFITPPSLVERMVVLSESDKP 456
Query: 315 LYLVALLQSLGEEKCIVFTSSVESTHR-----LCTLLNHFGELRIK---IKEYSGLQRQS 366
L L+ +L +VF SVES HR +L H G+ + +S S
Sbjct: 457 LALLYFFDTLKHSGVLVFVKSVESAHRLSLLLNLSLKLHHGKASNDQPLTEAFSSDLSVS 516
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDV-EGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
R K + F+ G+I L+ SD M RGMD+ E V V+NY P+ IK+Y+HR GRTARAG+
Sbjct: 517 KRQKLISMFKAGQILGLICSDIMARGMDLGESVKVVINYSVPSRIKSYVHRIGRTARAGR 576
Query: 426 LGRCFTLLHKDEVKRFK 442
G +T L +V+ FK
Sbjct: 577 DGIAYTFLESRQVRWFK 593
>gi|194872386|ref|XP_001973017.1| GG15853 [Drosophila erecta]
gi|190654800|gb|EDV52043.1| GG15853 [Drosophila erecta]
Length = 687
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 231/482 (47%), Gaps = 97/482 (20%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W P RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 155 MKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVEC 214
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RAL+VLP +LALQV K C K
Sbjct: 215 KVRALIVLPVAELALQVYRVISKLCSKT-------------------------------- 242
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L V L Q + DE +++++ K G Y S DI+V TPG
Sbjct: 243 -------ELEVCLLSKQHKLEDEQEKVVEQYK---GKYY----------SKADIVVTTPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL++H++AT+GF L+ L +LV+DE DR++ +Q WL + + + A T P
Sbjct: 283 RLVEHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 340
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----- 290
+ L++ F +P+ K++ SATL+QDP KL L L P TT
Sbjct: 341 LCYAELQS--------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQPRLFTTVLTMP 388
Query: 291 -------GET-------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
GE RY P L + E +LKPL + AL++ ++ +
Sbjct: 389 VLKDITEGEADTEAHTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFL 448
Query: 331 VFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
FT+S + RL +L F + + E SG VR + LK F GKI L+ SDA+
Sbjct: 449 CFTNSSDQASRLTFVLKVLFKKYSTIVSELSGNLSARVRKEKLKDFSAGKINGLICSDAL 508
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G TLL + ++ FKK+L AD
Sbjct: 509 ARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTLLTEQDMALFKKILSDAD 568
Query: 450 ND 451
+
Sbjct: 569 KE 570
>gi|406696286|gb|EKC99578.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 743
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 235/468 (50%), Gaps = 87/468 (18%)
Query: 1 MGISSLFPVQVAVWQETIGPGL----FER--DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
+GIS F VQ A+ + + L FE+ D +++PTGSGKTL+Y +PIV+ LS R V
Sbjct: 308 LGISEFFAVQTALLPKLLRLPLTPLPFEKLSDYLVSAPTGSGKTLAYTVPIVEILSKRIV 367
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL+VLPTRDL + QVK+
Sbjct: 368 TRLRALIVLPTRDL---------------------------------------VTQVKET 388
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
++ GL+ A Q+ + D QS +DIL+ATP
Sbjct: 389 LEEVSKGSGLTHSFAHEQTLLVDGA------------------------QSKLDILIATP 424
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRLMDH+ T+GFTL+HL +LV+DE DRLL ++Q WL VL R + L
Sbjct: 425 GRLMDHLAMTKGFTLQHLRFLVIDEADRLLSSSFQNWLSQVLDQCRPHKPANGEE----L 480
Query: 235 PSAFGSLKTIRRCGVERG-FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+ +L G+ RG F+ K++ SATLT+DP K+AQL+L P + T
Sbjct: 481 AGSQVALAWSEPMGLSRGDFEGSQVIPSSKLLFSATLTRDPAKVAQLNLTSPEYYIVSST 540
Query: 294 R--------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
R ++LP L +I +LKPL L+ LL S G IVFT SV++ RL L
Sbjct: 541 RSITQIGQAFELPSSLTERSIILPPQLKPLNLLYLLHSEGAAPSIVFTKSVDAASRLVRL 600
Query: 346 LNHF-----GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
L +F G ++ + ++ + S R L F GK+ VLV SD ++RG+D+ V +
Sbjct: 601 LTYFEQAYIGGKKLSVASFTRDMKPSERKTMLSDFAVGKLDVLVCSDLISRGIDLPSVAH 660
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
VV+YD P + Y+HRAGRTARAG+ G +T++ K E K FK +L A
Sbjct: 661 VVSYDVPLDMTKYVHRAGRTARAGRDGTVWTMVEKQEAKHFKDMLAAA 708
>gi|405968018|gb|EKC33126.1| ATP-dependent RNA helicase DDX51 [Crassostrea gigas]
Length = 1179
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 229/515 (44%), Gaps = 136/515 (26%)
Query: 3 ISSLFPVQVAVWQETIG----------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
I FPVQ+ V E + G D+C+++PTGSGKTL++ LPIVQ L +R
Sbjct: 253 IDYFFPVQMQVIPEILDTVRYGFVLGRAGFRPPDICVSAPTGSGKTLAFVLPIVQALKSR 312
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
+ +RA+VVLP RDLA+QV
Sbjct: 313 VLCRIRAMVVLPVRDLAVQVFK-------------------------------------- 334
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
VF L VG+ VGQ + E L+++ + L+S VDI+VA
Sbjct: 335 -VFLQYTKGTNLKVGMIVGQKQFSVEQHALVRQR-------------VGGLESKVDIVVA 380
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DHIN T GF+L L +LV+DE DR++ Q WL V EN
Sbjct: 381 TPGRLVDHINKTPGFSLTDLRFLVIDEADRIMEHVKQDWLSHV--------ENAVFSGGR 432
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-- 290
PS SL C K + L K++ SATL+Q+P KL QL+L P T+
Sbjct: 433 TAPS---SLNVYNSC--------KHHMPLQKLLFSATLSQNPEKLQQLNLFQPKLFTSVV 481
Query: 291 -----------------------------GETR------YKLPERLESYKLICESKLKPL 315
GE + Y P L+ Y + E+ KPL
Sbjct: 482 DGGSLPRPLESEGEGNKDDQVTDRLSGPGGEVKGQFVGKYTTPLGLKEYTVEVEAFEKPL 541
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
++ L +L +L L+ FG I + E + + S RSK LK F
Sbjct: 542 VILHFLHNL----------------QLYHLIRLFG--GINVAEITAKLQASRRSKVLKKF 583
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ G I +L+ SDAM RGMD++ V V++YD P YIKTYIHR GRTARAG+ G +LL K
Sbjct: 584 QNGSIDILICSDAMARGMDIDDVQYVISYDPPPYIKTYIHRVGRTARAGKEGTALSLLQK 643
Query: 436 DEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
E FK + ++A + S +E L Y
Sbjct: 644 KEFHHFKTMTKEAGKTYIEKFKVHSKEMEGLLEKY 678
>gi|320169870|gb|EFW46769.1| DEAD-box ATP-dependent RNA helicase 1 [Capsaspora owczarzaki ATCC
30864]
Length = 866
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 265/572 (46%), Gaps = 149/572 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPG---LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 57
MGI SLFPVQ ++ E +G + DLC++SPTGSGKT+++A+PIV LS R V L
Sbjct: 277 MGIQSLFPVQASLLPEILGSASSAVHPGDLCVSSPTGSGKTMAFAIPIVNKLSTRVVPRL 336
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF--ISLPQVKDVF 115
RAL++ PTR+LA QV K++F S+A+ +L+ +SL +D+
Sbjct: 337 RALILQPTRELAAQV---------KSVF-----DSLAQFTPLTTALITGQLSLAAEQDLL 382
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
AA AP+ +S +AD + L +G ++ D++VATPG
Sbjct: 383 AAGAPS----------RSVLADSVLALAG--NRSSGSAQQATPIV-----LCDVVVATPG 425
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH+N L+HL YLV+DE DRLL ++Y WLP VL R+ R + S+
Sbjct: 426 RLVDHLNCNPAL-LDHLEYLVLDEADRLLSQSYSDWLPRVL-AGRTTRHQRAAAQSSNNA 483
Query: 236 SA--FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL------------- 280
SA G + G + + K++ SATLT +P K+A L
Sbjct: 484 SATLAGESGGVGSAGYGMVNNSSSHSIMRKLLFSATLTNNPEKIAALHLVFPRYFVAAPN 543
Query: 281 -----------------------DLHHPLFLTTGET--RYKLPERLESYKLICESKLKPL 315
D PLF G+ R+ LP L ++C+ KPL
Sbjct: 544 ATLSVKPVAGAGADAATAMDTTADGQEPLFDADGDNAARFTLPATLTQEMIVCQLADKPL 603
Query: 316 YLV-----ALLQSLG------EEKC-------IVF------------------------- 332
L L+++ G +E +VF
Sbjct: 604 ALAQRLYGTLIRAAGKTLPADDEAAATTTPHRVVFASDDEEDADPSNEEASAKKRGTPLS 663
Query: 333 ------------TSSVESTHRLCTLL-----NHFGELR-IK----IKEYSGLQRQSVRSK 370
T+SVESTHRL LL ELR I+ + E+S + R K
Sbjct: 664 RAIKALPQALVFTASVESTHRLALLLRNLLKQALPELRDIQLGSLVAEFSSSLSKDDRGK 723
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L FR ++ VL+ SDAM RGMD+E V V+NYD P Y KTY+HR GRTARAG+ G+
Sbjct: 724 MLNRFRTNQVHVLICSDAMARGMDIENVAEVINYDVPVYFKTYVHRVGRTARAGRSGQAL 783
Query: 431 TLLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 462
TLL +EV FK++L KA HS+P+ +
Sbjct: 784 TLLRSEEVAAFKRMLGKAG------HSLPAKI 809
>gi|17136666|ref|NP_476833.1| dead box protein 73D [Drosophila melanogaster]
gi|12644178|sp|P26802.3|DDX51_DROME RecName: Full=Probable ATP-dependent RNA helicase Dbp73D;
Short=DEAD box protein 73D
gi|4972732|gb|AAD34761.1| unknown [Drosophila melanogaster]
gi|7294064|gb|AAF49419.1| dead box protein 73D [Drosophila melanogaster]
gi|33589494|gb|AAQ22514.1| LD27814p [Drosophila melanogaster]
Length = 687
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 233/481 (48%), Gaps = 97/481 (20%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W P RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 155 MKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC 214
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV I+E+C + +
Sbjct: 215 KVRALVVLPVAELALQVYRV-----------------ISELCSKTE-------------- 243
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L V L Q + DE +L+++ K G Y S DI+V TPG
Sbjct: 244 --------LEVCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + + + A T P
Sbjct: 283 RLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 340
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
+ L+ F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 341 LCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMP 388
Query: 294 -----------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
RY P L + E +LKPL + AL++ ++ +
Sbjct: 389 VLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFL 448
Query: 331 VFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
FT+S + RL +L F + K+ E SG VR++ L+ F GKI L+ SDA+
Sbjct: 449 CFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDAL 508
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G T+L + ++ FKK+L A+
Sbjct: 509 ARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDAN 568
Query: 450 N 450
Sbjct: 569 K 569
>gi|499204|gb|AAC14192.1| D-E-A-D box protein [Drosophila melanogaster]
Length = 644
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 233/481 (48%), Gaps = 97/481 (20%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W P RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 155 MKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC 214
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV I+E+C + +
Sbjct: 215 KVRALVVLPVAELALQVYRV-----------------ISELCSKTE-------------- 243
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L V L Q + DE +L+++ K G Y S DI+V TPG
Sbjct: 244 --------LEVCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + + + A T P
Sbjct: 283 RLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 340
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
+ L+ F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 341 LCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMP 388
Query: 294 -----------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
RY P L + E +LKPL + AL++ ++ +
Sbjct: 389 VLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFL 448
Query: 331 VFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
FT+S + RL +L F + K+ E SG VR++ L+ F GKI L+ SDA+
Sbjct: 449 CFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDAL 508
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G T+L + ++ FKK+L A+
Sbjct: 509 ARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDAN 568
Query: 450 N 450
Sbjct: 569 K 569
>gi|328863604|gb|EGG12703.1| hypothetical protein MELLADRAFT_101203 [Melampsora larici-populina
98AG31]
Length = 892
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 250/528 (47%), Gaps = 134/528 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER---------------DLCINSPTGSGKTLSYALPI 45
+GI L PVQ++V+ IG ++ D+CIN+PTGSGKTLSY +PI
Sbjct: 374 IGIEYLLPVQISVFSALIGKLRNKKITPSSILYPINHPPSDICINAPTGSGKTLSYIVPI 433
Query: 46 VQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 105
V+TLS+R V LRAL+VLPTRDL LQV
Sbjct: 434 VETLSSRTVVRLRALIVLPTRDLVLQV--------------------------------- 460
Query: 106 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 165
K F +I+ GL + + GQ S + E + L +G P + E +
Sbjct: 461 ------KQTFESISKGTGLKLAIVTGQHSFSQEQALL-------SGNA--PFNTSSECK- 504
Query: 166 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-----LTR 220
VD+++ATPGRL+DH+N T GF+L HLC+L++DE D+LL + Q+WL +L+ L++
Sbjct: 505 -VDVVIATPGRLIDHLNQTPGFSLSHLCFLILDEADQLLSKD-QSWLYQILKYELKKLSK 562
Query: 221 SDNENR----FSDASTFLPSAFGSLKTIR--------------RCG-----------VER 251
+ + ++ + D + + L + R C +E
Sbjct: 563 THSNSKQIINYDDEDSEMMIQQEELNSARNEPLPLLKKFMDSVECNEISSDWRPLLKLED 622
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE---------TRYKLPERLE 302
K +P+ R+ ++ SATL +DP KL L L +PLF+ + Y LP L+
Sbjct: 623 PCKTRPF-RI--LLFSATLKRDPTKLTHLGLRNPLFIKVQNPSVEVIDNFSGYSLPPNLQ 679
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN------------HFG 350
+ ++ +LKPL L L++ + ++F SVE RL L
Sbjct: 680 QHLIVTTPQLKPLTLFHLIKVREVKNALIFCKSVEGATRLVNLYQLMRKGWMEKSTTEAN 739
Query: 351 ELRIKIKEYSGLQRQSV----------RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
E IK E S + + R + L F+ G I +LV SD + RG+D+ + N
Sbjct: 740 ENEIKDGENSNVLGTAALFSSDLKPIDRKRILNEFQNGSINLLVCSDVIARGLDLPTIEN 799
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
V+NYD P IK YIHR GRTARAG+ G+ ++L+ E + K+ ++ +
Sbjct: 800 VINYDTPVNIKKYIHRIGRTARAGKFGQAWSLVEFQEARYLKESIKDS 847
>gi|198463449|ref|XP_001352828.2| GA21960 [Drosophila pseudoobscura pseudoobscura]
gi|198151259|gb|EAL30329.2| GA21960 [Drosophila pseudoobscura pseudoobscura]
Length = 697
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 232/478 (48%), Gaps = 101/478 (21%)
Query: 1 MGISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
M I LFPVQ V W Q P L RD+C+++PTGSGKTL++A+PIVQ L+NR V
Sbjct: 160 MKIKRLFPVQRTVIPWILEAQGQPAP-LRPRDICVSAPTGSGKTLAFAIPIVQLLNNR-V 217
Query: 55 RC-LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RC +RALVVLP +LALQV
Sbjct: 218 RCKVRALVVLPVAELALQVFK--------------------------------------- 238
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
V A+ L V L Q + DE +L++ + G Y S DI+V T
Sbjct: 239 VIRALCSKTELEVCLLSKQHRLEDEQEKLVE---VYKGQIY----------SKADIVVTT 285
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + R A T
Sbjct: 286 PGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAFFQNWLYHLDNHVRETANQLL--AGTQ 343
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT--- 290
P L + P+ K++ SAT++QDP KL L L P TT
Sbjct: 344 PPLCLKELYAT--------YGKVPH----KLLFSATMSQDPEKLQNLRLFQPKLFTTVFA 391
Query: 291 -------------GET---------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 328
ET +Y P L + E ++KPL L AL++ ++
Sbjct: 392 LPVPKSDEQADGDEETTPNTGHFAGKYTTPVELTEQFCVTELRIKPLTLFALVEKYQWKR 451
Query: 329 CIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
+ FT+S E+ +RL ++ F K+ E SG VR+KTL F G+I L+ SD
Sbjct: 452 FLCFTNSTETANRLAFVMGKLFSTGPTKVAELSGKLSALVRTKTLSDFARGRINGLICSD 511
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
A+ RG+DV V+ V++Y+ P +IKTYIHR GRTARAG+ G TLL + E +FKK+L
Sbjct: 512 ALARGIDVADVDVVLSYETPRHIKTYIHRVGRTARAGRKGTAVTLLTEQEQAQFKKML 569
>gi|195590910|ref|XP_002085187.1| GD12444 [Drosophila simulans]
gi|194197196|gb|EDX10772.1| GD12444 [Drosophila simulans]
Length = 687
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 230/481 (47%), Gaps = 97/481 (20%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W P RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 155 MKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC 214
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV I+ +C + D
Sbjct: 215 KVRALVVLPVAELALQVYRV-----------------ISALCSKTD-------------- 243
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L L Q + DE +L+++ K G Y S DI+V TPG
Sbjct: 244 --------LEACLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL++H++AT+GF L+ L +L++DE DR++ +Q WL + + + A T P
Sbjct: 283 RLVEHLHATKGFCLKSLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 340
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
+ L+ F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 341 LCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMP 388
Query: 294 -----------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
RY P L + E +LKPL + AL++ ++ +
Sbjct: 389 VLKDATEEGSDTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFL 448
Query: 331 VFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
FT+S + RL +L F + K+ E SG VR + L+ F GKI L+ SDA+
Sbjct: 449 CFTNSSDQASRLTFVLEVLFQKYNTKVSELSGNLSAKVRKERLRDFAAGKINGLICSDAL 508
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G TLL + ++ FKK+L A+
Sbjct: 509 ARGIDVADVDVVLSYEIPRHITTYIHRVGRTARAGRKGTAVTLLTEYDMTLFKKILSDAN 568
Query: 450 N 450
Sbjct: 569 K 569
>gi|397634960|gb|EJK71658.1| hypothetical protein THAOC_06880 [Thalassiosira oceanica]
Length = 790
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 260/543 (47%), Gaps = 101/543 (18%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSN-------RAVRCLRALVVLPTRDLALQVNSARC 77
RD+C +SPTGSGKTL++ LPI+ L + R +R LRALVVLP+RDLA QV+
Sbjct: 221 RDVCCHSPTGSGKTLAFVLPILTALHDGTSCGGARGLRRLRALVVLPSRDLARQVHGVFM 280
Query: 78 KYC----CKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV----------- 122
+Y K + ++ + SL+ S + + V
Sbjct: 281 RYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEE 340
Query: 123 -GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
V + +SI++ +S R ++ C++ + + SAVDILV TPGRL+DH+
Sbjct: 341 ANARVRHSFDPTSISEALSAFDGRGSKDS--CFEATPKICGI-SAVDILVCTPGRLVDHL 397
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN-------ENRFS------ 228
++T GFTL+HL ++V+DE DRL+ + YQ W+ VLQ + S+N + F
Sbjct: 398 DSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQASNSENCFEPLNLDMSFREYIRQP 457
Query: 229 -----DASTF--------------LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
D TF S G T G+ G +P P L K++ SAT
Sbjct: 458 LRTAPDGQTFNIDPVTHRIAGSGAAHSLLGDSNTTE-SGLIGGTIGRPVP-LRKLLFSAT 515
Query: 270 LTQDPNKLAQLDLHHPL-----FLTTGET----------RYKLPERLESYKLICESKLKP 314
LTQDP KLA+L L +P +L ++ +Y LP L + C ++ KP
Sbjct: 516 LTQDPQKLARLGLDNPKHYDANYLKKHQSGSATEEAKAGKYFLPVGLRESMVECTAEQKP 575
Query: 315 L------------YLVALLQSLGEEKCIVFTSSVESTHRLCTLL------NHFGELRIKI 356
L + + + IVFTSSV+STHRL LL +G L +
Sbjct: 576 LVLLALLLDERRQHKMVESSEQAADLTIVFTSSVDSTHRLARLLQLLWAAGGYG-LPSHV 634
Query: 357 KEYSGLQRQSVRSKTLKAFREG-----KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
EYS R+ L+ R K+ VLV SD M RGMD+ V V+NYD P++ K
Sbjct: 635 AEYSSSIDTKQRAAILRRCRSSLGENEKVSVLVCSDGMARGMDLPSVGVVINYDVPSFAK 694
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH--SIPSSLIESLRPV 469
TYIHR GRTAR G+ GR +L +V +F+K+ D + +H S+ L++ P+
Sbjct: 695 TYIHRCGRTARCGRTGRAINVLKGGQVNKFRKMRSLIDGGADAVHEGSVKKDLVKGALPL 754
Query: 470 YKS 472
YK+
Sbjct: 755 YKA 757
>gi|195328224|ref|XP_002030816.1| GM24369 [Drosophila sechellia]
gi|194119759|gb|EDW41802.1| GM24369 [Drosophila sechellia]
Length = 687
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 229/481 (47%), Gaps = 97/481 (20%)
Query: 1 MGISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
M I LFPVQ V W P RD+C+++PTGSGKTL++A+PIVQ LS R
Sbjct: 155 MKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC 214
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RALVVLP +LALQV I+ +C + D
Sbjct: 215 KVRALVVLPVAELALQVYRV-----------------ISALCSKTD-------------- 243
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L L Q + DE +L+++ K G Y S DI+V TPG
Sbjct: 244 --------LEACLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH++AT+GF L+ L +L++DE DR++ +Q WL + + + A T P
Sbjct: 283 RLVDHLHATKGFCLKSLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAP 340
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
+ L+ F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 341 LCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMP 388
Query: 294 -----------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
RY P L + E +LKPL + AL++ ++ +
Sbjct: 389 VLKDATEEGSDTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFL 448
Query: 331 VFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
FT+S + RL +L F + + E SG VR + L+ F GKI L+ SDA+
Sbjct: 449 CFTNSSDQASRLTFVLKVLFQKYSTNVSELSGNLSAKVRKERLRDFAAGKINGLICSDAL 508
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G TLL + ++ FKK+L A+
Sbjct: 509 ARGIDVADVDVVLSYEIPRHITTYIHRVGRTARAGRKGTAVTLLTEYDMTLFKKILSDAN 568
Query: 450 N 450
Sbjct: 569 K 569
>gi|345492759|ref|XP_001599929.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Nasonia
vitripennis]
Length = 631
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 229/498 (45%), Gaps = 112/498 (22%)
Query: 2 GISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
G LFPVQ V W + G + RD C++ PTGSGKTL+YALPI+Q L + VR
Sbjct: 185 GFDKLFPVQARVLAWLVKCDQDYKTGKWVRDTCVSMPTGSGKTLAYALPIIQLLQHNFVR 244
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R L+VLP ++LA QV DV
Sbjct: 245 LVRCLIVLPVQELATQVY---------------------------------------DVI 265
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
+ + + L G SS +E +L+++ + + I S VDI++ATPG
Sbjct: 266 SKYSTGTSPRIALISGASSFKEEQEKLVQKTEKDDYI------------SRVDIVIATPG 313
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T GF+L L +LV+DE DR WL ++P
Sbjct: 314 RLIDHIRKTEGFSLSALRFLVIDEADRATE-----WL-------------------QYIP 349
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG---- 291
+ V + K++LSATL+QDP KL++L L P+ T+
Sbjct: 350 FPHSKAPPLSVANVRSSWNTPAQ----KLLLSATLSQDPEKLSRLGLFRPILFTSAVVDL 405
Query: 292 ---------------ETRYKLPERLESYKLICESKLKPLYLV-ALLQSLGEEKCIVFTSS 335
+RY P L + C + KPL L L++ EK +VFT+S
Sbjct: 406 EKTDKDINLDEDLNVASRYGNPSELTERIVECSIQHKPLALYRQLMKDEVIEKTLVFTNS 465
Query: 336 VESTHRLCTLLNHFGELR-IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
E+ HRL LL + + + + E S R +TL+ F +G ++VLVSSDA+ RG+D
Sbjct: 466 AEAAHRLAILLQSLLKSKDVTVGELSAQLGSKQREETLEKFIQGTLRVLVSSDALARGLD 525
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
+ + VV+YD P ++K YIHRAGRT R G G +LL +++ F ++L K
Sbjct: 526 IPEIKLVVSYDLPKHVKGYIHRAGRTGRGGHPGTAISLLLPNQIALFSRMLNKVGK---- 581
Query: 455 IHSIPSSLIESLRPVYKS 472
S+P+ ESL V +S
Sbjct: 582 --SVPTPEKESLDEVAES 597
>gi|293334099|ref|NP_001169826.1| uncharacterized protein LOC100383718 [Zea mays]
gi|224031859|gb|ACN35005.1| unknown [Zea mays]
Length = 174
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 132/177 (74%), Gaps = 7/177 (3%)
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
VGLSVG AVGQSSIADE+S L+ +PK E D E V E Q+ +DILVATP RLMDHI
Sbjct: 2 VGLSVGSAVGQSSIADEVSSLVPKPKQEFYPTIDEEYVQMEPQTKIDILVATPERLMDHI 61
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS---DASTFLPSAF 238
N T GF+LEHL YLV+DETDR++REAYQ+WLPTV+QLT S ++ D+ T L
Sbjct: 62 NMTNGFSLEHLQYLVIDETDRMVREAYQSWLPTVIQLTHSISQGHSWHDIDSQTLL---- 117
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
L +IRR GVER FK K YPRL KMVLSATLTQDP+KL+QL+LHHPL L +G+ RY
Sbjct: 118 HPLTSIRRSGVERVFKGKCYPRLGKMVLSATLTQDPSKLSQLELHHPLLLNSGKKRY 174
>gi|321459585|gb|EFX70637.1| hypothetical protein DAPPUDRAFT_112535 [Daphnia pulex]
Length = 721
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 226/469 (48%), Gaps = 98/469 (20%)
Query: 3 ISSLFPVQVAV--WQETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
I FPVQ V W LF D+C+++PTGSGKTL++ LP +Q L ++VR LR
Sbjct: 249 IGFFFPVQQQVIPWLLESQQQLFRPCDMCVSAPTGSGKTLAFVLPTIQALWRQSVRRLRC 308
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
L VLP DLA+QV +C
Sbjct: 309 LAVLPVHDLAVQVYRVYLSFCA-------------------------------------- 330
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L V L GQ+S DE L+++ K AG + + DI+V TPGRL+D
Sbjct: 331 -GTNLQVALISGQASFYDEQQLLVRKGK--AG----------QYLTKPDIVVCTPGRLVD 377
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ T GF+L+ L YL++DE DR++ E + WL V + +EN + +
Sbjct: 378 HLQRTPGFSLKSLRYLIIDEADRIMEEEHNDWLFHVEKAIGLSSENLVAQKLS------- 430
Query: 240 SLKTIRRCGVERGFKDKPYPRLV-KMVLSATLTQDPNKLAQLDLHHPLFLTT------GE 292
+P+ + V K++ SATL+QDP KL +L L P T+ E
Sbjct: 431 ----------------RPWEKYVQKLLFSATLSQDPEKLTRLGLFQPKLFTSVVSTESAE 474
Query: 293 T------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 340
+ ++ P L + C LKPL + LL+ + FT+S +TH
Sbjct: 475 SADNTIQSHHFVGKFTTPAELTEHFFKCPPMLKPLAVYCLLKKFKYHSALCFTNSRSATH 534
Query: 341 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
RLC LL FG+L K+ E S ++ R K LK F GKI +LV +DA++RGMD+ V+
Sbjct: 535 RLCELLKQFGDL--KVAECSSEISKAPRDKLLKDFSTGKIDLLVCTDAVSRGMDLGVVDC 592
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
V++YD P Y+K YIHRAGR ARAG+ G T+L E+ F KLL A+
Sbjct: 593 VISYDSPKYVKNYIHRAGRAARAGRPGTAITILMDSEMHGFNKLLAMAE 641
>gi|198425548|ref|XP_002130172.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
[Ciona intestinalis]
Length = 636
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 241/504 (47%), Gaps = 107/504 (21%)
Query: 1 MGISSLFPVQVAVW-------QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNR 52
+GI+ LFPVQ V Q +I LF RDLC+++PTGSGKT+++ALPIVQ L R
Sbjct: 192 IGITQLFPVQQKVIPYILRDAQRSISHQLFPPRDLCVSAPTGSGKTIAFALPIVQALLQR 251
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
VV TR AL V+ R E+ Q +
Sbjct: 252 --------VVPATR--ALVVSPTR------------------ELSAQ-----------IY 272
Query: 113 DVFAAIAPAVGLS-VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF ++ L + + + S+ E L+ K L DI+V
Sbjct: 273 KVFVSLCRNTQLKCILITAAKGSLLQEQRALLNFGK-------------TGLACPADIVV 319
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL DH++ T F+L+ L +LV+DE DR++ + +Q WL V Q + D+
Sbjct: 320 ATPGRLADHLSQTSAFSLDKLRFLVIDEADRMMEQIHQRWLTLVEQ-------KVYKDSF 372
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 290
LP +LK++ + + L K++ SATL+ DP KL QL+L P LF
Sbjct: 373 KPLPQHL-ALKSVTKNRIP----------LQKLLFSATLSADPEKLQQLNLFQPRLFAAV 421
Query: 291 GET-----------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
+ +Y P+ LE Y + C + KPL + L+ L + + + F
Sbjct: 422 VKPVQDNNMKCDVEENDFIGKYATPDGLEQYMIHCTAGEKPLITLNLV--LNKTRVLCFA 479
Query: 334 SSVESTHRLCTLLNHF----GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
S+E+T +L L+ + G+ E++ S R K LK F GKI VLV SD+M
Sbjct: 480 GSIETTRKLSMLIQMYADKEGKKEFICTEFASHLPSSKRGKVLKDFISGKINVLVCSDSM 539
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
RG+DV V +V+ YD P IKTYIHR GRTARAG G +TLL K E+ FKK++ AD
Sbjct: 540 ARGLDVPCVEHVILYDVPPLIKTYIHRIGRTARAGATGTAYTLLRKQEIFHFKKMI--AD 597
Query: 450 NDSCPIHS--IPSSLIESLRPVYK 471
C + + IP + + +Y+
Sbjct: 598 AGKCKVKTMKIPKESTQKMVSIYE 621
>gi|326429455|gb|EGD75025.1| hypothetical protein PTSG_07250 [Salpingoeca sp. ATCC 50818]
Length = 751
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 221/432 (51%), Gaps = 77/432 (17%)
Query: 2 GISSLFPVQVAVWQETI---GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 58
G S LFPVQ + + + D+C+++PTGSGKTL+Y +PI+Q L R V LR
Sbjct: 256 GFSRLFPVQAVIVPDMLRSRHSAYPAGDICVSAPTGSGKTLAYVIPILQRLCTRVVPQLR 315
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
A+VVLPTR L QV+ A + C +NI AD ++
Sbjct: 316 AVVVLPTRQLVQQVH-AVFEACSRNIH---ADSTVP------------------------ 347
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ V + GQ+++ E + + +P+L+ SAVDI++ TPGRL+
Sbjct: 348 -----IRVAMCAGQTALWKE--QQLLQPRLDGS-------------SAVDIVITTPGRLV 387
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DHI+ T GFTL+H+ +LVVDE DRLL ++YQ+WL + + D + P +
Sbjct: 388 DHIDRTDGFTLQHVEFLVVDEADRLLMQSYQSWLSKLHNCLFAGGR---PDPTNLTPQMY 444
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP---LFLTTGET-- 293
+ R F P + KM SATL++DP +A L L P L TG+
Sbjct: 445 A----LMRAACAHNF---PGVHVQKMFFSATLSRDPQIIANLRLCFPRMYLATQTGQAVV 497
Query: 294 ---------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 344
+P +L + ++C + KPL L+ LL SL ++ +VF SSVE+T RL T
Sbjct: 498 CVFGGKKGVNTVIPPQLHEHSIVCSASEKPLVLLYLLSSLQMDRTLVFASSVETTTRLYT 557
Query: 345 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 404
LL FG +R +++ S Q S LK F G+I VLV SD M RG+D+ V NV+ Y
Sbjct: 558 LLKLFGAVR--VQQISSKQDARKSSGILKKFERGEISVLVCSDTMARGIDLANVENVICY 615
Query: 405 DKPAYIKTYIHR 416
D P+ KTYIHR
Sbjct: 616 DCPSKPKTYIHR 627
>gi|47214668|emb|CAG00904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 221/493 (44%), Gaps = 125/493 (25%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GI FPVQ V IG G + RD+C+++PTGSGKTL++ +P+VQ L
Sbjct: 45 GIDHFFPVQAEVIPAILEAAQQGLLIGRGGYRPRDICVSAPTGSGKTLAFVIPVVQVLMQ 104
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RAL VLPT++LA QV
Sbjct: 105 RVVCHVRALAVLPTKELA---------------------------------------QQV 125
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
VF+A A L V + GQ S++ E + L + AG+ +S DI+V
Sbjct: 126 YKVFSAYAEGTSLRVLVLAGQRSLSAEQASL---SEYRAGV----------RRSQADIIV 172
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHIN G L+ L +L++DE DR++ +QAWL V++ T R +AS
Sbjct: 173 ATPGRLVDHINKKSGLKLDQLRFLIIDEADRMIDSMHQAWLSQVVKATYGTGGGR--EAS 230
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 290
+ + + C P L K++ SATLTQ+P KL QLDLH P LF +T
Sbjct: 231 SIFSRSEAA------CATAASLSPPQMP-LQKLLFSATLTQNPEKLQQLDLHQPRLFSST 283
Query: 291 GET------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
R+ P+ L + + C KPL ++ + + + FT+S ++
Sbjct: 284 HRQADATVPAAQKAERFDFPQGLSEFYVPCTLSRKPLLILHFILRMKLSPILCFTNSRQA 343
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
HR L+S+DA RG+D+ GV
Sbjct: 344 AHR-----------------------------------------LISTDAAARGIDISGV 362
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
VVNYD P Y++TY+HR GRTARAG+ G FT L + K F K++ A + +
Sbjct: 363 KCVVNYDAPQYVRTYVHRVGRTARAGKSGLAFTFLLGVQEKNFLKMVMDAGSPGIQKQIV 422
Query: 459 PSSLIESLRPVYK 471
S ++ + Y+
Sbjct: 423 KSESLKGMEGRYE 435
>gi|242019954|ref|XP_002430423.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515553|gb|EEB17685.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 518
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 218/494 (44%), Gaps = 90/494 (18%)
Query: 2 GISSLFPVQVAVW-----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
GI+ FPVQ V E L+ D+C+++PTGSGKTL++ LPI+Q L R +
Sbjct: 50 GITHFFPVQHQVIPCVLENERKPYLLWPNDICVSAPTGSGKTLAFVLPILQVLYKRIIPK 109
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+RALVVLP +DLA QV VF
Sbjct: 110 IRALVVLPVQDLA---------------------------------------NQVFKVFE 130
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
A L V L + S E + L K D L S DI+V TPGR
Sbjct: 131 TYAEPTDLKVLLLTPKRSFTAEQNLLYKF------------DDLGNYHSLTDIIVTTPGR 178
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L++H+ T L YLV+DE DR++ WL L + N S+ +
Sbjct: 179 LVEHLTKTNELNFSELKYLVIDEADRVMENVQNDWL---YHLNKYIN----SECCKSYQA 231
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET-- 293
S I K P K++ SATL+QDP KL L L HP LF + E+
Sbjct: 232 PIVSYNNI--------LNQKRPPN--KLLFSATLSQDPEKLQALGLFHPRLFTSVVESGK 281
Query: 294 --------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 339
+Y P L+ Y +C KPL L LL S + + F +S +T
Sbjct: 282 STEKNNNDESKFIGKYTTPAELKEYYTVCSKVNKPLLLHHLLISKSWKNILCFVNSSAAT 341
Query: 340 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
+L +L + + +++ S QS R++ L+ F GK+ +L+SSDA+ RG+D+ V
Sbjct: 342 FKLAFILKKLCKKKYTVQQLSANIVQSKRNRILQNFENGKVDILISSDALARGIDIPNVK 401
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
VV+YD P ++KTY+HR GRT RAG+ G L EV F K++ A +S + +
Sbjct: 402 YVVSYDCPKFVKTYVHRIGRTGRAGKEGHSLAFLTSKEVTSFNKMVSAAGKNSVDVFNFE 461
Query: 460 SSLIESLRPVYKSG 473
+E YK
Sbjct: 462 VEELEQYEVTYKKA 475
>gi|403417594|emb|CCM04294.1| predicted protein [Fibroporia radiculosa]
Length = 707
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 224/496 (45%), Gaps = 126/496 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE---------RDLCINSPTGSGKTLSYALPIVQTLSN 51
+GIS LF VQ AV + P + RDLC+++PTGSGKTL+Y LPIV+ LS
Sbjct: 212 LGISELFAVQTAVVPFLLTPKSLKSLYLPYNPPRDLCVSAPTGSGKTLAYVLPIVEILST 271
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V LRALVVLPTRDL + QV
Sbjct: 272 RIVVRLRALVVLPTRDL---------------------------------------VTQV 292
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
++ F AI GL +G A GQ S E ++L+ ++ ++
Sbjct: 293 RETFEAIGRGRGLKIGTATGQHSFTHEQAQLVADRSSQSVSLFE---------------- 336
Query: 172 ATPGRLMDHINATR-GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD-NENRFSD 229
TR G L HL +LV+DE DRLL +++Q WL VL TR N ++
Sbjct: 337 ------------TRTGSQLMHLRFLVIDEADRLLAQSFQDWLAQVLAATRPPANPEDLTE 384
Query: 230 ASTFLPSAFGSLKTIRRCG---------------VERGFKDKPYPRLVKMVLSATLTQDP 274
+ T ++ +TI R V +K K++ SATLT+DP
Sbjct: 385 SRTLADNSMAR-RTIPRADALAPNYLHLLHDVPRVRTDIDEKRESSCQKLLFSATLTRDP 443
Query: 275 NKLAQLDLHHPLFL--------TTGET-----------RYKLPERLESYKLICESKLKPL 315
+K+ L+LH P + T +T ++ +P L + ++C+S KPL
Sbjct: 444 SKIVALNLHDPKYFVVRGRADGTAADTEEADLMSLVMEKFTMPSSLSEHMIVCDSASKPL 503
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-----------GEL--RIKIKEYSGL 362
L L+ G +VFT S EST RL L F G + I K YS
Sbjct: 504 MLFQLVHGHGVTNALVFTKSAESTTRLMRLFEFFEGAYSGGPDPSGSIPKSIVTKAYSSD 563
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
R L F+ +I +L+ SD ++RG+D+ V++VV+YD P ++ Y+HR GRTAR
Sbjct: 564 LSPGERKLILDKFKNQEIHILICSDLISRGIDISHVSHVVSYDAPIDMRKYVHRVGRTAR 623
Query: 423 AGQLGRCFTLLHKDEV 438
AG+ G +TL+ + EV
Sbjct: 624 AGRAGDAWTLVEEQEV 639
>gi|380018891|ref|XP_003693352.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
Dbp73D-like [Apis florea]
Length = 577
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 220/474 (46%), Gaps = 108/474 (22%)
Query: 2 GISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI+ LFPVQ ++ W E + RD C+++PTGSGKTL+Y LPI+Q L +R V
Sbjct: 130 GINKLFPVQASMISWLLKCNEDRQQKWWLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVP 189
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVV+P ++LA QV VF
Sbjct: 190 KVRCLVVVPVQELA---------------------------------------TQVYKVF 210
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L VGL G S +E ++K E E S VDI++ATPG
Sbjct: 211 VTYTSHTXLKVGLLSGASIFHEEQKNILK------------ESARGEYISIVDIIIATPG 258
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T GF+L +L +LV+DE D+ + +LP D R + F
Sbjct: 259 RLIDHILKTPGFSLNNLQFLVIDEADK--AADWLEYLP--------DPHYRRPRLTLF-- 306
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----- 290
+R C V K++ SATL+QDP KL +L L P+ T+
Sbjct: 307 -------NLRSCEVPAQ----------KLLFSATLSQDPEKLNRLGLFQPILFTSVLVKD 349
Query: 291 -----------GE--TRYKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSS 335
G+ RY P+ L+ + C ++ KP LY + + + K ++FT+S
Sbjct: 350 KDDDVNLDKXIGDFIGRYTSPKELKEQAIECATEYKPAALYHIIINNDITP-KTLIFTNS 408
Query: 336 VESTHRLCTLLNHF-GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
E+THRL LL E I + E S R K L F GKIQ+L+ SDA+ RG+D
Sbjct: 409 GETTHRLTILLQSLLSEKNIVVGELSAQLVSKEREKILNKFINGKIQILICSDALARGVD 468
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+ + V++YD P +I YIHRAGRT RAG+ G ++L +V FK +L A
Sbjct: 469 IPDIQLVISYDLPKHINGYIHRAGRTGRAGKSGTAISILTPKQVGIFKNMLNNA 522
>gi|307209142|gb|EFN86284.1| Probable ATP-dependent RNA helicase Dbp73D [Harpegnathos saltator]
Length = 660
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 215/473 (45%), Gaps = 105/473 (22%)
Query: 2 GISSLFPVQVAV--WQETIGP----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI LFPVQ +V W + G + RD C+++PTGSGKTL+Y LPIVQ L R V
Sbjct: 205 GIVKLFPVQSSVIKWLHSCNKDRRVGWWLRDTCVSAPTGSGKTLAYVLPIVQQLQTRLVP 264
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVVLP ++LA Q++ Y
Sbjct: 265 KIRCLVVLPVQELAAQIHKVMVTYTSH--------------------------------- 291
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L VGL G SS E S +IK+ A Y S VDI++ATPG
Sbjct: 292 ------TNLKVGLLSGISSFEQEQSSIIKKT---ARGNY---------LSTVDIVIATPG 333
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+ HI T GF+L+ L +LV+DE DR WL +LP
Sbjct: 334 RLISHILKTPGFSLDFLRFLVIDEADRTTE-----WL-------------------QYLP 369
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----- 290
F S G + P K++ SATL+QDP KL++L L P+ TT
Sbjct: 370 E-FHSRAHSLTIGNVHSSEIAPAQ---KLLFSATLSQDPEKLSRLGLFQPILFTTVMVTG 425
Query: 291 -----------GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSV 336
GE RY P L + C ++ KPL L LL K +VFT+S
Sbjct: 426 KDTDVNLDKMTGEFAGRYTSPGELTELAVECAAEYKPLALYHLLTRHDTISKTLVFTNSG 485
Query: 337 ESTHRLCTLLNHF-GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
++ HRL L+ E + + E S R L F G+ VL+SSDA+ RG+D+
Sbjct: 486 DTAHRLALLIRSLLSERNVTVGELSAQLMPKQRESVLSKFASGETHVLISSDALARGLDI 545
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
V VV+YD P +IK YIHRAGRT RAG+ G ++L ++ FK++L A
Sbjct: 546 PEVQLVVSYDVPKHIKGYIHRAGRTGRAGKPGTAVSVLTASQIGIFKQMLNGA 598
>gi|383850916|ref|XP_003701020.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Megachile rotundata]
Length = 679
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 216/470 (45%), Gaps = 106/470 (22%)
Query: 2 GISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI+ LFPVQ ++ W E G + RD C+++PTGSGKTL+Y LPIV L +R V
Sbjct: 232 GINKLFPVQASMISWLLKCNEDKQQGWWLRDTCVSAPTGSGKTLAYVLPIVHILQSRLVP 291
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVV+P ++LA QV V
Sbjct: 292 KIRCLVVVPVQELA---------------------------------------AQVYKVM 312
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
A L+V L G SS E S +++ + E SAVDI+VATPG
Sbjct: 313 VAYTSHTNLTVALLSGASSFQQEQSTILRT------------NARGESVSAVDIVVATPG 360
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T F+L L +LV+DE DR+ +D +LP
Sbjct: 361 RLIDHILKTPEFSLSDLRFLVIDEADRV------------------------TDWIDYLP 396
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----- 290
+ + R K P + K++ SATL+QDP KL+ L L P+ TT
Sbjct: 397 EPHNHTPRLTLSNM-RSSK----PPVQKLLFSATLSQDPKKLSHLRLFQPVLFTTVLVTD 451
Query: 291 -----------GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLGEE-KCIVFTSSV 336
G RY PE L + C + KPL L LL K ++FT+S
Sbjct: 452 NDNDVNLDTEAGNYIGRYTGPEGLTERAVECTMEYKPLALYDLLTRNNTIIKTLIFTNSG 511
Query: 337 ESTHRLCTLLNHFGELR-IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
ES HRL LL ++ + + S + R L F G+IQ+L+SSDA+ RGMD+
Sbjct: 512 ESAHRLTILLGSLLAVKNVTVGTLSAQLKPKERENVLGKFITGEIQILISSDALARGMDI 571
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
V V++YD P +IK YIHRAGRT RAG+ G ++L +V FK +L
Sbjct: 572 PDVGLVISYDLPKHIKGYIHRAGRTGRAGKTGIVISILTPKQVGLFKSML 621
>gi|328790575|ref|XP_001122539.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Apis mellifera]
Length = 600
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 217/478 (45%), Gaps = 117/478 (24%)
Query: 2 GISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI+ LFPVQ ++ W E + RD C+++PTGSGKTL+Y LPI+Q L +R V
Sbjct: 154 GINKLFPVQASMISWLLKCNEDRQQKWWLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVP 213
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVV+P ++LA QV VF
Sbjct: 214 KVRCLVVVPVQELA---------------------------------------TQVYKVF 234
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L VGL G S +E ++K E E S VDI++ATPG
Sbjct: 235 VTYTSHTNLKVGLLSGASIFHEEQKNILK------------ESARGEYISIVDIIIATPG 282
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T GF+L L +LV+DE D+ WL +LP
Sbjct: 283 RLIDHILKTPGFSLNDLQFLVIDEADK-----AADWL-------------------EYLP 318
Query: 236 SAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
+L + C + K++ SATL+QDP KL +L L P+ T+
Sbjct: 319 DPHYRRPRLTLLNLHSCEIPAQ----------KLLFSATLSQDPEKLNRLGLFQPILFTS 368
Query: 291 GET-----------------RYKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIV 331
T RY P+ L+ + C ++ KP LY + + + K ++
Sbjct: 369 VLTDKDDDVNLDKEVGDFIGRYTSPKELKEQAIECATEYKPAALYHIIINNDIIP-KTLI 427
Query: 332 FTSSVESTHRLCTLLNHF-GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
FT+S ++THRL LL F E I + E S R K L F GKIQ+L+ SDA+
Sbjct: 428 FTNSGKTTHRLTILLQSFLSEKNIIVGELSAQLVSKEREKILNKFINGKIQILICSDALA 487
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RG+D+ V VV+YD P +I YIHRAGRT RAG+ G ++L +V FK +L A
Sbjct: 488 RGVDIPDVQLVVSYDLPKHINGYIHRAGRTGRAGKSGTAISILTSKQVGIFKHMLNNA 545
>gi|332018269|gb|EGI58874.1| Putative ATP-dependent RNA helicase Dbp73D [Acromyrmex echinatior]
Length = 761
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 216/472 (45%), Gaps = 105/472 (22%)
Query: 2 GISSLFPVQVAV--WQETIGP----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI LFPVQ + W G + +D C+++PTGSGKTL+Y LPIVQ L R V
Sbjct: 314 GIIKLFPVQSNIIKWLHKCNMHRKIGWWPKDTCVSAPTGSGKTLAYVLPIVQELQTRFVP 373
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVVLP ++LA Q++ Y
Sbjct: 374 KIRCLVVLPVQELAAQIHKVMVTYTSH--------------------------------- 400
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L VGL G SS E + +IK K E G + S VDI++ATPG
Sbjct: 401 ------TDLKVGLLSGASSFKQEQNSIIK--KTERG----------QYLSRVDIIIATPG 442
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T GF+L++L +LV+DE DR WL + + + P
Sbjct: 443 RLLDHILKTPGFSLDYLRFLVIDEADRATE-----WLQYLPEF------------HSRPP 485
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-- 293
G++++ + + K++ SATL+QDP KL++L L P TT T
Sbjct: 486 LTLGNMRSSKVIPAQ------------KLLFSATLSQDPEKLSRLGLFQPKLFTTVVTDK 533
Query: 294 ---------------RYKLPERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSVE 337
RY P L + C KP+ L LL K +VFT+S +
Sbjct: 534 DIDINLDKVAGDFIGRYTSPGELTELAVECPPSYKPIVLYQLLTKHDIIPKTLVFTNSGQ 593
Query: 338 STHRLCTLLNHF-GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
HRL L+ E + + E S R L F GKI VL+SSDA+ RG+D+
Sbjct: 594 HAHRLALLMQLLLSEWNVTVGELSAQLASKQREDILSKFANGKIHVLISSDALARGLDIL 653
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
V VV+YD P +IK YIHRAGRT RAG+ G ++L ++V FK++L A
Sbjct: 654 DVQLVVSYDLPKHIKGYIHRAGRTGRAGKSGTAVSILTPNQVGIFKQMLSGA 705
>gi|350416892|ref|XP_003491155.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like [Bombus
impatiens]
Length = 615
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 158/478 (33%), Positives = 215/478 (44%), Gaps = 116/478 (24%)
Query: 2 GISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI+ LFPVQ ++ W + + RD C+++PTGSGKTL+Y LPIVQ L R V
Sbjct: 168 GINKLFPVQASMVSWLLKCDKDRQQNWWLRDTCVSAPTGSGKTLAYVLPIVQILQFRLVP 227
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVV P ++LA+Q+ Y
Sbjct: 228 KVRCLVVAPVQELAMQIYKVMVTYTSH--------------------------------- 254
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L VGL G S+ +E + K E+ E S VDI+VATPG
Sbjct: 255 ------TNLRVGLLSGASAFHEEQRNIRK------------ENDRGEYISLVDIVVATPG 296
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T GF+L+ + +LV+DE D WL +LP
Sbjct: 297 RLIDHILKTSGFSLDDIRFLVIDEAD-----TAADWL-------------------EYLP 332
Query: 236 SAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT- 289
+L +R + K++ SATL+QDP KL +L L HP+ T
Sbjct: 333 EPHYQTPRLTLSNLRSSKIPAQ----------KLLFSATLSQDPEKLNRLGLFHPILFTS 382
Query: 290 ---TGET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIV 331
TG+ RY PE L+ + CE++ KP+ L LL G K +V
Sbjct: 383 VLVTGKDDDVNLDKEAVNFIGRYTSPEELKEEAIECEAEYKPVALYQLLIRDGITSKALV 442
Query: 332 FTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
FT+S + HRL LL + I + E S R L F G IQ+LV SDA+
Sbjct: 443 FTNSGGTAHRLTILLQSLLSKKNIVVGELSAQLVSKEREDILTKFTSGNIQILVCSDALA 502
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RG+D+ V V++YD P +I YIHRAGRT RAG+ G ++L +VK FK +L A
Sbjct: 503 RGVDIPNVQLVISYDLPKHINGYIHRAGRTGRAGKSGTAISILTPKQVKIFKHMLNNA 560
>gi|340711741|ref|XP_003394428.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like [Bombus
terrestris]
Length = 659
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 215/478 (44%), Gaps = 116/478 (24%)
Query: 2 GISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI+ LFPVQ ++ W + + RD C+++PTGSGKTL+Y LPIVQ L R V
Sbjct: 212 GINKLFPVQASMVSWLLKCNKERQQKWWLRDTCVSAPTGSGKTLAYVLPIVQILQFRLVP 271
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+R LVV P ++LA+Q+ Y
Sbjct: 272 KVRCLVVAPVQELAMQIYKVMVTYTSH--------------------------------- 298
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
L VGL G S+ +E + K E+ E S VDI+VATPG
Sbjct: 299 ------TNLRVGLLSGASAFHEEQRNIRK------------ENDRGEYISLVDIVVATPG 340
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T GF+L+ + +LV+DE D WL +LP
Sbjct: 341 RLIDHILKTSGFSLDDIRFLVIDEAD-----TAADWL-------------------EYLP 376
Query: 236 SAFG-----SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
+L +R + K++ SATL+QDP KL +L L HP+ T+
Sbjct: 377 EPHYQTPRLTLSNLRSSKIPAQ----------KLLFSATLSQDPEKLNRLGLFHPILFTS 426
Query: 291 ----------------GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIV 331
G RY PE L+ + CE++ KP+ L L+ G K +V
Sbjct: 427 VLVTDKDDDVNLDKEVGNFIGRYTSPEELKEEAIECEAEYKPVALYQLIIRNGITSKVLV 486
Query: 332 FTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
FT+S + HRL LL + I + E S R L F GKIQ+LV SDA+
Sbjct: 487 FTNSGGTAHRLTILLQSLLSKENIVVGELSAQLVSKEREDILTKFSSGKIQILVCSDALA 546
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RG+D+ V V++YD P +I YIHRAGRT RAG+ G ++L +VK FK +L A
Sbjct: 547 RGVDIPNVQLVISYDLPKHINGYIHRAGRTGRAGKSGTAISILTPKQVKIFKHMLNNA 604
>gi|241751464|ref|XP_002406051.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215506028|gb|EEC15522.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 393
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 204/446 (45%), Gaps = 107/446 (23%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+C+++PTGSGKTL+Y +PIV++L R +R +RA+VVLP ++LA QV +
Sbjct: 4 RDICVSAPTGSGKTLAYVIPIVESLKPRIMRAIRAVVVLPVKELAAQVQA---------- 53
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
VF L L G ++E L+
Sbjct: 54 -----------------------------VFQQYLRGTSLRSQLVTGTKPFSEEQLSLVH 84
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+ + S VDI+VATPGRL+DHI T GF+L L + V+DE DR++
Sbjct: 85 KNA-------------RGYSSLVDIIVATPGRLLDHIRKTPGFSLHLLKFFVLDEADRVI 131
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+ +P V Q K+
Sbjct: 132 EDVRTTLIPEVEQAVEPAQ---------------------------------------KL 152
Query: 265 VLSATLTQDPNKLAQLDLHHP-LFLTTGE-----------TRYKLPERLESYKLICESKL 312
+ SATLTQDP KL L L P LF G+ +Y P+ L + + ++
Sbjct: 153 LYSATLTQDPEKLQSLMLFQPKLFTAAGKRDPAVERAAFAGKYTTPQGLSEFYRVVQNAK 212
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
KPL L L+ + G + FT + + HRLC ++ G +R++ E+S + R++ L
Sbjct: 213 KPLALWDLVANRGYTGTLCFTGTKDDAHRLCLVIKEMGGVRVE--EFSSDLSATERARVL 270
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
+ F G + +LV S+ + RG+DV V NVV YD P Y+KTY+HR GRTARAG G T
Sbjct: 271 RRFASGGLDLLVCSNVLARGLDVANVRNVVCYDPPKYVKTYVHRVGRTARAGVPGTAVTF 330
Query: 433 LHKDEVKRFKKLLQKADNDSCPIHSI 458
L + +++ F+ +L A P+ ++
Sbjct: 331 LRQGQLEAFQTMLSSAGKS--PVEAL 354
>gi|427792293|gb|JAA61598.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 783
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 234/503 (46%), Gaps = 104/503 (20%)
Query: 3 ISSLFPVQ--VAVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 57
I LFPVQ V W E L RD+C+++PTGSGKTL+Y +PI++ L R VR +
Sbjct: 320 IRKLFPVQEKVVPWLLSSEQRRSHLPPRDICVSAPTGSGKTLAYVIPIIEDLKVRVVRAV 379
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
RA+VVLP ++LA QV++ VF
Sbjct: 380 RAVVVLPVKELAAQVHA---------------------------------------VFLQ 400
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
L+V L G + A+E L+++ + S VDI+VATPGRL
Sbjct: 401 YVGTTSLNVQLVTGTRTFAEEQGLLVRKG-------------AKGYASLVDIVVATPGRL 447
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DHI T GF L L Y V+DE DR++ + +P V Q +
Sbjct: 448 LDHIRKTPGFNLHLLKYFVLDEADRVIEDVQTTLIPEVEQ------------------AV 489
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLV-----------KMVLSATLTQDPNKLAQLDLHHP- 285
FG+ K CG + +P V K++ SATLTQDP+KL L L P
Sbjct: 490 FGTSKMNCTCGSTVHNRLCTHPLTVCSLQHCREPVQKLLYSATLTQDPDKLQSLMLFQPK 549
Query: 286 LFLTTGET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 331
LF T +Y P+ L + + KPL + L+ + G +
Sbjct: 550 LFTATAAVSMPGDEQRQKTFVGKYTTPQGLSEFYYLTHDNTKPLAVWDLVANHGFRDTLC 609
Query: 332 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 391
FT+S E HRL +L G +R + E+S + R++ L+ F GK+ +LV S+ + R
Sbjct: 610 FTASKEDAHRLSLVLKEMGSIRAE--EFSAKLSIADRARVLRKFASGKLDILVCSNVLAR 667
Query: 392 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DN 450
G+DV V +V+ YD P +IKTY+HR GRTARAG G T L + +++ FK++L A
Sbjct: 668 GLDVANVRHVICYDPPKFIKTYVHRVGRTARAGVPGTAVTFLRQGQLQAFKEMLSSAGKT 727
Query: 451 DSCPIHSIPSSLIESLRPVYKSG 473
D P+ + +E+L+ Y+
Sbjct: 728 DIQPLDLSNTDELEALQSKYRDA 750
>gi|452825309|gb|EME32306.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 568
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 234/484 (48%), Gaps = 82/484 (16%)
Query: 1 MGISSLFPVQVAV--WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-L 57
+ IS LF Q V + ++ F D+ + +PTG+GKTL YA+ I+ L +R+ R L
Sbjct: 32 LNISKLFRFQWTVIKYLLSLDRSNFPGDVIVQAPTGTGKTLCYAISILTALKSRSSRPRL 91
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
R LV++PTR Y FG I E+ Q S+ F++L D+
Sbjct: 92 RGLVIVPTR------------YLIFAYFGFYDKFLIRELVNQLYSV-FLALIGDDDL--- 135
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+GLS G +S++ E ++ I+ +L CY P VDIL++TP RL
Sbjct: 136 --KVLGLS-----GDTSLSSERTKAIESIQLLEDECYSP-------VWKVDILISTPSRL 181
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPS 236
++HI+ GF + +LV+DETDRLL W+ T+L+ ++RS + + + +L
Sbjct: 182 VEHIHQRVGFEPTTIEFLVLDETDRLLSGQSLDWIETILRHISRSSDVTSSENRNLYLTG 241
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT------- 289
G K IR K++ SAT T KLA L L +P T
Sbjct: 242 ELGLRKPIR-----------------KLLFSATQTSSIAKLANLSLVNPTLFTYKQDDAV 284
Query: 290 ------------TGETRYKLPERLESYKLICESKLKPL-----YLVALLQSLGEEKCIVF 332
+ +Y LP LE + L+C+S ++ L YL L SL E IVF
Sbjct: 285 RSILLGNSSSEKRSKQKYWLPFALEEFVLLCKSPVEKLVSLVWYLKHLDSSLSEAGVIVF 344
Query: 333 TSSVESTHRLCTLLNHF-------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 385
SS S HRL L+ + I I E S R ++ F K+QV+VS
Sbjct: 345 ASSKISAHRLFRFLSLYFSAGYIESNTAIHIAELSSNLSNRQRRNVVRDFSLHKLQVVVS 404
Query: 386 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
SD TRGMD+E + +V+++D P ++KTY+HR GRTARAG G T+L + + F+KLL
Sbjct: 405 SDVATRGMDIENIGHVISFDVPVHVKTYLHRVGRTARAGHKGTGCTILMEHQAHHFRKLL 464
Query: 446 QKAD 449
+K D
Sbjct: 465 RKID 468
>gi|19075832|ref|NP_588332.1| ATP-dependent RNA helicase Dbp6 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74662371|sp|Q76PD3.1|DBP6_SCHPO RecName: Full=ATP-dependent RNA helicase dbp6
gi|3581903|emb|CAA20842.1| ATP-dependent RNA helicase Dbp6 (predicted) [Schizosaccharomyces
pombe]
Length = 604
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 221/479 (46%), Gaps = 101/479 (21%)
Query: 2 GISSLFPVQVAVWQETIGPGL------FERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
I+ F VQ AV + G + D+C+++ TGSGKTLSY +PIVQ LS+R V
Sbjct: 145 NITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVP 204
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
LR +V++PTR+L +QV F
Sbjct: 205 RLRCVVIVPTRELTVQV---------------------------------------AKTF 225
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
GL V GQ S+ E +L E + +D+LV+TPG
Sbjct: 226 EYYMSGAGLQVCAWTGQKSLRHETYQLNG----------------DENECRIDVLVSTPG 269
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFSD-- 229
RL+DHI F+L+HL Y+V+DE DRLL +++Q W+ TV+ N++ D
Sbjct: 270 RLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLD 329
Query: 230 ---ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 286
+ TFLP +L R P P L K+V SATLT+DP+K+A L LH+P
Sbjct: 330 QNISPTFLPD-IDTLLPYRL----------PSP-LQKLVFSATLTRDPSKIASLKLHNPR 377
Query: 287 FLTT----------GETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 331
+ GE + +P L+ Y + S+ KP+ L L+ S +
Sbjct: 378 LVLVQNKDMEVDDGGEIEDDAIVFSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTNILC 436
Query: 332 FTSSVEST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
F S E+ HRL L++ ++ + R K + F G + +LV SD
Sbjct: 437 FVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDL 496
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
M RG+DV NV+NYD P +++Y+HR GRTARAG+ G +TL+ E F KL+++
Sbjct: 497 MARGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLVQSHEGHHFSKLVKQ 555
>gi|158286571|ref|XP_308815.4| AGAP006941-PA [Anopheles gambiae str. PEST]
gi|157020531|gb|EAA04138.4| AGAP006941-PA [Anopheles gambiae str. PEST]
Length = 655
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 233/502 (46%), Gaps = 99/502 (19%)
Query: 1 MGISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
MG LFPVQ V W + P + RD+CI+SPTGSGKTL++A+P+VQ L R
Sbjct: 184 MGFKRLFPVQEKVIPWILEAHQKPAP-FWPRDVCISSPTGSGKTLAFAVPVVQLLLKRVA 242
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
+RALV+LP + E+ Q +F Q+ D
Sbjct: 243 PAIRALVILP----------------------------VQELAEQ----VFQVFRQLCD- 269
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
I P V LS G+ + E +L+K E Y P+ VDI+V T
Sbjct: 270 GTNIHPVV-LSRGM-----QLEVEQQKLVKYCNGE----YMPK---------VDIVVTTA 310
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL++H+++T+GFTL HL +L+VDE D+++ + WL + + + +++ + L
Sbjct: 311 GRLIEHLHSTKGFTLRHLRFLIVDEADKVMNQIQNDWLYHLNKHVKHESDEYLLGRTADL 370
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT----- 289
S R +P+ K++ SAT +D KL L L HP T
Sbjct: 371 LSQSELFDRAR----------QPH----KLLFSATFKRDAEKLKTLKLFHPKLFTAVIDP 416
Query: 290 ---------TGETR------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEK 328
T T+ Y P L+ + E + KPL L L++ G K
Sbjct: 417 QERTMMAQSTATTQAAEPRRGNFAGQYTTPAELKECICLTEQRSKPLTLYGLIRENGYRK 476
Query: 329 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
+VFT+ + ++HRL +L + I+E+S + R L F GK+ ++ +DA
Sbjct: 477 FLVFTNGINTSHRLSFVLQRLFGTDMVIEEWSSSLSPATRKSVLNRFSLGKVNGIICTDA 536
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+ RG+D+E + V++YD P +I YIHR GRTARAG G TLL +DE K+F LL++A
Sbjct: 537 LARGIDIENIEVVISYDMPNHIDKYIHRIGRTARAGLRGTAITLLAEDEKKKFNALLKEA 596
Query: 449 DNDSCPIHSIPSSLIESLRPVY 470
+ + SL E Y
Sbjct: 597 NKRELETMEVSPSLEEEFAAKY 618
>gi|164656042|ref|XP_001729149.1| hypothetical protein MGL_3616 [Malassezia globosa CBS 7966]
gi|159103039|gb|EDP41935.1| hypothetical protein MGL_3616 [Malassezia globosa CBS 7966]
Length = 730
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 211/449 (46%), Gaps = 91/449 (20%)
Query: 1 MGISSLFPVQVAVWQETIG---------PGLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
+GI F VQ AV + P RDLCI++PTGSGKTL+Y +PI++ L
Sbjct: 233 LGIREWFAVQGAVIPALLRDVHAHHLYLPYAPPRDLCISAPTGSGKTLAYVVPIIEVLHK 292
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R + LRAL+++PTRDLA+QV
Sbjct: 293 RTIPQLRALILVPTRDLAVQV--------------------------------------- 313
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+DV A+ GL + G S E +L++ DV + S DIL+
Sbjct: 314 RDVLEAVGKGSGLRYAMITGNHSFRHEQDQLVR----------SDSDVNR---SPTDILI 360
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DH+ TRGFTLEHL YLV+DE DRLL +++Q W+PT+L E R +
Sbjct: 361 ATPGRLVDHLRGTRGFTLEHLRYLVIDEADRLLGQSFQQWVPTLLDAL----EPRPHSGT 416
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-- 289
PS + R P + K++ SATLT+DP K+ L L P F+
Sbjct: 417 CAPPSLWEEAGQEHNHTWTRDDMQVPQASVQKLLFSATLTRDPAKVGALRLRQPQFIRVR 476
Query: 290 ----------TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE-----KCIVFTS 334
E + LP L+ + L+ + K LYL+ LL + + + FT
Sbjct: 477 DPGISDGQGLVHEQHFALPAGLQQHMLVAPTSQKVLYLLHLLHTPSADTEPLRHALCFTK 536
Query: 335 SVESTHRLCTLLNHFGEL--------RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 386
SVE+ +RL L+ F E ++++ YS R + L+ F+ G I +LV S
Sbjct: 537 SVETANRLVRLVAFFEEAWSRHTNTPALQVRFYSSDLGTGERIQLLRDFQHGHIDLLVCS 596
Query: 387 DAMTRGMDVEGVNNVVNYDKP-AYIKTYI 414
D + RG+D+ V +V++YD P ++ TYI
Sbjct: 597 DLIARGIDLPHVRHVISYDVPLIWLNTYI 625
>gi|170032268|ref|XP_001844004.1| ATP-dependent RNA helicase DDX51 [Culex quinquefasciatus]
gi|167872120|gb|EDS35503.1| ATP-dependent RNA helicase DDX51 [Culex quinquefasciatus]
Length = 695
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 236/492 (47%), Gaps = 107/492 (21%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTGSGKTLSYALPIVQTLS 50
+G LFPVQ ET+ P + + RD+CI+SPTGSGKTL++A+P+VQ L
Sbjct: 159 LGFKRLFPVQ-----ETVIPWILDAHQKPTPFWPRDVCISSPTGSGKTLAFAVPVVQLLL 213
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
NR +RALV+LP ++LA QV FG
Sbjct: 214 NRIAPAIRALVILPVKELAEQV------------FG------------------------ 237
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
VF + + L + + + E S+L+ R E Y P+ VDI+
Sbjct: 238 ---VFEKLCEGTKIRPLLLSRKQTFSVEQSKLVARFNGE----YIPK---------VDIV 281
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
V T GRL++H+++T GFTL+HL +L++DE DR++ + WL + + + +++
Sbjct: 282 VTTAGRLVEHLHSTTGFTLKHLRFLIIDEADRVMDQIQNDWLYHLNKHVKQESDE----- 336
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
L A G L + DKP + K++ SATL+QDP KL L HP T
Sbjct: 337 -YLLGRAAGQLS-------QSELFDKPR-QPHKLLFSATLSQDPEKLNTFKLFHPKLFTA 387
Query: 291 ------------------GETR------YKLPERLESYKLICESKLKPLYLVALLQSLGE 326
E R Y P L + + K+KPL L AL++ G
Sbjct: 388 VSDPAKRLAALVRHHQQAEEKRGKFIGQYATPMELRELVCMTQFKIKPLTLFALIKENGY 447
Query: 327 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 386
++ + FT+S++ +HRL +L + I+E+S R L F GK+ ++ +
Sbjct: 448 KRFLCFTNSIDGSHRLSFVLQKMFGTELVIEEWSSSLSPQARKSVLSRFALGKVNGIICT 507
Query: 387 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
DA+ RG+D++ ++ V++YD P +I TYIHR GRT RAG G T+L +E K+F+ L
Sbjct: 508 DALARGIDIDDIDVVISYDMPRHINTYIHRIGRTGRAGNRGTSITMLIDEERKKFQSTLA 567
Query: 447 KADNDSCPIHSI 458
+A P+ SI
Sbjct: 568 EAGKQ--PLESI 577
>gi|193596603|ref|XP_001949748.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Acyrthosiphon pisum]
Length = 528
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 228/502 (45%), Gaps = 104/502 (20%)
Query: 2 GISSLFPVQ--VAVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
G + FPVQ + W + + RDLCI++PTGSGKTLSY LPI+QTL +
Sbjct: 67 GCTHFFPVQNQLVPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQ 126
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
LRAL+VLPT+DLA+QV Y
Sbjct: 127 LRALIVLPTKDLAVQVYKVFLYY------------------------------------- 149
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
I A L V L ++ ++ E I + YD +L VDI+V TPGR
Sbjct: 150 -IKNAFDLRVLLLESKNMTLEKEKERI--------VQYDSSIGWIDL---VDIIVTTPGR 197
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ T GF+L++L +LV+DE D WL ++ +D+ +
Sbjct: 198 LVDHLYYTEGFSLKNLRFLVLDEADSFTNILQNEWL------------HKVNDSLAYNGP 245
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFL------- 288
+L T+ D P R +++ SATLTQDP KL L L P LF
Sbjct: 246 TKCTLNTLN---------DSPQ-RTQRLLFSATLTQDPEKLKFLKLFEPKLFTSIIKRKN 295
Query: 289 ------TTGET---------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
TTG +Y P+ L+ Y ++C + KPL L L++S G ++ I F
Sbjct: 296 TQLPTDTTGTDEPVRGDFVGKYTTPKELKEYMVLCPEENKPLTLYHLIRSKGLKRVICFV 355
Query: 334 SSVESTHRLCTLLNHFGELR-----IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
S HRL LL E +++ E S Q S +K F GKI VL+ +D+
Sbjct: 356 KSKIEVHRLTRLLCKLSEFDTNNSPLRVNEISSDVTQKAHSGYIKQFSNGKIDVLICTDS 415
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+ RG+D+E ++ V+ Y+ P Y K YIHR GRTARAG G+ T + + + F+ +L A
Sbjct: 416 LARGIDIELISCVILYNVPKYPKNYIHRIGRTARAGHKGKAITFVTPEHKELFENVLNSA 475
Query: 449 DNDSCPIHSIPSSLIESLRPVY 470
S + S +E +Y
Sbjct: 476 GKTSLKNMKVDISDLEQYEQMY 497
>gi|328702076|ref|XP_001949723.2| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Acyrthosiphon pisum]
Length = 528
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 227/502 (45%), Gaps = 104/502 (20%)
Query: 2 GISSLFPVQ--VAVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
G + FPVQ + W + + RDLCI++PTGSGKTLSY LPI+QTL +
Sbjct: 67 GCTHFFPVQNQLVPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQ 126
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
LRAL+VLPT+DLA QV Y
Sbjct: 127 LRALIVLPTKDLAAQVYKVFLYY------------------------------------- 149
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
I A L V L ++ ++ E I + YD +L VDI+V TPGR
Sbjct: 150 -IKNAFDLRVLLLESKNMTLEKEKERI--------VQYDSSIGWIDL---VDIIVTTPGR 197
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ T GF+L++L +LV+DE D WL ++ +D+ +
Sbjct: 198 LVDHLYYTEGFSLKNLRFLVLDEADSFTNILQNEWL------------HKVNDSLAYNGP 245
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFL------- 288
+L T+ D P R +++ SATLTQDP KL L L P LF
Sbjct: 246 TKCTLNTLN---------DSPQ-RTQRLLFSATLTQDPEKLKFLKLFEPKLFTSIIKRKN 295
Query: 289 ------TTGET---------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
TTG +Y P+ L+ Y ++C + KPL L L++S G ++ I F
Sbjct: 296 TQLPTDTTGTDEPVRGDFVGKYTTPKELKEYMVLCPEENKPLTLYHLIRSKGLKRVICFV 355
Query: 334 SSVESTHRLCTLLNHFGELR-----IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
S HRL LL E +++ E S Q S +K F GKI VL+ +D+
Sbjct: 356 KSKIEVHRLTRLLCKLSEFDTNNSPLRVNEISSDVTQKAHSGYIKQFSNGKIDVLICTDS 415
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+ RG+D+E ++ V+ Y+ P Y K YIHR GRTARAG G+ T + + + F+ +L A
Sbjct: 416 LARGIDIELISCVILYNVPKYPKNYIHRIGRTARAGHKGKAITFVTPEHKELFENVLNSA 475
Query: 449 DNDSCPIHSIPSSLIESLRPVY 470
S + S +E +Y
Sbjct: 476 GKTSLKNMKVDISDLEQYEQMY 497
>gi|195997819|ref|XP_002108778.1| hypothetical protein TRIADDRAFT_52102 [Trichoplax adhaerens]
gi|190589554|gb|EDV29576.1| hypothetical protein TRIADDRAFT_52102 [Trichoplax adhaerens]
Length = 625
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 207/429 (48%), Gaps = 109/429 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFE-------------RDLCINSPTGSGKTLSYALPIVQT 48
G+S LFPVQ TI P + + D+C+++PTGSGKTL Y LPI+Q
Sbjct: 203 GMSHLFPVQ-----STIIPTILKDYQHFGLCTPLPVHDICVSAPTGSGKTLVYVLPIIQV 257
Query: 49 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 108
L R+V LRAL+++PT DLA QV
Sbjct: 258 LMRRSVMLLRALILVPTADLAYQV------------------------------------ 281
Query: 109 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 168
K VF GL + A+GQ + E ELI D L +S VD
Sbjct: 282 ---KKVFEQFNEGSGLKIATAIGQRNFKIEQGELI--------------DALGG-RSNVD 323
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
IL+ATPGRL+DHIN T+ FTLEHL +LV+DE D+LL ++ + + L+ +
Sbjct: 324 ILIATPGRLIDHINMTKHFTLEHLRFLVLDEADKLLISSHHQLIMSALKACYK------A 377
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV-----------KMVLSATLTQDPNKL 277
+ S +P L T R D P P +V K++ SATLT DP KL
Sbjct: 378 EQSQIIPPNKFILHTTPR--------DPPIPSIVSKYCNNKLPLQKLLFSATLTYDPEKL 429
Query: 278 AQLDLHHPLF---------LTTGETRYKL-PERLESYKLICESKLKPLYLVALLQSLGEE 327
A L+L PL L+T E Y + P L Y +ICE KPL ++ +Q+L
Sbjct: 430 APLELFSPLLYQISDQKSNLSTNEIDYYVTPAELTEYYIICEPGEKPLTIIHFMQALKHL 489
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
+ + FT+S EST RL LL+ FG++R+ S + R+ R + +K F G+I +L+ SD
Sbjct: 490 RVLCFTNSKESTKRLSLLLSIFGDIRVATLS-SEVPRKD-RKRIIKQFSSGEIDLLICSD 547
Query: 388 AMTRGMDVE 396
+ RG+D+E
Sbjct: 548 TVARGIDIE 556
>gi|294949064|ref|XP_002786034.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
gi|239900142|gb|EER17830.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
Length = 559
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 224/490 (45%), Gaps = 122/490 (24%)
Query: 1 MGISSLFPVQVAVWQETIG------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
MGIS LFPVQ V +G ++ DLC+ PTG GKTL Y LPI Q LS+R
Sbjct: 91 MGISRLFPVQATVLPIVLGRVRTPVGSRYDCDLCVAVPTGQGKTLGYLLPIFQLLSHRKY 150
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
+ LRALV+ PTRDLALQV +ADH KD
Sbjct: 151 QTLRALVLAPTRDLALQVKE-------------VADHFTGG----------------KDN 181
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
F V VGQ A +E E G P D+LVATP
Sbjct: 182 F---------KVDCVVGQYH-AQTFAE-------EDGSSAGP-----------DVLVATP 213
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
R +D I R ++ + ++V+DE DRLL + +A + V R +AS
Sbjct: 214 SRALDLITGER-VPVDGIRWMVLDEADRLLNSSREATVEVV---------RRVMEAS--- 260
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET- 293
PR +M+ SAT+T +P KLAQL L P FL + +T
Sbjct: 261 ------------------------PRCQRMLFSATMTSNPQKLAQLALSRPFFLLSTQTG 296
Query: 294 RYKLPERLESYKLICES-KLKPLYLVALL-------QSLGEEKCIVFTSSVESTHRL--- 342
+ PE L ++ + + KP LV++L S + ++F SVE HRL
Sbjct: 297 AHATPENLRHRFVVARAEQKKPGVLVSILGEIYPPTASEATSRTMIFCGSVEHAHRLTRL 356
Query: 343 ---CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
C + N + IKI+E+S Q R + L+AFR G+I VLV SD RG+D V+
Sbjct: 357 LQICVVGNENIKEGIKIREFSAALNQKQRVRLLEAFRTGRIHVLVCSDVAARGLDFREVD 416
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
+V+ YD P ++ YIHR GR RAG+ G T+L +VK FK +L++ + ++
Sbjct: 417 HVLQYDVPNNVQGYIHRCGRAGRAGRQGCSSTILVGKQVKHFKDMLREEE-------AVT 469
Query: 460 SSLIESLRPV 469
+E ++PV
Sbjct: 470 MDKLEQMKPV 479
>gi|152013488|sp|A2QA23.1|DBP6_ASPNC RecName: Full=ATP-dependent RNA helicase dbp6
gi|134055529|emb|CAK37175.1| unnamed protein product [Aspergillus niger]
Length = 593
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 221/453 (48%), Gaps = 88/453 (19%)
Query: 19 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 78
GP DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+
Sbjct: 158 GPTNHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREA-CE 216
Query: 79 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 138
C A GL V AVG +I DE
Sbjct: 217 LC--------------------------------------AAGSGLRVASAVGNVAIKDE 238
Query: 139 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 198
E + G + E VDIL+ TPGRL+DH+ T+GFTL++L +LV+D
Sbjct: 239 QRESL------PGYVHRSE-------PNVDILICTPGRLVDHLRYTKGFTLKNLEWLVID 285
Query: 199 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKP 257
E DRLL E++Q W+ V+ S + P AFG S + G+ K+
Sbjct: 286 EADRLLNESFQEWVDVVMT----------SLDARKAPDAFGFSGNFLSGLGLPIQSKE-- 333
Query: 258 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----------------ETRYKLPERL 301
PR K+VLSAT+T+D KL L L +P + G + ++ LP L
Sbjct: 334 -PR--KVVLSATMTRDVTKLNSLRLANPKLVVIGSDAAATEDESGGVAPSDEQFTLPPTL 390
Query: 302 ESYKL-ICESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIK 357
E + + + + KPLYL+ LL S E K +VFT S ES RL LL L +I
Sbjct: 391 EEHTVSVGDGSQKPLYLLRLLLSHIKLETKILVFTKSSESASRLARLLALLEPSLSDRIG 450
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
+ S KTL A+R GKI V++++D +RG+D+ + +VVNYD PA I TY+HR
Sbjct: 451 TIIKSNKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRV 510
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
GRTARAGQ G +TL+ E K F + K +
Sbjct: 511 GRTARAGQKGSAWTLVAHREGKWFASQIAKGSD 543
>gi|157820497|ref|NP_001100620.1| ATP-dependent RNA helicase DDX51 [Rattus norvegicus]
gi|149063713|gb|EDM14036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 601
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 226/500 (45%), Gaps = 128/500 (25%)
Query: 2 GISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSN 51
GISS FPVQ AV +G G ++ DLC+++PTGSGKTL++ +P+VQ L +
Sbjct: 185 GISSYFPVQAAVIPALLESADNGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLH 244
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RALVVLPT++LA QV+ +F + D
Sbjct: 245 RVVCHIRALVVLPTKELAQQVS---------KVFNIYTD--------------------- 274
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
L V L GQ S+A E L++ K G C DI+V
Sbjct: 275 ---------TTPLRVALVTGQKSLAKEQESLVQ--KTADGFC-----------CLADIVV 312
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
ATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ A+
Sbjct: 313 ATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AA 360
Query: 232 TFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+ GS ++R V P L K++ SATLTQ+P KL +L L+ P
Sbjct: 361 FYTEDPTGSCALLQRTQPQAVTAASTCIPQMPLQKLLFSATLTQNPEKLQRLGLYQPRLF 420
Query: 289 TT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
+T +Y P L + + C KPL + L+ + + + FT
Sbjct: 421 STRLGHQSPRDTVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVFHLVLGMNFSRALCFT 480
Query: 334 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
+S E++HRL L FG + + E+S R K LK F +GKIQ++
Sbjct: 481 NSRENSHRLFLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLV---------- 528
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 453
GRTARAG+ G+ FTLL K + ++F +++ +A
Sbjct: 529 ------------------------GRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPEL 564
Query: 454 PIHSIPSSLIESLRPVYKSG 473
H +P L++ L Y++
Sbjct: 565 ACHEVPRKLLQPLVARYETA 584
>gi|213407706|ref|XP_002174624.1| ATP-dependent RNA helicase dbp6 [Schizosaccharomyces japonicus
yFS275]
gi|212002671|gb|EEB08331.1| ATP-dependent RNA helicase dbp6 [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 223/474 (47%), Gaps = 115/474 (24%)
Query: 15 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 74
Q PG DLC+++ TGSGKTL+Y LPI++ L V LR VV+PT++L +QV
Sbjct: 127 QRAHAPG----DLCVSAATGSGKTLAYVLPIIECLRTCIVTRLRCAVVVPTKELVVQVAK 182
Query: 75 ARCKYCCKN---IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ +YC + L S+A F+ LF+S P KD A
Sbjct: 183 SFEQYCSGTKLRVCALTGQRSLA-----FEQSLFLS-PNGKDYIA--------------- 221
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
DI+V TPGR +DHI +T FTL+H
Sbjct: 222 ------------------------------------DIMVTTPGRFVDHIRSTPNFTLQH 245
Query: 192 LCYLVVDETDRLLREAYQAWL---------PTVLQ------------LTRSDNENRFSDA 230
L YLVVDE DRLL +++Q W+ P VLQ L +D+ + + A
Sbjct: 246 LRYLVVDEADRLLDQSFQGWVNAVMEELERPKVLQGIDMHGLSGIERLPGADSNSGCNIA 305
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
ST+LP+ + T+ K P L K+V SATLT++P K++ L L P L
Sbjct: 306 STYLPN----MPTL--------LPQKTAPCLQKLVFSATLTRNPAKISALRLVRPRLLVV 353
Query: 291 GETR--------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
+ + LP L+ + + ++ KPL L LL++ + + FT S
Sbjct: 354 QDPSVSMEPDGDEEDTVLFSLPAALQEHHVGVTAE-KPLLLYHLLRTQQLQNTLCFTKSN 412
Query: 337 EST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
ES +RL LL+ +++ ++G+ ++ R + L F E +Q+LV SD M RG+
Sbjct: 413 ESAARLYRLLELLDKGSSEPLRVGLFAGILTRADRRRILTQFAESNLQLLVCSDLMARGV 472
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
D+ NV+NYD P+ + Y+HR GR ARAG+ G +TL+ E F ++++
Sbjct: 473 DLPSTENVINYDPPSGTRQYVHRIGRCARAGREGHAWTLVQDHEGFHFSSIVRR 526
>gi|294901652|ref|XP_002777458.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
gi|239885094|gb|EER09274.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
Length = 559
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 222/490 (45%), Gaps = 122/490 (24%)
Query: 1 MGISSLFPVQVAVWQETIG------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
MGIS LFPVQ V +G ++ DLC+ PTG GKTL Y LPI Q LS+R
Sbjct: 91 MGISRLFPVQATVLPIVLGRVRTPVGSRYDCDLCVAVPTGQGKTLGYLLPIFQLLSHRKY 150
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
+ LRALV+ PTRDLALQV +ADH KD
Sbjct: 151 QTLRALVLAPTRDLALQVKE-------------VADHFTGG----------------KDS 181
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
F V VGQ A +E E G P D+LVATP
Sbjct: 182 F---------RVDCVVGQYH-AQTFAE-------EDGSSAGP-----------DVLVATP 213
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
R +D I R ++ + ++V+DE DRLL + +A + V R +AS
Sbjct: 214 SRALDLITGER-VPVDGIRWMVLDEADRLLNSSREATVEVV---------RRVMEAS--- 260
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET- 293
PR +M+ SAT+T +P KLAQL L P FL +T
Sbjct: 261 ------------------------PRCQRMLFSATMTSNPQKLAQLALSRPFFLLGTQTG 296
Query: 294 RYKLPERLESYKLICES-KLKPLYLVALL-------QSLGEEKCIVFTSSVESTHRLCTL 345
+ PE L ++ + + KP LV++L S + ++F SVE HRL L
Sbjct: 297 AHATPENLRHRFVVARAEQKKPGVLVSILGEIYPPTASEATSRTMIFCGSVEHAHRLARL 356
Query: 346 L------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
L N + IKI+E+S Q R + L+AFR G+I VLV SD RG+D V+
Sbjct: 357 LQIYVVGNENIKEGIKIREFSAALNQKQRVRLLEAFRTGRIHVLVCSDVAARGLDFREVD 416
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
+V+ YD P ++ YIHR GR RAG+ G T+L +VK FK +L++ ++
Sbjct: 417 HVLQYDVPNNVQGYIHRCGRAGRAGREGCSSTILVGKQVKHFKDMLREE-------KAVT 469
Query: 460 SSLIESLRPV 469
+E ++PV
Sbjct: 470 MDKLEQMKPV 479
>gi|167536143|ref|XP_001749744.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771892|gb|EDQ85553.1| predicted protein [Monosiga brevicollis MX1]
Length = 2519
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 217/447 (48%), Gaps = 98/447 (21%)
Query: 3 ISSLFPVQ-------VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
+ +LFP+Q +A W PG D C+ +PTGSGKTL Y LPI+ L+ R
Sbjct: 191 MKTLFPLQRAMVPRLIASWNAAGHPG----DFCVCAPTGSGKTLCYLLPILHLLAERVTP 246
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RAL+VLPTR LALQV +++ G +++C + L +L
Sbjct: 247 RIRALIVLPTRQLALQV-----VRVARDLLG------ASQLCAGREPLRVAAL------- 288
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
GQ+S++ E + +LQE ++DI+VATPG
Sbjct: 289 --------------TGQTSLSQE------------------QKLLQE--QSIDIVVATPG 314
Query: 176 RLMDHINATRGFTLEHL--CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
RL+DH++ T G + L C+ + LL ++YQ+WL + + E+ SD
Sbjct: 315 RLVDHLHQT-GKEMGALGACFQPI-----LLTQSYQSWLEALRKALYRGRES--SDPMNM 366
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+ F + T RL +++ SATLT+DP KL L L P +
Sbjct: 367 TLTRFHAEGT----------------RLQQLLFSATLTRDPEKLEPLRLAFPTMVIASSA 410
Query: 294 -------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 346
+ +P ++ Y + C + +PL L++LL ++ ++F S++ + R+ LL
Sbjct: 411 HQDDANGKSTIPRSIDEYTVSCTATERPLVLLSLLIGFQMQRVLIFVSALNTAKRVTALL 470
Query: 347 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 406
+F EL + E S Q Q ++ LK F G++ VLV SD M RG+D++ V V++YD
Sbjct: 471 QYFDEL--SVAEVSSSQSQQENTRALKQFAAGELSVLVCSDNMARGIDIKNVETVISYDA 528
Query: 407 PAYIKTYIHRAGRTARAGQLGRCFTLL 433
PA+ KTYIHR GR RAG G +TL+
Sbjct: 529 PAFPKTYIHRVGRVGRAGAHGEAYTLV 555
>gi|1749726|dbj|BAA13920.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 490
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 217/479 (45%), Gaps = 101/479 (21%)
Query: 2 GISSLFPVQVAVWQETIGPGL------FERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
I+ F VQ AV + G + D+C+++ TGSGKTLSY +PIVQ LS+R V
Sbjct: 31 NITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVP 90
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
LR +V++PTR+L +QV F
Sbjct: 91 RLRCVVIVPTRELTVQV---------------------------------------AKTF 111
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
GL V GQ S+ E +L E + +D+LV+TPG
Sbjct: 112 EYYMSGAGLQVCAWTGQKSLRHETYQLNG----------------DENECRIDVLVSTPG 155
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFSD-- 229
RL+DHI F+L+HL Y+V+DE DRLL +++Q W+ TV+ N++ D
Sbjct: 156 RLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLD 215
Query: 230 ---ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 286
+ TFLP +L R P P L K+V SATLT+DP+K+A L LH+P
Sbjct: 216 QNISPTFLPD-IDTLLPYRL----------PSP-LQKLVFSATLTRDPSKIASLKLHNPR 263
Query: 287 FLTT----------GETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 331
+ GE +P L+ Y + S+ KP+ L L+ S +
Sbjct: 264 LVLVQNKDMEVDDGGEIEDDAIVLSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTNILC 322
Query: 332 FTSSVEST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
F S E+ HRL L++ ++ + R K + F G + +LV SD
Sbjct: 323 FVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISWFATGDLNLLVCSDL 382
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
M RG+ NV+NYD P +++Y+HR G TARAG+ G +TL+ E F KL+++
Sbjct: 383 MARGIHFSNTQNVINYDPPFSVRSYVHRIGPTARAGREGFAWTLVQSHEGHHFSKLVKQ 441
>gi|256075757|ref|XP_002574183.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 837
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 225/520 (43%), Gaps = 138/520 (26%)
Query: 1 MGISSLFPVQVAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+GI+ FPVQ AV + P RD+CI +PTGSGKTL+YA+PI+Q NR
Sbjct: 70 IGITHFFPVQSAVIPYMLDCYFTSKHRPLCRPRDICICAPTGSGKTLAYAVPIIQLFLNR 129
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
R +RAL+++P RDLA+QV
Sbjct: 130 VHRFIRALIIVPVRDLAVQVYKT------------------------------------- 152
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
F+ + + VG+ G S + E ++I + VDI++A
Sbjct: 153 --FSQLVNGTDIQVGVLAGIKSFSKEQEDIINLTNESYSV-------------KVDIVIA 197
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL----TRSDNENRFS 228
TPGRL+DH+ T GF++E L LV+DE DR++ E Q W T+ + T S N+N +S
Sbjct: 198 TPGRLVDHLYNTPGFSMERLRILVIDEADRVIVEEKQNWYHTLEDVLYYYTSSTNQNSWS 257
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPR-----LVKMVLSATLTQDPNKLAQLDLH 283
+ S S + I G Y R L K+++SATLT DP L Q +L+
Sbjct: 258 NVSVRKRS-----RPIPTVGYH-------YDRSVDITLQKILVSATLTHDPEPLKQFNLY 305
Query: 284 HPLFLTTGETRY--------------------------------KLPERLESYK------ 305
P+ T+ R+ ++P + K
Sbjct: 306 FPILFTSNRIRHDENHIDAVPHDHKNAENNSSEIKKQEKCDENREIPNVISHVKSSENHT 365
Query: 306 -------LICES------KLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNH 348
++ ES KP V L L +K + F ++V+ RL LL
Sbjct: 366 TAGVGQFMVPESLEEFLVTAKPDIRVLFLVYLVRQKHKKRILCFANTVDCAKRLNMLLAS 425
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
F IK K S R + L F G+ Q+LV +D+M RG+D+ V VV+YD P
Sbjct: 426 FKG--IKSKFLSSHLHPDKRQRILNLFSVGQCQILVCTDSMARGIDINDVECVVSYDVPP 483
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
IK YIHR GRTARAG+ G + LL ++ FKK L+ A
Sbjct: 484 SIKIYIHRIGRTARAGKKGTAYNLLSTNQFYHFKKDLKLA 523
>gi|353232410|emb|CCD79765.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 603
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 222/520 (42%), Gaps = 138/520 (26%)
Query: 1 MGISSLFPVQVAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+GI+ FPVQ AV + P RD+CI +PTGSGKTL+YA+PI+Q NR
Sbjct: 70 IGITHFFPVQSAVIPYMLDCYFTSKHRPLCRPRDICICAPTGSGKTLAYAVPIIQLFLNR 129
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
R +RAL+++P RDLA+QV
Sbjct: 130 VHRFIRALIIVPVRDLAVQVYKT------------------------------------- 152
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
F+ + + VG+ G S + E ++I + VDI++A
Sbjct: 153 --FSQLVNGTDIQVGVLAGIKSFSKEQEDIINLTNESYSV-------------KVDIVIA 197
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL----TRSDNENRFS 228
TPGRL+DH+ T GF++E L LV+DE DR++ E Q W T+ + T S N+N +S
Sbjct: 198 TPGRLVDHLYNTPGFSMERLRILVIDEADRVIVEEKQNWYHTLEDVLYYYTSSTNQNSWS 257
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPR-----LVKMVLSATLTQDPNKLAQLDLH 283
+ S S + I G Y R L K+++SATLT DP L Q +L+
Sbjct: 258 NVSVRKRS-----RPIPTVGYH-------YDRSVDITLQKILVSATLTHDPEPLKQFNLY 305
Query: 284 HPLFLTTGETRY--------------------------KLPERLESYKLICESK------ 311
P+ T+ R+ K E E +I K
Sbjct: 306 FPILFTSNRIRHDENHIDAVPHDHKNAENNSSEIKKQEKCDENREIPNVISHVKSSENHT 365
Query: 312 -------------------LKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNH 348
KP V L L +K + F ++V+ RL LL
Sbjct: 366 TAGVGQFMVPESLEEFLVTAKPDIRVLFLVYLVRQKHKKRILCFANTVDCAKRLNMLLAS 425
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
F IK K S R + L F G+ Q+LV +D+M RG+D+ V VV+YD P
Sbjct: 426 FKG--IKSKFLSSHLHPDKRQRILNLFSVGQCQILVCTDSMARGIDINDVECVVSYDVPP 483
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
IK YIHR GRTARAG+ G + LL ++ FKK L+ A
Sbjct: 484 SIKIYIHRIGRTARAGKKGTAYNLLSTNQFYHFKKDLKLA 523
>gi|169598424|ref|XP_001792635.1| hypothetical protein SNOG_02017 [Phaeosphaeria nodorum SN15]
gi|111069109|gb|EAT90229.1| hypothetical protein SNOG_02017 [Phaeosphaeria nodorum SN15]
Length = 648
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 224/483 (46%), Gaps = 95/483 (19%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL---ALQVNSARC---KY 79
D+C+++ TGSGKTL+Y LPI++ L +RAV L A+VV+P+R L ALQV C K
Sbjct: 198 DICVSAKTGSGKTLAYLLPIIEALKDRAVPTLSAIVVVPSRQLVNQALQVAEDLCAGTKI 257
Query: 80 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 139
G A AE Q V ++ P A G + +
Sbjct: 258 KVGTALGNTAFPPDAEAAGQ--------------VEGSVPPH-------AAGAKDLHERA 296
Query: 140 SELIKRPKLEAGICYD-----PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 194
S+ + +E G D P+D + + S VDIL+ TPGRL++HI T GF L + +
Sbjct: 297 SQQFRTGFVEKGGILDDLMNMPQDHIPQYDSGVDILICTPGRLVEHIEHTTGFLLNSVRW 356
Query: 195 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL-------PSAFGSLKTIRRC 247
LV+DE D+LL + +Q W ++ + F +A L S + ++ RR
Sbjct: 357 LVIDEADQLLNQNFQGWASVLMDALHGETPVDFMNAQERLLKRERDANSMWSAILPARR- 415
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF------------LTTGETRY 295
+L K+VLSAT+ +D KL L L P L + +
Sbjct: 416 ------------QLTKIVLSATMEKDLTKLGTLRLKRPKLVVVQDEATEVQPLDHEDNNF 463
Query: 296 KLPERLESYKL-ICESKLKPLYLVALLQSL-------GEE---------------KCIVF 332
+LP L+ + + + + KPL+L+ +L + GE + +VF
Sbjct: 464 ELPSTLDEFSVHVADGSNKPLHLLYVLLNYVFTGIETGENNEDEDSETGVAEHPSRVLVF 523
Query: 333 TSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 391
T S E+ RL LL + +K + K LK+F G+I++L++SDA +R
Sbjct: 524 TKSTENASRLSHLLATLAPAFKNHLKTMTRALTAEASRKLLKSFGTGEIKILIASDAASR 583
Query: 392 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL----GRCFTLLHKDEVKRFKKLLQK 447
G+D+ + +V+NYD P I +Y+HR GRTARAG+ GRC K E F K + K
Sbjct: 584 GLDIPDITHVINYDMPTSITSYVHRVGRTARAGKSGGKHGRCSP---KTEAAWFIKQITK 640
Query: 448 ADN 450
D+
Sbjct: 641 GDS 643
>gi|336467903|gb|EGO56066.1| hypothetical protein NEUTE1DRAFT_83030 [Neurospora tetrasperma FGSC
2508]
gi|350289862|gb|EGZ71087.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 684
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 227/481 (47%), Gaps = 87/481 (18%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
G F VQ A + + D+ + +PTGSGKTL+Y LP+VQ ++ LR ++
Sbjct: 236 GFKDAFAVQTAALPLLLPNPDLQGDVVVAAPTGSGKTLAYVLPMVQDIALSQTTKLRGVI 295
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
VLPTRDL QV A
Sbjct: 296 VLPTRDLVQQVQQACEACAAAFAGSSGGKR------------------------------ 325
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
+ VG A+G +E + P V+Q + VDIL+ TPGRL++HI
Sbjct: 326 --VKVGTAMGNRPFKEEQGRPL------------PYHVIQHV-PKVDILICTPGRLVEHI 370
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
T+GFTL+++ +LVVDE D+LL + +Q WL V NE L
Sbjct: 371 TKTKGFTLDYVRWLVVDEADKLLAQDFQQWLDVV-------NEK---------------L 408
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKL--P 298
+ + +K PR K++LSAT+T+D L L L P L + G L P
Sbjct: 409 AVSKPGARDFAANNKTGPR--KVILSATMTRDITLLNGLKLSRPKLVVLEGAKAGDLAIP 466
Query: 299 ERLESYKL-ICESKLKPLYLVALLQS-----LGEEKCIVFTSSVESTHRLCTLLNH---- 348
L+ Y + I E LKPLYLV LLQS ++FT+S +S RL LL+
Sbjct: 467 ATLKEYAIKITEPSLKPLYLVDLLQSKYMAAAFPTTALIFTASNQSALRLSRLLSLLLPP 526
Query: 349 -FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 407
F L I + + SVR +TL+AF GK+++LV+SD ++RG+D+ +++V+NYD P
Sbjct: 527 SFAPL---IGTLTSSTKTSVRLRTLRAFTSGKLRILVASDLVSRGIDLSNLDHVINYDLP 583
Query: 408 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF-KKLLQKADNDSCPIHSIPSSLIESL 466
+Y+HR GRTARAG+ G+ +TL+ E +RF ++ + + C + +E +
Sbjct: 584 LSETSYVHRVGRTARAGREGKAWTLVEFAEARRFWREFVGEGSGAVCNVKRAEGRTVERV 643
Query: 467 R 467
R
Sbjct: 644 R 644
>gi|149235381|ref|XP_001523569.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013489|sp|A5E726.1|DBP6_LODEL RecName: Full=ATP-dependent RNA helicase DBP6
gi|146452978|gb|EDK47234.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 663
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 224/471 (47%), Gaps = 116/471 (24%)
Query: 1 MGISSLFPVQVAVWQE--------TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+G + F VQV V + + P F D+ +N+ TGSGKTL+Y++PI+++L +R
Sbjct: 240 LGFENAFAVQVGVLSKLLPEIQANKLRPDAFG-DVLVNASTGSGKTLAYSIPIIESLKDR 298
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RA+V++PT+ L +N R
Sbjct: 299 VVPRVRAIVLVPTKPL---INQVR------------------------------------ 319
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
A + L++G + S+ ++IS R + E I P D++++
Sbjct: 320 ------ATMLQLALGTNLNIVSLKNDIS---IREESERLIELVP-----------DVVIS 359
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL++H+ A +L L YLVVDE DRLL +++Q W ++ ++
Sbjct: 360 TPGRLVEHL-AMDSISLSSLRYLVVDEADRLLNQSFQNWSQILI--------SKIHLQQV 410
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
+ + SLK + K + SATLT D KLA LD H+P L +
Sbjct: 411 YDVANVWSLK------------------VQKFIFSATLTTDAGKLASLDFHNPRLLIVND 452
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEK---CIVFTSSVESTH 340
++ + +P L YKL + +S LKPL L L + +EK +VFT S ES+
Sbjct: 453 SQRLVNELFSVPAMLSEYKLNFGVAKSSLKPLILAKFL--IAQEKLSDVLVFTKSNESSI 510
Query: 341 RLCTLLNH-FGELRIKIKEYSGL-----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
RLCTLL F + ++ K G R S+RSK LK F KI +LV++D + RG+D
Sbjct: 511 RLCTLLQAIFDRICLQEKVKVGFMNLTNNRTSLRSKILKDFTSQKINILVATDLIARGLD 570
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH-KDEVKRFKKL 444
V + +VVNYD + Y+HR GRTARA Q G + L+ K E K FK +
Sbjct: 571 VTSIKDVVNYDLLNSSREYVHRVGRTARANQAGNAYNLVFGKGEEKWFKTI 621
>gi|396489645|ref|XP_003843156.1| hypothetical protein LEMA_P089160.1 [Leptosphaeria maculans JN3]
gi|312219734|emb|CBX99677.1| hypothetical protein LEMA_P089160.1 [Leptosphaeria maculans JN3]
Length = 705
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 234/515 (45%), Gaps = 97/515 (18%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 58
G + VQ A+ + PG FE+ D+C+++ TGSGKTL+Y LPI++ L +R V L
Sbjct: 178 GFNDALAVQTALL-PMLHPG-FEQHLGDICVSAKTGSGKTLAYLLPIIEALKDRVVPVLS 235
Query: 59 ALVVLPTRDL---ALQVNSARC---KYCCKNIFGLIA----DHSIAEMCVQFDSLLFISL 108
A++V+P+R L ALQV C K G +A + ++ Q+D L
Sbjct: 236 AVIVVPSRQLVNQALQVAEELCAGTKIKVGTALGNVAFPTEQKQLVKLRAQYDPHRTREL 295
Query: 109 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 168
+ + +G A + I D++ + P D + + S VD
Sbjct: 296 HE--------RASRQFQIGFA-EKGGIFDDLKSM-------------PLDHVPQYDSGVD 333
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
IL+ TPGRL++HI T GF L + +LV+DE D+LL + +Q W +++ + F
Sbjct: 334 ILICTPGRLVEHIENTTGFLLNAVQWLVIDEADQLLNQNFQGWAGVLMEALHGETPPDFM 393
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHPLF 287
+A ++ R + P R L K+VLSAT+ +D KL L L P
Sbjct: 394 NAQE-------RIRMRERDANSKWSVALPARRQLTKVVLSATMEKDLTKLGTLKLKRPKL 446
Query: 288 ------------LTTGETRYKLPERLESYKL-ICESKLKPLYLVALLQ------------ 322
L + ++LP L+ + + + KPL+L+ +L
Sbjct: 447 VVVQDEATEIQPLDHEDNVFELPSTLDEVAVHVGDGSNKPLHLLYILLNAVFPGAESGMK 506
Query: 323 --------------------------SLGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIK 355
S + + +VFT S ES RL LL+ R
Sbjct: 507 QESSDSSSDSSSAEDSEHDEEKEGSLSKQQSRVLVFTKSTESASRLSHLLSVLAPNFRKY 566
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
+K + K L++F G I++L++SDA +RG+D+ + +V+NYD P I +Y+H
Sbjct: 567 LKTMTRALTAEASRKLLRSFGTGAIKILIASDAASRGLDIPSITHVINYDLPTSITSYVH 626
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
R GRTARAG++G +TL K E F K + K D+
Sbjct: 627 RVGRTARAGKVGEAWTLFTKTEAAWFLKQVAKGDS 661
>gi|406601292|emb|CCH47065.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 642
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 228/469 (48%), Gaps = 111/469 (23%)
Query: 1 MGISSLFPVQVAVW-------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 53
+G + F Q+ + P + DL +N+ TGSGKTL+Y +PI+Q+L NR
Sbjct: 221 LGFDNAFATQIKTLGLLLPEINNKLNPNSIKGDLLVNASTGSGKTLAYTIPIIQSLQNRI 280
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V LR ++++PT+ L + QV
Sbjct: 281 VPRLRCIILVPTKPL---------------------------------------INQVYK 301
Query: 114 VFAAIAPAVGLSVGLAVGQS--SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
+I+ + L++ + +G+S ++ DE +LIK + DI++
Sbjct: 302 TMDSISKGIDLNI-VTLGKSDLNLQDEHLKLIK--------------------NVPDIII 340
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
+TPGRL+DH+N + L++L + V+DE DRLL +++Q W + + +T+ ++ N+ ++ S
Sbjct: 341 STPGRLVDHLNL-KSIDLKNLQWCVIDEADRLLNQSFQDW--SNVLITKLNDVNKGNNIS 397
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 290
FK P L+KM+ SATLT D KL+ L+ H+P L +
Sbjct: 398 KI-------------------FK----PNLIKMIFSATLTTDSGKLSNLNFHNPRLIIVN 434
Query: 291 GETR-------YKLPERLESYKLICESKL---KPLYLVALLQSLG-EEKCIVFTSSVEST 339
E + LP +L + + S KPLYL+ L + L ++FT S EST
Sbjct: 435 NEESILQNDKIFTLPTQLSEHTIKLSSNSSSHKPLYLLKLFEWLKYPHNVLIFTKSNEST 494
Query: 340 HRLCTLLNH-FGELRIK--IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
RL LL+ +L I I + Q +S +SK LK F EG I +L+S+D ++RG+D+
Sbjct: 495 LRLSRLLSILVSKLSIPLIISNINSSQSRSEKSKLLKQFSEGSIHILISTDLISRGIDIL 554
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT-LLHKDEVKRFKKL 444
+ +V+NYD P + Y+HR GRTARA G + L+ K EVK + K+
Sbjct: 555 TIQHVINYDLPNSSREYVHRVGRTARANNKGDAYNFLIGKGEVKFWNKI 603
>gi|150864672|ref|XP_001383606.2| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6)
[Scheffersomyces stipitis CBS 6054]
gi|158514827|sp|A3LSJ2.2|DBP6_PICST RecName: Full=ATP-dependent RNA helicase DBP6
gi|149385928|gb|ABN65577.2| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6)
[Scheffersomyces stipitis CBS 6054]
Length = 591
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 202/435 (46%), Gaps = 103/435 (23%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PI++ L NR V +RA+V++PT+ L
Sbjct: 203 DILVNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPL----------------- 245
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
+ QVK F ++ LSV SI +E +++
Sbjct: 246 ----------------------INQVKATFVQLSRGTNLSVVSLRNDVSIKEEGIKIVNS 283
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
P DI+V+TPGRL++HI + + L L +LV+DE DRLL
Sbjct: 284 PP--------------------DIIVSTPGRLVEHI-SNKSINLNSLQFLVIDEADRLLN 322
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W ++ D + +K P K++
Sbjct: 323 QSFQNWCQVLISSLEGD------------------------VNIAEEWKITPQ----KLI 354
Query: 266 LSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESKLKPLY 316
SATLT D KL+ L P + + + + +P L Y + ++ +KPL
Sbjct: 355 FSATLTTDSGKLSALKFQKPRLVIVNDRKQLVNEIFNVPSSLSEYTIQFGTAKASIKPLI 414
Query: 317 LVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIK-EY--SGLQRQSVRSKT 371
L LL++ ++FT S E++ RLC LL FG+L + Y S + ++R+K
Sbjct: 415 LAKYLLENNKLSNVLIFTKSNEASIRLCKLLELMFGKLHPSMNIAYINSTNNKSAIRTKI 474
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
LK F KI +LV++D + RG+D+ + +V+NYD P + Y+HR GRTARA Q G +T
Sbjct: 475 LKDFSTQKINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARANQTGHAYT 534
Query: 432 L-LHKDEVKRFKKLL 445
L K E K FKK++
Sbjct: 535 LCFGKGEAKWFKKII 549
>gi|255726860|ref|XP_002548356.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134280|gb|EER33835.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 608
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 216/469 (46%), Gaps = 112/469 (23%)
Query: 1 MGISSLFPVQVAVWQETIG--------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
MG SS F VQV+V I P F D+ +N+ TGSGKTL+Y++PI+++L R
Sbjct: 189 MGFSSAFAVQVSVLDMMIPEIKAHKLMPDPFG-DILVNASTGSGKTLAYSIPIIESLHKR 247
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RA++++PT+ L + QVK
Sbjct: 248 VVPRVRAIILVPTKPL---------------------------------------INQVK 268
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
F ++ L V SI DE +L+K S DI+V+
Sbjct: 269 ATFLQLSSGTNLQVMALKNDISINDE-KQLLK-------------------NSIPDIIVS 308
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL++H+ +L L YLV+DE DRLL +++Q W +L +R + A
Sbjct: 309 TPGRLVEHL-IGDSISLSSLQYLVIDEADRLLNQSFQNWSQILL--------DRMNSAI- 358
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
++ R V+ KMV SATLT D KL+ L P + +
Sbjct: 359 -------NISEEWRLPVQ------------KMVFSATLTTDAGKLSSLKFFKPRLIIVND 399
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRL 342
++ + +P L YK+ + ++ LKPL L L S G+ ++FT S ES+ RL
Sbjct: 400 SKQLVNEIFTVPNTLSEYKIHLGVAKNSLKPLILARFLISKGKLSNVLIFTKSNESSIRL 459
Query: 343 CTLLN-HFGELRIKIKE---YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
LL F +L I I S R +VR+K LK F I +L+++D + RG+D+ +
Sbjct: 460 AELLTILFKKLSIDINVSFINSTNNRTAVRTKILKQFSSQGINILIATDLIARGIDLTSI 519
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKLLQ 446
+V+NYD P + Y+HR GRTARA Q+G ++ K E F L++
Sbjct: 520 TDVINYDLPNSSREYVHRVGRTARANQVGYAYSFCFGKGENSWFTTLIK 568
>gi|367009624|ref|XP_003679313.1| hypothetical protein TDEL_0A07700 [Torulaspora delbrueckii]
gi|359746970|emb|CCE90102.1| hypothetical protein TDEL_0A07700 [Torulaspora delbrueckii]
Length = 627
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 212/453 (46%), Gaps = 118/453 (26%)
Query: 7 FPVQVAVWQE----------TIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
FP+Q A+ + T L R D+ +N+ TGSGKTL+Y++PIVQ LS R V
Sbjct: 194 FPIQTALLENLLPILNFSLSTTKKHLTRRVGDVLVNASTGSGKTLAYSIPIVQLLSKRTV 253
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL+++PT+ L I+ QV D
Sbjct: 254 NRLRALIIVPTK-------------------------------------LLIN--QVYDT 274
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
+A GL + ++ ++S+ +E + +QS D+L+ TP
Sbjct: 275 INKLAQGTGLIISISKLENSLKEEHKKF--------------------MQSEPDVLIITP 314
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH+ + ++++L L++DE D LL +++Q W P +L
Sbjct: 315 GRLVDHL-QMKSISMKNLQMLILDEADHLLNQSFQNWCPRLL------------------ 355
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET 293
S + K +R G ++KMV SATLT + KL L+L++P LF+
Sbjct: 356 -SQITAEKHDQRPG-----------NVIKMVFSATLTTNTEKLHGLNLNNPRLFIMDSVK 403
Query: 294 RYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--- 347
Y LPE+L+ Y + +S KPL L+ LL + K +VF S E++ RL LLN
Sbjct: 404 LYSLPEKLQEYIVNIPTSKSLYKPLILLHLLDHMKSAKVLVFVKSNEASLRLACLLNILI 463
Query: 348 -------HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
H E I G ++ V +K A E K ++L+++D M+RG+D+ +++
Sbjct: 464 DQNLAQRHIVET-INSNNSKGENKRLV-NKFASAECESKNRILITTDLMSRGIDINDISD 521
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
V+NYD P + Y+HR GRTARA G + LL
Sbjct: 522 VINYDLPISSQQYVHRCGRTARAQSKGNAYNLL 554
>gi|238880181|gb|EEQ43819.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 606
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 211/466 (45%), Gaps = 110/466 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER-------DLCINSPTGSGKTLSYALPIVQTLSNRA 53
MG + F VQ++V + ++ D+ +N+ TGSGKTL+Y++PI+++L R
Sbjct: 187 MGFTEAFSVQISVLNMMLPEIEAQKLKPDRVGDILVNASTGSGKTLAYSIPIIESLYRRV 246
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RA++++PT+ L + QVK
Sbjct: 247 VPRVRAIILVPTKPL---------------------------------------INQVKS 267
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
++ L + SI DE L K S DI+V+T
Sbjct: 268 TLLQLSSGTNLQIAALKNDVSINDEKDSLTK--------------------SVPDIIVST 307
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL++H+ L L YL++DE DRLL +++Q W +L S
Sbjct: 308 PGRLVEHL-LNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKIDSQ----------- 355
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
++ + + V+ K+V SATLT D KL+ L ++P + ++
Sbjct: 356 -----INIAEVWKLSVQ------------KLVFSATLTTDAGKLSSLKFYNPRLIIVNDS 398
Query: 294 R------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLC 343
+ + +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL
Sbjct: 399 KQLVNEIFTVPVTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLT 458
Query: 344 TLLNH-FGELRIKIKE---YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
LL F +L I +K S R S+RSK LK F ++ +L+++D + RG+DV +
Sbjct: 459 ELLTSLFQKLSINLKIAFINSTNNRTSIRSKILKQFSNQEVNILITTDLIARGIDVASIT 518
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKL 444
+V+NYD P + Y+HR GRTARA Q+G ++ K E F KL
Sbjct: 519 DVINYDLPNSSREYVHRVGRTARANQVGYAYSFCFGKGENSWFNKL 564
>gi|159485610|ref|XP_001700837.1| hypothetical protein CHLREDRAFT_167836 [Chlamydomonas reinhardtii]
gi|158281336|gb|EDP07091.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 321
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 144/277 (51%), Gaps = 56/277 (20%)
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
LC VVDETDRLLR++YQ WLP VL + S L
Sbjct: 98 LCEAVVDETDRLLRQSYQEWLPRVLA--------QLSPQHAVLQQHL------------- 136
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
+V+SATLT+DP KL +L LHHP RY L
Sbjct: 137 -----------HIVVSATLTRDPAKLQRLALHHP--------RYPLALLALLADASAAG- 176
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
E IVFTSS+E TH+L +L+ G+L K+ EYS R+
Sbjct: 177 ---------------ESVIVFTSSLEMTHKLYLMLSAVGDLAGKVVEYSSHVPAKERASG 221
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L+ FR+G +VLV+SDAMTRGMDV+ V V+NYD P Y KTY+HRAGRTARAG+ GR T
Sbjct: 222 LERFRKGDAKVLVASDAMTRGMDVDCVQAVINYDAPVYAKTYVHRAGRTARAGKSGRVVT 281
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRP 468
LL ++++ FK +++KADN+ +P+ +ES RP
Sbjct: 282 LLRDEDMRHFKAMIRKADNNFVRELKLPAERVESFRP 318
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN-------RA 53
+ LFPVQ AVWQ + G DLC+ +PTGSGKTL+YALP+V L++ R+
Sbjct: 13 FSFTELFPVQAAVWQHSAGGRSTAHDLCVAAPTGSGKTLAYALPVVNALADTTSHKHSRS 72
Query: 54 VRCLRALVVLPTRDLALQV 72
+ L+ALVVLPTRDLA QV
Sbjct: 73 LGRLQALVVLPTRDLAAQV 91
>gi|401840382|gb|EJT43223.1| DBP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 629
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D +N+ TGSGKTL+Y++P+VQTLS
Sbjct: 195 TNAFPIQ-SIILDSILPILNFTLNVSKRYFTRRIGDTLVNAATGSGKTLAYSIPVVQTLS 253
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR L+V+PT+ L QV++ K
Sbjct: 254 RRKINRLRCLIVVPTKLLINQVHTTLTK-------------------------------- 281
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ + L V +A ++S+ DE + + LE DIL
Sbjct: 282 -------LTQGMSLIVSIAKLENSLKDEHKKFLN---LEP-----------------DIL 314
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D + F
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLVFHLKTDKLDTFPG- 372
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
++KM+ SATLT + KL L+L+ P LFL
Sbjct: 373 -----------------------------NVIKMIFSATLTTNTEKLNDLNLYKPKLFLK 403
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLVALLQSL-----GEEKCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPSKLREFNINVPTAKSIYKPLILLYSIDQFIAHLSDASKILIFVKSNESSIR 463
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 384
L LL E R + + LQ QS K + F + I +L+
Sbjct: 464 LTKLLQLISESRSQSNIFRNLQNLEMVINSVNSNHPQSENKKIVANFSNRSKSASINILI 523
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA + G + LL + E F
Sbjct: 524 TTDVMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANETGSAYNLLVGRGERTFFDD 583
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVAPLELDFTLLESDSELYHSS 615
>gi|391327051|ref|XP_003738021.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Metaseiulus
occidentalis]
Length = 429
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 209/469 (44%), Gaps = 77/469 (16%)
Query: 9 VQVAVWQETIGP-----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 63
+Q V +E + P GL RD+C+ +PTGSGKTL+Y LP+++ L + +RA+++L
Sbjct: 1 MQKQVIRELLDPRYDIMGLPPRDICVAAPTGSGKTLAYVLPLIKLLKGLFEKAIRAVILL 60
Query: 64 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 123
PT +LA QV DVF A
Sbjct: 61 PTSELA---------------------------------------KQVYDVFTRYAAPFQ 81
Query: 124 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 183
LS L G S ++E+ L++R VD+++ATP ++H+
Sbjct: 82 LSAALLTGLKSHSEEVKTLLERG-----------------HPIVDVVIATPKTFLNHLRL 124
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
T GF L + +LV+DE DR++ + V +N D++ S G+ +
Sbjct: 125 TPGFNLRLVSHLVLDEADRMVDMVIHGLIREV------ENAIYVDDSARCRCSEIGNFER 178
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE------TRYK 296
R + D L K++ SATL DP KL ++L +P +F E +
Sbjct: 179 SRPTAISCCTMDAHSLPLRKLLYSATLMSDPEKLRHVNLFYPRVFHAKAEHANRSDKAFA 238
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
LP+ LE K+ C+ ++PL + L + IVF S E HRL ++ G K+
Sbjct: 239 LPDSLEERKIFCDIDVRPLLVWWLFVHQKMGRMIVFARSREECHRLRIVIEFMGS--CKV 296
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
+ S ++ R K L F EG +++++ ++RGMD++ V +VV Y P + Y+H
Sbjct: 297 VDLSADMKKRQRQKALADFDEGLCDMIIATQVLSRGMDLKSVEHVVLYHAPTSAEDYVHM 356
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP-IHSIPSSLIE 464
GRTARA + G+ LL E + K L+ N PSSL E
Sbjct: 357 VGRTARANKQGKSLVLLSPAENAKLSKTLKAISNSKVKEFQWDPSSLRE 405
>gi|146416595|ref|XP_001484267.1| hypothetical protein PGUG_03648 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 218/473 (46%), Gaps = 119/473 (25%)
Query: 2 GISSLFPVQVAVWQ--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 53
G SS F VQV+V + + I P + DL +N+ TGSGKTL YA+PI+++L NR
Sbjct: 210 GFSSAFSVQVSVLKLLLPDMESQAIRPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRI 268
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RA+V++PT+ L + QVK
Sbjct: 269 VPRVRAIVLVPTKPL---------------------------------------ISQVKA 289
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
FA ++ LSV SI DE Q LQ DI+V+T
Sbjct: 290 TFAMLSKNTNLSVVSLRSDISINDEA---------------------QRLQVVPDIIVST 328
Query: 174 PGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
PGRL++H+ T G L+ L YLV+DE DRLL +++Q W T+ ++R D+ T
Sbjct: 329 PGRLVEHL--TNGHINLKSLRYLVIDEADRLLNQSFQNWCETL--MSRIDSNPILELDQT 384
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
+ PS + K+V SATLT D +L+ L L P + +
Sbjct: 385 WRPS------------------------VQKLVFSATLTTDAGRLSMLKLQRPRLIIVND 420
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCI---VFTSSVESTH 340
+ +P L+ YKL S KPL L L S E+K + VF S E++
Sbjct: 421 RHELVNELFTVPATLQEYKLSLGSARSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEASL 478
Query: 341 RLCTLLNH----FGELRIKIKEYSGLQR-QSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
RLC LL FG L + + + S R+K LK F + +LV +D + RG+D+
Sbjct: 479 RLCRLLQLLFRVFG-LDVTVSYLNSTNNAASTRAKILKDFANQTVHILVVTDLIARGIDI 537
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKLLQK 447
+ NV+NYD P + Y+HR GRTARA Q G +T+ K E K F +L+++
Sbjct: 538 ATITNVINYDLPNSSRDYVHRVGRTARANQDGEAYTMCFGKGETKWFTQLVRE 590
>gi|255710965|ref|XP_002551766.1| KLTH0A07084p [Lachancea thermotolerans]
gi|238933143|emb|CAR21324.1| KLTH0A07084p [Lachancea thermotolerans CBS 6340]
Length = 628
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 219/457 (47%), Gaps = 121/457 (26%)
Query: 7 FPVQVAV---------WQETIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
FPVQ + + +++ F R D+ +N+ TGSGKTL+Y++P+VQ LS R V
Sbjct: 200 FPVQTVILDTVVPKMNFAQSVNKKSFPRRVGDILVNASTGSGKTLAYSIPVVQCLSKRTV 259
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LR L+V+PT+ L QV F++L+ +S
Sbjct: 260 NRLRCLIVVPTKILIHQV---------------------------FETLVKLS------- 285
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
L G++ ++S+ +E K +A +P DILV TP
Sbjct: 286 -----QGTSLITGISKLENSLREE------HRKFQAQ---EP-----------DILVITP 320
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH+ F+L++L +L++DE DRLL +++Q W +++ ++D
Sbjct: 321 GRLVDHLQLN-TFSLKNLKFLILDEADRLLNQSFQNWCSVIMERLKTD------------ 367
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYP-RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 292
K++ +P ++KMV SATLT + KL L L+ P LF+
Sbjct: 368 -------------------KEEMHPVSVIKMVFSATLTTNTEKLHGLQLNRPSLFMMDSV 408
Query: 293 TRYKLPERLESYKL---ICESKLKPLYLVALLQSLG--EEKCIVFTSSVESTHRLCTLLN 347
Y LP++L+ + + +S KPL+ + L+ +L + + +VF S E++ RL TLL
Sbjct: 409 KLYHLPKQLQEFNIKIPTAKSFAKPLFALQLIAALSPTDPRILVFVRSNEASIRLATLLE 468
Query: 348 HFG-------ELRIKIKEYSGLQRQSVRSKTLKAFR----EGKIQVLVSSDAMTRGMDVE 396
E R +I + + + SK +K F E ++LV++D M+RG+D+
Sbjct: 469 ILVNNKVLPIEFRTQIASINSNNTKGLNSKLIKQFASSSPEKVTKILVATDLMSRGIDIN 528
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
V++V+NYD P + Y+HR GRTARA G F LL
Sbjct: 529 NVSHVINYDLPISSQQYVHRCGRTARAQASGEAFNLL 565
>gi|223590192|sp|A5DK47.2|DBP6_PICGU RecName: Full=ATP-dependent RNA helicase DBP6
gi|190347303|gb|EDK39550.2| hypothetical protein PGUG_03648 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 221/473 (46%), Gaps = 119/473 (25%)
Query: 2 GISSLFPVQVAVWQ--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 53
G SS F VQV+V + + I P + DL +N+ TGSGKTL YA+PI+++L NR
Sbjct: 210 GFSSAFSVQVSVLKLLLPDMESQAIRPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRI 268
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RA+V++PT+ L + QVK
Sbjct: 269 VPRVRAIVLVPTKPL---------------------------------------ISQVKA 289
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
FA ++ LSV SI DE Q LQ DI+V+T
Sbjct: 290 TFAMLSKNTNLSVVSLRSDISINDEA---------------------QRLQVVPDIIVST 328
Query: 174 PGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
PGRL++H+ T G L+ L YLV+DE DRLL +++Q W T+ ++R D+ N S+
Sbjct: 329 PGRLVEHL--TNGHINLKSLRYLVIDEADRLLNQSFQNWCETL--MSRIDS-NPISELD- 382
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
+T R P + K+V SATLT D +L+ L L P + +
Sbjct: 383 ---------QTWR-------------PSVQKLVFSATLTTDAGRLSMLKLQRPRLIIVND 420
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCI---VFTSSVESTH 340
+ +P L+ YKL S KPL L L S E+K + VF S E++
Sbjct: 421 RHELVNELFTVPATLQEYKLSLGSARSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEASL 478
Query: 341 RLCTLLNH----FGELRIKIKEYSGLQR-QSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
RLC LL FG L + + + S R+K LK F + +LV +D + RG+D+
Sbjct: 479 RLCRLLQLLFRVFG-LDVTVSYLNSTNNAASTRAKILKDFANQTVHILVVTDLIARGIDI 537
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKLLQK 447
+ NV+NYD P + Y+HR GRTARA Q G +T+ K E K F +L+++
Sbjct: 538 ATITNVINYDLPNSSRDYVHRVGRTARANQDGEAYTMCFGKGETKWFTQLVRE 590
>gi|378754810|gb|EHY64839.1| hypothetical protein NERG_02242 [Nematocida sp. 1 ERTm2]
Length = 421
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 195/436 (44%), Gaps = 105/436 (24%)
Query: 31 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 90
S TG+GKTL+Y LPI+ TL + A+V+LPTR+L+ QV++
Sbjct: 50 SNTGTGKTLAYLLPIMHTLLQDD-KYFYAMVILPTRELSQQVHA---------------- 92
Query: 91 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 150
V A I +GL L +G + + + L RP
Sbjct: 93 -----------------------VLADIGAEIGLRTSLLIGATDLLSQGKSLAARPH--- 126
Query: 151 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 210
I++ TPGR+ H+ T+G ++ YLV+DE DRLL +
Sbjct: 127 ------------------IVIGTPGRINHHLRNTKGISVSSFKYLVLDECDRLLDNDFDG 168
Query: 211 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 270
+ +L++ S TFL SATL
Sbjct: 169 DINNILEM--------ISPKYTFL-------------------------------FSATL 189
Query: 271 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
T+ N + +++PL + +PE + + K K +YL +++ +LG KCI
Sbjct: 190 TKRVNAFKEKRMNNPLLYNVQKDE-GIPENILQQYIYLPQKYKEMYLYSIVHNLGSRKCI 248
Query: 331 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
VF + + R+ +L GE I G + Q +R++T++ FR GK +L+S+D +
Sbjct: 249 VFVKTCITAERIERILRFLGESVCSIH---GNKTQDIRTETIEMFRRGKHSILISTDVVA 305
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
RGMD++G+ ++NYD P K YIHR GRT RAG++G TL+ + +V F+KL K N
Sbjct: 306 RGMDMDGIKVIINYDMPDGHKEYIHRIGRTGRAGEVGSSITLVTQYDVDDFRKLEVKL-N 364
Query: 451 DSCPIHSIPSSLIESL 466
+S+ S LI SL
Sbjct: 365 KKMDEYSVSSELIYSL 380
>gi|294657476|ref|XP_459782.2| DEHA2E10912p [Debaryomyces hansenii CBS767]
gi|218512021|sp|Q6BPT8.2|DBP6_DEBHA RecName: Full=ATP-dependent RNA helicase DBP6
gi|199432720|emb|CAG88021.2| DEHA2E10912p [Debaryomyces hansenii CBS767]
Length = 576
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 218/471 (46%), Gaps = 112/471 (23%)
Query: 1 MGISSLFPVQVAVW--------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
MG S F VQ++V + + P + DL +N+ TGSGKTL+Y++PI+++L
Sbjct: 148 MGFESAFSVQISVLNLMLKDIERNRLQPDM-RGDLLVNASTGSGKTLAYSIPIIESLQTV 206
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RA++++PT+ L + QVK
Sbjct: 207 KVPRVRAIILVPTKPL---------------------------------------INQVK 227
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV-DILV 171
++ LS+ S+ +++S IK E GI +LQ+ DI+V
Sbjct: 228 TTLNQLSKGTNLSI------VSLKNDLS--IK----EEGI---------KLQTNEPDIIV 266
Query: 172 ATPGRLMDHINATRGF-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+TPGRL+DH+ T G+ +L++L YLV+DE DRLL +++Q W
Sbjct: 267 STPGRLVDHL--TNGYISLKNLQYLVIDEADRLLNQSFQNW------------------- 305
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
L S I+ + +K + KM+ SATLT D KL+ L H P +
Sbjct: 306 CQILISKIDEFTNIKERNISNSWK----LNVQKMIFSATLTTDAGKLSLLKFHKPRLIIV 361
Query: 291 GETR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTH 340
+ LP L +KL +S LKPL L L S + ++FT S +++
Sbjct: 362 NNKEQLVNEMFSLPATLNEFKLQFGSAKSSLKPLILSKFLLSKNKLANVLIFTKSNDASL 421
Query: 341 RLCT----LLNHFGELRIKIKEYSGLQRQ-SVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
RL ++N G I I + SVRSK LK F + I +LV++D + RG+D+
Sbjct: 422 RLSRLLSLIMNKLGSETINIAYINSTNNTTSVRSKILKDFSKQTINILVATDLIARGIDI 481
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKLL 445
+ +V+NYD P + Y+HR GRTARA Q G + K E K FKKL+
Sbjct: 482 LSITDVINYDLPNSSREYVHRVGRTARANQEGFAYNFCFGKGEAKWFKKLM 532
>gi|307104244|gb|EFN52499.1| hypothetical protein CHLNCDRAFT_138879 [Chlorella variabilis]
Length = 576
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 279 QLDLHHPLFLTTG--ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
+L LH P ++ + RY+LP L+ KL+ ++ KP L ALLQ L E+ IVFTSSV
Sbjct: 295 RLGLHCPRYIAMSAVDHRYQLPRSLQELKLVVPAERKPAALAALLQELRGEQTIVFTSSV 354
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
E+THRL LL L + E+S L + R+ L+AFR GK +VLV SDAMTRGMDV
Sbjct: 355 EATHRLHLLLAALPCLPDRAVEFSSLVAPAERAARLEAFRSGKAKVLVCSDAMTRGMDVA 414
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
GV NVVNYD P Y+KTY+HRAGRTARAG+ GR FTLL ++V+ FK +L+KADN H
Sbjct: 415 GVANVVNYDAPVYVKTYVHRAGRTARAGRAGRVFTLLRHEDVRHFKGMLRKADNTFVRAH 474
Query: 457 SIPSSLIESLR 467
+ +E++R
Sbjct: 475 RLAKGALEAVR 485
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 101/197 (51%), Gaps = 59/197 (29%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI LFPVQ W+ET G D+CI +PTGSGKTLSYALP++Q LS RAV LRALV
Sbjct: 157 GIEVLFPVQTVAWRETAGGASPAHDICICAPTGSGKTLSYALPVLQALSGRAVPRLRALV 216
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
VLPTRDLA+QV FG V A + PA
Sbjct: 217 VLPTRDLAVQV------------FG---------------------------VLAGLCPA 237
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
+GL+ LA G++S+A E L VDILVATPGRL+ H+
Sbjct: 238 LGLAACLAAGKASLAAEAQLLAS--------------------GGVDILVATPGRLIAHL 277
Query: 182 NATRGFTLEHLCYLVVD 198
T GFTL HL +LV+D
Sbjct: 278 EGTPGFTLRHLRFLVID 294
>gi|358255930|dbj|GAA57535.1| ATP-dependent RNA helicase DDX51/DBP6, partial [Clonorchis sinensis]
Length = 1092
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 234/532 (43%), Gaps = 139/532 (26%)
Query: 1 MGISSLFPVQVAVWQETIG--------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+G S LFPVQ V + P D+CI +PTGSGKTL+Y++P++Q L R
Sbjct: 543 IGCSELFPVQACVIPSILRSYRLNKRRPLCRPSDICIAAPTGSGKTLAYSIPLIQLLHGR 602
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
LRALV+LP RDLA QV F ++ D +AE S L I
Sbjct: 603 VQVFLRALVILPVRDLAAQV------------FQVLLD--LAEGTDLRVSCLLIC----- 643
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+I P L + L G S E +L+ A + DI+VA
Sbjct: 644 -TNCSITP---LQIVLINGSKSFMKEQLDLVDTTSSVA-------------HTKADIVVA 686
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DHI T GF+LE L LV+DE DR++ E Q W R + +
Sbjct: 687 TPGRLVDHIYNTVGFSLERLRILVIDEADRVISEEKQDWY-------------RILEDAL 733
Query: 233 FLPSAF-----GSLKTIRRCGVERG---------FKDKPYPRLVKMVLSATLTQDPNKLA 278
+ P+AF G + R G++R + L K++ SATLT DP L
Sbjct: 734 YHPNAFAFDIDGEIGYRRPTGLQRTRPVMTIMHQYDTSHDITLQKILASATLTHDPEPLK 793
Query: 279 QLDLHHP-LFLTTGETRYKLPERLESYKLIC------ESKLKP--------LYLVALLQS 323
+ +L+ P LF ++ + R + ++C E L+P +AL +
Sbjct: 794 RFNLYFPHLFASSTSAQ----PRNSNGPIVCDIGHAVEPDLEPPMKKKKKQKKKIALSEG 849
Query: 324 LGEEKCI--------------VFTS---------SVESTHR---LCTLLNH--------- 348
+ VF++ +V+ HR L L+ H
Sbjct: 850 MAHNASHTDCSETVQDAGGVGVFSTPPGLKEYVVAVQPEHRALFLIHLIRHENVKRVLCF 909
Query: 349 ------FGELRIKIKEYSGLQRQSV--------RSKTLKAFREGKIQVLVSSDAMTRGMD 394
L + + + G++ + R + L AF ++ VLV +D+M RGMD
Sbjct: 910 TNSRTTAARLHMLLSNFKGIRSYRISGHMPPDKRQRVLSAFTRNELDVLVCTDSMARGMD 969
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
V+ VN VV+Y+ P +K Y+HR GRTARAGQ G +TLL+K++ FKK L+
Sbjct: 970 VKEVNCVVSYEMPPNVKIYVHRVGRTARAGQPGLAYTLLNKNQFFHFKKDLR 1021
>gi|156847460|ref|XP_001646614.1| hypothetical protein Kpol_1028p29 [Vanderwaltozyma polyspora DSM
70294]
gi|160380624|sp|A7TFZ9.1|DBP6_VANPO RecName: Full=ATP-dependent RNA helicase DBP6
gi|156117293|gb|EDO18756.1| hypothetical protein Kpol_1028p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 637
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 210/456 (46%), Gaps = 124/456 (27%)
Query: 7 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 53
FP+Q ++ ET+ P L F R D+ +N+ TGSGKTL+Y++PI+Q LS R
Sbjct: 199 FPIQ-SILLETLLPTLNFSYNITKKNFTRRVGDVLVNASTGSGKTLAYSIPILQILSKRT 257
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V LRALV++PT+ L + QV +
Sbjct: 258 VNKLRALVIVPTKLL---------------------------------------INQVYE 278
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
F +A L V ++ ++S+ +E +L LQ+ DIL+ T
Sbjct: 279 TFNNLAQGTSLIVSISKLENSLKEENKKL--------------------LQNEPDILITT 318
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + L +L +LV+DE DRLL +++Q W +L ++D ++
Sbjct: 319 PGRLVDHLQSG-AVNLRNLKFLVLDEADRLLNQSFQNWCNELLNKLKTDKQDH------- 370
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 292
+P +VKMV SATLT + KL L ++P LF+
Sbjct: 371 MPG-----------------------NIVKMVFSATLTTNTEKLHGLQFYNPKLFVMDSV 407
Query: 293 TRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
Y LP L+ Y L ++ KPL+L+ LL + K +VF S ES+ RL +L
Sbjct: 408 KLYHLPRMLQEYNLHIPTAKTSYKPLFLLRLLSEINGSKMLVFVKSNESSLRLASL---- 463
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKA------------FREGKIQVLVSSDAMTRGMDVEG 397
+ I+ K S SV S KA K+QVL+++D M+RG+D+
Sbjct: 464 LSIMIEHKLGSQFDINSVNSNNTKAENRRIVNEFASNNNTSKVQVLITTDVMSRGVDIND 523
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
+ +V+NYD P + YIHR GRTARA G + +L
Sbjct: 524 ITDVLNYDVPISSQQYIHRCGRTARAQSKGTAYNML 559
>gi|387592705|gb|EIJ87729.1| hypothetical protein NEQG_02276 [Nematocida parisii ERTm3]
gi|387595334|gb|EIJ92959.1| hypothetical protein NEPG_02358 [Nematocida parisii ERTm1]
Length = 427
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 195/436 (44%), Gaps = 105/436 (24%)
Query: 31 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 90
S TG+GKTL+Y+LPI+ +L N R A+++LPTR+L+ QV++
Sbjct: 50 SNTGTGKTLAYSLPILHSLLNDD-RYFYAMIILPTRELSQQVHA---------------- 92
Query: 91 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 150
V + I +GL L +G + + L RP
Sbjct: 93 -----------------------VLSDIGAEIGLRTTLLIGAVDLLVQGKSLAARPH--- 126
Query: 151 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 210
I++ TPGR+ H+ T+G TL YLV+DE DRLL +
Sbjct: 127 ------------------IIIGTPGRIYHHLRNTKGITLSSFKYLVLDECDRLLDNDFDG 168
Query: 211 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 270
+ +L+L P+ + + SATL
Sbjct: 169 DINGILELIS--------------------------------------PKYI-FLFSATL 189
Query: 271 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 330
T+ N +++PL + +PE + + K K +YL ++++SLG KCI
Sbjct: 190 TKRVNAFKNKRMNNPLLYNVQKDE-GIPENISQQYVYLPQKYKEVYLYSIIRSLGSRKCI 248
Query: 331 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
VF + + ++ +L E I G + Q VR++T++ FR G+ VL+S+D +
Sbjct: 249 VFVKTCITAEKIERMLRSLDESVCSI---HGNKSQEVRTETIEMFRRGRYSVLISTDVVA 305
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
RGMD+EG+ ++NYD P K YIHR GRT RAG+ G TL+ + +V+ F+KL K D
Sbjct: 306 RGMDMEGIKIIINYDMPDGHKEYIHRIGRTGRAGETGSSITLVTQYDVEEFRKLEVKLDL 365
Query: 451 DSCPIHSIPSSLIESL 466
+SI S LI SL
Sbjct: 366 -KMDEYSISSDLIYSL 380
>gi|345563939|gb|EGX46922.1| hypothetical protein AOL_s00097g348 [Arthrobotrys oligospora ATCC
24927]
Length = 668
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 207/491 (42%), Gaps = 121/491 (24%)
Query: 1 MGISSLFPVQVAVW-----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
+G FPVQ A+ + P DL +++ TGSGKTLSY LPI+ +L NR V
Sbjct: 204 LGFKDTFPVQSALLPLLLPDNRLPPSTPRSDLLVSAATGSGKTLSYLLPILASLINRIVP 263
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
AL+++PT +LA QV R +
Sbjct: 264 HTYALIIVPTHELATQVQ--RTAH------------------------------------ 285
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
++A L + A+G S E +I G DIL+ATPG
Sbjct: 286 -SLAAGTSLKISTAIGTRSFEVEKDHIIANDIGSTG---------------ADILIATPG 329
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV---LQ--LTRSDNENRFSDA 230
RL++HI FTL HL +LVVDE DRLL +++Q W+ V LQ +R D + F
Sbjct: 330 RLVEHIRNNPQFTLRHLQWLVVDEADRLLSQSFQDWVEVVGDELQKPFSREDEQGGFDIT 389
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
S L + + T+R K++LSAT+T+D +LA L L P +
Sbjct: 390 SMGLRTPKRAADTVR-----------------KVILSATMTRDVGRLAGLKLRRPQLIAV 432
Query: 291 ----------------GETR----------YKLPERLES-YKLICESKLKPLYLVALL-Q 322
GE + LP LE Y + KPL L LL
Sbjct: 433 DDIGGQEMAIDGSDNDGEDQETADKGLRELNSLPSTLEEHYYPVSNPTQKPLILAKLLSD 492
Query: 323 SLGEEKCIVFTSSVESTHRLCTLLN-----HFGELR-------IKIKEYSGLQRQSVRSK 370
S + +VFT S ES RL LL G+ R +I + +R+ S
Sbjct: 493 SQTKSGILVFTKSNESASRLARLLELLFAKKLGKKRKGSSGKDWRIAVSTSDKRKKEISA 552
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
F+ I +L+S+D M RG+D+ V+NYD P K YIHR GRTARAG G +
Sbjct: 553 NTSKFKASTIDILISTDLMGRGVDLPNAQLVINYDSPRNEKDYIHRVGRTARAGNKGITW 612
Query: 431 TLLHKDEVKRF 441
+L+ E + +
Sbjct: 613 SLVEDSEARWW 623
>gi|444321634|ref|XP_004181473.1| hypothetical protein TBLA_0F04210 [Tetrapisispora blattae CBS 6284]
gi|387514517|emb|CCH61954.1| hypothetical protein TBLA_0F04210 [Tetrapisispora blattae CBS 6284]
Length = 639
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 220/471 (46%), Gaps = 119/471 (25%)
Query: 7 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 53
FP+Q + +T+ P L F R D+ +N+ TGSGKTL Y +PI+Q LS+R
Sbjct: 194 FPIQ-TILLDTVLPILNFSLSITKKHFTRRVGDILVNASTGSGKTLGYCIPIIQALSSRK 252
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V LR+L++LPT+ L + QV D
Sbjct: 253 VNKLRSLIILPTKLL---------------------------------------INQVFD 273
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ +A L + ++ ++S+ +E + +K+ +P DIL+ T
Sbjct: 274 TLSKLAEGTSLIISISKLENSLKEEHQKFLKQ---------EP-----------DILIMT 313
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ L++L LV+DE DRLL +++Q W ++
Sbjct: 314 PGRLVDHL-QLNSINLKNLKMLVLDEADRLLNQSFQNWCSELMN---------------- 356
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 292
+ +E+ DK ++K V SATLT + KL +L + P LF+
Sbjct: 357 ------------KIKLEKN--DKLPGNIIKFVFSATLTTNTEKLNKLQFYKPKLFIMDTV 402
Query: 293 TRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
Y LP L+ + + +S KPL L+ L +L K +VF S E++ RL +LL
Sbjct: 403 KLYNLPTTLQEFNINIPTAKSVYKPLILLRLFANLKRSKILVFVKSNEASLRLASLLKMM 462
Query: 350 GE--LRIKIKEYSGLQRQSVRS---KTLKAFR---EGKI-QVLVSSDAMTRGMDVEGVNN 400
+ L + ++ S + + R+ + + AF E I ++L+++D ++RG+D+ + +
Sbjct: 463 NDKNLITETQDISSINSNNSRTDNKRLVNAFSSTIENSINKILITTDLISRGIDINDITH 522
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 451
V+NYD P + Y+HR GRTARAG G+ + +L K+F Q+ DND
Sbjct: 523 VINYDLPISSQQYVHRCGRTARAGSEGQAYNMLVGKGEKQF--WTQQIDND 571
>gi|50288559|ref|XP_446709.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661318|sp|Q6FST5.1|DBP6_CANGA RecName: Full=ATP-dependent RNA helicase DBP6
gi|49526017|emb|CAG59636.1| unnamed protein product [Candida glabrata]
Length = 651
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 216/454 (47%), Gaps = 115/454 (25%)
Query: 5 SLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNR 52
S FP+Q A+ + + F R D+ +N+ TGSGKTL+Y++PI+QTLS+R
Sbjct: 215 STFPIQTAMLDQYLKLINFTLKTSKKNFTRRIGDILVNASTGSGKTLAYSIPIIQTLSSR 274
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V LR L++LPT+ L QV F ++ Q
Sbjct: 275 TVNKLRVLIILPTKLLINQV--------------------------------FQTMSQ-- 300
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+A L + ++ ++S +E L+K + DI +
Sbjct: 301 -----LAEGTSLVITVSKLENSFNEEHKRLLK--------------------TEPDIFIT 335
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL+DH+ +L +L +LV+DE DRLL +++Q W+P V+ +SD ++
Sbjct: 336 TPGRLVDHL-TNSSISLRNLKFLVLDEADRLLNQSFQNWIPEVMSKFKSDKFDQ------ 388
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG 291
+P + ++KMV SATLT + KL L L++P LF T
Sbjct: 389 -MPGS-----------------------IIKMVFSATLTTNTEKLNDLQLYNPTLFATDS 424
Query: 292 ETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN- 347
Y LP L+ Y+L +S KPLYL+ LL+ L K +VF S ES+ +L LL
Sbjct: 425 VKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLSGGKTLVFVRSNESSLKLEVLLKS 484
Query: 348 ----HFGELRIKIKEYSGLQRQSVRSKTLKAFRE----GKIQVLVSSDAMTRGMDVEGVN 399
H L+I + + ++ + + F + + VL+++D M+RG+D+E +
Sbjct: 485 LIKGHMTTLQIVVHSINSNNSKAENRRLVTDFTKESLPNQTNVLITTDLMSRGIDIENIA 544
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
NV+NYD P + Y+HR GRTARA + G+ + +L
Sbjct: 545 NVINYDVPISSQQYVHRCGRTARANKDGKAYNML 578
>gi|410078027|ref|XP_003956595.1| hypothetical protein KAFR_0C04690 [Kazachstania africana CBS 2517]
gi|372463179|emb|CCF57460.1| hypothetical protein KAFR_0C04690 [Kazachstania africana CBS 2517]
Length = 629
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 206/443 (46%), Gaps = 108/443 (24%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PI+QTLSNR + LR L+++PT+ L QV
Sbjct: 234 DILVNASTGSGKTLAYSIPIIQTLSNRKINKLRCLIIVPTKMLIHQV------------- 280
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
F++L ++ L + + ++S+ +E S L
Sbjct: 281 --------------FETL------------QKLSSGTSLVISTSKLENSLREEHSRL--- 311
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
LQ DIL+ TPGRL+D + + + +L++L +LV+DE DRLL
Sbjct: 312 -----------------LQVEPDILIITPGRLVDLL-SMKSISLKNLKFLVLDEADRLLN 353
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W +L +D S T LP +VKMV
Sbjct: 354 QSFQNWSEELLHSLNNDK----SQVDT-LPG-----------------------NVVKMV 385
Query: 266 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKLICESKLKPLY-------- 316
SATLT + KL L L++P LFLT Y LP++L+ IC K LY
Sbjct: 386 FSATLTTNTEKLNTLRLYNPKLFLTQSVKLYNLPKKLQETN-ICIPTAKSLYKPLFLLHL 444
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE-----LRIKIKEYSGLQRQSVRSKT 371
L +Q + K ++F S E++ RL TLL+ E + I + +S +K
Sbjct: 445 LKKKVQESIDNKILIFVKSNEASLRLATLLSVMAEKFNSSTSLLINSINSNNTKSQNNKI 504
Query: 372 LKAFREGK---IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
+ F + K + +L+++D M+RG+D+ + NV+NYD P + Y+HR GRTARA G
Sbjct: 505 VNEFGQNKGSSMHILITTDLMSRGIDINSITNVINYDLPISSQQYVHRVGRTARANMDGN 564
Query: 429 CFTLLHKDEVKRFKKLLQKADND 451
LL ++F Q+ D D
Sbjct: 565 AINLLVGKGERKFWN--QQIDED 585
>gi|68490215|ref|XP_711056.1| hypothetical protein CaO19.11188 [Candida albicans SC5314]
gi|68490244|ref|XP_711043.1| hypothetical protein CaO19.3704 [Candida albicans SC5314]
gi|74656092|sp|Q59MW2.1|DBP6_CANAL RecName: Full=ATP-dependent RNA helicase DBP6
gi|46432316|gb|EAK91804.1| hypothetical protein CaO19.3704 [Candida albicans SC5314]
gi|46432330|gb|EAK91817.1| hypothetical protein CaO19.11188 [Candida albicans SC5314]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 211/466 (45%), Gaps = 110/466 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER-------DLCINSPTGSGKTLSYALPIVQTLSNRA 53
MG + F VQ++V + ++ D+ +N+ TGSGKTL+Y++PI+++L R
Sbjct: 187 MGFTEAFSVQISVLNMMLPEIEAQKLKPDRVGDILVNASTGSGKTLAYSIPIIESLYRRV 246
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +R ++++PT+ L + QVK
Sbjct: 247 VPRVRVIILVPTKPL---------------------------------------INQVKS 267
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
++ L + SI DE L K S DI+V+T
Sbjct: 268 TLLQLSSGTNLQIAALKNDVSINDEKDSLTK--------------------SVPDIIVST 307
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL++H+ L L YL++DE DRLL +++Q W +L S
Sbjct: 308 PGRLVEHL-LNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKIDSQ----------- 355
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
++ + + V+ K+V SATLT D KL+ L ++P + ++
Sbjct: 356 -----INIAEVWKLSVQ------------KLVFSATLTTDAGKLSSLKFYNPRLIIVNDS 398
Query: 294 R------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLC 343
+ + +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL
Sbjct: 399 KQLVNEIFTVPVTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLT 458
Query: 344 TLL-NHFGELRIKIKE---YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
LL + F +L I +K S R S+RSK LK F ++ +L+++D + RG+DV +
Sbjct: 459 ELLISLFQKLSINLKIAFINSTNNRTSIRSKILKQFSNQEVNILITTDLIARGIDVASIT 518
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKL 444
+V+NYD P + Y+HR GRTARA Q+G ++ K E F KL
Sbjct: 519 DVINYDLPNSSREYVHRVGRTARANQVGYAYSFCFGKGENSWFNKL 564
>gi|207341548|gb|EDZ69573.1| YNR038Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 515
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 81 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 139
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR ++++PT+ L + Q
Sbjct: 140 KRQINRLRCIIIVPTKLL---------------------------------------INQ 160
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
V + L V +A ++S+ DE +L LE DIL
Sbjct: 161 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 200
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 201 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 255
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 256 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 289
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 290 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 349
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 384
L LL E R + LQ ++ K + F I +L+
Sbjct: 350 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 409
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 410 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 469
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 470 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 501
>gi|403215284|emb|CCK69783.1| hypothetical protein KNAG_0D00300 [Kazachstania naganishii CBS
8797]
Length = 637
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 217/459 (47%), Gaps = 124/459 (27%)
Query: 7 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 53
FP+Q A+ +TI P + F R D+ +N+ TGSGKTLSY +P+VQTLS+R
Sbjct: 210 FPIQTAIL-DTILPTINTTYKITKRNFTRRVGDVLVNAATGSGKTLSYTIPLVQTLSSRT 268
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V LRAL+++PT+ L + QV D
Sbjct: 269 VNRLRALILVPTKPL---------------------------------------IHQVYD 289
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ + V + ++S+ +E +LI S DIL+ T
Sbjct: 290 TLTKLIKGTNIIVSFSKLENSLREEHQKLIN--------------------SEPDILIVT 329
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DHIN + +L +L +LV+DE DRLL +++Q W ++Q ++ +N
Sbjct: 330 PGRLVDHINL-KSISLRNLKFLVLDEADRLLNQSFQNWCHELMQQLDTEKQNV------- 381
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYP-RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG 291
P P ++KMV SATLT + KL L L++P LF+T
Sbjct: 382 ----------------------DPMPGNVIKMVFSATLTTNTAKLHDLKLYNPRLFVTDS 419
Query: 292 ETRYKLPERLESYKL---ICESKLKPLYLVALLQ----SLGEE----KCIVFTSSVESTH 340
Y LP L+ Y + +S KPL+L+ LLQ + GEE K +VF S +++
Sbjct: 420 VKLYNLPPTLQEYNIHIPTAKSLYKPLFLLRLLQLKTTTEGEEKQRAKVLVFVKSNQNSL 479
Query: 341 RLCTL---LNHFGELRIKIKEYSGLQRQSVRSKTLKAF-RE--GKIQVLVSSDAMTRGMD 394
RL +L LN G++ + + + + R L F RE QVL+++D M+RG+D
Sbjct: 480 RLASLLQILNKEGDMTVHSINSNNSKVDNKR--LLAEFSRETASSTQVLITTDLMSRGID 537
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
+ + +VVNYD P + Y+HR GRTARA G + LL
Sbjct: 538 INNITDVVNYDVPLSSQQYVHRCGRTARANAAGFAYNLL 576
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 199/440 (45%), Gaps = 107/440 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P ++ V E I L +DL + TGSGKT ++ALP +Q L S +V A V+ P
Sbjct: 33 PTKIQV--EAIPHALEGKDLIALAQTGSGKTAAFALPTLQALLQASVTSVPVFYACVLSP 90
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+Q IAE F A+ +GL
Sbjct: 91 TRELAIQ---------------------IAEQ------------------FEALGSDIGL 111
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ VG + + L KRP I+V TPGRL+DH++ T
Sbjct: 112 RCAVLVGGVDMGLQTIALAKRP---------------------HIVVGTPGRLLDHLSNT 150
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+GF+L L YL++DE DRLL E ++ L +L + D + T+L
Sbjct: 151 KGFSLRTLKYLILDEADRLLNEEFEKSLDEILTVISRDRK-------TYL---------- 193
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
SAT+T+ KL + L +P+ + ++Y + E L
Sbjct: 194 ---------------------FSATMTKKVRKLQRACLRNPVKIEVA-SKYSVVETLRQQ 231
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
L C +K K YLV L +VFT + ++TH L +L + G I I +G
Sbjct: 232 LLFCPAKYKECYLVHALTLKSGASTMVFTRTCDATHFLALVLRNLGLRAIPI---NGHMS 288
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS R L F+ G+ +L+ +D +RG+D+ V+ VVNYD P K YIHR GRTARAG
Sbjct: 289 QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVVNYDIPTNSKDYIHRVGRTARAG 348
Query: 425 QLGRCFTLLHKDEVKRFKKL 444
+ G +L++++E+ FK++
Sbjct: 349 RSGLAISLVNQNEIGWFKQI 368
>gi|291001239|ref|XP_002683186.1| predicted protein [Naegleria gruberi]
gi|284096815|gb|EFC50442.1| predicted protein [Naegleria gruberi]
Length = 610
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 214/495 (43%), Gaps = 126/495 (25%)
Query: 3 ISSLFPVQVAVWQETIG------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
+ LF VQ AV I PG D+CI SPTGSGKTLSY LPIV+ LS+
Sbjct: 156 VRELFAVQRAVVPVLIAMTKSGVPG----DICIGSPTGSGKTLSYVLPIVEVLSSLKFTK 211
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
LRA+V++P L + QV VF
Sbjct: 212 LRAIVIVPNSQL---------------------------------------VKQVTQVFR 232
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
+ L V + E S+L+ D L S VDIL+ TP
Sbjct: 233 SFEKYTSLKVKSLNPYNRFESEQSDLV--------------DSLTG-DSKVDILIGTPSL 277
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
++HI T+ FTLEHL +LV DE D LL + + +++ + A T+
Sbjct: 278 FVEHIKKTKNFTLEHLKFLVYDEVDTLLSDEHSSFIKVI--------------ADTY--- 320
Query: 237 AFGSLKTIRRCGVERGFKDKPYP---RLVKMVL-SATLTQDPNKLAQLDLHHPLFLT--- 289
+ I R + + P P +++ SAT+T KL + L+ P F T
Sbjct: 321 -YNCTSVISRRAKTQIIPNIPLPVAHSFARIICCSATITSHAGKLDIIRLNRPQFFTYLA 379
Query: 290 -----TGE------------TRYKLPERLESYKLICESKLKPLYLVALL--QSLGEEKCI 330
+ E +Y +P+ L + + E+ KPLYL+ALL +K +
Sbjct: 380 PAKLRSAEDMSTSLDDPLVGKKYYIPDTLAQFIVKYEAVTKPLYLIALLLDNKCRSKKTL 439
Query: 331 VFTSSVESTHRLCTLL------------NHFG---ELRIKIKEYSGLQRQSVRSKTLKAF 375
VF + ++ HRL LL + FG EL K EY + + L F
Sbjct: 440 VFCNDSQTAHRLNLLLETAVSEGAFNSKDAFGIAPELNTKFSEYYN-PKDKKSTTILNNF 498
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
R+G VL+ +D + RG D+E V+ V+NYD P +KTYIHR GRTARA + G FT L
Sbjct: 499 RKGHFNVLICTDVIGRGFDIE-VDFVINYDAPLTLKTYIHRIGRTARAEKEGTSFTFLTG 557
Query: 436 DEVKRFK-KLLQKAD 449
E++ +K KL +A+
Sbjct: 558 PEIETYKSKLTSRAE 572
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 200/432 (46%), Gaps = 102/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L RD+ + TGSGKT ++ALPI+Q L R L AL++ PTR+LA Q+
Sbjct: 56 IQKEAIPVALQGRDIIGLAETGSGKTAAFALPILQALLENPAR-LFALILTPTRELAFQI 114
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ + VG
Sbjct: 115 S---------------------------------------EQFEALGSTIGIKSAVIVGG 135
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P +++ATPGRL+DH+ T+GFTL++L
Sbjct: 136 IDMMTQAMMLAKKPH---------------------VVIATPGRLIDHLENTKGFTLKNL 174
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ +N +
Sbjct: 175 RYLVMDEADRILNMDFEEEVDKILKVIPRENRRTY------------------------- 209
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + T+Y+ ++L+ Y L +K
Sbjct: 210 ------------LYSATMTKKVAKLQRASLTDPVRVEVS-TKYQTVDKLQQYYLFIPAKY 256
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++LV LLQ L + IVF ++ T +L +L + G I + G Q+ R L
Sbjct: 257 KEVHLVHLLQDLAGQSFIVFCATCNGTQKLALMLRNLGFTAIPL---HGQMSQAKRLGAL 313
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
+ F+ +L+++D RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ T
Sbjct: 314 QKFKAQARNILLATDVAARGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGKAVTF 373
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 374 VSQYDVELYQRI 385
>gi|259148989|emb|CAY82233.1| Dbp6p [Saccharomyces cerevisiae EC1118]
gi|323346760|gb|EGA81041.1| Dbp6p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763421|gb|EHN04950.1| Dbp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 229/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR ++++PT+ L QV + K
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTK-------------------------------- 281
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ L V +A ++S+ DE +L LE DIL
Sbjct: 282 -------LTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 384
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|50838814|ref|NP_001002869.1| probable ATP-dependent RNA helicase DDX27 [Danio rerio]
gi|49618925|gb|AAT68047.1| DEAD box polypeptide 27 [Danio rerio]
Length = 776
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 215/473 (45%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A + GL +D+C + TG+GKT ++ LP+++ L R + R
Sbjct: 219 MGFKQPTPIQKAC----VPVGLLGKDICACAATGTGKTAAFMLPVLERLIYKPRETQVTR 274
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV H++A QF ++
Sbjct: 275 VLVLVPTRELGIQV------------------HTVARQLAQFTTI--------------- 301
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
S LAVG + + EA + P D+L+ATPGRL+
Sbjct: 302 ------STCLAVGGLDLKSQ----------EAALRAGP-----------DVLIATPGRLI 334
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F L + L++DE DR+L E ++ + +
Sbjct: 335 DHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEI----------------------- 371
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C +R M+ SAT++++ LA + L P+ + P
Sbjct: 372 -----IRMCAYQRQT----------MLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAP 416
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I +K + + ALL ++ ++FT + + HR+ LL G +K+
Sbjct: 417 YLRQEFVRIRPNKEGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMG---LKV 473
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R ++L+ F++ +I +LV++D RG+D+EGV V+N+ P +K Y+HR
Sbjct: 474 GELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHR 533
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG++GR +L+ + E K K++++KA P+ + IP +I R
Sbjct: 534 VGRTARAGKVGRSVSLVGETERKMLKEIVKKA---KFPVKARVIPQEVILKFR 583
>gi|6324366|ref|NP_014436.1| Dbp6p [Saccharomyces cerevisiae S288c]
gi|1730678|sp|P53734.1|DBP6_YEAST RecName: Full=ATP-dependent RNA helicase DBP6; AltName: Full=DEAD
box protein 6
gi|1302541|emb|CAA96318.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814686|tpg|DAA10580.1| TPA: Dbp6p [Saccharomyces cerevisiae S288c]
gi|392297030|gb|EIW08131.1| Dbp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 629
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 229/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR ++++PT+ L QV + K
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTK-------------------------------- 281
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ L V +A ++S+ DE +L LE DIL
Sbjct: 282 -------LTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 384
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|160380625|sp|A6ZSB3.1|DBP6_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP6; AltName: Full=DEAD
box protein 6
gi|151944567|gb|EDN62845.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
Length = 629
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 229/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR ++++PT+ L QV + K
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTK-------------------------------- 281
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ L V +A ++S+ DE +L LE DIL
Sbjct: 282 -------LTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 384
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILI 523
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 195/438 (44%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F A+ +E I L +D+ + TGSGKT ++ALPI+Q L ++ + L L++ PTR
Sbjct: 94 FKRPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLILAPTR 152
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ F A+ + +
Sbjct: 153 ELAYQISQQ---------------------------------------FEALGSLISVRC 173
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 174 AVIVGGMDMVPQAVALAKKPH---------------------IVVATPGRLLDHMENTKG 212
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+++H YLV+DE DRLL + L +LQ D RR
Sbjct: 213 FSVKHFKYLVMDEADRLLDLDFGPILDKILQELNRD----------------------RR 250
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
M+ SAT++ N L + L +P+ ++ E+ Y+ + L +
Sbjct: 251 T----------------MLFSATMSTKLNSLTRAALQNPVRVSISESSYQTVKNLMQRYM 294
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K +YLV LL + CI+FT ++ T R+ +L G I + G QS
Sbjct: 295 FIPHKYKDIYLVYLLDEFAGKTCIIFTRTIHETQRIAYVLRALGRSAIPLH---GQMNQS 351
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+
Sbjct: 352 ARLGALNKFRGGSRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKS 411
Query: 427 GRCFTLLHKDEVKRFKKL 444
G +++ + +++ ++++
Sbjct: 412 GVAISIVTQYDIEIYQRI 429
>gi|190408963|gb|EDV12228.1| ATP-dependent RNA helicase DBP6 [Saccharomyces cerevisiae RM11-1a]
Length = 629
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 229/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNASKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR ++++PT+ L QV + K
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTK-------------------------------- 281
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ L V +A ++S+ DE +L LE DIL
Sbjct: 282 -------LTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 384
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|256273352|gb|EEU08290.1| Dbp6p [Saccharomyces cerevisiae JAY291]
Length = 629
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 227/509 (44%), Gaps = 133/509 (26%)
Query: 7 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 53
FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL R
Sbjct: 198 FPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLFKRQ 256
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
+ LR ++++PT+ L QV + K
Sbjct: 257 INRLRCIIIVPTKLLINQVYTTLTK----------------------------------- 281
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ L V +A ++S+ DE +L LE DIL+ T
Sbjct: 282 ----LTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DILITT 317
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 318 PGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT------- 369
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 292
LP ++KM+ SATLT + KL L+L+ P LFL +
Sbjct: 370 LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTD 406
Query: 293 TRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHRLCT 344
Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ RL
Sbjct: 407 KLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSK 466
Query: 345 LLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLVSSD 387
LL E R + LQ ++ K + F I +L+++D
Sbjct: 467 LLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILITTD 526
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKKLLQ 446
M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F L +
Sbjct: 527 IMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDDLNK 586
Query: 447 KADNDSCPIH--SIPSSLIESLRPVYKSG 473
D D + + +L+ES +Y S
Sbjct: 587 DLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|323303225|gb|EGA57024.1| Dbp6p [Saccharomyces cerevisiae FostersB]
Length = 629
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 229/512 (44%), Gaps = 133/512 (25%)
Query: 4 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 50
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 51 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 110
R + LR ++++PT+ L QV + K
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTK-------------------------------- 281
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ L V +A ++S+ DE +L LE DIL
Sbjct: 282 -------LTQGXSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 289
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 290 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 341
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 342 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAFRE----GKIQVLV 384
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSGSAGITILI 523
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 443
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 444 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|349580973|dbj|GAA26132.1| K7_Dbp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 629
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 213/477 (44%), Gaps = 119/477 (24%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PIVQTL R + LR ++++PT+ L
Sbjct: 229 DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLL----------------- 271
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
+ QV + L V +A ++S+ DE +L
Sbjct: 272 ----------------------INQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL--- 306
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
LE DIL+ TPGRL+DH+N + L++L +L++DE DRLL
Sbjct: 307 SNLEP-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLN 348
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W P ++ ++D + LP ++KM+
Sbjct: 349 QSFQGWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMI 378
Query: 266 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-AL 320
SATLT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++
Sbjct: 379 FSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSI 438
Query: 321 LQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR------------ 364
Q + K ++F S ES+ RL LL E R + LQ
Sbjct: 439 CQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNN 498
Query: 365 -QSVRSKTLKAF----REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
++ K + F I +L+++D M+RG+D+ + V+NYD P + Y+HR GR
Sbjct: 499 SKAENKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGR 558
Query: 420 TARAGQLGRCFTLL-HKDEVKRFKKLLQKADNDSCPIH--SIPSSLIESLRPVYKSG 473
TARA +LG + LL + E F L + D D + + +L+ES +Y S
Sbjct: 559 TARANELGSAYNLLVGRGERTFFDDLNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|320581353|gb|EFW95574.1| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6) [Ogataea
parapolymorpha DL-1]
Length = 549
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 212/467 (45%), Gaps = 107/467 (22%)
Query: 1 MGISSLFPVQVAVWQ--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
GI+S F VQ+ V + I P F D +N+ TGSGKTL+Y +PIVQ+L R
Sbjct: 114 FGITSAFSVQINVIESLLKDISANKIDPTPF-GDYLVNASTGSGKTLAYLIPIVQSLIGR 172
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V LR ++++PT+ L QV S NI L I + ++ D +S+ +
Sbjct: 173 VVPRLRCIILVPTKPLITQVYS--------NILQLTKGLDINALALRSD----VSVKEEA 220
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
AAI P DI+V+
Sbjct: 221 KKLAAIKP-----------------------------------------------DIVVS 233
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL++H+ G L L +LVVDE DRLL +++Q W T++ T+ +N+ ++ +
Sbjct: 234 TPGRLVEHL--LNGMDLSQLRFLVVDEADRLLNQSFQNWCDTLI--TKLENDQKYGEGED 289
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
F S T++ C K++ SATLT D KL L L P +
Sbjct: 290 FYNSY-----TVK-CS--------------KLIFSATLTTDSEKLFHLKLFKPKLVVINN 329
Query: 293 TR------YKLPERLESYKLICESKL---KPLYLVALL-QSLGEEKCIVFTSSVESTHRL 342
Y++P L+ + KL KP+ L+ L Q +VFT S ES RL
Sbjct: 330 AEQLVNELYQIPPNLDEKFVRVNEKLAFFKPMVLLRYLEQPEYSSHGLVFTKSNESAIRL 389
Query: 343 CTLLNHFGE---LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
LL E L + I + + R+K LK F E + +L+++D + RGM++E +
Sbjct: 390 ARLLTLLSEKLGLDLNIMSVNYSLKSHERAKILKKFHE-EGGILIATDLIARGMNIESIK 448
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD-EVKRFKKLL 445
V+NYD P K YIHR GRTARA + G TL D + + FK+L+
Sbjct: 449 FVLNYDLPLSTKEYIHRVGRTARANRHGTAVTLCFGDGDFRWFKRLV 495
>gi|241959124|ref|XP_002422281.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645626|emb|CAX40285.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 605
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 214/466 (45%), Gaps = 110/466 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER-------DLCINSPTGSGKTLSYALPIVQTLSNRA 53
MG + F VQ++V + + ++ D+ +N+ TGSGKTL+Y++PI+++L R
Sbjct: 186 MGFTEAFSVQISVLKMMLPEIEAQKLKPDRVGDILVNASTGSGKTLAYSIPIIESLHRRV 245
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RA++++PT+ L + QVK
Sbjct: 246 VPRVRAIILVPTKPL---------------------------------------INQVKS 266
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
++ L + SI DE +L+ R S DI+V+T
Sbjct: 267 TLLQLSSGTNLQIVALKNDISINDE-KDLLTR-------------------SVPDIIVST 306
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL++H+ + +L L YL++DE DRLL +++Q W +L
Sbjct: 307 PGRLVEHL-LSDSISLSSLQYLIIDEADRLLNQSFQNWSNVLLD---------------- 349
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
K + + +K + K+V SATLT D KL+ L ++P + ++
Sbjct: 350 --------KIDTKINIAEVWK----LSVQKLVFSATLTTDAGKLSSLKFYNPRLVIVNDS 397
Query: 294 R------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLC 343
+ + +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL
Sbjct: 398 KQLVNEIFTVPMTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLT 457
Query: 344 TLLNH-FGELRIKIKE---YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
LL F +L + + S R S+RSK LK F ++ +LV++D + RG+DV +
Sbjct: 458 ELLTSLFQKLSVNLNVAFINSTNNRTSIRSKILKKFSNQEVNILVTTDLIARGIDVASIT 517
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKL 444
+V+NYD P + Y+HR GRTARA Q+G ++ K E F KL
Sbjct: 518 DVINYDLPNSSREYVHRVGRTARANQVGYAYSFCFGKGENSWFNKL 563
>gi|119618949|gb|EAW98543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sapiens]
Length = 291
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 16/229 (6%)
Query: 257 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ETRYKLPERLE 302
P L K++ SATLTQ+P KL QL LH P +TG +Y P L
Sbjct: 46 PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLT 105
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+ + C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 106 HHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSR 163
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR GRTAR
Sbjct: 164 YGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTAR 223
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 471
AG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 224 AGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 272
>gi|449017342|dbj|BAM80744.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 592
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 224/503 (44%), Gaps = 140/503 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRA 59
I+ LFP Q V L D+ + +PTGSGKTL YAL ++ L S+ ++ C+RA
Sbjct: 76 AITHLFPFQKEVLAYIRSTALTHSGDVLLGAPTGSGKTLIYALAVLLDLYSSASLFCVRA 135
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVVLPTR+LA QV + IF + + V SLL +P+
Sbjct: 136 LVVLPTRELARQV---------EGIFRTLTASAKLSARVAVLSLLRERVPR--------- 177
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
S+L+ R +C + TPGRL++
Sbjct: 178 --------------------SDLLNR----QAVC-----------------ITTPGRLVE 196
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
++ L L +LV+DE DRL R++YQ WL +LQ
Sbjct: 197 ALD-RHELLLADLRWLVIDEADRLFRQSYQNWLERLLQ---------------------- 233
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-----TTG--- 291
R R D P RL K++ SAT T+D LA L LHHP++L T G
Sbjct: 234 ------RIDCARRVLDPPLRRLRKLLFSATQTRDATHLAALRLHHPVYLLCHASTEGARQ 287
Query: 292 --ETRYKLPERLESYKLIC-------ESKLKPLY--------LVALLQSLGEE------- 327
+ R L +++ + +C E KL+ L ++A L+ ++
Sbjct: 288 PSKLRRGLMDQVPAGLTLCSLRFLSEEDKLRFLLRLIVCGPDILATLRDPSDQSSRPDHN 347
Query: 328 KCIVFTSSVESTHRLCTL---------LNHFGE--------LRIKIKEYSGLQRQSVRSK 370
+ ++F SVE+THRLC L H+ R+ +E S +S R+
Sbjct: 348 RMLIFVKSVETTHRLCRFVQLASNWLWLRHYPSPVSTRDRGPRLLAEEISKQVSESARAA 407
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
TL+ F+ G Q L+ SD M RGMD+ ++VVN+D PA+ TY+HR GR ARAG+ G
Sbjct: 408 TLERFQRGTTQWLICSDVMARGMDIAEASHVVNFDVPAHPTTYLHRVGRVARAGRPGTAL 467
Query: 431 TLLHKDEVKRFK-KLLQKADNDS 452
T L +++V F+ +++ + ND+
Sbjct: 468 TFLLRNQVGYFQSEIIARVRNDT 490
>gi|448535807|ref|XP_003871022.1| Dbp6 protein [Candida orthopsilosis Co 90-125]
gi|380355378|emb|CCG24896.1| Dbp6 protein [Candida orthopsilosis]
Length = 609
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 211/463 (45%), Gaps = 110/463 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--------DLCINSPTGSGKTLSYALPIVQTLSNRA 53
G + F VQV+V + TI P + D+ +N+ TGSGKTL+Y++PIVQ L +R
Sbjct: 188 GFNEAFAVQVSVLK-TIIPEIIANKRRPDAFGDILVNASTGSGKTLAYSIPIVQALHDRV 246
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RA+V++PTR L + QVK
Sbjct: 247 VPRVRAIVLVPTRPL---------------------------------------INQVKT 267
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
++ LSV SI +E SE +K+ DI+V+T
Sbjct: 268 TMLQLSQGTNLSVVGLKNDISIKEE-SEKLKK-------------------MVPDIVVST 307
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL++H+N +L L +LV+DE DRLL +++Q W LT +E + D S
Sbjct: 308 PGRLVEHLNIN-SISLSGLRFLVIDEADRLLNQSFQNWSSV---LTNKIDEQQKRDIS-- 361
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
R + ++ K+V SATLT D KL+ L+ + P + +T
Sbjct: 362 -----------ERWSL----------KVQKLVFSATLTTDAGKLSNLNFYKPRLIIVNDT 400
Query: 294 R------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLC 343
+ +P L + + + ++ LKPL L L S + ++FT S ES RL
Sbjct: 401 EQLVNEMFSVPSLLSEFIIHYGVAKNSLKPLILAKFLASQKKLSNVLIFTKSNESCIRLS 460
Query: 344 TLLNHFGE---LRIKIKEYSGLQ-RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
LL + + I + + R SVR++ L+ F KI +L+++D + RG+D+ +
Sbjct: 461 KLLQLIMDAFSMSINVAFINSTNNRTSVRARVLRDFSTQKINILIATDLIARGIDLTTIT 520
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH-KDEVKRF 441
+V+NYD P + Y+HR GRTARA G + + K E K F
Sbjct: 521 DVINYDLPNSSREYVHRVGRTARAKNAGNAYNFVFGKGERKWF 563
>gi|50310747|ref|XP_455395.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660305|sp|Q6CKZ4.1|DBP6_KLULA RecName: Full=ATP-dependent RNA helicase DBP6
gi|49644531|emb|CAG98103.1| KLLA0F06941p [Kluyveromyces lactis]
Length = 630
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 212/461 (45%), Gaps = 122/461 (26%)
Query: 4 SSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGKTLSYALPIVQTLSN 51
S FP+Q ++ + + LF R D+ +N+ TGSGKTL+Y++P+VQ L +
Sbjct: 196 SETFPIQTILFDKVLPLLNSSFKANRKLFTRRVGDILVNASTGSGKTLAYSVPLVQILRS 255
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
R V +RA++++PT+ I + QV
Sbjct: 256 RTVNKVRAIILVPTK---------------------------------------ILIHQV 276
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
D + ++ L+V ++ ++S+ +E ++ L ++ DIL+
Sbjct: 277 YDCLSKLSQGTSLNVSMSKLENSLKEEHNKF--------------------LYNSPDILI 316
Query: 172 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
TPGRL+DH+ F L+ L +LV+DE DRLL +++Q W + +D ++
Sbjct: 317 ITPGRLVDHLQM-ESFDLKTLKFLVLDEADRLLNQSFQNWNQVLFHHLTNDKQD------ 369
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 290
+R G ++KMV SATLT + KL L LH+P +FLT
Sbjct: 370 -------------KRPG-----------NVIKMVFSATLTTNAEKLYNLYLHNPKIFLTD 405
Query: 291 GETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE-----KCIVFTSSVESTHRL 342
Y +P++L+ + +S KPL L+ ++ + K +VF S E++ RL
Sbjct: 406 SVKLYSIPKKLQELNVNIPTAKSLFKPLLLLRIIHDIKSSASRNAKILVFVKSNEASIRL 465
Query: 343 CTLLNHFGELRIKIKEY--------SGLQRQSVRSKTLKAF--REGKIQVLVSSDAMTRG 392
+LL+ I EY S + + S R K ++ F E K VL+S+D M RG
Sbjct: 466 ESLLHAMLGSGIIEDEYNMFLSSIHSNISKGSSR-KLIQEFASSEQKKSVLISTDIMARG 524
Query: 393 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
+D+ + +V+NYD P + Y+HR GRTARA G LL
Sbjct: 525 IDINEITHVINYDLPISSQQYVHRCGRTARANTEGIAINLL 565
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 195/442 (44%), Gaps = 102/442 (23%)
Query: 3 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 62
IS + A+ +E+I L +D+ + TGSGKT ++ALPI+Q L + LV+
Sbjct: 104 ISLGYKTPTAIQRESIPIALQGKDVIGLAETGSGKTAAFALPILQALLEKQDHYF-GLVL 162
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
PTR+LA Q++ F A+ +
Sbjct: 163 APTRELAYQISQQ---------------------------------------FEALGSLI 183
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
+ + VG + + L K+P I+VATPGRLMDH+
Sbjct: 184 NVKCAVIVGGMDMTPQQIALAKKPH---------------------IIVATPGRLMDHLE 222
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T+GF+L L YLV+DE DRLL + L +LQ+ LP
Sbjct: 223 NTKGFSLRKLKYLVMDEADRLLDLDFGPILDKILQV---------------LPRE----- 262
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 302
RR M+ SAT++ + L + L P+ ++ + Y+ + L+
Sbjct: 263 --RRT----------------MLFSATMSTKLDNLTRAALQSPVRVSISSSSYQTVKNLK 304
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+ K K +YLV L+ + CI+FT ++ T R+ LL G I + G
Sbjct: 305 QSYIFIPHKFKDIYLVYLVNEFAGQTCIIFTRTINETARIAFLLRALGRSAIPL---HGQ 361
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
QS R L FR G +LV++D RG+D+ V+ V+NYD P KTY+HR GRTAR
Sbjct: 362 LNQSARLGALNKFRGGSRDILVATDVAARGLDIPSVDLVLNYDLPPDSKTYVHRVGRTAR 421
Query: 423 AGQLGRCFTLLHKDEVKRFKKL 444
AG+ G +++ + +V+ ++++
Sbjct: 422 AGKAGVAISIVTQYDVEVYQRI 443
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 201/434 (46%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALP++QTL + R L ALV+ PTR+LA Q+
Sbjct: 21 IQREAIPLALEGKDIIGLAETGSGKTGAFALPVLQTLLDNPQR-LYALVITPTRELAFQI 79
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 80 S---------------------------------------EQFEALGSSIGIKCAVIVGG 100
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF+L L
Sbjct: 101 VDLMTQSLALTKKPH---------------------IVIATPGRLVDHLENTKGFSLRSL 139
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YL++DE DR+L ++ + +L++ + ST+L
Sbjct: 140 KYLIMDEADRILNMDFEEEVNKILKVIPKER-------STYL------------------ 174
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L +P+ + T+++ E+L+ + +K
Sbjct: 175 -------------FSATMTKKVAKLQRASLKNPVKVEVS-TKFQTVEKLQQSYIFIPNKF 220
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV++L L I+F + + R+C LL H G + + G Q+ R L
Sbjct: 221 KDCYLVSILNDLAGNSFIIFCGTCNNVQRVCLLLRHLGFHAVPL---HGQMTQAKRLGAL 277
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
++ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 278 NKYKSKSRTILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 337
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 338 VTQYDVELYQRIEQ 351
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 201/432 (46%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L D+ + TGSGKT ++A+PI+Q L + R L AL++ PTR+LA Q+
Sbjct: 48 IQREAIPVALQGSDIIGLAETGSGKTGAFAIPILQKLLDSPQR-LYALILTPTRELAFQI 106
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ A+G+ + VG
Sbjct: 107 S---------------------------------------EQFEALGSAIGVKCAVVVGG 127
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 128 IDMMSQSLMLAKKPH---------------------IIIATPGRLIDHLENTKGFNLRAL 166
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++ + +L++ + ST+L
Sbjct: 167 KFLVMDEADRILNMDFEQEVDKILKVIPRER-------STYL------------------ 201
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L +P+ + ++Y+ ++L+ Y L +K
Sbjct: 202 -------------YSATMTKKVAKLQRASLQNPVKVEVS-SKYQTVDKLQQYYLFVPAKF 247
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV++L L +VFTS+ +T R +L + G I + G QS R +L
Sbjct: 248 KDVYLVSVLNELAGNSFMVFTSTCANTQRTALMLRNLGLTAIPLH---GQMSQSKRLGSL 304
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 305 NKFKSKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 364
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 365 VSQYDVELYQRI 376
>gi|344303601|gb|EGW33850.1| hypothetical protein SPAPADRAFT_48957 [Spathaspora passalidarum
NRRL Y-27907]
Length = 621
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 214/467 (45%), Gaps = 114/467 (24%)
Query: 2 GISSLFPVQVAVWQ--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 53
++ F VQ+AV + P + + D+ +N+ TGSGKTL+Y++PI+++L R
Sbjct: 204 NFTNAFSVQIAVLNLMLQDIHDHKLQPDV-KGDILVNASTGSGKTLAYSIPIIESLHTRV 262
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V +RA++++PT+ L + QV+
Sbjct: 263 VPRIRAIILVPTKPL---------------------------------------INQVRS 283
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
++ LSV SI DE S+LI ++ DI+V+T
Sbjct: 284 TLLVLSKGTNLSVVSLKNDISIKDEASKLI--------------------ENVPDIIVST 323
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL++HI L L +LV+DE DRLL +++Q W Q+ S +N + A +
Sbjct: 324 PGRLVEHI-LQSSIDLSALQFLVIDEADRLLNQSFQNWC----QILLSKIDNNINIAEEW 378
Query: 234 -LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
LP + K++ SATLT D KL+ L P + +
Sbjct: 379 KLP-------------------------VQKLIFSATLTTDAGKLSSLQFQKPRLVIVND 413
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRL 342
+ + +P L +KL +S +KPL L L S G+ ++FT S ES+ RL
Sbjct: 414 EKELVNEIFTVPPTLSEFKLQFGSAKSSIKPLILTKFLISQGKLSNVLIFTKSNESSLRL 473
Query: 343 CTLLNH-FGELRIKIK---EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
LL F +L + S R S+R+K LK F I +LV++D + RG+D+ +
Sbjct: 474 SKLLQLLFSQLNKNVNIAYMNSTNNRSSIRTKILKEFSNQTINILVATDLIARGIDLVTI 533
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKL 444
++VNYD P + Y+HR GRTARA +G+ ++L K E+K F K+
Sbjct: 534 TDIVNYDLPNSSREYVHRVGRTARANNIGQAYSLCFGKGEIKWFDKI 580
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 193/438 (44%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F A+ +E I L +D+ + TGSGKT ++ALPI+Q L ++ + + LV+ PTR
Sbjct: 56 FTKPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQELLDKP-QPMFGLVLAPTR 114
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ F A+ + +
Sbjct: 115 ELAYQISQQ---------------------------------------FEALGSLISVRC 135
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 136 AVIVGGMDMVPQAIALAKKPH---------------------IVVATPGRLLDHLENTKG 174
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + L + Q+ LP RR
Sbjct: 175 FSLRQLKYLVMDEADRLLDLDFGPILDKIFQV---------------LPRE-------RR 212
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
M+ SAT++ N L + L P+ ++ + Y+ + L +
Sbjct: 213 T----------------MLFSATMSTKLNNLTRAALQQPVKVSISSSSYQTVKNLMQRYI 256
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K +YLV LL + CIVFT ++ T R+ LL G I + G QS
Sbjct: 257 FIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETARIAFLLRALGRSAIPLH---GQMNQS 313
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+
Sbjct: 314 ARLGALNKFRGGHRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKS 373
Query: 427 GRCFTLLHKDEVKRFKKL 444
G +++ + +++ ++++
Sbjct: 374 GVAISVVTQYDIEIYQRI 391
>gi|432859445|ref|XP_004069111.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Oryzias
latipes]
Length = 771
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 211/471 (44%), Gaps = 110/471 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G P+Q A + L RDLC + TG+GKT ++ LP+++ L R + R
Sbjct: 216 LGFKQPTPIQKAC----VPVSLLGRDLCACAATGTGKTAAFMLPVLERLIYKPRTSQVTR 271
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+A QF S+
Sbjct: 272 VLVLVPTRELGIQV------------------HSVARQLAQFTSI--------------- 298
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA + P D+L+ATPGRL+
Sbjct: 299 ------TTCLAVGGLDLKSQ----------EAALRAGP-----------DVLIATPGRLI 331
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F L H+ L++DE DR+L E ++ + +++L
Sbjct: 332 DHLHNTPNFELSHIEILILDEADRMLDEYFEEQMKEIIRL-------------------- 371
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ LA + L P+ + P
Sbjct: 372 --------CSYNRQ----------TMLFSATMTEEVKDLAAVSLKQPVRIFVNSNTDVAP 413
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I + + + ALL ++ ++FT + + HRL LL G +K+
Sbjct: 414 FLRQEFIRIRPHREGDREAVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMG---LKV 470
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D++GV V+N+ P+ +K Y+HR
Sbjct: 471 GELHGELSQNQRLENLRRFKDDQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHR 530
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
GRTARAG+ GR +L+ + E + K++++ A N S +P ++ R
Sbjct: 531 VGRTARAGRSGRSVSLVGESERRILKEVVKSAKN-SVKARVLPPDVVLKFR 580
>gi|366987443|ref|XP_003673488.1| hypothetical protein NCAS_0A05470 [Naumovozyma castellii CBS 4309]
gi|342299351|emb|CCC67105.1| hypothetical protein NCAS_0A05470 [Naumovozyma castellii CBS 4309]
Length = 649
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 218/475 (45%), Gaps = 122/475 (25%)
Query: 7 FPVQ---------VAVWQETIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
FP+Q V + + I F R D+ +N+ TGSGKTL+Y++PIVQTLS R+V
Sbjct: 205 FPIQTILLDTLLPVLNFSQRITKKNFTRRVGDILVNASTGSGKTLAYSIPIVQTLSKRSV 264
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRAL+++PT+ L + QV D
Sbjct: 265 NKLRALIIVPTKLL---------------------------------------IHQVYDT 285
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
+ ++ L + ++ +SS+ +E +L Q L+ D+L+ TP
Sbjct: 286 LSKLSQGTSLIISISKLESSLKEEHQKL------------------QNLEP--DVLIITP 325
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH+N +L++L LV+DE DRLL +++Q W ++ ++D ++ +
Sbjct: 326 GRLVDHLNMG-SISLKNLKMLVLDEADRLLNQSFQNWCFELMNRLKTDKLDQ-------M 377
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET 293
P ++KMV SATLT + KL L+L+ P LF+
Sbjct: 378 PG-----------------------NVIKMVFSATLTTNTQKLHDLNLYSPKLFVMDSVK 414
Query: 294 RYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--- 347
Y LP L+ + + +S KPL L+ LL+ + +VF S E++ RL TLLN
Sbjct: 415 LYHLPAMLQEFNINIPTAKSLYKPLLLLRLLKEQSTARILVFAKSNEASLRLATLLNILI 474
Query: 348 --HFGEL----RIKIKEYSGLQRQSVRSKTLKAF-----REGKIQVLVSSDAMTRGMDVE 396
+ L R +I + +S K + F E ++L+++D M+RG+D+
Sbjct: 475 NKNMENLSTTKRYEITSINSNNSKSENKKLVATFAAAATDENINKILITTDLMSRGVDIT 534
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 451
V +V+NYD P + Y+HR GRTARA G + +L + F Q DND
Sbjct: 535 NVTDVINYDVPISSQQYVHRCGRTARANTKGNVYNMLVGKGERNF--WSQHIDND 587
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 196/440 (44%), Gaps = 103/440 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLP 64
F A+ +E+I L +D+ + TGSGKT ++ALPI+Q L + + + LV+ P
Sbjct: 103 FTKPTAIQKESIPIALEGKDIIGLAETGSGKTAAFALPILQALMAAPQHEQHKFGLVLAP 162
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA Q++ F A+ + +
Sbjct: 163 TRELAYQISQQ---------------------------------------FEALGSLINV 183
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ VG + + L K P I+VATPGRL+DH+ T
Sbjct: 184 RCAVLVGGMDMVPQAIALNKNPH---------------------IVVATPGRLLDHLENT 222
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+GF++ L YLV+DE DRLL + L +LQ+ LPS
Sbjct: 223 KGFSMRSLKYLVMDEADRLLDLDFGPILDKILQV---------------LPSK------- 260
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR M+ SAT++ N L + L +P+ ++ + Y+ + L
Sbjct: 261 RRT----------------MLFSATMSTKLNNLTRAALQNPVRVSISSSSYQTVKNLMQR 304
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K +YLV LL + CIVFT ++ T R+ LL G I + G
Sbjct: 305 YIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETQRIAFLLRALGRSAIPLH---GQMN 361
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS R L FR G ++LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG
Sbjct: 362 QSARLGALNKFRGGSREILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAG 421
Query: 425 QLGRCFTLLHKDEVKRFKKL 444
+ G +++ + +++ ++++
Sbjct: 422 KSGVAISVVTQYDIEIYQRI 441
>gi|405953609|gb|EKC21239.1| Putative ATP-dependent RNA helicase DDX27 [Crassostrea gigas]
Length = 740
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
M + P+Q A TI L RDLC + TGSGKT+++ LPI++ L R R
Sbjct: 186 MNFTKPTPIQTA----TIPIALLGRDLCACAVTGSGKTVAFMLPILERLMYRTQEEAATR 241
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+LA+QV H++A Q+
Sbjct: 242 VLVLVPTRELAVQV------------------HTVARQLAQY------------------ 265
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ + L+ G I + + L +P DI++ATPGRL+
Sbjct: 266 ---TNIEIVLSAGGLDIKAQEAALRMKP---------------------DIVIATPGRLI 301
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ + F+L ++ LV+DE DR+L E + + +
Sbjct: 302 DHLHNSPNFSLRNIEILVLDEADRMLDEYFAEQMNEI----------------------- 338
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL-FLTTGETRYKL 297
IR+C R M+ SAT+++ LA + L P+ T L
Sbjct: 339 -----IRQCAQTRQ----------TMLFSATMSEAVQDLASVSLKQPVKIFVNQNTDVAL 383
Query: 298 PERLESYKLICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
R E ++ + ++A L+ + CIVF + + HR+ +L G L + +
Sbjct: 384 GLRQEFIRIRPNREGDREAIIASLVSRTFRDHCIVFIQTKKQAHRMHIIL---GLLGVNV 440
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +TLK F++ + VL+++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 441 GELHGNLSQAQRLETLKRFKQADVDVLLATDLAARGLDIEGVKTVINFTMPNTIKHYVHR 500
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR TL+ + E K K++++KA P+ + +P +I R
Sbjct: 501 VGRTARAGKKGRSVTLVGEQERKLLKEVVKKA---RTPLKTRIVPQEVISKYR 550
>gi|348544540|ref|XP_003459739.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Oreochromis
niloticus]
Length = 736
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 204/452 (45%), Gaps = 109/452 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G P+Q A + GL +DLC + TG+GKT ++ LP+++ L R + R
Sbjct: 184 LGFKQPTPIQKAC----VPVGLLGKDLCACAATGTGKTAAFMLPVLERLVYKPRTSQVTR 239
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+A QF S+
Sbjct: 240 VLVLVPTRELGIQV------------------HSVARQLAQFTSI--------------- 266
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA + P DIL+ATPGRL+
Sbjct: 267 ------TTCLAVGGLDLKSQ----------EAALRAGP-----------DILIATPGRLI 299
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F L H+ L++DE DR+L E ++ + +++L
Sbjct: 300 DHLHNTPSFELTHIEILILDEADRMLDEYFEEQMKEIIRL-------------------- 339
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ LA + L P+ + P
Sbjct: 340 --------CSYNRQ----------TMLFSATMTEEVKDLAAVSLKQPVRIFVNSNTDVAP 381
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I + + + ALL ++ ++FT + + HRL LL G +K+
Sbjct: 382 FLRQEFVRIRPHREGDREAVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMG---LKV 438
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D++GV V+N+ P +K Y+HR
Sbjct: 439 GELHGELSQNQRLENLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPGTVKHYVHR 498
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
GRTARAG+ GR +L+ + E K K++++ A
Sbjct: 499 VGRTARAGRSGRSVSLVGESERKMLKEVVKSA 530
>gi|365991671|ref|XP_003672664.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
gi|343771440|emb|CCD27421.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
Length = 709
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 215/470 (45%), Gaps = 126/470 (26%)
Query: 7 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 53
FP+Q + +TI P L F R D+ +N+ TGSGKTL+Y++PI+QTLS R
Sbjct: 250 FPIQ-TILLDTILPTLNFSLKTTKKHFTRRVGDILVNASTGSGKTLAYSIPIIQTLSKRK 308
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
V LRAL+++PT+ L + QV D
Sbjct: 309 VNKLRALIIVPTKLL---------------------------------------IHQVYD 329
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ ++ GL + ++ ++S+ +E KL+ +P DIL+ T
Sbjct: 330 TLSKLSQGTGLIITMSKLENSLKEE------HIKLQTN---EP-----------DILITT 369
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+N F L++L LV+DE DRLL +++Q W +++ D +
Sbjct: 370 PGRLVDHLNM-NSFNLKNLKMLVLDEADRLLNQSFQNWCNELMKKLTIDKTPIYQ----- 423
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 292
+P S+ T + G ++KM+ SATLT + KL L L P LF+
Sbjct: 424 IPGDEISMSTDQMPG-----------NIIKMIFSATLTTNTQKLHDLKLFKPKLFVMDSV 472
Query: 293 TRYKLPERLESYKL-ICESKLKPLYLVALL--------QSLGEEKCIVFTSSVESTHRLC 343
Y LP L+ Y + I +K L L Q + + +VF S ES+ RL
Sbjct: 473 KLYHLPSTLQEYIINIPTAKSLFKPLYLLKLLLKQYEDQQMQGSRILVFVKSNESSLRLA 532
Query: 344 TLLNHFGELRIKIKEYSGL-----QRQSVRSKTLKA------------FREGKI---QVL 383
TLL +I I + S L Q S+ S KA F + + ++L
Sbjct: 533 TLL------KIMINKTSNLNESNYQINSINSNNSKADNRKLVTEFSKPFEDSSMLHAKIL 586
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
+++D M+RG+D+ + +V+NYD P + Y+HR+GRTARA G + +L
Sbjct: 587 ITTDLMSRGIDINNITDVINYDLPLSSQQYVHRSGRTARARSNGNAYNML 636
>gi|410931566|ref|XP_003979166.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like, partial
[Takifugu rubripes]
Length = 697
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 212/471 (45%), Gaps = 110/471 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G P+Q A + GL RDLC + TG+GKT ++ LP+++ L R + R
Sbjct: 201 LGFKQPTPIQKAC----VPVGLLGRDLCACAATGTGKTAAFVLPVLERLVYKPRTSQVTR 256
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV H++ QF S+
Sbjct: 257 VLVLVPTRELGIQV------------------HAVTRQLAQFTSI--------------- 283
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG G+ ++V L++ D+L+ATPGRL+
Sbjct: 284 ------TTCLAVG-------------------GLDLKSQEVA--LRAGPDVLIATPGRLI 316
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F L H+ L++DE DR+L E ++ + +
Sbjct: 317 DHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEI----------------------- 353
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT++++ LA + L P+ + P
Sbjct: 354 -----IRLCSYNRQ----------TMLFSATMSEEVKDLAAVSLKQPVRIFVNSNTDVAP 398
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I +K + + ALL ++ + FT + + HRL LL G +K+
Sbjct: 399 YLRQEFVRIRPNKEGDREAVVAALLTRTFQDHVMCFTQTRKQAHRLHILLGLMG---LKV 455
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D++GV V+N+ P+ +K Y+HR
Sbjct: 456 GELHGELSQNQRLENLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHR 515
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
GRTARAG+ GR +L+ + E K K++++ A + +P+ +I R
Sbjct: 516 VGRTARAGRSGRSVSLVGESERKILKEVVKSAKT-TVKARVLPAEVILKFR 565
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 198/433 (45%), Gaps = 105/433 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L RD+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 58 IQKEAIPVALQGRDVIGLAETGSGKTASFALPILQALLENPQR-LFALVLTPTRELAFQI 116
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 117 S---------------------------------------EQFEALGASIGVKSAVIVGG 137
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P +++ATPGRL+DH+ T+GF+L+ L
Sbjct: 138 IDMMTQALLLAKKP---------------------HVIIATPGRLVDHLENTKGFSLKSL 176
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++
Sbjct: 177 KYLVMDEADRILNMDFEEEVDKILRVI--------------------------------- 203
Query: 253 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PR + L SAT+T+ KL + L P+ + ++Y+ E+L Y L +K
Sbjct: 204 ------PRERRTYLYSATMTKKVQKLQRASLRDPVKVEVS-SKYQTVEKLMQYYLFIPAK 256
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K +YLV LL L +VF S+ +T R LL + G I + G Q+ R +
Sbjct: 257 FKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPL---HGQMGQAKRLGS 313
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T
Sbjct: 314 LTKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAIT 373
Query: 432 LLHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 374 FVTQYDVELYQRI 386
>gi|312376445|gb|EFR23526.1| hypothetical protein AND_12724 [Anopheles darlingi]
Length = 749
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 166/342 (48%), Gaps = 44/342 (12%)
Query: 161 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 220
Q +Q A DI+V T GRL++H+++T GFTL HL +LV+DE DR++ + WL + + +
Sbjct: 280 QFIQKA-DIVVTTAGRLVEHLHSTAGFTLCHLRFLVIDEADRVMNQIQNDWLYHLNKHVK 338
Query: 221 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
++ L G L D+P + K++ SATL++DP KL
Sbjct: 339 QQSDE------YLLGRTAGQLSQTE-------LFDRPQ-QPHKLLFSATLSRDPEKLQTF 384
Query: 281 DLHHPLFLT----------------TGETR-------------YKLPERLESYKLICESK 311
L HP T G T+ Y P L + +
Sbjct: 385 KLFHPKLFTAVRDPTERAIALSKSGAGSTKQNALLRRGKFIGQYTTPSELRELVCYTQFR 444
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
+KPL L AL++ G K +VFT+ ++ +HRL +L + I+E+S + R
Sbjct: 445 IKPLTLFALIRQAGYRKFLVFTNGIDGSHRLSFVLQRLFGTEMVIEEWSSSLTPATRRSV 504
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F GK+ ++ +DA+ RG D++ + VV+YD P +I TYIHR GRTARAG G T
Sbjct: 505 LHRFSLGKVNGIICTDALARGFDIDDIEIVVSYDMPRHISTYIHRIGRTARAGNRGTSIT 564
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
LL +E K+F +L++A + I SS+ E Y +
Sbjct: 565 LLIDEEKKKFNSMLKEAGKEELEAVEIQSSVEEEYAGKYSAA 606
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 1 MGISSLFPVQVAV--W--QETIGPGLF-ERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
MG LFPVQ V W + P F RD+CI+SPTGSGKTL++A+PIVQ L R
Sbjct: 166 MGYKRLFPVQEKVIPWILEAHAKPAPFWPRDVCISSPTGSGKTLAFAVPIVQLLLKRVAP 225
Query: 56 CLRALVVLPTRDLALQVNSARCKYC 80
+RALV+LP ++LA QV K C
Sbjct: 226 AVRALVILPVQELAEQVYGVFEKLC 250
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K +YL+ LL + IVFT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIVFTRTVNETQRLANLLRALGFGAIPLH---GQLSQSA 326
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 428 RCFTLLHKDEVKRFKKL 444
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 199/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPVALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ +G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSTIGVKSA 119
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDMMSQSLALAKKP---------------------HVVIATPGRLIDHLENTKGF 158
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ ++Y+ E+L+ + +
Sbjct: 199 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-SKYQTVEKLQQFYVF 239
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R+ LL + G I + G Q+
Sbjct: 240 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPL---HGQMSQNK 296
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGSLNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 357 KAITFVSQYDVELFQRI 373
>gi|354548454|emb|CCE45190.1| hypothetical protein CPAR2_702020 [Candida parapsilosis]
Length = 610
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 211/464 (45%), Gaps = 110/464 (23%)
Query: 1 MGISSLFPVQVAVWQETI--------GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
+G S F VQV+V + I P F D+ +N+ TGSGKTL+Y +PI+Q + NR
Sbjct: 188 LGFSEAFAVQVSVLKMMIPEIKANKRQPDAF-GDILVNASTGSGKTLAYCIPIIQAIHNR 246
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RA+V++PT+ L + QVK
Sbjct: 247 VVPRVRAIVLVPTKPL---------------------------------------INQVK 267
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
++ LS+ SI +E SE +K+ D++++
Sbjct: 268 TTMMQLSQGTNLSIVGLKNDISIKEE-SERLKK-------------------LVPDVIIS 307
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL++H+N +L L +LV+DE DRLL +++Q W LT E + D +
Sbjct: 308 TPGRLVEHLNLN-SISLASLRFLVIDEADRLLNQSFQNWSSV---LTSKIEEQQKHDIT- 362
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
+R + ++ K+V SATLT D KLA L+ + P + +
Sbjct: 363 ------------KRWSL----------KVQKLVFSATLTTDAGKLAILNFYKPRLIIVND 400
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRL 342
T+ + +P L + + + ++ LKPL L L S + ++FT S ES RL
Sbjct: 401 TQQLVNEMFSVPSLLSEFIISYGVAKNSLKPLILAKFLVSQDKLFNVLIFTKSNESCIRL 460
Query: 343 CTLLNHFGE-LRIKIKE---YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
LL + L I I S R S+R++ LK F K+ +L+++D + RG+D+ +
Sbjct: 461 AKLLQLIMDALSISINVGFINSTNNRTSIRARILKDFSHQKVNILIATDLIARGIDLTTI 520
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH-KDEVKRF 441
+VVNYD P + Y+HR GRTARA G + + K E K F
Sbjct: 521 TDVVNYDLPNSSREYVHRVGRTARAENPGNAYNFVFGKGEQKWF 564
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 199/435 (45%), Gaps = 105/435 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R L AL++ PTR+LA Q+
Sbjct: 49 IQRESIPLALEGKDVIGLAETGSGKTGAFALPILQDLLEHPQR-LFALILTPTRELAFQI 107
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ A+G+ + VG
Sbjct: 108 SEQ---------------------------------------FEALGSAIGIKCAVVVGG 128
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P ++VATPGRL+DH+ T+GF L +
Sbjct: 129 IDMMSQALQLAKKPH---------------------VVVATPGRLVDHLENTKGFNLRSV 167
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++
Sbjct: 168 KYLVMDEADRILNMDFEIELDKILKVI--------------------------------- 194
Query: 253 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PR + L SAT+T+ KL + L +P+ + T+Y+ E+L Y L SK
Sbjct: 195 ------PRERRTYLYSATMTKKVAKLQRASLKNPVKVEVN-TKYQTVEKLLQYYLFIPSK 247
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K +YLV +L L +VF S+ +T R+ +L + G + + G Q+ R
Sbjct: 248 YKDVYLVYILNELAGNSFMVFCSTCNNTQRVALMLRNLGLTAVPL---HGQMSQNKRLGM 304
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 305 LNKFKGKDRSILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGKSGKAIT 364
Query: 432 LLHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 365 FVTQYDVELYQRIEQ 379
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 193/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ + L L
Sbjct: 77 LGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QSLFGL 131
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ A F A+
Sbjct: 132 ILAPTRELACQISEA---------------------------------------FEALGS 152
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 153 LISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGRLLDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 192 LENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 233
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 234 ----RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVAT 273
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 274 LLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPLH--- 330
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 331 GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRT 390
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G F+++ + +++
Sbjct: 391 ARAGKSGHAFSIVTQYDIE 409
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 103 LAFQIS---------------------------------------EQFEALGSSIGVQSA 123
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 124 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 162
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 163 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 202
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 203 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 243
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L I+F S+ +T R LL + G I + G QS
Sbjct: 244 IPSKFKDTYLVYILNELAGNSFIIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 300
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 301 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 360
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 361 KAITFVTQYDVELFQRI 377
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 193/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ + L L
Sbjct: 77 LGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QSLFGL 131
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ A F A+
Sbjct: 132 ILAPTRELACQISEA---------------------------------------FEALGS 152
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 153 LISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGRLLDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 192 LENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 233
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 234 ----RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVAT 273
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 274 LLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRTLGFGSIPLH--- 330
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 331 GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRT 390
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G F+++ + +++
Sbjct: 391 ARAGKSGHAFSIVTQYDIE 409
>gi|281349896|gb|EFB25480.1| hypothetical protein PANDA_006406 [Ailuropoda melanoleuca]
Length = 383
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 18 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 74
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 75 LAFQIS---------------------------------------EQFEALGSSIGVQSA 95
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 96 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 134
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 135 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 174
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 175 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 215
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 216 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 272
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 273 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 332
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 333 KAITFVTQYDVELFQRI 349
>gi|189208975|ref|XP_001940820.1| ATP-dependent RNA helicase DBP6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976913|gb|EDU43539.1| ATP-dependent RNA helicase DBP6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 643
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 211/481 (43%), Gaps = 133/481 (27%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL---ALQVNSARCKYCCK 82
D+C+++ TGSGKTL+Y LPI++ L +R V L A+VV+P+R L ALQV C
Sbjct: 193 DICVSAKTGSGKTLAYLLPIIEQLKDRTVPVLSAIVVVPSRQLVNQALQVAEELCS---- 248
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
+ VG A+G + A E +L
Sbjct: 249 --------------------------------------GTKIKVGTALGNVAFATEQKQL 270
Query: 143 IK-RPKLEAGICYDP-------EDVLQELQSAV----DILVATPGRLMDHINATRGFTLE 190
IK RP+ YDP E L++ Q+ + GRL++HI T GF L
Sbjct: 271 IKLRPQ------YDPRRARELNEKALRQYQTGSMERRGLYEDLKGRLVEHIENTTGFLLN 324
Query: 191 HLCYLVVDETDRLLREAYQAW-----------LPTVLQLTRSDNENRFSDASTFLPSAFG 239
+ +LV+DE D+LL + +Q W P L + + R DA++ A
Sbjct: 325 AVRWLVIDEADQLLNQNFQGWANVLMDALHGETPVDLMNAQERIQKRERDANSIWSIALP 384
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR---- 294
+ RR +L K+VLSAT+ +D KL L L P L + ET
Sbjct: 385 A----RR-------------QLTKVVLSATMEKDVTKLGTLRLKRPKLVVVQDETAEVQP 427
Query: 295 -------YKLPERLESYKL-ICESKLKPLYLVALLQSLGEEKCIVFTSS----------- 335
++LP LE + + + + KPL+L+ +L + VF S
Sbjct: 428 LDYEDDVFELPSTLEEFAVHVGDGSNKPLHLLYILLNY------VFPGSQTASVSSSDSS 481
Query: 336 -------VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
+S ++ G + I K R K LK+F G I++L++SDA
Sbjct: 482 ASDSSSDSDSDSGDTSVSQQTGRVLIFTKSTENASR-----KLLKSFSSGAIKILIASDA 536
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+RG+D+ +++V+NYD P I +Y+HR GRTARAG+ G +TL K E F K + K
Sbjct: 537 ASRGLDIPDISHVINYDLPTSITSYVHRVGRTARAGKPGEAWTLFTKTEAAWFLKQVAKG 596
Query: 449 D 449
D
Sbjct: 597 D 597
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 200/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSSIGVKSA 119
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDMMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 158
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L + YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRAIKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ +KL + L P+ ++Y+ E+L+ + +
Sbjct: 199 ------------------FSATMTKKVHKLQRAALKDPVKCAVS-SKYQTVEKLQQFYVF 239
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R+ LL + G I + G Q+
Sbjct: 240 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMG---QNK 296
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGALNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 357 KAITFVSQYDVELFQRI 373
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 103 LAFQIS---------------------------------------EQFEALGSSIGVQCA 123
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 124 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 162
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 163 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 202
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 203 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 243
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 244 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 300
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 301 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 360
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 361 KAITFVTQYDVELFQRI 377
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E+I L RD+ + TGSGKT ++ALPI+Q L R ALV+ PTR+
Sbjct: 39 PTKIQV--ESIPLALQGRDIIGLAETGSGKTGAFALPILQALLETPQRFF-ALVLTPTRE 95
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 96 LAFQIS---------------------------------------EQFEALGSSIGVQTA 116
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 117 VIVGGIDMMAQSLALAKKP---------------------HVIIATPGRLIDHLENTKGF 155
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 156 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 195
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ ++Y+ E+L+ Y +
Sbjct: 196 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-SKYQTVEKLQQYYVF 236
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 237 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMNQNK 293
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ VL+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 294 RLGSLNKFKAKARSVLLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 353
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 354 KSITFVTQYDVELFQRI 370
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L + R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILNALLDTPQR-LFALVLTPTRE 102
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 103 LAFQIS---------------------------------------EQFEALGSSIGVQCA 123
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 124 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 162
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 163 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 202
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 203 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 243
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 244 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 300
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 301 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 360
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 361 KAITFVTQYDVELFQRI 377
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K +YL+ LL + I+FT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 326
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 428 RCFTLLHKDEVKRFKKL 444
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ + +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKESSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 192/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ + L L
Sbjct: 77 LGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QSLFGL 131
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ A F A+
Sbjct: 132 ILAPTRELACQISEA---------------------------------------FEALGS 152
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 153 LISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGRLLDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 192 LENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 233
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 234 ----RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVAT 273
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 274 LLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPLH--- 330
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 331 GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRT 390
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G F+++ + +++
Sbjct: 391 ARAGKSGHAFSIVTQYDIE 409
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K +YL+ LL + I+FT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 326
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 428 RCFTLLHKDEVKRFKKL 444
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|340372235|ref|XP_003384650.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Amphimedon queenslandica]
Length = 598
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 218/473 (46%), Gaps = 116/473 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--VRCLRALVVLP 64
F +V TI L +D+C + TG+GKT ++ LPI++ L R +R R L++LP
Sbjct: 165 FTSPTSVQARTIPLALMGKDICACAATGTGKTAAFMLPILERLLYRPTRMRSTRVLILLP 224
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+QV+S + +A ++ ++C L
Sbjct: 225 TRELAIQVHS---------VGKALAQNTKIDLC--------------------------L 249
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ G G+S A L+ + DI++ATPGRL+DH++ T
Sbjct: 250 AAGGLEGRSQEAS-------------------------LRKSPDIVIATPGRLVDHLHNT 284
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + LV+DE DR+L E + + + I
Sbjct: 285 PSFSLQAIEILVLDEADRMLDEHFLDQMNEI----------------------------I 316
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
R C V R ++ SAT+T + +LA+L LH+P+ + + +T L +
Sbjct: 317 RLCPVSRQ----------TLLFSATMTDEVEELARLSLHNPVRVFVDSNTDTADNLHQEF 366
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E+ + + L+S ++ C+VF + + HR +L G L IK E G
Sbjct: 367 VRIRSNKEADREAIVSALCLRSF-KDHCLVFVPTKKQAHRQRLIL---GLLGIKTSELHG 422
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R + LK F+E ++ +L+++D RG+D+E V V+NY P +K YIHR GRTA
Sbjct: 423 SLTQLQRLEALKGFKEAEVDILIATDLAARGLDIENVRTVINYSMPPTVKQYIHRVGRTA 482
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLRPVYKS 472
RAG+ G+ TL+ + K K++++ A CP + IP+ +IE YKS
Sbjct: 483 RAGKSGKSVTLVGEKGRKVLKEIVKGA---KCPPKNRVIPAEVIEK----YKS 528
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 216/479 (45%), Gaps = 130/479 (27%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G S+ P+QVA TI L +D+ N+ TGSGKT ++ +P+++ L R A
Sbjct: 203 LGFSTPTPIQVA----TIPVALLGKDVVGNAVTGSGKTAAFMIPVLERLMYRERGKNKAA 258
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
VRC+ V++PTR+L +Q CV D
Sbjct: 259 VRCV---VLVPTRELGVQ-------------------------CV--------------D 276
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
V ++ + + + L VG S+ + +EL RP DI++AT
Sbjct: 277 VAKKLSAFMDVRISLIVGGLSLKSQEAELRTRP---------------------DIVIAT 315
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + F LE L L++DE DR+L + + L ++Q
Sbjct: 316 PGRLIDHLRNSPSFGLETLDVLILDEADRMLSDGFADELKEIIQA--------------- 360
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
C P R M+ SAT+T D + L ++ L+ P+ L
Sbjct: 361 -------------C---------PTSRQT-MLFSATMTDDVDALVRMSLNRPVKL----- 392
Query: 294 RYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
+ P+R + LI E + LVAL + ++ IVF S + H++ +
Sbjct: 393 -FVDPKRSTARGLIQEFVRVRAGKEAERAALLVALCKRTFKQGVIVFFRSKKLAHQMRVV 451
Query: 346 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 405
FG L +K +E G Q R + L+ FR+G + L+++D +RG+D++G+ VVNYD
Sbjct: 452 ---FGILGMKAEELHGDLTQEQRLRALQLFRDGAVDFLMATDLASRGLDIKGIEAVVNYD 508
Query: 406 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIHSIPSSLI 463
P + Y+HR GRTARAG+ GR TL+ + + K K ++ A D D +IPS +
Sbjct: 509 MPGQLAQYLHRVGRTARAGKKGRSVTLVGEADRKILKAAIKHASDVDKVRHRTIPSDQV 567
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 165
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 246
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 165
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 246
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 199/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L + R L ALV+ PTR+
Sbjct: 42 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQR-LFALVLTPTRE 98
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSSIGVHSA 119
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLVDHLENTKGF 158
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L +LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 199 ------------------FSATMTKQVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 239
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 240 IPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQNK 296
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 357 KSITFVTQYDVELFQRI 373
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 197/435 (45%), Gaps = 105/435 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E + L RD+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 51 IQREALPVALQGRDVIGLAETGSGKTASFALPILQALLETPQR-LFALVLTPTRELAFQI 109
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 110 S---------------------------------------EQFEALGASIGVKSAVIVGG 130
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P +++ATPGRL+DH+ T+GF L+ L
Sbjct: 131 IDMMTQALTLAKKP---------------------HVIIATPGRLVDHLENTKGFNLKSL 169
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++
Sbjct: 170 KYLVMDEADRILNMDFEEEVDKILRVI--------------------------------- 196
Query: 253 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PR + L SAT+T+ KL + L P+ + ++Y+ E+L Y L +K
Sbjct: 197 ------PRERRTYLYSATMTKKVQKLQRASLRDPVKVEVS-SKYQTVEKLMQYYLFIPAK 249
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K +YLV LL L +VF S+ +T R LL + G I + G Q+ R
Sbjct: 250 FKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLHGQMG---QAKRLGA 306
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T
Sbjct: 307 LTKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAIT 366
Query: 432 LLHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 367 FVTQYDVELYQRIEQ 381
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSIALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 40 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 96
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 97 LAFQIS---------------------------------------EQFEALGSSIGVQSA 117
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 118 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 156
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 157 NLRALKYLVMDEADRILNMDFETEVDKILKVNPRDRK-------TFL------------- 196
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 197 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 237
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 238 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 294
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 295 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 354
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 355 KAITFVTQYDVELFQRI 371
>gi|45200872|ref|NP_986442.1| AGL225Cp [Ashbya gossypii ATCC 10895]
gi|74692158|sp|Q751D1.1|DBP6_ASHGO RecName: Full=ATP-dependent RNA helicase DBP6
gi|44985570|gb|AAS54266.1| AGL225Cp [Ashbya gossypii ATCC 10895]
gi|374109687|gb|AEY98592.1| FAGL225Cp [Ashbya gossypii FDAG1]
Length = 607
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 208/452 (46%), Gaps = 115/452 (25%)
Query: 7 FPVQVAVWQE---------TIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
FP+Q A+ ++ + R D+ +N+ TGSGKTL+YA+ ++ LS R V
Sbjct: 185 FPIQTALLDSVLPLMSQAYSVSKRYYTRKVGDILVNASTGSGKTLAYAMLLIHILSRRTV 244
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LRA++++PT+ L + QV D
Sbjct: 245 NKLRAVILVPTKLL---------------------------------------VHQVYDT 265
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
A+A + V ++ +S+ +E ++L + +P D+L+ TP
Sbjct: 266 VQALAKGSSVVVAVSKMDTSLKEESAKLKAQ---------EP-----------DVLIITP 305
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH+N + F+L++L +LV+DE DRLL +++Q W
Sbjct: 306 GRLVDHLN-MQTFSLKNLKFLVLDEADRLLNQSFQNWC---------------------- 342
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 294
++ + R ER FK ++KM+ SATLT + +L L LH+P G
Sbjct: 343 ------IELMTRLNAERPFKGPG--NVIKMIFSATLTTNTERLHDLQLHNPKLFLMGSQL 394
Query: 295 YKLPERLESYKL---ICESKLKPLYLVALLQSLGEE--KCIVFTSSVESTHRLCTLL--- 346
Y +P +L+ Y L +S KPL L+ LL L E + +VF S E++ RL LL
Sbjct: 395 YHMPAQLQEYNLPIPTSKSYAKPLILLRLLPLLSTESLRILVFVKSNEASIRLAALLTAM 454
Query: 347 --NHFGELRIKIKEYSGLQRQSVRSKTLKAFR---EGKIQVLVSSDAMTRGMDVEGVNNV 401
N + + + ++ K ++AF G +LVS+D M+RG+D+ G+++V
Sbjct: 455 VGNGLSAVSTTVGSINNNNSKATNRKLIEAFAAGASGHCSILVSTDLMSRGLDISGISHV 514
Query: 402 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
+NYD P + Y+HR GRTARA G LL
Sbjct: 515 INYDLPISSQQYVHRCGRTARANTSGTAVNLL 546
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|344243858|gb|EGV99961.1| putative ATP-dependent RNA helicase DDX47 [Cricetulus griseus]
Length = 586
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 178 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 234
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 235 LAFQIS---------------------------------------EQFEALGSSIGVQCA 255
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 256 VIVGGIDSMSQSIALAKKPH---------------------IVIATPGRLIDHLENTKGF 294
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 295 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 334
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 335 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 375
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 376 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 432
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 433 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 492
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 493 KAITFVTQYDVELFQRI 509
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 200/438 (45%), Gaps = 107/438 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P +V + E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 85 PTKVQI--EAIPLALQGRDVIGLAETGSGKTAAFALPILQALLEHPQR-LFALVLTPTRE 141
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q IAE F A+ +G+ V
Sbjct: 142 LAYQ---------------------IAEQ------------------FEALGACIGIKVA 162
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P ++VATPGRL+DH+ T+GF
Sbjct: 163 VIVGGVDMVTQALCLAKKPH---------------------VIVATPGRLVDHLENTKGF 201
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L L YLV+DE DR+L +++ + +LQ+
Sbjct: 202 SLRSLKYLVMDEADRILDMDFESEVNKILQVI---------------------------- 233
Query: 248 GVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
PR K L SAT+T+ KL + L P+ + ++Y+ ++L+ + +
Sbjct: 234 -----------PRERKTYLFSATMTKKVTKLQRASLQDPVKVEVS-SKYQTVDKLQQHYI 281
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K YLV +L + + CIVFTS+ ++ R LL + G + + G Q+
Sbjct: 282 FIPQKFKDCYLVYILNEMAGKSCIVFTSTCANSLRTALLLRNLGFTAVPL---HGQMSQA 338
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+
Sbjct: 339 KRLGALNKFKAKDRSILIATDVASRGLDIPHVDLVINFDIPTHSKDYIHRVGRTARAGRA 398
Query: 427 GRCFTLLHKDEVKRFKKL 444
G T + + +V+ ++++
Sbjct: 399 GISITFVTQYDVELYQRI 416
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 193/429 (44%), Gaps = 103/429 (24%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q++
Sbjct: 53 EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQIS-- 109
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
+ F A+ ++G+ + VG
Sbjct: 110 -------------------------------------EQFEALGSSIGVQSAVIVGGIDS 132
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P I++ATPGRL+DH+ T+GF L L YL
Sbjct: 133 MSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGFNLRALKYL 171
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DR+L ++ + +L++ D + TFL
Sbjct: 172 VMDEADRILNMDFETEVDKILKVIPRDRK-------TFL--------------------- 203
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
SAT+T+ KL + L +P+ ++Y+ E+L+ Y + SK K
Sbjct: 204 ----------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIFIPSKFKDT 252
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
YLV +L L ++F S+ +T R LL + G I + G QS R +L F
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSKRLGSLNKF 309
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T + +
Sbjct: 310 KAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ 369
Query: 436 DEVKRFKKL 444
+V+ F+++
Sbjct: 370 YDVELFQRI 378
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 165
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 246
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 199/437 (45%), Gaps = 107/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P ++ V E + L +DL + TGSGKT ++ALPI+Q L S ++V+ A V+ P
Sbjct: 49 PTKIQV--EAVPHALEGKDLIGLAQTGSGKTGAFALPILQALLESSQKSVQPFFACVLSP 106
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+Q IAE F A+ +GL
Sbjct: 107 TRELAIQ---------------------IAEQ------------------FEALGSGIGL 127
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
G+ VG I + L KRP I+VATPGRL+DH++ T
Sbjct: 128 RCGVLVGGVDIVQQTLILAKRPH---------------------IVVATPGRLLDHLSNT 166
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+GF+L L YLV+DE DRLL E ++ L +L + D + T+L
Sbjct: 167 KGFSLRTLKYLVLDEADRLLNEEFEKSLDEILNVIPRDRK-------TYL---------- 209
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
SAT+T+ KL + L +P+ + ++Y + L+
Sbjct: 210 ---------------------FSATMTKKVKKLQRACLRNPVKIEAA-SKYSTVDTLKQQ 247
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
SK K YLV +L + +VFT + ++T L +L + G I I +G
Sbjct: 248 YRFVPSKHKDCYLVYILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPI---NGHMS 304
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R L F+ + VL+ +D +RG+D+ V+ V+NYD P+ K YIHR GRTARAG
Sbjct: 305 QPKRLGALNKFKARECNVLICTDVASRGLDIPSVDMVINYDVPSNSKDYIHRVGRTARAG 364
Query: 425 QLGRCFTLLHKDEVKRF 441
+ G +L+++ E++ +
Sbjct: 365 RSGVAISLVNQYELEWY 381
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 193/435 (44%), Gaps = 95/435 (21%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++A+PI+Q L R ALV+ PTR+LA Q+
Sbjct: 45 IQREAIPAALAGKDIVGLAQTGSGKTAAFAIPILQFLLEDP-RPYFALVLSPTRELAFQI 103
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ V VG
Sbjct: 104 S---------------------------------------EQFLALGSEIGVRVATLVGG 124
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP ++V TPGR++DH+ AT+GFTL+H+
Sbjct: 125 MDMVGQAVTLAKRPH---------------------VVVGTPGRVVDHLTATKGFTLKHV 163
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
LV+DE DRLL ++ L +L + RSD + S TF +
Sbjct: 164 RILVLDEADRLLNMDFEEELDQILAAVPRSDADP--SKGETFARKTY------------- 208
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-ETRYKLPERLESYKLICES 310
+ SAT+T KL + L + +Y E L + L
Sbjct: 209 -------------LFSATMTSQVAKLQRASLRSKETVRIEVSAKYSTVETLVQHYLFIPE 255
Query: 311 KLKPLYLVALLQSL-GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRS 369
K K YL L + L CIVFT + S RL +L + G + I G Q R
Sbjct: 256 KYKDCYLTYLFEELVARHSCIVFTDTQSSAQRLALMLRNLGYGAVCIH---GGMSQPNRL 312
Query: 370 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 429
L F+ G+ +LV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ GR
Sbjct: 313 GALNQFKSGEKHILVATDVASRGLDIPLVDFVINYDIPPHGKDYIHRVGRTARAGRTGRA 372
Query: 430 FTLLHKDEVKRFKKL 444
+L+ + +V+ F+K+
Sbjct: 373 ISLVSQYDVELFQKV 387
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 98
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSSIGVQSA 119
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 158
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 199 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 239
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 240 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 296
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 357 KAITFVTQYDVELFQRI 373
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 53 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 109
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 110 LAFQIS---------------------------------------EQFEALGSSIGVQSA 130
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 131 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 169
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 170 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 209
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 210 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 250
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 251 IPSKFKDTYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQTK 307
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 308 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 367
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 368 KSITFVTQYDVELFQRI 384
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 199/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L + R L ALV+ PTR+
Sbjct: 48 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQR-LFALVLTPTRE 104
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 105 LAFQIS---------------------------------------EQFEALGSSIGVHSA 125
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 126 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLVDHLENTKGF 164
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L +LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 165 NLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 204
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 205 ------------------FSATMTKQVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 245
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 302
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 362
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 363 KSITFVTQYDVELFQRI 379
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVHCA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 139 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 195
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 196 LAFQIS---------------------------------------EQFEALGSSIGVQSA 216
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 217 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 255
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 256 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 295
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 296 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 336
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 337 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQSK 393
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 394 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 453
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 454 KAITFVTQYDVELFQRI 470
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 209/468 (44%), Gaps = 108/468 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRAL 60
G +S P+Q A TI L +D+ + TGSGKT ++ +PI++ L R+ R L
Sbjct: 205 GFNSPTPIQAA----TIPVALLGKDVVGGAVTGSGKTAAFIIPILERLLYRSRDAHTRVL 260
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V++PTR+LA+Q C H++AE F DV A
Sbjct: 261 VLVPTRELAVQ---------C---------HAVAEKLGTF-----------TDVRCA--- 288
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
L VG S+ + + L RP D++VATPGRL+DH
Sbjct: 289 -------LIVGGLSLKAQEATLRTRP---------------------DLVVATPGRLIDH 320
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ +R F L+ L LV+DE DR+L + + L ++Q S
Sbjct: 321 LRNSRSFALDALDVLVLDEADRMLSDGFADELKEIVQ----------------------S 358
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
T R+ M+ SAT+T D L +L L HP+ L ++
Sbjct: 359 CPTGRQT----------------MLFSATMTDDVETLIRLSLRHPVRLFVDPSKQTARGL 402
Query: 301 LESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
++ + + K +P LVAL Q + I+F S + H+ + FG +K E
Sbjct: 403 VQEFVRVRAGKEAERPALLVALCQRTARKGVIIFFRSKKLAHQFRVV---FGLCGLKALE 459
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G Q R L FR G+ L+++D +RG+D+ G+ V+NYD P I+ Y+HR G
Sbjct: 460 LHGNLTQEQRLNALTKFRSGEADYLLATDLASRGLDIRGIETVINYDMPGQIEQYVHRVG 519
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
RTARAG+ GR TL+ + + K K +++++ D +PS ++ S+
Sbjct: 520 RTARAGKKGRSITLVGEADRKMLKAAIKRSEADKIRHRVVPSEVVASV 567
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 64 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 120
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 121 LAFQIS---------------------------------------EQFEALGSSIGVQSA 141
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 142 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 180
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 181 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKT---------------------- 218
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
++ SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 219 ----------------LLFSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 261
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 262 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 318
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 319 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 378
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 379 KAITFVTQYDVELFQRI 395
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 197/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I L +D+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 51 IQKESIPLALQGKDVIGLAETGSGKTGSFALPILQALLETPQR-LFALVLTPTRELAFQI 109
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ + VG
Sbjct: 110 S---------------------------------------EQFEALGAGIGVKCAVVVGG 130
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P +++ATPGRL+DH+ T+GF+L+ L
Sbjct: 131 IDMMTQALTLAKKPH---------------------VVIATPGRLVDHLENTKGFSLKAL 169
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ + T+L
Sbjct: 170 KYLVMDEADRILNMDFEEEVDKILRVIPRERH-------TYL------------------ 204
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + ++Y+ E+L Y L +K
Sbjct: 205 -------------YSATMTKKVQKLQRASLKDPVKVEVS-SKYQTVEKLMQYYLFIPAKF 250
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV LL L +VF S+ +T R LL + G I + G Q+ R L
Sbjct: 251 KDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPL---HGQMGQAKRLGAL 307
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T
Sbjct: 308 NKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAITF 367
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 368 VTQYDVELYQRI 379
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMNQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 200/456 (43%), Gaps = 107/456 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + L
Sbjct: 67 LGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GL 121
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q++ A F A+
Sbjct: 122 VLAPTRELAVQISEA---------------------------------------FEALGS 142
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 143 LISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGRLLDH 181
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 182 LENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE--- 223
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 224 ----RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVST 263
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 264 LLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLH--- 320
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 321 GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRT 380
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
ARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 381 ARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L + R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALDGRDIIGLAETGSGKTGAFALPILNALLDTPQRFF-ALVLTPTRE 104
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 105 LAFQIS---------------------------------------EQFEALGSSIGVECA 125
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 126 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 164
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L+L D + TFL
Sbjct: 165 NLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-------TFL------------- 204
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 205 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 245
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 302
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 362
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ ++++
Sbjct: 363 KSITFVTQYDVELYQRI 379
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 199/456 (43%), Gaps = 107/456 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + L
Sbjct: 67 LGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GL 121
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q+ A F A+
Sbjct: 122 VLAPTRELAVQITEA---------------------------------------FEALGS 142
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 143 LISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGRLLDH 181
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 182 LENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE--- 223
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 224 ----RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVST 263
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 264 LLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLH--- 320
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 321 GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRT 380
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
ARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 381 ARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 199/456 (43%), Gaps = 107/456 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + L
Sbjct: 67 LGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GL 121
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q+ A F A+
Sbjct: 122 VLAPTRELAVQITEA---------------------------------------FEALGS 142
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 143 LISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGRLLDH 181
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 182 LENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE--- 223
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 224 ----RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVST 263
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 264 LLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLH--- 320
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 321 GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRT 380
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
ARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 381 ARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 199/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I L D+ + TGSGKT S+ALP++QTL + R + LV+ PTR+LA Q+
Sbjct: 53 IQKESIPVALQGSDVIGLAETGSGKTGSFALPVLQTLLDNPQR-MYCLVLTPTRELAFQI 111
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 112 S---------------------------------------EQFEALGASIGVKCAVIVGG 132
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 133 MDMMTQSMVLAKKP---------------------HIIIATPGRLVDHLENTKGFNLRAL 171
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ + + T+L
Sbjct: 172 KYLVMDEADRILNMDFEQEVNKILKVIPKERK-------TYL------------------ 206
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + T+Y+ ++L+ +K
Sbjct: 207 -------------YSATMTSKVAKLQRACLKNPVKVEVS-TKYQTVDKLQQSYCFIPAKF 252
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L IVF S+ +T R+ +L + G I + G Q+ R L
Sbjct: 253 KDVYLVYILNELAGNSFIVFCSTCANTQRVALMLRNLGMTAIPL---HGQMNQTKRLGAL 309
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ VN VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 310 NKFKSKSRSILIATDVASRGLDIPHVNVVVNFDIPTHSKDYIHRVGRTARAGKSGKAITL 369
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 370 VTQYDVELYQRIEQ 383
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 198/443 (44%), Gaps = 107/443 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E+I L +RDL + TGSGKT ++ALPI+Q+L ++ + L
Sbjct: 89 LGYKAPTPIQA----ESIPLALQDRDLIALAETGSGKTAAFALPILQSLLDKP-QPFFGL 143
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F A+
Sbjct: 144 VLAPTRELAYQISQS---------------------------------------FEALGS 164
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ + VG + + L K+P I+VA+PGRL+DH
Sbjct: 165 KIGVRCAVIVGGMDMVPQAIALGKKPH---------------------IIVASPGRLLDH 203
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + A + +L++ E R T+L
Sbjct: 204 LENTKGFSLRALKYLVMDEADRLLDLDFGAIIDKILKVI--PRERR-----TYL------ 250
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT++ L + L PL ++ T+Y+
Sbjct: 251 -------------------------FSATMSSKVESLQRASLKDPLRVSV-STKYQTVST 284
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L LI K +YLV L+ + I+FT +V T RL LL G I +
Sbjct: 285 LIQNCLIVPLVHKDVYLVYLMNEFAGQSAIIFTRTVNETQRLAILLRSLGFGAIPLH--- 341
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR GRT
Sbjct: 342 GQLSQTARLGALNKFRAGTRKILVATDVAARGLDIPSVDIVLNYDLPPESKTYIHRVGRT 401
Query: 421 ARAGQLGRCFTLLHKDEVKRFKK 443
ARAG+ G F+++ + +V+ F +
Sbjct: 402 ARAGKSGHAFSIVTQYDVEIFTR 424
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 196/432 (45%), Gaps = 105/432 (24%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q++
Sbjct: 47 EAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQIS-- 103
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
+ F A+ ++G+ + VG +
Sbjct: 104 -------------------------------------EQFEALGSSIGVKCAVIVGGMDM 126
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P IL+ATPGRL+DH+ T+GF+L L +L
Sbjct: 127 MSQALILAKKP---------------------HILIATPGRLVDHLENTKGFSLRSLKFL 165
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DR+L ++ + +L++
Sbjct: 166 VMDEADRILNMDFEVEVDKILRVI------------------------------------ 189
Query: 256 KPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 314
PR K +L SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K
Sbjct: 190 ---PRERKTLLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKFKD 245
Query: 315 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
+YLV +L L ++F ++ +T R LL + G + + G Q+ R L
Sbjct: 246 VYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTK 302
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T +
Sbjct: 303 FKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVT 362
Query: 435 KDEVKRFKKLLQ 446
+ +V+ ++++ Q
Sbjct: 363 QYDVELYQRIEQ 374
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 196/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L RD+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 48 IQKEAIPLTLQGRDVIGLAETGSGKTGAFALPILQALLQNPQRYF-ALILTPTRELAFQI 106
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 107 SEQ---------------------------------------FQALGSKIGVKTAVIVGG 127
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P +++ATPGRL+DH+ T+GF L+ L
Sbjct: 128 MDMMSQALLLAKKPH---------------------VIIATPGRLVDHLENTKGFNLKAL 166
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 167 KFLVMDEADRILNMDFEVEVDKILKV---------------IPRE-------RRT----- 199
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+TQ KL + LH P+ + ++Y+ ++L+ Y L K
Sbjct: 200 -----------LLFSATMTQKVQKLQRASLHDPVKVEVS-SKYQTVDKLQQYYLFIPVKF 247
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV+++ + ++F + +T R LL G I + G Q+ R L
Sbjct: 248 KDVYLVSIINEMAGNTFMIFCGTCHNTLRTALLLRQLGFTAIPL---HGQMSQNKRLGAL 304
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 305 TKFRAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 364
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 365 VTQYDVELYQRIEQ 378
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 198/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ ++G+ + VG
Sbjct: 103 SEQ---------------------------------------FEALGSSIGVKCAVIVGG 123
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P IL+ATPGRL+DH+ T+GF L L
Sbjct: 124 MDMMSQALILAKKPH---------------------ILIATPGRLIDHLENTKGFNLRSL 162
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 163 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 195
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 196 -----------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKF 243
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F ++ +T R LL + G + + G Q+ R L
Sbjct: 244 KDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAAL 300
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 301 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 360
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 361 VTQYDVELYQRIEQ 374
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 49 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRE 105
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVHTT 126
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDAMSQSLALAKKPH---------------------VIIATPGRLVDHLENTKGF 165
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 246
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 247 IPSKFKDSYLVHILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 303
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGALNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 364 KSITFVTQYDVELFQRI 380
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E + L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAVPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 196/432 (45%), Gaps = 105/432 (24%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q++
Sbjct: 47 EAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQIS-- 103
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
+ F A+ ++G+ + VG +
Sbjct: 104 -------------------------------------EQFEALGSSIGVKCAVIVGGMDM 126
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P IL+ATPGRL+DH+ T+GF+L L +L
Sbjct: 127 MSQALILAKKP---------------------HILIATPGRLVDHLENTKGFSLRSLKFL 165
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DR+L ++ + +L++
Sbjct: 166 VMDEADRILNMDFEVEVDKILRVI------------------------------------ 189
Query: 256 KPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 314
PR K +L SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K
Sbjct: 190 ---PRERKTLLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKFKD 245
Query: 315 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
+YLV +L L ++F ++ +T R LL + G + + G Q+ R L
Sbjct: 246 VYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTK 302
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T +
Sbjct: 303 FKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVT 362
Query: 435 KDEVKRFKKLLQ 446
+ +V+ ++++ Q
Sbjct: 363 QYDVELYQRIEQ 374
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 191/432 (44%), Gaps = 102/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E+I L RDL + TGSGKT ++ALPI+Q L + LV+ PTR+LA+Q+
Sbjct: 75 IQAESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GLVLAPTRELAVQI 133
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ A F A+ + + + VG
Sbjct: 134 SEA---------------------------------------FEALGSLISVRCAVIVGG 154
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL+DH+ T+GF+L +L
Sbjct: 155 MDMISQSISLGKKPH---------------------IIVATPGRLLDHLENTKGFSLRNL 193
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L++ LP RR
Sbjct: 194 KYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE-------RRT----- 226
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SATL+ L + L +PL ++ +Y+ L + K
Sbjct: 227 -----------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKY 275
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L + I+FT +V T RL LL G I + G QS R L
Sbjct: 276 KDVYLVHILNEFPGQSTIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSARLGAL 332
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRTARAG+ GR ++
Sbjct: 333 GKFRSGSRNILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGRSGRAISI 392
Query: 433 LHKDEVKRFKKL 444
+ + EV+ ++++
Sbjct: 393 VTQYEVEIWQRI 404
>gi|308806291|ref|XP_003080457.1| DEAD (ISS) [Ostreococcus tauri]
gi|116058917|emb|CAL54624.1| DEAD (ISS) [Ostreococcus tauri]
Length = 419
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 205/444 (46%), Gaps = 78/444 (17%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-AVRCLRA 59
+ ++ LFPVQ +V G FERDLC+++PTGSGKTL+Y LP++ LS R +
Sbjct: 16 LQLTQLFPVQRSVLSRAYA-GRFERDLCVSAPTGSGKTLAYMLPLIHILSKRTSTEKTLG 74
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
L+VLP+ DLA QV S +C K +CV+ V V +
Sbjct: 75 LIVLPSSDLATQVCSVAGHFCAK-----------VGVCVR-----------VTGVRGTLP 112
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L V + + K + + P+ ILV TPG L+
Sbjct: 113 NCDSLRVSRRAPKRRFIRRMQATASHSKSQRSVPSTPQ-----------ILVTTPGGLVA 161
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H A +E + +LV+DE D++L++++Q +L T+ S + R S F+
Sbjct: 162 HRAA-----IETIEFLVIDEADKILQQSHQNFLATL----NSGLQRRREVDSVFV----- 207
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-YK-- 296
++ RL ++ SATL + DLH + R YK
Sbjct: 208 --------------GERHSNRLQILLCSATLKKT-------DLHMIRIFAPDQVRIYKSQ 246
Query: 297 ---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
LP + + + E+ K L+++L++ K ++ +S L L+ G
Sbjct: 247 VADLPSCISEFVVFSEAGDKFAALLSILKACSSSKMVILCASATRARHLYDQLHQIGSF- 305
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
EYS + Q R+++L AF++ + +LV++DA TRG+D+EGV+ VV++D+ + +TY
Sbjct: 306 -TCFEYSSMASQQHRAQSLSAFQKCRRGILVATDAATRGLDIEGVSIVVSFDQAEHFQTY 364
Query: 414 IHRAGRTARAGQLGRCFTLLHKDE 437
+HRAGRT RAG G C T E
Sbjct: 365 LHRAGRTGRAGNRGICVTTCSTGE 388
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQTA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KSITFVTQYDVELFQRI 378
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 192/428 (44%), Gaps = 103/428 (24%)
Query: 17 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 76
+I L RD+ + TGSGKT ++ALPI+QTL + L A V+ PTR+LA Q++
Sbjct: 41 SIPVALTGRDIIGLAQTGSGKTAAFALPILQTLFANP-QHLYACVIAPTRELAFQIS--- 96
Query: 77 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 136
+ F A+ +G+ + VG +
Sbjct: 97 ------------------------------------EQFEALGSVIGVRCAVIVGGMDMM 120
Query: 137 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 196
+ L K+P +++ TPGRL+DH+ T+GF L+HL YLV
Sbjct: 121 SQSIALSKKPH---------------------VIICTPGRLVDHLENTKGFNLKHLKYLV 159
Query: 197 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 256
+DE DRLL + A + VL++ + +T+L
Sbjct: 160 MDEADRLLDLDFGAEIEKVLKVIPRER-------NTYL---------------------- 190
Query: 257 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 316
SAT+T KL + L +P+ + T+Y + L Y K K Y
Sbjct: 191 ---------FSATMTSKVEKLQRASLVNPVKVEVA-TKYSTVDTLLQYYTFFPYKQKECY 240
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 376
L LL L + CIVFT + ST +L +L + G + + G Q R L F+
Sbjct: 241 LTYLLNELSGQTCIVFTLTCASTQKLALMLRNLGFEAVCL---HGQLTQPKRLGALAKFK 297
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
G +L+++D +RG+D+ GV+ V+NYD P K YIHR GRTARAG+ G+ TL+ +
Sbjct: 298 SGGRNILIATDVASRGLDIPGVDVVINYDVPQSSKDYIHRVGRTARAGRSGKSITLVTQY 357
Query: 437 EVKRFKKL 444
+V+ ++++
Sbjct: 358 DVEWYQRI 365
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 199/456 (43%), Gaps = 107/456 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + L
Sbjct: 67 LGYKNPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GL 121
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q+ A F A+
Sbjct: 122 VLAPTRELAVQITEA---------------------------------------FEALGS 142
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 143 LISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGRLLDH 181
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 182 LENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE--- 223
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 224 ----RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVST 263
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 264 LLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLH--- 320
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 321 GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRT 380
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
ARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 381 ARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYVF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 189/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G S P+Q QE+I P L RDL + TGSGKT ++ALPI+Q L ++ + L L
Sbjct: 77 LGYKSPTPIQ----QESIPPALAGRDLIGLAETGSGKTAAFALPILQALLDKP-QPLFGL 131
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F +
Sbjct: 132 VLAPTRELAYQISKS---------------------------------------FEGLGI 152
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 153 LISVRCAVIVGGMDMVTQSIALGKKPH---------------------IIVATPGRLLDH 191
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 192 LENTKGFSLRALKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 233
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL + +Y+
Sbjct: 234 ----RRT----------------YLFSATMSSKVESLQRASLRDPLRVQISTNKYQTVST 273
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K YL+ LL + IVFT +V T RL LL G I +
Sbjct: 274 LLQSYLFIPHPHKDTYLIYLLNDFAGQSAIVFTRTVNETQRLAILLRTLGFGAIPL---H 330
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR GRT
Sbjct: 331 GQLSQSARLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDLPPDSKTYIHRVGRT 390
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G +++ + +V+
Sbjct: 391 ARAGKSGHAISIVTQYDVE 409
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 191/433 (44%), Gaps = 107/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L + A L
Sbjct: 107 MKFTKPTPIQA----EAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWD-AQTPYFGL 161
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ K+ F A+
Sbjct: 162 VLAPTRELAYQI---------------------------------------KETFDALGS 182
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++GL VG + D+ +L++RP ILVATPGR+MDH
Sbjct: 183 SMGLRTVCIVGGMDMMDQARDLMRRPH---------------------ILVATPGRIMDH 221
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L++L YLV+DE DRLL + L +L++ + +T+L
Sbjct: 222 LEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPTQR-------TTYL------ 268
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T KL + LH+P+ + T+Y+ +
Sbjct: 269 -------------------------FSATMTSKVEKLQRASLHNPVKVAVS-TKYQTADN 302
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L ++ K YL+ LL + IVFT + + R L G + +
Sbjct: 303 LVQSMMLVSDGYKNTYLIHLLNEFVGKSIIVFTRTCAHSQRTSLLARILGFSAVPL---H 359
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R +L F+ GK +LV++D RG+D+ V+ V+NYD P K YIHR GRT
Sbjct: 360 GQLSQSQRLGSLNKFKSGKSNILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 419
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G+ +L+
Sbjct: 420 ARAGKSGKSISLV 432
>gi|367006945|ref|XP_003688203.1| hypothetical protein TPHA_0M01940 [Tetrapisispora phaffii CBS 4417]
gi|357526510|emb|CCE65769.1| hypothetical protein TPHA_0M01940 [Tetrapisispora phaffii CBS 4417]
Length = 668
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 199/421 (47%), Gaps = 103/421 (24%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PI+Q L R V LRA++++PT+ L QV
Sbjct: 253 DILVNASTGSGKTLAYSIPILQALIKRNVNKLRAIIIVPTKLLINQV------------- 299
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
F++L ++A L + + +SS+ +E +L
Sbjct: 300 --------------FNTL------------NSLASGSSLIISTSRLESSLNEEHQKL--- 330
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
L + DI+V TPGRL+DH+ ++++L +LV+DE DRLL
Sbjct: 331 -----------------LANEPDIVVVTPGRLVDHLQMG-SISVKNLKFLVLDEADRLLN 372
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W +L R + S +P ++KMV
Sbjct: 373 QSFQNWCNELLSKIR-------TQKSDIMPG-----------------------NIIKMV 402
Query: 266 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALL 321
SATLT + KL L +HP LF+ Y +P++L+ + +S KPL+L+ LL
Sbjct: 403 FSATLTTNTEKLHSLQFYHPKLFVVDSVKLYNIPKKLQEFNFAIPTAKSIYKPLFLLRLL 462
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI----KIKEYSGLQRQSVRSKTLKAFRE 377
L K +VF S +++ RL +LL+ E + I+ + + K + F +
Sbjct: 463 DQLSNAKVLVFVKSNQNSLRLTSLLSKLIEQNLGKKHTIESVNSNNSRGTNRKIVNDFSD 522
Query: 378 GKIQ-----VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
+++ VL+++D M+RG+D+ + +V+NYD P + Y+HR GRTARAG G + L
Sbjct: 523 DRLKKDVCTVLITTDIMSRGIDINNITDVINYDLPISSQQYVHRVGRTARAGTEGTTYNL 582
Query: 433 L 433
L
Sbjct: 583 L 583
>gi|426392064|ref|XP_004062380.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Gorilla
gorilla gorilla]
Length = 575
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 15 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 70
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 71 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 94
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 95 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 130
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 131 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 167
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 168 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 212
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 213 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 269
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 270 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 329
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 330 VGRTARAGKAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 379
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 201/456 (44%), Gaps = 107/456 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + + L
Sbjct: 67 LGYKAPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKP-QPYFGL 121
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q++ + F A+
Sbjct: 122 VLAPTRELAVQISES---------------------------------------FEALGS 142
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 143 LISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGRLLDH 181
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 182 LENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE--- 223
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 224 ----RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVST 263
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 264 LLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLH--- 320
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRT
Sbjct: 321 GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRT 380
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
ARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 381 ARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 200/437 (45%), Gaps = 107/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P ++ + E+I L +DL + TGSGKT ++ALPI+Q+L S ++V+ A V+ P
Sbjct: 32 PTKIQI--ESIPHALEGKDLIGLAQTGSGKTGAFALPILQSLLEASEKSVQAFFACVLSP 89
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+Q IAE F A+ +G+
Sbjct: 90 TRELAIQ---------------------IAEQ------------------FEALGSDIGV 110
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ VG + + L KRP I+VATPGRL+DH++ T
Sbjct: 111 KCAVLVGGVDMVQQSIALGKRP---------------------HIVVATPGRLVDHLSNT 149
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+GF+L L YLV+DE DRLL E ++ L +L++ + TFL
Sbjct: 150 KGFSLRTLKYLVLDEADRLLNEDFEKSLDEILKVIPRERR-------TFL---------- 192
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
SAT+T+ KL + L +P+ + ++Y + L+
Sbjct: 193 ---------------------FSATMTKKVKKLQRACLRNPVKIEAA-SKYSTVDTLKQE 230
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+K K YLV +L +VFT + ++T L +L + G I I +G
Sbjct: 231 YRFIPAKYKDCYLVYILTEKSGSTSMVFTRTCDATTFLALVLRNLGLRAIPI---NGHMT 287
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS R L F+ G+ +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTARAG
Sbjct: 288 QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAG 347
Query: 425 QLGRCFTLLHKDEVKRF 441
+ G +L+++ EV+ F
Sbjct: 348 RSGVAISLVNQYEVEWF 364
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E + L +D+ + TGSGKT ++ALPI+Q+L R L LV+ PTR+
Sbjct: 61 PTKIQI--EAVPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR-LHTLVLTPTRE 117
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 118 LAFQIS---------------------------------------EQFEALGSSIGVKCA 138
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 139 VIVGGIDMMSQSLVLAKKPH---------------------IVIATPGRLIDHLENTKGF 177
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
TL L +LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 178 TLRALKFLVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL------------- 217
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ T+Y ++L+ Y +
Sbjct: 218 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-TKYSTVDKLQQYYIF 258
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV++L L I+F S+ + R+ LL + G I + G Q+
Sbjct: 259 IPSKYKDCYLVSILNDLAGNSFIIFCSTCNNAQRVALLLRNLGITAISL---HGQMSQNK 315
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ VL+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G
Sbjct: 316 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSG 375
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 376 KSITFVTQYDVELFQRI 392
>gi|297707298|ref|XP_002830447.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Pongo abelii]
Length = 765
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|189342956|gb|ACD91989.1| DEAD box polypeptide 27 [Homo sapiens]
gi|313883628|gb|ADR83300.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 765
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|32425487|gb|AAH09304.2| DDX27 protein, partial [Homo sapiens]
Length = 769
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 209 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 264
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 265 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 288
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 289 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 324
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 325 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 361
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 362 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 406
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 407 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 463
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 464 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 523
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 524 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 573
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALEGRDIIGLAETGSGKTGAFALPILNALLETPQRFF-ALVLTPTRE 104
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 105 LAFQIS---------------------------------------EQFEALGSSIGVECA 125
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 126 VIVGGIDSMSQSLALAKKP---------------------HVIIATPGRLIDHLENTKGF 164
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L+L D + TFL
Sbjct: 165 NLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-------TFL------------- 204
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 205 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 245
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 302
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 362
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ ++++
Sbjct: 363 KSITFVTQYDVELYQRI 379
>gi|448113511|ref|XP_004202369.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
gi|359465358|emb|CCE89063.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
Length = 623
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 215/497 (43%), Gaps = 110/497 (22%)
Query: 1 MGISSLFPVQVAVWQ--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR 52
MG F VQ V + + P + DL +N+ TGSGKT++Y++PI++ L R
Sbjct: 195 MGYEEAFSVQNTVLEILLQDIEENKLRPDI-RGDLLVNAATGSGKTIAYSIPIIEALHKR 253
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
V +RA++++PT+ L QV S +
Sbjct: 254 VVPRVRAIILVPTKPLITQVKSTMSQ---------------------------------- 279
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
LS G ++ S +IS + KL+A ++P D++++
Sbjct: 280 -----------LSKGTSLRIVSFKSDISIQEEARKLKA---HEP-----------DVIIS 314
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 232
TPGRL++H+ + L L +LV+DE DRLL +++Q W V+ ++ D S+
Sbjct: 315 TPGRLVEHL-SNNTLDLSALRFLVIDEADRLLNQSFQNWCDVVI--------SKIEDNSS 365
Query: 233 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 292
F K + K++ SATLT D K+A L L P + +
Sbjct: 366 RASMIFDQWKL----------------KTQKLIFSATLTTDAGKIAGLQLQKPRLVIVND 409
Query: 293 TR------YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRL 342
+ +P L YK+ +S +KPL L LLQ+ +VF S E++ RL
Sbjct: 410 KEQMVNEMFSVPPNLLEYKIQVGAAKSSMKPLILARYLLQNNKTSNVLVFAKSNEASIRL 469
Query: 343 CTLL----NHFGELRIKIKEY--SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
LL N Y S SVR KTLK F K+ +LV++D + RG+D+
Sbjct: 470 AKLLQILMNSLTSSHQTSVAYLNSTNNSTSVRQKTLKEFSTQKVGILVATDLIARGIDIL 529
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKLLQKADNDSCPI 455
+ +VVNYD P + Y+HR GRTARA G +T K E K + K+ +
Sbjct: 530 SITDVVNYDLPISAREYVHRVGRTARANNHGNAYTFCFGKGEGKWYDKVSSSVGRSGKNV 589
Query: 456 HSIPSSLIESLRPVYKS 472
SI + + L P K+
Sbjct: 590 DSIALDVNDLLHPEDKT 606
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 197/438 (44%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ V + E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR
Sbjct: 44 WKVPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTR 102
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ + F A+ ++G+
Sbjct: 103 ELAFQIS---------------------------------------EQFEALGSSIGVQT 123
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + L K+P +++ATPGRL+DH+ T+G
Sbjct: 124 TVIVGGIDTMSQSLALAKKPH---------------------VIIATPGRLVDHLENTKG 162
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L L +LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 163 FNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------ 203
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 -------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYI 243
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 244 FIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQN 300
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+
Sbjct: 301 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRS 360
Query: 427 GRCFTLLHKDEVKRFKKL 444
G+ T + + +V+ F+++
Sbjct: 361 GKSITFVTQYDVELFQRI 378
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 187/433 (43%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L + + L L
Sbjct: 74 LGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QSLFGL 128
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ A F A+
Sbjct: 129 ILAPTRELAYQISGA---------------------------------------FEALGS 149
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 150 LISVRCAVIVGGMDMVPQAIALGKKPH---------------------IVVATPGRLLDH 188
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 189 LENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 230
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L +PL ++ ++Y+
Sbjct: 231 ----RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVST 270
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K LYLV LL + IVFT +V T RL LL G I +
Sbjct: 271 LLQSYLFIPHKYKDLYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGAIPLH--- 327
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTYIHR GRT
Sbjct: 328 GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRT 387
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G F ++
Sbjct: 388 ARAGKSGHAFNIV 400
>gi|221043088|dbj|BAH13221.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|40225538|gb|AAH11927.2| DDX27 protein, partial [Homo sapiens]
gi|48257213|gb|AAH16060.2| DDX27 protein, partial [Homo sapiens]
Length = 767
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 207 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 262
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 263 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 286
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 287 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 322
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 323 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 359
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 360 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 404
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 405 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 461
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 462 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 521
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 522 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 571
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 210/454 (46%), Gaps = 106/454 (23%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
G+SSL F + +TI L +D+ + TGSGKT ++ +PI++ L R + R
Sbjct: 245 GLSSLNFEDPTPIQSKTIPVALLGKDIVGAAVTGSGKTAAFVVPILERLVYRPKKIPTSR 304
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q C N+ IA + +C
Sbjct: 305 VLIICPTRELAMQ---------CHNVAKRIAAFTDITLC--------------------- 334
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG S+ + EL KRP DI++ATPGR +
Sbjct: 335 ---------LCVGGLSLKVQEQELRKRP---------------------DIIIATPGRFI 364
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ ++GF+++++ +V+DE DR+L + + L +++L
Sbjct: 365 DHVRNSQGFSVDNIEIMVIDEADRMLEDGFADELNEIVKL-------------------- 404
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C P R M+ SAT+T+ + L +L L+ P+ + +
Sbjct: 405 --------C---------PKSRQT-MLFSATMTEKVDDLVRLSLNRPVRIFVDAKKATAK 446
Query: 299 ERLESYKLI--CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + + +L+P LV + ++ + I+F + H++ + FG + +
Sbjct: 447 RLVQEFIRVRPQREQLRPAMLVHICKTFFHRRVIIFFRNKAFAHKMRII---FGLVGLNA 503
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + L+ FR+GK+ L+++D +RG+D++GV V+NY+ PA + Y+HR
Sbjct: 504 TEIHGSLSQEQRVRALEDFRDGKVDYLLATDVASRGLDIKGVEFVINYEAPASHEIYLHR 563
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
GRTARAG+ GR +L+ +++ K K +L+ ++N
Sbjct: 564 VGRTARAGRSGRAISLVGENDRKVIKDVLKSSEN 597
>gi|114682555|ref|XP_001166506.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 5 [Pan
troglodytes]
Length = 796
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 236 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 291
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 292 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 315
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 316 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 351
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 352 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 388
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 389 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 433
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 434 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 490
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 491 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 550
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 551 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 600
>gi|440902879|gb|ELR53614.1| Putative ATP-dependent RNA helicase DDX27, partial [Bos grunniens
mutus]
Length = 741
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 175 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 230
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 231 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 257
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 258 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 290
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 291 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 327
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 328 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 372
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 373 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 429
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 430 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 489
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 490 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 539
>gi|119596074|gb|EAW75668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_d [Homo
sapiens]
Length = 763
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 236 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 291
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 292 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 315
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 316 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 351
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 352 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 388
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 389 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 433
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 434 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 490
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 491 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 550
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 551 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 600
>gi|224593278|ref|NP_060365.7| probable ATP-dependent RNA helicase DDX27 [Homo sapiens]
gi|29427946|sp|Q96GQ7.2|DDX27_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|116497013|gb|AAI26288.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|119596072|gb|EAW75666.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_b [Homo
sapiens]
gi|120660308|gb|AAI30276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|219519028|gb|AAI44126.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|313883552|gb|ADR83262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 796
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 236 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 291
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 292 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 315
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 316 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 351
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 352 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 388
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 389 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 433
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 434 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 490
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 491 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 550
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 551 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 600
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 198/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L D+ + TGSGKT ++ALPI+QTL ++ R L ALV+ PTR+LA Q+
Sbjct: 65 IQKEAIPVALQGSDVIGLAETGSGKTGAFALPILQTLLDKPQR-LYALVLTPTRELAFQI 123
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 124 S---------------------------------------EQFEALGASIGIKCAVIVGG 144
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 145 IDMMTQSLMLAKKPH---------------------IVIATPGRLVDHLENTKGFNLRSL 183
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L K I R ER
Sbjct: 184 KYLVMDEADRILNMDFEQEVDKIL-------------------------KAIPR---ERN 215
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+T+ KL + L +P+ + ++Y+ ++L+ Y L K
Sbjct: 216 ----------TLLFSATMTKKVAKLQRASLQNPVRVEVS-SKYQTVDKLQQYYLFIPVKF 264
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L +VF S+ +T R+ +L + G I + G QS R L
Sbjct: 265 KDVYLVYILNELAGNSFMVFCSTCANTQRVALMLRNLGLTAIPLH---GQMSQSKRLGAL 321
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ V+N D P + K YIHR GRTARAG+ G T
Sbjct: 322 NKFKSKNRSILIATDVASRGLDIPHVDVVLNLDIPTHSKDYIHRVGRTARAGRSGVAITF 381
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 382 VSQYDVELYQRI 393
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TG GKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGPGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|320162646|gb|EFW39545.1| ATP-dependent RNA helicase DRS1 [Capsaspora owczarzaki ATCC 30864]
Length = 924
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 208/473 (43%), Gaps = 113/473 (23%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
ISSL F + TI P L RDL + TGSGKT ++ LP+++ L + R
Sbjct: 356 AISSLNFANATDIQAATIPPALMGRDLVACAKTGSGKTAAFLLPVLERLLYRQKTNPASR 415
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV+ PTR+LA+Q C H++ E +F
Sbjct: 416 VLVLSPTRELAVQ---------C---------HAMGEKLAKF------------------ 439
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ + L G S + +EL P D++VATPGRL+
Sbjct: 440 ---TDIRMSLICGGFSTKRQQAELRAHP---------------------DVIVATPGRLI 475
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + GF LE + L++DE DRLL ++ + +
Sbjct: 476 DHLQNSPGFDLEGIEVLIMDEADRLLEMGFKEEVDEI----------------------- 512
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTG-ETRY 295
IR+C V R M+ SAT+T + L L ++ PL F+ +T
Sbjct: 513 -----IRQCSVSR----------QTMLFSATMTDEVENLIALSMNKPLRVFINKNTDTAT 557
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E + + + L +S K IVF S + HR + FG +K
Sbjct: 558 NLTQEFVRVRPQREKEKEAIVLAVCKRSF-HTKTIVFFRSKQGAHRAKVIFGLFG---LK 613
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R ++L+AF+EG++ L+++D +RG+D+ GV VVN D P + YIH
Sbjct: 614 AAELHGDLNQLQRLESLEAFKEGRVDFLLATDLASRGLDIVGVETVVNADMPNTLTQYIH 673
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI--HSIPSSLIESL 466
R GRTARAG+ GR +L+ + E K K++++ A + P+ SIPS +IE
Sbjct: 674 RVGRTARAGRAGRSLSLVCEGERKLLKEIVKHA---TVPLSSRSIPSDVIEKF 723
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 204/455 (44%), Gaps = 115/455 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L R A
Sbjct: 192 LGFTKPTPIQAS----TIPVALLGKDIVGNAVTGSGKTAAFMIPMLERLLYREKGKRAAA 247
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL ++LPTR+LA+Q C + + H+ + C
Sbjct: 248 TRCL---ILLPTRELAVQ---------CYEVGKRLGAHTDIQFC---------------- 279
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
L VG S+ + + L +RP D+++AT
Sbjct: 280 --------------LLVGGLSLKAQEAALRQRP---------------------DVVLAT 304
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + GF L+ L LV+DE DR+L E + L +
Sbjct: 305 PGRLIDHVRNSVGFNLDSLDILVLDEADRMLSEGFADELTEI------------------ 346
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 347 ----------IKAC---------PKSRQT-MLFSATMTDSVDELIKMSLNKPVRLFVDPK 386
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
R ++ + I + +P LVAL + + K I+F S + H++ + + G
Sbjct: 387 RSTARGLIQEFVRIRKESDRPAMLVALCKQTYKHKVIIFVRSKKLAHQMRIVFSLLG--- 443
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+K E G Q R + L++FREG + L+++D +RG+D++GV VVNYD P + Y
Sbjct: 444 MKCAELHGDLSQEQRLQALQSFREGSVDYLMATDLASRGLDIKGVETVVNYDMPGQMAQY 503
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+HR GRTARAG+ G+ TL+ + + K K ++ A
Sbjct: 504 LHRVGRTARAGRKGKSVTLVGEADRKLLKAAIKHA 538
>gi|109091647|ref|XP_001099400.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Macaca
mulatta]
gi|355563050|gb|EHH19612.1| Putative ATP-dependent RNA helicase DDX27 [Macaca mulatta]
gi|355784407|gb|EHH65258.1| Putative ATP-dependent RNA helicase DDX27 [Macaca fascicularis]
Length = 763
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 203 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 258
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 259 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 282
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 283 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 318
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 319 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 355
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 356 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 400
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 401 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 457
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 458 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 517
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 518 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 567
>gi|60416850|emb|CAI59782.1| hypothetical protein [Homo sapiens]
Length = 268
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 17/230 (7%)
Query: 257 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ETRYKLPERLE 302
P L K++ SATLTQ+P KL QL LH P +TG +Y P L
Sbjct: 22 PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLT 81
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+ + C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 82 HHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSR 139
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH-RAGRTA 421
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+H R GRTA
Sbjct: 140 YGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRRVGRTA 199
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 471
RAG+ G+ FTLL K + +R ++L +A H + S L++ L P Y+
Sbjct: 200 RAGKTGQAFTLLLKVQERRLLRMLTEAGAPELQRHELSSKLLQPLVPRYE 249
>gi|50547515|ref|XP_501227.1| YALI0B22572p [Yarrowia lipolytica]
gi|74660077|sp|Q6CDN5.1|DBP6_YARLI RecName: Full=ATP-dependent RNA helicase DBP6
gi|49647093|emb|CAG83480.1| YALI0B22572p [Yarrowia lipolytica CLIB122]
Length = 607
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 208/456 (45%), Gaps = 100/456 (21%)
Query: 1 MGISSLFPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 54
+G + F VQ AV W Q+ + P + DL +++ TGSGKT +Y +PI++ L +R V
Sbjct: 206 LGYTKAFSVQKAVIPWLLAQQKLLAPDR-KPDLLVSASTGSGKTATYGIPIIEKLRDRIV 264
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
+RA+VVLPT+ L +Q V+DV
Sbjct: 265 PRIRAVVVLPTKPLVMQ---------------------------------------VRDV 285
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
++ LSV ++ ++ S +R LE DI+VA P
Sbjct: 286 LENLSKGSSLSV------VALRNDRSTKRERAVLETA----------------DIVVAAP 323
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL++ + ++ +LVVDE DRLL + Y W +VLQ +N+ R T L
Sbjct: 324 GRLVEQVKENPEL-FSYIEFLVVDEADRLLGQDYYDW-ASVLQ----NNQQRAQAGKTNL 377
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET 293
+ +R + ++ SATLT +P +A +D+H+P +F+
Sbjct: 378 TEHY-----VRN--------------MQTLIFSATLTANPEHIASMDIHNPGVFVIGSSD 418
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN----HF 349
Y +P+ L + KPL L LL + +VFT S E+ R+ ++
Sbjct: 419 SYSIPKSLTEIVTHVSAAEKPLMLCELLVQRDINRGVVFTKSSETAARVARMMEIMDADI 478
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
KI S R +++K F +GKI LV +D ++RG+D V+NV+NYD P+
Sbjct: 479 FHKDWKIAAVSAETSSVHRRRSMKQFIDGKIDFLVCTDLVSRGIDF-VVDNVINYDIPSG 537
Query: 410 IKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKKL 444
+ Y+HR GRTARAG+ G +T L E K F+++
Sbjct: 538 KREYVHRVGRTARAGREGNAYTFLTGSGEAKWFREI 573
>gi|122692565|ref|NP_001073740.1| probable ATP-dependent RNA helicase DDX27 [Bos taurus]
gi|142980808|sp|A1A4H6.1|DDX27_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|119223998|gb|AAI26498.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Bos taurus]
gi|296481114|tpg|DAA23229.1| TPA: probable ATP-dependent RNA helicase DDX27 [Bos taurus]
Length = 765
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 287
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 288 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|164660112|ref|XP_001731179.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
gi|159105079|gb|EDP43965.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
Length = 638
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 218/483 (45%), Gaps = 119/483 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC---- 56
G+++L F + TI L +D+ + TGSGKT ++ +PI++ LS R
Sbjct: 91 GLAALNFSRPTPIQARTIPIALAGKDIVAGAVTGSGKTAAFLIPIMERLSYRQRSADDAK 150
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R +V+ PTR+LA+Q C HS+A+ +F ++ F
Sbjct: 151 SRVVVLCPTRELAIQ---------C---------HSVAQALGKFMNVRFC---------- 182
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + +EL RP D+++ATPGR
Sbjct: 183 -----------LCVGGLSLKLQEAELKTRP---------------------DVIIATPGR 210
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ + F +E + LV+DE DR+L + ++ L +++L
Sbjct: 211 LIDHVRNSASFGMEDVEILVMDEADRMLEDGFEDELNEIVRL------------------ 252
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LF------- 287
C +R M+ SAT+T+D ++L +L L P LF
Sbjct: 253 ----------CPKQRQ----------TMLFSATMTEDVDQLVRLSLRTPVRLFVDPKRST 292
Query: 288 ---LTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 343
LT R + RL + + E + + LV L ++ I+F S + H+L
Sbjct: 293 ASKLTQEFVRVRAQSRLTGHARQQAEDQHRAAILVTLCMRTFRDQVIIFVRSKKLAHQLK 352
Query: 344 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 403
L FG L + E G Q R ++L FR+GK+ L+++D +RG+D+ GV V+N
Sbjct: 353 IL---FGLLGLSAAELHGDLSQEQRLQSLSLFRDGKVDFLLATDLASRGIDIRGVQTVIN 409
Query: 404 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
YD PA ++ Y+HR GRTARAG+ GR TL+ + + + K +L++ + +PS ++
Sbjct: 410 YDMPAQLEPYLHRVGRTARAGRQGRAVTLVGEPDRRLLKTVLKRTPPEQVKHRLMPSEMV 469
Query: 464 ESL 466
+ L
Sbjct: 470 QKL 472
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 197/454 (43%), Gaps = 104/454 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + E I L +D+ + TGSGKT ++A+PI+Q L + A LV+ PTR
Sbjct: 88 FTKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQALWH-AQTPYFGLVLAPTR 146
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ KD F A+ +GL
Sbjct: 147 ELAFQI---------------------------------------KDTFDALGTTMGLRS 167
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG + D+ +L+++P I+VATPGR+MDH+ T+G
Sbjct: 168 VCIVGGMDMMDQARDLMRKPH---------------------IVVATPGRIMDHLEHTKG 206
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L++L YLV+DE DRLL + L +L++ +P
Sbjct: 207 FSLKNLKYLVMDEADRLLDMDFGPALDKILKV---------------IP----------- 240
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
P+ + SAT+T KL + LH+P+ + T+Y+ + L +
Sbjct: 241 ------------PKRTTYLFSATMTNKIEKLQRASLHNPVRVAVS-TKYQTADNLVQSMM 287
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K L+ LL + IVFT +V R L G + + G Q+
Sbjct: 288 LVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPL---HGQLSQA 344
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R +L F+ GK +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG+
Sbjct: 345 QRLGSLNKFKSGKANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRS 404
Query: 427 GRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 460
G+ +L+ + +++ + + ++ A P PS
Sbjct: 405 GKSISLITQYDLEMYLR-IENALGKKLPKEDKPS 437
>gi|426241599|ref|XP_004014677.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Ovis aries]
Length = 765
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 287
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 288 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|448116165|ref|XP_004202989.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
gi|359383857|emb|CCE79773.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
Length = 615
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 207/465 (44%), Gaps = 103/465 (22%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DL +N+ TGSGKT++Y++PI++ L R V +RA++++PT+ L QV S +
Sbjct: 219 DLLVNAATGSGKTIAYSIPIIEALHERVVPRVRAIILVPTKPLITQVKSTMSQ------- 271
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
LS G ++ S+ ++S +
Sbjct: 272 --------------------------------------LSKGTSLSIVSLKSDLSVQEEA 293
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI-NATRGFTLEHLCYLVVDETDRLL 204
KL+A ++P D++++TPGRL++H+ N+T L L +LV+DE DRLL
Sbjct: 294 RKLKA---HEP-----------DVIISTPGRLVEHLSNST--LDLSALRFLVIDEADRLL 337
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+++Q W V+ ++ D S+ F K + K+
Sbjct: 338 NQSFQNWCDIVI--------SKIDDTSSRASMIFDHWKL----------------KTQKL 373
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESKLKPL 315
+ SATLT D K+A L L P + + + +P L YK+ +S +KPL
Sbjct: 374 IFSATLTTDAGKIAGLQLQKPRLVIVNDKEQMVNEMFSVPPNLLEYKIQVGAAKSSIKPL 433
Query: 316 YLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL----NHFGELRIKIKEY--SGLQRQSVR 368
L L QS ++F S E++ RL LL N Y S SVR
Sbjct: 434 ILARYLFQSGKTSNVLIFAKSNEASIRLAKLLQILMNSLSSSHQTSVAYLNSTNNSTSVR 493
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
KTLK F KI +LV++D + RG+D+ + +VVNYD P + Y+HR GRTARA G
Sbjct: 494 QKTLKDFSTQKIGILVATDLIARGIDILSITDVVNYDLPISAREYVHRVGRTARANNHGN 553
Query: 429 CFTL-LHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 472
+T K E + + K+ + SI + + L P K+
Sbjct: 554 AYTFCFGKGEGRWYDKVSSSVGRSGKNVDSIALDVNDLLHPEDKT 598
>gi|403282331|ref|XP_003932605.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Saimiri
boliviensis boliviensis]
Length = 765
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDLKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P ++ R
Sbjct: 520 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVVLKFR 569
>gi|402591870|gb|EJW85799.1| DEAD/DEAH box helicase [Wuchereria bancrofti]
Length = 527
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 202/439 (46%), Gaps = 104/439 (23%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSN-RAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
RDL I+SPTGSGKTL Y +PI+ L + CL ALVV+P ++L Q+ KY N
Sbjct: 118 RDLVISSPTGSGKTLCYVIPILNALRGCIMMDCLFALVVVPVQNLVDQIEKEFKKY---N 174
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+F + I +C D L+V
Sbjct: 175 VFNV----RIVSLCGSHD----------------------LNV----------------- 191
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR---GFTLEHLCYLVVDET 200
+R +LE+ +I++AT GRLM+HIN FT HL YLVVDE
Sbjct: 192 ERQQLESA----------------NIVIATAGRLMEHINDLDFPADFT--HLRYLVVDEA 233
Query: 201 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 260
DR+ A WL L+ + N N + + S
Sbjct: 234 DRMSHTARIEWLND-LEAVANYNHNCVTIDDLYNASF----------------------- 269
Query: 261 LVKMVLSATLTQDPNKLAQLDLHHP-LF-------LTTGETRYK---LPERLESYKLICE 309
L K++LSATL+ D L + L HP LF + T E +P L+ +IC+
Sbjct: 270 LQKILLSATLSLDVEDLHEWRLRHPCLFKAVKEDIVVTNELSLNSVIIPTSLKIECIICD 329
Query: 310 SKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 368
+K KPL ++ +K ++F +S +++RL LL + +++E S + R
Sbjct: 330 TKFKPLVTHERIEGRKSWKKILIFVNSKIASYRLAVLLKMLSIGKYQVEELSSNLFGNRR 389
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
K L FR+G +VL+SSD ++RG+DV+ ++ V+NYD+P K ++HR GRTAR G+ GR
Sbjct: 390 QKVLARFRKGTTRVLISSDVLSRGIDVKDIDVVINYDRPLNEKLFVHRVGRTARCGKKGR 449
Query: 429 CFTLLHKDEVKRFKKLLQK 447
L+ E K F+ LQK
Sbjct: 450 AIFLITAKEKKDFQATLQK 468
>gi|344279740|ref|XP_003411645.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Loxodonta africana]
Length = 822
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 262 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTR 317
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 318 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 344
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 345 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 377
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 378 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 414
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 415 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 459
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 460 FLRQEFIRIRPNREGDREAIVAALLTRTFSDHVMLFTQTKKQAHRMHILLGLMG---LQV 516
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P +K Y+HR
Sbjct: 517 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHR 576
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 577 VGRTARAGRAGRSVSLVGEEERKMLKEIVKSA---KAPVKARILPQDVILKFR 626
>gi|13384106|gb|AAK21271.1| RNA helicase-like protein [Homo sapiens]
Length = 561
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 209/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 1 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 56
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 57 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 80
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 81 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 116
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 117 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 153
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 154 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 198
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ L G +++
Sbjct: 199 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHIFLGLMG---LQV 255
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 256 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 315
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 316 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 365
>gi|186703632|emb|CAQ43244.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
Length = 628
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 196/426 (46%), Gaps = 114/426 (26%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PI++ LS R V LRALV++PT+ L
Sbjct: 236 DILVNASTGSGKTLAYSIPIIEALSKRTVNKLRALVIVPTKLL----------------- 278
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
+ QV D + +A GL + ++ ++S+ +E + I
Sbjct: 279 ----------------------IGQVFDTMSKLAQGTGLIISISKLENSLKEEHQKFIN- 315
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
Y+P DIL+ TPGRL+DH+ +++L LV+DE D LL
Sbjct: 316 --------YEP-----------DILIVTPGRLVDHLQIG-SINMKNLMMLVLDEADHLLN 355
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W ++ RS ++ +P ++KMV
Sbjct: 356 QSFQNWSAELMNNIRSQKLDQ-------MPG-----------------------NVIKMV 385
Query: 266 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALL 321
SATLT + KL L L++P LF+ Y LP++L+ Y + +S KPL+L+ LL
Sbjct: 386 FSATLTTNTEKLHGLHLYNPKLFVKDSVKLYNLPDKLQEYNINVPTAKSIYKPLFLLHLL 445
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ--SVRSKTLKAFREGK 379
L K +VF S E++ RL LL I I+ G SV S KA +
Sbjct: 446 DKLHNAKILVFVKSNEASLRLAPLLT------IMIERKMGTPHNVLSVNSNNSKAENKRL 499
Query: 380 I------------QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
+ QVL+++D M+RG+D+ + +V+NYD P + Y+HR GRTARA G
Sbjct: 500 VHQFATSNTSESNQVLITTDLMSRGIDINDITDVINYDPPISSQQYVHRCGRTARAQGHG 559
Query: 428 RCFTLL 433
LL
Sbjct: 560 NAHNLL 565
>gi|194224511|ref|XP_001501169.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Equus
caballus]
Length = 724
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 254 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 309
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 310 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI-------------TT 338
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
AVG GL V A L++A DIL+ATPGRL+
Sbjct: 339 CLAVG---GLDVKSQEAA--------------------------LRAAPDILIATPGRLI 369
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 370 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 406
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 407 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 451
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 452 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 508
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 509 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 568
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 569 VGRTARAGRAGRSVSLVGEEERKMLKEIVKTA---KAPVKARILPQDVILKFR 618
>gi|296200672|ref|XP_002747679.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Callithrix
jacchus]
Length = 764
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L + R R
Sbjct: 204 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRRGPVTR 259
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 260 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 283
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG G+ ++V L++A DIL+ATPGRL+
Sbjct: 284 ---CNITTCLAVG-------------------GLDVKSQEVA--LRAAPDILIATPGRLI 319
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 320 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 356
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 357 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 401
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 402 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 458
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 459 GELHGNLSQMQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 518
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P ++ R
Sbjct: 519 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVVLKFR 568
>gi|301754403|ref|XP_002913034.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Ailuropoda melanoleuca]
Length = 764
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 204 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 259
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF
Sbjct: 260 VLVLVPTRELGIQV------------------HSVTKQLAQF------------------ 283
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 284 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 319
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 320 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 356
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 357 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 401
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 402 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 458
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 459 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 518
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 519 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 568
>gi|281351106|gb|EFB26690.1| hypothetical protein PANDA_000812 [Ailuropoda melanoleuca]
Length = 703
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 173 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 228
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF
Sbjct: 229 VLVLVPTRELGIQV------------------HSVTKQLAQF------------------ 252
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 253 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 288
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 289 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 325
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 326 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 370
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 371 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 427
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 428 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 487
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 488 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 537
>gi|395506879|ref|XP_003757757.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Sarcophilus
harrisii]
Length = 766
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 210 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPITR 265
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF ++
Sbjct: 266 VLVLVPTRELGIQV------------------HSVTKQLAQFSTV--------------- 292
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA + P DIL+ATPGRL+
Sbjct: 293 ------TTCLAVGGLDVKSQ----------EAALRAGP-----------DILIATPGRLI 325
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + ++QL
Sbjct: 326 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIQL-------------------- 365
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T + LA + L +P+ + P
Sbjct: 366 --------CSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 407
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 408 FLRQEFIRIRPNREGDREAIVSALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 464
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 465 GELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 524
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 525 VGRTARAGRAGRSVSLVGEEERKMLKEIVKSA---KAPVKARILPQDVILKFR 574
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 198/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ QE I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ QFD A+ ++G+ + VG
Sbjct: 103 SE------------------------QFD---------------ALGSSIGVKTVVLVGG 123
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 124 MDMHAQGMILEKKPH---------------------IIIATPGRLVDHLENTKGFNLRQL 162
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 163 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 195
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 196 -----------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKF 243
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F + +T R LL + G + + G Q+ R L
Sbjct: 244 KDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPL---HGQMTQNKRIAAL 300
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 301 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 360
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 361 VTQYDVELYQRIEQ 374
>gi|170579262|ref|XP_001894751.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158598525|gb|EDP36400.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 527
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 203/438 (46%), Gaps = 104/438 (23%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
RDL I+SPTGSGKTL Y +PI+ L + + CL AL+V+P ++L Q+ KY N
Sbjct: 118 RDLVISSPTGSGKTLCYVIPILNALRACTMMDCLFALIVVPVQNLVDQIEKEFKKY---N 174
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+F +C+ +SL DV +
Sbjct: 175 VFN---------VCI-------VSLCGSHDVN---------------------------V 191
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI---NATRGFTLEHLCYLVVDET 200
+R +LE+ +I++ATPGRLM+HI + FT HL YLVVDE
Sbjct: 192 ERQQLESA----------------NIVIATPGRLMEHITDLDFPADFT--HLRYLVVDEA 233
Query: 201 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 260
DR+ A WL L+ + N N + + S
Sbjct: 234 DRMSHTARIEWLNN-LEAAANYNHNCVTIDDLYNASF----------------------- 269
Query: 261 LVKMVLSATLTQDPNKLAQLDLHHP-LF-------LTTGETRYK---LPERLESYKLICE 309
L K++LSATL+ D L + L HP LF + T E +P L+ ++C+
Sbjct: 270 LQKILLSATLSLDVEDLHEWRLRHPCLFKAVKEDVVVTNELSLNSVIIPNSLKIEYIVCD 329
Query: 310 SKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 368
+K KPL ++ +K ++F +S +++RL LL + +++E S + R
Sbjct: 330 TKFKPLVTHERIEGRKSWKKILIFVNSKLASYRLAVLLKMLSVGKYQVEELSSNLFGNRR 389
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
K L FR+G +VL+SSD ++RG+DV ++ V+NYD+P K ++HR GRTAR G+ GR
Sbjct: 390 QKVLARFRKGTTRVLISSDVLSRGIDVMDIDVVINYDRPLNEKLFVHRVGRTARCGKKGR 449
Query: 429 CFTLLHKDEVKRFKKLLQ 446
L+ E K F+ LQ
Sbjct: 450 AIFLITAKEKKDFQATLQ 467
>gi|242007312|ref|XP_002424485.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212507903|gb|EEB11747.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 669
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 210/470 (44%), Gaps = 115/470 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCL 57
M S P+Q A I L RD+C + TG+GKT +Y LPI++ L + ++
Sbjct: 173 MNFSHPTPIQCAA----IPVALLGRDICGCAATGTGKTAAYMLPILERLLYKPQGSLSIT 228
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
R LV++PTR+L +QV +A+ +F ++
Sbjct: 229 RVLVLVPTRELGVQV------------------IQVAKQLSKFTTI-------------- 256
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+GLAVG + + + L K+P DI++ATPGRL
Sbjct: 257 -------EIGLAVGGLDVKVQEAFLRKQP---------------------DIVIATPGRL 288
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ + GF+L+ + LV+DE DR+L E + + +
Sbjct: 289 IDHLKNSLGFSLDSIEILVLDEADRMLDEYFAEQMKEI---------------------- 326
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
+R+C R M+ SAT+T LA + L +P+ + +
Sbjct: 327 ------VRQCSRTRQ----------TMLFSATMTTAVEDLASVSLSNPVKIFVDSNQSVT 370
Query: 298 PERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
+ + I + + K L AL++ CI+F ++ H+L LL G L +K
Sbjct: 371 NNLRQEFIRIRKGREGDKEAVLAALVRRTFRANCIIFVATKSQAHKLRILL---GFLNMK 427
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G RQ R TLK F+ G++ +LV++D RG+D+ GV V+NYD P + YIH
Sbjct: 428 AGELHGNLRQPERLDTLKRFKNGELDILVATDVAARGLDISGVKTVINYDLPMTFEHYIH 487
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 463
R GRTARAG+ G +L + E K K++++KA+ P+ S IP ++
Sbjct: 488 RVGRTARAGRSGISVSLACESERKLVKEIVKKAER---PVKSRIIPPQIL 534
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 201/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++A+P++Q+L A R L LV+ PTR+
Sbjct: 102 PTKIQI--EAIPVALQGRDVIGLAETGSGKTGAFAVPVLQSLLACAQR-LHTLVLTPTRE 158
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q IAE QFD A+ ++G+
Sbjct: 159 LAFQ---------------------IAE---QFD---------------ALGSSIGVKTA 179
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 180 VIVGGIDMMSQALVLAKKPH---------------------VVIATPGRLIDHMENTKGF 218
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L +++ + +L++ D TFL
Sbjct: 219 NLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRR-------TFL------------- 258
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ + ++Y ++L+ + +
Sbjct: 259 ------------------FSATMTKKVQKLQRAALQDPVKCSVS-SKYATVDKLQQFYIF 299
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV++L L +VF + +T R+ LL + G I + G Q+
Sbjct: 300 IPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPL---HGQMSQNK 356
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ VL+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 357 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSG 416
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 417 KSITFVTQYDVELFQRI 433
>gi|443720455|gb|ELU10207.1| hypothetical protein CAPTEDRAFT_141736, partial [Capitella teleta]
Length = 616
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG + P+Q A TI L +D+C + TG+GKT ++ LP+++ L R R
Sbjct: 52 MGFTQPTPIQGA----TIPVALLGKDICACAATGTGKTAAFLLPVLERLLYRPRQAPVTR 107
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV+ PTR+LA+Q+ H++A QF
Sbjct: 108 VLVLTPTRELAVQI------------------HTVARQLTQF------------------ 131
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ L+ G + + EA + P DI++ATPGRL+
Sbjct: 132 ---TNIETSLSAGGMDVKAQ----------EAALRLGP-----------DIVIATPGRLI 167
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E + + V+ L
Sbjct: 168 DHLHNAPNFNLNSVEVLILDEADRMLDEYFAEQMKEVISL-------------------- 207
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-TRYKL 297
T+R+ M+ SAT+T++ LA + L+ P+ + E T+ L
Sbjct: 208 --CATVRQT----------------MLFSATMTEEVKDLAAVSLNSPVKIFVNENTQVAL 249
Query: 298 PERLESYKLICESKLKPLYLV-ALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
R E ++ + +V ALL+ ++ +VF + + HRL +L G I++
Sbjct: 250 NLRQEFIRIRPNREGDREAVVGALLKRTFHDQVMVFVQTKKQAHRLHIILGLLG---IRV 306
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R ++LK F++G + VL+++D RG+D++GV V+N+ P+ YIHR
Sbjct: 307 GELHGNLSQQQRLESLKRFKDGDVDVLLATDLAARGLDIDGVRTVINFTMPSTCAHYIHR 366
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR TL + E K K++++KA + P+ S +P ++ R
Sbjct: 367 VGRTARAGKSGRAITLAGEQERKVLKEVVKKA---TLPVKSRVVPQDVVTRFR 416
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 187/433 (43%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E I L RDL + TGSGKT ++ALPI+Q L ++ + L L
Sbjct: 74 LGYKTPTPIQT----EAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSLFGL 128
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ A F A+
Sbjct: 129 VLAPTRELAYQISEA---------------------------------------FEALGS 149
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 150 LISVRCAVIVGGMDMVPQAIALGKKPH---------------------IIVATPGRLLDH 188
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 189 LENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 230
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L +PL ++ ++Y+
Sbjct: 231 ----RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVST 270
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + I+FT +V T RL LL G I +
Sbjct: 271 LLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPLH--- 327
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTYIHR GRT
Sbjct: 328 GQLSQSYRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRT 387
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G F+ +
Sbjct: 388 ARAGKSGHAFSFV 400
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 103/431 (23%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q++
Sbjct: 52 EAIPLTLEGKDIIGLAETGSGKTAAFAIPILQALLENPQRYF-ALILTPTRELAFQISEQ 110
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
F A+ ++G+ + VG +
Sbjct: 111 ---------------------------------------FEALGSSIGVKCAVIVGGMDM 131
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P IL+ATPGRL+DH+ T+GF L L +L
Sbjct: 132 MSQALLLAKKPH---------------------ILIATPGRLVDHLENTKGFNLRSLKFL 170
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DR+L ++ + +L++ +P RR
Sbjct: 171 VMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT-------- 200
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K +
Sbjct: 201 --------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYVFIPVKFKDV 251
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
YLV +L L ++F ++ +T R LL + G + + G Q+ R L F
Sbjct: 252 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTKF 308
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T + +
Sbjct: 309 KAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQ 368
Query: 436 DEVKRFKKLLQ 446
+V+ ++++ Q
Sbjct: 369 YDVELYQRIEQ 379
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 199/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ QE I L +D+ + TGSGKT ++ALPI+Q L + R AL++ PTR+LA Q+
Sbjct: 21 IQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLEQPQRYF-ALILTPTRELAFQI 79
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ QFD A+ ++G+ + VG
Sbjct: 80 SE------------------------QFD---------------ALGSSMGVKTVVLVGG 100
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 101 MDMHAQGMILEKKPH---------------------IIIATPGRLVDHLENTKGFNLRQL 139
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 140 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 172
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 173 -----------LLFSATMTKKVQKLQRASLRNPVRVEVS-TKYQTVEKLQQYYIFIPVKF 220
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F + +T R LL + G + + G Q+ R L
Sbjct: 221 KDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAAL 277
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 278 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 337
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 338 VTQYDVELYQRIEQ 351
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L +D+ + TGSGKT ++ALPI+Q+L R L LV+ PTR+
Sbjct: 60 PTKIQI--EAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR-LHTLVLTPTRE 116
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 117 LAFQIS---------------------------------------EQFEALGSSIGVKCA 137
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 138 VIVGGIDMMSQSLVLAKKPH---------------------VVIATPGRLIDHLENTKGF 176
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L L +LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 177 SLRALKFLVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL------------- 216
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ T+Y ++L+ Y +
Sbjct: 217 ------------------FSATMTKKVQKLERAALKDPVKCAVS-TKYSTVDKLQQYYIF 257
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV++L L I+F S+ + R+ LL + G I + G Q+
Sbjct: 258 IPSKYKDCYLVSILNELAGNSFIIFCSTCNTAQRVALLLRNLGITAIPLH---GQMSQNK 314
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ VL+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G
Sbjct: 315 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSG 374
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 375 KSITFVTQYDVELFQRI 391
>gi|355683275|gb|AER97071.1| DEAD box polypeptide 27 [Mustela putorius furo]
Length = 712
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 204 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 259
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L+++PTR+L +QV HS+ + QF S+
Sbjct: 260 VLILVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 286
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 287 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 319
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 320 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 356
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 357 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 401
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 402 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 458
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 459 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 518
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 519 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 568
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 193/438 (44%), Gaps = 104/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
FP + +++I L +RD+ + TGSGKT ++ALPI+Q L ++ + L LV+ PTR
Sbjct: 79 FPT--PIQEKSIPIALQDRDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLVLAPTR 135
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ A F A+ ++ L
Sbjct: 136 ELAHQIGQA---------------------------------------FEALGSSISLRC 156
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 157 AVIVGGLDMVPQAVALGKKPH---------------------IIVATPGRLVDHLEKTKG 195
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 196 FSLRTLKYLVMDEADRLLDMDFGPAIDKLLK---------------FIPRE-------RR 233
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SATL+ L + L P+ ++ +Y+ L L
Sbjct: 234 T----------------YLFSATLSSKVESLQRASLRDPVRVSVSSNKYQTVSTLLQNLL 277
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K K YL+ L+ + IVFT +V T R+ LL G I + G QS
Sbjct: 278 VVPQKRKDTYLIYLVNEFTGKSTIVFTRTVWETQRIAILLRTLGFGAIPL---HGQLSQS 334
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+
Sbjct: 335 ARLGALNKFRSGTRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKS 394
Query: 427 GRCFTLLHKDEVKRFKKL 444
G +L+ + +++ F+++
Sbjct: 395 GIAISLVTQYDIEIFQRI 412
>gi|254580363|ref|XP_002496167.1| ZYRO0C12012p [Zygosaccharomyces rouxii]
gi|186703847|emb|CAQ43534.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
gi|238939058|emb|CAR27234.1| ZYRO0C12012p [Zygosaccharomyces rouxii]
Length = 624
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 196/426 (46%), Gaps = 114/426 (26%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PI++ LS R V LRALV++PT+ L
Sbjct: 236 DILVNASTGSGKTLAYSIPIIEALSKRTVNKLRALVIVPTKLL----------------- 278
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
+ QV D + +A GL + ++ ++S+ +E + I
Sbjct: 279 ----------------------IGQVFDTMSKLAQGTGLIISISKLENSLKEEHQKFIN- 315
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
Y+P DIL+ TPGRL+DH+ +++L LV+DE D LL
Sbjct: 316 --------YEP-----------DILIVTPGRLVDHLQIG-SINMKNLMMLVLDEADHLLN 355
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W ++ RS ++ +P ++KMV
Sbjct: 356 QSFQNWSAELMNNIRSHKLDQ-------MPG-----------------------NVIKMV 385
Query: 266 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALL 321
SATLT + KL L L++P LF+ Y LP++L+ Y + +S KPL+L+ LL
Sbjct: 386 FSATLTTNTEKLHGLHLYNPKLFVRDSVKLYNLPDKLQEYNINVPTAKSIYKPLFLLHLL 445
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ--SVRSKTLKAFREGK 379
L K +VF S E++ RL LL I I+ G SV S KA +
Sbjct: 446 DKLHNAKILVFVKSNEASLRLAPLLT------IMIERKMGTPHNVLSVNSNNSKAENKRL 499
Query: 380 I------------QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
+ QVL+++D M+RG+D+ + +V+NYD P + Y+HR GRTARA G
Sbjct: 500 VHQFATSNTSESNQVLITTDLMSRGIDINDITDVINYDPPISSQQYVHRCGRTARAQGHG 559
Query: 428 RCFTLL 433
LL
Sbjct: 560 NAHNLL 565
>gi|334312364|ref|XP_001379053.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Monodelphis
domestica]
Length = 891
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 336 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPITR 391
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF ++
Sbjct: 392 VLVLVPTRELGIQV------------------HSVTKQLAQFSTV--------------- 418
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA + P DIL+ATPGRL+
Sbjct: 419 ------TTCLAVGGLDVKSQ----------EAALRAGP-----------DILIATPGRLI 451
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + ++Q+
Sbjct: 452 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIQM-------------------- 491
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T + LA + L +P+ + P
Sbjct: 492 --------CSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 533
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 534 FLRQEFIRIRPNREGDREAIVSALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 590
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 591 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 650
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 651 VGRTARAGRAGRSVSLVGEEERKMLKEIVKSA---KAPVKARILPQDVILKFR 700
>gi|410953778|ref|XP_003983547.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Felis catus]
Length = 920
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 359 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 414
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF
Sbjct: 415 VLVLVPTRELGIQV------------------HSVTKQLAQF------------------ 438
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 439 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 474
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 475 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 511
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 512 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 556
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 557 FLRQEFVRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 613
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 614 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 673
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 674 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 723
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 193/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R L AL++ PTR+LA Q
Sbjct: 40 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILQALLDNPQR-LFALILTPTRELAFQ- 97
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
I+E C A+ +G+ + VG
Sbjct: 98 --------------------ISEQC------------------EALGSGIGVKCAVIVGG 119
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF+L L
Sbjct: 120 IDMMSQALMLAKKPH---------------------IIIATPGRLIDHLENTKGFSLRTL 158
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 159 KYLVMDEADRILNMDFEKEVDKLLKVIPKERR-------TFL------------------ 193
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + T+Y+ E+L+ L SK
Sbjct: 194 -------------FSATMTKKVQKLQRASLQAPVKVEVA-TKYQTVEKLQQSYLFIPSKF 239
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV +L L +VF + + R+ +L + G + G QS R L
Sbjct: 240 KDCYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLG---LDAVPLHGQMSQSKRLGAL 296
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +LV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 297 NKFKSKSRSILVATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRSVTF 356
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 357 VTQYDVELYQRI 368
>gi|10434683|dbj|BAB14343.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 209/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYDHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|125601387|gb|EAZ40963.1| hypothetical protein OsJ_25445 [Oryza sativa Japonica Group]
Length = 414
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 189/452 (41%), Gaps = 103/452 (22%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQ 71
+ E I L RD+ TGSGKT ++ALPI+Q L R C A V+ PTR+LA+Q
Sbjct: 9 IQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQ 68
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ F A+ A+ L + +G
Sbjct: 69 IAKQ---------------------------------------FEALGSAISLQCSVLIG 89
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L KRP ++V TPGRL+DH+ T+GF+
Sbjct: 90 GIPRTSQTISLAKRPH---------------------VVVGTPGRLLDHLTNTKGFSFNK 128
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE D LL+ +Q + +L + + TFL
Sbjct: 129 LKYLVLDEADDLLKVDFQKAVDDILNVIPKERR-------TFL----------------- 164
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
SAT+T+ KL + L +P+ + ++Y L + L + +K
Sbjct: 165 --------------FSATMTEKVKKLRRACLKNPVKVEVA-SKYSLVDTLRQDLYVVPAK 209
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YL+ +L + +VF + EST L +L + LR K SG Q R
Sbjct: 210 YKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LRFKAISISGQMSQDKRLGA 266
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR +LV +D +RG+D++GV+ V+NYD P K YIHR GRTARAGQ G +
Sbjct: 267 LNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVS 326
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
L+++ E + FK Q + P + + I
Sbjct: 327 LVNQFEGEFFKLTEQFLGGEEIPARKVDADEI 358
>gi|73992237|ref|XP_534451.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Canis lupus familiaris]
Length = 765
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 203 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQSPVTR 258
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF
Sbjct: 259 VLVLVPTRELGIQV------------------HSVTKQLAQF------------------ 282
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 283 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 318
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 319 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 355
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 356 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 400
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 401 FLRQEFVRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 457
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 458 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 517
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 518 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 567
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 199/438 (45%), Gaps = 103/438 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E + L +D+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+LA Q
Sbjct: 25 IQTEALPVALQGKDVIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRELAYQ- 82
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
IAE F A+ +G+S + VG
Sbjct: 83 --------------------IAEQ------------------FEALGSTIGVSCVVIVGG 104
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P +++ATPGRL+DH+ T+GF L L
Sbjct: 105 IDMMTQALQLAKKP---------------------HVMIATPGRLVDHLENTKGFNLRGL 143
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++A + +L++ +P RR
Sbjct: 144 KYLVMDEADRILNMDFEAEIDKILKV---------------IPKQ-------RRT----- 176
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + T+Y+ +L+ + +K
Sbjct: 177 -----------YLYSATMTKKVAKLQRASLQDPVKVEVS-TKYQTVSKLQQSYIFIPAKY 224
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV++L +VF S+ +T R+ LL + G I + G QS R TL
Sbjct: 225 KDCYLVSILNEFAGNSFMVFCSTCNNTQRVALLLRNLGLTAIPL---HGQLSQSKRLGTL 281
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 282 NKFKSKSRSILIATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRAGKAITF 341
Query: 433 LHKDEVKRFKKLLQKADN 450
+ + +V+ ++++ Q D
Sbjct: 342 VTQYDVELYQRIEQLIDK 359
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 203/463 (43%), Gaps = 114/463 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLP 64
P+Q AV + L RD+C + TGSGKT ++ LP+++ + +R R A LV++P
Sbjct: 203 PIQAAV----VPLALTGRDICGRAVTGSGKTAAFMLPLLERMLHRGARAAAATHVLVLVP 258
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+QV H + QF S+
Sbjct: 259 TRELAVQV------------------HQMTMRLAQFTSI--------------------- 279
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
L VG S + +EL RP +I+VATPGRL+DH+ T
Sbjct: 280 RAALVVGGLSANTQAAELRTRP---------------------EIVVATPGRLIDHVRNT 318
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
LE L LV+DE DRLL +L + ++ +
Sbjct: 319 HSVGLEDLAALVLDEADRLL---EMGFLEEIREI-------------------------V 350
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPERL 301
R C R M+ SATLT +LA+ + HP L+ G T L E +
Sbjct: 351 RHCPTRRQT----------MLFSATLTSGVQELAEFSMKHPARLSADQIGTTPGTLTEEV 400
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ S +K +L+AL+ +K IVF+ + + HRL ++ G I E G
Sbjct: 401 LRLRPGAAS-MKEAHLMALVNRTFTKKSIVFSRTKQQAHRLKIVMGLAG---IVAAELHG 456
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q+ R L++FR G+ LV++D RG+D+ GV+ V++YD P + +Y+HR GRTA
Sbjct: 457 DLSQTQRLAALESFRVGEASHLVATDVAARGLDIAGVDAVISYDAPRTLASYLHRVGRTA 516
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIE 464
RAG+ G T + + + K K + ++ S+P+ ++E
Sbjct: 517 RAGKRGTALTFMEESDRKLVKAVSKRGSK--LVARSLPNHVVE 557
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 103/431 (23%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q++
Sbjct: 47 EAIPLTLEGKDVIGLAETGSGKTAAFAIPILQALLENPQRYF-ALILTPTRELAFQISEQ 105
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
F A+ ++G+ + VG +
Sbjct: 106 ---------------------------------------FEALGSSIGVKCAVIVGGMDM 126
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P IL+ATPGRL+DH+ T+GF L L +L
Sbjct: 127 MSQALLLAKKPH---------------------ILIATPGRLVDHLENTKGFNLRSLKFL 165
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DR+L ++ + +L++ +P RR
Sbjct: 166 VMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT-------- 195
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K +
Sbjct: 196 --------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKFKDV 246
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
YLV +L L ++F ++ +T R LL + G + + G Q+ R L F
Sbjct: 247 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTKF 303
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T + +
Sbjct: 304 KAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQ 363
Query: 436 DEVKRFKKLLQ 446
+V+ ++++ Q
Sbjct: 364 YDVELYQRIEQ 374
>gi|186703621|emb|CAQ43234.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
Length = 609
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 210/465 (45%), Gaps = 114/465 (24%)
Query: 7 FPVQVAVWQETIG----------PGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAV 54
FP+Q + T+ L R D+ +N+ TGSGKTL+Y++PI++ LS R V
Sbjct: 190 FPIQTVLLDNTLSLLNFTLGVTKKNLTRRVGDILVNASTGSGKTLAYSIPIIEALSKRTV 249
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
LR LV++PT+ L + QV D
Sbjct: 250 NKLRVLVIVPTKLL---------------------------------------IGQVFDT 270
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
+ +A GL + ++ ++S+ +E + + Y+P DIL+ TP
Sbjct: 271 MSKLAQGTGLIISISKLENSLKEEHQKFMN---------YEP-----------DILIVTP 310
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DH+ T+++L LV+DE D LL +++Q W ST L
Sbjct: 311 GRLVDHLQIG-SITMKNLMMLVLDEADHLLNQSFQNW-------------------STEL 350
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET 293
+ S K + G ++KMV SATLT + KL L L++P LF+
Sbjct: 351 MNNIKSHKLDQMPG-----------NVIKMVFSATLTTNTEKLHGLHLYNPKLFVRDSVK 399
Query: 294 RYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
Y LP++L+ Y + +S KPL+L+ LL L K +VF S E++ RL LL
Sbjct: 400 LYNLPDKLQEYNVNVPTAKSLYKPLFLLHLLNRLQNAKALVFVKSNEASLRLAPLLAIMI 459
Query: 351 ELRI----KIKEYSGLQRQSVRSKTLKAFREGKI----QVLVSSDAMTRGMDVEGVNNVV 402
E R+ + + +S + + F Q+L+++D M+RG+D+ + +V+
Sbjct: 460 EKRMGASHNVLSVNSNNTKSENKRLVHQFATSDTKESNQILITTDLMSRGIDINDITDVI 519
Query: 403 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
NYD P + Y+HR GRTARA G LL ++F ++K
Sbjct: 520 NYDPPISSQQYVHRCGRTARALGRGNAHNLLVGKGERKFWTQIEK 564
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 195/434 (44%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q+L R AL++ PTR+LA Q+
Sbjct: 45 IQKEAIPVALQGKDVIGLAETGSGKTAAFALPILQSLLENPQRYF-ALILTPTRELAFQI 103
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + A+ +G+ + VG
Sbjct: 104 S---------------------------------------EQIEALGANIGVKCAVIVGG 124
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P IL+ATPGRL+DH+ T+GF L+ L
Sbjct: 125 MDMMSQALILAKKPH---------------------ILIATPGRLLDHLENTKGFNLKAL 163
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 164 KYLVMDEADRILNMDFEVEVDKILKVIPRERH-------TFL------------------ 198
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + T+Y+ E+L+ Y + K
Sbjct: 199 -------------FSATMTKKVKKLQRACLRDPVKVEVS-TKYQTVEKLQQYYIFIPVKF 244
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L + ++F S+ +T R LL + G + + G Q+ R L
Sbjct: 245 KDVYLVHILNEMAGNSFMIFCSTCNNTIRTALLLRNLGLTAVPL---HGQMSQNKRLAAL 301
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 302 TKFKAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 361
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 362 VTQYDVELYQRIEQ 375
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+
Sbjct: 39 IQAEVLPHALQGRDIIGVAATGSGKTAAFALPILQKLWEEP-KGLFACVMAPTRELAYQI 97
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ QF+SL A+G+ VG
Sbjct: 98 SQ------------------------QFESL---------------GSAIGVRCATIVGG 118
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
I D+ L KRP I+VATPGRL DH+ T+GF+L L
Sbjct: 119 MPIMDQAVALAKRPH---------------------IVVATPGRLNDHLENTKGFSLRGL 157
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + + +L++ + +T+L
Sbjct: 158 KFLVMDEADRLLDMDFGPIIDKILKVIPKER-------TTYL------------------ 192
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + E +Y L Y L
Sbjct: 193 -------------FSATMTTKVAKLQRASLSNPVRVEVSE-KYSTVSTLLQYYLFIPLVQ 238
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++L+ L SL + I+FT +V RL +L G + + G QS R L
Sbjct: 239 KDVHLIYLANSLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH---GQLSQSARLGAL 295
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +VLV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 296 GKFKSGGRKVLVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTL 355
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++
Sbjct: 356 VTQYDVELVQRI 367
>gi|15422163|gb|AAK95821.1| RNA helicase-like protein [Homo sapiens]
Length = 796
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 209/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 236 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 291
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 292 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 315
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 316 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 351
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 352 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 388
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 389 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 433
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 434 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 490
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y HR
Sbjct: 491 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYDHR 550
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 551 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 600
>gi|225718584|gb|ACO15138.1| Probable ATP-dependent RNA helicase DDX47 [Caligus clemensi]
Length = 470
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 201/432 (46%), Gaps = 101/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L RD+ + TGSGKT ++ALP++Q L + R L AL++ PTR+LA Q+
Sbjct: 56 IQKEAIPVALTGRDVIGLAETGSGKTGAFALPVLQALLEKPQR-LFALILTPTRELAYQI 114
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F + ++G+ G+ VG
Sbjct: 115 S---------------------------------------ETFEKLGKSIGIKCGVLVGG 135
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL+DH+ T+GF L L
Sbjct: 136 MDMMSQALVLGKKPH---------------------IIVATPGRLIDHMENTKGFDLRSL 174
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YL++DE DR+L ++ + +L + LP G R+
Sbjct: 175 KYLIMDEADRILNMDFEIEVDKIL---------------SSLPRGEG-----RK------ 208
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
M+ SAT+T+ KL + L +P+ + ++Y+ ++L Y L K
Sbjct: 209 ----------NMLFSATMTKKVAKLQRASLQNPVRVEVS-SKYQTVDKLLQYYLFIPLKY 257
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV ++ L I+F+S+ T +L LL + G I + +G Q+ R +L
Sbjct: 258 KEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPL---NGQMSQNKRLASL 314
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ GR T
Sbjct: 315 NKFKTKSRSILIATDVASRGLDIPHVDIVINYDIPTHSKDYIHRVGRTARAGRSGRAITF 374
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 375 VCQYDVELYQRI 386
>gi|392884823|ref|NP_490891.2| Protein Y71G12B.8 [Caenorhabditis elegans]
gi|373219451|emb|CCD67990.1| Protein Y71G12B.8 [Caenorhabditis elegans]
Length = 739
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 211/471 (44%), Gaps = 111/471 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRA 59
G S P+Q Q I L +D+C + TG+GKT ++ LPI++ + R C R
Sbjct: 167 GYSDPTPIQ----QACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRV 222
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV++PTR+LA+ QV VF ++
Sbjct: 223 LVLVPTRELAI---------------------------------------QVFQVFRKLS 243
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
+ L V L G G+ ++ L+S D++VATPGRL+D
Sbjct: 244 TFIQLEVCLCAG-------------------GLDLKAQEAA--LRSGPDVVVATPGRLID 282
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H++ + F L ++ LV+DE DR+L EA++ + +++L
Sbjct: 283 HLHNSPSFNLSNIEVLVLDEADRMLEEAFRDQMNELIRL--------------------- 321
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE---TRYK 296
C R ++ SAT+T++ ++LA + L P+ + E T K
Sbjct: 322 -------CAQNRQT----------LLFSATMTEEIDELASMSLQKPVKIFINENTDTALK 364
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
L + + E+ + + + AL+ + IVF + + R+ LL G IK+
Sbjct: 365 LRQEFIRIRAGRETDREAM-VAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLG---IKV 420
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
+ Q R ++L F++ +I VLVS+D +RG+D+EGV V+N + P IK YIHR
Sbjct: 421 GQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHR 480
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
GRTARAG+ GR +L+ +DE K K+++ + + + ++E+ R
Sbjct: 481 VGRTARAGKAGRSISLVGEDERKLLKEIVNSNADRTLKQRLVAPEVVEAYR 531
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 197/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L RD+ + TGSGKT +++LPI+Q+L + R L ALV+ PTR+LA Q+
Sbjct: 52 IQREAIPVALEGRDVIGLAETGSGKTGAFSLPILQSLLDTPTR-LFALVLTPTRELAFQI 110
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ + VG
Sbjct: 111 S---------------------------------------EQFEALGGRIGVKCAVVVGG 131
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P +++ATPGRL+DH+ T+GF+L +
Sbjct: 132 VDMMTQALALAKKPH---------------------VVIATPGRLVDHLENTKGFSLRSV 170
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L + + +L++ E R T+L
Sbjct: 171 KYLVMDEADRILNMDFGEEVDKILKVL--SRERR-----TYL------------------ 205
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + LH+P+ + T+Y+ ++L+ + SK
Sbjct: 206 -------------YSATMTKKVQKLQRASLHNPIKVEVS-TKYQTVDKLQQSYIFIPSKY 251
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV++L +VF S+ +T R +L + G I + G Q R L
Sbjct: 252 KDCYLVSILNEFAGNSFMVFCSTCANTQRTAVMLRNLGLPAIPL---YGKMAQMKRLGAL 308
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 309 SKFKSKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRAITF 368
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 369 VTQYDVELYQRI 380
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 194/440 (44%), Gaps = 108/440 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q E+I L +RDL + TGSGKT ++ALPI+Q L ++ + L
Sbjct: 71 MGYKAPTPIQA----ESIPLALQDRDLIGLAETGSGKTAAFALPILQALMDKP-QSFFGL 125
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F A+
Sbjct: 126 VLAPTRELAFQISQS---------------------------------------FEALGS 146
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 147 TINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDH 185
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 186 LENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKIL--PRERR-----TFL------ 232
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-LPE 299
SAT++ L + L +PL ++ +Y+ +
Sbjct: 233 -------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVST 267
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
L+SY+ I K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 268 LLQSYRFIPH-KHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLH-- 324
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR GR
Sbjct: 325 -GQLSQSSRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGR 383
Query: 420 TARAGQLGRCFTLLHKDEVK 439
TARAG+ G + + + +V+
Sbjct: 384 TARAGKSGVAISFVTQYDVE 403
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 108/453 (23%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
G+S+L F V + +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 273 GLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTR 332
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q C HS+A F ++
Sbjct: 333 VLILCPTRELAMQ---------C---------HSVATKIASFTDIM-------------- 360
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
V L +G S+ + EL KRP DI++ATPGR +
Sbjct: 361 -------VCLCIGGLSLKLQEQELRKRP---------------------DIVIATPGRFI 392
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ ++GFT+E++ +V+DE DR+L + + L ++Q
Sbjct: 393 DHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQA-------------------- 432
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETRYK 296
C P R M+ SAT+T + L +L L+ P+ F+ +T K
Sbjct: 433 --------C---------PKSRQT-MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAK 474
Query: 297 LPERLESYKLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + E ++ + +L +P L+ L + L + I+F S H++ + FG L +
Sbjct: 475 LLTQ-EFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVI---FGLLSLN 530
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R + L+ FR+GK L+++D +RG+D++G+ V+NY+ PA + Y+H
Sbjct: 531 ATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ GR TL + + K K + + +
Sbjct: 591 RVGRTARAGRSGRAITLAGEGDRKVLKGVFKNS 623
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 196/454 (43%), Gaps = 104/454 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + E I L +D+ + TGSGKT ++A+PI+Q L + A LV+ PTR
Sbjct: 91 FAKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQALWH-AQTPYFGLVLAPTR 149
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ KD F A+ +GL
Sbjct: 150 ELAFQI---------------------------------------KDTFDALGATMGLRS 170
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG + D+ +L+++P I+VATPGR+MDH+ T+G
Sbjct: 171 VCIVGGMDMMDQARDLMRKPH---------------------IIVATPGRIMDHLEHTKG 209
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L++L YLV+DE DRLL + L +L++ +P
Sbjct: 210 FSLKNLKYLVMDEADRLLDMDFGPALDKILKV---------------IP----------- 243
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
P+ + SAT+T KL + LH+P+ + T+Y+ + L +
Sbjct: 244 ------------PKRTTYLFSATMTNKIEKLQRASLHNPVRVAVS-TKYQTADNLVQSMM 290
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K L+ LL + IVFT +V R L G + + G Q+
Sbjct: 291 LVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPL---HGQLSQA 347
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R +L F+ K +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG+
Sbjct: 348 QRLGSLNKFKSSKANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRS 407
Query: 427 GRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 460
G+ +L+ + +++ + + ++ A P PS
Sbjct: 408 GKSISLITQYDLEMYLR-IENALGKKLPKEEKPS 440
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 197/444 (44%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+QV E + L RDL + TGSGKT ++ALPI+Q L + A
Sbjct: 26 LGWKAPTPIQV----EALPLALQGRDLIGLAQTGSGKTAAFALPILQALFQQC-HPFFAC 80
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q++ + F A+
Sbjct: 81 VLSPTRELAIQIS---------------------------------------EQFEALGS 101
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG S+ D+ L K P I+VATPGRL+DH
Sbjct: 102 QIGVRSVAIVGGVSMVDQAVALGKNPH---------------------IVVATPGRLLDH 140
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L ++ YLV+DE D++L ++ + +L++ + + TFL
Sbjct: 141 LTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEILKVVPRERK-------TFL------ 187
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T KL + L +P + ++Y
Sbjct: 188 -------------------------FSATMTNKVAKLQRACLRNPTKVEV-SSKYTTALT 221
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ + +K K Y V LL + +VFT + +ST RL +L G I I S
Sbjct: 222 LKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFTRTCDSTRRLALILRSLGFGAIPI---S 278
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS RS L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIHR GRT
Sbjct: 279 GQMSQSKRSGALLKFKAGDRNLLICTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRT 338
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ GR +++ + +V +K++
Sbjct: 339 ARAGRSGRAISIVTQYDVDLYKRI 362
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 195/431 (45%), Gaps = 103/431 (23%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E++ L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q++
Sbjct: 46 ESLPHALEGRDIIGVASTGSGKTAAFALPILQKLWEDP-KGLFACVLAPTRELAYQISQ- 103
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
QF+SL A+G + VG +
Sbjct: 104 -----------------------QFESL---------------GSAMGARCAVIVGGMDM 125
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L KRP I+VATPGRLM H+ T+GF+L + +L
Sbjct: 126 PAQAIALAKRPH---------------------IVVATPGRLMQHLEETKGFSLRSIKFL 164
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DRLL + A + +L++ + +T+L
Sbjct: 165 VLDEADRLLDLDFGASIDKILKVIPKER-------TTYL--------------------- 196
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
SAT+T KL + L +P+ + ++Y+ L Y L+ K K
Sbjct: 197 ----------FSATMTTKVAKLQRASLSNPVRIEV-SSKYQTVSTLLQYYLLMPLKDKDA 245
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
YL+ L+ SL + I+FT +V RL +L G + + G QS R L F
Sbjct: 246 YLIYLINSLAQNSIIMFTRTVHDAQRLSIILRTLGFPAVPLH---GQLSQSQRLGALGKF 302
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ G +VLV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL+ +
Sbjct: 303 KSGGRRVLVATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVTQ 362
Query: 436 DEVKRFKKLLQ 446
+V+ +++ Q
Sbjct: 363 YDVELVQRIEQ 373
>gi|344232268|gb|EGV64147.1| hypothetical protein CANTEDRAFT_122357 [Candida tenuis ATCC 10573]
Length = 563
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 194/436 (44%), Gaps = 102/436 (23%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L
Sbjct: 178 DILVNASTGSGKTLAYSIPIIESLCTRVVPRVRAIILVPTKPL----------------- 220
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
+ QVK ++ L V SI +E +L
Sbjct: 221 ----------------------VSQVKQTLLQLSKGTSLYVMNLRNDISIREEAEKLTGN 258
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
P DI+V+TPGRL++H+ L L YLV+DE DRLL
Sbjct: 259 PP--------------------DIIVSTPGRLVEHVTGN-SIDLNSLRYLVIDEADRLLG 297
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+++Q W +++ + ++ + +K R+ K+V
Sbjct: 298 QSFQNWSRVLVERLEA-----------------------KQSSMVESWK----LRVQKLV 330
Query: 266 LSATLTQDPNKLAQLDLHHP-LFLTTGETR-----YKLPERLESYKL---ICESKLKPLY 316
SATLT D KLA L + P L + E + + P L + L +S LKPL
Sbjct: 331 FSATLTTDAGKLAMLHFYKPRLVIVNDEEKLVNEMFSTPRTLSEFTLQFSSNKSSLKPLI 390
Query: 317 LVA-LLQSLGEEKCIVFTSSVESTHRLCTLL----NHFGELRIKIKEYSGLQRQSVRSKT 371
L L++S +VFT S E++ RL LL + FG + S R K
Sbjct: 391 LAKFLMKSNKLSNVLVFTKSNEASIRLSKLLSLVFDGFGVSMVVEYLNSTNNSTMARKKL 450
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L AF G++ VLV +D + RG+DV + +VVNYD P + Y+HR GRTARA GR +
Sbjct: 451 LMAFDSGQVNVLVVTDLIARGIDVLSITDVVNYDMPNSSREYVHRVGRTARANNDGRAYN 510
Query: 432 LLH-KDEVKRFKKLLQ 446
+ K E++ +LL+
Sbjct: 511 FVFGKGEMRWMSRLLR 526
>gi|19114747|ref|NP_593835.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654514|sp|Q9P6N8.1|RRP3_SCHPO RecName: Full=ATP-dependent rRNA helicase rrp3
gi|7708606|emb|CAB90153.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe]
Length = 465
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 193/444 (43%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q QE I L +RD+ + TGSGKT ++ALP++Q L N A+
Sbjct: 64 LGFKTPTPIQ----QEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFF-AV 118
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F AI
Sbjct: 119 VLAPTRELAYQIS---------------------------------------EQFEAIGG 139
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++G+ + VG + + L K+P +LV TPGRLMDH
Sbjct: 140 SIGVRSVVIVGGMDMVTQAVALSKKPH---------------------VLVCTPGRLMDH 178
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L++L YL++DE DRLL + + +L++
Sbjct: 179 LENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKII--------------------- 217
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
P+ R ++ SAT+T KL + LH P+ + +++ +
Sbjct: 218 ----------------PHERRT-LLFSATMTSKVEKLQRASLHQPVRVAVS-SKFSTVDT 259
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K YLV L+ L I+F +V T RL LL G I +
Sbjct: 260 LIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPL---H 316
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L F+ G LV++D RG+D+ V+ V+NYD P K YIHR GRT
Sbjct: 317 GQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRT 376
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G+ L+ + +++ F ++
Sbjct: 377 ARAGRAGKSIALVTQYDLEPFLRI 400
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 189/433 (43%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G ++ P+Q ++I L RD+ + TGSGKT ++ALPI+Q L ++ L L
Sbjct: 71 LGYTNPTPIQA----QSIPHALQNRDVIGLAETGSGKTAAFALPIIQALLDKPSH-LFGL 125
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ ++ F A+
Sbjct: 126 VLAPTRELAAQIAAS---------------------------------------FEALGS 146
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
V L V + VG + + L K+P I+VATPGRL+DH
Sbjct: 147 LVNLRVAVIVGGLDMVAQAIALGKKPH---------------------IVVATPGRLVDH 185
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 186 LEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK---------------FIPRE--- 227
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L P+ ++ + ++
Sbjct: 228 ----RRT----------------FLFSATMSSKIESLQRASLRDPVRISISSSSHQTVST 267
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + C K YLV L+ +K ++FT +V T RL LL G I I
Sbjct: 268 LIQNYIFCPHNKKDTYLVYLVNEYSGKKIVLFTRTVTETQRLAILLRTLGFGAIPIH--- 324
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R L FR G +LV++D RG+D+ V+ V+N+D P+ KTY+HR GRT
Sbjct: 325 GQLNQTARLGALNKFRAGSRDILVATDVAARGLDIPLVDVVINFDIPSDSKTYVHRVGRT 384
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G+ T++
Sbjct: 385 ARAGKSGKAITIM 397
>gi|67967779|dbj|BAE00372.1| unnamed protein product [Macaca fascicularis]
Length = 764
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 208/467 (44%), Gaps = 110/467 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLP 64
F ++ + I GL +D+C + TG+GKT ++ALP+++ L R R LV++P
Sbjct: 206 FKQPTSIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVP 265
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV HS+ QF +
Sbjct: 266 TRELGIQV------------------HSVTRQLAQF---------------------CNI 286
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ LAVG + + EA L++A DIL+ATPGRL+DH++
Sbjct: 287 TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLIDHLHNC 325
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F L + L++DE DR+L E ++ + + I
Sbjct: 326 PSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------------I 357
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
R C R M+ SAT+T + LA + L +P+ + P + +
Sbjct: 358 RMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEF 407
Query: 305 KLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
I ++ + + ALL + ++FT + + HR+ LL G +++ E G
Sbjct: 408 IRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGN 464
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR GRTAR
Sbjct: 465 LSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTAR 524
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
AG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 525 AGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 568
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 194/440 (44%), Gaps = 103/440 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + + E + L RD+ + TGSGKT ++ LPI+Q L + L A V+ PTR
Sbjct: 37 FKIPTEIQVEALPHALEGRDIIGVAATGSGKTAAFGLPILQKLWEEP-KGLFACVLAPTR 95
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ Q +SL A+G
Sbjct: 96 ELAYQISQ------------------------QLESL---------------GSAMGARC 116
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L KRP I+VATPGRLMDH+ T+G
Sbjct: 117 AVIVGGMDMPAQAIALAKRPH---------------------IVVATPGRLMDHLEKTKG 155
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L ++ +LV+DE DRLL + + +L+L + +T+L
Sbjct: 156 FNLRNIKFLVLDEADRLLDLDFGTIIDKILKLIPKER-------TTYL------------ 196
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T KL + L +P+ + T+Y+ L Y L
Sbjct: 197 -------------------FSATMTTKVAKLQRASLSNPVRVEV-STKYQTVSTLLQYYL 236
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K K YLV L +L + I+FT +V RL +L G + + G QS
Sbjct: 237 LMPLKDKDAYLVYLANTLAQNSIIIFTRTVHDASRLSIILRTLGFPAVPLH---GQLSQS 293
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ G +VLV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+
Sbjct: 294 QRLGALGQFKSGGRRVLVATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRA 353
Query: 427 GRCFTLLHKDEVKRFKKLLQ 446
G+ TL+ + +V+ +++ Q
Sbjct: 354 GKSITLVTQYDVELVQRIEQ 373
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 182/423 (43%), Gaps = 102/423 (24%)
Query: 11 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 70
A+ QE I L +RD+ + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA
Sbjct: 86 TAIQQEAIPLALQDRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAA 144
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q+ + F A+ + L L +
Sbjct: 145 QIAQS---------------------------------------FEALGSLINLRCALLL 165
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G + + L K+P ++VATPGRL+DH+ T+GF+L
Sbjct: 166 GGLDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLR 204
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+L Y V+DE DRLL + L +L+ FLP RR
Sbjct: 205 NLRYCVMDEADRLLDMDFGPILEKILK---------------FLPRE-------RRT--- 239
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
+ SAT++ L + L PL + ++Y+ L S L
Sbjct: 240 -------------FLFSATMSSKVESLQRASLRDPLKVNVSTSKYQTVSTLVSNYLFIPH 286
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K Y + L + IVFT +V T R+ LL G I + + GL QS R
Sbjct: 287 IHKDTYFIYLCNEFAGKTMIVFTRTVLETQRIAILLRTLGMGAIPL--HGGLS-QSARLG 343
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+ G
Sbjct: 344 ALSKFRAGTRNILVATDVAARGLDIPNVDCVINYDLPQDSKTYIHRVGRTARAGKSGHAL 403
Query: 431 TLL 433
+++
Sbjct: 404 SIV 406
>gi|449486366|ref|XP_002191498.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Taeniopygia guttata]
Length = 757
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G P+Q A I GL +D+C + TG+GKT ++ LP+++ L R R
Sbjct: 197 LGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITR 252
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF ++
Sbjct: 253 VLVLVPTRELGIQV------------------HSVTKQLAQFSNV-------------TT 281
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
AVG GL V A L+S DIL+ATPGRL+
Sbjct: 282 CLAVG---GLDVKTQEAA--------------------------LRSGPDILIATPGRLI 312
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +++L
Sbjct: 313 DHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRL-------------------- 352
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ LA + L +P+ + P
Sbjct: 353 --------CSHHRQ----------TMLFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAP 394
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL ++ ++FT + + HR+ LL G +++
Sbjct: 395 FLRQEFIRIRPNREGDREAIVTALLTRTFQDHVMLFTQTKKQAHRMHILLGLMG---LRV 451
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R ++L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 452 GELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 511
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 512 VGRTARAGKAGRSVSLVGEEERKMLKEIVKTA---KTPVKARILPQDVILKFR 561
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ E+I L RD+ + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 69 PTQIQA--ESIPLALQGRDVIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 125
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ QV+ A+ + +
Sbjct: 126 LAYQISE-----------------------------------QVE----ALGSLISVRCA 146
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 147 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 185
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L +L YLV+DE DRLL + L +L++ LP RR
Sbjct: 186 SLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 223
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
+ SAT++ L + L +PL ++ +Y+ L L
Sbjct: 224 ----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQNYLF 267
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K +Y V LL + IVFT +V T RL LL G I + G QS
Sbjct: 268 IPHKYKDIYFVYLLNEFPGQSVIVFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 324
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 325 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 384
Query: 428 RCFTLLHKDEVKRFKKL 444
F+L+ + +++ ++++
Sbjct: 385 HAFSLVTQFDIEIWQRI 401
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 212/473 (44%), Gaps = 118/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
MG+ P+Q A + L +D+ + TGSGKT ++ +PI++ L R A
Sbjct: 204 MGLHKPTPIQAAA----VPVALLGKDVVGGAVTGSGKTAAFTIPIIERLLYRDKGKNAAA 259
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL VV+PTR+LA+Q C + +A H+ C
Sbjct: 260 TRCL---VVVPTRELAVQ---------CFEVGTRMAGHTDVRFC---------------- 291
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
L VG S+ + + L RP D+L+AT
Sbjct: 292 --------------LVVGGLSLKSQEAALRSRP---------------------DVLIAT 316
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH++ + FTL+ L LV+DE DR+L E+ F+D T
Sbjct: 317 PGRLIDHLHNSPSFTLDALDILVLDEADRML-------------------EDGFADELTE 357
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+ ++ C V R M+ SAT+T +KL +L L P+ +
Sbjct: 358 I---------VKACPVSR----------QTMLFSATMTDSVDKLIRLSLTKPVRIFVDAK 398
Query: 294 RYKLPERLESYKLICESKLK--PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
R ++ + + K K P L+ + + + + IVF S + H++ + FG
Sbjct: 399 RSMAKGLVQEFVRVRPEKEKERPALLLCICKRTFKTRVIVFFRSKKLAHQMRIV---FGL 455
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
L +K E G Q R K L+AFR+G + L+++D +RG+D++G+ V+N+D P+ +
Sbjct: 456 LDMKCDELHGDLSQEQRLKALQAFRDGSVDYLMATDLASRGLDIKGIETVINFDMPSQLA 515
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ-KADNDSCPIHSIPSSLI 463
Y+HR GRTARAG+ GR T + + + K + +++ A DS +P+ ++
Sbjct: 516 QYLHRVGRTARAGKTGRSVTFVGEADRKMLRAVVKHSAGEDSVRHRVVPADVV 568
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 196/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 65 IQRESIPVALQGKDIIGLAETGSGKTAAFALPILQALLENPQRHF-ALILTPTRELAFQI 123
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ + VG
Sbjct: 124 S---------------------------------------EQFEALGSGIGVKSIVIVGG 144
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH++ T+GF L L
Sbjct: 145 LDMTSQALMLAKKPH---------------------IIIATPGRLVDHLSNTKGFNLRAL 183
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++A + +L++ + TFL
Sbjct: 184 KFLVMDEADRILNMDFEAEVDKILKVIPRERR-------TFL------------------ 218
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ NKL + L P+ + T+Y+ E+L Y + +K
Sbjct: 219 -------------FSATMTKKVNKLQRACLQDPVRVEVS-TKYQTVEKLLQYYVFIPAKF 264
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L +VF S+ +T R LL + G + + G Q+ R L
Sbjct: 265 KDVYLVHILNENAGNSFMVFCSTCNNTIRTALLLRNLGFTAVPL---HGQMSQNKRLAAL 321
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 322 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPMHSKDYIHRVGRTARAGRSGKAITF 381
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 382 VTQYDVELYQRI 393
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ V E I L +D+ + TGSGKT ++ALPI+Q+L R L LV+ PTR+
Sbjct: 62 PTKIQV--EAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR-LHTLVLTPTRE 118
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 119 LAFQIS---------------------------------------EQFEALGSSIGVKCA 139
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 140 VIVGGIDMMSQSLVLAKKPH---------------------IVIATPGRLIDHMENTKGF 178
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L L +LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 179 SLRALKFLVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL------------- 218
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L P+ T+Y ++L+ Y +
Sbjct: 219 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-TKYSTVDKLQQYYVF 259
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
+K K YLV++L L ++F S+ + R+ +L + G I + G Q+
Sbjct: 260 IPAKYKDCYLVSILNELAGNSFMIFCSTCNNAQRVALMLRNLGITAIPL---HGQMSQNK 316
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ VL+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G
Sbjct: 317 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSG 376
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T + + +V+ F+++
Sbjct: 377 KSITFVTQYDVELFQRI 393
>gi|345328224|ref|XP_001507068.2| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Ornithorhynchus anatinus]
Length = 716
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I G+ +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 156 MGFKQPTPIQKAC----IPVGMLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 211
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF ++
Sbjct: 212 VLVLVPTRELGIQV------------------HSVTKQLAQFSNV--------------- 238
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA + P DIL+ATPGRL+
Sbjct: 239 ------TTCLAVGGLDVKTQ----------EAALRAGP-----------DILIATPGRLI 271
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + ++++
Sbjct: 272 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIKM-------------------- 311
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T + LA + L +P+ + P
Sbjct: 312 --------CSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 353
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 354 FLRQEFVRIRPNREGDREAVVSALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 410
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I VLV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 411 GELHGNLSQTQRLEALRRFKDEQIDVLVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 470
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 471 VGRTARAGRAGRSVSLVGEEERKMLKEIVKTA---KAPVKARILPQDVILKFR 520
>gi|395829165|ref|XP_003787731.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Otolemur garnettii]
Length = 795
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 235 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 290
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 291 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 314
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 315 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 350
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 351 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 387
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 388 -----IRLCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 432
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 433 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 489
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 490 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 549
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E + K++++ A P+ + +P +I R
Sbjct: 550 VGRTARAGRAGRSVSLVGEEERRMLKEIVKAA---KAPVKARILPQDVILKFR 599
>gi|308497817|ref|XP_003111095.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
gi|308240643|gb|EFO84595.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
Length = 749
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 209/460 (45%), Gaps = 107/460 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLAL 70
+ Q I L +D+C + TG+GKT ++ LPI++ + R C R LV++PTR+LA+
Sbjct: 181 IQQACIPVALSGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAI 240
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
QV VF ++ + L V L
Sbjct: 241 ---------------------------------------QVFQVFRKLSTFIQLEVCLCA 261
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G G+ ++ L+S D++VATPGRL+DH++ + F L
Sbjct: 262 G-------------------GLDLKAQEAA--LRSGPDVVVATPGRLIDHLHNSPNFNLG 300
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ LV+DE DR+L EA++ + +++L ENR +
Sbjct: 301 SIEVLVLDEADRMLEEAFRDQMNELIRLC---AENRQT---------------------- 335
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE---TRYKLPERLESYKLI 307
++ SAT+T++ ++LA + L P+ + E T KL + +
Sbjct: 336 -------------LLFSATMTEEIDELASMSLQRPVKIFINENTDTALKLRQEFIRIRAG 382
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
E+ + + + AL+ + IVF + + R+ LL G IK+ + Q
Sbjct: 383 RETDRESM-VAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLG---IKVGQMQSSLTQGQ 438
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R ++L F++G+I VLVS+D +RG+D+EGV V+N + P IK YIHR GRTARAG+ G
Sbjct: 439 RIESLSKFKKGEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAG 498
Query: 428 RCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
R +L+ ++E K K+++ + + + ++E+ R
Sbjct: 499 RSISLVGEEERKLLKEIVNSNADRTLKQRLVAPEVVEAYR 538
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 28 IQREAIPLVLEGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 86
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ ++G+ + VG
Sbjct: 87 SEQ---------------------------------------FEALGSSIGVKCAVIVGG 107
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L +
Sbjct: 108 MDMHAQGLLLEKKP---------------------HIIIATPGRLVDHLENTKGFNLRQI 146
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+L++DE DR+L ++ + +L++ +P RR
Sbjct: 147 KFLIMDEADRILNMDFEVEVNKILRV---------------MPRE-------RRT----- 179
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 180 -----------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKF 227
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F + +T R LL + G + + G Q+ R L
Sbjct: 228 KDVYLVHILNELAGNNFMIFCGTCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAAL 284
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 285 TKFRAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 344
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 345 ITQYDVELYQRIEQ 358
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 194/437 (44%), Gaps = 105/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ V + + L D+ + TGSGKT ++ALPI+Q L + L A V+ PTR+
Sbjct: 42 PTQIQV--DAVPVALKGHDIIGLAQTGSGKTATFALPILQALLENP-QPLFACVLSPTRE 98
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA+Q IAE F A+ +GL
Sbjct: 99 LAIQ---------------------IAEQ------------------FEALGSGIGLKCA 119
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L KRP ++V TPGRL+DH+ T+GF
Sbjct: 120 VLVGGIDMMAQSVALAKRP---------------------HVVVGTPGRLVDHLTNTKGF 158
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L + YLV+DE DRLL ++ + +L++ + T+L
Sbjct: 159 SLRTIKYLVLDEADRLLNMDFEQEIDEILKVIPKERR-------TYL------------- 198
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T KL + L +P+ + +Y + L+ L
Sbjct: 199 ------------------FSATMTTKVAKLQRACLKNPVKVEV-SAKYSTVDSLKQEYLF 239
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
+K K YLV +L L +VFT + E+T +L +L + G + I I SG Q
Sbjct: 240 IPAKYKDCYLVYILNELAGNTAMVFTRTCEATRKLSLVLRNLGFVAIPI---SGQMSQPK 296
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ G +L+ +D +RG+D+ VN V+NYD P K YIHR GRTARAG+ G
Sbjct: 297 RLGALAKFKAGDCNILICTDVASRGLDIPSVNLVINYDIPTNSKDYIHRVGRTARAGRSG 356
Query: 428 RCFTLLHKDEVKRFKKL 444
R +++ + +V+ ++K+
Sbjct: 357 RAISMVCQYDVELYQKI 373
>gi|324510572|gb|ADY44421.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 560
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 200/472 (42%), Gaps = 112/472 (23%)
Query: 2 GISSLFPVQVAVWQETIGPG-----LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
I FPVQ +V I L RDL I++PTGSGKTL Y LPI+ +LS A
Sbjct: 113 NIKKWFPVQHSVLPHLIAESKCASILPPRDLAISAPTGSGKTLCYILPILNSLSYTAAPS 172
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+ AL+V P ++L Q+ + K+ D F
Sbjct: 173 IHALIVAPVQNLVTQIEAEFKKF---------------------------------DAF- 198
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
G+ L G + E +L ++ ATPGR
Sbjct: 199 ------GIQTALLCGNHDVNAERRQL----------------------KTARVVFATPGR 230
Query: 177 LMDH-INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
LM+H ++ + HL YL++DE DR+ + A WL + Q + L
Sbjct: 231 LMEHLVDPVSHMDVSHLRYLIIDEADRMSQTARLEWLDALEQ-------------AAHLT 277
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR 294
+ S+ + L K+++SATL++D KL L +P LF + E
Sbjct: 278 GGWTSVDDLLSVR-----------HLQKILVSATLSRDVEKLHTWKLRYPRLFKASAEYS 326
Query: 295 YK------------------LPERLESYKLICESKLKPLYLVALLQSLGEEKCI-VFTSS 335
+ LP L + +ICE ++KPL L +Q + K I VF ++
Sbjct: 327 EEVKNAMSIADVDQIEGAALLPSSLSHHVVICELRMKPLALYVEVQDKPQWKRILVFANN 386
Query: 336 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 395
++ RL LL +++E S R K L F++G +VL+SSD ++RG+DV
Sbjct: 387 KLASRRLAILLKVLSADVYRVEELSSNLFGRRRQKVLNRFKKGSTRVLISSDVLSRGIDV 446
Query: 396 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
+ V+ V+NYDKP + +IHR RTAR G+ G +L E K + +L K
Sbjct: 447 QDVDVVINYDKPISERLFIHRVVRTARCGKPGTAISLTTSGERKDLESMLSK 498
>gi|409051554|gb|EKM61030.1| hypothetical protein PHACADRAFT_24252 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 202/458 (44%), Gaps = 117/458 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------AVRCLRAL 60
P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R A RC+
Sbjct: 219 PIQAA----TIPVALLGKDIVGNAVTGSGKTAAFMIPMIERLMYRERGKKAAATRCM--- 271
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V++PTR+L +Q C + +A H+ C
Sbjct: 272 VLVPTRELGVQ---------CYEVGTKLAAHTDIRFC----------------------- 299
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
L VG S+ + L RP DI++ATPGRL+DH
Sbjct: 300 -------LVVGGLSLKSQEVALRTRP---------------------DIIIATPGRLIDH 331
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I T FTL+ L LV+DE DR+L E +Q L +
Sbjct: 332 IRNTPTFTLDTLDILVLDEADRMLSEGFQDELAEI------------------------- 366
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
I+ C V R M+ SAT+T ++L ++ L+ P+ L R
Sbjct: 367 ---IKSCPVSR----------QTMLFSATMTDSVDELVRMSLNQPVRLFVDPKRTTARGL 413
Query: 301 LESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
L+ + + SK + LV+L + + ++F S + H++ + FG L +K E
Sbjct: 414 LQEFVRVRASKEDERSALLVSLCKRTFKGGVLIFFRSKKLAHQMRIV---FGLLGMKASE 470
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G Q R + L+AFREG + L+++D +RG+D++G++ V+NYD P + Y+HR G
Sbjct: 471 LHGDLTQEQRLQALQAFREGSVDYLMATDLASRGLDIKGIDTVINYDMPGQVAQYLHRVG 530
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 456
RTARAG+ GR TL+ + + K K ++ A + H
Sbjct: 531 RTARAGKKGRSVTLVGEADRKILKAAIKHASGEDQVRH 568
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 185/427 (43%), Gaps = 103/427 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + E I L +D+ + TGSGKT ++A+PI+Q L A LV+ PTR
Sbjct: 85 FTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALWE-AQAAYYGLVLAPTR 143
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ K+ F A+ ++GL
Sbjct: 144 ELAYQI---------------------------------------KETFDALGSSMGLRS 164
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG + D+ +L+++P ILVATPGR+MDH+ T+G
Sbjct: 165 VCIVGGMDMMDQARDLMRKPH---------------------ILVATPGRIMDHLEHTKG 203
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L++L YLV+DE DRLL + L +L++ + +T+L
Sbjct: 204 FSLKNLKYLVMDEADRLLDMDFGPALDKILKIIPTQR-------TTYL------------ 244
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T KL + LH+P+ + +Y+ + L +
Sbjct: 245 -------------------FSATMTNKIAKLQRASLHNPVRVAVS-NKYQTADNLVQSMM 284
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K YL+ LL + I+FT + + R L G + + G Q+
Sbjct: 285 LVSDGYKNTYLIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPL---HGQLTQA 341
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R +L F+ GK +L+++D RG+D+ V+ V+NYD P K YIHR GRTARAG+
Sbjct: 342 QRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKS 401
Query: 427 GRCFTLL 433
G+ +L+
Sbjct: 402 GKSISLI 408
>gi|432110218|gb|ELK33991.1| Putative ATP-dependent RNA helicase DDX27 [Myotis davidii]
Length = 863
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
M P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MNFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTKQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVSALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R ++L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGKAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 569
>gi|301621509|ref|XP_002940090.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Xenopus
(Silurana) tropicalis]
Length = 760
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 216/473 (45%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
M + P+Q A I GL +D+C + TG+GKT ++ LP+++ L R R
Sbjct: 201 MSFTQPTPIQKAC----IPIGLLGKDICACAATGTGKTAAFMLPVLERLIYKPREAPVTR 256
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV H+++ + QF +
Sbjct: 257 VLVLVPTRELGIQV------------------HAVSRLLAQFTEV--------------- 283
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L+S D+L+ATPGRL+
Sbjct: 284 ------TTCLAVGGLDVKTQ----------EAA-----------LRSGPDVLIATPGRLI 316
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F+L+ + L++DE DR+L E ++ + +++L
Sbjct: 317 DHLHNCPSFSLDSIEVLILDEADRMLDEYFEEQMKEIIRL-------------------- 356
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C +R ++ SAT++++ LA + L +P+ + P
Sbjct: 357 --------CSHQRQ----------TLLFSATMSEEVKDLASVSLRNPVRIFVNSNTDVAP 398
Query: 299 ERLESYKLICESKLKPLYLVA--LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ VA LL ++ ++FT + + HR+ LL G +++
Sbjct: 399 FLRQEFVRIRPNREGDREAVACALLTRTFQDHVMLFTQTKKQAHRMHILLGLMG---LRV 455
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R ++L+ F++ +I +LV++D RG+D++GV V+N P +K Y+HR
Sbjct: 456 GELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIDGVKTVINLTMPGTVKHYVHR 515
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++KA P+ + IP +I R
Sbjct: 516 VGRTARAGKAGRSVSLVGEEERKMLKEIVKKA---QAPVKARVIPQDVISKFR 565
>gi|47682722|gb|AAH69876.1| Ddx51 protein, partial [Mus musculus]
Length = 260
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 129/228 (56%), Gaps = 17/228 (7%)
Query: 261 LVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GETRYKLPERLESYK 305
L K++ SATLTQDP KL +L L+ P +T +Y P L +
Sbjct: 18 LQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHY 77
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
+ C KPL ++ L+ + + + FT+S E++HRL L FG + + E+S
Sbjct: 78 VPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAFGG--VSVAEFSSRYGP 135
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y++TY+HR GRTARAG+
Sbjct: 136 GQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGK 195
Query: 426 LGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
G+ FTLL K + ++F +++ +A H IP L++ L Y++
Sbjct: 196 TGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVARYETA 243
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I + +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 50 IQREAIPLTIQGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 108
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ ++G+ + VG
Sbjct: 109 SEQ---------------------------------------FEALGASIGVKCVVIVGG 129
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 130 MDMMTQSLMLAKKPH---------------------IIIATPGRLVDHLENTKGFNLRSL 168
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 169 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 201
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 202 -----------LLFSATMTKKVQKLQRASLQNPVKVEVS-TKYQTVEKLQQYYVFIPVKF 249
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T R LL G + + + G Q+ R L
Sbjct: 250 KDVYLVHILNELSGNSFMIFCSTCNNTMRTALLLRSLGFMAVPL---HGQMSQNKRIAAL 306
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G T
Sbjct: 307 TKFKAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGISVTF 366
Query: 433 LHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 367 VTQYDVELYQRIEQ 380
>gi|242042443|ref|XP_002468616.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
gi|241922470|gb|EER95614.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
Length = 454
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 201/460 (43%), Gaps = 113/460 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 70
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q IAE F A+ A+GL + V
Sbjct: 110 Q---------------------IAEQ------------------FEALGSAIGLRCSVLV 130
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G ++ + KRP I+V TPGRL+DH+ T+GF+L+
Sbjct: 131 GGVDRVQQVLSIGKRPH---------------------IVVGTPGRLLDHLTETKGFSLK 169
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ YLV+DE D+LL ++ L +L+ D TFL
Sbjct: 170 KIKYLVLDEADKLLNVEFEKSLDDILREIPKDRR-------TFL---------------- 206
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T+ NKL + L +P + ++Y + L+ +
Sbjct: 207 ---------------FSATMTKKVNKLQRACLRNPAKVEAA-SKYSTVDSLKQEFYFVPA 250
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K YL+ +L + ++F + EST L +L + G +K SG Q R
Sbjct: 251 DDKDCYLLHVLNERQDSMIMIFVRTCESTRLLALMLRNLG---LKAMSISGQMSQDKRLG 307
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G
Sbjct: 308 ALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAV 367
Query: 431 TLLHKDEVKRF---KKLL------QKADNDSCPIHSIPSS 461
+L+++ E + F +KLL +K D D I P S
Sbjct: 368 SLVNQYEAQWFVLIEKLLGKQIDQRKVDRDEVMILKGPIS 407
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 187/435 (42%), Gaps = 103/435 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F A+ +E I L ++D+ + TGSGKT ++A+P++Q L +V+ PTR
Sbjct: 62 FKAPSAIQKEAIPAALKQQDIIGLAQTGSGKTAAFAIPVIQALWENPCPFF-GVVLAPTR 120
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ + F A+ A+G+
Sbjct: 121 ELAYQIS---------------------------------------EQFEALGGAMGVKS 141
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + + K+P ILV TPGRLMDH+ T+G
Sbjct: 142 VVIVGGMDMVTQAVAISKKPH---------------------ILVCTPGRLMDHLENTKG 180
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L +L YLV+DE DRLL + + +L++ + TFL
Sbjct: 181 FSLRNLKYLVMDEADRLLDMDFGPIIDKILKVIPKERR-------TFL------------ 221
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T KL + LH+P+ + + L+ Y L
Sbjct: 222 -------------------FSATMTSKVEKLQRASLHNPVRIAVSSKFSTVDTLLQKY-L 261
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K YLV ++ + + I+FT +V T R+ LL G I + G QS
Sbjct: 262 FFPFKHKDTYLVYIVNEMAGQSMIIFTRTVNDTQRVAILLRSLGFSAIPL---HGQLSQS 318
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ G +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG+
Sbjct: 319 SRLGALNKFKSGARSILVATDVAARGLDIPLVDAVINYDIPTDSKAYIHRVGRTARAGRS 378
Query: 427 GRCFTLLHKDEVKRF 441
G+ L+ + +++ F
Sbjct: 379 GKSIALVTQYDLEPF 393
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 183/421 (43%), Gaps = 102/421 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++ I L RDL + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA Q+
Sbjct: 96 IQEQAIPLALQNRDLIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAAQI 154
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
A F A+ + L L +G
Sbjct: 155 AQA---------------------------------------FEALGSMISLRCALILGG 175
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P ++VATPGRL+DH+ T+GF+L +L
Sbjct: 176 LDMVQQAIALGKKPH---------------------VIVATPGRLLDHLEKTKGFSLRNL 214
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L+ FLP RR
Sbjct: 215 KYLVMDEADRLLDMDFGPILEKILK---------------FLPRE-------RRT----- 247
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L PL ++ ++Y+ L + +
Sbjct: 248 -----------FLFSATMSSKVESLQRASLRDPLKVSISTSKYQTVSTLVQHYIFIPHIH 296
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ L+ + I+FT +V T R+ LL G I + + GL QS R L
Sbjct: 297 KDTYLIYLVNEFAGKTIIIFTRTVLETQRIAILLRTLGMGAIPL--HGGLS-QSARLGAL 353
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+ G +
Sbjct: 354 NKFRAGSRNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISF 413
Query: 433 L 433
+
Sbjct: 414 V 414
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 192/430 (44%), Gaps = 105/430 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +DL + TGSGKT ++ALPI+Q L A + A V+ PTR+LA+Q
Sbjct: 35 IQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE-APQAFFACVLSPTRELAIQ- 92
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
IAE F A+ +G+ + VG
Sbjct: 93 --------------------IAEQ------------------FEALGSGIGIKCAVLVGG 114
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP ++V TPGRL+DH+ T+GF+L L
Sbjct: 115 VDMVQQAINLAKRP---------------------HVVVGTPGRLVDHLTNTKGFSLRTL 153
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL E ++ + +L NE
Sbjct: 154 KYLVLDEADRLLNEDFEKSIDEIL------NE---------------------------- 179
Query: 253 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PR + L SAT+T+ KL + L +P+ + T+Y + L+ +K
Sbjct: 180 -----IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA-TKYSTVDTLKQQYCFIPAK 233
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YLV +L + +VFT + ++T L +L + G I I SG Q+ R
Sbjct: 234 YKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPI---SGQMTQAKRLGA 290
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ G+ +L+ +D +RG+D+ V+ V+NYD P+ K YIHR GRTARAG+ G +
Sbjct: 291 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAIS 350
Query: 432 LLHKDEVKRF 441
L+++ E++ +
Sbjct: 351 LVNQYELEWY 360
>gi|291239420|ref|XP_002739621.1| PREDICTED: Rs1-like [Saccoglossus kowalevskii]
Length = 563
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 209/469 (44%), Gaps = 120/469 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPT 65
P+QVA TI L +D+C + TG+GKT ++ LP+++ L + R LV++PT
Sbjct: 21 PIQVA----TIPVALLGKDICACAATGTGKTAAFMLPVLERLLYKPKQAAVTRVLVLVPT 76
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF---DSLLFISLPQVKDVFAAIAPAV 122
R+L +QV HS+ QF DS L AV
Sbjct: 77 RELGIQV------------------HSVTRQLAQFTEIDSCL----------------AV 102
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
G GL V KL+ + L+ DI++ATPGRL+DH++
Sbjct: 103 G---GLDV----------------KLQEAV----------LRQGPDIVIATPGRLIDHLH 133
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
F+L ++ L++DE DR+L E ++ + +
Sbjct: 134 NAPSFSLSNIEILILDEADRMLDEYFEEQMKEI--------------------------- 166
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 302
IR C + R M+ SAT+T + L + L +P+ L E +
Sbjct: 167 -IRMCSITRQ----------TMLFSATMTDEVKDLVAVSLKNPVRLFINENTDVAYNLRQ 215
Query: 303 SYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
+ I E++ + AL + IVF + + HRL +L G L + + E
Sbjct: 216 EFIRIRENREGDREAIAAALCSRTFHDHVIVFVQTKKQCHRLHIIL---GMLGLNVGELH 272
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R +TL+ F+E I +++++D RG+D+EG+ ++N+ P +K Y+HR GRT
Sbjct: 273 GNLSQTQRLETLRRFKESNIDIMLATDLAARGLDIEGIKTIINFTMPNTVKHYVHRVGRT 332
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
ARAG+ GR +L + E K K+++++A N P+ S +P ++ R
Sbjct: 333 ARAGKSGRSVSLCGEKERKMLKEIVKRARN---PVKSRVVPPDIVAKYR 378
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 180/409 (44%), Gaps = 103/409 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+D+ + TGSGKT ++A+PI+Q+L A R ALV+ PTR+LA Q+
Sbjct: 102 KDIIGLAQTGSGKTAAFAIPILQSLWE-AQRPYYALVLAPTRELAYQI------------ 148
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
K+ F A+ +G+ VG + D+ +L++
Sbjct: 149 ---------------------------KETFDALGSGMGVRSVCIVGGMDMMDQARDLMR 181
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+P ILVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL
Sbjct: 182 KPH---------------------ILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLL 220
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+ L +L++ + +T+L
Sbjct: 221 DMDFGPALDKILKVIPTKR-------TTYL------------------------------ 243
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
SAT+T KL + LH P+ + +Y+ + L ++ K +L+ LL
Sbjct: 244 -FSATMTNKIAKLQRASLHEPVKVAVS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEF 301
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ IVFT + T R L G + + G QS R +L F+ GK +L+
Sbjct: 302 MGKSIIVFTRTCAHTQRSTLLARILGFSAVPL---HGQLTQSQRLGSLNKFKSGKANILI 358
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
++D RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ +L+
Sbjct: 359 ATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLV 407
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 180/409 (44%), Gaps = 103/409 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+D+ + TGSGKT ++A+PI+Q+L A R ALV+ PTR+LA Q+
Sbjct: 102 KDIIGLAQTGSGKTAAFAIPILQSLWE-AQRPYYALVLAPTRELAYQI------------ 148
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
K+ F A+ +G+ VG + D+ +L++
Sbjct: 149 ---------------------------KETFDALGSGMGVRSVCIVGGMDMMDQARDLMR 181
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+P ILVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL
Sbjct: 182 KPH---------------------ILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLL 220
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+ L +L++ + +T+L
Sbjct: 221 DMDFGPALDKILKVIPTKR-------TTYL------------------------------ 243
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
SAT+T KL + LH P+ + +Y+ + L ++ K +L+ LL
Sbjct: 244 -FSATMTNKIAKLQRASLHEPVKVAVS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEF 301
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ IVFT + T R L G + + G QS R +L F+ GK +L+
Sbjct: 302 MGKSIIVFTRTCAHTQRSTLLARILGFSAVPL---HGQLTQSQRLGSLNKFKSGKANILI 358
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
++D RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ +L+
Sbjct: 359 ATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLV 407
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 187/433 (43%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++ L AL
Sbjct: 108 LGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-PLFAL 162
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ A F A+
Sbjct: 163 VLAPTRELAAQIAQA---------------------------------------FEALGS 183
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L L +G + + L K+P ++VATPGRL+DH
Sbjct: 184 LISLRCALILGGMDMVTQAIALGKKPH---------------------VIVATPGRLLDH 222
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L + YLV+DE DRLL + L +L+ FLP
Sbjct: 223 LEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILK---------------FLPRE--- 264
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL ++ +Y
Sbjct: 265 ----RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVST 304
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+S + K YLV L + I+FT +V T R+ LL G I + +
Sbjct: 305 LKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL--HG 362
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
GL QS R L FR G ++LV++D RG+D+ V+ V+N+D P KTY+HR GRT
Sbjct: 363 GLS-QSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRT 421
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G +++
Sbjct: 422 ARAGKSGHAISIV 434
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 187/433 (43%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++ L AL
Sbjct: 108 LGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-PLFAL 162
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ A F A+
Sbjct: 163 VLAPTRELAAQIAQA---------------------------------------FEALGS 183
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L L +G + + L K+P ++VATPGRL+DH
Sbjct: 184 LISLRCALILGGMDMVTQAIALGKKPH---------------------VIVATPGRLLDH 222
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L + YLV+DE DRLL + L +L+ FLP
Sbjct: 223 LEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILK---------------FLPRE--- 264
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL ++ +Y
Sbjct: 265 ----RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVST 304
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+S + K YLV L + I+FT +V T R+ LL G I + +
Sbjct: 305 LKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL--HG 362
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
GL QS R L FR G ++LV++D RG+D+ V+ V+N+D P KTY+HR GRT
Sbjct: 363 GLS-QSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRT 421
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G +++
Sbjct: 422 ARAGKSGHAISIV 434
>gi|452845537|gb|EME47470.1| hypothetical protein DOTSEDRAFT_146146 [Dothistroma septosporum
NZE10]
Length = 570
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 218/477 (45%), Gaps = 120/477 (25%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLS-NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
D+ +N+PTGSGKT++Y LPI++ L + A L AL+++PTR+L QV +
Sbjct: 111 DVAVNAPTGSGKTIAYLLPIIEALRRSHAPGELSALIIVPTRELVQQVAA---------- 160
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
V ++A + VG++ + DE ++I
Sbjct: 161 -----------------------------VAESLAKGSDICVGMSGSTGTFRDEQGKIIN 191
Query: 145 RPKLEAGICYDPEDVLQELQ--------------SAVDILVATPGRLMDHINATRGFTLE 190
G YDP Q++ SAV++LVATPGRL++HIN T GF L
Sbjct: 192 -----CGQRYDPAGYQQQIDDAVNGLVQHVPTYDSAVNVLVATPGRLLEHINNTPGFNLV 246
Query: 191 HLCYLVVDETDRLLREAYQAWLPTV-LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 249
L +LV+DE D+LL Y+ +L ++ ++L R +L R+ G
Sbjct: 247 RLTWLVIDEADKLLDNQYEGFLESLNVELERPRTTEEQDARECYL----------RQKGR 296
Query: 250 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--------------- 294
++++ ++ K++LSAT+T+D +KL L L P + T
Sbjct: 297 WEEWRER---KIRKIILSATMTKDISKLTTLKLRRPQMVVVRGTECEQQMIAGAELMKED 353
Query: 295 --------YKLPERLESYKL-ICESKLKPLYLVALL------QSLGEEK-------CIVF 332
++LP L Y + + + KPL LL +S +EK ++F
Sbjct: 354 GVKQTVDGFELPRTLVEYSIPVGDGAEKPLIAFELLRTQILRESDSKEKSQTDTPTVLIF 413
Query: 333 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF-REGKIQVLVSSDAMTR 391
TS ES RL LL +S V++ L+ ++ + ++VS+D R
Sbjct: 414 TSRNESATRLSHLLKGIQ------PSWSRYITTLVKTTKLRVTSKKSEPAIIVSTDRAAR 467
Query: 392 GMD-VEG--VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
G+D + G + +VV YD P +++Y+HR GRTARAG+ G+ +TL+ + E K F + +
Sbjct: 468 GLDNIAGRPITHVVQYDVPRSVESYVHRVGRTARAGRSGQAWTLVTRAEGKWFNETI 524
>gi|398407893|ref|XP_003855412.1| hypothetical protein MYCGRDRAFT_68754 [Zymoseptoria tritici IPO323]
gi|339475296|gb|EGP90388.1| hypothetical protein MYCGRDRAFT_68754 [Zymoseptoria tritici IPO323]
Length = 736
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 212/468 (45%), Gaps = 110/468 (23%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVNSARCKYCCKNI 84
D+ +++ TGSGKT++Y LP+++ L A R L ALVV+PTR+L +QV +A CK
Sbjct: 297 DVAVSAATGSGKTIAYLLPMIEALRRNATRGRLGALVVVPTRELVVQV-AAVADSLCKG- 354
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
C GL VG+A G DE +
Sbjct: 355 ------------C-------------------------GLKVGMATGTGKFKDEQDHAKE 377
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
++ I + V SAVDILVATPGRL++HI++T GF L +L +L++DE D+LL
Sbjct: 378 EQRMRDTIHGITQHVAT-YDSAVDILVATPGRLLEHISSTPGFNLVYLQWLIIDEADKLL 436
Query: 205 REAYQAWLPTV---LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 261
Y+ +L ++ L RS +E + + +R G+ + D RL
Sbjct: 437 DNQYEGFLDSLNAELARPRSIHEQDVRE------------QYLRSKGM---WDDVRERRL 481
Query: 262 VKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GETR----------YK 296
K+VLSAT+T+D +KL L L P + G+ R ++
Sbjct: 482 RKVVLSATMTRDISKLTSLRLRRPTMIAVRGSEGIDAQARPGARGDGRDDGFRENASGFE 541
Query: 297 LPERLESYKL-ICESKLKPLYLVALLQSLGEEKCI-VFTSSVESTHRLCTLLNHFGELRI 354
LP L Y + + + KPL S + + +FT+S ES +RL LL
Sbjct: 542 LPRTLIEYCVPVGDGSEKPLVRHRKDSSQPQAPTVLIFTASNESVNRLSHLLK------- 594
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQ---------VLVSSDAMTRGMDV---EGVNNVV 402
+IK + R TL + GK + V+VS+D RG+D + +V+
Sbjct: 595 EIKPS-----WARRITTLVKLKPGKARITAKADESAVVVSTDRAARGLDSFSNRPITHVI 649
Query: 403 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
YD P + YIHR GRTARAG+ G +TL E + F + KA N
Sbjct: 650 QYDVPRSLTGYIHRVGRTARAGRDGDAWTLYTHSEARWFVNEITKASN 697
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 194/434 (44%), Gaps = 107/434 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 70
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALEGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q+ F A+ +GL V + V
Sbjct: 127 QIGQQ---------------------------------------FEALGSGIGLIVAVIV 147
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 148 GGVDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLK 186
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 187 ALKFLIMDEADRILNMDFEVELDKILKVIPKERR-------TYL---------------- 223
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T+ +KL + L P ++ TRYK + L+ + + +
Sbjct: 224 ---------------FSATMTKKVSKLERASLRDPARVSIS-TRYKTVDNLKQHYIFIPN 267
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K K YLV LL IVF ++ +T ++ +L G + + G Q R
Sbjct: 268 KYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPL---HGQMSQEKRLG 324
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
+L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G
Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAI 384
Query: 431 TLLHKDEVKRFKKL 444
T++ + +V+ ++K+
Sbjct: 385 TVVTQYDVEAYQKI 398
>gi|358055869|dbj|GAA98214.1| hypothetical protein E5Q_04897 [Mixia osmundae IAM 14324]
Length = 835
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 105/456 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA--LVVLPTRDLAL 70
+ +TI L +D+ +S TGSGKT+++ L +++ L R + R LV+ PTR+LA+
Sbjct: 294 IQAQTIPVALMGKDIVASSNTGSGKTVAFWLGVLERLLYRDKKDARTRVLVICPTRELAV 353
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
QV HS+ + ++ + F L V
Sbjct: 354 QV------------------HSVGKALARYTDISFC---------------------LCV 374
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G S+ + +EL +RP D++V+TPGRL+DH+ T FTL+
Sbjct: 375 GGLSLKVQEAELRQRP---------------------DVVVSTPGRLIDHVRNTSTFTLD 413
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L L++DE DR+L E ++ L + I+ C
Sbjct: 414 SLEILIIDEADRILEEGFRDELTEI----------------------------IKEC--- 442
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
P R ++ SAT+T+D N+LA+L L P+ + ET + ++ + I +
Sbjct: 443 ------PRSRQ-SLLFSATITEDVNELARLSLDKPVRIKIDETGTTVESLMQEFLRIRKD 495
Query: 311 --KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 368
+ L+A+ Q + I+F S ++ HR LL G + +E G Q R
Sbjct: 496 TPASREAALLAICQRTFRGQTIIFFRSKQAAHRARILLGLCG---LAAEELHGDLSQEQR 552
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
++L+ F+EG L ++D +RG+D++GV +V+N++ P Y+HR GRTARAG GR
Sbjct: 553 LQSLQNFKEGTATHLCATDLASRGLDIKGVQSVINFEMPGSFDIYLHRVGRTARAGNAGR 612
Query: 429 CFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIE 464
TL+ + K K+ + A D +P +I+
Sbjct: 613 ALTLVGDSDRKMVKQATKAAPADRFKQRVLPPEVIK 648
>gi|118351203|ref|XP_001008880.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89290647|gb|EAR88635.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 643
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 193/445 (43%), Gaps = 110/445 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA-VRCLRALVVLPT 65
FP + I L +DL +S TGSGKT ++ +PI+Q +AL+V PT
Sbjct: 212 FPTNIQSL--AIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRSPFTNYSKALIVTPT 269
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+LA Q+ +VF + L
Sbjct: 270 RELAFQI---------------------------------------YEVFTKLNKYTKLR 290
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
L +GQS++ + +EL P ++++ATPGRL+DH+ +R
Sbjct: 291 ACLVIGQSAMQKQEAELRGNP---------------------EVIIATPGRLIDHLQNSR 329
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
L++L L+ DE D+LL ++A + +
Sbjct: 330 SIDLDNLEVLIFDEADKLLDLGFEAAAQNI----------------------------VE 361
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPERLE 302
C ER ++ SATLT + NKL + L P+ + G+T KL +++
Sbjct: 362 NCNRERQ----------TLLFSATLTSEVNKLIDIALRKPIRIQANPDGQTNDKLIQKML 411
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
I + L+A+ +E+ I+F + THR+ + FG +K+ E G
Sbjct: 412 R---IQHEDFREAALLAIAAKYYKERTIIFFKTKRQTHRMAIIFGLFG---LKVCELHGD 465
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q+ R + F+EGK Q L+++D +RG+D++GV V+N++ P+ + YIHR GRTAR
Sbjct: 466 LTQNQRIQAFSDFKEGKYQYLMATDLASRGLDIQGVKAVINFELPSEVTRYIHRVGRTAR 525
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQK 447
AG G T+ E+K KK+L++
Sbjct: 526 AGNEGISLTIGLDAELKTLKKMLKE 550
>gi|196003440|ref|XP_002111587.1| hypothetical protein TRIADDRAFT_23405 [Trichoplax adhaerens]
gi|190585486|gb|EDV25554.1| hypothetical protein TRIADDRAFT_23405, partial [Trichoplax
adhaerens]
Length = 463
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 198/452 (43%), Gaps = 106/452 (23%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
IS+L F + TI L +D+C + TG+GKT ++ LPI++ L R R R
Sbjct: 31 AISTLGFEHPTPIQSSTIPIALLGKDICACAATGTGKTAAFMLPILERLIYRPKRIPVTR 90
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+LA+QV S C ++ E C
Sbjct: 91 VLVLVPTRELAIQVFSVGKSLC---------QYTDIEFC--------------------- 120
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LA G IA + EA + +P DI++ATPGRL+
Sbjct: 121 ---------LAAGGLDIASQ----------EAALRRNP-----------DIVIATPGRLV 150
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F L+ + LV+DE DR + E ++ + +++L+ +
Sbjct: 151 DHLHNTPSFDLQGIEILVLDEADRQIHEHFKDQMDELIRLSPKGRQT------------- 197
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
M+ SAT+T + +LA L L+ P+ L
Sbjct: 198 -------------------------MLFSATMTDEVEELATLSLNKPIRLFINRNTDVAN 232
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + AL E+C++F HRL +L G L + +
Sbjct: 233 NLRQEFIRIRPAREDDREAIIAALCYRQFNERCLIFMPMKWQVHRLRIVL---GLLGLSV 289
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + F++G+I +LV++D RG+D+EGV V+NY+ PA K Y+HR
Sbjct: 290 DELHGNLTQLQRLEAFNRFKKGEIGILVATDLAARGLDIEGVRTVINYNIPATTKQYVHR 349
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
GRTARAGQ GR TL+ + E K K +++ +
Sbjct: 350 VGRTARAGQFGRSITLVVEKERKLLKTIVKNS 381
>gi|212722850|ref|NP_001131651.1| uncharacterized protein LOC100193011 [Zea mays]
gi|194692160|gb|ACF80164.1| unknown [Zea mays]
gi|413934956|gb|AFW69507.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 455
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 199/460 (43%), Gaps = 113/460 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 70
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q IAE F A+ A+GL + V
Sbjct: 110 Q---------------------IAEQ------------------FEALGSAIGLRCSVLV 130
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G ++ + KRP I+V TPGRL+DH+ T+GF+L+
Sbjct: 131 GGVDRVQQVLSIGKRPH---------------------IVVGTPGRLLDHLTETKGFSLK 169
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ YLV+DE D+LL ++ L +L D TFL
Sbjct: 170 KIKYLVLDEADKLLNVEFEKSLDDILSEMPKDRR-------TFL---------------- 206
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T+ NKL + L +P + ++Y + L+ +
Sbjct: 207 ---------------FSATMTKKVNKLQRACLRNPAKVEVS-SKYSTVDSLKQEFYFVPA 250
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K YL+ +L E ++F + EST L +L + G +K SG Q R
Sbjct: 251 DDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLG---LKAMSISGQMSQDKRLG 307
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G
Sbjct: 308 ALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAV 367
Query: 431 TLLHKDEVKRF--------KKLLQ-KADNDSCPIHSIPSS 461
+L+++ E + F KK+ Q K D D I P S
Sbjct: 368 SLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPIS 407
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ Q + L +D+ + TGSGKT ++A+P++Q+L + + LV+ PTR+LA Q+
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-QAFFCLVLTPTRELAFQI 128
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
F A+ +GL V + VG
Sbjct: 129 GQQ---------------------------------------FEALGSGIGLIVAVIVGG 149
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+A + L +RP I+VATPGRL+DH+ T+GF L+ L
Sbjct: 150 VDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLKAL 188
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+L++DE DR+L ++ L +L++ + T+L
Sbjct: 189 KFLIMDEADRILNMDFEVELDKILKVIPRERR-------TYL------------------ 223
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ +KL + L P ++ TRYK + L+ + + +K
Sbjct: 224 -------------FSATMTKKVSKLERASLRDPARVSIS-TRYKTVDNLKQHYIFVPNKY 269
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV LL IVF ++ +T ++ +L G + + G Q R +L
Sbjct: 270 KETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPL---HGQMSQEKRLGSL 326
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G T+
Sbjct: 327 NKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAITV 386
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++K+
Sbjct: 387 VTQYDVEAYQKI 398
>gi|195621064|gb|ACG32362.1| ATP-dependent RNA helicase DDX47 [Zea mays]
Length = 455
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 199/460 (43%), Gaps = 113/460 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 70
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q IAE F A+ A+GL + V
Sbjct: 110 Q---------------------IAEQ------------------FEALGSAIGLRCSVLV 130
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G ++ + KRP I+V TPGRL+DH+ T+GF+L+
Sbjct: 131 GGVDRVQQVLSIGKRPH---------------------IVVGTPGRLLDHLTETKGFSLK 169
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ YLV+DE D+LL ++ L +L D TFL
Sbjct: 170 KIKYLVLDEADKLLNVEFEKSLDDILSEMPKDRR-------TFL---------------- 206
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T+ NKL + L +P + ++Y + L+ +
Sbjct: 207 ---------------FSATMTKKVNKLQRACLRNPAKVEVS-SKYSTVDSLKQEFYFVPA 250
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K YL+ +L E ++F + EST L +L + G +K SG Q R
Sbjct: 251 DDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLG---LKAMSISGQMSQDKRLG 307
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G
Sbjct: 308 ALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPINSKDYVHRVGRTARAGRSGYAV 367
Query: 431 TLLHKDEVKRF--------KKLLQ-KADNDSCPIHSIPSS 461
+L+++ E + F KK+ Q K D D I P S
Sbjct: 368 SLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPIS 407
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 207/436 (47%), Gaps = 106/436 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 318 GLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 377
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
++++PTR+LA+Q C N+ A F + F L
Sbjct: 378 VVILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 409
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 410 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 437
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 438 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 482
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L+ P+ L + +
Sbjct: 483 QT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVG 519
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L +K+
Sbjct: 520 TLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLLGLKV 576
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 577 TELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 636
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR TL
Sbjct: 637 VGRTARAGRSGRACTL 652
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 191/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + + L
Sbjct: 66 MGYKAPTPIQ----RESIPLALKGRDLIGLAETGSGKTAAFALPILQALMEKP-QPFFGL 120
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F ++
Sbjct: 121 VLAPTRELAYQISKS---------------------------------------FESLGA 141
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++G+ + VG + + L K+P I+VATPGRL+DH
Sbjct: 142 SMGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGRLLDH 180
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 181 LENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL------ 227
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT++ L + L +PL ++ ++Y+
Sbjct: 228 -------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQTVST 262
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 263 LLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLH--- 319
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR GRT
Sbjct: 320 GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRT 379
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 380 ARAGKSGLAISFVAQYDVE 398
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 188/432 (43%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++I L RDL + TGSGKT ++ALPI+Q L N A V+ PTR+LA Q+
Sbjct: 38 IQAQSIPFALQGRDLVALAQTGSGKTAAFALPILQALWNEPSPFF-ACVLAPTRELAYQI 96
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ + VG
Sbjct: 97 S---------------------------------------EQFQALGSTIGVRCAVIVGG 117
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP I+VATPGRL DH+ T+GF+L+ +
Sbjct: 118 MDMMTQSIALSKRPH---------------------IIVATPGRLQDHLENTKGFSLKAI 156
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + T+L++ + +TFL
Sbjct: 157 KYLVMDEADRLLDMDFGPVIDTILKIIPRER-------NTFL------------------ 191
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + T+Y + L K
Sbjct: 192 -------------FSATMTTKVAKLQRASLSNPVKVEV-STKYSTVDTLVQEYCFFPFKH 237
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV L L + IVF +V RL +L G + + G QS R L
Sbjct: 238 KETYLVYLCNELAGKSIIVFVRTVHDAQRLSLILRTLGFPAVPLH---GQLTQSNRLGAL 294
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G Q+LV++D +RG+D+ V+ VVNYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 295 NKFKSGGRQILVATDVASRGLDIPMVDYVVNYDIPTHSKDYIHRVGRTARAGRSGKSITL 354
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++
Sbjct: 355 VTQYDVELLQRI 366
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 190/439 (43%), Gaps = 107/439 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I + RD+ + TGSGKT ++A+PI+Q L + A V+ PTR+LA Q+
Sbjct: 49 IQKESIPWAIEGRDIIGLAQTGSGKTAAFAIPIIQRLWQNP-QAFFACVLAPTRELAYQI 107
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F ++ +G+ + VG
Sbjct: 108 ---------------------------------------AETFESLGSVIGVRCAVIVGG 128
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP I+V TPGRL DH+ T+GF L+HL
Sbjct: 129 MDMMTQSIALAKRPH---------------------IIVCTPGRLQDHLENTKGFNLKHL 167
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + +L++ + +TFL
Sbjct: 168 KYLVMDEADRLLDLDFGPKIDQILKVIPRER-------NTFL------------------ 202
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + LH P+ + T+Y + L Y L K
Sbjct: 203 -------------FSATMTTKVAKLQRASLHKPVKVEVA-TKYSTVKTLLQYYLFFPLKH 248
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K Y+V LL L I+FT + T ++ +L + G I + G Q+ R L
Sbjct: 249 KDCYMVYLLNELAGNSTIIFTRTCSDTQKIAIMLRNLGFGAIPL---HGQLPQAKRLGAL 305
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ T
Sbjct: 306 NKFKAGARNILVATDVASRGLDIPLVDVVINYDVPQSSKDYIHRVGRTARAGRSGKSVTF 365
Query: 433 LHKDEVKRFKKLLQKADND 451
+ + +V +L+Q+ + D
Sbjct: 366 VTQYDV----ELIQRIEKD 380
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 192/438 (43%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + +E+I + RD+ + TGSGKT ++A+PI+Q L ++ + L AL++ PTR
Sbjct: 102 FKKPTEIQRESIPHAIAGRDIIGLAQTGSGKTAAFAIPILQQLL-QSPQPLFALILSPTR 160
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ F A+ +G+
Sbjct: 161 ELAFQISQQ---------------------------------------FEALGAVIGVKC 181
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
G+ VG + + L ++P I+V TPGR+M H+ T+G
Sbjct: 182 GVLVGGMDVMQQAMVLARKPH---------------------IIVGTPGRVMYHLENTKG 220
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L+ L +LV+DE DRLL ++ + +L++ N N +
Sbjct: 221 FHLKALKFLVMDEADRLLSMDFEEEINKILKVI-PKNRNTY------------------- 260
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT+T KL + L +P+ + T+Y + L
Sbjct: 261 ------------------LFSATMTSKVAKLQKASLVNPIKVQVASTKYSTVDTLVQQYC 302
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K YL +L L IVF ++ +++RL +L + G I I +G Q+
Sbjct: 303 FIPYQHKDCYLTYILNELSGNSAIVFVATCAASNRLSVMLRNLGLGAIPI---NGNMDQT 359
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R +L F+ +LV++D RG+D+ V VVNYD P K Y+HR GRTARAGQ
Sbjct: 360 KRLASLNKFKSSVKNILVATDVAARGLDIPSVGLVVNYDIPVNSKEYVHRVGRTARAGQS 419
Query: 427 GRCFTLLHKDEVKRFKKL 444
GR TL+ + +V+ ++++
Sbjct: 420 GRAITLVTQYDVEVYQRI 437
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 189/420 (45%), Gaps = 103/420 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ + TGSGKT+++ALPI+Q L + L A V+ PTR+LA Q++
Sbjct: 53 RDIIGVAETGSGKTVAFALPILQRLWEEP-KGLFACVLAPTRELAYQISQ---------- 101
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
QF+SL A+G+ + VG ++ D+ L K
Sbjct: 102 --------------QFESL---------------GSAIGVRCAVIVGGMNMVDQAVALAK 132
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
RP I+VATPGRL DH+ T+GF+L + +LV+DE DRLL
Sbjct: 133 RPH---------------------IVVATPGRLNDHLENTKGFSLRGIKFLVLDEADRLL 171
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+ + +L++ + +T+L
Sbjct: 172 DMDFGPIIDKILKVIPKER-------TTYL------------------------------ 194
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
SAT+T KL + L +P+ + + +Y L Y L K K + L+ + +L
Sbjct: 195 -FSATMTTKVAKLQRASLTNPVRVEVSK-KYTTVSTLLQYYLFIPYKQKEVNLIHMCNTL 252
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ I+FT +V RL +L G + + G QS R L F+ G +LV
Sbjct: 253 SQNSIIIFTRTVMDCQRLALILKTLGFSSVPL---HGQLSQSARLGALAKFKSGGRNILV 309
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
++D +RG+D+ V+ V+NYD P++ K YIHR GRTARAG+ G TL+ + +V+ +++
Sbjct: 310 ATDIASRGLDIPSVDAVINYDIPSHSKDYIHRVGRTARAGRAGNSITLVTQYDVELIQRI 369
>gi|407918962|gb|EKG12222.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 523
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 212/453 (46%), Gaps = 109/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCL 57
MG +++ VQ ++ I P L RD+ + TGSGKTL++ +P+V+ L + +
Sbjct: 127 MGFTTMTEVQ----KKAIPPLLAGRDVLGAAKTGSGKTLAFLIPVVEMLHSLRFKPRNGT 182
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
A+V+ PTR+LALQ IFG +A ++ + F
Sbjct: 183 GAIVISPTRELALQ------------IFG------VARELMEHHTQTF------------ 212
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
G+ +G G + A++I KLE G V++L+ATPGRL
Sbjct: 213 -----GIVMG---GANRKAEQI-------KLEKG---------------VNLLIATPGRL 242
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ T GF ++L LV+DE DR+L ++ L ++++ + ++ + +
Sbjct: 243 LDHLQNTPGFVFKNLRTLVLDEADRILEVGFEDELKAIVKILGNPDQRQTA--------- 293
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-Y 295
+ SAT T LA++ L PLF++ + +
Sbjct: 294 ---------------------------LFSATQTTKVEDLARISLKPGPLFISVDHYKEH 326
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
+ LE ++CES L+ L L+ ++K IVFTSS S L +LLN+ + +
Sbjct: 327 STADSLELGYVVCESDLRFRLLFTFLKKHQKKKIIVFTSSCASVEYLTSLLNY---IDLP 383
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
+ SG +Q R+ T F + VL+++D RG+D+ V+ V+ D P +++IH
Sbjct: 384 VLGLSGKMKQQKRTATFFEFANSQHGVLIATDVAARGLDIPAVDWVIQLDPPDDARSFIH 443
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RAGRT RAG+ GRC +L EV F + LQ+A
Sbjct: 444 RAGRTGRAGKSGRCLLVLQPSEVA-FTRHLQEA 475
>gi|56202232|dbj|BAD73664.1| putative DEAD box protein [Oryza sativa Japonica Group]
gi|56202381|dbj|BAD73793.1| putative DEAD box protein [Oryza sativa Japonica Group]
Length = 423
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 191/449 (42%), Gaps = 94/449 (20%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQVNS 74
E I L RD+ TGSGKT ++ALPI+Q L R C A V+ PTR+LA+Q+
Sbjct: 12 EVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQIAK 71
Query: 75 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 134
F A+ A+ L + +SS
Sbjct: 72 Q---------------------------------------FEALGSAISLQCSVVWWRSS 92
Query: 135 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 194
A L K +D + +E S V TPGRL+DH+ T+GF+ L Y
Sbjct: 93 RACLPEHLRK--------GFDSWQLWKERNSRV----GTPGRLLDHLTNTKGFSFNKLKY 140
Query: 195 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 254
LV+DE D LL+ +Q + +L + + TFL
Sbjct: 141 LVLDEADDLLKVDFQKAVDDILNVIPKERR-------TFL-------------------- 173
Query: 255 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 314
SAT+T+ KL + L +P+ + ++Y L + L + +K K
Sbjct: 174 -----------FSATMTEKVKKLRRACLKNPVKVEVA-SKYSLVDTLRQDLYVVPAKYKD 221
Query: 315 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
YL+ +L + +VF + EST L +L + LR K SG Q R L
Sbjct: 222 CYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LRFKAISISGQMSQDKRLGALNR 278
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
FR +LV +D +RG+D++GV+ V+NYD P K YIHR GRTARAGQ G +L++
Sbjct: 279 FRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVSLVN 338
Query: 435 KDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
+ E + FK Q + P + + I
Sbjct: 339 QFEGEFFKLTEQFLGGEEIPARKVDADEI 367
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 191/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + + L
Sbjct: 66 MGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QPFFGL 120
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F ++
Sbjct: 121 VLAPTRELAYQISKS---------------------------------------FESLGA 141
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++G+ + VG + + L K+P I+VATPGRL+DH
Sbjct: 142 SMGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGRLLDH 180
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 181 LENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL------ 227
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT++ L + L +PL ++ ++Y+
Sbjct: 228 -------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQTVST 262
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 263 LLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLH--- 319
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR GRT
Sbjct: 320 GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRT 379
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 380 ARAGKSGLAISFVAQYDVE 398
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 187/427 (43%), Gaps = 102/427 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +++I L RD+ + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA Q+
Sbjct: 88 IQEQSIPLALQGRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAAQI 146
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
A F A+ + L L +G
Sbjct: 147 TQA---------------------------------------FEALGSLISLRCALILGG 167
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P ++VATPGRL+DH+ T+GF+L +L
Sbjct: 168 LDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLRNL 206
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L+ FLP RR
Sbjct: 207 KYLVMDEADRLLDMDFGPILEKILK---------------FLPRE-------RRT----- 239
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L PL ++ ++Y+ L L
Sbjct: 240 -----------FLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVATLVQNYLFIPHMH 288
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ L + I+FT +V T R+ LL G I + + GL QS R L
Sbjct: 289 KDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL--HGGLS-QSARLGAL 345
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+ G ++
Sbjct: 346 NKFRAGSRNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISI 405
Query: 433 LHKDEVK 439
+ + +++
Sbjct: 406 VTQYDIE 412
>gi|123504635|ref|XP_001328793.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121911741|gb|EAY16570.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 515
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 207/462 (44%), Gaps = 104/462 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLP 64
F + V +TI L RD+C ++ TGSGKT ++ +P V+ L S RA+++ P
Sbjct: 36 FEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSP 95
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA Q +S+ +QF L
Sbjct: 96 TRELAAQT------------------YSVLSQIIQFTPLT-------------------- 117
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
++ L G S++ +E L++ P D LV TPGR++DHI
Sbjct: 118 ALLLTGGSSNVKEEEERLLEYP---------------------DFLVCTPGRIIDHIKNC 156
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
GFTLE++ LV+DE+DRLL+E + + + V + LP S+
Sbjct: 157 EGFTLENVLVLVLDESDRLLQEGFYSQIEEVHK---------------SLPETTQSI--- 198
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
+++AT+ ++LA++ L P+ + + +K+ + L
Sbjct: 199 --------------------LVTATMNSSVSRLAEMSLKKPVRIDLDDV-FKVAKGLTQE 237
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ C + + LVA L +K ++F ++ + H L L G + + E G
Sbjct: 238 FIRCTKETRDATLVACCSRLCTKKTLIFGNTKKIVHNLYLLFKALG---MPVAELQGDMT 294
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R + F G+ + L+++D RG+D++G+ NV+NY+ P + Y+HR GRTAR
Sbjct: 295 QLKRYEAHSLFAGGQAEFLIATDVAARGLDIKGIENVINYNMPRSLTFYVHRVGRTARIN 354
Query: 425 QLGRCFTLLHKDEVKRFKKLLQK-ADNDSCPIHSIPSSLIES 465
GR L+ +D+ + K +++K A+++ +IP ++IE+
Sbjct: 355 TEGRTIALITEDDREMMKSIIEKSAESNPVSKRTIPDNVIEA 396
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 209/456 (45%), Gaps = 112/456 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S P+Q +TI L +D+ ++ TGSGKT ++ LPI++ L + R +R
Sbjct: 200 LGFSQPTPIQA----KTIPLALNGKDILASASTGSGKTAAFLLPILERLLFRDSEYRAIR 255
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV+LPTR+LALQ C+++ +A S C
Sbjct: 256 VLVLLPTRELALQ---------CQSVLENLAQFSNITSC--------------------- 285
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ A E+ EL KRP D+++ATPGRL+
Sbjct: 286 -----LIVG---GLSNKAQEV-ELRKRP---------------------DVVIATPGRLI 315
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ G LE L L++DE DRLL ++ D N+ D+
Sbjct: 316 DHLLNAHGIGLEDLEILILDEADRLLDMGFK------------DEINKIVDS-------- 355
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C P R M+ SATL + LA+L L P+ + + +++
Sbjct: 356 --------C---------PTSRQT-MLFSATLNDEVKTLAKLSLQQPIRVQV-DALFQVA 396
Query: 299 ERLESYKLICESKL---KPLYLVAL-LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
L+ + +S+ +P L++L + I+F S + HRLC + FG +
Sbjct: 397 STLDQEFVKIKSQHLSDRPAILMSLCTRVFNTGGTIIFCRSKKEVHRLCII---FGLSDL 453
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
K E G Q R +L+ FR+GK+ L++SD +RG+D+ GV V+NY+ P + YI
Sbjct: 454 KAAELHGNLSQEQRFDSLQQFRDGKVNYLLASDVASRGLDIIGVKTVINYNMPNTLAQYI 513
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
HR GRTARAG G+ + + +++ K K+++ KA N
Sbjct: 514 HRVGRTARAGMEGKSCSFITENDRKILKEIVTKARN 549
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 191/438 (43%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ + ++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR
Sbjct: 78 YKTPTGIQAQSIPVALQGRDVIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTR 136
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ F A+ + L
Sbjct: 137 ELAAQIGQ---------------------------------------TFEALGALISLRC 157
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P ++VATPGRL+DH+ T+G
Sbjct: 158 AVIVGGLDMVPQAVALGKKPH---------------------VIVATPGRLVDHLEKTKG 196
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 197 FSLRTLKYLVLDEADRLLDMDFGESIEKLLK---------------FIPRE-------RR 234
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L P+ ++ ++Y+ L+ + +
Sbjct: 235 T----------------YLFSATMSSSVESLQRASLRDPVRVSVSASKYQTVSTLKQHYV 278
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K YL+ ++ + CIVFT +V T R LL G I + G QS
Sbjct: 279 FIPHKRKDTYLIHIINEFAGKSCIVFTRTVYETQRCAVLLRTLGFGAIPLH---GQLSQS 335
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR G ++LV++D RG+D+ V+ ++NYD P+ KTYIHR GRTARAG+
Sbjct: 336 ARLGALNKFRGGTREILVATDVAARGLDIPKVDVILNYDIPSDSKTYIHRVGRTARAGKS 395
Query: 427 GRCFTLLHKDEVKRFKKL 444
G +++ + +++ F ++
Sbjct: 396 GVAISIVTQFDIELFTRI 413
>gi|240274680|gb|EER38196.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H143]
Length = 828
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 206/436 (47%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 322 VGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 377
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
++++PTR+LA+Q C N+ A F + F L
Sbjct: 378 VVILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 409
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 410 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 437
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 438 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 482
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L+ P+ L + +
Sbjct: 483 QT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVG 519
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L +K+
Sbjct: 520 TLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLLGLKV 576
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 577 TELHGSMSQEQRIKSVEGFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 636
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR TL
Sbjct: 637 VGRTARAGRSGRACTL 652
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 197/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 22 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 80
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 81 S---------------------------------------EQFEALGASIGVKCCVIVGG 101
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L ++P I++ATPGRL+DH+ T+GF L+ +
Sbjct: 102 MDMVSQALQLARKP---------------------HIIIATPGRLVDHLENTKGFNLKAV 140
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ + TFL
Sbjct: 141 KYLVMDEADRILNLDFEVELDKILKVLPRERR-------TFL------------------ 175
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + ++Y+ E+L Y + +K
Sbjct: 176 -------------FSATMTKKVKKLERASLKDPVKVEVS-SKYQTVEKLLQYYVFIPAKF 221
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T R +L G + + G Q+ R +L
Sbjct: 222 KDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMSQNKRLASL 278
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ Q+L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 279 NKFKGKDRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRAGKAVTF 338
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 339 VTQYDVELYQRI 350
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 194/438 (44%), Gaps = 106/438 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+
Sbjct: 49 IQAEALPHALQGRDIIGVASTGSGKTAAFALPILQKLWEDP-KGLFACVIAPTRELAFQI 107
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
QF+S I A+G+ +G
Sbjct: 108 TQ------------------------QFES---------------IGSAMGVRCATIIGG 128
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
I + L K+P ++VATPGRL++H+ T+GF+L L
Sbjct: 129 VDIQSQKIALAKKP---------------------HVIVATPGRLLEHLEETKGFSLRSL 167
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L+L + +T+L
Sbjct: 168 KFLVLDEADRLLDMDFGPILDKILKLIPKER-------TTYL------------------ 202
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + ++Y L Y L+
Sbjct: 203 -------------FSATMTTKVAKLQRASLSNPVRVEV-NSKYSTVSTLLQYYLLMPLPQ 248
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++L+ L +L + I+FT +V RL +L G I + G QS R L
Sbjct: 249 KDVHLIYLANTLAQNSMIIFTRTVHDAQRLSIMLRSLGFPAIPL---HGQLSQSARLGAL 305
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 306 GKFKAGGRSILVATDVASRGLDIPSVDIVINYDIPTHSKDYIHRVGRTARAGRSGKSITL 365
Query: 433 LHKDEVK---RFKKLLQK 447
+ + +V+ R +++++K
Sbjct: 366 VTQYDVELVLRIEQVIEK 383
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 191/439 (43%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + + L
Sbjct: 70 MGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QPFFGL 124
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ + F ++
Sbjct: 125 ILAPTRELAYQISKS---------------------------------------FESLGA 145
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++G+ + VG + + L K+P I+VATPGRL+DH
Sbjct: 146 SLGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGRLLDH 184
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 185 LENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL------ 231
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT++ L + L +PL ++ ++Y+
Sbjct: 232 -------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 267 LLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR GRT
Sbjct: 324 GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRT 383
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 384 ARAGKSGLAISFVAQYDVE 402
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 206/436 (47%), Gaps = 106/436 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 319 GLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 378
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 379 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 410
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 411 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 438
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 439 DHMRNSASFTVDTLEILVLDEADRMLEDGFTDELNEIL---------------TTIPKSR 483
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L+ P+ L + +
Sbjct: 484 QT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVG 520
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L +K+
Sbjct: 521 TLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLLGLKV 577
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 578 TELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 637
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR TL
Sbjct: 638 VGRTARAGRSGRACTL 653
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 103/431 (23%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L +D+ + TGSGKT ++ LPI+Q L ++ R L AL++ PTR+LA Q++
Sbjct: 24 EAIPVALTGKDIIGLAETGSGKTAAFVLPILQALLDKPQR-LFALILTPTRELAFQIS-- 80
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
+ A+ ++G+ + +G +
Sbjct: 81 -------------------------------------EQIEALGSSIGVQCAVIIGGIDM 103
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P I++ TPGRL DH+ T+GF+L L YL
Sbjct: 104 MTQSIMLAKKP---------------------HIIIGTPGRLADHLANTKGFSLRPLKYL 142
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DR+L ++A + +L + LP RR
Sbjct: 143 VMDEADRILNMDFEAEVDKIL---------------SVLPKE-------RRT-------- 172
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
+ SAT+T+ KL + + P+ + T+Y E+L+ + +K K
Sbjct: 173 --------YLFSATMTKKVKKLQRASVQDPVKIEVS-TKYTTVEKLQQTYIFVPAKYKDC 223
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
YLV++L L +VF ++ +T R+ +L + G I + G QS R L F
Sbjct: 224 YLVSILNELAGNSFMVFCATCINTQRIGLMLRNLGFNAIPL---HGQMSQSKRLGALHKF 280
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ + +LV++D +RG+D+ V+ V+N+D P++ K YIHR GRTARAG+ GR + +
Sbjct: 281 KSKESSILVATDVASRGLDIPHVDIVINFDAPSHSKDYIHRVGRTARAGRSGRSIIFVTQ 340
Query: 436 DEVKRFKKLLQ 446
+V+ F+++ Q
Sbjct: 341 YDVELFQRIEQ 351
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 184/417 (44%), Gaps = 105/417 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 100 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 156
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 157 LAFQIS---------------------------------------EQFEALGSSIGVQCA 177
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 178 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 216
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 217 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 256
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 257 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 297
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 298 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 354
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG
Sbjct: 355 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAG 411
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 99/432 (22%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +I P L RD+ + TGSGKT ++++P++ L + R + A+++ PTR+LA Q+
Sbjct: 80 IQASSIPPALEGRDVIGLAETGSGKTGAFSIPVLNYLLEKPQRSVFAVILAPTRELAFQI 139
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ +V AA+ +G S VG
Sbjct: 140 H---------------------------------------EVVAALGSGMGASSVCVVGG 160
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+A + L + P ++VATPGRL+DH+ T+GF L +
Sbjct: 161 VDMASQAIALARNPH---------------------VVVATPGRLLDHLQNTKGFHLRQI 199
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ +P G +T
Sbjct: 200 KYLVLDEADRMLSMDFEREINEILEV---------------IPDHEGGRRT--------- 235
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
M+ SAT+T KL + L P+ + T+++ P++L L +K
Sbjct: 236 -----------MLFSATMTSKVEKLQRASLVDPVRVEV-STKFQTPKKLLQSYLFIPAKY 283
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL L+ + +VF ++ + RL +L + G I + G Q R L
Sbjct: 284 KDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAICLH---GQMSQPKRLGAL 340
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +++ +D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ +
Sbjct: 341 TKFKAGGRDIMICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRVGRTARAGRSGKAIAM 400
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++L
Sbjct: 401 VTQYDVEVYQRL 412
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 209/476 (43%), Gaps = 124/476 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G + P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 197 LGFTKPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFTIPMLERLLYREKGKKAAA 252
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R LV++PTR+LA+Q C + +A H+ E
Sbjct: 253 TRCLVLVPTRELAVQ---------CYEVGKKLAAHTDIE--------------------- 282
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
V L VG S+ + + L RP DI++ATPGR
Sbjct: 283 ---------VALIVGGLSLKSQEATLRARP---------------------DIVIATPGR 312
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DHI+ + FTL++L LV+DE DR+L + + L +
Sbjct: 313 LIDHIHNSPSFTLDNLDVLVLDEADRMLSDGFADELTEI--------------------- 351
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
I+ C P R M+ SAT+T ++L ++ L P+ L +
Sbjct: 352 -------IKAC---------PKSRQT-MLFSATMTDSVDELVRMSLDKPVRL------FV 388
Query: 297 LPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
P+R + LI E K + LVAL + + I+F S + H+L +
Sbjct: 389 DPKRSTAKGLIQEFVRVRAGREKERSPLLVALCTRTFKTRVIIFVRSKKLAHQLRIV--- 445
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
FG + +K E G Q R L+ FR+G + L+++D +RG+D++GV V+NYD P
Sbjct: 446 FGLVGLKCGELHGDLSQEQRLNALQQFRDGTVDYLMATDLASRGLDIKGVETVINYDMPG 505
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIHSIPSSLI 463
+ Y+HR GRTARAG+ GR TL+ + + K K ++ + D ++P ++
Sbjct: 506 QLAQYLHRVGRTARAGKKGRSVTLVGEGDRKMLKAAIKHSTGQDQIRHRTVPPEVV 561
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 191/438 (43%), Gaps = 104/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
FP + +++I L RD+ + TGSGKT ++ALPI+Q L ++ + L LV+ PTR
Sbjct: 79 FPT--PIQEKSIPVALQNRDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLVLAPTR 135
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ + F A+ ++ L
Sbjct: 136 ELAHQIGQS---------------------------------------FEALGSSISLRC 156
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 157 AVIVGGLDMVPQAVALGKKPH---------------------IIVATPGRLVDHLEKTKG 195
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 196 FSLRTLKYLVMDEADRLLDMDFGPAIDKLLK---------------FIPRE-------RR 233
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SATL+ L + L P+ ++ +Y+ L L
Sbjct: 234 T----------------YLFSATLSSKVESLQRASLRDPVRVSVSSNKYQTVSTLLQNLL 277
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K YL+ L+ + I+FT +V T R+ LL G I + G QS
Sbjct: 278 VIPQMRKDTYLIYLVNEFTGKSTIIFTRTVWETQRIAILLRTLGFGAIPLH---GQLSQS 334
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+
Sbjct: 335 ARLGALNKFRSGTRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKS 394
Query: 427 GRCFTLLHKDEVKRFKKL 444
G +L+ + +++ F+++
Sbjct: 395 GIAISLVTQYDIEVFQRI 412
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 207/472 (43%), Gaps = 114/472 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCL 57
+G +S P+Q AV + L RD+C + TGSGKT ++ LP ++ + +R V
Sbjct: 168 LGYASPTPIQAAV----VPLALTGRDICGRAVTGSGKTAAFMLPCLERMLHRGPKPVAAT 223
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
LV++PTR+LA+QV H + E QF S+
Sbjct: 224 HVLVLVPTRELAVQV------------------HQMTERLAQFTSV-------------- 251
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
L VG S + + L RP +++VATPGRL
Sbjct: 252 -------RAALVVGGLSANVQATSLRSRP---------------------EVVVATPGRL 283
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ T LE L LV+DE DRLL +L + ++
Sbjct: 284 IDHVRNTHSVGLEDLATLVLDEADRLLE---MGFLEEIREI------------------- 321
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---GETR 294
+R C P R M+ SATLT +LA+ + +P L+ G T
Sbjct: 322 ------VRHC---------PKRRQT-MLFSATLTSGVEELAEFSMKNPARLSADQIGTTP 365
Query: 295 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
L E + + + +K +L+A++ ++CI+F+ + + HRL ++ G +
Sbjct: 366 GTLTEEVLRLR-PGAAAMKEAHLLAIVARTFTKRCIIFSRTKQQAHRLKIIMGIHG---L 421
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
K E G Q+ R L+ FR G+ +V++D RG+D+ GV+ VV+YD P + +Y+
Sbjct: 422 KACELHGDLTQTQRLAALEEFRTGEATHMVATDVAARGLDIAGVDAVVSYDAPRTLASYL 481
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
HR GRTARAG+ G T + + + K K + ++ S+P+ ++E
Sbjct: 482 HRVGRTARAGRKGTALTFMEESDRKLIKAVSKRGSK--LVARSLPTHVVEDF 531
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 188/438 (42%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F A+ +E I L RD+ + TGSGKT ++ALPI+Q L + + LV+ PTR
Sbjct: 78 FKTPTAIQREAIPLALSGRDIIGLAETGSGKTAAFALPILQALLHDP-QPFFGLVLAPTR 136
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ F A+ + +
Sbjct: 137 ELAYQISQQ---------------------------------------FEALGSLIRVRC 157
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 158 AVIVGGMDMVPQAIALAKKPH---------------------IVVATPGRLLDHLENTKG 196
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YL++DE DRLL + L +LQ+ LP RR
Sbjct: 197 FSLRSLKYLIMDEADRLLDLDFGPILDKILQV---------------LPRE-------RR 234
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT+ + L + L +P+ ++ + Y+ L +
Sbjct: 235 TAL----------------FSATMNTKLDNLTRAALRNPVRVSISTSSYQTVANLLQQYI 278
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K +YL+ LL + CI+FT +V T RL LL L G QS
Sbjct: 279 FIPHKHKDVYLIHLLTEFSGQTCILFTRTVTETQRLAFLLR---ALNFSAIPLHGQLPQS 335
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+
Sbjct: 336 ARLGALNKFRSGSRSILVATDVAARGLDIPSVDLVINFDLPPDSKTYVHRVGRTARAGKS 395
Query: 427 GRCFTLLHKDEVKRFKKL 444
G +++ + +V+ F+++
Sbjct: 396 GVAVSVVTQYDVEVFQRI 413
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 188/421 (44%), Gaps = 103/421 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E+I L +D+ + TGSGKT ++A+PI+Q L + A +LV+ PTR+LA Q+
Sbjct: 99 IQAESIPHALAGKDIIGLAQTGSGKTAAFAIPILQALWH-AKTPYFSLVLAPTRELAFQI 157
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
K+ F A+ ++GL VG
Sbjct: 158 ---------------------------------------KETFDALGSSMGLRSVCIVGG 178
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ D+ +L+++P ++VATPGR+ DH+ T+GF+L++L
Sbjct: 179 MDMMDQARDLMRKPH---------------------VIVATPGRITDHLEHTKGFSLKNL 217
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L++ +P VER
Sbjct: 218 KYLVMDEADRLLDMDFGPALDKILKV---------------IP-------------VER- 248
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T KL + L +P+ + +Y+ + L ++
Sbjct: 249 ---------TSYLFSATMTNKIAKLQRASLKNPVRVAVS-NKYQTADNLVQSMMLVSDGY 298
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +LV LL + IVFT +V ++ R L G + + +G Q+ R L
Sbjct: 299 KNTFLVHLLNEFMGKSIIVFTRTVANSERTAILTRLLGFSSVPL---NGQLSQTQRLGAL 355
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +L+++D RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ +L
Sbjct: 356 NKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISL 415
Query: 433 L 433
+
Sbjct: 416 V 416
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 195/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 83 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 141
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 142 S---------------------------------------EQFEALGASIGIKCCVIVGG 162
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L ++P I++ATPGRL+DH+ T+GF L+ +
Sbjct: 163 MDMVSQALHLARKPH---------------------IIIATPGRLVDHLENTKGFNLKAV 201
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ + TFL
Sbjct: 202 KYLVMDEADRILNLDFEVELEKILKVIPRERR-------TFL------------------ 236
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + ++Y+ E+L Y + +K
Sbjct: 237 -------------FSATMTKKVKKLERASLKDPVKVEVS-SKYQTVEKLLQYYIFIPAKY 282
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T R +L G + + G Q+ R L
Sbjct: 283 KDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMSQNKRLAAL 339
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ Q+L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 340 NKFKGKNRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRAGKAVTF 399
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 400 VTQYDVELYQRI 411
>gi|115454521|ref|NP_001050861.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|75327677|sp|Q7Y183.1|RH10_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|31126733|gb|AAP44655.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53370642|gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa
Japonica Group]
gi|108710302|gb|ABF98097.1| ATP-dependent RNA helicase DDX47, putative, expressed [Oryza sativa
Japonica Group]
gi|113549332|dbj|BAF12775.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|125545183|gb|EAY91322.1| hypothetical protein OsI_12939 [Oryza sativa Indica Group]
gi|215695397|dbj|BAG90588.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 190/456 (41%), Gaps = 104/456 (22%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 71
+ E I L RDL TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q
Sbjct: 67 IQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQ 126
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ F A+ A+GLS + VG
Sbjct: 127 IGQQ---------------------------------------FEALGSAIGLSCTVLVG 147
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L KRP I+V TPGRL+DH+ T+GF+L
Sbjct: 148 GVDRVQQAVSLAKRPH---------------------IVVGTPGRLLDHLTDTKGFSLNK 186
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE D+LL +Q L +L + + TFL
Sbjct: 187 LKYLVLDEADKLLNVEFQKALDDILNVIPKERR-------TFL----------------- 222
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
SAT+T +KL + L +P+ + ++Y + L +
Sbjct: 223 --------------FSATMTNKVSKLQRACLRNPVKVEVA-SKYSTVDTLRQEFYFVPAD 267
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K +LV +L L ++F + EST L L + LR K SG Q R
Sbjct: 268 YKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRN---LRFKAISISGQMSQDKRLGA 324
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG G +
Sbjct: 325 LNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVS 384
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
L+++ E F K+++K P + ++ I LR
Sbjct: 385 LVNQYEAMWF-KMIEKLLGYEIPDRKVDNAEIMILR 419
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 198/444 (44%), Gaps = 108/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGIS +QV+ E + RD ++ TGSGKT ++ALPI+Q LS AL
Sbjct: 21 MGISKPTEIQVSCIPEILSG----RDCIGSAKTGSGKTAAFALPIIQKLSEDPYGIF-AL 75
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA+Q+ D F A+
Sbjct: 76 ILTPTRELAIQI---------------------------------------ADQFKALGK 96
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++GL+ + +G + + EL +P +++ATPGRL H
Sbjct: 97 SIGLNDAVIIGGLDMVKQGMELSNQPH---------------------VVIATPGRLASH 135
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I + F+L + +LV+DE DRLL ++++ L + F +
Sbjct: 136 ITSGTKFSLNKIKFLVLDEADRLLEKSFENDLEVI----------------------FDN 173
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ R+ ++ SAT+T N L ++ H+P F ++ +
Sbjct: 174 IAKKRQT----------------LLFSATITDAINHLKEV-AHNP-FCYEVKSDFATVTE 215
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ L+ S++K YLV LLQ+ E+ I+FT + S + +L ++ K
Sbjct: 216 LDQRYLLIPSQVKDCYLVHLLQNFSEKSVIIFTQTCRSCQVISFMLR---KVEFKCAGLH 272
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
+ Q R +L FR G +++LV++D +RG+D+ V V+NY+ PA K Y+HR GRT
Sbjct: 273 SVMSQRERLSSLGRFRSGHVKILVATDVASRGLDIPLVQLVINYNVPASPKDYVHRVGRT 332
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G TLL + ++ R K +
Sbjct: 333 ARAGRGGMSLTLLTQFDIDRLKAI 356
>gi|157376496|ref|YP_001475096.1| DEAD/DEAH box helicase [Shewanella sediminis HAW-EB3]
gi|157318870|gb|ABV37968.1| DEAD/DEAH box helicase domain protein [Shewanella sediminis
HAW-EB3]
Length = 419
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 198/449 (44%), Gaps = 120/449 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS---------- 50
+G SS P+Q I L +D+ + TG+GKT ++ALPI+Q LS
Sbjct: 19 LGYSSPTPIQA----HAIPVILAGQDIMAGAQTGTGKTAAFALPILQKLSECDVELSDTK 74
Query: 51 -NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 109
+++ +RALV+ PTR+LALQVN +
Sbjct: 75 QTVSLKPVRALVLTPTRELALQVNQS---------------------------------- 100
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
FA GL+ + G G+ D + L++ VDI
Sbjct: 101 -----FAKYGKDSGLNTAIVYG-------------------GVSIDAQ--ADALKAGVDI 134
Query: 170 LVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
LVATPGRL+DH+ RG TL+ L +LV DE DR+L ++ + +L+ S +
Sbjct: 135 LVATPGRLLDHLR--RGSLTLKQLNFLVFDEADRMLDMGFKDEINAILKQVPSKRQTLLF 192
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
A TF PS F LS L QDP KL ++D + L
Sbjct: 193 SA-TFDPSVFA--------------------------LSKRLQQDP-KLIEVDKRNTLAA 224
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
+ Y + +S +LIC L++S ++ ++F+ + + +
Sbjct: 225 KVEQVVYAVDADRKS-ELICH----------LVKSKLWQQVLIFSRKKQGADNIAAKMVK 273
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G IK + + G Q+VR K L+ F++G+IQVLV++D RG+DVE + VVNY+ P
Sbjct: 274 AG---IKAQAFHGDLSQAVREKALQQFKQGEIQVLVATDVAARGLDVEELKVVVNYELPF 330
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
+ YIHR GRT RAG G TL +++
Sbjct: 331 IAEDYIHRIGRTGRAGNAGLAITLYSEED 359
>gi|392578431|gb|EIW71559.1| hypothetical protein TREMEDRAFT_27480 [Tremella mesenterica DSM
1558]
Length = 786
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 197/449 (43%), Gaps = 103/449 (22%)
Query: 22 LFERDLCINSPTGSGKTLSYALPIVQTLS----NRAVRCLRALVVLPTRDLALQVNSARC 77
L RD+ ++ TGSGKT ++ +PI++ L+ R + R L++ PTR+LA+Q
Sbjct: 241 LLGRDILGSAVTGSGKTAAFMVPILERLTYRERGRGGQACRVLILCPTRELAVQ------ 294
Query: 78 KYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIAD 137
C +F L + GL++ A+
Sbjct: 295 -------------------CEEFGKKL--------------STQGGLNIRFAL------- 314
Query: 138 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 197
L G+ + + Q L++ DIL+ATPGRL+DH+ T FTL L LV+
Sbjct: 315 ----------LVGGLSLNAQ--AQNLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVI 362
Query: 198 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 257
DE DR+L + L + +R C P
Sbjct: 363 DEADRMLEAGFTDELNEI----------------------------VRSC---------P 385
Query: 258 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYL 317
R M+ SAT+T ++L +L L P+ L R + + I + L
Sbjct: 386 RGRQT-MLFSATMTDSVDELVKLSLDKPIRLFVDPKRNTAIGLTQEFVRIKSDDTRSPSL 444
Query: 318 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFRE 377
+AL + E+CI+F S H++ + FG +K E G Q R L+ F+
Sbjct: 445 LALCKRTVRERCIIFFRSKALAHQMRVV---FGLCGLKAAELHGNLSQEQRLHALEEFKL 501
Query: 378 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
GK+ L+++D +RG+D++GV V+NYD P + Y HR GRTARAG+ GR TL+ + +
Sbjct: 502 GKVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTARAGRKGRSITLVGEAD 561
Query: 438 VKRFKKLLQKADNDSCPIHSIPSSLIESL 466
K K ++++++ D IPS + ++
Sbjct: 562 RKLLKAVIKQSEADEIRHRIIPSEAVTAM 590
>gi|125559478|gb|EAZ05014.1| hypothetical protein OsI_27195 [Oryza sativa Indica Group]
Length = 414
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 188/452 (41%), Gaps = 103/452 (22%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQ 71
+ E I L RD+ TGSGKT ++ALPI+Q L R A V+ PTR+LA+Q
Sbjct: 9 IQAEAIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPRFLACVLAPTRELAIQ 68
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ F A+ A+ L + +G
Sbjct: 69 IAKQ---------------------------------------FEALGSAISLQCSVLIG 89
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L KRP ++V TPGRL+DH+ T+GF+
Sbjct: 90 GIPRTSQTISLAKRPH---------------------VVVGTPGRLLDHLTNTKGFSFNK 128
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE D LL+ +Q + +L + + TFL
Sbjct: 129 LKYLVLDEADDLLKVDFQKAVDDILNVIPKERR-------TFL----------------- 164
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
SAT+T+ KL + L +P+ + ++Y L + L + +K
Sbjct: 165 --------------FSATMTEKVKKLRRACLKNPVKVEVA-SKYSLVDTLRQDLYVVPAK 209
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YL+ +L + +VF + EST L +L + LR K SG Q R
Sbjct: 210 YKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LRFKAISISGQMSQDKRLGA 266
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR +LV +D +RG+D++GV+ V+NYD P K YIHR GRTARAGQ G +
Sbjct: 267 LNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVS 326
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
L+++ E + FK Q + P + + I
Sbjct: 327 LVNQFEGEFFKLTEQFLGGEEIPARKVDADEI 358
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 194/438 (44%), Gaps = 106/438 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E + L RD+ + TGSGKT ++ALPI+Q L R L A V+ PTR+LA Q+
Sbjct: 40 IQREALPHALEGRDIIGVASTGSGKTAAFALPILQKLWEEP-RGLFACVLAPTRELAYQI 98
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ A+G+ + VG
Sbjct: 99 SQQ---------------------------------------FEALGSAMGVRCAVLVGG 119
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ D+ L K+P I+VATPGRL H+ T+GF+L L
Sbjct: 120 MDLIDQAVALAKKPH---------------------IIVATPGRLQQHLTETKGFSLRGL 158
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + + +L++ + +T+L
Sbjct: 159 KFLVLDEADRLLDLDFGPVIDQILKIIPKER-------TTYL------------------ 193
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + ++Y+ L Y L
Sbjct: 194 -------------FSATMTTKVAKLQRASLSNPIRVEVS-SKYQTVSTLLQYYLFIPLSQ 239
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++L+ L SL I+FT +V RL +L G + + G QS R L
Sbjct: 240 KDVHLIYLANSLASNSIIIFTRTVHDAQRLSIMLRILGFPAVPLH---GQLSQSARLGAL 296
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +VLV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 297 AKFKSGGRKVLVATDVASRGLDIPSVDIVINFDIPNHSKDYIHRVGRTARAGRSGKSITL 356
Query: 433 LHKDEV---KRFKKLLQK 447
+ + +V +R +++++K
Sbjct: 357 VTQYDVELIQRIEEVIEK 374
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 183/429 (42%), Gaps = 119/429 (27%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ E I P L RD+ +PTGSGKT+++ALPI+ L + ALV+ PTR+
Sbjct: 30 PTQIQA--ECIPPALSGRDIIGIAPTGSGKTIAFALPILHRLWDNPQSNF-ALVLSPTRE 86
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL-SV 126
LA Q+++ F A+ A+G+ SV
Sbjct: 87 LAYQISAQ---------------------------------------FEALGAAMGVRSV 107
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ G+ + L K+P I+VATPGRL DH+N+T+G
Sbjct: 108 VIVGGEEDRVQQAVRLAKKPH---------------------IIVATPGRLHDHLNSTKG 146
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRL +P + ST+L
Sbjct: 147 FSLRQLKHLVLDEADRL-------AIP--------------RERSTYL------------ 173
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T + KL + L P+ + +YK L Y +
Sbjct: 174 -------------------FSATMTANVTKLQRASLTDPVRVDVSSFKYKTVPSLLQYYV 214
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+C K + LV L+ S+ + IVF +V RL +L L + G QS
Sbjct: 215 LCPLVNKEVMLVYLINSMAQNTIIVFVRTVADAKRLSIVLR---TLEFQAVPLHGELSQS 271
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R F+ GK +LV++D +RG+DV V+ V+NYD P K Y+HR GRTARAG+
Sbjct: 272 QRLGAFNRFKSGKSNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRA 331
Query: 427 GRCFTLLHK 435
G+ ++ +
Sbjct: 332 GKSILMVSQ 340
>gi|452823641|gb|EME30650.1| ATP-dependent RNA helicase DEAD [Galdieria sulphuraria]
Length = 558
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 211/465 (45%), Gaps = 109/465 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLP 64
+ V + + I L RD+C ++ TGSGKT ++A+PI++ L S V +R +V+LP
Sbjct: 119 WEVPTPIQDKVIPLALVGRDICASAVTGSGKTGAFAVPILEKLWRSASKVSLVRVIVILP 178
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LALQ CK +F ++ K++ I A+G
Sbjct: 179 TRELALQ---------CKQVFTELS----------------------KNMDIDIELAIG- 206
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
GLAV R + +A LQ DI++ TPGR++DHI T
Sbjct: 207 --GLAV--------------RAEQDA------------LQRCPDIVIGTPGRIIDHIRNT 238
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+GF+++ + +V+DE DRLL + L + I
Sbjct: 239 KGFSVDDVEIVVLDEADRLLDLGFSEELEEI----------------------------I 270
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE-S 303
R C P+ ++ SAT+T +LA L L P + + Y++ + LE
Sbjct: 271 RSCS----------PKRQTLLFSATMTTSVQQLALLSLKEPANIVV-DPLYEVSKTLEQE 319
Query: 304 YKLICESK---LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
+ LI + + YL+AL ++ I+F S H++ + FG L + E
Sbjct: 320 FVLISDGNNVNKRISYLLALCCRTYTQRVILFFSKRSVAHQIFII---FGMLGLSAVELH 376
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R + L FR+G+ + L+ +D +RG+D+ V V+NY+ P I+TY+HR GRT
Sbjct: 377 GNLSQMQRMEALNRFRKGQCEFLLCTDVASRGLDIFDVRTVINYEMPNDIRTYVHRVGRT 436
Query: 421 ARAGQLGRCFTLLHK-DEVKRFKKLLQKADNDSCPIHSIPSSLIE 464
ARAG G+ TL+ + +R ++QK + SI S+++
Sbjct: 437 ARAGAKGKAVTLVDETSHARRLLSVIQKRSKTTLKSRSITDSVLD 481
>gi|260798638|ref|XP_002594307.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
gi|229279540|gb|EEN50318.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
Length = 563
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 206/461 (44%), Gaps = 115/461 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPT 65
P+Q A TI L +D+C + TG+GKT ++ LP+++ L R R LV+ PT
Sbjct: 21 PIQKA----TIPVALLGKDVCACAATGTGKTAAFMLPVLERLLYKPRQAPVTRVLVLAPT 76
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+LA+QV H ++ QF S+
Sbjct: 77 RELAVQV------------------HQVSRQLAQFTSV---------------------E 97
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
+ LA G I + EA + P D+++ATPGRL+DH++ T
Sbjct: 98 ISLAAGGLDIRTQ----------EAALRLGP-----------DVVIATPGRLIDHLHNTP 136
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
F L+ + L++DE DR+L E ++ + +++L
Sbjct: 137 SFDLKSIEVLILDEADRMLDEFFEEQMNEIIRL--------------------------- 169
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-TRYKLPERLESY 304
C +R M+ SAT++ LA + L +P+ L E T R E
Sbjct: 170 -CARKRQ----------TMLFSATMSDQVKDLAAVSLENPVKLFVNENTDVAFNLRQEFI 218
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
++ + ++A + CIVF + HR+ +L G L + + E G
Sbjct: 219 RIRPNREGDREAIIAA--RTFHDHCIVFIQTKLQAHRMHIIL---GLLGLNVGELHGNLS 273
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q+ R +TLK F++ ++ VL+++D RG+D++GV V+N+ P+ +K YIHR GRTARAG
Sbjct: 274 QTQRLETLKRFKDAEVDVLLATDLAARGLDIQGVKTVINFTMPSTLKHYIHRVGRTARAG 333
Query: 425 QLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 463
+ GR TL+ + E + K +++ A N P+ S +P +I
Sbjct: 334 KSGRAVTLVGEKERRYLKDVVKNARN---PVKSRVVPQEVI 371
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 190/426 (44%), Gaps = 106/426 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ + TGSGKT ++ALPI+Q L + + L A V+ PTR+LA Q++
Sbjct: 52 RDIIGVASTGSGKTAAFALPILQKLWDDP-KGLFACVLAPTRELAYQISQQ--------- 101
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
F A+ A+G+ + VG + I + L K
Sbjct: 102 ------------------------------FEALGSAMGVRCAVIVGGTDIMAQKVALAK 131
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
RP I+VATPGRL DH+ T+GF L + +LV+DE DRLL
Sbjct: 132 RPH---------------------IVVATPGRLDDHLEKTKGFNLRGIKFLVLDEADRLL 170
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+ + +L++ + +T+L
Sbjct: 171 DMDFGPVIDKILKVIPKER-------TTYL------------------------------ 193
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
SAT+T KL + L +P+ + T+Y+ + L Y L+ K K LV L +L
Sbjct: 194 -FSATMTTKVAKLQRASLSNPVRVEV-NTKYQTVDSLLQYYLLMPLKEKDTLLVYLANTL 251
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ I+FT +V RL +L G + + G QS R L F+ G +VLV
Sbjct: 252 AQNSIIIFTRTVNDAARLSIILRTLGFPAVPL---HGQLSQSQRLGALSKFKSGGRKVLV 308
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RF 441
++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T + + +V+ R
Sbjct: 309 ATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRAGKSITFVTQYDVEFIMRI 368
Query: 442 KKLLQK 447
+K++ K
Sbjct: 369 EKVIGK 374
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 193/444 (43%), Gaps = 106/444 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q+L ++ + L L
Sbjct: 74 LGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQSLLDKP-QPLFGL 128
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ + F A+
Sbjct: 129 VLAPTRELAYQISQS---------------------------------------FEALGS 149
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 150 IIRVKCAVIVGGMDMVPQAIALGKKPH---------------------IIVATPGRLLDH 188
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 189 LENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 230
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL ++ +Y+
Sbjct: 231 ----RRT----------------YLFSATISSKVESLQRASLKDPLRVSISSNKYQTVST 270
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K YL+ LL + I+FT +V T R+ LL G I +
Sbjct: 271 LIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLH--- 327
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR GRT
Sbjct: 328 GQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGRT 387
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G + + + +V+ + ++
Sbjct: 388 ARAGKSGHAISFVTQYDVEIWMRI 411
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 197/444 (44%), Gaps = 106/444 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + E I L +D+ + TGSGKT ++A+PI+Q+L + + LV+ PTR
Sbjct: 85 FTKPTPIQAEAIPHALEGKDVIGLAVTGSGKTAAFAIPILQSLWHDQLPYY-CLVLSPTR 143
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ KD F A+ +GL
Sbjct: 144 ELAYQI---------------------------------------KDTFDALGSGMGLRA 164
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG + D+ +L+++P ++VATPGR++DH+ T+G
Sbjct: 165 CCIVGGMDMMDQARDLMRKPH---------------------VIVATPGRIVDHLEHTKG 203
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L++L YLV+DE DRLL + L +L++ + +T+L
Sbjct: 204 FSLKNLKYLVMDEADRLLDLDFGPELDKILRVIPRER-------NTYL------------ 244
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T KL + L++P+ + ++Y+ + L +
Sbjct: 245 -------------------FSATMTNKIEKLQRASLNNPVRIAVS-SKYQTADNLVQSMM 284
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K YLV LL + I+FT + + R L G + + G QS
Sbjct: 285 LVSDGYKNTYLVHLLNEFVGKSIIIFTRTCAHSQRTALLARILGFSAVPLH---GQLSQS 341
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R +L F+ GK +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG+
Sbjct: 342 QRLGSLNKFKSGKANILVATDVAARGLDIPAVDVVINYDIPTDSKAYIHRVGRTARAGRS 401
Query: 427 GRCFTLLHKDEVK---RFKKLLQK 447
G+ +L+ + +++ R + +LQK
Sbjct: 402 GKSISLVTQYDLEMYLRIEAVLQK 425
>gi|388578792|gb|EIM19128.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 438
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 194/438 (44%), Gaps = 104/438 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ Q++I L RD+ + TGSGKT ++ALP++Q L + V+ PTR+LA Q+
Sbjct: 30 IQQQSIPYSLQSRDIIGLAQTGSGKTAAFALPVIQLLYDNPAPYF-CCVLAPTRELAYQI 88
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +GL VG
Sbjct: 89 S---------------------------------------EQFEALGSNIGLRTATIVGG 109
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL DH+ T+GF+L ++
Sbjct: 110 MDMMTQSIALSKKPH---------------------IIVATPGRLHDHLENTKGFSLRNI 148
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + + +L++ LP ER
Sbjct: 149 KFLVMDEADRLLDMDFGPIIDKLLKI---------------LPK-------------ER- 179
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
M+ SAT+T KL + L +P+ + + +Y+ L + L K+
Sbjct: 180 ---------TTMLFSATMTTKVAKLQRASLSNPVKVEVSD-KYQTVSTLLQHYLFFPFKM 229
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV L + I+FT +V R+ +L + G I + G QS R L
Sbjct: 230 KDSYLVYLANEVAGHSMIIFTRTVVDAQRISIILRNLGFPAIPLH---GQLSQSSRLGAL 286
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ VVNYD P+ K YIHR GRTARAG+ G+ TL
Sbjct: 287 NKFKAGGRNILVATDVASRGLDIPSVDYVVNYDTPSNSKDYIHRVGRTARAGRSGKAITL 346
Query: 433 LHKDEVKRFKKLLQKADN 450
+ + +V+ ++ ++KA N
Sbjct: 347 VTQYDVELLQR-IEKAIN 363
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L R ALV+ PTR+LA Q+
Sbjct: 81 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-ALVLTPTRELAFQI 139
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 140 G---------------------------------------EQFEALGSGIGIKCCVVVGG 160
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 161 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 199
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 200 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 232
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 233 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 280
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 281 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 337
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ GR T+
Sbjct: 338 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGRAITM 397
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 398 VSQYDIELYQRI 409
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 197/434 (45%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q+
Sbjct: 45 IQKEAIPVALQGKDIIGLAETGSGKTGAFAIPILQALLENPQRYF-ALILTPTRELAFQI 103
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ A+ ++G+ + VG
Sbjct: 104 SEQ---------------------------------------IEALGSSIGVKCAVIVGG 124
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF+L +L
Sbjct: 125 MDMMAQSLMLAKKPH---------------------IIIATPGRLVDHLENTKGFSLRNL 163
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 164 KVLVMDEADRILNMDFEEEVDKILKVI--PRERR-----TFL------------------ 198
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + T+++ E+L+ Y + K
Sbjct: 199 -------------FSATMTKKVQKLHRASLVDPVRVEVS-TKFQTVEQLQQYYIFIPVKY 244
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L + +VF ++ T R+ LL + G I + G Q+ R +L
Sbjct: 245 KDVYLVHILNEMAGNSFMVFMATCNGTVRVALLLRNLGLDAIPL---HGQMTQNKRLASL 301
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 302 NKFKSKSRSILISTDVSSRGLDIPHVDVVINFDMPTHSKDYIHRVGRTARAGRSGKAITL 361
Query: 433 LHKDEVKRFKKLLQ 446
+ + +++ ++++ Q
Sbjct: 362 VTQYDIELYQRIEQ 375
>gi|154282923|ref|XP_001542257.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
gi|150410437|gb|EDN05825.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
Length = 1466
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 210/450 (46%), Gaps = 109/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 323 VGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 378
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 379 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 410
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 411 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 438
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 439 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 483
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L P+ L + +
Sbjct: 484 QT-----------------------MLFSATMTNNVDKLIRVGLSRPVRLMVDAKKQTVG 520
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L +K+
Sbjct: 521 TLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLLGLKV 577
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P Y+HR
Sbjct: 578 TELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHAIYLHR 637
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
GRTARAG+ GR TL + + K K ++
Sbjct: 638 VGRTARAGRSGRACTLAAEPDRKVVKAAVK 667
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 187/439 (42%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + + L
Sbjct: 70 MGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QSFFGL 124
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ + F ++
Sbjct: 125 ILAPTRELAFQISKS---------------------------------------FESLGS 145
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 146 TINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDH 184
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 185 LENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL------ 231
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT++ L + L +PL ++ +Y+
Sbjct: 232 -------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 267 LLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPLH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR GRT
Sbjct: 324 GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRT 383
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 384 ARAGKSGVAISFVTQYDVE 402
>gi|417412705|gb|JAA52724.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 788
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 207/473 (43%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
M P+Q A I GL +D+C + TG+GKT ++ALPI++ L R R
Sbjct: 228 MNFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPILERLIYKPRQAPVTR 283
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 284 VLVLVPTRELGIQV------------------HSVVKQLAQFCSI-------------TT 312
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
AVG GL V A L++ DIL+ATPGRL+
Sbjct: 313 CLAVG---GLDVKSQEAA--------------------------LRAVPDILIATPGRLI 343
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 344 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 380
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 381 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 425
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 426 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG---LQV 482
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+ GV V+N+ P IK Y+HR
Sbjct: 483 GELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIAGVKTVINFTMPNTIKHYVHR 542
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 543 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 592
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 205/458 (44%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++I P L +D+ + TGSGKT ++A+PI+ +L + + A ++ PTR+LA
Sbjct: 93 IQSKSIPPALNGKDIIGLAQTGSGKTAAFAIPILNSLWHDQL-PYYACILSPTRELA--- 148
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 149 ------------------------------------QQIKETFDSLGSLMGVRTVCIVGG 172
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ TRGF+L L
Sbjct: 173 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTRGFSLRKL 211
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L++ ++ +T+L
Sbjct: 212 RYLVMDEADRLLDMEFGPVLDRILKILPTEGR------TTYL------------------ 247
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 248 -------------FSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 293
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +L+ LL + I+FT + + R+ L N L G Q+ R+ L
Sbjct: 294 KNTFLIYLLNEFHGKTFIIFTRTKANAERIAGLANL---LEFNATALHGDLNQNQRTGAL 350
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 351 DLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISL 410
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ +I SLR
Sbjct: 411 VSQYDLELILRIEEVLGK----KLPKESVDKDIILSLR 444
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 187/439 (42%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + + L
Sbjct: 70 MGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QSFFGL 124
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ + F ++
Sbjct: 125 ILAPTRELAFQISKS---------------------------------------FESLGS 145
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 146 TINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDH 184
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 185 LENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL------ 231
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT++ L + L +PL ++ +Y+
Sbjct: 232 -------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 267 LLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR GRT
Sbjct: 324 GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRT 383
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 384 ARAGKSGVAISFVTQYDVE 402
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 107/434 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 70
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q+ F A+ +GL + V
Sbjct: 127 QIGQQ---------------------------------------FEALGSGIGLIAAVIV 147
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 148 GGVDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLK 186
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 187 ALKFLIMDEADRILNMDFEVELDKILKVIPRERR-------TYL---------------- 223
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T+ +KL + L P ++ +RYK + L+ + + +
Sbjct: 224 ---------------FSATMTKKVSKLERASLRDPARVSVS-SRYKTVDNLKQHYIFVPN 267
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K K YLV LL IVF ++ +T ++ +L G + + G Q R
Sbjct: 268 KYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPL---HGQMSQEKRLG 324
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
+L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G
Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAI 384
Query: 431 TLLHKDEVKRFKKL 444
T++ + +V+ ++K+
Sbjct: 385 TVVTQYDVEAYQKI 398
>gi|357617988|gb|EHJ71096.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 776
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 199/446 (44%), Gaps = 112/446 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTR 66
P+Q A TI L +D+C + TG+GKT +Y +P+++ L + R R LV++PTR
Sbjct: 192 PIQAA----TIPIALLGKDICACAATGTGKTAAYMVPVLERLLYKPTERRTRVLVLVPTR 247
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+L QV H++ QF S+ ++
Sbjct: 248 ELGAQV------------------HTVTRQLAQFTSV---------------------TI 268
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
GL+VG + + S L + P D+++ATPGRL+DH+ T
Sbjct: 269 GLSVGGLDVKYQESVLRRHP---------------------DVVIATPGRLIDHVRNTPS 307
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L + L++DE DR+L E + + + IR+
Sbjct: 308 FDLNSIEVLILDEADRMLDEYFAEQMKEI----------------------------IRQ 339
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTG-ETRYKLPERLES 303
C P+ M+ SAT++ LA + L P LFL + + + L R E
Sbjct: 340 CS----------PKRQTMLFSATMSDQVRDLAAVSLKKPVKLFLDSNKDVAFNL--RQEF 387
Query: 304 YKLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
++ E + + L AL+ +++ ++F + + HRL L G IK+ E G
Sbjct: 388 VRIRKERECDREAILAALVCRTFKDRAVIFVQTKKQAHRLHVALGLLG---IKVAELHGA 444
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R +LK FRE ++ VLV++D RG+D+ GV V+N+ PA I+ YIHR GRTAR
Sbjct: 445 LNQPQRLDSLKRFREEQVDVLVATDVAARGLDIPGVKTVLNFTLPATIEHYIHRVGRTAR 504
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKA 448
AG+ G +L + E K ++++A
Sbjct: 505 AGRAGVSVSLAGEGERNLVKTIVRRA 530
>gi|125587400|gb|EAZ28064.1| hypothetical protein OsJ_12029 [Oryza sativa Japonica Group]
Length = 472
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 189/456 (41%), Gaps = 104/456 (22%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 71
+ E I L RDL TGSGKT ++ LPI+Q L + L A V+ PTR+LA Q
Sbjct: 67 IQAEAIPHALEGRDLIGLGQTGSGKTGAFGLPIIQALLKQDKPQALFACVLSPTRELAFQ 126
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ F A+ A+GLS + VG
Sbjct: 127 IGQQ---------------------------------------FEALGSAIGLSCTVLVG 147
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L KRP I+V TPGRL+DH+ T+GF+L
Sbjct: 148 GVDRVQQAVSLAKRPH---------------------IVVGTPGRLLDHLTDTKGFSLNK 186
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE D+LL +Q L +L + + TFL
Sbjct: 187 LKYLVLDEADKLLNVEFQKALDDILNVIPKERR-------TFL----------------- 222
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
SAT+T +KL + L +P+ + ++Y + L +
Sbjct: 223 --------------FSATMTNKVSKLQRACLRNPVKVEVA-SKYSTVDTLRQEFYFVPAD 267
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K +LV +L L ++F + EST L L + LR K SG Q R
Sbjct: 268 YKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRN---LRFKAISISGQMSQDKRLGA 324
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG G +
Sbjct: 325 LNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVS 384
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
L+++ E F K+++K P + ++ I LR
Sbjct: 385 LVNQYEAMWF-KMIEKLLGYEIPDRKVDNAEIMILR 419
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 195/437 (44%), Gaps = 101/437 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P Q+ +I P L RD+ + TGSGKT S+A+PI+ L + + + A+++ PTR+
Sbjct: 62 PTQIQA--ASIPPALEGRDVIGLAETGSGKTGSFAIPILNYLLEKPQKQVFAVILAPTRE 119
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ +V A+ +G +
Sbjct: 120 LAFQIH---------------------------------------EVMVALGRGMGANSV 140
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
VG +A + L + P ++VATPGRL+DH+ T+GF
Sbjct: 141 CVVGGVDMASQAIALARNPH---------------------VVVATPGRLLDHLQNTKGF 179
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L + YLV+DE DR+L ++ + +L++ I C
Sbjct: 180 HLRQIKYLVMDEADRMLSMDFEKEINEILEV-------------------------IPDC 214
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
E+G + M+ SAT+T KL + L P+ + T+++ P++L L
Sbjct: 215 --EKGRR--------TMLFSATMTSKVEKLQRASLVDPVRVEV-STKFQTPKKLLQNYLF 263
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
+K K YL L+ + +VF ++ + RL +L + G I + G Q
Sbjct: 264 IPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAICLH---GQMSQPK 320
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L F+ G +L+ +D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 321 RLGALTKFKSGGRDILICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRVGRTARAGRSG 380
Query: 428 RCFTLLHKDEVKRFKKL 444
+ ++ + +V+ +++L
Sbjct: 381 KAIAMVTQYDVEVYQRL 397
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 192/444 (43%), Gaps = 106/444 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L ++ + L L
Sbjct: 78 LGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALLDKP-QPLFGL 132
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ F A+
Sbjct: 133 VLAPTRELAYQISQQ---------------------------------------FEALGS 153
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 154 VIRVKCAVIVGGMDMVPQSIALGKKPH---------------------IIVATPGRLLDH 192
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 193 LENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPRE--- 234
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL ++ +Y+
Sbjct: 235 ----RRT----------------YLFSATISSKVESLQRASLKDPLRVSISSNKYQTVST 274
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K YL+ LL + I+FT +V T R+ LL G I +
Sbjct: 275 LIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLH--- 331
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR GRT
Sbjct: 332 GQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGRT 391
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G +++ + +++ F ++
Sbjct: 392 ARAGKSGHAISVVTQYDLEIFMRI 415
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 97 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRFF-ALVLTPTRELAFQI 155
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
F A+ ++G+ + VG
Sbjct: 156 GEQ---------------------------------------FEALGSSIGIKCCVVVGG 176
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 177 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKSI 215
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 216 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 248
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ Y L K
Sbjct: 249 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQYYLFIPVKY 296
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 297 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 353
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 354 NKFKAKDRSILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRSGKAITL 413
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 414 VSQYDIELYQRI 425
>gi|148235819|ref|NP_001089455.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Xenopus laevis]
gi|66910710|gb|AAH97561.1| MGC114699 protein [Xenopus laevis]
Length = 758
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 210/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
M + P+Q A I GL +D+C + TG+GKT ++ LP+++ L R R
Sbjct: 199 MSFTQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFMLPVLERLIYKPREAPVTR 254
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV H++ QF +
Sbjct: 255 VLVLVPTRELGIQV------------------HAVTRQLAQFTEV-------------TT 283
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
AVG GL V A L+S D+L+ATPGRL+
Sbjct: 284 CLAVG---GLDVKTQEAA--------------------------LRSGPDVLIATPGRLI 314
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F+L + L++DE DR+L E ++ + +++L
Sbjct: 315 DHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRL-------------------- 354
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C +R ++ SAT++++ LA + L +P+ + P
Sbjct: 355 --------CSHQRQ----------TLLFSATMSEEVKDLASVSLRNPVRIFVNSNTDVAP 396
Query: 299 ERLESYKLICESKLKPLYLVA--LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ VA LL ++ ++FT + + HR+ LL G +++
Sbjct: 397 FLRQEFVRIRPNREGDREAVACALLTRTFQDHVMLFTQTKKQAHRMHILLGLMG---LQV 453
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D++GV V+N P +K Y+HR
Sbjct: 454 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIDGVKTVINLTMPGTVKHYVHR 513
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++KA P+ + IP +I R
Sbjct: 514 VGRTARAGKAGRSVSLVGEEERKMLKEIVKKA---QAPVKARVIPQDVISKFR 563
>gi|57529371|ref|NP_001006293.1| probable ATP-dependent RNA helicase DDX27 [Gallus gallus]
gi|53130268|emb|CAG31463.1| hypothetical protein RCJMB04_6k21 [Gallus gallus]
Length = 758
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 208/473 (43%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G P+Q A I GL +D+C + TG+GKT ++ LP+++ L R R
Sbjct: 198 LGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITR 253
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 254 VLVLVPTRELGIQV------------------HSVTKQLAQFSSV-------------TT 282
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
AVG GL V A L+S DIL+ATPGRL+
Sbjct: 283 CLAVG---GLDVKTQEAA--------------------------LRSGPDILIATPGRLI 313
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +++L
Sbjct: 314 DHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRL-------------------- 353
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ LA + L +P + P
Sbjct: 354 --------CSRHRQ----------TMLFSATMTEEVKDLASVSLKNPTRIFVNSNTDVAP 395
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 396 FLRQEFIRIRPNREGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMG---LRV 452
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P K Y+HR
Sbjct: 453 GELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHR 512
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 513 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KTPVKARILPQDVILKFR 562
>gi|195123476|ref|XP_002006232.1| GI18677 [Drosophila mojavensis]
gi|193911300|gb|EDW10167.1| GI18677 [Drosophila mojavensis]
Length = 787
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP V+ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTVERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --EVGLAIGGLDVKAQETVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ S IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIEKYR 540
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 190/444 (42%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG P+QV ++I L RD+ + TGSGKT ++ +PI+Q L + + A
Sbjct: 127 MGFKHPTPIQV----KSIPEALQSRDVIGLAQTGSGKTAAFTIPILQALWDNP-KPFFAC 181
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ QV+ A+
Sbjct: 182 VLAPTRELAYQISQ-----------------------------------QVE----ALGS 202
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG + + L KRP ++VATPGRL DH
Sbjct: 203 TIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIVATPGRLQDH 241
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +LQ S
Sbjct: 242 LENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ----------------------S 279
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ RR M+ SAT+T KL + L +P+ + +T+Y
Sbjct: 280 IPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV-DTKYTTVST 322
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ + L K YLV L IVFT +V + RL LL G I +
Sbjct: 323 LKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLH--- 379
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K YIHR GRT
Sbjct: 380 GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRT 439
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ GR TL+ + +V+ +++
Sbjct: 440 ARAGRSGRSVTLVTQYDVELLQRI 463
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 189/432 (43%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L D+ + TGSGKT ++ +P++Q L R L ALV+ PTR+LA Q+
Sbjct: 46 IQEEAIPVALQGNDVIGLAETGSGKTGAFCIPVLQALLENPQR-LFALVLTPTRELAFQI 104
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
++ F A+ A+G+ + VG
Sbjct: 105 ---------------------------------------EEQFKALGSAIGIKTCVVVGG 125
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P ++VATPGRL+DH+ T+GFTL +
Sbjct: 126 VDMMGQQIILAKKPH---------------------VVVATPGRLVDHLEKTKGFTLRSI 164
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DR+L +++ L T+L++ E R TFL
Sbjct: 165 KFLVLDEADRILNMDFESELDTILKVI--PRERR-----TFL------------------ 199
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L P+ +Y ++L Y L SK
Sbjct: 200 -------------FSATMTGKVKKLQRAALTKPVKCAVN-NKYHTVDKLFQYYLFLPSKD 245
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL A++ L I+F + +T R +L + G I G Q+ R L
Sbjct: 246 KDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLG---ISAVPLHGQMSQAKRLGAL 302
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +LV++D +RG+D+ V+ V+N D PA K YIHR GRTARAG+ G+ T
Sbjct: 303 NKFKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRFGKSVTF 362
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 363 VTQYDVELYQRI 374
>gi|354480665|ref|XP_003502525.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Cricetulus
griseus]
Length = 788
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 229 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTR 284
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 285 VLVLVPTRELGIQV------------------HSVTKQLAQFCSV--------------- 311
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 312 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 344
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 345 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 381
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 382 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 426
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL L +++
Sbjct: 427 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGL---LGLQV 483
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P +K Y+HR
Sbjct: 484 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHR 543
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + IP +I R
Sbjct: 544 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARIIPQDVILKFR 593
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 194/446 (43%), Gaps = 115/446 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVR 55
MG + +Q+ E I P L +DL + TGSGKT ++ALPI+ L N
Sbjct: 20 MGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPNHFFA 75
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
C V+ PTR+LA+Q++ + F
Sbjct: 76 C----VMSPTRELAIQIS---------------------------------------EQF 92
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
A+ +G+ + VG + + ++ K P I+V TPG
Sbjct: 93 EALGSEIGVKCAVLVGGIDMVQQSVKIAKLP---------------------HIIVGTPG 131
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
R++DH+ T+GF+L L YLV+DE DRLL E ++ L +L + + TFL
Sbjct: 132 RVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERR-------TFL- 183
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
SAT+T+ KL ++ L +P+ + T ++Y
Sbjct: 184 ------------------------------FSATMTKKVEKLQRVCLRNPVKIET-SSKY 212
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
+ L+ +K K YLV +L + +VFT + +ST L +L + G I
Sbjct: 213 STVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIP 272
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
I +G Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIH
Sbjct: 273 I---NGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIH 329
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRF 441
R GRTARAG+ G +L+++ E++ +
Sbjct: 330 RVGRTARAGRSGVAISLVNQYELEWY 355
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 188/444 (42%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG P+QV E L RD+ + TGSGKT ++ +PI+Q L + + A
Sbjct: 139 MGFKHPTPIQVKAIPE----ALQARDVIGLAQTGSGKTAAFTIPILQALWDNP-KPFFAC 193
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ QV+ A+
Sbjct: 194 VLAPTRELAYQISQ-----------------------------------QVE----ALGS 214
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG + + L KRP ++VATPGRL DH
Sbjct: 215 TIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIVATPGRLQDH 253
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +LQ S
Sbjct: 254 LENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ----------------------S 291
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ RR M+ SAT+T KL + L +P+ + +T+Y
Sbjct: 292 IPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV-DTKYTTVST 334
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ + L K YLV L IVFT +V + RL LL G I +
Sbjct: 335 LKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPL---H 391
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K YIHR GRT
Sbjct: 392 GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRT 451
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ GR TL+ + +V+ +++
Sbjct: 452 ARAGRSGRSVTLVTQYDVELLQRI 475
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 201/454 (44%), Gaps = 107/454 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + ++I L RD+ + TGSGKT ++A+P++Q+L + L +V+ PTR
Sbjct: 84 FTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENP-QPLYCVVLAPTR 142
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ + F A+ A+GL
Sbjct: 143 ELAYQIS---------------------------------------ETFEALGSAMGLRT 163
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG ++ + L K+P ++VATPGRL+DH+ T+G
Sbjct: 164 AVVVGGMNMMTQAVALSKKPH---------------------VIVATPGRLVDHLENTKG 202
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL D E F PS LK I R
Sbjct: 203 FSLRTLKFLVMDEADRLL-----------------DME--------FGPSLDKILKVIPR 237
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+R + SAT+T KL + L P+ + T+Y+ + L Y +
Sbjct: 238 ---QRN----------TYLFSATMTSKVEKLQRASLVDPVRVAVS-TKYQTADNLLQYMV 283
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
C K K +LV L+ I+F + T R+ LL + G I + G Q+
Sbjct: 284 FCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLH---GDLSQT 340
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ G +L+++D +RG+D+ V+ V+NYD P+ K+YIHR GRTARAG+
Sbjct: 341 ARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRTARAGRA 400
Query: 427 GRCFTLLHKDEVK---RFKKLLQKADNDSCPIHS 457
G+ L+ + +++ R + L K DS P+ S
Sbjct: 401 GKSVALVSQYDLELYLRIEGALGKK-LDSYPLES 433
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 106/444 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q ++I L RD+ + TGSGKT ++ALP++Q L + + L
Sbjct: 70 LGYTKPTPIQA----QSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP-QAFFGL 124
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ F A+
Sbjct: 125 VLAPTRELAAQIGQQ---------------------------------------FEALGS 145
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L + VG + + L K+P +++ATPGRL+DH
Sbjct: 146 LISLRTAVIVGGLDMVAQAIALGKKPH---------------------VIIATPGRLVDH 184
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 185 LEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK---------------FVPRE--- 226
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L P+ ++ +Y+
Sbjct: 227 ----RRT----------------FLFSATMSSKIESLQRASLRDPVRVSISSNKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L Y L K ++L+ LL +K ++FT +V T RL LL G I +
Sbjct: 267 LLQYYLFIPHTQKDVHLIYLLNEHAGKKIMIFTRTVAETQRLAILLRSLGFGAIPLH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R L FR G +LV++D RG+DV V+ VVN+D P KT+IHR GRT
Sbjct: 324 GQLNQTARLGALNKFRTGTRSILVATDVAARGLDVPAVDVVVNHDLPQDSKTFIHRIGRT 383
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G +L+ + +++ F ++
Sbjct: 384 ARAGKSGIALSLVTQYDLEIFLRI 407
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 194/444 (43%), Gaps = 105/444 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ A+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + LV+ PTR
Sbjct: 65 YKAPTAIQAESIPLALQNRDLIGLAETGSGKTAAFALPILQALMDKP-QPFFGLVLAPTR 123
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ A F A+ + +
Sbjct: 124 ELAYQISEA---------------------------------------FEALGSTISVRS 144
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + + KRP I+VATPGRL+DH+ T+G
Sbjct: 145 VVLVGGMDMVPQAIAIGKRPH---------------------IIVATPGRLLDHLENTKG 183
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + + +L++ LP RR
Sbjct: 184 FSLRSLKYLVMDEADRLLDMDFGPIIDKILKV---------------LPRE-------RR 221
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L +PL ++ +Y+ L Y +
Sbjct: 222 T----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQYYM 265
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K ++L+ LL + I+FT ++ T+RL L G I + G QS
Sbjct: 266 FIPHKHKDVHLIWLLNEHIGQTTIIFTRTIHETNRLALLTRFLGFSAIALH---GQLSQS 322
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R ++ FR +L+++D RG+D+ V+ V+NYD A KT++HR GRTARAG+
Sbjct: 323 SRLASISKFRSKTRSILIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGRTARAGKS 382
Query: 427 GRCFTLLHKDEVK---RFKKLLQK 447
G+ +L+ + +V+ R +K L K
Sbjct: 383 GKAISLVTQYDVEVWLRIEKALDK 406
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 211/479 (44%), Gaps = 130/479 (27%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R A
Sbjct: 226 LGFNTPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAA 281
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL V++PTR+LA+Q C + +A H+ C
Sbjct: 282 TRCL---VLVPTRELAVQ---------CFEVGTKLAAHTDIRSC---------------- 313
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
L VG S+ + + L RP D+++AT
Sbjct: 314 --------------LVVGGLSLKAQEASLRTRP---------------------DVVIAT 338
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + FTLE L LV+DE DR+L E+ FSD T
Sbjct: 339 PGRLIDHLRNSPTFTLEALDILVLDEADRML-------------------EDGFSDELTE 379
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+ I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 380 I---------IKSC---------PTSRQT-MLFSATMTDTVDELVRMSLNKPVRL----- 415
Query: 294 RYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
+ P+R + L+ E + L AL + K I+F S + H++ +
Sbjct: 416 -FVDPKRTTARGLVQEFVRVRAGKEAERSALLAALCKRTFRTKSIIFFRSKKLAHQMRIV 474
Query: 346 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 405
+ G +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD
Sbjct: 475 FSLLG---MKSDELHGDLSQEQRLKALQQFRDGTVDYLMATDLASRGLDIKGIETVINYD 531
Query: 406 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH-SIPSSLI 463
P + Y+HR GRTARAG+ GR TL+ + + K K ++ A + H +P+ I
Sbjct: 532 MPGQLALYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHAAGEDQVRHRQVPAEAI 590
>gi|261189897|ref|XP_002621359.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
gi|239591595|gb|EEQ74176.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
Length = 834
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 214/463 (46%), Gaps = 106/463 (22%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + Q+TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 325 GLTSVGFTTPTPIQQKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 384
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 385 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 416
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 417 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 444
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 445 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 489
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L+ P+ L + +
Sbjct: 490 QT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVG 526
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ I+F + + HR+ + FG + +K
Sbjct: 527 TLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRII---FGLMGLKA 583
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 584 AELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 643
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
GRTARAG+ GR TL + + K K ++ I S P
Sbjct: 644 VGRTARAGRSGRACTLAAEPDRKVVKAAVKTGRAQGAKIVSRP 686
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 188/444 (42%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG P+QV E L RD+ + TGSGKT ++ +PI+Q L + + A
Sbjct: 133 MGFQHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWDNP-KPFFAC 187
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ QV+ A+
Sbjct: 188 VLAPTRELAYQISQ-----------------------------------QVE----ALGS 208
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG + + L KRP ++VATPGRL DH
Sbjct: 209 TIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIVATPGRLQDH 247
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +LQ S
Sbjct: 248 LENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ----------------------S 285
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ RR M+ SAT+T KL + L +P+ + +T+Y
Sbjct: 286 IPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV-DTKYTTVST 328
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ + L K YLV L IVFT +V + RL LL G I +
Sbjct: 329 LKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLH--- 385
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K YIHR GRT
Sbjct: 386 GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRT 445
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ GR TL+ + +V+ +++
Sbjct: 446 ARAGRSGRSVTLVTQYDVELLQRI 469
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 204/472 (43%), Gaps = 111/472 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G P+Q A I L +D+ + TGSGKT ++ +PI++ L +A
Sbjct: 237 LGFEKPTPIQAAA----IPVALLGKDVVGGAVTGSGKTAAFVIPILERLLFRDRGKAAAT 292
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R +++ PTR+LA+Q C H++A F + F
Sbjct: 293 TRVVILCPTRELAVQ---------C---------HAVATRIGSFTDVRF----------- 323
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + +EL RP D+++ATPGR
Sbjct: 324 ----------SLVVGGLSLKGQEAELRTRP---------------------DVVIATPGR 352
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ + F+L+ L L++DE DR+L E + A L +
Sbjct: 353 LIDHLRNSPSFSLDMLDVLIMDEADRMLEEGFAAELGEI--------------------- 391
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
I C +R M+ SAT+T ++L ++ L+ P+ L +
Sbjct: 392 -------ISACPKQR----------QTMLFSATMTDSVDELIRMGLNKPVRLFVDPRKST 434
Query: 297 LPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
+ + + +++ +P L+ L + +CI+F S H++ + FG L +
Sbjct: 435 ASGLTQEFVRVRDNREDDRPALLMTLCKRTFRTRCIIFFRSKAFAHQMRIV---FGLLGM 491
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
K E G Q R + L+ F++G + L+++D +RG+D+ G+ V+NYD P I Y+
Sbjct: 492 KAGELHGNLTQEQRLRALQQFKDGDVDFLLATDLASRGLDIRGIETVINYDMPGQIAQYL 551
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
HR GRTARAG GR TL+ + + K K +++ + D +P+ + +
Sbjct: 552 HRVGRTARAGSKGRSVTLVGEADRKMLKAVIKHSPADQVKHRLVPAEAVAKM 603
>gi|124249330|ref|NP_694705.2| probable ATP-dependent RNA helicase DDX27 [Mus musculus]
gi|341940504|sp|Q921N6.3|DDX27_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|74140985|dbj|BAE22077.1| unnamed protein product [Mus musculus]
gi|74210620|dbj|BAE23664.1| unnamed protein product [Mus musculus]
gi|148674548|gb|EDL06495.1| mCG14602, isoform CRA_c [Mus musculus]
Length = 760
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 202 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTR 257
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 258 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 317
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 318 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 354
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 355 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 399
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL L +++
Sbjct: 400 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGL---LGLQV 456
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P +K Y+HR
Sbjct: 457 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHR 516
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 517 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 566
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 186/439 (42%), Gaps = 106/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + L
Sbjct: 70 MGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENP-QSFFGL 124
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ + F ++
Sbjct: 125 ILAPTRELAFQISKS---------------------------------------FESLGS 145
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P I+VATPGRL+DH
Sbjct: 146 TINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDH 184
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 185 LENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKV---------------LPRE--- 226
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 227 ----RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 267 LLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR GRT
Sbjct: 324 GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRT 383
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 384 ARAGKSGVAISFVTQYDVE 402
>gi|312370859|gb|EFR19169.1| hypothetical protein AND_22947 [Anopheles darlingi]
Length = 490
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 197/438 (44%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ V + +E I L +D+ + TGSGKT ++ALPI+Q L + R A+V+ PTR
Sbjct: 68 WKVPSKIQREAIPLALNGKDIIGLAETGSGKTAAFALPILQALLDNPQRYF-AVVLTPTR 126
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ + F A+ +G+
Sbjct: 127 ELAYQIS---------------------------------------EQFEALGTMIGVKC 147
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + +L ++P I++ATPGRL+DH+ T+G
Sbjct: 148 CVVVGGMDLVAQALQLARKPH---------------------IIIATPGRLVDHLENTKG 186
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L+ L YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 187 FGLKALKYLVMDEADRILNMDFEVEVNKILRVIPRERR-------TFL------------ 227
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T+ KL + L P+ + ++Y+ ++L Y +
Sbjct: 228 -------------------FSATMTKKVKKLERASLRDPVKVEVS-SKYQTVDKLLQYYI 267
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+K K +YLV +L L ++F S+ +T R +L G + + G Q+
Sbjct: 268 FIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMTQN 324
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ Q+L+S+D +RG+D+ V+ V+N D P + K YIHR GRTARAG+
Sbjct: 325 KRLAALNKFKSQTRQILISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRTARAGRA 384
Query: 427 GRCFTLLHKDEVKRFKKL 444
G+ T + + +V+ ++++
Sbjct: 385 GQAITFVTQYDVELYQRI 402
>gi|348564128|ref|XP_003467857.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Cavia
porcellus]
Length = 803
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 213/473 (45%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 243 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 298
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 299 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 325
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 326 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 358
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 359 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 395
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T++ LA + L +P+ + P
Sbjct: 396 -----IRMCSHHRQ----------TMLFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAP 440
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL L +++
Sbjct: 441 FLRQEFIRIRPNREGDREAIVAALLTRSFTDHVMLFTQTKKQAHRMHILLGL---LGLQV 497
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 498 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 557
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 558 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 607
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 188/427 (44%), Gaps = 103/427 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA+Q+
Sbjct: 9 IQAEVLPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAVQI 67
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
QF+S I A+G+ +G
Sbjct: 68 ------------------------AQQFES---------------IGSAMGVRCATIIGG 88
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
I + L K+P I+VATPGRL DH+ T+GF+L L
Sbjct: 89 VDIMAQKVALAKKPH---------------------IVVATPGRLNDHLEETKGFSLRSL 127
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + + +L++ + +T+L
Sbjct: 128 QFLVLDEADRLLDMDFGPIIDKILKVIPKER-------TTYL------------------ 162
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + ++Y L Y L+
Sbjct: 163 -------------FSATMTTKVAKLQRASLSNPVRIEV-NSKYSTVSTLLQYYLLIPLPQ 208
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++L+ L +L + I+FT +V RL +L G I + G QS R L
Sbjct: 209 KDVHLIYLANTLAQNSIIIFTRTVHDAQRLSIILRTLGFPAIPL---HGQLSQSARLGAL 265
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +VLV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 266 GKFKSGGRKVLVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTL 325
Query: 433 LHKDEVK 439
+ + +V+
Sbjct: 326 VTQYDVE 332
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 192/433 (44%), Gaps = 103/433 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ Q +I L +DL + TGSGKT ++ALPI+Q L + L A ++ PTR+LA Q+
Sbjct: 128 IQQASIPLALAGKDLIGLAETGSGKTAAFALPILQALYHSPHSTLFACILAPTRELAFQI 187
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + AI ++G+ + VG
Sbjct: 188 S---------------------------------------EQTEAIGGSLGVKTCVIVGG 208
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP I+VATPGRL+DH+ T+GF+L +
Sbjct: 209 MDMMPQAIALSKRPH---------------------IIVATPGRLLDHLENTKGFSLRSI 247
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + +L++ LP
Sbjct: 248 KYLVMDEADRLLDLDFGPIIEKILKV---------------LP----------------- 275
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P+ + SAT+T +L ++ L +P+ + ++Y+ + L Y ++ K
Sbjct: 276 ------PQRNTYLFSATMTDKVERLQRMSLTNPVRVAV-SSKYQTVKSLLQYFMLIPQKD 328
Query: 313 KPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YLV L+ + + I+FT ++ T R+ LL G I + G Q+ R
Sbjct: 329 KDTYLVYLVAEKFAGKTMIIFTRTIMDTQRISVLLRLLGCSAIPL---HGQLSQTGRLGA 385
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ G +LV++D RG+D+ V+ V+NYD KTYIHR GRTARAG+ G C
Sbjct: 386 LNKFKAGARNILVATDVAARGLDIPTVDYVINYDIAGDSKTYIHRVGRTARAGRSGVCVN 445
Query: 432 LLHKDEVKRFKKL 444
L+ + +++ F ++
Sbjct: 446 LVTQYDIEEFTRI 458
>gi|326932134|ref|XP_003212175.1| PREDICTED: hypothetical protein LOC100549747 [Meleagris gallopavo]
Length = 1561
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 201/452 (44%), Gaps = 109/452 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G P+Q A I GL +D+C + TG+GKT ++ LP+++ L R R
Sbjct: 1001 LGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITR 1056
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S V + +
Sbjct: 1057 VLVLVPTRELGIQV------------------HSVTKQLAQFSS-----------VTSCL 1087
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A VG GL V A L+S DIL+ATPGRL+
Sbjct: 1088 A--VG---GLDVKTQEAA--------------------------LRSGPDILIATPGRLI 1116
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 1117 DHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEI----------------------- 1153
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T++ LA + L +P + P
Sbjct: 1154 -----IRLCSKHRQT----------MLFSATMTEEVKDLASVSLKNPTRIFVNSNTDVAP 1198
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL G +++
Sbjct: 1199 FLRQEFIRIRPNREGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMG---LRV 1255
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P K Y+HR
Sbjct: 1256 GELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHR 1315
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
GRTARAG+ GR +L+ ++E K K++++ A
Sbjct: 1316 VGRTARAGRAGRSVSLVGEEERKMLKEIVKSA 1347
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 192/439 (43%), Gaps = 113/439 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+++ + E I P L +DL + TGSGKT ++ALPI+ L N C V+
Sbjct: 749 PLEIQI--EAIPPALEGKDLIGLAKTGSGKTGAFALPILHALLEAPRPNHFFAC----VM 802
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
PTR+LA+Q++ + F A+ +
Sbjct: 803 SPTRELAIQIS---------------------------------------EQFEALGSEI 823
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
G+ + VG + + ++ K P I+V TPGR++DH+
Sbjct: 824 GVKCAVLVGGIDMVQQSVKIAKLPH---------------------IIVGTPGRVLDHLK 862
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T+GF+L L YLV+DE DRLL E ++ L +L G +
Sbjct: 863 NTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL----------------------GMIP 900
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 302
RR + SAT+T KL ++ L +P+ + T ++Y + L+
Sbjct: 901 RERRT----------------FLFSATMTNKVEKLQRVCLRNPVKIETS-SKYSTVDTLK 943
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+K K YLV +L + +VFT + +ST L +L + G I I +G
Sbjct: 944 QQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPI---NGH 1000
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTAR
Sbjct: 1001 MSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTAR 1060
Query: 423 AGQLGRCFTLLHKDEVKRF 441
AG+ G +L+++ E++ +
Sbjct: 1061 AGRSGVAISLVNQYELEWY 1079
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 185/433 (42%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q QE I L RD+ + TGSGKT ++ALPI+Q L ++ + L AL
Sbjct: 83 LGYKNPTPIQ----QEAIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFAL 137
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ A F A+
Sbjct: 138 VLAPTRELAAQIAQA---------------------------------------FEALGS 158
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L L +G + + L K+P ++VATPGRL+DH
Sbjct: 159 LISLRCALILGGLDMVQQAIALGKKPH---------------------VVVATPGRLLDH 197
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L +LV+DE DRLL + L +L+ FLP
Sbjct: 198 LEKTKGFSLRNLKFLVMDEADRLLDMDFGPILEKILK---------------FLPRE--- 239
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL ++ ++Y+
Sbjct: 240 ----RRT----------------FLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVST 279
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L + K YL+ L + I+FT +V T R+ LL G I + +
Sbjct: 280 LVQNYIFIPHMHKDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL--HG 337
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
GL QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR GRT
Sbjct: 338 GLS-QSARLGALNKFRAKSRDILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRT 396
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G + +
Sbjct: 397 ARAGKSGHAISFV 409
>gi|300175700|emb|CBK21243.2| unnamed protein product [Blastocystis hominis]
Length = 485
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 188/426 (44%), Gaps = 106/426 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+D+ + TGSGKT ++A+PI+Q L + R + AL+V PTR+LA Q++
Sbjct: 93 KDIIAIAETGSGKTGAFAIPIIQRLIDNPQR-MYALIVTPTRELAFQIS----------- 140
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
+ F A+ +VGL + VG + + L +
Sbjct: 141 ----------------------------EQFEALGSSVGLKTAVIVGGIDMVQQALALAR 172
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+P ++V TPGRL+DH+ T+GF+L + YLV+DE DR L
Sbjct: 173 KPH---------------------VVVGTPGRLVDHLENTKGFSLNTMKYLVLDEADRCL 211
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
++ + +L S F P R V
Sbjct: 212 SMDFEEAIDKIL-------------------SCF------------------PKER-VTY 233
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
+ SAT+TQ KL + L P+ + ++Y+ L L +K K YL ++
Sbjct: 234 LFSATMTQKVVKLQRASLQDPVKIQVS-SKYQTVSTLIQQYLFIPAKYKECYLAFIMNEF 292
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ I+F S+ S+ L L + G + I +G Q R L F+EG +L+
Sbjct: 293 RGKSTILFVSTCSSSQLLTLFLRNLGFKAVCI---NGNLSQVKRLGALNKFKEGARNILI 349
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV---KRF 441
++D +RG+D+ V+ VVNYD P K Y+HR GRTARAG+ GR T + + +V +R
Sbjct: 350 ATDVASRGLDIPEVDLVVNYDIPGNGKDYVHRVGRTARAGKSGRAITFVTQYDVESYQRI 409
Query: 442 KKLLQK 447
+KL++K
Sbjct: 410 EKLIEK 415
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 188/444 (42%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG P+QV E L RD+ + TGSGKT ++ +PI+Q L + + A
Sbjct: 122 MGFKHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWDNP-KPFFAC 176
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ QV+ A+
Sbjct: 177 VLAPTRELAYQISQ-----------------------------------QVE----ALGS 197
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG + + L KRP ++VATPGRL DH
Sbjct: 198 TIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIVATPGRLQDH 236
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +LQ S
Sbjct: 237 LENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ----------------------S 274
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ RR M+ SAT+T KL + L +P+ + +T+Y
Sbjct: 275 IPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV-DTKYTTVST 317
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ + + K YLV L IVFT +V + RL LL G I +
Sbjct: 318 LKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLH--- 374
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K YIHR GRT
Sbjct: 375 GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRT 434
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ GR TL+ + +V+ +++
Sbjct: 435 ARAGRSGRSVTLVTQYDVELLQRI 458
>gi|58266632|ref|XP_570472.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110998|ref|XP_775963.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818015|sp|P0CQ93.1|DRS1_CRYNB RecName: Full=ATP-dependent RNA helicase DRS1
gi|338818016|sp|P0CQ92.1|DRS1_CRYNJ RecName: Full=ATP-dependent RNA helicase DRS1
gi|50258629|gb|EAL21316.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226705|gb|AAW43165.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 808
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 197/466 (42%), Gaps = 105/466 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-----AVRCLRALV 61
F + I L RD+ ++ TGSGKT ++ +PI++ L R C R LV
Sbjct: 242 FTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAAC-RVLV 300
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
+ PTR+LA+Q C+ K A+A
Sbjct: 301 LCPTRELAVQ-----CEAVGK----------------------------------ALAEK 321
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
GL V A+ L G+ + + L++ DIL+ATPGRL+DH+
Sbjct: 322 GGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIATPGRLIDHL 362
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
T FTL L LV+DE DR+L + L +
Sbjct: 363 TNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI-------------------------- 396
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 301
I+ C P R M+ SAT+T ++L +L L P+ + R
Sbjct: 397 --IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTARGLT 444
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ + I + L+AL + EKCI+F S H++ + FG +K E G
Sbjct: 445 QEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFG---LKAAELHG 501
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R + L F+ G + L+++D +RG+D++GV V+NYD P + Y HR GRTA
Sbjct: 502 NLTQEQRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTA 561
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
RAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 562 RAGRKGRSVSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMK 607
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 194/446 (43%), Gaps = 115/446 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVR 55
MG + +Q+ E I P L +DL + TGSGKT ++ALPI+ L N
Sbjct: 91 MGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPNHFFA 146
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
C V+ PTR+LA+Q++ + F
Sbjct: 147 C----VMSPTRELAIQIS---------------------------------------EQF 163
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
A+ +G+ + VG + + ++ K P I+V TPG
Sbjct: 164 EALGSEIGVKCAVLVGGIDMVQQSVKIAKLP---------------------HIIVGTPG 202
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
R++DH+ T+GF+L L YLV+DE DRLL E ++ L +L + + TFL
Sbjct: 203 RVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERR-------TFL- 254
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
SAT+T+ KL ++ L +P+ + T ++Y
Sbjct: 255 ------------------------------FSATMTKKVEKLQRVCLRNPVKIETS-SKY 283
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
+ L+ +K K YLV +L + +VFT + +ST L +L + G I
Sbjct: 284 STVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIP 343
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
I +G Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIH
Sbjct: 344 I---NGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIH 400
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRF 441
R GRTARAG+ G +L+++ E++ +
Sbjct: 401 RVGRTARAGRSGVAISLVNQYELEWY 426
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 206/469 (43%), Gaps = 114/469 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA- 59
+G P+Q AV I + RD+C + TGSGKT ++ LP ++ + +R R A
Sbjct: 166 LGYKKPTPIQAAV----IPIAMTGRDVCGRAVTGSGKTAAFMLPQLERMLHRGPRPAAAT 221
Query: 60 --LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
LV++PTR+LA+QV H + E QF ++ +
Sbjct: 222 HVLVLVPTRELAVQV------------------HQMTESLAQFTTIRAV----------- 252
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
L VG S + + L RP +I+VATPGR+
Sbjct: 253 ----------LVVGGLSANVQAAALRTRP---------------------EIVVATPGRV 281
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ T F LE L L++DE DRLL + + +
Sbjct: 282 IDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEI---------------------- 319
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
+R+C P R ++ SATLT LA L + +P L+ +T
Sbjct: 320 ------VRQC---------PKKRQT-LLFSATLTAGVEALASLSMKNPARLS-ADTLGTT 362
Query: 298 PERL--ESYKLI-CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
P+RL E KL +S K +L+A++ ++ I+F+ + + HRL ++ G I
Sbjct: 363 PKRLVEEVLKLKPNQSAQKEAFLMAIVSRSYDKSTIIFSQTKQEAHRLKIIM---GLSDI 419
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
K E G Q+ R L FR G + L+++D RG+D+ V+ V+++D P + +Y+
Sbjct: 420 KAGELHGDMTQTQRLAALDEFRTGTVTHLIATDVAARGLDIPSVDAVISFDAPKTLASYL 479
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
HR GRTARAG+ G T + + + K K + ++ N I +P +++
Sbjct: 480 HRVGRTARAGKKGTALTFMEESDRKLVKTIAKRGANLKARI--VPGNIV 526
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 85 IQKEAIPVALQGKDIIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 143
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 144 G---------------------------------------EQFEALGSGIGIKCCVVVGG 164
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 165 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENLKGFNLKAI 203
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 204 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 236
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ ++L+ Y + K
Sbjct: 237 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVDQLQQYYIFIPVKY 284
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 285 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 341
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 342 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITM 401
Query: 433 LHKDEVKRFKKLLQ 446
+ + +++ ++++ Q
Sbjct: 402 VTQYDIELYQRIEQ 415
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 185/438 (42%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ A F + + +
Sbjct: 131 ELAYQISQA---------------------------------------FEGLGSTISVRS 151
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 152 TVLVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKG 190
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L +L YLV+DE DRLL + L +L++ LP RR
Sbjct: 191 FSLRNLKYLVMDEADRLLDMDFGPILDKILKV---------------LPRE-------RR 228
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L +PL + ++++ L+ +
Sbjct: 229 T----------------YLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYI 272
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K LYLV LL + CI+F +V T RL L G I + G QS
Sbjct: 273 FIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLH---GQLSQS 329
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR +LV++D RG+D+ V+ V+N+D P KT+IHR GRTARAG+
Sbjct: 330 ARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKS 389
Query: 427 GRCFTLLHKDEVKRFKKL 444
G + + +V+ + ++
Sbjct: 390 GVAISFATQYDVEAWLRI 407
>gi|209447030|ref|NP_001129273.1| probable ATP-dependent RNA helicase DDX27 [Rattus norvegicus]
gi|169642292|gb|AAI60885.1| Ddx27 protein [Rattus norvegicus]
Length = 761
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 202 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTR 257
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 258 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 317
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 318 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 354
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 355 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 399
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL L +++
Sbjct: 400 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGL---LGLQV 456
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P +K Y+HR
Sbjct: 457 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHR 516
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 517 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 566
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 185/438 (42%), Gaps = 102/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ A F + + +
Sbjct: 131 ELAYQISQA---------------------------------------FEGLGSTISVRS 151
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 152 TVLVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKG 190
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L +L YLV+DE DRLL + L +L++ LP RR
Sbjct: 191 FSLRNLKYLVMDEADRLLDMDFGPILDKILKV---------------LPRE-------RR 228
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L +PL + ++++ L+ +
Sbjct: 229 T----------------YLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYI 272
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K LYLV LL + CI+F +V T RL L G I + G QS
Sbjct: 273 FIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLH---GQLSQS 329
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR +LV++D RG+D+ V+ V+N+D P KT+IHR GRTARAG+
Sbjct: 330 ARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKS 389
Query: 427 GRCFTLLHKDEVKRFKKL 444
G + + +V+ + ++
Sbjct: 390 GVAISFATQYDVEAWLRI 407
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 193/434 (44%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 83 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 141
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 142 G---------------------------------------EQFEALGSGIGIKCCVIVGG 162
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 163 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENLKGFNLKAI 201
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 202 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 234
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ ++L+ Y L K
Sbjct: 235 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVDQLQQYYLFIPVKY 282
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 283 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 339
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 340 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITI 399
Query: 433 LHKDEVKRFKKLLQ 446
+ + +++ ++++ Q
Sbjct: 400 VSQYDIELYQRIEQ 413
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 210/473 (44%), Gaps = 130/473 (27%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------AVRCLRAL 60
P+Q A TI L +D+ N+ TGSGKT ++ +PI++ L R A RCL
Sbjct: 201 PIQAA----TIPVALLGKDIVGNAVTGSGKTAAFMIPILERLLYRQKGKNAAATRCL--- 253
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V++PTR+LA+Q C + +A H+ +M
Sbjct: 254 VLVPTRELAVQ---------CFEVGTKLAAHTDIQMS----------------------- 281
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
L VG S+ + + L +P D+++ATPGRL+DH
Sbjct: 282 -------LVVGGLSLKAQEATLRSKP---------------------DLVIATPGRLIDH 313
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ + F L+ L LV+DE DR+L + + L +
Sbjct: 314 LRNSPTFNLDALDVLVLDEADRMLSDGFADELEEI------------------------- 348
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
++ C P R M+ SAT+T ++L ++ L+ P+ L + P+R
Sbjct: 349 ---VKSC---------PRSRQT-MLFSATMTDSVDELVKMSLNKPVRL------FVDPKR 389
Query: 301 LESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
+ L+ E + LV L + E+ I+F S + H++ + FG L
Sbjct: 390 ATAKGLVQEFVRVKAGRESERAAILVTLCKRTFRERVIIFFRSKKLAHQMRIM---FGLL 446
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
++ E G Q R +L+AFR+GK+ L+++D +RG+D++G+ V+NYD P +
Sbjct: 447 DMRADELHGDLTQEQRLTSLQAFRDGKVDYLMATDLASRGLDIKGIETVINYDMPGQLAQ 506
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS-IPSSLIE 464
Y+HR GRTARAG+ GR TL+ + + K K ++ ++ H +P+ ++E
Sbjct: 507 YLHRVGRTARAGKNGRSVTLVGEADRKMLKAAIKHGSSEDKVRHRLVPAEVVE 559
>gi|384493436|gb|EIE83927.1| hypothetical protein RO3G_08632 [Rhizopus delemar RA 99-880]
Length = 711
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 199/446 (44%), Gaps = 106/446 (23%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++SL F + +TI L +D+C + TGSGKT ++ +PI++ L R R
Sbjct: 230 GVTSLGFVKPTPIQSQTIPIALMGKDICGGAATGSGKTAAFVIPILERLLYRPRQTPSTR 289
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS A V+F
Sbjct: 290 VLILCPTRELAAQV------------------HSAA---VKF------------------ 310
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A ++ L VG S+ + EL +P D++VATPGRL+
Sbjct: 311 AAYTDITFCLCVGGLSLKTQEQELKLKP---------------------DVVVATPGRLI 349
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ T GF L+ LV+DE DR+L + + L +
Sbjct: 350 DHVRNTSGFHLDACEILVMDEADRMLEDGFADELGEI----------------------- 386
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
++ C P R M+ SAT+T + ++L ++ LH+P+ L +
Sbjct: 387 -----VKSC---------PKSRQT-MLFSATMTDNVDQLIRMSLHNPVRLFVDRSNQAAS 431
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + I +++ + L+AL + + K I+F S + H++ L FG + +
Sbjct: 432 RLIQEFVRIRQAREADRSAVLLALCKKSFKNKVIIFFRSKAAAHQMKIL---FGLMGLNA 488
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + L+ FR+ ++ L+++D RG+D++G+ V+NY+ P Y+HR
Sbjct: 489 AELHGNLTQEQRLEALEQFRDNQVDYLLATDLAARGLDIKGIETVINYNMPTQFAQYLHR 548
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFK 442
GRTARAG+ GR TL+ + + K K
Sbjct: 549 VGRTARAGRNGRSVTLVGESDRKMLK 574
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 103/434 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 90 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 148
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 149 G---------------------------------------EQFEALGSGIGIKCCVVVGG 169
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 170 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENLKGFNLKAI 208
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 209 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 241
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ ++L+ Y + K
Sbjct: 242 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVDQLQQYYIFIPVKY 289
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 290 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 346
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 347 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITM 406
Query: 433 LHKDEVKRFKKLLQ 446
+ + +++ ++++ Q
Sbjct: 407 VTQYDIELYQRIEQ 420
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 196/432 (45%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R A+V+ PTR+LA Q+
Sbjct: 82 IQREAIPLALQGKDIIGLAETGSGKTGAFALPILQALLDNPQRYF-AVVLTPTRELAYQI 140
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ +G+ + VG
Sbjct: 141 S---------------------------------------EQFEALGATIGVKCCVIVGG 161
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L ++P I++ATPGRL+DH+ T+GF+L+ +
Sbjct: 162 MDLVTQAIQLARKPH---------------------IIIATPGRLVDHLENTKGFSLKAI 200
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 201 RYLVMDEADRILNMDFEEEVNKILKVMPRERR-------TFL------------------ 235
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L P+ + ++Y+ E+L Y L ++
Sbjct: 236 -------------FSATMTKKVKKLERASLRDPVKVEVS-SKYQTVEKLLQYYLFIPARY 281
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T R +L G + + G Q+ R L
Sbjct: 282 KNVYLVHVLNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMTQNKRLAAL 338
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ Q+L+S+D +RG+D+ V+ V+N D P + K YIHR GRTARAG+ G+ T
Sbjct: 339 NKFKSQARQILISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRTARAGRAGQAITF 398
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 399 VTQYDVELYQRI 410
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 204/458 (44%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I P L +D+ + TGSGKT ++A+PI+ L + + A V+ PTR+LA
Sbjct: 131 IQAEAIPPALEGKDIIGLAQTGSGKTAAFAIPILNQLWHDQ-QPYYACVLAPTRELA--- 186
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ A+G+ VG
Sbjct: 187 ------------------------------------QQIKETFDSLGGAMGVRTTCIVGG 210
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF++ L
Sbjct: 211 MNMIDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSMRKL 249
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++ + +T+L
Sbjct: 250 KFLVMDEADRLLDMEFGPVLDRILKIIPTQGR------TTYL------------------ 285
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T +KL + L +P+ T+Y+ + L ++ L
Sbjct: 286 -------------FSATMTSKIDKLQRASLTNPVKCAVS-TKYQTVDTLIQTLMVVPGGL 331
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +L+ LL + IVFT + + R+ TL N L G Q+ R+ L
Sbjct: 332 KNTFLIYLLNEFLGKTAIVFTRTKANAERIATLCNL---LEFSATALHGDLNQNQRTGAL 388
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 389 DLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISL 448
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R + +L + P ++ +I SLR
Sbjct: 449 VSQYDLELILRIEDVLGR----KLPKENVDKGVILSLR 482
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 206/469 (43%), Gaps = 114/469 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA- 59
+G P+Q AV I + RD+C + TGSGKT ++ LP ++ + +R R A
Sbjct: 166 LGYKKPTPIQAAV----IPIAMTGRDVCGRAVTGSGKTAAFMLPQLERMLHRGPRPAAAT 221
Query: 60 --LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
LV++PTR+LA+QV H + E QF ++ +
Sbjct: 222 HVLVLVPTRELAVQV------------------HQMTESLAQFTTIRAV----------- 252
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
L VG S + + L RP +I+VATPGR+
Sbjct: 253 ----------LVVGGLSANVQAAALRTRP---------------------EIVVATPGRV 281
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ T F LE L L++DE DRLL + + +
Sbjct: 282 IDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEI---------------------- 319
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
+R+C P R ++ SATLT LA L + +P L+ +T
Sbjct: 320 ------VRQC---------PKKRQT-LLFSATLTAGVEALASLSMKNPARLS-ADTLGTT 362
Query: 298 PERL--ESYKLI-CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
P+RL E KL +S K +L+A++ ++ I+F+ + + HRL ++ G I
Sbjct: 363 PKRLVEEVLKLKPNQSAQKEAFLMAIVSRSYDKSTIIFSQTKQEAHRLKIIM---GLSDI 419
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
K E G Q+ R L FR G + L+++D RG+D+ V+ V+++D P + +Y+
Sbjct: 420 KAGELHGDMTQTQRLAALDEFRTGTVTHLIATDVAARGLDIPSVDAVISFDAPKTLASYL 479
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 463
HR GRTARAG+ G T + + + K K + ++ N I +P +++
Sbjct: 480 HRVGRTARAGKKGTALTFMEESDRKLVKTIAKRGANLKARI--VPGNIV 526
>gi|15030137|gb|AAH11321.1| Ddx27 protein [Mus musculus]
Length = 572
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 14 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTR 69
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 70 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 96
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 97 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 129
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE D++L E ++ + +
Sbjct: 130 DHLHNCPSFHLSSIEVLILDEADKMLDEYFEEQMKEI----------------------- 166
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 167 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 211
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL L +++
Sbjct: 212 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGL---LGLQV 268
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P +K Y+HR
Sbjct: 269 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHR 328
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 329 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 378
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 190/433 (43%), Gaps = 103/433 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 71
+ Q++I + +D+ + TGSGKT ++A+P++QTL L LV+ PTR+LA Q
Sbjct: 50 IQQKSIPIAIEGKDVIGLAETGSGKTAAFAIPVLQTLLKTPGGGRLSCLVMTPTRELAFQ 109
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ ++ F A+ ++GLS VG
Sbjct: 110 I---------------------------------------REQFQALGSSIGLSCACIVG 130
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L K+P ++VATPGRL+DH+ TRGF L+
Sbjct: 131 GIEMMSQQLALAKKP---------------------HVIVATPGRLVDHLEKTRGFNLKA 169
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L +L++DE DR+L ++A + +L+ + +
Sbjct: 170 LKFLIMDEADRILNLDFEAEVDKILRAIPRERQT-------------------------- 203
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
M+ SAT+T KL + L +P+ ++ + + ++ Y I E+
Sbjct: 204 ------------MLFSATMTAKVKKLQRAALKNPVKISINSKYKTVDKNIQKYMFIPEAH 251
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YLV+LL L ++FTS+ T + L+ G + + G Q R
Sbjct: 252 -KECYLVSLLNELQGSSFMIFTSTCAKTSLIARLVKRLGYDSVPL---HGQMSQQKRLGA 307
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ +LV +D +RG+DV V+ V+NYD P K YIHR GRTARAG+ G+ T
Sbjct: 308 LARFKGKSRSILVCTDVASRGLDVPHVDCVINYDVPTNTKDYIHRVGRTARAGRAGKSVT 367
Query: 432 LLHKDEVKRFKKL 444
+ + +V+ ++K+
Sbjct: 368 FVSQYDVELYQKI 380
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 183/433 (42%), Gaps = 106/433 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q ++I L RD+ + TGSGKT ++ALP++Q L + + L
Sbjct: 70 LGYTKPTPIQA----QSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP-QAFFGL 124
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ F A+
Sbjct: 125 VLAPTRELAAQIGQQ---------------------------------------FEALGS 145
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L + VG + + L K+P ++VATPGRL+DH
Sbjct: 146 LISLRTAVIVGGLDMVAQAIALGKKPH---------------------VIVATPGRLVDH 184
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 185 LEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK---------------FIPRE--- 226
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L P+ ++ +Y+
Sbjct: 227 ----RRT----------------FLFSATMSSKIESLQRASLRDPVRVSISSNKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L Y L +LK YLV L +K +VFT +V T RL LL G I +
Sbjct: 267 LLQYYLFIPHQLKDTYLVYLANEFAGKKLVVFTRTVSETQRLAILLRTLGFGAIPLH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R L FR G+ +LV++D RG+D+ V+ V+N+D KT++HR GRT
Sbjct: 324 GQLNQTARLGALNKFRAGERSILVATDVAARGLDIPLVDVVINHDLAQDSKTHVHRIGRT 383
Query: 421 ARAGQLGRCFTLL 433
ARAG+ G +L+
Sbjct: 384 ARAGKSGIALSLV 396
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 187/421 (44%), Gaps = 103/421 (24%)
Query: 24 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIG---------- 109
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+ F A+ ++G+ + + VG + L
Sbjct: 110 -----------------------------EQFEALGASIGILIAVIVGGVDTVTQSLALA 140
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
KRP ++VATPGRL+DH+ T+GF L L YLV+DE DR+
Sbjct: 141 KRP---------------------HVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L ++ L +L++ + T+L
Sbjct: 180 LNMDFEVELEKILKVIPKERR-------TYL----------------------------- 203
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 323
SAT+T+ KL + L+ P+ + ++Y+ ++L+ Y + K K YL+ +L
Sbjct: 204 --YSATMTKKVAKLERASLNDPVRIEVS-SKYQTVDKLKQYYIFIPYKYKEAYLIYILNE 260
Query: 324 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 383
+ + IVF S+ S + +L G + + G Q+ R +L F+ VL
Sbjct: 261 MAGQTAIVFCSTCASALKTALMLRKLGFGAVPL---HGQMSQAKRLGSLNKFKSKASTVL 317
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
V +D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T + + +V+ ++K
Sbjct: 318 VCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTARAGRSGVAITFVTQYDVEIYQK 377
Query: 444 L 444
+
Sbjct: 378 I 378
>gi|195381768|ref|XP_002049617.1| GJ21693 [Drosophila virilis]
gi|194144414|gb|EDW60810.1| GJ21693 [Drosophila virilis]
Length = 784
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP V+ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTVERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQETVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T F+L+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFSLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ S IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIEKYR 540
>gi|397475811|ref|XP_003809313.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Pan paniscus]
Length = 605
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 210/476 (44%), Gaps = 89/476 (18%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 14 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 69
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 70 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 93
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 94 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 129
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS-DNENRFSDASTFLPSA 237
DH++ F L + L++DE D PT+ L S L
Sbjct: 130 DHLHNCPSFHLSSIEVLILDEADSPPVGTACPHAPTLWLLHLPFPQPGAISCPFRMLDEY 189
Query: 238 FGSL--KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
F + IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 190 FEEQMKEIIRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTD 239
Query: 296 KLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
P + + I ++ + + ALL + ++FT + + HR+ LL G
Sbjct: 240 VAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG--- 296
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y
Sbjct: 297 LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHY 356
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 357 VHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 409
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 200/438 (45%), Gaps = 111/438 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT ++ALPI++ L R R +R
Sbjct: 135 LGYRQPTPIQAAC----IPLALAGRDICGSAVTGSGKTAAFALPILERLLFRPRRIPAIR 190
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q+ HS+ E QF +
Sbjct: 191 VLIITPTRELAVQL------------------HSMIEKLAQFTDI--------------- 217
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G SS E++ L++ DI+VATPGR++
Sbjct: 218 --RCSLVVG---GLSSKVQEVA----------------------LRTHPDIVVATPGRMI 250
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ T+ LE L LV+DE DRLL ++ + +++L PS
Sbjct: 251 DHLRNTQSVGLEELAILVLDEADRLLELGFREEIHELVKL---------------CPS-- 293
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT---TGETRY 295
R M+ SAT+T + ++L +L L P+ L+ + E
Sbjct: 294 ---------------------RRQTMLFSATMTDEVSELIKLSLKSPVRLSADPSTERPS 332
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E + + L +SL + K I+F+ + HRL L FG +K
Sbjct: 333 TLTEEVIRIRAGHEGDKEAIVLSLCSRSL-KSKTIIFSGTKVEAHRLKIL---FGLSGLK 388
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+AFR+ ++ L+++D RG+D+ GV +V+N + P IKTY+H
Sbjct: 389 SAELHGNLTQAQRLEALEAFRKQEVDFLIATDVAARGLDIIGVESVINLECPKEIKTYVH 448
Query: 416 RAGRTARAGQLGRCFTLL 433
R GRTARAG+ GR TL+
Sbjct: 449 RVGRTARAGRHGRSVTLM 466
>gi|351703078|gb|EHB05997.1| Putative ATP-dependent RNA helicase DDX27 [Heterocephalus glaber]
Length = 765
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 211/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF S+
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQFCSI--------------- 287
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 288 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 357
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 358 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 402
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HR+ LL L +++
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGL---LGLQV 459
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 460 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 519
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 520 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILRFR 569
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E+I L +RD+ + TGSGKT ++ALP++Q+L N + V+ PTR+LA Q+
Sbjct: 98 IQAESIPYALEDRDIIGLAQTGSGKTAAFALPVLQSLWNDP-KPFFCCVLAPTRELAYQI 156
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ QFD A+ +G+ + VG
Sbjct: 157 SQ------------------------QFD---------------ALGSTIGVKTAVIVGG 177
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP I+VATPGRL DH+ T+GF+L +L
Sbjct: 178 IDMMSQAIALSKRPH---------------------IIVATPGRLHDHLENTKGFSLRNL 216
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YL++DE DRLL + + +L++ + T+L
Sbjct: 217 KYLIMDEADRLLDMDFGPVIDKILKVIPRERR-------TYL------------------ 251
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L P+ + T+Y + L + K
Sbjct: 252 -------------FSATMTTKVAKLQRASLVSPVKVQMS-TKYDTVDGLVQLYMFFPFKN 297
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV L+ L + I+FT +V +RL +L G I + G QS R +L
Sbjct: 298 KDAYLVYLVNELSGKSMIIFTRTVYDANRLSIILRLLGFPSIPL---HGQLSQSTRLSSL 354
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+N+D P K YIHR GRTARAG+ G+ TL
Sbjct: 355 NQFKSGNRSILVATDVASRGLDIPTVDCVINFDLPTNSKDYIHRVGRTARAGRSGKAVTL 414
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++
Sbjct: 415 VTQYDVELLQRI 426
>gi|321473370|gb|EFX84337.1| hypothetical protein DAPPUDRAFT_209410 [Daphnia pulex]
Length = 592
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 209/467 (44%), Gaps = 116/467 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPT 65
P+Q A TI L RD+C + TG+GKT ++ LP+++ L R R LV++PT
Sbjct: 41 PIQSA----TIPVALLGRDVCGCAATGTGKTAAFMLPVLERLMYRPKVSATTRVLVLVPT 96
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+L +QV + +++ QF ++ +GLS
Sbjct: 97 RELGVQV------------------YQVSKQLSQFTNI-----------------QIGLS 121
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
+G + ++ E + L+ D+++ATPGRL+DH+ T
Sbjct: 122 IG------GLDLKVQEKV-------------------LRGNPDVVIATPGRLIDHLRNTP 156
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
F+LE + L++DE DR+L E + + + I
Sbjct: 157 SFSLEAIDVLILDEADRMLDEFFIEQVKEI----------------------------IM 188
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERLE 302
+CG +R M+ SAT++ + LA + L+ P+ + R + L +
Sbjct: 189 QCGRKRQ----------TMLFSATMSNEVRDLAAVSLNKPIKVFVNNNRDVAFNLRQEFV 238
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+ E + + L AL+ C+VF + HRL L G I++ E G
Sbjct: 239 RIRPNHEGDREAI-LCALVCRTFRNHCMVFVQTKMLCHRLHVQLGLLG---IRVGELHGN 294
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R + L+ F+E I +LVS+D RG+D+ GV V+NY P I+ YIHR GRTAR
Sbjct: 295 LSQPQRLEALRKFKEEDIDILVSTDVAARGLDIPGVQTVINYTMPPTIERYIHRVGRTAR 354
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
AG+ G +L + E K K+++++A+N P+ S IP+ ++E +
Sbjct: 355 AGRSGVSVSLAGEGERKVVKEIVKRANN---PVKSRLIPNEILEKYK 398
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 189/433 (43%), Gaps = 101/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
+ Q+ I L RD+ + TGSGKT ++ALP++Q L + R L A+V+ PTR+LA Q
Sbjct: 59 GIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQR-LFAVVLAPTRELAFQ 117
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
++ +VF A+ ++GL VG
Sbjct: 118 IH---------------------------------------EVFEALGASIGLKSCCVVG 138
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L ++P ++VATPGRL+DH+ T+GF +
Sbjct: 139 GVDMMTQAIALARKPH---------------------VVVATPGRLVDHLENTKGFHIRE 177
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
+LV+DE DR+L ++ + +L + + R
Sbjct: 178 ARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRR------------------------- 212
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
++ SAT+T KL + L P+ + + ++ P L L +K
Sbjct: 213 -----------TLLFSATMTSKVAKLQRASLTDPVKVEASD-KFTTPRTLVQQYLFIPAK 260
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YL L + +VF ++ + RL LL + G I + G Q R
Sbjct: 261 YKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICL---HGQMTQPKRLGA 317
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ G+ +L+++D +RG+D+ V+ V+N+D P++ K YIHR GRTARAG+ GR
Sbjct: 318 LHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIA 377
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ +++L
Sbjct: 378 MVTQYDVEVYQRL 390
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 190/432 (43%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 91 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 149
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
F A+ +G+ + VG
Sbjct: 150 GEQ---------------------------------------FEALGSGIGIKCCVVVGG 170
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 171 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 209
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 210 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 242
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 243 -----------FLFSATMTKKVKKLQRASLKDPVKIEVS-NKYQTVEQLQQSYLFIPVKY 290
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 291 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 347
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 348 NKFKTKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 407
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 408 VSQYDIELYQRI 419
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 153
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 154 G---------------------------------------EQFEALGSGIGIKCCVVVGG 174
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 175 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 213
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 246
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 247 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 294
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 295 KDVYLVHILNELSGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 351
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 352 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 411
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 412 VSQYDIELYQRI 423
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 195/459 (42%), Gaps = 111/459 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G P+Q + I L RD+ + TGSGKT ++ALPI+Q+L ++ + L L
Sbjct: 75 LGYKQPTPIQT----QAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLDKP-QPLFGL 129
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ A F A+
Sbjct: 130 VLAPTRELAAQIGQA---------------------------------------FEALGS 150
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L + VG + + L K+P ++VATPGRL+DH
Sbjct: 151 LISLRCAVVVGGLDMVSQSIALGKKPH---------------------VVVATPGRLLDH 189
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L+ FLP
Sbjct: 190 LEKTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILK---------------FLPRE--- 231
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
RR + SAT++ L + L PL ++ R K
Sbjct: 232 ----RRT----------------YLFSATMSSKVESLQRASLRDPLRVSVSSKREKTVAT 271
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKE 358
L LI K +YL+ L+ + I+FT +V RL LL FG + +
Sbjct: 272 LLQNPLIIPHMHKDVYLIYLVNEFAGQTTIIFTRTVNEAQRLSILLRTLSFGAIPL---- 327
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G QS+R L F+ +LV++D RG+D+ V+ V+NYD P TYIHR G
Sbjct: 328 -HGQLSQSMRLGALNKFKAKSRDILVATDVAARGLDIPEVDLVINYDLPGDSMTYIHRVG 386
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIH 456
RTARAG+ GR +++ + +V+ + ++ + A D P +
Sbjct: 387 RTARAGRSGRAISIVTQYDVELWMRIEKAALDGRKLPTY 425
>gi|302792278|ref|XP_002977905.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
gi|300154608|gb|EFJ21243.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
Length = 741
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 200/438 (45%), Gaps = 111/438 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT ++ALPI++ L R R +R
Sbjct: 133 LGYRQPTPIQAAC----IPLALAGRDICGSAVTGSGKTAAFALPILERLLFRPRRIPAIR 188
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q+ HS+ E QF +
Sbjct: 189 VLIITPTRELAVQL------------------HSMIEKLAQFTDIRCC------------ 218
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G SS E++ L++ DI+VATPGR++
Sbjct: 219 -----LVVG---GLSSKVQEVA----------------------LRTHPDIVVATPGRMI 248
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ T+ LE L LV+DE DRLL ++ + +++L PS
Sbjct: 249 DHLRNTQSVGLEELAILVLDEADRLLELGFREEIHELVKL---------------CPS-- 291
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT---TGETRY 295
R M+ SAT+T + ++L +L L P+ L+ + E
Sbjct: 292 ---------------------RRQTMLFSATMTDEVSELIKLSLKSPVRLSADPSTERPS 330
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E + + L +SL + K I+F+ + HRL L FG +K
Sbjct: 331 TLTEEVIRIRAGHEEDKEAIVLSLCSRSL-KSKTIIFSGTKVEAHRLKIL---FGLSGLK 386
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+AFR+ ++ L+++D RG+D+ GV +V+N + P IKTY+H
Sbjct: 387 SAELHGNLTQAQRLEALEAFRKQEVDFLIATDVAARGLDIIGVESVINLECPKEIKTYVH 446
Query: 416 RAGRTARAGQLGRCFTLL 433
R GRTARAG+ GR TL+
Sbjct: 447 RVGRTARAGRHGRSVTLM 464
>gi|302652935|ref|XP_003018306.1| DEAD/DEAH box helicase, putative [Trichophyton verrucosum HKI 0517]
gi|291181934|gb|EFE37661.1| DEAD/DEAH box helicase, putative [Trichophyton verrucosum HKI 0517]
Length = 812
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 168/342 (49%), Gaps = 47/342 (13%)
Query: 2 GISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V LRAL
Sbjct: 240 GYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAKLRAL 299
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+++PTR+L QV A C+ C GL ++ ++ + + V + +
Sbjct: 300 IIVPTRELVKQVRDA-CELCSSG-SGLRIGTAVGSTALKDEQAQIMEQISVYRPESTRSQ 357
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ S+ D I+E + K G C E VD+L+ TPGRL+DH
Sbjct: 358 NGTIMTADEWASFSLVDYIAEAEEYSKTLPGHCI-------ESSPCVDVLICTPGRLVDH 410
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL + + P+A GS
Sbjct: 411 IRSTKGFTLDSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PAATGS 460
Query: 241 LKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG---- 291
L+ + K YP +L K++LSAT+T+D KL L LH+P L + G
Sbjct: 461 LEQL--------IKALSYPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAEKD 512
Query: 292 ---------ETRYKLPERL-ESYKLICESKLKPLYLVALLQS 323
++ LP L ES + + KPLYL+ LLQS
Sbjct: 513 EAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 189/433 (43%), Gaps = 102/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
++ ++I L RD+ + TGSGKT ++ALP++Q L + + L LV+ PTR+LA Q
Sbjct: 75 SIQAKSIPVALQGRDVIGLAETGSGKTAAFALPMLQALLEKP-QPLFGLVLAPTRELAAQ 133
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ F A+ + L + VG
Sbjct: 134 IG---------------------------------------QTFEALGALISLRCAVIVG 154
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L K+P ++VATPGRL+DH+ T+GF+L
Sbjct: 155 GLDMVPQAIALGKKPH---------------------VIVATPGRLVDHLEKTKGFSLRT 193
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 194 LKYLVMDEADRLLDMDFGPSIDKLLK---------------FVPRE-------RRT---- 227
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
+ SAT++ L + L P+ ++ ++Y+ L + +
Sbjct: 228 ------------YLFSATMSSRVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYVFIPHI 275
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YL+ ++ + CIVFT +V T R+ LL G I + G QS R
Sbjct: 276 RKDTYLIHIINEFAGKSCIVFTRTVYETQRVAILLRTLGFGAIPLH---GQLSQSARLGA 332
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR G ++LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G +
Sbjct: 333 LNKFRGGTREILVATDVAARGLDIPKVDIVLNYDIPSDSKTYIHRVGRTARAGKSGVAIS 392
Query: 432 LLHKDEVKRFKKL 444
L+ + +++ F ++
Sbjct: 393 LVTQYDLELFTRI 405
>gi|388502288|gb|AFK39210.1| unknown [Lotus japonicus]
Length = 460
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 194/421 (46%), Gaps = 101/421 (23%)
Query: 24 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
+RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+LA Q++
Sbjct: 47 KRDIIGLAETGSGKTGAFALPILQALLATPQR-LFALVLTPTRELAYQIS---------- 95
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+ F A+ ++G+ + VG + + L
Sbjct: 96 -----------------------------EQFEALGSSIGVKCAVIVGGMDMMSQSIALA 126
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
K+P I++ATPGRL+DH+ T+GF+L + YLV+DE DR+
Sbjct: 127 KKPH---------------------IVIATPGRLVDHLENTKGFSLRSIQYLVMDEADRI 165
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L ++ L +L++ S ST+L
Sbjct: 166 LNMDFEVDLDKILKILPPS-----STRSTYL----------------------------- 191
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 323
SAT+T+ KL + L P+ + + +Y ++L+ L SK K +YLV++L
Sbjct: 192 --YSATMTKKVAKLQRASLRDPIKIEVSD-KYATVDKLQQTYLFIPSKFKDVYLVSILND 248
Query: 324 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 383
+ + IVF S+ +T RL L + G + + G Q+ R L F+ +L
Sbjct: 249 MSGKSIIVFASTCTTTLRLALLTRNLGFTTVPL---HGQMSQTKRLGALNKFKGKARSIL 305
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ T + + +++ +++
Sbjct: 306 IATDVASRGLDIPHVDVVINYDIPNHSKDYIHRVGRTARAGRSGKSITFVTQYDIELYQR 365
Query: 444 L 444
+
Sbjct: 366 I 366
>gi|384252067|gb|EIE25544.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 415
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 193/430 (44%), Gaps = 104/430 (24%)
Query: 15 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 74
QE P L D+ + TGSGKT ++A+PI+Q L + + ALV+ PTR+LALQ
Sbjct: 41 QEQAVPHLLA-DVIGLAQTGSGKTGAFAMPILQELLDTP-QANFALVLSPTRELALQ--- 95
Query: 75 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 134
IAE F A+ +G+ + VG
Sbjct: 96 ------------------IAEQ------------------FEALGAGIGVRCAVLVGGID 119
Query: 135 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 194
+ + L KRP I+V TPGR++DH++ T+GFTL+ L +
Sbjct: 120 MMAQAIALGKRPH---------------------IIVGTPGRVVDHLSNTKGFTLKALRH 158
Query: 195 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 254
LV+DE DRLL ++ + +L++
Sbjct: 159 LVLDEADRLLNMDFEQEIDQILKVI----------------------------------- 183
Query: 255 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 314
P R ++ SAT+T KL + L +P+ + + +Y+ + L L +K K
Sbjct: 184 --PRERRTQL-FSATMTTKVAKLQRACLQNPVKVEV-DAKYRTVDTLRQQYLFIPAKHKD 239
Query: 315 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
YL L L +VFT + ++T +L +L + G + I G Q R L
Sbjct: 240 CYLAYFLTELAGATFMVFTRTCDNTRKLALMLRNLGFDALPIH---GQMSQPKRLGALNK 296
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
F+ G+ +L ++D +RG+D+ V+ VVNYD P K Y+HR GRTARAG+ GR TL+
Sbjct: 297 FKAGERSILAATDVASRGLDIPAVDVVVNYDVPINSKDYVHRVGRTARAGRSGRSLTLVT 356
Query: 435 KDEVKRFKKL 444
+ +V++F+K+
Sbjct: 357 QYDVEQFQKI 366
>gi|327352045|gb|EGE80902.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 834
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 214/463 (46%), Gaps = 106/463 (22%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 325 GLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 384
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 385 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 416
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 417 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 444
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 445 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 489
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L+ P+ L + +
Sbjct: 490 QT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVG 526
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ I+F + + HR+ + FG + +K
Sbjct: 527 TLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRII---FGLMGLKA 583
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 584 AELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 643
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
GRTARAG+ GR TL + + K K ++ I S P
Sbjct: 644 VGRTARAGRSGRACTLAAEPDRKVVKAAVKTGRAQGAKIVSRP 686
>gi|239612877|gb|EEQ89864.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ER-3]
Length = 834
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 214/463 (46%), Gaps = 106/463 (22%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 325 GLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 384
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 385 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 416
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 417 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 444
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 445 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 489
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T + +KL ++ L+ P+ L + +
Sbjct: 490 QT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVG 526
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ +++ I+F + + HR+ + FG + +K
Sbjct: 527 TLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRII---FGLMGLKA 583
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 584 AELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 643
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
GRTARAG+ GR TL + + K K ++ I S P
Sbjct: 644 VGRTARAGRSGRACTLAAEPDRKVVKAAVKTGRAQGAKIVSRP 686
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 190/432 (43%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 91 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 149
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
F A+ +G+ + VG
Sbjct: 150 GEQ---------------------------------------FEALGSGIGIKCCVVVGG 170
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 171 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 209
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 210 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 242
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 243 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 290
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 291 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 347
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 348 NKFKTKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 407
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 408 VSQYDIELYQRI 419
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 196/452 (43%), Gaps = 103/452 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ + LV+ PTR
Sbjct: 72 YKAPTAIQTEAIPLALQNRDLIGLAETGSGKTAAFALPILQALMDKP-QPFFGLVLAPTR 130
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ A F A+ + +
Sbjct: 131 ELAYQISEA---------------------------------------FEALGSTISVRS 151
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + + KRP I+VATPGRL+DH+ T+G
Sbjct: 152 VVLVGGMDMVPQAIAIGKRPH---------------------IIVATPGRLLDHLENTKG 190
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + + +L++ E R TFL
Sbjct: 191 FSLRSLKYLVMDEADRLLDMDFGPIIDKILKVL--PRERR-----TFL------------ 231
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT++ L + L +PL ++ +Y+ L Y L
Sbjct: 232 -------------------FSATMSSKVEGLQRASLSNPLRVSVSSNKYQTVSTLLQYYL 272
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K ++L+ LL + I+FT +V T RL L G I + G QS
Sbjct: 273 FIPHKHKDVHLIWLLNEHVGQSVIIFTRTVHETMRLTILARALGFGAIALH---GQLSQS 329
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L FR +L+++D RG+D+ V+ V+NYD A KT++HR GRTARAG+
Sbjct: 330 ARLGALGKFRSRSRDILIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGRTARAGKS 389
Query: 427 GRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
G+ +L+ + +V+ + + ++KA + P + +
Sbjct: 390 GKAISLVTQYDVEVWLR-IEKALDRKLPEYKV 420
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 145
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 146 G---------------------------------------EQFEALGSGIGIKCCVVVGG 166
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 167 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 205
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 206 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 238
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 239 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 286
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 287 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 343
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 344 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 403
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 404 VSQYDIELYQRI 415
>gi|195332387|ref|XP_002032880.1| GM21012 [Drosophila sechellia]
gi|194124850|gb|EDW46893.1| GM21012 [Drosophila sechellia]
Length = 782
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 208/475 (43%), Gaps = 117/475 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVR 55
+G + P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+
Sbjct: 175 LGYTYPTPIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI- 229
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
R LV++PTR+L QV + + + QF S+
Sbjct: 230 -TRVLVLVPTRELGAQV------------------YQVTKQLCQFTSI------------ 258
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
VGLA+G + + + L + P DI++ATPG
Sbjct: 259 ---------DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPG 288
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T FTL+ + L++DE DR+L E + + +
Sbjct: 289 RLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI-------------------- 328
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE- 292
I C R M+ SAT+++ LA + L P+ F+ +
Sbjct: 329 --------INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQ 370
Query: 293 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
+ L + + E +P+ L +L+ + C+VF + + HRL LL G
Sbjct: 371 VAFNLRQEFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG-- 427
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
++ E G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P +
Sbjct: 428 -VRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEH 486
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
YIHR GRTARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 487 YIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 185/429 (43%), Gaps = 102/429 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + ++I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR
Sbjct: 95 FSKPTPIQSKSIPPALEGHDIIGLAQTGSGKTAAFAIPILNKLWEDQ-QPYYACILAPTR 153
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+K+ F ++ +G+
Sbjct: 154 ELA---------------------------------------QQIKETFDSLGSLMGVRS 174
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG ++ D+ EL+++P I++ATPGRLMDH+ T+G
Sbjct: 175 VCIVGGMNMMDQSRELMRKPH---------------------IIIATPGRLMDHLENTKG 213
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + L +L++ + D +T+L
Sbjct: 214 FSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT------QDRTTYL------------ 255
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T KL + L +P+ +Y+ E L +
Sbjct: 256 -------------------FSATMTSKIEKLQRASLTNPVKCAVS-NKYQTVETLVQTLM 295
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ LK YL+ LL + IVFT + + RL L N L G Q+
Sbjct: 296 VVPGGLKNTYLIYLLNEFIGKSIIVFTRTKANAERLSALSNL---LEFSSTALHGDLNQN 352
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R+ L F+ GK Q+LV+ D RG+D+ V+ V+NYD P K+YIHR GRTARAG+
Sbjct: 353 QRTGALDLFKAGKRQILVAIDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRS 412
Query: 427 GRCFTLLHK 435
G+ +L+ +
Sbjct: 413 GKSISLVSQ 421
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 190/438 (43%), Gaps = 108/438 (24%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
++ E+I L +DL + TGSGKT ++A+PI+Q L + L A ++ PTR+LA Q
Sbjct: 107 SIQVESIPVALEGKDLIGLAETGSGKTAAFAIPILQALWDNPT-GLFACILAPTRELAFQ 165
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
++ + F A+ +G+ + VG
Sbjct: 166 IS---------------------------------------EQFEALGGGIGVRSAVIVG 186
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L K+P ILVATPGRL+DH+ T+GF+L +
Sbjct: 187 GMDMMTQSVALGKKPH---------------------ILVATPGRLLDHLENTKGFSLRN 225
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE DRLL + L +L++ + RR
Sbjct: 226 LKYLVMDEADRLLDMDFGPILDKILKV----------------------IPQTRRT---- 259
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
+ SAT+T KL + L P+ ++ G ++Y L L K
Sbjct: 260 ------------YLFSATMTSKVEKLQRASLSSPVRISVG-SKYSTVSTLIQKFLFIPFK 306
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YLV L+ + I+F +V+ T RL LL H G + + +G QS R
Sbjct: 307 HKDTYLVYLMNEFAGQTTIIFCRTVQETSRLAILLRHLGFNAVPL---NGQMSQSARLGA 363
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNN-----VVNYDKPAYIKTYIHRAGRTARAGQL 426
L F+ G +LV++D RG+D+ + V+N+D KTYIHR GRTARAG+
Sbjct: 364 LNKFKSGSRNILVATDVAARGLDMHVSPDALLYCVLNHDLAQDSKTYIHRVGRTARAGRS 423
Query: 427 GRCFTLLHKDEVKRFKKL 444
GR +L+ + EV+ F ++
Sbjct: 424 GRSISLVTQYEVELFLRI 441
>gi|5901872|gb|AAD55444.1|AF181659_1 BcDNA.GM05306 [Drosophila melanogaster]
Length = 641
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 204/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + C QF ++
Sbjct: 236 VPTRELGAQVYQVTKQLC------------------QFTTI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQ----------TMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 145
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 146 G---------------------------------------EQFEALGSGIGIKCCVVVGG 166
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 167 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 205
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 206 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 238
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 239 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 286
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 287 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 343
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 344 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 403
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 404 VSQYDIELYQRI 415
>gi|403347814|gb|EJY73340.1| hypothetical protein OXYTRI_05530 [Oxytricha trifallax]
Length = 508
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 202/464 (43%), Gaps = 113/464 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E++ L +D+ + TGSGKT ++A+P++Q L + + A V+ PTR
Sbjct: 85 IQAESLQYTLKGKDIIGLAETGSGKTAAFAIPVIQQLLDNP-QPFFACVMSPTR------ 137
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
E+CVQ + + F AI +GL + VG
Sbjct: 138 ----------------------ELCVQ-----------IAEQFEAIGAGIGLRTAVLVGG 164
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K P +++ TPGR+ DH+ T+GF L+ L
Sbjct: 165 LDMVSQAIALSKNPH---------------------VVIGTPGRMADHLANTKGFHLKKL 203
Query: 193 CYLVVDETDRLLREAYQAWLPTVL-QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
+L+ DE DRLL ++ + +L Q+ +S N T+L
Sbjct: 204 KFLIFDEADRLLSMDFEKQINLILTQIPKSRN--------TYL----------------- 238
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
SAT+T KL + L+ P+ + ++YK + L + K
Sbjct: 239 --------------FSATMTSKVQKLQRASLNDPVKIEVS-SKYKTVDTLVQNYIFIPEK 283
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YLV LL +K I+FT++ + +L +L + L K +G Q+ R
Sbjct: 284 HKETYLVYLLTQFAGQKMIIFTTTCNQSMKLALILRN---LNFKAVNINGQLTQTQRLSA 340
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ + +L+++D +RG+D+ V+ V+N+D P + K Y+HR GRTARAG+ G+ T
Sbjct: 341 LNKFKANERNILIATDVASRGLDIPEVDFVINFDIPQHSKDYVHRVGRTARAGKTGKAIT 400
Query: 432 LLHKDEVKRFKKLLQKADN--------DSCPIHSIPSSLIESLR 467
+ + +V+ F+K+ Q D DS + S++E+ R
Sbjct: 401 FVTQYDVETFQKIEQLIDKKLDEYPGLDSKAALILTDSVVEATR 444
>gi|321257748|ref|XP_003193695.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317460165|gb|ADV21908.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 790
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 196/466 (42%), Gaps = 105/466 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-----AVRCLRALV 61
F + I L RD+ ++ TGSGKT ++ +PI++ L R C R LV
Sbjct: 224 FTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAAC-RVLV 282
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
+ PTR+LA+Q C+ K A+A
Sbjct: 283 LCPTRELAVQ-----CEAVGK----------------------------------ALAEK 303
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
GL V A+ L G+ + + L++ DIL+ATPGRL+DH+
Sbjct: 304 GGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIATPGRLIDHL 344
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
T FTL L LV+DE DR+L + L +
Sbjct: 345 TNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI-------------------------- 378
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 301
I+ C P R M+ SAT+T ++L +L L P+ + R
Sbjct: 379 --IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTAKGLT 426
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ + I + L+AL + EKCI+F S H++ + FG +K E G
Sbjct: 427 QEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFG---LKAAELHG 483
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R + L F+ + L+++D +RG+D++GV V+NYD P + Y HR GRTA
Sbjct: 484 NLTQEQRLQALNDFKASTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTA 543
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
RAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 544 RAGRKGRSISLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMK 589
>gi|195474630|ref|XP_002089594.1| GE19181 [Drosophila yakuba]
gi|194175695|gb|EDW89306.1| GE19181 [Drosophila yakuba]
Length = 782
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|395752428|ref|XP_003779421.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 2
[Pongo abelii]
Length = 796
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 210/476 (44%), Gaps = 89/476 (18%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 205 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 260
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ QF
Sbjct: 261 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 284
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 285 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 320
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS-DNENRFSDASTFLPSA 237
DH++ F L + L++DE D PT+ L S L
Sbjct: 321 DHLHNCPSFHLSSIEVLILDEADSPPVGTACPHAPTLWLLHLPFPQPGAISCPFRMLDEY 380
Query: 238 FGSL--KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
F + IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 381 FEEQMKEIIRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTD 430
Query: 296 KLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
P + + I ++ + + ALL + ++FT + + HR+ LL G
Sbjct: 431 VAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMG--- 487
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y
Sbjct: 488 LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHY 547
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 548 VHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 600
>gi|195581486|ref|XP_002080565.1| GD10546 [Drosophila simulans]
gi|194192574|gb|EDX06150.1| GD10546 [Drosophila simulans]
Length = 782
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 208/475 (43%), Gaps = 117/475 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVR 55
+G + P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+
Sbjct: 175 LGYTYPTPIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI- 229
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
R LV++PTR+L QV + + + QF S+
Sbjct: 230 -TRVLVLVPTRELGAQV------------------YQVTKQLCQFTSI------------ 258
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
VGLA+G + + + L + P DI++ATPG
Sbjct: 259 ---------DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPG 288
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI T FTL+ + L++DE DR+L E + + +
Sbjct: 289 RLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI-------------------- 328
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE- 292
I C R M+ SAT+++ LA + L P+ F+ +
Sbjct: 329 --------INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQ 370
Query: 293 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
+ L + + E +P+ L +L+ + C+VF + + HRL LL G
Sbjct: 371 VAFNLRQEFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG-- 427
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
++ E G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P +
Sbjct: 428 -VRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEH 486
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
YIHR GRTARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 487 YIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 194/444 (43%), Gaps = 107/444 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q A E L ERD+ + TGSGKT ++ALPI+Q+L + A + +L
Sbjct: 36 MGWRAPTPIQCAAVPE----ALRERDVIGLAQTGSGKTGAFALPILQSLLD-APQGFHSL 90
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA+Q IAE Q ++L
Sbjct: 91 ILSPTRELAMQ---------------------IAE---QIETL---------------GA 111
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
VG VG + + +L KRP ++V TPGR++DH
Sbjct: 112 GVGARTATLVGGVDMTTQAIKLGKRPH---------------------VIVGTPGRVVDH 150
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L LV+DE DRLL ++ + +L++ SD +
Sbjct: 151 LENTKGFSLRALKVLVLDEADRLLNLDFEEEIDKILRVIPSDRRTQL------------- 197
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T KL + L P+ + +Y E
Sbjct: 198 -------------------------FSATMTNKVAKLQRACLRDPVKVEV-SAKYSTVES 231
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ + L +K K Y L L IVF + ++T +L + + G + I
Sbjct: 232 LKQHYLFIPAKHKDCYATYLFNELSASTLIVFARTCDATRKLALIARNLGFGAVPI---H 288
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L+ F+ G+ +L+++D +RG+D+ V+ V+NYD P K Y+HR GRT
Sbjct: 289 GQMSQPKRIAALQKFKSGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRT 348
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G T++ + +V+ ++K+
Sbjct: 349 ARAGRSGLAVTMVTQYDVELYQKI 372
>gi|440636791|gb|ELR06710.1| hypothetical protein GMDG_00327 [Geomyces destructans 20631-21]
Length = 787
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 212/473 (44%), Gaps = 122/473 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRA 59
G S+ P+Q +TI L +D+ + TGSGKT ++ +P+++ L R V R
Sbjct: 282 GFSAPTPIQA----KTIPVALLGKDVVGGAVTGSGKTAAFIVPVLERLLYRPKKVPTSRV 337
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
+++PTR+LA+Q C H++A + + F
Sbjct: 338 AILMPTRELAIQ---------C---------HAVATKLASYTDIKFC------------- 366
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
LAVG S+ + +EL RP DI++ATPGR +D
Sbjct: 367 --------LAVGGLSLKIQEAELRLRP---------------------DIIIATPGRFID 397
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ + FT++ L LV+DE DR+L + + L +L T +P
Sbjct: 398 HMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPK--- 439
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
S +T M+ SAT+T +KL ++ L+ P+ L R +
Sbjct: 440 SRQT--------------------MLFSATMTSSVDKLIRVGLNRPVRLMVDAQRSTVTT 479
Query: 300 RLESYKLICESKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
++ + +L+P YL+ L Q + K IVF + HR + FG
Sbjct: 480 LVQEF-----VRLRPGREDKRMGYLLYLCQKVFHNKVIVFFRQKKEAHRARVI---FGLS 531
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
+K E G Q R +++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 532 GMKAAELHGSLSQEQRIASVEAFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQSLEI 591
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 465
Y+HR GRTARAG+ GR TL + + K K ++ A + I S +IES
Sbjct: 592 YLHRVGRTARAGRSGRACTLAAEPDRKVVKAAVKTARSQGA---KIASRVIES 641
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 189/429 (44%), Gaps = 103/429 (24%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q++
Sbjct: 566 EALPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAYQISQ- 623
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
QF+ L A+G+ VG +
Sbjct: 624 -----------------------QFEGL---------------GSAMGVRCVTIVGGLDM 645
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L KRP I+VATPGRL+DH+ T+GF+L L +L
Sbjct: 646 MAQSVALAKRPH---------------------IVVATPGRLIDHLENTKGFSLRGLKFL 684
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DRLL + + +L++ + +T+L
Sbjct: 685 VLDEADRLLDMDFGPIIDKILKIIPKER-------TTYL--------------------- 716
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
SAT+T KL + L +P+ + E +Y L Y L K +
Sbjct: 717 ----------FSATMTTKVAKLQRASLSNPVRVEVSE-KYSTVSTLLQYYLFIPLVQKDV 765
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
+L+ L +L + I+FT +V RL +L G + + G QS R L F
Sbjct: 766 HLIYLANTLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH---GQLSQSARLGALGKF 822
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ G ++LV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL+ +
Sbjct: 823 KSGGRKILVATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTLVTQ 882
Query: 436 DEVKRFKKL 444
+V+ +++
Sbjct: 883 YDVELIQRI 891
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 188/433 (43%), Gaps = 102/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
A+ + I L RD+ + TGSGKT ++ALPI+Q L + + L LV+ PTR+LA Q
Sbjct: 83 AIQAKAIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPLFGLVLAPTRELAAQ 141
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ + F A+ + L + VG
Sbjct: 142 IGQS---------------------------------------FEALGALISLRCAVIVG 162
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L K+P I+VATPGRL+DH+ T+GF+L
Sbjct: 163 GLDMVPQAIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLRS 201
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 202 LKYLVMDEADRLLDMDFGPSIDKILK---------------FIPRE-------RRT---- 235
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
+ SATL+ L + L P+ ++ ++Y+ L + ++ K
Sbjct: 236 ------------YLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYILVPHK 283
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YL+ L+ + I+FT +V T R+ LL G I + G QS R
Sbjct: 284 RKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPLH---GQLSQSSRLGA 340
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ G ++LV++D RG+D+ V+ V+N D P KTYIHR GRTARAG+ G
Sbjct: 341 LNKFKGGSREILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGRTARAGKSGIAIN 400
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ ++++
Sbjct: 401 IVTQYDVEIYQRI 413
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 205/458 (44%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +I P L +D+ + TGSGKT ++A+PI+ +L + + A ++ PTR+LA
Sbjct: 100 IQSRSIPPALKGKDIIGLAQTGSGKTAAFAIPILNSLWHDQ-QPYYACILSPTRELA--- 155
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 156 ------------------------------------QQIKETFDSLGSLMGVRSVCIVGG 179
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ TPGRLMDH+ TRGF+L +L
Sbjct: 180 MNMMDQARDLMRKPH---------------------IIIGTPGRLMDHLENTRGFSLRNL 218
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L++ + +T+L
Sbjct: 219 KYLVMDEADRLLDMEFGPVLDRILKIIPTQGR------TTYL------------------ 254
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T +KL + L +P+ T+Y+ + L ++ +
Sbjct: 255 -------------FSATMTSKIDKLQRASLTNPVKCAV-STKYQTVDTLVQTLMVVPGGV 300
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV LL + I+FT + + R+ L N L+ G Q+ R+ L
Sbjct: 301 KDTYLVYLLNEFIGKSMIIFTRTKANAERISGLANL---LQFSATALHGDLNQNQRTGAL 357
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 358 DLFKAGRRSILVATDVAARGLDIPSVDVVINYDIPVDSKSYIHRVGRTARAGRSGKSISL 417
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P ++ ++ +LR
Sbjct: 418 VSQYDLELILRIEEVLGK----KLPKENVDKDIVLALR 451
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 211/473 (44%), Gaps = 118/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R A
Sbjct: 201 LGFTTPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAA 256
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL ++ PTR+LA+Q C + +A H+
Sbjct: 257 TRCL---ILAPTRELAVQ---------CYEVGSKLAAHT--------------------- 283
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ L VG S+ + + L RP D+++AT
Sbjct: 284 ---------DIRFALVVGGLSVKAQETNLRTRP---------------------DVVIAT 313
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + FTL+ L LV+DE DR+L E+ FSD T
Sbjct: 314 PGRLIDHLRNSPTFTLDALDILVLDEADRML-------------------EDGFSDELTE 354
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+ I C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 355 I---------ITSC---------PTSRQT-MLFSATMTDSVDELVRMSLNKPVRLFVDPK 395
Query: 294 RYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
R L+ + + K + LVAL + + + I+F S + H++ + + G
Sbjct: 396 RSTARGLLQEFVRVRAGKETERSALLVALCKRSFKARAIIFYRSKKLAHQMRIMFSLLG- 454
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD P +
Sbjct: 455 --MKCDELHGDLTQEQRLKALQQFRDGHVDYLMATDLASRGLDIKGIETVINYDMPGTLS 512
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH-SIPSSLI 463
Y+HR GRTARAG+ GR TL+ + + K K ++ + ++ H +P+ ++
Sbjct: 513 QYLHRVGRTARAGKKGRSVTLVGEADRKLLKAAIKHSSSEDQVRHRQVPTEVL 565
>gi|195024659|ref|XP_001985916.1| GH21077 [Drosophila grimshawi]
gi|193901916|gb|EDW00783.1| GH21077 [Drosophila grimshawi]
Length = 790
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP V+ L +N+A+ R LV+
Sbjct: 183 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTVERLLYRPLNNKAI--TRVLVL 236
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 237 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 259
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 260 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 296
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T F+L+ + L++DE DR+L E + + +
Sbjct: 297 NTPSFSLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 329
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 330 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 378
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 379 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 434
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 435 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 494
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ S IP +I+ R
Sbjct: 495 TARAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIDKYR 541
>gi|194757571|ref|XP_001961038.1| GF13667 [Drosophila ananassae]
gi|190622336|gb|EDV37860.1| GF13667 [Drosophila ananassae]
Length = 782
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 94 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 152
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 153 G---------------------------------------EQFEALGSGIGIKCCVVVGG 173
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 174 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 212
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 213 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 245
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 246 -----------FLFSATMTKKVKKLQRASLKDPVKVEV-SNKYQTVEQLQQSYLFIPVKY 293
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 294 KDVYLVHILNDLAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 350
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 351 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 410
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 411 VTQYDIELYQRI 422
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +D+ + TGSGKT +++LPI+QTL + ALV+ PTR+LA Q+
Sbjct: 64 IQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLWENP-QPFFALVLAPTRELAYQI 122
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ QV ++ +G+ + VG
Sbjct: 123 SQ-----------------------------------QV----TSLGSGIGVRTAVLVGG 143
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP ++VATPGRLMDH+ T+GF+L+ L
Sbjct: 144 MDMMSQSIALSKRPH---------------------VIVATPGRLMDHLENTKGFSLKSL 182
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + VL++ + +T+L
Sbjct: 183 KYLVMDEADRLLDLDFGPIIDKVLKVIPKER-------NTYL------------------ 217
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L+ P+ + ++Y L + L+ K
Sbjct: 218 -------------FSATMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKN 263
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ L L I+FT +V + RL +L G I + G QS+R +L
Sbjct: 264 KDAYLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLH---GQMTQSLRLASL 320
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G+ TL
Sbjct: 321 NKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITL 380
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++
Sbjct: 381 VTQYDVEILQRI 392
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 178/421 (42%), Gaps = 102/421 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +++I L RD+ + TGSGKT ++ALP++Q L + L A+V+ PTR+LA
Sbjct: 87 IQEKSIPLALAGRDVIGLAETGSGKTAAFALPVLQALLEKP-SGLFAVVMAPTRELA--- 142
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+ F A+ + L + VG
Sbjct: 143 ------------------------------------AQIAQTFEALGSLINLRCAVIVGG 166
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P ++VATPGRL+DH+ T+GF+L L
Sbjct: 167 LDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLRSL 205
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + +L+ F+P ER
Sbjct: 206 KYLVLDEADRLLDMDFGPSIDKILK---------------FIPR-------------ERH 237
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L P ++ Y++ L L L
Sbjct: 238 ----------TYLFSATMSSKVESLQRASLKDPARVSVQSNGYQVVSTLLQNFLFIPHAL 287
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +Y V L+ S + IVF +V T RL LL G + + G QS R L
Sbjct: 288 KDVYCVHLINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPLH---GQLSQSARLGAL 344
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+ GR +L
Sbjct: 345 NKFRAGSRDILVATDVAARGLDIPNVDVVINYDLPQDSKTYIHRVGRTARAGKSGRALSL 404
Query: 433 L 433
+
Sbjct: 405 V 405
>gi|409083507|gb|EKM83864.1| hypothetical protein AGABI1DRAFT_117335, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 701
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 204/460 (44%), Gaps = 123/460 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 212 LGFNKPTPIQAS----TIPVALLGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGKKAAA 267
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+R LV++PTR+LA+Q C + ++ H+ +C
Sbjct: 268 IRCLVLVPTRELAVQ---------CYEVGTKLSIHTDIRLC------------------- 299
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + ++L RP DI++ATPGR
Sbjct: 300 -----------LVVGGLSLKSQEADLRSRP---------------------DIVIATPGR 327
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DHI + F+L+ L LV+DE DR+L E FSD T +
Sbjct: 328 LIDHIRNSASFSLDALDILVIDEADRILSEG-------------------FSDELTEI-- 366
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
I+ C P R M+ SAT+T ++L ++ L P+ L +
Sbjct: 367 -------IKSC---------PRSRQT-MLFSATMTDSVDELVRVSLEKPVRL------FV 403
Query: 297 LPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
P+R + LI E + LV L + + + IVF S + H++ + +
Sbjct: 404 DPKRTTARGLIQEFVRVRAGKEAERSAMLVTLCRRTFKRRVIVFLRSKKLAHQMRIVFSL 463
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G +K +E G Q R + L+ FR+ + L+++D +RG+D++GV V+NYD P
Sbjct: 464 LG---MKCEELHGDLSQEQRLRALQLFRDDAVDFLMATDLASRGLDIKGVETVINYDMPT 520
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+ Y+HR GRTARAG+ GR TL+ + + K + ++ A
Sbjct: 521 QLAQYLHRVGRTARAGRGGRAVTLVGEADRKMLRAAIKHA 560
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 189/433 (43%), Gaps = 102/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
++ ++I L RD+ + TGSGKT ++ALPI+Q L + + L LV+ PTR+LA Q
Sbjct: 81 SIQAKSIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPLFGLVLAPTRELAAQ 139
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ + F A+ + L + VG
Sbjct: 140 IGQS---------------------------------------FEALGALISLRCAVIVG 160
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L K+P I+VATPGRL+DH+ T+GF+L
Sbjct: 161 GLDMVPQAIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLRS 199
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 200 LKYLVMDEADRLLDMDFGPSIDKILK---------------FIPRE-------RRT---- 233
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
+ SATL+ L + L P+ ++ ++Y+ L + + K
Sbjct: 234 ------------YLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYIFVPHK 281
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YL+ L+ + I+FT +V T R+ LL G I + G QS R
Sbjct: 282 RKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPLH---GQLSQSSRLGA 338
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ G ++LV++D RG+D+ V+ V+N D P KTYIHR GRTARAG+ G +
Sbjct: 339 LNKFKGGSREILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGRTARAGKSGIAIS 398
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ ++++
Sbjct: 399 IVTQYDVEIYQRI 411
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESPQRYF-ALVLTPTRELAFQI 153
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 154 G---------------------------------------EQFEALGSGIGIKCCVVVGG 174
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 175 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 213
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 246
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 247 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 294
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 295 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 351
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 352 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITI 411
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 412 VSQYDIELYQRI 423
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESPQRYF-ALVLTPTRELAFQI 153
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + VG
Sbjct: 154 G---------------------------------------EQFEALGSGIGIKCCVVVGG 174
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 175 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 213
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 246
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 247 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 294
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 295 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 351
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 352 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITI 411
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++++
Sbjct: 412 VSQYDIELYQRI 423
>gi|312375048|gb|EFR22493.1| hypothetical protein AND_15188 [Anopheles darlingi]
Length = 879
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 212/468 (45%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P+Q + TI L RD+C + TG+GKT +Y LP ++ L N A R LV++P
Sbjct: 233 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYKPNAAQAVTRVLVLVP 288
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L QV + +A+ QF +
Sbjct: 289 TRELGAQV------------------YQVAKQLTQF---------------------TNV 309
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VG+A+G G+ ++ + L++ DI++ATPGRL+DHI T
Sbjct: 310 EVGIAIG-------------------GLDVKAQEAV--LRTNPDIVIATPGRLIDHIKNT 348
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + + I
Sbjct: 349 PSFSLDSIEILILDEADRMLDEYFAEQMKEI----------------------------I 380
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGET-RYKLPERL 301
R C R M+ SAT+T++ LA + L P +F+ +T + L +
Sbjct: 381 RSCSATRQT----------MLFSATMTEEVKDLAAVSLKKPVKIFVNNNQTVAFNLRQEF 430
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E+ +P+ L AL+ + C+VF + + HRL LL L +K E G
Sbjct: 431 IRVREGREADREPI-LAALVCRTFHDHCMVFVQTKRTAHRLRILLGL---LGVKAGELHG 486
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q+ R ++LK F++ +I VLV++D RG+D+ GV V+N+ PA ++ YIHR GRTA
Sbjct: 487 DLTQAQRLESLKQFKDEQIDVLVATDVAARGLDISGVTTVINFVMPATLEHYIHRVGRTA 546
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
RAG+ G +L + E + K +++ A N P+ + IP +I+ R
Sbjct: 547 RAGRAGVSVSLAGELERRIVKDIVKNAVN---PVKNRIIPGEIIDKYR 591
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 200/464 (43%), Gaps = 109/464 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + + I P L D+ + TGSGKT ++A+PI+ L + + A ++ PTR
Sbjct: 86 FTKPTPIQSKAIPPALQGNDIIGLAQTGSGKTAAFAIPILNQLWHDQ-QPYYACILAPTR 144
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+K+ F ++ +G+
Sbjct: 145 ELA---------------------------------------QQIKETFDSLGSLMGVRS 165
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+G ++ D+ +L+++P I++ATPGRLMDH+ T+G
Sbjct: 166 TCIMGGMNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKG 204
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + A L +L
Sbjct: 205 FSLRKLRFLVIDEADRLLDMEFGAVLDRIL------------------------------ 234
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
K+ P + SAT+T +KL + L +P+ + +Y+ + L +
Sbjct: 235 -------KNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCSVS-NKYQTVDTLIQTLM 286
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ LK YL+ LL + IVFT + + R+ L N L G Q+
Sbjct: 287 VVPGGLKNTYLIYLLNEFIGKSTIVFTRTKANAERISGLCNL---LEFSATALHGDLNQN 343
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+
Sbjct: 344 QRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRS 403
Query: 427 GRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
G+ +L+ + +++ R + +L K P I ++I SLR
Sbjct: 404 GKSISLVSQYDLELILRIEDVLGK----KLPKEDINKNMILSLR 443
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 178/421 (42%), Gaps = 102/421 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +++I L RD+ + TGSGKT ++ALP++Q L + L A+V+ PTR+LA
Sbjct: 87 IQEKSIPLALEGRDVIGLAETGSGKTAAFALPVLQALLEKP-SGLFAVVMAPTRELA--- 142
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+ F A+ + L + VG
Sbjct: 143 ------------------------------------AQIAQTFEALGSLINLRCAVIVGG 166
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P ++VATPGRL+DH+ T+GF+L L
Sbjct: 167 LDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLRSL 205
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + +L+ F+P ER
Sbjct: 206 KYLVLDEADRLLDMDFGPSIDKILK---------------FIPR-------------ERH 237
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L P ++ Y++ L L L
Sbjct: 238 ----------TYLFSATMSSKVESLQRASLKDPARVSVQSNGYQVVSTLLQNYLFIPHAL 287
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +Y V L+ S + IVF +V T RL LL G + + G QS R L
Sbjct: 288 KDVYCVHLINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPLH---GQLSQSARLGAL 344
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+ GR +L
Sbjct: 345 NKFRAGSRDILVATDVAARGLDIPNVDVVINYDLPQDSKTYIHRVGRTARAGKSGRALSL 404
Query: 433 L 433
+
Sbjct: 405 V 405
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 203/463 (43%), Gaps = 111/463 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L D+ + TGSGKT ++ LPI+Q+L R + ++V+ PTR
Sbjct: 55 IQREAIPIALRGGDIIGLAETGSGKTGAFILPILQSLLENQSR-MYSVVLAPTR------ 107
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
E+CVQ + + F+A+ + L V VG
Sbjct: 108 ----------------------ELCVQ-----------ISEQFSALGSLISLQVANIVGG 134
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ ++ L K+P I+VA+PGRL+DH+ T+GF + +
Sbjct: 135 MDMVNQALSLAKKPH---------------------IIVASPGRLVDHLENTKGFNISSV 173
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL ++ L K I C R
Sbjct: 174 KYLVMDEADRLLSMDFEIALT----------------------------KIIEACPKNRN 205
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T KL ++ L +P+ + T+Y E L Y + K
Sbjct: 206 ----------TYLFSATMTTKVAKLQRVSLKNPVKICVN-TKYDTAENLLQYYMFIPFKF 254
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV L+Q+L + I+FT++ S R L+ G + + G Q+ R L
Sbjct: 255 KWSYLVILVQNLSQYTGIIFTNTCISCKRGALLMQQLGFSSVCLH---GRMNQTQRLAAL 311
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ + +L +++ +RG+D+ V+ V+N+D P K Y+HR GRTARAG+ G+ +L
Sbjct: 312 NQFKSKQRHLLFTTEVGSRGLDIPHVDFVINFDIPMSSKDYVHRVGRTARAGRSGKAISL 371
Query: 433 LHKDEVKRF--------KKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +V+ F KKL + +D + + +I ++E+LR
Sbjct: 372 VTQYDVEMFQRVEFALNKKLDEYSDINKDQMMAIHGKVLEALR 414
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +D+ + TGSGKT +++LPI+QTL + ALV+ PTR+LA Q+
Sbjct: 64 IQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLWENP-QPFFALVLAPTRELAYQI 122
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ Q SL +G+ + VG
Sbjct: 123 SQ------------------------QITSL---------------GSGIGVRTAVLVGG 143
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP ++VATPGRLMDH+ T+GF+L+ L
Sbjct: 144 MDMMSQSIALSKRPH---------------------VIVATPGRLMDHLENTKGFSLKSL 182
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + VL++ + +T+L
Sbjct: 183 KYLVMDEADRLLDLDFGPIIDKVLKVIPKER-------NTYL------------------ 217
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L+ P+ + ++Y L + L+ K
Sbjct: 218 -------------FSATMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKN 263
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ L L I+FT +V + RL +L G I + G QS+R +L
Sbjct: 264 KDSYLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLH---GQMTQSLRLASL 320
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G+ TL
Sbjct: 321 NKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITL 380
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++
Sbjct: 381 VTQYDVEILQRI 392
>gi|194863559|ref|XP_001970500.1| GG23340 [Drosophila erecta]
gi|190662367|gb|EDV59559.1| GG23340 [Drosophila erecta]
Length = 782
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSVEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 215/488 (44%), Gaps = 131/488 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G ++ P+Q A TI GL +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 232 LGFNTPTPIQAA----TIPVGLLGKDVVGNAVTGSGKTAAFIIPMIERLLYRDKGKKAAA 287
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R L+++PTR+LA+Q C + + H+ + C
Sbjct: 288 TRCLILVPTRELAVQ---------CYEVGKKLGTHTDIQFC------------------- 319
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + L RP D+++ATPGR
Sbjct: 320 -----------LIVGGLSLKSQEVALRARP---------------------DVVIATPGR 347
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ + FTL+ L LV+DE DR+L + + L ++Q
Sbjct: 348 LIDHLRNSPSFTLDALDILVLDEADRMLSDGFADELTEIIQ------------------- 388
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
S T R+ M+ SAT+T ++L ++ L+ P+ L +
Sbjct: 389 ---SCPTSRQT----------------MLFSATMTDSVDELVKMSLNKPVRL------FV 423
Query: 297 LPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
P+R + L+ E + LVAL + + ++F S + H++ + +
Sbjct: 424 DPKRSTARGLVQEFVRVRAGKESDRSALLVALCKRTFKSGVLIFFRSKKLAHQVRIMFSL 483
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G + +E G Q R K+L+ FR+G + L+++D +RG+D++G++ V+N+D P
Sbjct: 484 LG---MSCEELHGDLSQEQRLKSLQLFRDGAVDYLMATDLASRGLDIKGIDTVINFDMPG 540
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ-KADNDSCPIHSIPSSLI---- 463
+ Y+HR GRTARAG+ GR TL+ + + K K ++ A D ++P ++
Sbjct: 541 QLAQYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHSAGADQVRHRTVPPEIVAKYV 600
Query: 464 ---ESLRP 468
+SL+P
Sbjct: 601 KKLDSLKP 608
>gi|195431333|ref|XP_002063697.1| GK15774 [Drosophila willistoni]
gi|194159782|gb|EDW74683.1| GK15774 [Drosophila willistoni]
Length = 792
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 203/466 (43%), Gaps = 113/466 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q + TI L RD+C + TG+GKT +Y LP ++ L R + R LV++P
Sbjct: 184 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKTITRVLVLVP 239
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L QV + + + QF S+
Sbjct: 240 TRELGAQV------------------YQVTKQLCQFTSI--------------------- 260
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VGLA+G + + + L + P DI++ATPGRL+DHI T
Sbjct: 261 DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIKNT 299
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + + I
Sbjct: 300 PSFSLDSIEVLILDEADRMLDEYFAEQMKEI----------------------------I 331
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPERL 301
C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 332 NSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 381
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E +P+ L +L+ + C+VF + + HRL LL G L ++ E G
Sbjct: 382 IRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILL---GLLNVRAGELHG 437
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GRTA
Sbjct: 438 NLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTA 497
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
RAG+ G +L + E K K +++ A++ S IP +IE R
Sbjct: 498 RAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIEKYR 542
>gi|426201453|gb|EKV51376.1| hypothetical protein AGABI2DRAFT_114110 [Agaricus bisporus var.
bisporus H97]
Length = 754
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 204/460 (44%), Gaps = 123/460 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 212 LGFNKPTPIQAS----TIPVALLGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGKKAAA 267
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+R LV++PTR+LA+Q C + ++ H+ +C
Sbjct: 268 IRCLVLVPTRELAVQ---------CYEVGTKLSIHTDIRLC------------------- 299
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + ++L RP DI++ATPGR
Sbjct: 300 -----------LVVGGLSLKSQEADLRSRP---------------------DIVIATPGR 327
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DHI + F+L+ L LV+DE DR+L E FSD T +
Sbjct: 328 LIDHIRNSASFSLDALDILVIDEADRILSEG-------------------FSDELTEI-- 366
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
I+ C P R M+ SAT+T ++L ++ L P+ L +
Sbjct: 367 -------IKSC---------PRSRQT-MLFSATMTDSVDELVRVSLEKPVRL------FV 403
Query: 297 LPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
P+R + LI E + LV L + + + IVF S + H++ + +
Sbjct: 404 DPKRTTARGLIQEFVRVRAGKEAERSAMLVTLCRRTFKRRVIVFLRSKKLAHQMRIVFSL 463
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G +K +E G Q R + L+ FR+ + L+++D +RG+D++GV V+NYD P
Sbjct: 464 LG---MKCEELHGDLSQEQRLRALQLFRDDAVDFLMATDLASRGLDIKGVETVINYDMPT 520
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+ Y+HR GRTARAG+ GR TL+ + + K + ++ A
Sbjct: 521 QLAQYLHRVGRTARAGRGGRAVTLVGEADRKMLRAAIKHA 560
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 191/439 (43%), Gaps = 108/439 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G ++ P+Q + I L RDL + TGSGKT ++ LP++Q L ++ + +L
Sbjct: 46 LGYTAPTPIQ----ERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQALMDKP-QQFHSL 100
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q+ H++ A+
Sbjct: 101 ILAPTRELAQQIA-----------------HTVE----------------------ALGA 121
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + L +G + + L K+P ++VATPGRL+DH
Sbjct: 122 RISVRCTLLIGGMDMISQAIALGKKPH---------------------VIVATPGRLLDH 160
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L+L LP
Sbjct: 161 LENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRL---------------LP----- 200
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
K K Y + SAT++ L + L P+ ++ +
Sbjct: 201 -------------KRKTY------LFSATMSSKVESLQRASLSDPVRVSVSTKNQTASKL 241
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+SY L K K YLV LL + I+FT +V T RL +L + G I I
Sbjct: 242 LQSY-LFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIH--- 297
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R +L FR +L+++D RG+D+ V+ V+NYD P KTYIHR GRT
Sbjct: 298 GQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRT 357
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G F+ + + EV+
Sbjct: 358 ARAGKSGIAFSFVTQYEVE 376
>gi|268563805|ref|XP_002638939.1| Hypothetical protein CBG22166 [Caenorhabditis briggsae]
Length = 753
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 215/493 (43%), Gaps = 133/493 (26%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRA 59
G S P+Q Q I L +D+C + TG+GKT ++ LPI++ + R C R
Sbjct: 162 GYSDPTPIQ----QACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRV 217
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV++PTR+LA+ QV VF ++
Sbjct: 218 LVLVPTRELAI---------------------------------------QVFQVFRKLS 238
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
+ L V L G G+ ++ L+S D++VATPGRL+D
Sbjct: 239 TFIQLEVCLCAG-------------------GLDLKAQEAA--LRSGPDVVVATPGRLID 277
Query: 180 HINATRGFTL----------------------EHLCYLVVDETDRLLREAYQAWLPTVLQ 217
H++ + F L ++L LV+DE DR+L EA++ + +++
Sbjct: 278 HLHNSPSFNLASIEVFLSLEKEKFRNSEIQESKNLKVLVLDEADRMLEEAFRDQMNELIR 337
Query: 218 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 277
L ENR + ++ SAT+T++ ++L
Sbjct: 338 LC---AENRQT-----------------------------------LLFSATMTEEIDEL 359
Query: 278 AQLDLHHPLFLTTGE---TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
A + L P+ + E T KL + + E+ + + + AL+ + IVF
Sbjct: 360 ASMSLKKPVKIFINENTDTALKLRQEFIRIRAGRETDRESM-VAALVTRTFQTNTIVFVR 418
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
+ + R+ LL G IK+ + Q R ++L F++G+I VLVS+D +RG+D
Sbjct: 419 TKKDCQRMQILLGLLG---IKVGQMQSSLTQGQRIESLSKFKKGEIDVLVSTDLASRGLD 475
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
+EGV V+N + P IK YIHR GRTARAG+ GR +L+ ++E K K+++ + +
Sbjct: 476 IEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEEERKLLKEIVNSNADRTLK 535
Query: 455 IHSIPSSLIESLR 467
+ ++E+ R
Sbjct: 536 QRLVAPEVVEAYR 548
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 192/440 (43%), Gaps = 112/440 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q A TI GL +D+ + TGSGKT ++ +PI++ L + + R
Sbjct: 238 LGYTKPSPIQSA----TIPIGLLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPANIASTR 293
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+LA+QV+ DV I
Sbjct: 294 VIVLTPTRELAIQVS---------------------------------------DVGKRI 314
Query: 119 APAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
V GL+ GLAVG ++ + EL RP D+++ATPGR
Sbjct: 315 GKYVNGLTFGLAVGGLNLRQQEQELKTRP---------------------DVVIATPGRF 353
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DHI + F ++ + LV+DE DR+L + +Q L ++ L LP+
Sbjct: 354 IDHIRNSASFNVDSVEVLVIDEADRMLEDGFQEELNEIMSL---------------LPTK 398
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
+L + SAT+ +L L L P+ + +
Sbjct: 399 RQTL-----------------------LFSATMNSKIKQLISLSLRRPVRIMINPPKQAA 435
Query: 298 PERLESYKLICESK-LKP---LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
+ + I + LKP YL+ L S +++ +VF S E HRL ++ G L
Sbjct: 436 ARLTQEFVRIRKRDLLKPALLYYLIRKLDSSSQKRIVVFVSRKEMAHRLRIIM---GLLG 492
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+K+ E G Q R +++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y
Sbjct: 493 MKVAELHGSLTQEQRLQSVNQFKSLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIY 552
Query: 414 IHRAGRTARAGQLGRCFTLL 433
+HR GRTARAG+ GR T +
Sbjct: 553 LHRVGRTARAGREGRSVTFV 572
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 211/467 (45%), Gaps = 111/467 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT ++ALP+++ L R R +R
Sbjct: 146 LGYREPTPIQAAC----IPLALTGRDICGSAVTGSGKTGAFALPMLERLLYRPRRIPAIR 201
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+QV HS+ + QF DV +AI
Sbjct: 202 CLILTPTRELAVQV------------------HSMVQKLAQF-----------TDVTSAI 232
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG G SS E++ L RP DI+VATPGR++
Sbjct: 233 V------VG---GLSSKVQEVA-LRARP---------------------DIVVATPGRML 261
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L LV+DE DRLL L T+ +E
Sbjct: 262 DHLQNSLSVGLEDLSILVLDEADRLLE----------LGFTQEVHE-------------- 297
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
+R+C P R M+ SAT+T++ + L L L+ P+ L+ + +
Sbjct: 298 ----LVRQC---------PKRRQT-MLFSATMTEEVSNLINLSLNSPVRLSADPSTKRPV 343
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E+ K L+AL +EK I+F+ HRL L FG +K
Sbjct: 344 SLSEEVVKIRPALEND-KEAVLLALCTRTFKEKVIIFSGMKVEAHRLKIL---FGLAGLK 399
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q++R L++FR+ ++ L+++D RG+D+ GV V+N+ P+ I Y+H
Sbjct: 400 AAELHGNLTQAMRLDALESFRKQEVDFLIATDVAARGLDIVGVETVINFHCPSDITVYVH 459
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 462
R GRTARAG+ G T + + E K + +KA + P+S+
Sbjct: 460 RVGRTARAGRKGCAVTFVTERERSLLKAIAKKAGSQLQNRQVAPTSI 506
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 203/464 (43%), Gaps = 109/464 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + I P L D+ + TGSGKT ++A+PI+ L + A V+ PTR
Sbjct: 93 FTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILNKLWEDQ-QPYYACVLAPTR 151
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+K+ F ++ +G+
Sbjct: 152 ELA---------------------------------------QQIKETFDSLGSLMGVRT 172
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG ++ D+ +L+++P I++ATPGRLMDH+ T+G
Sbjct: 173 TCIVGGMNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKG 211
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L++L +LV+DE DRLL + L +L++ + +T+L
Sbjct: 212 FSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTKGR------TTYL------------ 253
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T +KL + L +P+ +Y+ + L +
Sbjct: 254 -------------------FSATMTSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLM 293
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ LK +L+ LL + I+FT + + RL L N L G Q+
Sbjct: 294 VVPGGLKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQN 350
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R+ L F+ GK +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+
Sbjct: 351 QRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRS 410
Query: 427 GRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 411 GKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 450
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 184/429 (42%), Gaps = 102/429 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + I P L RD+ + TGSGKT ++A+PI+ L + A V+ PTR
Sbjct: 92 FDKPTPIQARAIPPALEGRDIIGLAQTGSGKTAAFAIPILNRLWEDK-QPYYACVLAPTR 150
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q K+ F ++ +G+
Sbjct: 151 ELA---------------------------------------QQTKETFDSLGALMGVRS 171
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG ++ D+ EL+++P I++ATPGRLMDH+ T+G
Sbjct: 172 TCIVGGMNMMDQARELMRKPH---------------------IIIATPGRLMDHLENTKG 210
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + L +L++ + D +T+L
Sbjct: 211 FSLRKLRFLVMDEADRLLDMEFGPVLDKILKVIPT------QDRTTYL------------ 252
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T +KL + L P+ +Y+ + L +
Sbjct: 253 -------------------FSATMTSKIDKLQRASLTEPVKCAVS-NKYQTVDTLVQTLM 292
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ S LK YL+ LL + I+FT + + RL L N L G Q+
Sbjct: 293 VVPSGLKNTYLIYLLNENIGKTVIIFTRTKANAERLSALCNL---LEFNATALHGDLNQN 349
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+
Sbjct: 350 QRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRS 409
Query: 427 GRCFTLLHK 435
G+ +L+ +
Sbjct: 410 GKSISLVSQ 418
>gi|21356161|ref|NP_651970.1| Rs1 [Drosophila melanogaster]
gi|7304081|gb|AAF59119.1| Rs1 [Drosophila melanogaster]
gi|28626484|gb|AAO49161.1| LD15481p [Drosophila melanogaster]
Length = 782
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF ++
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTTI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|440799062|gb|ELR20123.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 762
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 215/481 (44%), Gaps = 112/481 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL--R 58
+G PVQ + I L +D+C ++ TGSGKT S+ LPI++ L +R R + R
Sbjct: 211 LGYDRPTPVQ----SQAIPIALQGKDVCASATTGSGKTASFVLPILERLIHRDKRIMATR 266
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C HS+ E +F
Sbjct: 267 VVILTPTRELAIQ---------C---------HSVIEKLAKF------------------ 290
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
++ L VG +++++ E A + P DI+VATPGR++
Sbjct: 291 ---TDITACLVVG--GLSNKVQE--------AALRRHP-----------DIVVATPGRII 326
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FTLE + LV+DE DRLL + L +++ F P
Sbjct: 327 DHLRNAQSFTLETVDILVLDEADRLLSLGFADELEQIIK---------------FCP--- 368
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
P ++ SAT+T++ ++LA L L+ P+ +
Sbjct: 369 --------------------PNRQTLLFSATMTEEVDRLASLSLNRPVRVRLDPNMRVAS 408
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I E++ + L+AL +++ ++F + + HRL + FG +K
Sbjct: 409 GIQQEFIKIKEAREFDRDAMLLALCTRSFKKRVLIFFRAKKEAHRLKVI---FGLAGLKA 465
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ FR+G L+++D RG+D+ G+ ++NY+ +++YIHR
Sbjct: 466 AELHGNLSQNQRLEALEKFRDGNFDYLLATDLAARGLDILGIETIINYNMARTVESYIHR 525
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS--GD 474
GRTAR G G+ T + + + K FK+++ K+ N IP +I+ R S GD
Sbjct: 526 VGRTARWGHSGKSVTFISEQDRKVFKEIM-KSTNQKVSNRVIPPKIIDQWREKIDSMKGD 584
Query: 475 V 475
+
Sbjct: 585 I 585
>gi|388580865|gb|EIM21177.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 581
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 191/438 (43%), Gaps = 109/438 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCL 57
MG S + VQ +TI P + RD+ + TGSGKTL++ +P ++ LS +
Sbjct: 74 MGFSQMTEVQA----KTIPPLMAGRDVLGAAHTGSGKTLAFLIPAIEMLSRLHFKPRNGT 129
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
A+V+ PTR+LALQ IFG+ KD+
Sbjct: 130 GAIVISPTRELALQ------------IFGV-----------------------AKDIMKN 154
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
G+ +G A K EA +LQ V++++ATPGRL
Sbjct: 155 HNQTFGIIMGGA---------------NRKAEA----------DKLQKGVNLIIATPGRL 189
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ T+GF ++ L++DE DR+L ++ + ++++ ++N
Sbjct: 190 LDHLQNTKGFVFSNMKSLIIDEADRILEIGFEEEMRQIVKILPTENRQ------------ 237
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETRYK 296
M+ SAT T LA++ L PL++ E R
Sbjct: 238 -------------------------TMLFSATQTTKVTDLARVSLRQGPLYINVHEERSA 272
Query: 297 LP-ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
E+LE ++CES ++ L L L+ ++K IVF SS S LLN+ + I
Sbjct: 273 ATNEQLEQGYVVCESDMRFLLLFTFLKKNLKKKVIVFFSSCNSVKYHGELLNY---IDIP 329
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
+ + G Q+Q R+ T F +L+ +D RG+D+ V+ ++ +D P + YIH
Sbjct: 330 VLDLHGKQKQQKRTNTFFEFCNAPNGILLCTDVAARGLDIPAVDWIIQFDPPDDPRDYIH 389
Query: 416 RAGRTARAGQLGRCFTLL 433
R GRTARAG+ G+ L
Sbjct: 390 RVGRTARAGKAGKSLLFL 407
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 186/421 (44%), Gaps = 103/421 (24%)
Query: 24 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIG---------- 109
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+ F A+ ++G+ + + VG + L
Sbjct: 110 -----------------------------EQFEALGASIGILIAVIVGGIDTVTQSLALA 140
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
KRP ++VATPGRL+DH+ T+GF L L YLV+DE DR+
Sbjct: 141 KRP---------------------HVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L ++ L +L++ + T+L
Sbjct: 180 LNMDFEVELEKILKVIPKERR-------TYL----------------------------- 203
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 323
SAT+T+ KL + L P+ + ++Y+ ++L+ Y + K K YL+ +L
Sbjct: 204 --YSATMTKKVAKLERASLVDPVRIEVS-SKYQTVDKLKQYYIFIPYKYKEAYLIYILNE 260
Query: 324 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 383
+ + IVF S+ S + +L G + + G Q+ R +L F+ VL
Sbjct: 261 MAGQTAIVFCSTCASALKTALMLRKLGFGAVPL---HGQMSQAKRLGSLNKFKSKASTVL 317
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
V +D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T + + +V+ ++K
Sbjct: 318 VCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTARAGRSGVAVTFVTQYDVEIYQK 377
Query: 444 L 444
+
Sbjct: 378 I 378
>gi|448091961|ref|XP_004197457.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|448096550|ref|XP_004198488.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359378879|emb|CCE85138.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359379910|emb|CCE84107.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
Length = 719
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 188/434 (43%), Gaps = 117/434 (26%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLA 69
A+ I L +D+ + TGSGKT +Y +PI++ L + + +R +V+ PTR+LA
Sbjct: 231 AIQSSAIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPSKISAIRVIVLTPTRELA 290
Query: 70 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 129
+QV H + + +F L+ GLA
Sbjct: 291 IQV------------------HDVGKKIGRF--------------------VNNLNFGLA 312
Query: 130 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 189
VG ++ + +L RP DI++ATPGRL+DHI + F++
Sbjct: 313 VGGLNLRQQEQQLKSRP---------------------DIVIATPGRLIDHIRNSPSFSI 351
Query: 190 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 249
+ L +V+DE DR+L E +QA L +L L
Sbjct: 352 DTLEIMVIDEADRMLDEGFQAELTEILSLV------------------------------ 381
Query: 250 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 309
P + ++ SAT+ L QL L P+ + P + + KL+ E
Sbjct: 382 -------PKQKRQTLLFSATMNTKIQDLIQLSLDRPVRIMID------PPKATTAKLVQE 428
Query: 310 -------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
LKP L LL ++ +++ +VF S+ + HRL LL L +K+ E
Sbjct: 429 FVRIRKRDHLKPALLFELLNTIDSSNQDRIVVFVSTKGTAHRLRVLLGV---LGLKVSEL 485
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R K + F+E K+ VL+ +D RG+D+ + V+NYD P + Y+HR GR
Sbjct: 486 HGALTQEQRLKNVTDFKELKVSVLICTDLAARGLDIPKIEFVINYDMPKTHEIYLHRVGR 545
Query: 420 TARAGQLGRCFTLL 433
TARAG+ GR TL+
Sbjct: 546 TARAGREGRSITLV 559
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 109/437 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL--R 58
+G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R R
Sbjct: 188 LGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATR 243
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q+ HS+ + QF
Sbjct: 244 VLILTPTRELAVQI------------------HSMIQKLAQF------------------ 267
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ GL VG G+ ++V+ L+S DI+VATPGR++
Sbjct: 268 ---TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATPGRMI 303
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 304 DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL-------------------- 343
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ +L +L L+ PL L+ + + P
Sbjct: 344 --------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPP 385
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
E I ++ + L++L + K I+F+ + ++ HRL L FG +K
Sbjct: 386 GLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLAGLKA 442
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +Y+HR
Sbjct: 443 AELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHR 502
Query: 417 AGRTARAGQLGRCFTLL 433
GRTARAG+ G T +
Sbjct: 503 VGRTARAGREGYAVTFV 519
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 109/437 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL--R 58
+G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R R
Sbjct: 185 LGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATR 240
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q+ HS+ + QF
Sbjct: 241 VLILTPTRELAVQI------------------HSMIQNLAQF------------------ 264
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ GL VG G+ ++V+ L+S DI+VATPGR++
Sbjct: 265 ---TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATPGRMI 300
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 301 DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL-------------------- 340
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ +L +L L+ PL L+ + + P
Sbjct: 341 --------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPP 382
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
E I ++ + L++L + K I+F+ + ++ HRL L FG +K
Sbjct: 383 GLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLAGLKA 439
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +Y+HR
Sbjct: 440 AELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHR 499
Query: 417 AGRTARAGQLGRCFTLL 433
GRTARAG+ G T +
Sbjct: 500 VGRTARAGREGYAVTFV 516
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 204/464 (43%), Gaps = 109/464 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + + I P L +D+ + TGSGKT ++A+PI+ L + + A ++ PTR
Sbjct: 86 FTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRLWHDQ-QPYYACILAPTR 144
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+K+ F ++ +G+
Sbjct: 145 ELA---------------------------------------QQIKETFDSLGSLMGVRT 165
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG ++ D+ +L+++P I++ATPGRLMDH+ T+G
Sbjct: 166 TCIVGGMNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKG 204
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L L +LV+DE DRLL D E FG +
Sbjct: 205 FALRKLQFLVMDEADRLL-----------------DME-------------FGPV----- 229
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
++R K+ P + SAT+T +KL + L +P+ +Y+ + L +
Sbjct: 230 --LDRILKNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLI 286
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ LK +L+ LL + IVFT + + R+ L N L G Q+
Sbjct: 287 VVPGGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLCNL---LEFSATALHGDLNQN 343
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R+ L F+ GK +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+
Sbjct: 344 QRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGRTARAGRS 403
Query: 427 GRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
G+ +L+ + +++ R +++L K P ++ S++ SLR
Sbjct: 404 GKSVSLVSQYDLELILRIEEVLGK----KLPKENVDKSIVLSLR 443
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +D+ + TGSGKT +++LPI+QTL + ALV+ PTR+LA Q+
Sbjct: 64 IQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLWENP-QPFFALVLAPTRELAYQI 122
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ QV ++ +G+ + VG
Sbjct: 123 SQ-----------------------------------QV----TSLGSGIGVRTAVLVGG 143
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP I+VATPGRLMDH+ T+GF+L+ L
Sbjct: 144 MDMMSQSIALSKRPH---------------------IIVATPGRLMDHLENTKGFSLKSL 182
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + + +L++ + +T+L
Sbjct: 183 KYLVMDEADRLLDLDFGPIIDKILKVIPKER-------NTYL------------------ 217
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L+ P+ + ++Y L + L+ K
Sbjct: 218 -------------FSATMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKN 263
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ L L ++FT +V + RL +L G I + G QS+R +L
Sbjct: 264 KDAYLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLH---GQMTQSLRLASL 320
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G+ TL
Sbjct: 321 NKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITL 380
Query: 433 LHKDEVKRFKKL 444
+ + +V+ +++
Sbjct: 381 VTQYDVEILQRI 392
>gi|357116154|ref|XP_003559848.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 449
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 183/436 (41%), Gaps = 110/436 (25%)
Query: 14 WQE-------TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
W+E I L RDL TGSGKT ++ALPI+Q L R A V+ PTR
Sbjct: 38 WKEPTKIQAGAIPHALQGRDLIGLGQTGSGKTGAFALPIIQALLEHR-RPFFACVMSPTR 96
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA+Q IAE F A+ A+GL
Sbjct: 97 ELAIQ---------------------IAEQ------------------FEALGSAIGLVC 117
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG ++ + KRP I+V TPGRL+DH+ T+G
Sbjct: 118 SVLVGGVDRMQQVLSIAKRPH---------------------IVVGTPGRLLDHLKDTKG 156
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L + YLV+DE D+LL ++ L +L+ + T+L
Sbjct: 157 FSLNKVKYLVLDEADKLLNLEFKESLDDILKAIPKERR-------TYL------------ 197
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T+ +KL + L +P + ++Y + L+
Sbjct: 198 -------------------FSATMTKKVSKLQRACLRNPAKVEV-SSKYSTVDTLKQEWY 237
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K YLV L L ++F + EST L L + G K SG Q
Sbjct: 238 FVPAAYKDCYLVHALNELPGSMIMIFVRTCESTRLLALTLRNLG---FKALSISGQMSQD 294
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ +L+ +D +RG+D++GV+ V+NYD P K YIHR GRTARAG+
Sbjct: 295 KRLGALNKFKAKDFNILICTDVASRGLDIQGVDAVINYDIPMNSKDYIHRVGRTARAGKS 354
Query: 427 GRCFTLLHKDEVKRFK 442
G +L+++ E + FK
Sbjct: 355 GYAVSLVNQYETEWFK 370
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 190/435 (43%), Gaps = 105/435 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 63 IQKEAIPVALQGKDIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELAFQI 121
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ ++G+ + VG
Sbjct: 122 SEQ---------------------------------------FEALGASIGVKCAVIVGG 142
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I++ATPGRL+DH+ T+GF L+ L
Sbjct: 143 MDMVAQALILSKKPH---------------------IIIATPGRLVDHLENTKGFNLKAL 181
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DR+L ++ + +L++
Sbjct: 182 KYLVMDEADRILNMDFEVEVDKILRVI--------------------------------- 208
Query: 253 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PR + L SAT+T+ KL + L P+ + T+Y+ E+L+ Y + K
Sbjct: 209 ------PRERRTYLFSATMTKKVQKLQRASLQDPVKVEVS-TKYQTVEKLQQYYIFIPVK 261
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K +YLV +L L IVF S+ R+ LL G + + G Q R
Sbjct: 262 FKDVYLVHILNELAGNSFIVFVSTCAGALRVALLLRALGVGAVPL---HGQMSQQKRLAA 318
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ VL+ +D +RG+D+ V+ VVN D P + K YIHR GRTARAG+ G+ T
Sbjct: 319 LNKFKSKARSVLICTDVASRGLDIPHVDVVVNLDIPLHSKDYIHRVGRTARAGRAGKAIT 378
Query: 432 LLHKDEVKRFKKLLQ 446
+ + +V+ ++++ Q
Sbjct: 379 FVSQYDVELYQRIEQ 393
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 109/437 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL--R 58
+G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R R
Sbjct: 123 LGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATR 178
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q+ HS+ + QF
Sbjct: 179 VLILTPTRELAVQI------------------HSMIQNLAQF------------------ 202
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ GL VG G+ ++V+ L+S DI+VATPGR++
Sbjct: 203 ---TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATPGRMI 238
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 239 DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL-------------------- 278
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ +L +L L+ PL L+ + + P
Sbjct: 279 --------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPP 320
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
E I ++ + L++L + K I+F+ + ++ HRL L FG +K
Sbjct: 321 GLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLAGLKA 377
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +Y+HR
Sbjct: 378 AELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHR 437
Query: 417 AGRTARAGQLGRCFTLL 433
GRTARAG+ G T +
Sbjct: 438 VGRTARAGREGYAVTFV 454
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 186/438 (42%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + + I L RD+ + TGSGKT ++++PI+Q L + R L A ++ PTR
Sbjct: 45 FSAPTDIQAQAIPHALQGRDVIGLAQTGSGKTAAFSIPILQGLWDDP-RPLFACILAPTR 103
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+L+ Q++ Q++ A+ +G+
Sbjct: 104 ELSYQISQ-----------------------------------QIE----ALGATIGVRC 124
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG + + L KRP ++VATPGRL DH+ T+G
Sbjct: 125 ATIVGGMDMMTQSIALSKRPH---------------------VIVATPGRLQDHLENTKG 163
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YLV+DE DRLL + + +LQ ++ RR
Sbjct: 164 FSLRSLRYLVMDEADRLLDLDFGPIIDKLLQ----------------------NIPKERR 201
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
M+ SAT+T KL + L +P+ + G T+Y L+ Y L
Sbjct: 202 T----------------MLFSATMTTKVAKLQRASLRNPVRIEIG-TKYSTVSTLQQYYL 244
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K YLV L IVFT +V RL LL G I + G Q+
Sbjct: 245 FMPFAHKDTYLVHLANEQVGHSIIVFTRTVHDAQRLAVLLRLLGFSAIPLH---GQLSQT 301
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ G ++V +D RG+D+ V+ VVN+D P + K YIHR GRTARAG+
Sbjct: 302 ARLGALNKFKAGGRSIMVCTDVAARGLDIPAVDLVVNFDIPTHSKDYIHRVGRTARAGRQ 361
Query: 427 GRCFTLLHKDEVKRFKKL 444
GR TL+ + +V+ +++
Sbjct: 362 GRSVTLVTQYDVELLQRI 379
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 191/429 (44%), Gaps = 105/429 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ +PTGSGKTL++ +PI+ L + + A V+ PTR+LA Q+++
Sbjct: 42 RDIIGIAPTGSGKTLAFVIPILHRLWDNP-QGYFACVLSPTRELAYQISAQ--------- 91
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
F A+ A+G+ + VG D + + ++
Sbjct: 92 ------------------------------FEALGAAMGVQSVVIVGGDD--DRVQQAVR 119
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
L I+VATPGRL DH+ +T+GF+L L +LV+DE DRLL
Sbjct: 120 ------------------LAQKPHIIVATPGRLHDHLKSTKGFSLRSLKHLVLDEADRLL 161
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+Q + ++Q +P RC
Sbjct: 162 DLDFQREITEIMQ---------------SIPK--------ERC---------------TY 183
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
+ SAT+T + +KL + L P+ + RY L + L+C K + LV L+ SL
Sbjct: 184 LFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLVQHYLLCPLVEKEVTLVYLINSL 243
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ IVF +V RL +L G + + G QS R F+ GK ++LV
Sbjct: 244 VQNLIIVFVRTVADAKRLSIILRSLGFDAVPLH---GELTQSQRLGAFTRFKSGKSKILV 300
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RF 441
++D +RG+DV V+ V+NYD P + K YIHR GRTARAG+ G+ ++ + + + R
Sbjct: 301 ATDVASRGLDVPNVDVVINYDTPTHSKDYIHRVGRTARAGRAGKSILMVTQYDAELMLRL 360
Query: 442 KKLL-QKAD 449
+K+L QK D
Sbjct: 361 EKVLNQKLD 369
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 209/474 (44%), Gaps = 119/474 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R A
Sbjct: 205 LGFTTPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAA 260
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL V++PTR+L +Q C + +A H+
Sbjct: 261 TRCL---VLVPTRELGVQ---------CFEVGTKLAAHT--------------------- 287
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ L VG SI + + L RP D+++AT
Sbjct: 288 ---------DIRFALVVGGLSIKAQEANLRTRP---------------------DVVIAT 317
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DHI + FTL+ L LV+DE DR+L E+ F+D T
Sbjct: 318 PGRLIDHIRNSPTFTLDALDILVLDEADRML-------------------EDGFADELTE 358
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
+ I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 359 I---------IKSC---------PTSRQT-MLFSATMTDSVDELVRMSLNKPVRLFVDPK 399
Query: 294 RYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
R L+ + + K + LVAL + + + I+F S + H++ + F
Sbjct: 400 RATARGLLQEFVRVRAGKEAERSALLVALCKRTFKSRVIIFFRSKKLAHQMRIV---FRL 456
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
L +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD P +
Sbjct: 457 LDMKCDELHGDLSQEQRLKALQQFRDGHVDYLMATDLASRGLDIKGIETVINYDMPGQLA 516
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN--DSCPIHSIPSSLI 463
Y+HR GRTARAG+ GR TL+ + + K K ++ + D +P ++
Sbjct: 517 QYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHSSGGEDQIRHRQVPQEVV 570
>gi|170083961|ref|XP_001873204.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650756|gb|EDR14996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 355
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 199/450 (44%), Gaps = 120/450 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G + P+Q A I L +D+ N+ TGSGKT ++ +P+V+ L R A
Sbjct: 14 LGFNKPTPIQAA----AIPVALLGKDVVGNAMTGSGKTAAFIIPMVERLLYREKGKKAAA 69
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL V++PTR+LA+Q C ++ ++ H+ ++C
Sbjct: 70 TRCL---VLVPTRELAVQ---------CFDVGVKLSTHTDIQLC---------------- 101
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
L VG S+ + L RP DI++AT
Sbjct: 102 --------------LLVGGLSLKSQEVALRARP---------------------DIVIAT 126
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DHI + FTL+ + LV+DE DR+L + + L +
Sbjct: 127 PGRLIDHIRNSPAFTLDAIDILVLDEADRMLSDGFADELAEI------------------ 168
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
I+ C V R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 169 ----------IKSCPVSRQ----------TMLFSATMTDSVDELVKMSLNKPVRLFVDPR 208
Query: 294 RYKLPERLESYKLICESK--LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
+ ++ + + K + LVAL + + + I+F S + H++ + + G
Sbjct: 209 KATARGLVQEFVRVRAGKDSERSALLVALCKRTFKNRVIIFLRSKKLAHQMRIVFSLLG- 267
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+K +E G Q R K L+ FR+G++ L+++D +RG+D++GV ++NYD P +
Sbjct: 268 --LKCEELHGDLSQEQRLKALQLFRDGQVDFLMATDLASRGLDIKGVETIINYDMPGQLS 325
Query: 412 TYIHRAGRTARAGQLGRCFTL---LHKDEV 438
Y+HR GRTARAG+ GR L + DEV
Sbjct: 326 QYLHRVGRTARAGKQGRVHILVAFMSSDEV 355
>gi|295664398|ref|XP_002792751.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278865|gb|EEH34431.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 835
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 203/436 (46%), Gaps = 106/436 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 327 GLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 386
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 387 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 418
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 419 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 446
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 447 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 491
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 492 QT-----------------------MLFSATMTNTIDKLIRVGLNRPVRLMVNAQKQTVG 528
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YLV L +++ +++ I+F + + HR+ + FG +K
Sbjct: 529 TLVQEFVRLRPGREDKRLGYLVTLCKTVYKDRVIIFFRAKKEAHRVRIIFGLFG---LKA 585
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 586 AELHGSMSQEQRIKSVESFRDGKVSFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 645
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 646 VGRTARAGRSGRACTI 661
>gi|401885525|gb|EJT49639.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
gi|406694842|gb|EKC98161.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 804
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 203/471 (43%), Gaps = 109/471 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-----AVR 55
+G ++ P+Q + L RD+ ++ TGSGKT ++ +PI++ L R
Sbjct: 226 LGFNAPTPIQ----SRAVPLALLGRDILGSAVTGSGKTAAFMIPILERLQYRDRGKGGAA 281
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
C R LV+ PTR+LA+Q C Q V
Sbjct: 282 C-RVLVLCPTRELAVQ-------------------------CEQ--------------VG 301
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
A+A GL V A+ L G+ + + L++ DIL+ATPG
Sbjct: 302 KALAERGGLDVRFAL-----------------LVGGLSLNAQ--AHALRTLPDILIATPG 342
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 343 RLIDHLTNTPSFTLGALDILVIDEADRMLEAGFTDELEEI-------------------- 382
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
+R+C P R M+ SAT+T ++L +L L P+ + + R
Sbjct: 383 --------VRQC---------PRGRQT-MLFSATMTDSVDELVKLSLDRPVRVFVDKERN 424
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
+ + + + + L+ L + EK I+F S H++ + FG +
Sbjct: 425 TAAGLTQEFVRVRSEETRSPALLTLCKRTVHEKAIIFFRSKALAHQMRVV---FGLCGLV 481
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R L F+ G++ L+++D +RG+D++GV V+NYD P + Y+H
Sbjct: 482 AAELHGNLTQEQRLVALNDFKAGRVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYVH 541
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
R GRTARAG+ GR +L+ + + K K +++++D D IP ++++
Sbjct: 542 RVGRTARAGRKGRSISLVGEPDRKMLKAVMKRSDKDQIRHRIIPPEAVQAM 592
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 198/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 107 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 162
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 163 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 186
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 187 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 225
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 252
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 253 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 307
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R +L
Sbjct: 308 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGSL 364
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 425 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 198/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 149 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 204
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 205 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 228
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 229 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 267
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 268 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 294
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 295 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 349
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R +L
Sbjct: 350 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGSL 406
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 407 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 466
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 467 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 500
>gi|121700981|ref|XP_001268755.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
gi|142982514|sp|A1CNV8.1|DRS1_ASPCL RecName: Full=ATP-dependent RNA helicase drs1
gi|119396898|gb|EAW07329.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
Length = 826
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 199/437 (45%), Gaps = 108/437 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 320 GLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 379
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ +A H+ C
Sbjct: 380 VAILMPTRELAVQ---------CYNVATKLATHTDVTFC--------------------- 409
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 410 ---------QLVGGFSLREQENILKKRP---------------------DVIIATPGRFI 439
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P
Sbjct: 440 DHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPK-- 482
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 295
S +T M+ SAT+T +KL ++ L+ P+ L + T
Sbjct: 483 -SRQT--------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSM 521
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E K + YL+ L + + IVF + HR+ + FG L +K
Sbjct: 522 NLTQEFVRLRPGREGK-RLGYLLYLCSEIFTGRVIVFFRQKKEAHRVRIV---FGLLGLK 577
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R K++++FREGK+ L+++D +RG+D++GV V+NY+ P + Y+H
Sbjct: 578 AAELHGSMSQEQRIKSVESFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLH 637
Query: 416 RAGRTARAGQLGRCFTL 432
R GRTARAG+ GR T+
Sbjct: 638 RVGRTARAGRSGRACTI 654
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 109/437 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL--R 58
+G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R R
Sbjct: 185 LGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATR 240
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA+Q+ HS+ + QF
Sbjct: 241 VLILTPTRELAVQI------------------HSMIQNLAQF------------------ 264
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ GL VG G+ ++V+ L+S DI+VATPGR++
Sbjct: 265 ---TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATPGRMI 300
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 301 DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL-------------------- 340
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C R M+ SAT+T++ +L +L L+ PL L+ + + P
Sbjct: 341 --------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPP 382
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
E I ++ + L++L + K I+F+ + ++ HRL L FG +K
Sbjct: 383 GLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLAGLKA 439
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +Y+HR
Sbjct: 440 AELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHR 499
Query: 417 AGRTARAGQLGRCFTLL 433
GRTARAG+ G T +
Sbjct: 500 VGRTARAGREGYAVTFV 516
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 195/445 (43%), Gaps = 107/445 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E++ L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+
Sbjct: 45 IQSESLPHALEGRDIIGVAETGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAYQI 103
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ A+G + VG
Sbjct: 104 SQQ---------------------------------------FEALGAAMGARCAVIVGG 124
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L KRP ++VATPGRL+ H+ T+GF+L L
Sbjct: 125 MDLPTQAIALAKRPH---------------------VVVATPGRLLQHLEETKGFSLRTL 163
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + + +L+L + +T+L
Sbjct: 164 KFLVLDEADRLLDMDFGPAIDKILKLIPKER-------TTYL------------------ 198
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + +Y+ L + L+ K
Sbjct: 199 -------------FSATMTSKVAKLQRASLVNPVRVEVS-GKYQTVSTLLQHYLLVPLKD 244
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K + L+ L SL + I+FT +V L +L G + + G QS R L
Sbjct: 245 KVVMLIYLANSLAQNSIIIFTRTVRDARLLSIILRTLGFPAVPLH---GQLSQSQRLGAL 301
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G ++LV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 302 GKFKSGGRKILVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRAGKAITL 361
Query: 433 LHKDEV---KRFKKLLQKADNDSCP 454
+ + +V +R +K++ K D+ P
Sbjct: 362 VTQYDVELLQRIEKVIGK-KMDAWP 385
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 189/432 (43%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++ I L +D+ + TGSGKT ++++P++Q L + L LV+ PTR+LA+Q+
Sbjct: 39 IQRKAIPEALAGKDIVGLAQTGSGKTAAFSIPMLQALLAKP-SGLFGLVLAPTRELAVQI 97
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ D A+ +G+ + VG
Sbjct: 98 S---------------------------------------DQIEALGAVIGVKCAVLVGG 118
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ L K+P I+V TPGR++ H+ T+GF L+ L
Sbjct: 119 IDTMSQSMALAKKPH---------------------IIVGTPGRVVYHLENTKGFNLKTL 157
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
Y V+DE DRLL ++ + T+L++ D +TFL
Sbjct: 158 KYFVMDEADRLLGMDFEEEINTILKVIPKDR-------NTFL------------------ 192
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L+ P+ + T+Y + L+ + K
Sbjct: 193 -------------FSATMTSKVAKLQRASLNDPVKIQVA-TKYSTVDTLQQEYIFIPYKH 238
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL +L L I+FTS+ ++ +L +L + L K +G QS R +L
Sbjct: 239 KECYLTYILNELAGNSVIIFTSTCAASTKLAIMLRN---LSFKAIPINGQMDQSKRLSSL 295
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ + +LV++D RG+D+ V+ V+NYD P K Y+HR GRTARAG+ GR TL
Sbjct: 296 NKFKAQTMDILVATDVAARGLDIPSVDLVINYDVPVSSKEYMHRVGRTARAGRTGRAVTL 355
Query: 433 LHKDEVKRFKKL 444
+ + +V+ + ++
Sbjct: 356 VTQYDVEIYLRI 367
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 107 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 162
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 163 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 186
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 187 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 225
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 252
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 253 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 307
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 308 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 364
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 425 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 107 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 162
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 163 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 186
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 187 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 225
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 252
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 253 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 307
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 308 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 364
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 425 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 107 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 162
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 163 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 186
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 187 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 225
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 252
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 253 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 307
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 308 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 364
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 425 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 188/432 (43%), Gaps = 102/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEKSIPVALEGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
A F A+ + L + VG
Sbjct: 145 GQA---------------------------------------FEALGSLISLRCAVIVGG 165
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL+DH+ T+GF+L L
Sbjct: 166 LDMVPQAIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLRTL 204
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YL++DE DRLL + + +L+ F+P RR
Sbjct: 205 KYLIMDEADRLLDMDFGPSIDKILK---------------FIPRE-------RRT----- 237
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L P+ ++ +Y+ L + +
Sbjct: 238 -----------YLFSATISSKIESLQRASLRDPVRVSISSNKYQTVSTLLQHYIFIPHVR 286
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YL+ L+ + I+FT +V T R+ LL G I + G Q+ R L
Sbjct: 287 KDVYLIYLINEHVGKSTIIFTRTVWETQRISILLRTLGFGAIPL---HGQLSQTSRLGAL 343
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+ G ++
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISV 403
Query: 433 LHKDEVKRFKKL 444
+ + +V+ F ++
Sbjct: 404 VTQYDVEIFTRI 415
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 149 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 204
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 205 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 228
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 229 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 267
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 268 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 294
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 295 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 349
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 350 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 406
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 407 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 466
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 467 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 500
>gi|291409987|ref|XP_002721272.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Oryctolagus
cuniculus]
Length = 789
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 212/473 (44%), Gaps = 114/473 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 230 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 285
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+L +QV HS+ + QF S+
Sbjct: 286 VLVLVPTRELGIQV------------------HSVTKQLAQFCSI--------------- 312
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 313 ------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 345
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 346 DHLHNCPSFHLNSIEVLILDEADRMLDEYFEEQMKEI----------------------- 382
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 383 -----IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 427
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + I ++ + + ALL + ++FT + + HRL LL L +++
Sbjct: 428 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRLHILLGL---LGLQV 484
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R + L+ F++ +I VLV++D RG+D+EGV VVN+ P IK Y+HR
Sbjct: 485 GELHGNLSQTQRLEALRRFKDEQIDVLVATDVAARGLDIEGVKTVVNFTMPNTIKHYVHR 544
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 545 VGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILRFR 594
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 107 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 162
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 163 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 186
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 187 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 225
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 252
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 253 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 307
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 308 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 364
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 425 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 149 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 204
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 205 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 228
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 229 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 267
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 268 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 294
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 295 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 349
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 350 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 406
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 407 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 466
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 467 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 500
>gi|170044624|ref|XP_001849941.1| ATP-dependent RNA helicase DRS1 [Culex quinquefasciatus]
gi|167867695|gb|EDS31078.1| ATP-dependent RNA helicase DRS1 [Culex quinquefasciatus]
Length = 807
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 212/468 (45%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L + A R LV++P
Sbjct: 211 PIQAA----TIPIALMGRDVCGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVP 266
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L QV + + + Q+ S+
Sbjct: 267 TRELGAQV------------------YQVTKQLTQYTSI--------------------- 287
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VG+A+G G+ ++ + L++ DI++ATPGRL+DHI T
Sbjct: 288 EVGIAIG-------------------GLDVKAQEAV--LRTNPDIVIATPGRLIDHIKNT 326
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + ++Q
Sbjct: 327 PSFSLDSIEVLILDEADRMLDEYFAEQMKEIIQ--------------------------- 359
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGET-RYKLPERL 301
C R M+ SAT+T LA + L P+ F+ +T + L +
Sbjct: 360 -SCSKSRQT----------MLFSATMTDQVKDLAAVSLSKPVKVFVNNNQTVAFNLRQEF 408
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ ++ +P+ L AL+ + C+VF + ++ HRL LL L +K E G
Sbjct: 409 IRIRESRDADREPI-LAALICRTFHDHCMVFVQTKKTAHRLRILLGL---LGVKAGELHG 464
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
QS R ++LK F++ +I VLV++D RG+D+ GV V+N+ PA ++ YIHR GRTA
Sbjct: 465 DLTQSQRLESLKQFKDEQIDVLVATDVAARGLDISGVKTVINFVMPATMEHYIHRVGRTA 524
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
RAG+ G +L + E K K +++ A N P+ + IP+ ++E R
Sbjct: 525 RAGKAGVSVSLAGELERKIVKDIIKNAVN---PVKNRIIPNEIVEKYR 569
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + E+I L +D+ + TGSGKT ++ALP++Q+L + + A V+ PTR
Sbjct: 79 FKTPTPIQTESIPYALQNKDIIGLAQTGSGKTAAFALPVLQSLWD-SPSAFFACVLAPTR 137
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ QFD A+ +G+
Sbjct: 138 ELAYQISQ------------------------QFD---------------ALGSTIGVKT 158
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L KRP ++VATPGRL DH+ T+G
Sbjct: 159 VVIVGGMDMMSQAIALSKRPH---------------------VIVATPGRLHDHLEHTKG 197
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L +L +L++DE DRLL + + +L++ + + T+L
Sbjct: 198 FSLRNLQFLIMDEADRLLDMDFGPVIDKILKVIPKERK-------TYL------------ 238
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T KL + L++P+ + +Y L L
Sbjct: 239 -------------------FSATMTTKVAKLQRASLNNPVKVEVS-AKYDTVSALVQTYL 278
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K YLV L L + IVFT +V RL +L G + + G QS
Sbjct: 279 FLPFKHKDTYLVYLANELSGKSLIVFTRTVHDASRLSLILRTLGFPAVPLH---GQLSQS 335
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ G +LV++D +RG+D+ V+ V+N+D P K YIHR GRTARAG+
Sbjct: 336 ARLGALNKFKSGDQSLLVATDVASRGLDIPAVDCVINFDLPTNSKDYIHRVGRTARAGRS 395
Query: 427 GRCFTLLHKDEVKRFKKL 444
G+ TL+ + +V+ +++
Sbjct: 396 GKSITLVTQYDVELLQRI 413
>gi|444726438|gb|ELW66972.1| ATP-dependent RNA helicase DDX51 [Tupaia chinensis]
Length = 478
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 171/366 (46%), Gaps = 40/366 (10%)
Query: 106 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 165
I + QV VF A L V L GQ +A E L+++ P+ +
Sbjct: 134 IPVVQVSKVFNVYTDATPLRVALLTGQKPLAKEQESLVQK---------TPDG----YRC 180
Query: 166 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 225
DI+VATPGRL+DHI+ T F+L+ L +L+ +LL A P LQ
Sbjct: 181 LADIVVATPGRLVDHIDQTPAFSLQQLRFLM--PLQKLLFSATLTQNPEKLQQLGLYQPR 238
Query: 226 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 285
F +T LP G G P L+ L +D +++
Sbjct: 239 LF---TTGLPQRSPGDAGADVDGSSGGKYAFPAGLSPLGALALVLRKDFSRII------- 288
Query: 286 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
F + E + L KPL + L+ + + FT+S E++HRL L
Sbjct: 289 CFTNSRENSHSLSS-------------KPLVALHLVLRKDFSRILCFTNSRENSHRLFLL 335
Query: 346 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 405
+ FG + E+S R + LK F +GKIQ+L+S+DA RG+DV GV V+NYD
Sbjct: 336 VRAFGG--VNAAEFSSRLGPGCRKRLLKQFEQGKIQLLISTDATARGIDVPGVELVLNYD 393
Query: 406 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 465
P Y + Y+HR GRTARAGQ G+ FTLL + + +RF ++L +A + H IP +++
Sbjct: 394 APQYPRAYVHRVGRTARAGQTGQAFTLLLRVQERRFLQMLAEAGVPTLERHEIPGDVLQP 453
Query: 466 LRPVYK 471
L P Y+
Sbjct: 454 LVPRYE 459
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 10/56 (17%)
Query: 2 GISSLFPVQVAVWQ---ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQ 47
GISS FPVQ AV E+ G DLC+++PTGSGKTL++ +P+VQ
Sbjct: 83 GISSYFPVQAAVIPVVLESAANGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQ 138
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 202/458 (44%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 106 IQSKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 161
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 162 ------------------------------------QQIKEAFDSLGSLMGVRSTCIVGG 185
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 186 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 224
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++ + + +T+L
Sbjct: 225 KFLVMDEADRLLDMEFGPVLDRILKIIPT------QERTTYL------------------ 260
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 261 -------------FSATMTSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLMVVPGGL 306
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV LL + I+FT + + RL L N L G Q+ R L
Sbjct: 307 KNTYLVYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 363
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 364 DLFKAGKRAILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 423
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P ++ ++I +LR
Sbjct: 424 VSQYDLELILRIEEVLGK----KLPKENVDKNIILTLR 457
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 107 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 162
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 163 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 186
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 187 MNMMDQARDLMRKPH---------------------IVIATPGRLMDHLENTKGFSLRKL 225
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 226 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 252
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 253 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 307
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 308 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 364
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 365 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 424
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L K P S+ ++I +LR
Sbjct: 425 VSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|440632967|gb|ELR02886.1| hypothetical protein GMDG_01108 [Geomyces destructans 20631-21]
Length = 870
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 169/348 (48%), Gaps = 63/348 (18%)
Query: 2 GISSLFPVQVAVWQETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
GI S F VQ AV + GP D+ +++ TGSGKTL+Y LP+V+ +S V LR L
Sbjct: 298 GIPSAFAVQAAVLSLLLPGPQKQPGDVLVSAATGSGKTLAYVLPMVEDISQTMVTQLRGL 357
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGL-----------IADHSIAEMCVQFDSLLFISLP 109
+V+PTR+L Q C N +G I + ++ + F+ P
Sbjct: 358 IVMPTRELVTQAR--EVSDMCANAYGTGSRRHINVGVAIGNQTLRQEQSSLMKQDFVYDP 415
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
+ A + A SS+ DE++ L+ +E I P D + + VDI
Sbjct: 416 KEYR-------ARQERINAAWSGSSVGDEVANLL----MEEDIST-PIDHIVQYSPKVDI 463
Query: 170 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 229
++ TPGRL++H+ +T GFTLEHL +LV+DE D+LL +++Q WL TV+ +
Sbjct: 464 MICTPGRLVEHLKSTPGFTLEHLKWLVIDEADKLLDQSFQQWLETVMA--------SLTS 515
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF-- 287
T PS S KD R+ K+VLSAT+T+D L+QL L+ P F
Sbjct: 516 RETAAPSQLRS-------------KD----RITKVVLSATMTRDIGLLSQLKLNKPKFVV 558
Query: 288 ------LTTGETRY---KLPERL-ESYKLICESKLKPLYLVALLQSLG 325
+ GE + LP L ES I + LKPLYL+ +L+ G
Sbjct: 559 LEGNEGMGAGEGQVDTLNLPHTLHESAIKIDQEGLKPLYLLEVLKRNG 606
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
KP + L++ G ++FT S ES RL LL + + E + + R +TL
Sbjct: 688 KPAGNIKLVKPHG---VLIFTKSNESAVRLFRLLALL--VPSRASEIGAITSTTSRKRTL 742
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
++FR G + VL++SD + RG+D+ + +VVNYD P I +Y+HR GRTARAG+ G TL
Sbjct: 743 RSFRSGALSVLIASDLVARGLDLPNLAHVVNYDMPTSITSYVHRVGRTARAGKEGAATTL 802
Query: 433 LHKDEVKRF 441
E + F
Sbjct: 803 FSATEGRWF 811
>gi|331219074|ref|XP_003322214.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301204|gb|EFP77795.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 785
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 196/459 (42%), Gaps = 121/459 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC---L 57
M I+S P+Q ++ I GL +DL +S TGSGKTL Y +PIV+ L R +
Sbjct: 265 MSITSPTPIQ----RQAIPLGLLGKDLVCSSVTGSGKTLGYMVPIVERLIWRDKKGGGRT 320
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
R +++ PTR+LA+QV + ++ +F L F
Sbjct: 321 RVMILTPTRELAVQV------------------FQVGKLLARFTDLTF------------ 350
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
L VG + + +EL +RP +I++ TPGR+
Sbjct: 351 ---------SLCVGGMDLRTQEAELRERP---------------------EIVIGTPGRV 380
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DHI TRGF+LE L LV+DE DR+L E +Q L +
Sbjct: 381 IDHIRNTRGFSLETLEILVIDEADRILEEGFQDELEEI---------------------- 418
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG---ETR 294
I C P R M+ SAT+ + LA+L L P+ + T
Sbjct: 419 ------ISNC---------PRSRQT-MLFSATVNESVADLAKLSLDKPIRIKIDPPKSTA 462
Query: 295 YKLPERLESYKLICESK--------LKPLYLVALLQ--SLGEEKCIVFTSSVESTHRLCT 344
L + K +K + LV L + + + + I+F S HR+
Sbjct: 463 AGLTQEFLKVKDSASNKKAASLTDVTRQAILVTLCKASAFSKGRTIIFFRSKVGAHRMKI 522
Query: 345 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 404
+ + F +K +E G Q R L+ F++G+ L+++D +RG+D++GV V+NY
Sbjct: 523 IFSLFS---LKAEELHGNLNQQQRLAALQKFKDGETSFLLATDLASRGLDIKGVERVINY 579
Query: 405 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
+ P Y+HR GRTARAG G TL+ + + K K+
Sbjct: 580 EPPTQYDVYLHRIGRTARAGTKGSALTLVGESDRKLIKE 618
>gi|119494918|ref|XP_001264258.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
gi|142982588|sp|A1D1R8.1|DRS1_NEOFI RecName: Full=ATP-dependent RNA helicase drs1
gi|119412420|gb|EAW22361.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
Length = 819
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 108/437 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 313 GLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 372
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ +A H+ + F L
Sbjct: 373 VAILMPTRELAVQ---------CYNVATKLATHT---------DITFCQL---------- 404
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 405 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 432
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 433 DHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPQSR 477
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 295
+ M+ SAT+T +KL ++ L+ P+ L + T
Sbjct: 478 QT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSM 514
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E K + YL+ L + + IVF HR+ + FG L +K
Sbjct: 515 NLTQEFVRLRPGREDK-RLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIV---FGLLGLK 570
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R K+++ FREGK+ L+++D +RG+D++GV V+NY+ P + Y+H
Sbjct: 571 AAELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLH 630
Query: 416 RAGRTARAGQLGRCFTL 432
R GRTARAG+ GR T+
Sbjct: 631 RVGRTARAGRSGRACTI 647
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 181/421 (42%), Gaps = 102/421 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEQSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
A F A+ + L + VG
Sbjct: 145 GQA---------------------------------------FEALGSLISLRCAVIVGG 165
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL+DH+ T+GF+L L
Sbjct: 166 LDMVPQSIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLRTL 204
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YL++DE DRLL + + +L+ F+P RR
Sbjct: 205 KYLIMDEADRLLDMDFGPSIDKILK---------------FVPRE-------RRT----- 237
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L P+ ++ +Y+ L + L
Sbjct: 238 -----------YLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQHYLFIPHPQ 286
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++L+ L+ + IVFT +V T R+ LL G I + G QS R L
Sbjct: 287 KDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPL---HGQLSQSSRLGAL 343
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
FR G +LV++D RG+D+ V+ V+NYD P KTY+HR GRTARAG+ G +L
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYVHRVGRTARAGKSGVAISL 403
Query: 433 L 433
+
Sbjct: 404 V 404
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 11 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTRDLA 69
+ + E I L +D+ + TGSGKT ++ALPI+ L + A V+ PTR+LA
Sbjct: 33 LKIQTEAIPLALEGKDVIGLAQTGSGKTGAFALPILHALLEAPRPKDFFACVLSPTRELA 92
Query: 70 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 129
+Q IAE F A+ +G+ +
Sbjct: 93 IQ---------------------IAEQ------------------FEALGSEIGVKCAVL 113
Query: 130 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 189
VG + + ++ K+P I+V TPGR++DH+ T+GF+L
Sbjct: 114 VGGIDMVQQSIKIAKQP---------------------HIIVGTPGRVIDHLKHTKGFSL 152
Query: 190 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 249
L YLV+DE DRLL E ++ L +LQ+ + TFL
Sbjct: 153 SRLKYLVLDEADRLLNEDFEESLNEILQMIPRERR-------TFL--------------- 190
Query: 250 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 309
SAT+T+ KL ++ L +P+ + ++Y + L+
Sbjct: 191 ----------------FSATMTKKVQKLQRVCLRNPVKIEAS-SKYSTVDTLKQQYRFLP 233
Query: 310 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRS 369
+K K YLV +L + +VFT + ++T L +L + G I I +G QS R
Sbjct: 234 AKHKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPI---NGHMSQSKRL 290
Query: 370 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 429
L F+ G+ +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G
Sbjct: 291 GALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVA 350
Query: 430 FTLLHKDEVKRF 441
+L+++ E++ +
Sbjct: 351 ISLVNQYELEWY 362
>gi|443897915|dbj|GAC75254.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 909
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 211/516 (40%), Gaps = 156/516 (30%)
Query: 3 ISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL---- 57
+SSL F + TI L +D+ + TGSGKT ++ +P ++ L+ RA
Sbjct: 333 LSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPAIERLTWRAKGRAQEAK 392
Query: 58 -RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R L++ PTR+LA+Q C +S+ + +F + F
Sbjct: 393 SRVLILAPTRELAIQ---------C---------YSVGKSIAKFTDIRFC---------- 424
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + +EL RP ++++ATPGR
Sbjct: 425 -----------LCVGGLSVKSQEAELKLRP---------------------EVVIATPGR 452
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ + FTL+ + LV+DE DR+L + + L +
Sbjct: 453 LIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEI--------------------- 491
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
++ C P M+ SAT+T D +L +L L P+ L +
Sbjct: 492 -------VKSC---------PKGARQTMLFSATMTDDVEQLVRLSLKRPVRL------FV 529
Query: 297 LPERLESYKLI-------------------------------------CESKLKPLYLVA 319
P+R + KL+ E +P L+A
Sbjct: 530 DPKRTTAKKLVQEFVRVRGTGTGGVAGADGLAGVGQEVSSSAPSGGKRSEDAQRPALLLA 589
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
L + I+F S + H+L + FG L + E G Q R L AFR+GK
Sbjct: 590 LCTRTFTSQVIIFVRSKKLAHQLKIV---FGLLGLSAGELHGDLSQEQRIDALTAFRDGK 646
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
+ L+++D +RG+D++GV V+NYD P + Y+HR GRTARAG+ GR TL+ + + +
Sbjct: 647 VDFLIATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADRR 706
Query: 440 RFKKLLQKADNDSCPIHSIPSSL-------IESLRP 468
K ++K+ D IP+ + +E L+P
Sbjct: 707 MLKLAIKKSSADQIKHRIIPAEVAGKMLETLEELKP 742
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 199/437 (45%), Gaps = 108/437 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
G++S+ F + Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 324 GLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 383
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ +A H+ + F L
Sbjct: 384 VAILMPTRELAVQ---------CYNVATKLATHT---------DITFCQL---------- 415
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 416 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 443
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P
Sbjct: 444 DHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPK-- 486
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 295
S +T M+ SAT+T +KL ++ L+ P+ L + T
Sbjct: 487 -SRQT--------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSM 525
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E K + YL+ L + + IVF HR+ + FG L +K
Sbjct: 526 NLTQEFVRLRPGREDK-RLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIV---FGLLGLK 581
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R K+++ FREGK+ L+++D +RG+D++GV V+NY+ P + Y+H
Sbjct: 582 AAELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLH 641
Query: 416 RAGRTARAGQLGRCFTL 432
R GRTARAG+ GR T+
Sbjct: 642 RVGRTARAGRSGRACTI 658
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 186/421 (44%), Gaps = 103/421 (24%)
Query: 24 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIG---------- 109
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+ F A+ ++G+ + + VG + L
Sbjct: 110 -----------------------------EQFEALGASIGILIAVIVGGVDTVTQSLALA 140
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
KRP ++VATPGRL+DH+ T+GF L L YLV+DE DR+
Sbjct: 141 KRPH---------------------VIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L ++ + +L++ + T+L
Sbjct: 180 LNMDFEVEVEKILKVIPKERR-------TYL----------------------------- 203
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 323
SAT+T+ KL + L+ P+ + ++Y+ ++L+ Y + K K YLV +L
Sbjct: 204 --YSATMTKKVAKLERASLNDPVRIEVS-SKYQTVDKLKQYYIFIPYKYKEAYLVYILNE 260
Query: 324 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 383
+ + IVF S+ S R +L G + + G Q+ R +L F+ L
Sbjct: 261 MAGQTAIVFCSTCVSALRTALMLRKLGFGAVPL---HGQMSQAKRLGSLNKFKSKTSTTL 317
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
+ +D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T + + +V+ +++
Sbjct: 318 ICTDVASRGLDIPHVDLVLNYDVPTQSKDYVHRVGRTARAGRSGVAVTFVTQYDVEIYQR 377
Query: 444 L 444
+
Sbjct: 378 I 378
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 198/458 (43%), Gaps = 109/458 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 109 IQSKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 164
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 165 ------------------------------------QQIKEAFDSLGSLMGVRSTCIVGG 188
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 189 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 227
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 228 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 254
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 255 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQALMVVPGGL 309
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 310 KNTYLIYLLNESIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 366
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 367 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 426
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ + +++ R +++L + P ++ S+I +LR
Sbjct: 427 VSQYDLELILRIEEVLGR----KLPKENVDKSIILTLR 460
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 185/428 (43%), Gaps = 113/428 (26%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 73
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
IAE F A+ + L + VG
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLVGGI 127
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
YLV+DE DRLL E ++ L +L+ + E TFL
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILEEIPLERE-------TFL------------------- 200
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
SAT+T+ KL + L +P+ + ++Y + L+ +K K
Sbjct: 201 ------------FSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKYK 247
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 373
YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGALN 304
Query: 374 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L+
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
Query: 434 HKDEVKRF 441
++ E++ +
Sbjct: 365 NQYELEWY 372
>gi|401624697|gb|EJS42747.1| drs1p [Saccharomyces arboricola H-6]
Length = 747
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 191/432 (44%), Gaps = 110/432 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 251 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIAATRVIVLLPT 306
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+LA+QV AD + + +F LP G++
Sbjct: 307 RELAIQV----------------AD--VGKQIARF-------LP-------------GIT 328
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 329 FGLAVGGLNLRQQEQLLKTRP---------------------DIVIATPGRFIDHIRNSA 367
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 368 SFNVDSVEILVMDEADRMLEEGFQDELSEIMGLLPSNRQN-------------------- 407
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY- 304
++ SAT+ L L L P+ + + + +
Sbjct: 408 ------------------LLFSATMNSKIKSLVSLSLKRPVRIMIDPPKQAAARLTQEFV 449
Query: 305 KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
++ LKP L L++ L G+++ +VF + E+ HRL ++ G L + + E G
Sbjct: 450 RIRKRDHLKPSLLFNLIRKLDPMGQKRIVVFVARKETAHRLRIVM---GLLGMGVGELHG 506
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R ++ F+ ++ VLV +D +RG+D+ + VVNYD P + Y+HR GRTA
Sbjct: 507 SLTQEQRLDSVNKFKNLEVPVLVCTDLASRGLDIPKIEVVVNYDMPKSYEIYLHRVGRTA 566
Query: 422 RAGQLGRCFTLL 433
RAG+ GR TL+
Sbjct: 567 RAGREGRSVTLV 578
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 195/443 (44%), Gaps = 113/443 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 70
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 80 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 136
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q+ F A+ +GL + V
Sbjct: 137 QIGQQ---------------------------------------FEALGSGIGLIAAVIV 157
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 158 GGVDMAAQAMALARRP---------------------HIIVATPGRLVDHLENTKGFNLK 196
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 197 ALKFLIMDEADRILNMDFEVELDKILKVIPKERR-------TYL---------------- 233
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T+ +KL + L P ++ TRYK + L+ + + +
Sbjct: 234 ---------------FSATMTKKVSKLERASLRDPARVSVS-TRYKTVDNLKQHYIFIPN 277
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI-------KIKEYSGLQ 363
K K YLV LL IVF ++ + ++ +L G + +++ LQ
Sbjct: 278 KYKETYLVYLLNEHAGNSAIVFCATCATAMQIAVMLRQLGMQAVPLHGQMSQVRFERPLQ 337
Query: 364 RQSVRSK--TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
S+ + +L F+ +LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTA
Sbjct: 338 VGSLEKRLGSLNKFKSKARDILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTA 397
Query: 422 RAGQLGRCFTLLHKDEVKRFKKL 444
RAG+ G T++ + +V+ ++K+
Sbjct: 398 RAGRSGLAITVVTQYDVEGYQKI 420
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 181/429 (42%), Gaps = 106/429 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 154 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 212
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ F A+ ++ L
Sbjct: 213 ELAAQIGQ---------------------------------------TFEALGASISLRC 233
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 234 AVVVGGLDMVSQSTALGKKPH---------------------IVVATPGRLLDHLEKTKG 272
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 273 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 310
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 311 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 354
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 364
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 355 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL-----HGQLS 409
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 410 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 469
Query: 425 QLGRCFTLL 433
+ GR +++
Sbjct: 470 RSGRAISII 478
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 181/429 (42%), Gaps = 106/429 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ F A+ ++ L
Sbjct: 189 ELAAQIGQ---------------------------------------TFEALGASISLRC 209
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 210 AVVVGGLDMVSQSTALGKKPH---------------------IVVATPGRLLDHLEKTKG 248
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 249 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 286
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 287 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 330
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 364
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 331 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL-----HGQLS 385
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 386 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 445
Query: 425 QLGRCFTLL 433
+ GR +++
Sbjct: 446 RSGRAISII 454
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 199/466 (42%), Gaps = 107/466 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
M S P+Q E I L +D+ + TGSGKT ++A+PI+Q+L A L
Sbjct: 89 MKFSKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE-AQTPYFGL 143
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ P R+LA Q+ K+ F A+
Sbjct: 144 VLAPARELAYQI---------------------------------------KETFDALGS 164
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG + D+ +L+++P I++ATPGR+MDH
Sbjct: 165 TMGVRTVCLVGGMDMMDQARDLMRKPH---------------------IIIATPGRIMDH 203
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L+ L Y V+DE D+LL + L +L+ S +T+L
Sbjct: 204 LEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKR-------TTYL------ 250
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T KL + LH+P+ + ++Y+ +
Sbjct: 251 -------------------------FSATMTNKIEKLQRASLHNPVRVAVS-SKYQTADN 284
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L ++ K YL+ LL + I+F + T R L G + +
Sbjct: 285 LIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPL---H 341
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R +L F+ G +L+++D RG+D+ V+ V+NYD P K Y+HR GRT
Sbjct: 342 GDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRT 401
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
ARAG+ G+ +L+ + +++ + ++ Q S P +++++L
Sbjct: 402 ARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDAL 447
>gi|357121637|ref|XP_003562524.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 447
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 191/458 (41%), Gaps = 119/458 (25%)
Query: 14 WQE-------TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
W+E I L RDL TGSGKT ++ALPI+Q L + A V+ PTR
Sbjct: 38 WKEPTKIQAGAIPHALQGRDLIGLGQTGSGKTGAFALPIIQALLEHR-QPFFACVMSPTR 96
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA+Q IAE F A+ A+GL
Sbjct: 97 ELAIQ---------------------IAEQ------------------FEALGSAIGLVC 117
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG ++ + KRP I+V TPGRL+DH+ T+G
Sbjct: 118 SVLVGGVDRMQQVLSIAKRPH---------------------IVVGTPGRLLDHLKDTKG 156
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L + YLV+DE D+LL ++ L +L+ + T+L
Sbjct: 157 FSLNKVKYLVLDEADKLLNLEFKESLDDILKAIPKERR-------TYL------------ 197
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T+ KL + L +P+ + ++Y + L+
Sbjct: 198 -------------------FSATMTKKVAKLQRACLRNPVKVEV-SSKYSTVDTLKQEWY 237
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ K YLV L L ++F + EST L L + G K SG Q
Sbjct: 238 FVPAAYKDCYLVHALNELPGSMIMIFVRTCESTRLLALTLRNLG---FKALSISGQMSQD 294
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+
Sbjct: 295 KRLGALNKFKAKDFNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGKS 354
Query: 427 GRCFTLLHKDEVKRFKKL---------LQKADNDSCPI 455
G +L+++ E + FK + L+K D+D I
Sbjct: 355 GYAVSLVNQYEGQWFKMIEALLGKEIDLRKVDSDEIMI 392
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 195/439 (44%), Gaps = 105/439 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + + + + L RD+ + TGSGKT ++ALPI+Q L + L A ++ PTR
Sbjct: 39 FKIPTEIQVQALPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACIMAPTR 97
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS- 125
+LA Q++ Q++ A+ A+G+
Sbjct: 98 ELAYQISQ-----------------------------------QIE----ALGSAMGVRC 118
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
V L G +A ++ L KRP I+VATPGRL DH+ T+
Sbjct: 119 VTLVGGMDKMAQAVA-LAKRPH---------------------IVVATPGRLNDHLEDTK 156
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
GF+L L +LV+DE DRLL D + FG +
Sbjct: 157 GFSLRGLKFLVLDEADRLL-----------------DMD-------------FGPI---- 182
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 305
+++ K P R + SAT+T KL + L +P+ + E +Y L Y
Sbjct: 183 ---IDKILKAIPRER-TTYLFSATMTTKVAKLQRASLSNPVRVEVSE-KYSTVSTLLQYY 237
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
L K ++L+ L L + I+FT +V RL +L G + + G Q
Sbjct: 238 LFIPLVQKDVHLIYLANILAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH---GQLSQ 294
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
S R L F+ G +VLV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+
Sbjct: 295 SARLGALGKFKSGGRKVLVATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGR 354
Query: 426 LGRCFTLLHKDEVKRFKKL 444
G+ TL+ + +V+ +++
Sbjct: 355 SGKSITLVTQYDVELIQRI 373
>gi|330794252|ref|XP_003285194.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
gi|325084915|gb|EGC38333.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
Length = 434
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +ETI L RD+ + TGSGKT ++ +P++Q L + + + L + PTR+LA Q
Sbjct: 36 IQRETIPWALKGRDIIGLAQTGSGKTGAFVIPVLQKLLEQP-QGIFCLCIAPTRELAFQ- 93
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
IAE F A+ +G+ + VG
Sbjct: 94 --------------------IAEQ------------------FNALGATIGVKTCVLVGG 115
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ +L K+P I++ +PGR++ H+ T+GF L +
Sbjct: 116 IDSMTQSLQLAKKPH---------------------IIIGSPGRIIFHLENTKGFNLRSI 154
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
Y ++DE DRL ++ + +L++ + +TFL
Sbjct: 155 KYFIMDEADRLFGADFEEEVNNILKVIPKER-------NTFL------------------ 189
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + T+Y+ + L L K
Sbjct: 190 -------------FSATMTSKVAKLQRASLVNPVKIQVA-TKYQTVDTLIQQYLFIPFKY 235
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV +L L I+FTS+ S++++ +L + G I I +G Q+ R +L
Sbjct: 236 KECYLVYILNELAGNLTIIFTSTCASSNKVTLMLRNLGLAAIPI---NGDMDQAKRLASL 292
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F++G +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG GR TL
Sbjct: 293 SKFKQGTKSILVATDVAARGLDIPMVDLVINYDVPTNSKEYIHRVGRTARAGNSGRAITL 352
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 353 VTQYDVEMYQRI 364
>gi|167379929|ref|XP_001735325.1| ATP-dependent RNA helicase DBP6 [Entamoeba dispar SAW760]
gi|165902737|gb|EDR28474.1| ATP-dependent RNA helicase DBP6, putative [Entamoeba dispar SAW760]
Length = 502
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 213/484 (44%), Gaps = 105/484 (21%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI L+P+Q V Q + D+ + +PTGSGKTL+Y LP+++ L N ++ +V
Sbjct: 86 GIKELYPMQKIVQQFIFTT---DTDIAVRAPTGSGKTLAYTLPLLK-LINPLFNHIQTVV 141
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
++PT L LQV++ + P +K + +
Sbjct: 142 LIPTLPLVLQVSN-------------------------------VMKPLLKTINCNLT-- 168
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
++G+SSI E S C ++V TP RL++H+
Sbjct: 169 -------SLGESSIEKETS------------CNS------------HVIVTTPIRLLNHL 197
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
+ + L+ L YL+ DETD+LL +P + L + S P +
Sbjct: 198 SKS-TLDLKWLKYLIYDETDKLLT------IPALFPLLNMIKKQYIS------PQYMVDI 244
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 290
KT + V + + ++ SATL+ P QL ++ PL LT
Sbjct: 245 KTGKSLNVFSSSTN----QFRSLLFSATLSSSPKAFKQLQMNKPLLLTFDDSFVRDINEI 300
Query: 291 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
+T+Y LP +E+ K L ++ LL++ G K I+F +S + L L+
Sbjct: 301 TQTKYVLPSTIENRYTPVLPVEKDLVVLELLKTSG--KSIIFCNSNNTAFVLFRLIQEMA 358
Query: 351 ELRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 406
E K K+ G +Q + K +K I V V++D M+RG+D++ + V+N+D
Sbjct: 359 EFIGKNKKEIGCIISSMKQKEKLKVIKKVENDSIDVFVTTDLMSRGIDIKRLKTVINFDC 418
Query: 407 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
P + Y+HRAGRT RAG G C T++ +EV K L+K +N+ +H +P + ESL
Sbjct: 419 PVSTQLYVHRAGRTGRAGNEGICHTIVLTNEVGNLKSYLKKMNNE---LHKVPVIVEESL 475
Query: 467 RPVY 470
Y
Sbjct: 476 TKSY 479
>gi|392597372|gb|EIW86694.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 750
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 200/458 (43%), Gaps = 123/458 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G + P+QVA I L +D+ N+ TGSGKT ++ +P+++ L ++
Sbjct: 196 LGFNKPTPIQVAA----IPVALIGKDIVGNAVTGSGKTAAFVIPMLERLLYREKGKSAAA 251
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R L+++PTR+L +Q C + +A ++ A
Sbjct: 252 TRCLILVPTRELGVQ---------CYEVAQKLAAYTDAR--------------------- 281
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
+ L VG S+ + + L RP D+++ATPGR
Sbjct: 282 ---------IALVVGGLSLKSQEAALRTRP---------------------DVVIATPGR 311
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DHI+ + F L+ L LV+DE DR+L E + L +
Sbjct: 312 LVDHIHNSPSFNLDALDILVLDEADRMLSEGFADELSEI--------------------- 350
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
I+ C P R M+ SAT+T ++L ++ L+ P+ L +
Sbjct: 351 -------IKAC---------PKSRQT-MLFSATMTDSVDELVKMSLNKPVRL------FV 387
Query: 297 LPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
P R + L+ E + LVAL Q IVF S + H++ +
Sbjct: 388 DPRRTTARGLVQEFVRVRAEKETERSSLLVALCQRTFTSGVIVFFRSKKLAHQMRII--- 444
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
F L +K +E G Q R + L+ FR+G++ L+++D +RG+D++G+ V+NYD P
Sbjct: 445 FRMLDMKCEELHGDLTQEQRLQALQLFRDGQVNFLMATDLASRGLDIKGIETVINYDMPN 504
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
Y+HR GRTARAG+ GR TL+ + + K K +++
Sbjct: 505 QAAQYLHRVGRTARAGKTGRSLTLVGEADRKMLKSVIK 542
>gi|326475893|gb|EGD99902.1| ATP-dependent RNA helicase DBP6 [Trichophyton tonsurans CBS 112818]
Length = 812
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 169/344 (49%), Gaps = 51/344 (14%)
Query: 2 GISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V LRAL
Sbjct: 240 GYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAKLRAL 299
Query: 61 VVLPTRDLALQVNSARCKYCCKN----IFGLIADHSIAEMCVQFDSLLFISLPQ-VKDVF 115
+++PTR+L QV A C+ C I + ++ + Q + + P+ +
Sbjct: 300 IIVPTRELVKQVRDA-CELCSSGSGLRIGTAVGSTALKDEQAQIMEQISVYRPESTRSQN 358
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
I A + V + A+E S+ + +E+ C VD+L+ TPG
Sbjct: 359 GTIMTADEWASFSLVDYIAEAEEYSKTLPDHCIESSPC-------------VDVLICTPG 405
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI +T+GFTL L +LV+DE DRLL E++Q W+ TVL + + P
Sbjct: 406 RLVDHIRSTKGFTLGSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------P 455
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET 293
+A GSL+ + + F R L K++LSAT+T+D KL L LH+P L + G
Sbjct: 456 AATGSLEELIKA-----FNHPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAE 510
Query: 294 RYK-------------LPERL-ESYKLICESKLKPLYLVALLQS 323
R + LP L ES + + KPLYL+ LLQS
Sbjct: 511 RDEAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 200/436 (45%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V R
Sbjct: 330 VGFSAPTPIQ----RKAIPVGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKVPTSR 385
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
++++PTR+LA+Q C N+ A + + F L
Sbjct: 386 VVILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 417
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L +RP D+++ATPGR +
Sbjct: 418 -----------VGGFSLREQENVLKQRP---------------------DVIIATPGRFI 445
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 446 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 490
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 491 QT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQTVG 527
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YLV L Q++ + IVF + HR + FG L +K
Sbjct: 528 TLVQEFVRLRPGREGKRMGYLVLLCQTVYTNRVIVFFRQKKEAHRARIV---FGLLGLKA 584
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P + Y+HR
Sbjct: 585 AELHGSMSQEQRIHAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHR 644
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 645 VGRTARAGRSGRACTI 660
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 192/430 (44%), Gaps = 105/430 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +DL + TGSGKT ++ALPI+Q L + + L A V+ PTR+LA+Q
Sbjct: 69 IQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLDTP-QVLFACVLSPTRELAIQ- 126
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
IAE F A+ +GL + VG
Sbjct: 127 --------------------IAEQ------------------FEALGSGIGLKCAVLVGG 148
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ L KRP I+V TPGRLMDH++ T+GF+L +
Sbjct: 149 VDHTQQAIALAKRP---------------------HIVVGTPGRLMDHLSNTKGFSLRTM 187
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + ++ + +L +
Sbjct: 188 KYLVLDEADRLLNDDFEKAIDEILSVI--------------------------------- 214
Query: 253 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PR K L SAT+T+ KL + L +P+ + ++Y + L+ +K
Sbjct: 215 ------PRERKTYLFSATMTKKVRKLQRACLRNPVKIEVA-SKYSTVDTLKQQYRFVPAK 267
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K YLV +L L +VFT + ++T L LL + G I I SG Q+ R
Sbjct: 268 YKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPI---SGHMSQAKRLGA 324
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L F+ G+ +L+ +D +RG+D+ V+ V+NYD P+ K YIHR GRTARAG+ G +
Sbjct: 325 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAIS 384
Query: 432 LLHKDEVKRF 441
L+++ E++ +
Sbjct: 385 LVNQYELEWY 394
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 199/466 (42%), Gaps = 107/466 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
M S P+Q E I L +D+ + TGSGKT ++A+PI+Q+L A L
Sbjct: 1 MKFSKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE-AQTPYFGL 55
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ P R+LA Q+ K+ F A+
Sbjct: 56 VLAPARELAYQI---------------------------------------KETFDALGS 76
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ VG + D+ +L+++P I++ATPGR+MDH
Sbjct: 77 TMGVRTVCLVGGMDMMDQARDLMRKPH---------------------IIIATPGRIMDH 115
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L+ L Y V+DE D+LL + L +L+ S +T+L
Sbjct: 116 LEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKR-------TTYL------ 162
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T KL + LH+P+ + ++Y+ +
Sbjct: 163 -------------------------FSATMTNKIEKLQRASLHNPVRVAV-SSKYQTADN 196
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L ++ K YL+ LL + I+F + T R L G + +
Sbjct: 197 LIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPL---H 253
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ R +L F+ G +L+++D RG+D+ V+ V+NYD P K Y+HR GRT
Sbjct: 254 GDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRT 313
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 466
ARAG+ G+ +L+ + +++ + ++ Q S P +++++L
Sbjct: 314 ARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDAL 359
>gi|296394809|ref|YP_003659693.1| DEAD/DEAH box helicase [Segniliparus rotundus DSM 44985]
gi|296181956|gb|ADG98862.1| DEAD/DEAH box helicase domain protein [Segniliparus rotundus DSM
44985]
Length = 452
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 196/449 (43%), Gaps = 111/449 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRA 59
G+++ FP+Q A + P L RD+ PTGSGKTL++ LP++ L+N A R R
Sbjct: 23 GVTAPFPIQAAA----LPPALEGRDVLGRGPTGSGKTLTFGLPMLARLANGASKPRKPRG 78
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV++PTR+LA QV SA +A
Sbjct: 79 LVLVPTRELAAQVASA---------------------------------------LTPLA 99
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
+VGL VG S+ +I EL + VD+LVATPGRL D
Sbjct: 100 ASVGLRTASVVGGLSMQRQIDELAR---------------------GVDVLVATPGRLAD 138
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ A L+ + +DE D++ A +LP V+++
Sbjct: 139 HL-AQGTVVLDEVSVTALDEADQM---ADMGFLPQVVKIL-------------------- 174
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
D+ + +++ SATL +KL + L +P +T +
Sbjct: 175 ---------------DRTPKKGQRLLFSATLDGQVDKLVRRYLDNPATCSTAPAAASV-S 218
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+E + L + + K L + + E + I+F + RL L G +
Sbjct: 219 TMEHHMLFVDQEQKKLVVTEIAAR--EGRTILFVHTKHGADRLTKRLRAVG---VSAAAI 273
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G + Q+ R++TL+AF+ G + VLV+++ RG+ ++GV+ VV+ D PA K Y+HRAGR
Sbjct: 274 HGGKAQNNRTRTLEAFKSGDVAVLVATNVAARGVHIDGVDLVVHVDPPADPKDYLHRAGR 333
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
TARAG+ G TL+ E + + + + A
Sbjct: 334 TARAGESGVVITLVTPAERRDAEAMARAA 362
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 182/439 (41%), Gaps = 105/439 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E I L RDL + TGSGKT ++ LPI+Q L ++ + L +L
Sbjct: 69 LGYKAPTPIQA----EAIPLALQGRDLIGLAETGSGKTAAFVLPILQALMDKP-QQLHSL 123
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ + A+
Sbjct: 124 ILAPTRELAYQIS---------------------------------------EAVEALGS 144
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ + + VG + + L K+P ++VATPGRL+DH
Sbjct: 145 LIAVRCAVLVGGMDMITQAIALGKKPH---------------------VIVATPGRLLDH 183
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L YLV+DE DRLL + L +L++ + +
Sbjct: 184 LENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKILKILPREGRKTY------------- 230
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ SAT++ L + L +PL + + +Y+
Sbjct: 231 ------------------------LFSATMSSKVESLQRASLSNPLRVAVSQDKYQTVST 266
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L K K LYL+ +L I+FT +V R+ LL G I I
Sbjct: 267 LIQSYLFIPHKHKDLYLIHILNEHAGHTGIIFTRTVNEAQRVSILLRTLGFSAIPIH--- 323
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L FR +LV+SD RG+D+ V+ V+N+D P KTYIHR GRT
Sbjct: 324 GQLSQQARLAALNKFRAKSRNLLVASDVAARGLDIPSVDLVINFDLPQDSKTYIHRVGRT 383
Query: 421 ARAGQLGRCFTLLHKDEVK 439
ARAG+ G + + + +V+
Sbjct: 384 ARAGKSGLAISFVTQYDVE 402
>gi|345563744|gb|EGX46729.1| hypothetical protein AOL_s00097g477 [Arthrobotrys oligospora ATCC
24927]
Length = 854
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 193/444 (43%), Gaps = 105/444 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLP 64
F A+ TI L RD+ + TGSGKT +Y +PI++ L R V R +++ P
Sbjct: 339 FTTPTAIQSRTIPIALLARDIVGGAVTGSGKTAAYMVPILERLLYRPKKVAQTRVVILTP 398
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+QV H++A F + F
Sbjct: 399 TRELAIQV------------------HAVAVKLAAFTDIKFT------------------ 422
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
LAVG S+ + +EL +RP DI++ATPGR +DH+ +
Sbjct: 423 ---LAVGGLSLKAQEAELRQRP---------------------DIVIATPGRFIDHMRNS 458
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F + + LV+DE DR+L + + L +L KT+
Sbjct: 459 ASFHTDGIEILVLDEADRMLEDGFADELDEIL-------------------------KTL 493
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
P R M+ SAT+T +KL ++ + P+ L + + + +
Sbjct: 494 ------------PKSRQT-MLFSATMTDSVDKLVRVGMQKPVRLLVDSKKSTVATLTQEF 540
Query: 305 KLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
I + + LV L L + +CIVF S HR+ + FG L +K E G
Sbjct: 541 IRIRPGREGGRLAMLVLLATELYKSRCIVFFRSKVYAHRVRII---FGLLGLKAAELHGS 597
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R K ++ FR+G + L+++D +RG+D++ V+ V+N++ P + Y HR GRTAR
Sbjct: 598 LSQEQRIKAVEQFRDGTVDFLLATDLASRGLDIKNVSYVINFELPQSHEIYTHRVGRTAR 657
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQ 446
AG+ GR TL + + K KK ++
Sbjct: 658 AGRSGRAITLAAEADRKIVKKAIK 681
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 186/433 (42%), Gaps = 101/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 76 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQR-FYALILAPTRELCLQ 134
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
++ A+ +G++V VG
Sbjct: 135 ISQQ---------------------------------------ILAMGGTLGVTVVTLVG 155
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L K+P ++V +PGR++DH+ T+GF+L+
Sbjct: 156 GLDHNTQAIALAKKP---------------------HVVVGSPGRVVDHLQQTKGFSLKS 194
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
+ LV+DE DRLL + A L +L+ S E +
Sbjct: 195 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ------------------------- 229
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
M+ SAT+T +KL + L P+ L ++Y + L+ + L+ K
Sbjct: 230 -----------TMLFSATMTTKVSKLQKASLKKPVKLEV-NSKYDVASHLQQHFLLVPFK 277
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
LK +L A L L IVFT++ + + L H G + + G Q R
Sbjct: 278 LKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRHLGFQSVCLH---GKMTQPQRIGA 334
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR + LV+++ +RG+D+ V V+N+D P K YIHR GRTARAG+ GR T
Sbjct: 335 LTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALT 394
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ ++++
Sbjct: 395 IVTQYDVEAYQRI 407
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 185/432 (42%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E + L RD+ + TGSGKT ++ALPI+Q L N + L A V+ PTR+LA Q+
Sbjct: 41 IQAEALPHALEGRDIIGVASTGSGKTAAFALPIIQALWNDP-KGLFACVIAPTRELAYQI 99
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ F A+ +G+ + +G
Sbjct: 100 SQQ---------------------------------------FEALGSGIGVRCAVIIGG 120
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL H+ T+GF+L L
Sbjct: 121 MDVVSQSIALAKKPH---------------------IIVATPGRLNYHLENTKGFSLRGL 159
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+ V+DE DRLL + + +L++ + +T+L
Sbjct: 160 KFFVLDEADRLLDMDFGPDIDKILKVIPKER-------TTYL------------------ 194
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + ++Y L Y L
Sbjct: 195 -------------FSATMTTKVAKLQRASLQNPVRVEV-SSKYSTVSTLLQYYLFMPLSH 240
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K ++LV L +L + ++FT +V +L +L G + + G QS R L
Sbjct: 241 KEVHLVNLANTLAQNSMMIFTRTVHDAQKLSIILRTLGFPAVPLH---GQLSQSQRLGAL 297
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 298 SKFKSGGRSILVATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSITL 357
Query: 433 LHKDEVKRFKKL 444
+ + +++ ++
Sbjct: 358 VTQYDIELIHRI 369
>gi|326483004|gb|EGE07014.1| ATP-dependent RNA helicase dbp6 [Trichophyton equinum CBS 127.97]
Length = 812
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 169/344 (49%), Gaps = 51/344 (14%)
Query: 2 GISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V LRAL
Sbjct: 240 GYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAKLRAL 299
Query: 61 VVLPTRDLALQVNSARCKYCCKN----IFGLIADHSIAEMCVQFDSLLFISLPQ-VKDVF 115
+++PTR+L QV A C+ C I + ++ + Q + + P+ +
Sbjct: 300 IIVPTRELVKQVRDA-CELCSSGSGLRIGTAVGSTALKDEQAQIMEQISVYRPESTRSQN 358
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
I A + V + A+E S+ + +E+ C VD+L+ TPG
Sbjct: 359 GTIMTADEWASFSLVDYIAEAEEYSKTLPDHCIESSPC-------------VDVLICTPG 405
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DHI +T+GFTL L +LV+DE DRLL E++Q W+ TVL + + P
Sbjct: 406 RLVDHIRSTKGFTLGSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------P 455
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET 293
+A GSL+ + + F R L K++LSAT+T+D KL L LH+P L + G
Sbjct: 456 AATGSLEELIKA-----FSHPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAE 510
Query: 294 RYK-------------LPERL-ESYKLICESKLKPLYLVALLQS 323
R + LP L ES + + KPLYL+ LLQS
Sbjct: 511 RDEAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 110/449 (24%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
+ I L ++D+ + TGSGKT ++A+PI+Q L ++ R AL++ PTR+LALQV
Sbjct: 33 KAIPAALRKKDIVGLAETGSGKTAAFAIPILQDLLSKP-RHNFALILTPTRELALQV--- 88
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
+C +F + GL V VG +
Sbjct: 89 KC------------------------------------LFMELGDKFGLKVVCLVGGQHV 112
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
D++ +L KR K ++V TPGR++ H+ T+ L H+ Y
Sbjct: 113 EDQVRDL-KRLKFH-------------------VIVGTPGRVVYHLENTKELRLNHVRYF 152
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE D++L + ++ L ++
Sbjct: 153 VLDEADQMLEDTFEQQLAFIIT-------------------------------------- 174
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
K +P + SAT+TQ+ +K+ ++ P+ L ++Y ++L+ + K K
Sbjct: 175 KLHPNKQTFLYSATMTQNVDKIRKVCTKSPVILEVS-SKYSKVDKLDHAFVFIPDKEKDF 233
Query: 316 YLVALL---QSLGEEKCIVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKT 371
YL+ LL +S + + I+FTS+ + R+ +L + + +G+ +Q R +
Sbjct: 234 YLIYLLLSSKSADKSRSIIFTSTWRESFRIVAMLKSLADVISAASAPLNGVMQQDKRQSS 293
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD---KPAY---IKTYIHRAGRTARAGQ 425
L FR G++ +LV++D +RG+D V+ V+NYD +P++ K YIHR GRTARAG+
Sbjct: 294 LFDFRTGRVSILVATDLASRGLDFPDVDLVINYDVPRRPSWSDSAKAYIHRVGRTARAGR 353
Query: 426 LGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
GR T + V R K ++ A N+ P
Sbjct: 354 HGRAITFVTPYSVTRLKA-IESALNERIP 381
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 186/433 (42%), Gaps = 101/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 76 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQR-FYALILAPTRELCLQ 134
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
++ A+ +G++V VG
Sbjct: 135 ISQQ---------------------------------------ILAMGGTLGVTVVTLVG 155
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L K+P ++V +PGR++DH+ T+GF+L+
Sbjct: 156 GLDHNTQAIALAKKP---------------------HVVVGSPGRVVDHLQQTKGFSLKS 194
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
+ LV+DE DRLL + A L +L+ S E +
Sbjct: 195 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ------------------------- 229
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
M+ SAT+T +KL + L P+ L ++Y + L+ + L+ K
Sbjct: 230 -----------TMLFSATMTTKVSKLQKASLKKPVKLEV-NSKYDVASHLQQHFLLVPFK 277
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
LK +L A L L IVFT++ + + L H G + + G Q R
Sbjct: 278 LKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRHLGFQSVCLH---GKMTQPQRIGA 334
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR + LV+++ +RG+D+ V V+N+D P K YIHR GRTARAG+ GR T
Sbjct: 335 LTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALT 394
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ ++++
Sbjct: 395 IVTQYDVEAYQRI 407
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 212/487 (43%), Gaps = 125/487 (25%)
Query: 2 GISSLFPVQVAVWQETIGP-GLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+SSL ++ V Q + P L +D+C +S TGSGKT ++ALPI++ L R V R
Sbjct: 127 AVSSLGFIKPTVIQSMVIPVALQGKDVCASSRTGSGKTAAFALPILERLLYRPRRVAATR 186
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF-DSLLFISLPQVKDVFAA 117
LV+ PTR+LA+Q H++ E F D +I + VK+
Sbjct: 187 VLVLTPTRELAVQA------------------HAMMEKLAAFTDIRCYIVIGGVKNQL-- 226
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+ +EL K+P D++VATPGR+
Sbjct: 227 --------------------QETELRKKP---------------------DVVVATPGRM 245
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ G E L LV+DE DRLL + + ++++
Sbjct: 246 IDHLRNAPGIGFEALEILVLDEADRLLEMGFTEEVQELVKM------------------- 286
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT------TG 291
C +R M+ SAT+T D +KLA L P+ +T T
Sbjct: 287 ---------CPQQRQ----------TMLFSATMTHDVDKLAAFSLRRPVRVTADGSIRTD 327
Query: 292 ETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 343
ET+ L + L+ E K + L+ L ++ IVF HRL
Sbjct: 328 ETQGTLNKVAVPSSLLQEFVRIRKEHEKDREAILLCLCTRTFHKRTIVFCREKRRAHRLR 387
Query: 344 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 403
+ FG L ++++E G Q+ R + L+ F+E K L+++D RG+D++GV+ VVN
Sbjct: 388 II---FGLLGLRVEELHGNLTQAQRLEALENFKEEKSDFLLATDLAGRGLDIKGVDVVVN 444
Query: 404 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ---KADNDSCPIHSIPS 460
+ P + Y+HR GRTARAG+ GR TL D+ +R K +L+ ++ D +P
Sbjct: 445 LEVPRNLAEYVHRVGRTARAGRKGRAVTLA--DDSQRTKSMLKEVVRSAPDVVKRRVVPP 502
Query: 461 SLIESLR 467
I ++R
Sbjct: 503 DAIAAMR 509
>gi|226295059|gb|EEH50479.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides brasiliensis
Pb18]
Length = 852
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 151/291 (51%), Gaps = 37/291 (12%)
Query: 2 GISSLFPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
G+ FP+Q AV + E PG DLCI++ TGSGKTL+Y LP+V+ + A+
Sbjct: 278 GLIRPFPIQAAVLELLFKGENRHPG----DLCISAATGSGKTLAYTLPMVEGIEQSAIPQ 333
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
LR LV++PTR+L Q A C+ C GL ++ ++ + L I L Q+ F+
Sbjct: 334 LRGLVIVPTRELVKQARDA-CELCSSGT-GLRIGTAVGTTSLKEEQALLIKLDQLYSPFS 391
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD--PEDVLQELQSAVDILVATP 174
+ LS + A + E I EA + + P V +DIL++TP
Sbjct: 392 SQT----LSEQSMSSEDWAAFNLQEYI----AEANVSHKALPNHVTTS-SPCIDILISTP 442
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+DHI T+GFTLEHL +LVVDE DRLL E++Q W+ VL + + S + FL
Sbjct: 443 GRLVDHIRCTQGFTLEHLEWLVVDEADRLLNESFQEWIKVVLPALEMERIDSNSKSGIFL 502
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 285
+ G C V R +L K++LSAT+T+D KL L L +P
Sbjct: 503 -NQLG-------CQVRRR-------QLQKIILSATMTRDIPKLISLRLRNP 538
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 330 IVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
+VFT S ES RL LL L +I + + + +TL A+R GK+ +++++D
Sbjct: 677 LVFTKSSESASRLARLLALMHPPLAKRIGTLTKSNKSTTSRRTLSAYRNGKVSIVIATDC 736
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+RG+D+ + +VVNYD PA + +YIHR GRTARAG G +T + E + F + K
Sbjct: 737 ASRGLDLPSLTHVVNYDVPASLTSYIHRVGRTARAGNSGSAWTFVAHREGRWFSNEIMK- 795
Query: 449 DNDSCP 454
CP
Sbjct: 796 ----CP 797
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 189/438 (43%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+P + ++I L +D+ + TGSGKT ++ALP++Q L + R LV+ PTR
Sbjct: 57 WPAASPIQIQSIPHALNGKDVIGLAQTGSGKTGAFALPVLQDLLHEP-RAFHTLVLSPTR 115
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ + F + +G+
Sbjct: 116 ELA---------------------------------------SQIAEQFECLGKDIGVKC 136
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + ++ KRP +LV TPGR++DH+ T+G
Sbjct: 137 AVLVGGMDMTSQSLQIGKRPH---------------------VLVGTPGRVVDHLENTKG 175
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L L++DE DRLL ++ + T+L++
Sbjct: 176 FSLRQLKVLILDEADRLLNLDFEEEIDTILKVI--------------------------- 208
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
P R ++ SAT+T NKL + L P+ + ++Y + L+ L
Sbjct: 209 ----------PRERRTQL-FSATMTSKVNKLQRACLRDPVKVEVA-SKYSTVKSLKQNYL 256
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+K K Y LL L ++FT + E T +L + + G I I G Q
Sbjct: 257 FVPAKHKECYACYLLNELSASTIMMFTRTCEQTRKLALVARNLGFSAIPI---HGQMSQP 313
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R L F+ G+ +LV++D +RG+D+ V+ V+N+D P K Y+HR GRTARAG+
Sbjct: 314 KRQGALNKFKGGERNILVATDVASRGLDIPSVDVVINFDVPMNSKDYVHRVGRTARAGRS 373
Query: 427 GRCFTLLHKDEVKRFKKL 444
G TL+ + +V+ ++K+
Sbjct: 374 GLAITLVTQYDVELYQKI 391
>gi|390604335|gb|EIN13726.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 785
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 204/469 (43%), Gaps = 124/469 (26%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVR--CLRALVVL 63
P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L +RA + R LV++
Sbjct: 223 PIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLLYRDRAKKSAATRCLVLV 278
Query: 64 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 123
PTR+L +Q C + +A ++ C
Sbjct: 279 PTRELGVQ---------CFEVGTKLATYTDIRFC-------------------------- 303
Query: 124 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 183
LAVG S+ + + L +P D+++ATPGRL+DH+
Sbjct: 304 ----LAVGGLSVKSQEAALRSKP---------------------DVVIATPGRLIDHLRN 338
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
+ F L+ L LV+DE DR+L + + L +
Sbjct: 339 SPSFNLDALDILVLDEADRMLSDGFADELAEI---------------------------- 370
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
I+ C P R M+ SAT+T ++L ++ L P+ L + P+R +
Sbjct: 371 IKSC---------PKSRQT-MLFSATMTDSVDELVKMSLDKPVRL------FVDPKRSTA 414
Query: 304 YKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
LI E + LVAL + + I+F S + H++ + F L +K
Sbjct: 415 KGLIQEFVRVRAGKESERSAILVALCKRTFKSGVIIFFRSKKLAHQMRIV---FSLLYMK 471
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R K L+ FR+G + L+++D +RG+D++GV+ V+NYD P + Y+H
Sbjct: 472 CAELHGDLTQEQRLKALQQFRDGSVDFLMATDLASRGLDIKGVDIVINYDMPGQLAQYLH 531
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSLI 463
R GRTARAG+ GR TL+ + + K K ++ D H I PS I
Sbjct: 532 RVGRTARAGKKGRSVTLVGEADRKMLKAAIKHGAGDDQVRHRIVPSEAI 580
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 184/429 (42%), Gaps = 115/429 (26%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 73
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
IAE F A+ + L + VG
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLVGGI 127
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
YLV+DE DRLL E ++ L +L+
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILE------------------------------------ 190
Query: 254 KDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
PR K L SAT+T+ KL + L +P+ + ++Y + L+ +K
Sbjct: 191 ---EIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKY 246
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGAL 303
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L
Sbjct: 304 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISL 363
Query: 433 LHKDEVKRF 441
+++ E++ +
Sbjct: 364 VNQYELEWY 372
>gi|259147982|emb|CAY81231.1| Drs1p [Saccharomyces cerevisiae EC1118]
Length = 754
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 258 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 313
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 314 RELAIQV---------------------------------------ADVGKQIARFVSGI 334
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 335 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 373
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 374 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 414
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 415 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 449
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 450 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 506
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 507 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 566
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 567 HRVGRTARAGREGRSVTFV 585
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V R
Sbjct: 337 VGFSAPTPIQ----RKAIPVGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKVPTSR 392
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 393 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 424
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L +RP D+++ATPGR +
Sbjct: 425 -----------VGGFSLREQENVLKQRP---------------------DVIIATPGRFI 452
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L
Sbjct: 453 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILN--------------------- 491
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
TI P R M+ SAT+T +KL ++ L+ P+ L ++ +
Sbjct: 492 ----TI------------PKSRQT-MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHTVG 534
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YLV L ++ + IVF + HR + FG L +K
Sbjct: 535 TLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARII---FGLLGLKA 591
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P + Y+HR
Sbjct: 592 AELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHR 651
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 652 VGRTARAGRSGRACTI 667
>gi|401400548|ref|XP_003880804.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
gi|325115216|emb|CBZ50771.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
Length = 462
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 187/433 (43%), Gaps = 101/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 58 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQQLLQRTQR-FYALILAPTRELCLQ 116
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
++ A+ ++G++V VG
Sbjct: 117 ISQQ---------------------------------------MLAMGGSLGVTVVTLVG 137
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ L K+P ++V +PGR++DH+ T+GF+L+
Sbjct: 138 GLDHNTQAIALAKKP---------------------HVVVGSPGRVVDHLQQTKGFSLKS 176
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
+ LV+DE DRLL + A L +L+ S E +
Sbjct: 177 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ------------------------- 211
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
M+ SAT+T +KL + L P+ L ++Y + L+ + L+ K
Sbjct: 212 -----------TMLFSATMTTKVSKLQKASLKKPVKLEV-NSKYDVASLLQQHFLLVPFK 259
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
LK +L A L L IVFT++ + + L H G + + G Q R
Sbjct: 260 LKHTHLAAALLHLSPSSVIVFTNTCANARTIALFLRHLGFQSVCLH---GKMTQPQRIGA 316
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR + LV+++ +RG+D+ V V+N+D P K YIHR GRTARAG+ GR T
Sbjct: 317 LTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALT 376
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ ++++
Sbjct: 377 IVTQYDVEAYQRI 389
>gi|326504546|dbj|BAJ91105.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508600|dbj|BAJ95822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 456
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 180/422 (42%), Gaps = 103/422 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ TGSGKT ++ALPI+Q L + A V+ PTR+LA+Q
Sbjct: 64 RDVIGLGQTGSGKTGAFALPIIQALLEHR-QPFFACVMSPTRELAIQ------------- 109
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
IAE F A+ +GL + VG ++ + K
Sbjct: 110 --------IAEQ------------------FEALGSGIGLVCSVLVGGVDRMQQVLSIAK 143
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
RP I+V TPGRL+DH+ T+GF+L + YLV+DE D+LL
Sbjct: 144 RPH---------------------IVVGTPGRLLDHLKDTKGFSLTKVKYLVLDEADKLL 182
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
++ L +L K+ P R
Sbjct: 183 NLEFKESLDDIL-------------------------------------KEIPKERRT-Y 204
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
+ SAT+T+ +KL + L +P+ + ++Y + L+ + K YLV +L L
Sbjct: 205 LFSATMTKKVSKLQRACLRNPVKVEV-SSKYSTVDTLKQEWYFVPADYKDCYLVHVLNEL 263
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
++F + EST L L + G K SG Q R L F+ +L+
Sbjct: 264 QGSMIMIFVRTCESTRLLALTLRNLG---FKALSISGQMSQDKRLGALNKFKAKDFNILI 320
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
+D +RG+D++GV+ V+NYD P K Y+HR GRTARAGQ G + +++ E + FK +
Sbjct: 321 CTDVASRGLDIQGVDVVMNYDIPMNSKDYVHRVGRTARAGQSGYAVSFVNQYEAEWFKLI 380
Query: 445 LQ 446
Q
Sbjct: 381 EQ 382
>gi|225681311|gb|EEH19595.1| ATP-dependent RNA helicase DBP6 [Paracoccidioides brasiliensis
Pb03]
Length = 836
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 150/286 (52%), Gaps = 37/286 (12%)
Query: 7 FPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
FP+Q AV + E PG DLCI++ TGSGKTL+YALP+V+ + A+ LR LV
Sbjct: 289 FPIQAAVLELLFKGENRHPG----DLCISAATGSGKTLAYALPMVEGIEQSAIPKLRGLV 344
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
++PTR+L Q A C+ C GL ++ ++ + L I L Q+ F++
Sbjct: 345 IVPTRELVKQARDA-CELCSSGT-GLRIGTAVGTTSLKEEQALLIKLDQLYSPFSSQT-- 400
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYD--PEDVLQELQSAVDILVATPGRLMD 179
LS + A + E I EA + + P V +DIL++TPGRL+D
Sbjct: 401 --LSEQSMSSEDWAAFNLQEYI----AEANVSHKALPNHVTTS-SPCIDILISTPGRLVD 453
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
HI T+GFTLEHL +LVVDE DRLL E++Q W+ VL + + S + FL + G
Sbjct: 454 HIRCTQGFTLEHLEWLVVDEADRLLNESFQEWIKVVLPALEMERIDSNSKSGIFL-NQLG 512
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 285
+ RR +L K++LSAT+T+D KL L L +P
Sbjct: 513 -FQIHRR-------------QLQKIILSATMTRDIPKLISLRLRNP 544
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 330 IVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
+VFT S ES RL LL L +I + + + +TL A+R GK+ +++++D
Sbjct: 683 LVFTKSSESASRLARLLALMHPPLAKRIGTLTKSNKSTTSRRTLSAYRNGKVSIVIATDC 742
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRA-GRTARA--GQLG 427
+RG+D+ + +VVNYD PA + +YIHR GR AR GQ G
Sbjct: 743 ASRGLDLPSLTHVVNYDVPASLTSYIHRVDGRLARGTPGQHG 784
>gi|407035126|gb|EKE37546.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 500
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 213/486 (43%), Gaps = 103/486 (21%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI L+P+Q V Q + D+ + +PTGSGKTL+Y LP+++ L N ++ ++
Sbjct: 84 GIKELYPMQKIVQQFIFST---DTDIAVRAPTGSGKTLAYTLPLLK-LINPLFNHIQVVI 139
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
++PT LAL QV +V +
Sbjct: 140 LIPTLPLAL---------------------------------------QVSNVMKPLLKT 160
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
+ ++ + +G+SSI E S C ++V TP RL++H+
Sbjct: 161 INCNL-VCLGESSIEKETS------------CNS------------HVIVTTPIRLLNHL 195
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
+ + L+ L YL+ DETD+LL +P + L + S P +
Sbjct: 196 SKS-TLDLKWLQYLIYDETDKLLT------IPALFPLLNIIKKQYIS------PQYMVDI 242
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 290
KT + V + + ++ SATL+ P QL ++ PL LT
Sbjct: 243 KTGKSLNVFSSSTN----QFRSLLFSATLSSSPKAFKQLQMNKPLLLTFDDSFVRDINEI 298
Query: 291 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
+T+Y LP +E+ K L ++ LL++ G K I+F +S + L L+
Sbjct: 299 TQTKYVLPSTIENRYTPVLPIEKDLVVLELLKTSG--KSIIFCNSNNTAFVLFRLIQEMA 356
Query: 351 ELRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 406
E K K+ G +Q + K +K I V +++D M+RG+D++G+ V+N+D
Sbjct: 357 EFIGKEKKEIGCIISSMKQKEKLKVIKRVENDSINVFITTDVMSRGIDIKGLKTVINFDC 416
Query: 407 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSLIES 465
P + Y+HRAGRT RAG G C T++ +EV K L+K +N+ + I SLI+S
Sbjct: 417 PVSTQLYVHRAGRTGRAGNEGICHTIVLTNEVGNLKGYLKKMNNELHKVSVIVEESLIKS 476
Query: 466 LRPVYK 471
+ K
Sbjct: 477 YNKITK 482
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 190/432 (43%), Gaps = 103/432 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++I L +D+ + TGSGKT ++ALPI+Q L ++ + ALV+ PTR+LA+Q
Sbjct: 41 IQAQSIPQALQGKDVIGLAQTGSGKTGAFALPILQELLDKP-QAFFALVLSPTRELAIQ- 98
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
IAE F A+ +G+ + VG
Sbjct: 99 --------------------IAEQ------------------FEALGAGIGVKTAVLVGG 120
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L KRP ++V TPGR++DH+ T+GFTL+ L
Sbjct: 121 IDMMAQSIQLGKRPH---------------------VVVGTPGRVVDHLTNTKGFTLKQL 159
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
L +DE DRLL ++ + +L++ D RR
Sbjct: 160 QVLCLDEADRLLNLDFEQEIDQILKVVPRD----------------------RRT----- 192
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT+T KL + L +P+ + +Y + L+ L +K
Sbjct: 193 -----------QLFSATMTSKVAKLQRACLRNPVKVEV-SAKYSTVDSLKQNYLFIPAKH 240
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K Y+ L L +VFT + + T +L + + G I I G Q R L
Sbjct: 241 KDCYVNYLFNELSSSTMMVFTRTCDQTRKLALVARNLGFGAIPI---HGQMSQPKRIGAL 297
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T+
Sbjct: 298 NKFKAGERNILVATDVASRGLDIPAVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAITM 357
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++K+
Sbjct: 358 VTQYDVELYQKI 369
>gi|323303947|gb|EGA57727.1| Drs1p [Saccharomyces cerevisiae FostersB]
Length = 755
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 259 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 314
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 315 RELAIQV---------------------------------------ADVGKQIARFVSGI 335
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 336 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 374
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 375 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 415
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 416 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 450
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 451 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 507
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 508 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 567
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 568 HRVGRTARAGREGRSVTFV 586
>gi|349579719|dbj|GAA24880.1| K7_Drs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 756
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 260 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 315
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 316 RELAIQV---------------------------------------ADVGKQIARFVSGI 336
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 337 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 375
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 376 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 416
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 417 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 451
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 452 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 508
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 509 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 568
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 569 HRVGRTARAGREGRSVTFV 587
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 206/479 (43%), Gaps = 130/479 (27%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-------A 53
+G + P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R A
Sbjct: 211 LGFNKPTPIQAA----TIPVALLGKDIVGNAVTGSGKTAAFIIPMLERLLYRDRGKKAAA 266
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 113
RCL V++PTR+L +Q C + +A H+
Sbjct: 267 TRCL---VLVPTRELGVQ---------CFEVGTKLAAHT--------------------- 293
Query: 114 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 173
+ L VG S+ + + L RP D+++AT
Sbjct: 294 ---------DIRFSLVVGGLSVKTQEATLRTRP---------------------DVVIAT 323
Query: 174 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
PGRL+DH+ + FTL+ L LV+DE DR+L + + L +
Sbjct: 324 PGRLIDHLRNSPAFTLDALDILVLDEADRMLSDGFADELTEI------------------ 365
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
I+ C P R M+ SAT+T ++L ++ L P+ L
Sbjct: 366 ----------IKSC---------PMSRQT-MLFSATMTDSVDELVRMSLDKPVRL----- 400
Query: 294 RYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
+ P+R + L+ E + LV L + + + I+F S + H++ +
Sbjct: 401 -FVDPKRSTASGLVQEFVRVRAGKESERSALLVTLCKRTFKSRAIIFFRSKKLAHQMRIV 459
Query: 346 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 405
F L +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD
Sbjct: 460 ---FRLLDMKADELHGDLSQEQRLKALQQFRDGAVDFLMATDLASRGLDIKGIETVINYD 516
Query: 406 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIHSIPSSLI 463
P+ + Y+HR GRTARAG+ GR TL+ + + K K ++ A DS IP +
Sbjct: 517 MPSQLAQYLHRVGRTARAGKKGRSVTLVGEADRKMLKASIKHAMAEDSVRHRQIPPEAV 575
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 196/446 (43%), Gaps = 111/446 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q +++I L RD+ + TGSGKT S+ALP++Q L + + L AL
Sbjct: 164 MGFKAPTPIQ----RQSIPVALTGRDIIGLAETGSGKTASFALPVLQKLLEKP-QPLFAL 218
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA Q++ + F A+
Sbjct: 219 ILTPTRELAYQIS---------------------------------------EQFEALGS 239
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G+ + VG + + L K+P IL+ATPGR++DH
Sbjct: 240 TIGVKCCVIVGGMDMTTQAIALSKKP---------------------HILIATPGRIVDH 278
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+G+ L +L++DE DR+L ++ + +L+ + +T+L
Sbjct: 279 LENTKGY----LKFLIMDEADRILNMDFEEEVDKILKAIPKER-------NTYL------ 321
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T KL + L +P+ + T+Y+
Sbjct: 322 -------------------------YSATMTSKVAKLQRASLRNPVKIEVA-TKYQTVGT 355
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L L ++ K YL L L I+FT + + R+ +L + G I +
Sbjct: 356 LVQQYLFIPARFKDCYLTYALNQLAGNSTIIFTMTCANAQRVALMLRNLGFPAIPL---H 412
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R L F+E +LV++D +RG+D+ V+ V+NYD P + K YIHR GRT
Sbjct: 413 GQLTQPKRLGALNKFKEQSRSILVATDVASRGLDIPHVDLVINYDIPTHSKDYIHRVGRT 472
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQ 446
ARAG+ GR T++ + +V+ F+++ Q
Sbjct: 473 ARAGRSGRSITMVTQYDVELFQRIEQ 498
>gi|160380652|sp|A7A0P8.1|DRS1_YEAS7 RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|151941161|gb|EDN59539.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406035|gb|EDV09302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207343227|gb|EDZ70754.1| YLL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 754
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 258 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 313
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 314 RELAIQV---------------------------------------ADVGKQIARFVSGI 334
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 335 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 373
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 374 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 414
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 415 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 449
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 450 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 506
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 507 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 566
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 567 HRVGRTARAGREGRSVTFV 585
>gi|6323021|ref|NP_013093.1| Drs1p [Saccharomyces cerevisiae S288c]
gi|1706521|sp|P32892.2|DRS1_YEAST RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|1360171|emb|CAA97452.1| DRS1 [Saccharomyces cerevisiae]
gi|1495215|emb|CAA62783.1| L1345/DRS1 protein [Saccharomyces cerevisiae]
gi|285813414|tpg|DAA09310.1| TPA: Drs1p [Saccharomyces cerevisiae S288c]
Length = 752
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 256 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 311
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 312 RELAIQV---------------------------------------ADVGKQIARFVSGI 332
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 333 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 371
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 372 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 412
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 413 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 447
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 448 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 504
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 505 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 564
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 565 HRVGRTARAGREGRSVTFV 583
>gi|392297967|gb|EIW09066.1| Drs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 748
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 252 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 307
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 308 RELAIQV---------------------------------------ADVGKQIARFVSGI 328
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 329 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 367
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 368 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 408
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 409 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 443
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 444 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 500
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 501 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 560
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 561 HRVGRTARAGREGRSVTFV 579
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 180 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 235
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF +
Sbjct: 236 VLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC------------ 265
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ E++ L+S DI+VATPGR++
Sbjct: 266 -----LIVG---GLSTKVQEVA----------------------LRSMPDIVVATPGRII 295
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L +++DE DRLL + A + +
Sbjct: 296 DHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL----------------------- 332
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 333 -----IRMC---------PKRRQT-MLFSATMTEEIDELIKLSLNKPVRLEADPSLKRPA 377
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + ES + + L L++ + I+F+ + +S HRL + FG +K
Sbjct: 378 TLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGLSGMK 433
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ FR+ ++ L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 434 AAELHGNLTQAQRLEALELFRKQEVDFLIATDVAARGIDIVGVQTVINFACPRDVKTYLH 493
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 494 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 526
>gi|143454043|sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|125579336|gb|EAZ20482.1| hypothetical protein OsJ_36091 [Oryza sativa Japonica Group]
gi|215706455|dbj|BAG93311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 802
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 202/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 212 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 267
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF +
Sbjct: 268 VLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC------------ 297
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ E++ L+S DI+VATPGR++
Sbjct: 298 -----LIVG---GLSTKVQEVA----------------------LRSMPDIVVATPGRII 327
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L L++DE DRLL + A + +
Sbjct: 328 DHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL----------------------- 364
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ N+L L L+ P+ L + +
Sbjct: 365 -----IRMC---------PRRRQT-MLFSATMTEEINELVTLSLNKPVRLEADPSLKRPA 409
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E+ + + L L++ ++K I+F+ + S HRL + FG +K
Sbjct: 410 TLTEEVVRIRRAREANQEAVLLALCLKTF-KDKVIIFSGTKHSAHRLKII---FGLSGMK 465
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +TY+H
Sbjct: 466 AAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLH 525
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 526 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 558
>gi|171656|gb|AAA34666.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
Length = 722
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 187/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 226 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 281
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 282 RELAIQV---------------------------------------ADVGKQIARFVSGI 302
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 303 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 341
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 342 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 382
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 383 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 417
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G +
Sbjct: 418 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG---M 474
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 475 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 534
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 535 HRVGRTARAGREGRSVTFV 553
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 194/431 (45%), Gaps = 104/431 (24%)
Query: 15 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 73
QE P L +D+ + TGSGKT +++LPI+Q L ++ AL++ PTR+LA+Q
Sbjct: 44 QEQAIPHLLAGQDVIGLAQTGSGKTGAFSLPILQALMDKPQEHF-ALILSPTRELAIQ-- 100
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
IAE QV+ A+ +G+ + VG
Sbjct: 101 -------------------IAE--------------QVE----ALGSGIGVKSCVLVGGI 123
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ + L KRP +LV TPGR++DH++ T+GF+L+ L
Sbjct: 124 DMMAQAIALAKRPH---------------------VLVGTPGRVVDHLSNTKGFSLKQLK 162
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
+LV+DE D+LL ++ + +L++
Sbjct: 163 HLVLDEADKLLDMDFEQEIDQILKVI---------------------------------- 188
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
P R ++ SAT+T KL + L P+ + +Y + L + +K K
Sbjct: 189 ---PRERRTQL-FSATMTNKVQKLQRACLDKPVKIEVAH-KYSTVDTLRQQYVFIPAKYK 243
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 373
YL ++ L ++FT + EST R+ LL + G + I G Q R L
Sbjct: 244 DCYLAYVINELSGSTFMIFTRTCESTRRIALLLRNLGFGAVPI---HGHMSQPKRLGALN 300
Query: 374 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
F+ G+ +LV++D +RG+D+ V+ V+N+D P K Y+HR GRTARAG+ GR T++
Sbjct: 301 KFKSGERNILVATDVASRGLDIPSVDVVINFDVPQNSKDYVHRVGRTARAGRSGRSVTIV 360
Query: 434 HKDEVKRFKKL 444
+ +V+ F+K+
Sbjct: 361 TQYDVELFQKI 371
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 202/460 (43%), Gaps = 120/460 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S P+Q + I L +D+ ++ TGSGKT ++ LP+++ L + R +R
Sbjct: 208 LGFSQPTPIQA----KAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIR 263
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++LPTR+LALQ C+++ +A S C
Sbjct: 264 VLILLPTRELALQ---------CQSVMENLAQFSNITSC--------------------- 293
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ A E+ EL+ + D+++ATPGRL+
Sbjct: 294 -----LIVG---GLSNKAQEV----------------------ELRKSPDVVIATPGRLI 323
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ G L+ L L++DE DRLL ++ +
Sbjct: 324 DHLLNAHGIGLDDLEILILDEADRLLDMGFKDEIN------------------------- 358
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
K + C R M+ SATL + LA+L L P+ + + ++
Sbjct: 359 ---KIVESCPTNRQT----------MLFSATLNDEVKTLAKLSLQQPIRVQV-DALMQVT 404
Query: 299 ERLESYKLICESKLKPLYLV---ALLQSL-----GEEKCIVFTSSVESTHRLCTLLNHFG 350
LE + K+KP +L A+L SL + I+F S + HRL + FG
Sbjct: 405 STLEQEFV----KIKPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRII---FG 457
Query: 351 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 410
+K E G Q R +L+ FR+G++ L++SD +RG+D+ GV V+NY+ P +
Sbjct: 458 LSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNM 517
Query: 411 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
YIHR GRTARAG G+ + + ++ K K ++ KA N
Sbjct: 518 ANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIVTKARN 557
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 204/465 (43%), Gaps = 109/465 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++I P L D+ + TGSGKT ++A+PI+ +L + + A ++ PTR+LA
Sbjct: 110 IQSKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNSLWHDQ-QPYYACILAPTRELA--- 165
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 166 ------------------------------------QQIKETFDSLGSLMGVRSVCIVGG 189
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P +++ATPGRLMDH+ T+GF+L L
Sbjct: 190 MNMMDQARDLMRKPH---------------------VIIATPGRLMDHLENTKGFSLRKL 228
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + L +L++ + +T+L
Sbjct: 229 KYLVMDEADRLLDMEFGPVLDRILKILPTQGR------TTYL------------------ 264
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 265 -------------FSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLIVVPGGL 310
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +L+ LL + I+FT + + R+ L N L G Q+ R+ L
Sbjct: 311 KNTFLIYLLNEYIGKSTIIFTRTKANAERISGLCNL---LEFNATALHGDLNQNQRTGAL 367
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +LV++D RG+D+ V+ V+NYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 368 DLFKAGRKTILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISL 427
Query: 433 LHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSGD 474
+ + +++ R +++L K P ++ +I +LR D
Sbjct: 428 VSQYDLELILRIEEVLGK----KLPKETVDKEMILTLRDSVDKAD 468
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V R
Sbjct: 337 VGFSAPTPIQ----RKAIPIGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKVPTSR 392
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 393 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 424
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L +RP D+++ATPGR +
Sbjct: 425 -----------VGGFSLREQENVLKQRP---------------------DVIIATPGRFI 452
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L
Sbjct: 453 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILN--------------------- 491
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
TI P R M+ SAT+T +KL ++ L+ P+ L ++ +
Sbjct: 492 ----TI------------PKSRQT-MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHTVG 534
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YLV L ++ + IVF + HR + FG L +K
Sbjct: 535 TLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARII---FGLLGLKA 591
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P + Y+HR
Sbjct: 592 AELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHR 651
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 652 VGRTARAGRSGRACTI 667
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 180 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 235
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF +
Sbjct: 236 VLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC------------ 265
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ E++ L+S DI+VATPGR++
Sbjct: 266 -----LIVG---GLSTKVQEVA----------------------LRSMPDIVVATPGRII 295
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L +++DE DRLL + A + +
Sbjct: 296 DHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL----------------------- 332
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 333 -----IRMC---------PKRRQT-MLFSATMTEEIDELIKLSLNKPVRLEADPSLKRPA 377
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + ES + + L L++ + I+F+ + +S HRL + FG +K
Sbjct: 378 TLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGLSGMK 433
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ FR+ ++ L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 434 AAELHGNLTQAQRLEALELFRKQEVDFLIATDVAARGIDIVGVQTVINFACPRDVKTYLH 493
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 494 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 526
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 191/439 (43%), Gaps = 113/439 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+++ + E I L +D+ + TGSGKT ++ALPI+ L N C V+
Sbjct: 32 PLKIQI--EAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLQAPRPNHFFAC----VL 85
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
PTR+LA+Q++ + F A+ +
Sbjct: 86 SPTRELAIQIS---------------------------------------EQFEALGSGI 106
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
G+ + VG + + ++ K P I+V TPGR++DH+
Sbjct: 107 GVKSAVLVGGIDMVQQSIKIAKHPH---------------------IIVGTPGRVLDHLK 145
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T+GF+L L YLV+DE DRLL E ++ L +L + + TFL
Sbjct: 146 NTKGFSLSKLKYLVLDEADRLLNEDFEESLNEILGMIPRERR-------TFL-------- 190
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 302
SAT+T+ KL ++ L +P+ + T+Y + L+
Sbjct: 191 -----------------------FSATMTKKVEKLQRVCLRNPVKIEA-STKYSTVDTLK 226
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+K K YLV +L + +VFT + ++T L +L + G I I +G
Sbjct: 227 QQYRFLPAKRKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPI---NGH 283
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTAR
Sbjct: 284 MSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTAR 343
Query: 423 AGQLGRCFTLLHKDEVKRF 441
AG+ G +L+++ E++ +
Sbjct: 344 AGRSGVAISLVNQYELEWY 362
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 184/428 (42%), Gaps = 113/428 (26%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 73
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
IAE F A+ + L + VG
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLVGGI 127
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
YLV+DE DRLL E ++ L +L+
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILE------------------------------------ 190
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
+ P R + SAT+T+ KL + L +P+ + ++Y + L+ +K K
Sbjct: 191 -EIPLERKT-FLFSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKYK 247
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 373
YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGALN 304
Query: 374 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L+
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
Query: 434 HKDEVKRF 441
++ E++ +
Sbjct: 365 NQYELEWY 372
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 180/429 (41%), Gaps = 106/429 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ F A+ ++ L
Sbjct: 189 ELAAQIGQ---------------------------------------TFEALGASISLRC 209
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 210 AVVVGGLDMVSQSIALGKKPH---------------------IVVATPGRLLDHLEKTKG 248
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 249 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 286
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 287 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 330
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 364
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 331 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL-----HGQLS 385
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 386 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 445
Query: 425 QLGRCFTLL 433
+ GR +++
Sbjct: 446 RSGRAISII 454
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 189/431 (43%), Gaps = 107/431 (24%)
Query: 15 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 73
QE P L + +D+ + TGSGKT +++LPI+Q L R AL++ PTR+LA+Q
Sbjct: 26 QEQAIPHLLQGQDVIGLAQTGSGKTGAFSLPILQALMERPQEHF-ALILSPTRELAIQ-- 82
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
IAE QV+ A+ +G+ + VG
Sbjct: 83 -------------------IAE--------------QVE----ALGSGIGVKCAVLVGGI 105
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ + L KRP ILV TPGR++DH++ T+GF L+ L
Sbjct: 106 DMMAQAIALAKRPH---------------------ILVGTPGRVVDHLSNTKGFNLKQLK 144
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
+LV+DE D+LL ++ + +L++ D +
Sbjct: 145 HLVLDEADKLLDMDFEQEIDQILKVIPRDRRTQL-------------------------- 178
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
SAT+T KL + L P+ + +Y E L + +K K
Sbjct: 179 ------------FSATMTNKVQKLQRACLVRPVKVEVA-AKYSTVETLRQQYVFIPAKYK 225
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 373
YL +L L ++FT + EST R+ +L + G + I G Q R L
Sbjct: 226 DCYLAYVLNELSGSTFMIFTRTCESTRRIALMLRNLGFGAVPI---HGHMSQPKRLGALN 282
Query: 374 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
F+ G+ +L ++D +RG+D+ V+ V+NYD K YIHR GRTARAG+ GR T++
Sbjct: 283 KFKAGERSILAATDVASRGLDIPSVDVVINYDNS---KDYIHRVGRTARAGRSGRSVTIV 339
Query: 434 HKDEVKRFKKL 444
+ +V+ F+K+
Sbjct: 340 TQYDVELFQKI 350
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 189/434 (43%), Gaps = 114/434 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+ I++ PVQV + D+ + TG+GKTL++ LPI+ L+ + AL
Sbjct: 62 LAINTPTPVQVNCIPHILAGS----DVLGCAKTGTGKTLAFGLPILHELALDPY-GICAL 116
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ PTR+LA+Q+ D FAA+
Sbjct: 117 ILTPTRELAMQIG---------------------------------------DQFAALGT 137
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++GL +G+ VG + S+L +RP I+VATPGRL DH
Sbjct: 138 SIGLKIGIIVGGKDRVAQSSDLARRPH---------------------IIVATPGRLADH 176
Query: 181 INA---TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+ + G E L +LV+DE DRLL Y L T+L TFLP
Sbjct: 177 LESDSENTGKLFEKLRFLVLDEADRLLDGQYSVELKTIL---------------TFLPKQ 221
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
+L + SAT+T ++L Q+ + P F ++
Sbjct: 222 RQTL-----------------------LFSATITSALSQLHQVSVKKPYFF-EDKSEIAT 257
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNHFGELR 353
++LE ++C +K YLV ++++ E+ ++F+ + L + + G
Sbjct: 258 VDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLILIFSHTCRECQALAIMFHGLG--- 314
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
K+ Q R+ +L FR G+I++L+ +D +RG+D+ V+ VVN++ P KTY
Sbjct: 315 FKVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVVNHNVPQNPKTY 374
Query: 414 IHRAGRTARAGQLG 427
IHR GR+ARAG+ G
Sbjct: 375 IHRVGRSARAGRFG 388
>gi|348667582|gb|EGZ07407.1| hypothetical protein PHYSODRAFT_527947 [Phytophthora sojae]
Length = 773
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 187/436 (42%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAVRCLR 58
+G P+Q Q I L +D+C ++ TGSGKT ++ LPI++ L +R V+ R
Sbjct: 167 IGFEKPTPIQ----QRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTR 222
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ P R+LA Q S +F +
Sbjct: 223 TMIICPVRELATQCQS---------------------------------------MFEQL 243
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A ++ LAVG + + +EL RP D++V TPGR++
Sbjct: 244 ARFTDITCSLAVGGLPLKAQEAELRNRP---------------------DVVVCTPGRMI 282
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ ++ ++ L LV+DE DRLL + VL+L
Sbjct: 283 DHLRNSKSVHMDDLEILVLDEADRLLELGF---TEEVLEL-------------------- 319
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+R C V+R M+ SAT+T ++L L + P+ ++T
Sbjct: 320 -----VRMCPVQRQ----------TMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAK 364
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + I ++ + L+AL IVF + HR+ + FG IK
Sbjct: 365 HLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMII---FGLAGIKA 421
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + L+ FR+G + +L+ +D RG+DV GV+ V+NY+ P I TY+HR
Sbjct: 422 AELHGNLMQRERLEALQKFRDGTVDILLCTDIAARGIDVRGVHAVINYEMPKDITTYVHR 481
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR TL
Sbjct: 482 VGRTARAGRNGRAVTL 497
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 187/437 (42%), Gaps = 104/437 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPTRDLAL 70
+ +ETI L RDL + TGSGKT ++A+PI+Q L + A + A V+ PTR
Sbjct: 55 IQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKLTWACVLAPTR---- 110
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
E+CVQ + F + ++ L+ V
Sbjct: 111 ------------------------ELCVQ-----------IGQQFEGLGASINLTTATIV 135
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G + + L K+P I+VA+PGRL+DH+ T+GF L+
Sbjct: 136 GGLDMVTQAMSLSKKPH---------------------IIVASPGRLVDHLENTKGFHLK 174
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ +LV+DE DRLL ++ L ++Q D + TFL
Sbjct: 175 TIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ-------TFL---------------- 211
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T ++L + L P+ ++ + + L +
Sbjct: 212 ---------------FSATMTNKVSQLQRASLTRPVKCEVAR-KFDVAKGLVQNYMFVPH 255
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K K YL ALL ++F + + R+ T L H G + + G Q+ R
Sbjct: 256 KHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCL---HGKMTQTHRLG 312
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L FR G VLV++D RG+D+ V+ V+N+D P + YIHR GRTARAG+ GR
Sbjct: 313 ALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTARAGRTGRSV 372
Query: 431 TLLHKDEVKRFKKLLQK 447
TL+ + +++ F+++ K
Sbjct: 373 TLVTQYDIEPFQRIENK 389
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 191/434 (44%), Gaps = 116/434 (26%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPTRDLALQVNSARCKYCCK 82
+D+ ++ TGSGKT ++ LPI++ L R R R L+VLPTR+LALQ C
Sbjct: 272 KDILASATTGSGKTAAFILPILERLLYRDATHRVSRVLIVLPTRELALQ---------CH 322
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
++F +A + + C L VG S + EL
Sbjct: 323 SVFESLAQFTNVQSC------------------------------LVVGGLSNKVQEHEL 352
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
KRP D+++ATPGRL+DH+ LE + LV+DE DR
Sbjct: 353 RKRP---------------------DVIIATPGRLIDHLLNAHDVGLEDIEILVLDEADR 391
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
LL ++ L V++ C P R
Sbjct: 392 LLDMGFKDELNRVVE----------------------------SC---------PDGRQT 414
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYL---VA 319
++ SATL+ D LA+L L P+ + + +++ LE + K+KP L A
Sbjct: 415 -LLFSATLSDDVKLLAKLSLSQPVRVAV-DALFQVASTLEQEFI----KIKPGQLADRTA 468
Query: 320 LLQSL-----GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
+L SL CIVF S + HR+ LL G +K+ E G Q R + L++
Sbjct: 469 MLLSLCTRVFNGGGCIVFFRSKKEVHRIAILLGLSG---LKVGELHGDLNQEQRFEALQS 525
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
FR G++ L+++D RG+DV GV V+NY+ P + YIHR GRTARAG GR + +
Sbjct: 526 FRNGEVDFLLATDIAARGLDVLGVRTVINYNMPRSLAQYIHRVGRTARAGLAGRSCSFIT 585
Query: 435 KDEVKRFKKLLQKA 448
+ + K K ++ +A
Sbjct: 586 EADRKILKDIVSRA 599
>gi|67471357|ref|XP_651630.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56468397|gb|EAL46244.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702889|gb|EMD43437.1| ATP-dependent RNA helicase DBP6, putative [Entamoeba histolytica
KU27]
Length = 500
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 213/486 (43%), Gaps = 103/486 (21%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI L+P+Q V Q + D+ + +PTGSGKTL+Y LP+++ L N ++ ++
Sbjct: 84 GIKELYPMQKIVQQFIFST---DTDIAVRAPTGSGKTLAYTLPLLK-LINPLFNHIQVVI 139
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
++PT LAL QV +V +
Sbjct: 140 LIPTLPLAL---------------------------------------QVSNVMKPLLKT 160
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
+ ++ + +G+SSI E S C ++V TP RL++H+
Sbjct: 161 INCNL-VCLGESSIEKETS------------CNS------------HVIVTTPIRLLNHL 195
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
+ + L+ L YL+ DETD+LL +P + L + S P +
Sbjct: 196 SKS-TLDLKWLQYLIYDETDKLLT------IPALFPLLNIIKKQYIS------PQYMVDI 242
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 290
KT + V + + ++ SATL+ P QL ++ PL LT
Sbjct: 243 KTGKSLNVFSSSTN----QFRSLLFSATLSSSPKAFKQLQMNKPLLLTFDDSFVRDINEI 298
Query: 291 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
+T+Y LP +E+ K L ++ LL++ G K I+F +S + L L+
Sbjct: 299 TQTKYVLPSTIENRYTPVLPIEKDLVVLELLKTSG--KSIIFCNSNNTAFVLFRLIQEMA 356
Query: 351 ELRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 406
E K K+ G +Q + K +K I V +++D M+RG+D++G+ V+N+D
Sbjct: 357 EFIGKDKKEIGCIISSMKQKEKLKVIKRVENDSINVFITTDLMSRGIDIKGLKTVINFDC 416
Query: 407 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSLIES 465
P + Y+HRAGRT RAG G C T++ +EV K L+K +N+ + I SLI+S
Sbjct: 417 PVSTQLYVHRAGRTGRAGNEGICHTIVLTNEVGNLKSYLKKMNNELHKVSVIVEESLIKS 476
Query: 466 LRPVYK 471
+ K
Sbjct: 477 YNKITK 482
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 195/448 (43%), Gaps = 114/448 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L + V R
Sbjct: 232 LGFTKPSPIQSA----TIPIALLGKDIVAGAVTGSGKTAAFMIPIIERLLYKPAKVASTR 287
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q++ DV I
Sbjct: 288 VVILTPTRELAIQIS---------------------------------------DVAKKI 308
Query: 119 APAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
V GL+ GLAVG ++ + L RP DI++ATPGR
Sbjct: 309 GHFVNGLTFGLAVGGLNLRQQEQILKSRP---------------------DIVIATPGRF 347
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ + F+++ + LV+DE DR+L E +Q L ++ T LP+
Sbjct: 348 IDHVRNSASFSVDRVEILVLDEADRMLEEGFQDELSEIM---------------TLLPT- 391
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
R ++ SAT+ +L L L P+ + + +
Sbjct: 392 ----------------------RRQNLLFSATMNSKIKQLVSLSLKKPVRIMIDPPK-QA 428
Query: 298 PERL--ESYKLICESKLKP--LY-LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
+RL E ++ LKP LY L+ L S G+++ +VF S E HRL +L G
Sbjct: 429 ADRLVQEFVRIRKRDHLKPALLYNLIRKLDSTGQKRIVVFVSRKEVAHRLRIILGLLG-- 486
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
+ + E G Q R ++ F+ + VL+ +D +RG+D+ + V+NYD P +
Sbjct: 487 -MGVAELHGSLSQEQRLDSVNKFKSLDVPVLICTDLASRGLDIPKIEIVINYDMPKSYEI 545
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKR 440
Y+HR GRTARAG+ GR T + + +R
Sbjct: 546 YLHRVGRTARAGREGRSVTFVGESSQER 573
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V R
Sbjct: 337 VGFSAPTPIQ----RKAIPIGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKVPTSR 392
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 393 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 424
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L +RP D+++ATPGR +
Sbjct: 425 -----------VGGFSLREQENVLKQRP---------------------DVIIATPGRFI 452
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L
Sbjct: 453 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILN--------------------- 491
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
TI P R M+ SAT+T +KL ++ L+ P+ L ++ +
Sbjct: 492 ----TI------------PKSRQT-MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHTVG 534
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YLV L ++ + IVF + HR + FG L +K
Sbjct: 535 TLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARII---FGLLGLKA 591
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P + Y+HR
Sbjct: 592 AELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHR 651
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 652 VGRTARAGRSGRACTI 667
>gi|256272311|gb|EEU07295.1| Drs1p [Saccharomyces cerevisiae JAY291]
Length = 751
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 124/439 (28%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 255 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 310
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GL 124
R+LA+QV DV IA V G+
Sbjct: 311 RELAIQV---------------------------------------ADVGKQIARFVSGI 331
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 332 TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNS 370
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 371 ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN------------------- 411
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
++ SAT+ L L L P+ + P + +
Sbjct: 412 -------------------LLFSATMNSKIKSLVSLSLKKPVRIMID------PPKKAAT 446
Query: 305 KLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
KL E LKP L L++ L G+++ +VF + E+ HRL ++ G L +
Sbjct: 447 KLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGM 503
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 504 SVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYL 563
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 564 HRVGRTARAGREGRSVTFV 582
>gi|405120234|gb|AFR95005.1| ATP-dependent RNA helicase DRS1 [Cryptococcus neoformans var.
grubii H99]
Length = 813
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 199/480 (41%), Gaps = 116/480 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-----AVRCLRALV 61
F + I L RD+ ++ TGSGKT ++ +PI++ L R C R LV
Sbjct: 224 FTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAAC-RVLV 282
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
+ PTR+LA+Q C+ K A+A
Sbjct: 283 LCPTRELAVQ-----CEAVGK----------------------------------ALAEK 303
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
GL V A+ L G+ + + L++ DIL+ATPGRL+DH+
Sbjct: 304 GGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIATPGRLIDHL 344
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
T FTL L LV+DE DR+L + L +
Sbjct: 345 TNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI-------------------------- 378
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 301
I+ C P R M+ SAT+T ++L +L L P+ + R
Sbjct: 379 --IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTAKGLT 426
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG----ELRIKIK 357
+ + I + L+AL + EKCI+F S H++ + FG EL +
Sbjct: 427 QEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLT 486
Query: 358 EYSG----------LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 407
+ G + S R + L F+ G + L+++D +RG+D++GV V+NYD P
Sbjct: 487 QEQGSLPSKYRIGVMLTSSQRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMP 546
Query: 408 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
+ Y HR GRTARAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 547 GQLAQYTHRVGRTARAGRKGRSISLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAVK 606
>gi|270010045|gb|EFA06493.1| hypothetical protein TcasGA2_TC009390 [Tribolium castaneum]
Length = 691
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 209/468 (44%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q + TI L RD+C + TG+GKT +Y LP ++ L R V R LV++P
Sbjct: 162 PIQAS----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPVGGPPVTRVLVLVP 217
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF +
Sbjct: 218 TRELGVQV------------------YQVTKQLAQFSDI--------------------- 238
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+GLAVG + + + L K P DI++ATPGRL+DH+ +T
Sbjct: 239 QIGLAVGGLDLKAQETILRKNP---------------------DIVIATPGRLIDHLKST 277
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F L+ + L++DE DR+L E + + + I
Sbjct: 278 PTFGLDSIEVLILDEADRMLDEYFAEQMKEI----------------------------I 309
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
++C R M+ SAT+T++ LA + L+ P+ L + E + L +
Sbjct: 310 KQCARTRQT----------MLFSATMTEEVESLAAVSLNKPVRLFVDSNREVAFGLRQEF 359
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E + + L AL+ E C+VF + + HRL LL L +K+ E G
Sbjct: 360 VRIRQDKEGDREAI-LAALVCRTFREHCMVFVQTKKQAHRLHILLGL---LGLKVGELHG 415
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R L+ F+E +I VLV++D RG+D++GV V+N+ PA ++ YIHR GRTA
Sbjct: 416 NLTQPQRLDALQKFKETQIDVLVATDVAARGLDIQGVQTVINFVMPATVEHYIHRVGRTA 475
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
RAG+ G +L + E K K +++KA + P+ S IP ++E +
Sbjct: 476 RAGRAGVSVSLAGEQERKIVKDVVKKAKH---PVKSRVIPPDILEKYK 520
>gi|115488568|ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
gi|113649278|dbj|BAF29790.1| Os12g0481100, partial [Oryza sativa Japonica Group]
Length = 832
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 202/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 242 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 297
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF +
Sbjct: 298 VLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC------------ 327
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ E++ L+S DI+VATPGR++
Sbjct: 328 -----LIVG---GLSTKVQEVA----------------------LRSMPDIVVATPGRII 357
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L L++DE DRLL + A + +
Sbjct: 358 DHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL----------------------- 394
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ N+L L L+ P+ L + +
Sbjct: 395 -----IRMC---------PRRRQT-MLFSATMTEEINELVTLSLNKPVRLEADPSLKRPA 439
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E+ + + L L++ ++K I+F+ + S HRL + FG +K
Sbjct: 440 TLTEEVVRIRRAREANQEAVLLALCLKTF-KDKVIIFSGTKHSAHRLKII---FGLSGMK 495
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +TY+H
Sbjct: 496 AAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLH 555
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 556 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 588
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 206/455 (45%), Gaps = 119/455 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 311 VGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTAAFIVPILERLLYRPRKVPTSR 366
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 367 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 398
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 399 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 426
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L L++DE DR+L + + L +L T +P +
Sbjct: 427 DHMRNSASFTVDTLEILILDEADRMLEDGFAEELNEIL---------------TTIPKSR 471
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 472 QT-----------------------MLFSATMTSSVDKLIRVGLNKPIRLMVDSKKQTVG 508
Query: 299 ERLESYKLICESKLKP-------LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
++ + +L+P YL+ L +++ + IVF + HR+ + FG
Sbjct: 509 TLVQEF-----VRLRPGREDKRLAYLMFLCKTVYTSRVIVFFRQKKEAHRVRIV---FGL 560
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+ +K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 561 MGLKAAELHGSMSQEQRIKSVEDFRDGKVSYLLATDLASRGLDIKGVETVINYEAPQSHE 620
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 621 IYLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 655
>gi|158287566|ref|XP_309566.4| AGAP011084-PA [Anopheles gambiae str. PEST]
gi|157019713|gb|EAA05253.5| AGAP011084-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 207/466 (44%), Gaps = 113/466 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P+Q + TI L RD+C + TG+GKT +Y LP ++ L N A R LV++P
Sbjct: 199 PIQAS----TIPIALMGRDICGCAATGTGKTAAYMLPTIERLLYKPNVAQAVTRVLVLVP 254
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L QV + +A+ QF +
Sbjct: 255 TRELGAQV------------------YQVAKQLTQF---------------------TNV 275
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VG+A+G + + + L K P D+++ATPGRL+DHI T
Sbjct: 276 DVGIAIGGLDVKAQEAVLRKNP---------------------DVVIATPGRLIDHIKNT 314
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + + I
Sbjct: 315 PSFSLDSIEILILDEADRMLDEYFAEQMKEI----------------------------I 346
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGET-RYKLPERL 301
R C R M+ SAT+T++ LA + L P +F+ +T + L +
Sbjct: 347 RSCSATRQT----------MLFSATMTEEVKDLAAVSLKKPVKIFVNNNQTVAFNLRQEF 396
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E+ + + L AL+ + C+VF + + HRL LL L +K E G
Sbjct: 397 IRIREGREADREAI-LAALVCRTFHDHCMVFVQTKRTAHRLRILLGL---LGVKTGELHG 452
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q+ R ++LK F++ ++ +L+++D RG+D+ V V+N+ PA ++ YIHR GRTA
Sbjct: 453 DLTQAQRLESLKEFKDEQVDILIATDVAARGLDISTVKTVINFVMPATLEHYIHRVGRTA 512
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
RAG+ G +L + E K K++++ A + S IP +IE R
Sbjct: 513 RAGKAGVSVSLAGEQERKIVKEIVKNAVS-SVKNRIIPLDIIEKYR 557
>gi|340505836|gb|EGR32122.1| hypothetical protein IMG5_095370 [Ichthyophthirius multifiliis]
Length = 540
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 195/432 (45%), Gaps = 87/432 (20%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ Q+++ L ++D+ + TGSGKTLS+ALPI+Q N+ AL++ PTR
Sbjct: 149 IQQKSLPHTLKKKDIIALAETGSGKTLSFALPILQQFLNQPHEYY-ALILSPTR------ 201
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
E+CVQ + + F + GL V + VG
Sbjct: 202 ----------------------ELCVQ-----------ISESFENLGKEFGLKVVVIVGG 228
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ L K P + ++ ++V TPGR+ H T+GF + +L
Sbjct: 229 LDPIKQMIALSKNPHISIYYN-----IIYIYIYLYILVVGTPGRIQYHFQNTKGFQMNNL 283
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE D+LL ++A + +L + + +TFL
Sbjct: 284 KFLVLDEADKLLNMDFEAEINDIL-------DKIPKERNTFL------------------ 318
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T +KL ++ L +P+ + T+Y+ + L K
Sbjct: 319 -------------FSATMTNKVHKLQKVSLRNPVKIEVS-TKYQTVQTLIQQYCFIPIKY 364
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL +L CI+F ++ ++ RL +L + G + I G Q+ R +
Sbjct: 365 KDSYLAFILNENQGSSCIIFVTTCINSIRLTLMLRNLGFQAVSI---HGQMNQTKRQTAI 421
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F++G+ ++LV++D +RG+D+ ++ V+NY+ PA K YIHR GRTARAG+ G +L
Sbjct: 422 NKFKDGQKKILVATDVASRGLDIPCIDLVINYELPANTKEYIHRVGRTARAGRKGNAISL 481
Query: 433 LHKDEVKRFKKL 444
+ + +++ F K+
Sbjct: 482 ISQYDLEAFLKI 493
>gi|310791457|gb|EFQ26984.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 772
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 203/462 (43%), Gaps = 110/462 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G S P+Q +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 265 VGFSKPTPIQA----KTIPIALMGKDVVGGAVTGSGKTGAFVVPILERLLYRPKKVPTSR 320
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C H++A + + F
Sbjct: 321 VVILTPTRELAIQ---------C---------HAVATKLAAYTDIKFT------------ 350
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 351 ---------LAVGGLSLKAQEVELRLRP---------------------DVIIATPGRFI 380
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP +
Sbjct: 381 DHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 425
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL +L ++ P + + K
Sbjct: 426 QT-----------------------MLFSATMTSSVDKLVRLGMNKPARVMVDSQKNKTV 462
Query: 299 ERL--ESYKLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E +L + K + YLV + +++ E+ IVF + HR + FG L +
Sbjct: 463 GTLVQEFVRLRPGREEKRMGYLVHICKTMHTERVIVFFRQKKEAHRARII---FGLLGMS 519
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P I+ Y+H
Sbjct: 520 CAELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQNIEIYVH 579
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
R GRTARAG+ G TL + + K K ++ I S
Sbjct: 580 RVGRTARAGRTGIAITLAAEPDRKVVKAAVKAGKAQGAKIMS 621
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 187/437 (42%), Gaps = 104/437 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPTRDLAL 70
+ +ETI L RDL + TGSGKT ++A+PI+Q L + A + A V+ PTR
Sbjct: 55 IQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKSTWACVLAPTR---- 110
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
E+CVQ + F + ++ L+ V
Sbjct: 111 ------------------------ELCVQ-----------IGQQFEGLGASINLTTATIV 135
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G + + L K+P I+VA+PGRL+DH+ T+GF L+
Sbjct: 136 GGLDMVTQAMALSKKPH---------------------IIVASPGRLVDHLENTKGFHLK 174
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ +LV+DE DRLL ++ L ++Q D + TFL
Sbjct: 175 TIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ-------TFL---------------- 211
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
SAT+T ++L + L P+ ++ + + L +
Sbjct: 212 ---------------FSATMTNKVSQLQRASLTRPVKCEVAR-KFDVAKGLVQNYMFVPH 255
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K K YL ALL ++F + + R+ T L H G + + G Q+ R
Sbjct: 256 KHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCL---HGKMTQTHRLG 312
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
L FR G VLV++D RG+D+ V+ V+N+D P + YIHR GRTARAG+ GR
Sbjct: 313 ALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTARAGRTGRSV 372
Query: 431 TLLHKDEVKRFKKLLQK 447
TL+ + +++ F+++ K
Sbjct: 373 TLVTQYDIEPFQRIENK 389
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 188/438 (42%), Gaps = 105/438 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I P L D+ + TGSGKT ++A+PI+ L + A ++ PTR+LA
Sbjct: 149 IQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ-EPYYACILAPTRELA--- 204
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+K+ F ++ +G+ VG
Sbjct: 205 ------------------------------------QQIKETFDSLGSLMGVRSTCIVGG 228
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
++ D+ +L+++P I++ATPGRLMDH+ T+GF+L L
Sbjct: 229 MNMMDQARDLMRKPH---------------------IIIATPGRLMDHLENTKGFSLRKL 267
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
+LV+DE DRLL + L +L++
Sbjct: 268 KFLVMDEADRLLDMEFGPVLDRILKII--------------------------------- 294
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
P + SAT+T +KL + L +P+ +Y+ + L ++ L
Sbjct: 295 ----PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGL 349
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL+ LL + I+FT + + RL L N L G Q+ R L
Sbjct: 350 KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGAL 406
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ GK +LV++D RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L
Sbjct: 407 DLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISL 466
Query: 433 LHKDEVK---RFKKLLQK 447
+ + +++ R +++L K
Sbjct: 467 VSQYDLELILRIEEVLGK 484
>gi|357152629|ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
[Brachypodium distachyon]
Length = 770
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 183 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 238
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF
Sbjct: 239 VLILTPTRELAAQV------------------HSMIEKLAQF------------------ 262
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ L VG G+ ++V L+S DI+VATPGR++
Sbjct: 263 ---TDIRCCLIVG-------------------GLPTKVQEVA--LRSNPDIVVATPGRII 298
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L L++DE DRLL + + NE
Sbjct: 299 DHLRNSLSVGLEDLAILILDEADRLLELGFSVEI----------NE-------------- 334
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 335 ----LIRMCPKRRQT----------MLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPA 380
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E+ + + L L++ +E+ I+F+ + S HRL + FG +K
Sbjct: 381 TLTEEVVRIRRSREANQEAVLLALCLKTF-KERVIIFSGTKHSAHRLKIM---FGLSGMK 436
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ +L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 437 AAELHGNLTQAQRLEALELFKKQEVDILIATDIAARGIDIVGVRTVINFACPRDVKTYLH 496
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 497 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 529
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 188/431 (43%), Gaps = 103/431 (23%)
Query: 15 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 73
Q ++ P FE RD+ + TGSGKT ++ LPI+Q L + V+ AL++ PTR+LA Q
Sbjct: 66 QASVLPEAFEGRDIIGLAETGSGKTGAFCLPILQGLLRKPVKGTAALILTPTRELAFQ-- 123
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
+ V + A+G + VG
Sbjct: 124 -------------------------------------ILQVVQGLGQAMGATAVCVVGGV 146
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ L + P +++ATPGRL+DH+ T+GF L +
Sbjct: 147 DRTSQAIALGRNPH---------------------VVIATPGRLLDHLKDTKGFNLNKVR 185
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
YLV+DE DR+L ++ L +L DN +P +L
Sbjct: 186 YLVLDEADRMLSMDFEEELHQIL-----DN----------MPEQRQTL------------ 218
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
+ SAT+T KL + L P+ + T+++ P++L L +K K
Sbjct: 219 -----------LFSATMTTQVAKLERASLKDPVKVQVS-TKFQTPKQLLQSYLFIPAKYK 266
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 373
YL L+ + +VF ++ + RL +L + G + + G QS R L+
Sbjct: 267 DCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAVCL---HGQMDQSKRLGALQ 323
Query: 374 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
F G +L+ +D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR ++
Sbjct: 324 KFSSGDRTILLCTDVASRGLDLPQVDLVINFDLPGHGKEYIHRVGRTARAGKSGRAIAMV 383
Query: 434 HKDEVKRFKKL 444
+ +V+ +++L
Sbjct: 384 TQYDVEVYQRL 394
>gi|198423018|ref|XP_002125988.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
[Ciona intestinalis]
Length = 718
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 202/461 (43%), Gaps = 110/461 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLAL 70
+ Q I GL RD+C + TG+GKT ++ LP+++ L R + R L ++PTR+LA+
Sbjct: 197 IQQAAIPIGLLGRDICACAATGTGKTAAFMLPVLERLLYRTQSTPITRVLCLVPTRELAV 256
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
QV S + +A HS +C LA
Sbjct: 257 QVYS---------VTHHLAQHSNLRIC------------------------------LAA 277
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G + + EA + P DI++ATPGRL+DH++ T F L+
Sbjct: 278 GGLDMKSQ----------EAALRQGP-----------DIVIATPGRLIDHLHNTPSFDLQ 316
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
+ L++DE DR+L E ++ + +++L C
Sbjct: 317 MVEILILDEADRMLDEFFEDQMNEIIKL----------------------------CSHH 348
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
R M+ SAT+++ +LA + L +P+ + P + + I E+
Sbjct: 349 RQ----------TMLFSATMSEQVQELAAVSLKNPVKIFVNSNTDVAPFLRQEFIRIRET 398
Query: 311 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 368
+ + + AL +VFT + + HR+ +L G L +K E G Q R
Sbjct: 399 REGDREAIVAALCSRSFISNVLVFTQTKKQAHRMHIVL---GLLGLKAGELHGNLSQGQR 455
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
++LK F+ G I +LV +D RG+D+E V V+N P + Y+HR GRTARAG+ GR
Sbjct: 456 LESLKRFKNGDIDILVCTDLAARGLDIENVKTVINLTMPNTQQHYVHRVGRTARAGKSGR 515
Query: 429 CFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
+L+ + E K K++++ A N P+ S +P +I R
Sbjct: 516 SVSLVGETERKLLKEIVKFAKN---PVKSRVVPPDVISKFR 553
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 183/429 (42%), Gaps = 115/429 (26%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 73
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
IAE F A+ + L + G
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLFGGI 127
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
YLV+DE DRLL E ++ L +L+
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILE------------------------------------ 190
Query: 254 KDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
PR K L SAT+T+ KL + L +P+ + ++Y + L+ +K
Sbjct: 191 ---EIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKY 246
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGAL 303
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L
Sbjct: 304 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISL 363
Query: 433 LHKDEVKRF 441
+++ E++ +
Sbjct: 364 VNQYELEWY 372
>gi|301110278|ref|XP_002904219.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262096345|gb|EEY54397.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 758
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 187/436 (42%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAVRCLR 58
+G P+Q Q I L +D+C ++ TGSGKT ++ LPI++ L +R V+ R
Sbjct: 149 IGFEKPTPIQ----QRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTR 204
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ P R+LA Q S + +
Sbjct: 205 VMIICPVRELATQCQS---------------------------------------MLEQL 225
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A ++ LAVG + + +EL RP D++V TPGR++
Sbjct: 226 ARFTDITCSLAVGGLPLKAQEAELRNRP---------------------DVVVCTPGRMI 264
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ ++ ++ L LV+DE DRLL + VL+L
Sbjct: 265 DHLRNSKSVHMDDLEILVLDEADRLLELGF---TEEVLEL-------------------- 301
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+R C V+R M+ SAT+T ++L L + P+ ++T
Sbjct: 302 -----VRMCPVQRQ----------TMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAK 346
Query: 299 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + I ++ + L+AL IVF + HR+ + FG IK
Sbjct: 347 HLVQEFVRIRPNREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMII---FGLAGIKA 403
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G +Q R + L+ FR+G + VL+ +D RG+DV GV+ V+NY+ P I TY+HR
Sbjct: 404 AELHGNLQQRERLEALQKFRDGTVDVLLCTDIAARGIDVRGVHAVINYEMPKDITTYVHR 463
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR TL
Sbjct: 464 VGRTARAGRNGRAVTL 479
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 188/433 (43%), Gaps = 103/433 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
A+ Q++I L RD+ + TGSGKT ++ALPI+Q+L + R +L++ PTR+LA+Q
Sbjct: 44 AIQQKSIPEALQGRDVIGLAQTGSGKTGAFALPILQSLLDEP-RTYHSLILSPTRELAIQ 102
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
IAE QV+ A+ +G+ VG
Sbjct: 103 ---------------------IAE--------------QVE----ALGRGIGVRTATLVG 123
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
+ + L KRP ++V TPGR++DH+ T+GF L+
Sbjct: 124 GIEMTSQAIMLGKRPH---------------------VVVGTPGRVVDHLENTKGFGLKA 162
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L LV+DE DRLL ++ + +L++ D +
Sbjct: 163 LKVLVLDEADRLLNLDFEEEIDKILRVIPQDRRTQL------------------------ 198
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
SAT+T KL + L P+ + +Y + L + L +K
Sbjct: 199 --------------FSATMTSKVQKLQRACLRDPVKVEV-SAKYSTVDSLRQHYLFIPAK 243
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K Y L L IVF + + T +L + + G + I G Q R
Sbjct: 244 HKDCYATYLFNELSASTLIVFARTCDQTRKLALIARNLGFGAVPIH---GQMSQPKRIAA 300
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L+ F+ G+ +L+++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T
Sbjct: 301 LQKFKAGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAVT 360
Query: 432 LLHKDEVKRFKKL 444
++ + +V+ ++K+
Sbjct: 361 MVTQYDVELYQKI 373
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 200/455 (43%), Gaps = 105/455 (23%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCK 82
+D+ + TGSGKT ++ +PI++ L R V R + +PTR+LA+Q C
Sbjct: 313 KDVVGGAETGSGKTAAFLIPILERLLYRPKKVPTTRVAIFMPTRELAVQ---------CF 363
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
N+ A F + F L G S D+ + L
Sbjct: 364 NV---------ATKLASFTDITF---------------------ALMAGGFSTRDQEAVL 393
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
RP D+++ATPGR +DH++ T F +EHL LV+DE DR
Sbjct: 394 KTRP---------------------DVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADR 432
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
+L E +++ L +L T +P + +
Sbjct: 433 MLEEGFESQLNEIL---------------TTIPKSRQT---------------------- 455
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP--LYLVAL 320
M+ SAT+T +KL ++ + P+ L ++ + + + + + K YL+ +
Sbjct: 456 -MLFSATMTSSVDKLIRIGMDKPVRLMVDAKKHTVAGLTQEFVRLRQGKEDKRLAYLMYI 514
Query: 321 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+ + EK IVF + HR+ + G +K E G Q R ++++AFR GK
Sbjct: 515 CEKIYTEKVIVFFRQKKEAHRVRVVFALCG---LKASELHGNMSQEQRIQSVEAFRSGKS 571
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
L+++D +RG+D++ V+ V+NY+ P + Y+HR GRTARAG+ GR TL + + K
Sbjct: 572 AYLLATDVASRGLDIKNVSTVINYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRKV 631
Query: 441 FKKLLQKADNDSCPIHSIPSSLIESLRPVYKSGDV 475
K+ ++ + + + S + E+ R + K D+
Sbjct: 632 VKQAVKASRDQGAKVVSRQVPIEETDRWMKKIKDL 666
>gi|327293469|ref|XP_003231431.1| ATP-dependent RNA helicase DBP6 [Trichophyton rubrum CBS 118892]
gi|326466547|gb|EGD92000.1| ATP-dependent RNA helicase DBP6 [Trichophyton rubrum CBS 118892]
Length = 812
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 169/377 (44%), Gaps = 117/377 (31%)
Query: 2 GISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L + LRAL
Sbjct: 240 GYTEALPVQSAVIPLLAKGPTRYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPIAKLRAL 299
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+++PTR+L QV A C+ C
Sbjct: 300 IIVPTRELVKQVRDA-CELCSS-------------------------------------- 320
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE---------------------DV 159
GL +G AVG +++ DE +++ +E Y PE D
Sbjct: 321 GSGLRIGTAVGSTALKDEQAQI-----MEQTSVYRPESTRRQDDTTMTADEWASFSLVDY 375
Query: 160 LQELQS--------------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
+ E + VDIL+ TPGRL+DHI +T+GFTL+ L +LV+DE DRLL
Sbjct: 376 IAEAEEYSRTLPDHCIESSPCVDILICTPGRLVDHIRSTKGFTLDSLEWLVIDEADRLLN 435
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP----RL 261
E++Q W+ TVL +T P+A GSL+ + K +P +L
Sbjct: 436 ESFQEWVGTVLPALE----------TTEKPAAPGSLQQL--------IKAFSFPVESRKL 477
Query: 262 VKMVLSATLTQDPNKLAQLDLHHPLFL----TTG----------ETRYKLPERLESYKL- 306
K++LSAT+T+D +KL L LH+P + T G ++ LP L +
Sbjct: 478 QKVILSATMTRDISKLNSLRLHNPKLVVVDGTEGDEAGVGEAGPDSNIALPSLLNENSIP 537
Query: 307 ICESKLKPLYLVALLQS 323
+ + KPLYL+ LLQS
Sbjct: 538 VGDGSEKPLYLLKLLQS 554
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D+ ++NVVNYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVVNYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|357152627|ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
[Brachypodium distachyon]
Length = 780
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 193 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 248
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF
Sbjct: 249 VLILTPTRELAAQV------------------HSMIEKLAQF------------------ 272
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ L VG G+ ++V L+S DI+VATPGR++
Sbjct: 273 ---TDIRCCLIVG-------------------GLPTKVQEVA--LRSNPDIVVATPGRII 308
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L L++DE DRLL + + NE
Sbjct: 309 DHLRNSLSVGLEDLAILILDEADRLLELGFSVEI----------NE-------------- 344
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 345 ----LIRMCPKRRQT----------MLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPA 390
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E+ + + L L++ +E+ I+F+ + S HRL + FG +K
Sbjct: 391 TLTEEVVRIRRSREANQEAVLLALCLKTF-KERVIIFSGTKHSAHRLKIM---FGLSGMK 446
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ +L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 447 AAELHGNLTQAQRLEALELFKKQEVDILIATDIAARGIDIVGVRTVINFACPRDVKTYLH 506
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 507 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 539
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 200/455 (43%), Gaps = 105/455 (23%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCK 82
+D+ + TGSGKT ++ +PI++ L R V R + +PTR+LA+Q C
Sbjct: 313 KDVVGGAETGSGKTAAFLIPILERLLYRPKKVPTTRVAIFMPTRELAVQ---------CF 363
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
N+ A F + F L G S D+ + L
Sbjct: 364 NV---------ATKLASFTDITF---------------------ALMAGGFSTRDQEAVL 393
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
RP D+++ATPGR +DH++ T F +EHL LV+DE DR
Sbjct: 394 KTRP---------------------DVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADR 432
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
+L E +++ L +L T +P + +
Sbjct: 433 MLEEGFESQLNEIL---------------TTIPKSRQT---------------------- 455
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP--LYLVAL 320
M+ SAT+T +KL ++ + P+ L ++ + + + + + K YL+ +
Sbjct: 456 -MLFSATMTSSVDKLIRIGMDKPVRLMVDAKKHTVAGLTQEFVRLRQGKEDKRLAYLMYI 514
Query: 321 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+ + EK IVF + HR+ + G +K E G Q R ++++AFR GK
Sbjct: 515 CEKIYTEKVIVFFRQKKEAHRVRVVFALCG---LKASELHGNMSQEQRIQSVEAFRSGKS 571
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
L+++D +RG+D++ V+ V+NY+ P + Y+HR GRTARAG+ GR TL + + K
Sbjct: 572 AYLLATDVASRGLDIKNVSTVINYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRKV 631
Query: 441 FKKLLQKADNDSCPIHSIPSSLIESLRPVYKSGDV 475
K+ ++ + + + S + E+ R + K D+
Sbjct: 632 VKQAVKASRDQGAKVVSRQVPIEETDRWMKKIKDL 666
>gi|189238701|ref|XP_968537.2| PREDICTED: similar to Rs1 CG2173-PA [Tribolium castaneum]
Length = 1657
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 209/468 (44%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q + TI L RD+C + TG+GKT +Y LP ++ L R V R LV++P
Sbjct: 1128 PIQAS----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPVGGPPVTRVLVLVP 1183
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF +
Sbjct: 1184 TRELGVQV------------------YQVTKQLAQFSDI--------------------- 1204
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+GLAVG + + + L K P DI++ATPGRL+DH+ +T
Sbjct: 1205 QIGLAVGGLDLKAQETILRKNP---------------------DIVIATPGRLIDHLKST 1243
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F L+ + L++DE DR+L E + + + I
Sbjct: 1244 PTFGLDSIEVLILDEADRMLDEYFAEQMKEI----------------------------I 1275
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
++C R M+ SAT+T++ LA + L+ P+ L + E + L +
Sbjct: 1276 KQCARTRQT----------MLFSATMTEEVESLAAVSLNKPVRLFVDSNREVAFGLRQEF 1325
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E + + L AL+ E C+VF + + HRL LL L +K+ E G
Sbjct: 1326 VRIRQDKEGDREAI-LAALVCRTFREHCMVFVQTKKQAHRLHILLGL---LGLKVGELHG 1381
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R L+ F+E +I VLV++D RG+D++GV V+N+ PA ++ YIHR GRTA
Sbjct: 1382 NLTQPQRLDALQKFKETQIDVLVATDVAARGLDIQGVQTVINFVMPATVEHYIHRVGRTA 1441
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
RAG+ G +L + E K K +++KA + P+ S IP ++E +
Sbjct: 1442 RAGRAGVSVSLAGEQERKIVKDVVKKAKH---PVKSRVIPPDILEKYK 1486
>gi|74143864|dbj|BAE41247.1| unnamed protein product [Mus musculus]
Length = 323
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 42/277 (15%)
Query: 168 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 227
+I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 12 NIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK--- 68
Query: 228 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
TFL SAT+T+ KL + L +P+
Sbjct: 69 ----TFL-------------------------------FSATMTKKVQKLQRAALKNPVK 93
Query: 288 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 347
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 94 CAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLR 152
Query: 348 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 407
+ G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D P
Sbjct: 153 NLGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIP 209
Query: 408 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
+ K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 210 THSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 246
>gi|401884069|gb|EJT48246.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 435
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 59/365 (16%)
Query: 95 EMCVQFDSLLFISLPQVKDVFAAIAPAV-----------GLSVGLAVGQS-SIADEISEL 142
E+C +SL F ++ AAI PA+ G +V LA +S SIA ++ L
Sbjct: 34 ELCESCESLGFKHPTDIQ--VAAIPPALTGRDIIGIAQTGSAVLLAHPRSDSIAKQVQAL 91
Query: 143 IKRPKLEAGICYDPEDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 199
+ + D++ + L I+VATPGRLMDH+ T+GF+L+ L YLV+DE
Sbjct: 92 GAPIGVRTAVIVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLDE 151
Query: 200 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 259
DRLL + + +L++ + +TFL
Sbjct: 152 ADRLLDLDFGPIIDKLLKVIPKER-------NTFL------------------------- 179
Query: 260 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA 319
SATL+ KL + L+ P+ + +++Y L Y + K YL
Sbjct: 180 ------FSATLSTKVEKLKRASLNKPIQVKV-DSKYSTVSTLMQYYVFFPEVQKDAYLFY 232
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
L+ L I+FTS+V+ RL +LN G I + G QS R +L F+ G
Sbjct: 233 LVNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLH---GQMSQSARLGSLNKFKSGG 289
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
++LV++D +RG+D+ V+ V+N+D P+ K Y+HR GRTARAG+ G+ TL+ + +V
Sbjct: 290 RKILVATDVASRGLDIPSVDLVINFDIPSNSKDYVHRVGRTARAGRSGKSITLVTQYDVV 349
Query: 440 RFKKL 444
K +
Sbjct: 350 MLKGI 354
>gi|319411502|emb|CBQ73546.1| related to DRS1-RNA helicase of the DEAD box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 211/514 (41%), Gaps = 154/514 (29%)
Query: 3 ISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-----RC 56
+SSL F + TI L +D+ + TGSGKT ++ +P ++ L+ RA
Sbjct: 348 LSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTLERLTWRAKGRAQEAK 407
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
R L++ PTR+LA+Q C +S+ + +F + F
Sbjct: 408 TRVLILAPTRELAIQ---------C---------YSVGKSIAKFTDIRFC---------- 439
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L VG S+ + +EL RP ++++ATPGR
Sbjct: 440 -----------LCVGGLSVKSQEAELKLRP---------------------EVVIATPGR 467
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ + FTL+ + LV+DE DR+L + + L +
Sbjct: 468 LIDHVRNSASFTLDDVEILVMDEADRMLEDGFADELNEI--------------------- 506
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
++ C P M+ SAT+T D +L +L L P+ L +
Sbjct: 507 -------VKSC---------PKGARQTMLFSATMTDDVEQLVRLSLKRPVRL------FV 544
Query: 297 LPERLESYKLI-----------------------------------CESKLKPLYLVALL 321
P+R + KLI E +P L+AL
Sbjct: 545 DPKRTTAKKLIQEFVRVRGSGPGGVAGADGLAGVGDEPSTSTVGKRSEDAQRPALLLALC 604
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 381
+ I+F S + H+L + FG L + E G Q R L FR+GK+
Sbjct: 605 TRTFTSQVIIFVRSKKLAHQLKIV---FGLLGLSAGELHGDLSQEQRIDALTDFRDGKVD 661
Query: 382 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
L+++D +RG+D++GV V+NYD P + Y+HR GRTARAG+ GR TL+ + + +
Sbjct: 662 FLLATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADRRML 721
Query: 442 KKLLQKADNDSCPIHSIPSSL-------IESLRP 468
K ++K+ + IP+++ +E L+P
Sbjct: 722 KLAIKKSSAEQIKHRIIPAAVASKMLETLEQLKP 755
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 192/425 (45%), Gaps = 107/425 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 70
+ Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 324 IQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 383
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q C N+ A + + F L V
Sbjct: 384 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 404
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 405 GGFSLREQENVLKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 443
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L LV+DE DR+L + + L +L T +P + +
Sbjct: 444 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---------- 478
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLI 307
M+ SAT+T +KL ++ L+ P+ L T T L + +
Sbjct: 479 -------------MLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTLVQEFVRLRPG 525
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
E K + YL+ L + + + IVF + HR+ + FG L +K E G Q
Sbjct: 526 REDK-RLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIV---FGLLGLKAAELHGSMSQEQ 581
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R K++++FR+G + L+++D +RG+D++GV V+NY+ P + Y+HR GRTARAG+ G
Sbjct: 582 RIKSVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHEIYVHRVGRTARAGRSG 641
Query: 428 RCFTL 432
R T+
Sbjct: 642 RACTI 646
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 186/428 (43%), Gaps = 103/428 (24%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
++ + I L +RD+ + TGSGKT ++ALPI+Q + L A ++ PTR+LA Q
Sbjct: 56 SIQAQAIPSALQDRDIIGVAKTGSGKTAAFALPILQKWWEDP-KPLYACILAPTRELAYQ 114
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ F A+ +G+ VG
Sbjct: 115 IQKQ---------------------------------------FEALGANLGVRCCCIVG 135
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
I + L KRP I+VATPGRL DH+ T+GF+L
Sbjct: 136 GLDIMAQKVALAKRPH---------------------IVVATPGRLQDHLENTKGFSLRS 174
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L YLV+DE DRLL + + +L++ + RR
Sbjct: 175 LKYLVLDEADRLLDMDFGPIIDKILKVIPKE----------------------RRT---- 208
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
M+ SAT++ +L + L +P+ + ++Y L+ Y +
Sbjct: 209 ------------MLFSATMSTKVKRLQRASLVNPVKVEV-SSKYSTVSTLQQYYVFGPHM 255
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K + ++ L++SL + IVFT++V T RL +L I + +S L QS R +
Sbjct: 256 RKEVNMITLVRSLSGKSIIVFTNTVNDTIRLTLMLRALNIGAIPL--HSKLS-QSTRLGS 312
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
L FR G QVL+++D RG+D+ V+ V+NY P K YIHR GRTARAG+ G+ T
Sbjct: 313 LNKFRAGGRQVLIATDVAARGLDIPQVDVVINYGVPQNSKDYIHRVGRTARAGRAGKAIT 372
Query: 432 LLHKDEVK 439
+ + +++
Sbjct: 373 FVTQYDIE 380
>gi|119616690|gb|EAW96284.1| hCG27698, isoform CRA_d [Homo sapiens]
Length = 392
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 42/276 (15%)
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 82 IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK---- 137
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
TFL SAT+T+ KL + L +P+
Sbjct: 138 ---TFL-------------------------------FSATMTKKVQKLQRAALKNPVKC 163
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL +
Sbjct: 164 AVS-SKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 222
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D P
Sbjct: 223 LGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 279
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
+ K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 280 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 315
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 193/452 (42%), Gaps = 122/452 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L V R
Sbjct: 257 LGYTKPSPIQSA----TIPVALQGKDVIAGAVTGSGKTAAFMIPIIERLLFKPSKVAMTR 312
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+LA+Q++ +A+ QF S
Sbjct: 313 VIVLTPTRELAIQISD------------------VAKKIGQFVS---------------- 338
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
GL+ GLAVG ++ + L RP DI++ATPGR +
Sbjct: 339 ----GLTFGLAVGGLNLRQQEQALKARP---------------------DIVIATPGRFI 373
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DHI + F ++ + LV+DE DR+L E +Q L ++ T LPS
Sbjct: 374 DHIRNSASFNVDSVEILVLDEADRMLEEGFQDELKEIM---------------TMLPSKR 418
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+L + SAT+ L L L P+ + P
Sbjct: 419 QNL-----------------------LFSATMNSKIKSLVSLSLRRPVRIMID------P 449
Query: 299 ERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNH 348
+ + KL E LKP L L++ L +++ +VF + E+ HRL +L
Sbjct: 450 PKQAASKLTQEFVRIRKRDNLKPALLFNLIRKLDSNAQKRIVVFVARKETAHRLRIILGL 509
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G + + E G Q R +++ F+ + VL+ +D +RG+D+ + V+NYD P
Sbjct: 510 LG---MAVAELHGSLTQEQRLESVTRFKSLDVPVLICTDLASRGLDIPKIEVVINYDMPK 566
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
+ Y+HR GRTARAG+ GR TL+ + +R
Sbjct: 567 SHEIYLHRVGRTARAGREGRSVTLVGESSQER 598
>gi|154420635|ref|XP_001583332.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121917573|gb|EAY22346.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 449
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 195/451 (43%), Gaps = 101/451 (22%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 71
V ETI L +D+C + TGSGK++++ +PIVQ L + R + +AL++ PTR+LA Q
Sbjct: 33 VQAETIPKILSGQDICATAITGSGKSMAFLIPIVQKLLTFRGLPGPKALIMSPTRELAQQ 92
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 131
+ K C D+ AA ++ L +G
Sbjct: 93 L-----KAVC-------------------------------DMLAA---HCAITSTLVIG 113
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 191
++DE + P A DI++ TPGR +D I + LEH
Sbjct: 114 --GVSDEEQRELLTP-------------------APDIIIGTPGRFIDSIFNAKVLKLEH 152
Query: 192 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 251
L + V+DE DRLL + +++ L T++ ++ A+ L L T +
Sbjct: 153 LQFFVLDEADRLLGKGFESQLNTIVSQLPEKHQTLLFTAT--LNDQVAKLATKIQKKSSE 210
Query: 252 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 311
PY M L+ +TQ +F+ T + +LP
Sbjct: 211 KISINPY-----MELNPNITQ-------------MFIKTKKEERRLP------------- 239
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
YLVAL +++ ++K +VF + H + L + G I E Q+ R++
Sbjct: 240 ----YLVALCRNMCKDKTLVFFPTKALAHHVFLLFKNLG---IASAELHADLSQTARNEA 292
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
++ FRE K+Q L++SD RG+D+ + V+N+ P ++ YIHR GRT RAG+ G +
Sbjct: 293 IEQFRESKVQYLLASDLAARGIDIPDIEYVINFTIPNELERYIHRTGRTGRAGKKGTAIS 352
Query: 432 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 462
+ E KR K +QK +IP +L
Sbjct: 353 MYVTPEEKRVMKKMQKNSPGEVQFMTIPDNL 383
>gi|388854481|emb|CCF51868.1| related to DRS1-RNA helicase of the DEAD box family [Ustilago
hordei]
Length = 935
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 206/511 (40%), Gaps = 161/511 (31%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL------RALVVLPTR 66
+ TI L +D+ + TGSGKT ++ +P ++ L+ RA R L++ PTR
Sbjct: 352 IQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKSRTPLQAKSRVLILAPTR 411
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA+Q C KNI +F + F
Sbjct: 412 ELAIQ-----CYSVGKNI-------------AKFTDIRFC-------------------- 433
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
L VG S+ + +EL RP ++++ATPGRL+DH+ +
Sbjct: 434 -LCVGGLSVKSQEAELKLRP---------------------EVVIATPGRLIDHVRNSAS 471
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
FTL+ + LV+DE DR+L++ + L + ++
Sbjct: 472 FTLDDIEILVMDEADRMLQDGFADELNEI----------------------------VKS 503
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
C P M+ SAT+T D +L +L L P+ L + P+R + KL
Sbjct: 504 C---------PKGARQTMLFSATMTDDVEQLVRLSLKRPVRL------FVDPKRTTAKKL 548
Query: 307 I------------------------------------------CESKLKPLYLVALLQSL 324
+ E +P L+AL
Sbjct: 549 VQEFVRVRGTASAGVAGTVADEAPSTSNAETSSAETSSGGGRKSEDAQRPALLLALCTRT 608
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ I+F S + H+L + FG L + E G Q R L AFR+GK+ L+
Sbjct: 609 FTSQVIIFVRSKKLAHQLKIV---FGLLGLSAGELHGDLSQEQRIDALTAFRDGKVDFLI 665
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
++D +RG+D++GV V+NYD P + Y+HR GRTARAG+ GR TL+ + + + K
Sbjct: 666 ATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADRRMLKLA 725
Query: 445 LQKADNDSCPIHSIPS-------SLIESLRP 468
++K+ + IP+ + +E L+P
Sbjct: 726 IKKSTAEQIKHRIIPAPVACKMLATLEELKP 756
>gi|380487114|emb|CCF38253.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 777
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 203/462 (43%), Gaps = 110/462 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G S P+Q +T+ L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 270 VGFSKPTPIQA----KTVPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSR 325
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C H++A + + F
Sbjct: 326 VVILTPTRELAIQ---------C---------HAVATKLAAYTDIKFT------------ 355
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 356 ---------LAVGGLSLKAQEVELRLRP---------------------DVIIATPGRFI 385
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP +
Sbjct: 386 DHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 430
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ ++ P + + K
Sbjct: 431 QT-----------------------MLFSATMTSSVDKLVRVGMNKPARVMVDSQKNKTV 467
Query: 299 ERL--ESYKLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E +L + K + YLV + +++ E+ IVF + HR + FG L +
Sbjct: 468 GTLVQEFVRLRPGREDKRMGYLVHICKTMHTERVIVFFRQKKEAHRARII---FGLLGMS 524
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P I+ Y+H
Sbjct: 525 CAELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQNIEIYVH 584
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
R GRTARAG+ G TL + + K K ++ I S
Sbjct: 585 RVGRTARAGRTGIAITLAAEPDRKVVKAAVKAGKAQGAKIMS 626
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 206/450 (45%), Gaps = 109/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 314 VGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSR 369
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 370 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 401
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 402 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 429
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 430 DHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTIPKSR 474
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL +L L+ P+ L + +
Sbjct: 475 QT-----------------------MLFSATMTSSVDKLIRLGLNKPVRLMVDSKKQTVG 511
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ + IVF + HR+ + FG + +K
Sbjct: 512 TLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRII---FGLMGLKA 568
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 569 AELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 628
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
GRTARAG+ GR T+ + + K K+ ++
Sbjct: 629 VGRTARAGRSGRACTIAAEPDRKVVKEAVK 658
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 206/450 (45%), Gaps = 109/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 314 VGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSR 369
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 370 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 401
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 402 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 429
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 430 DHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTIPKSR 474
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 475 QT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQTVG 511
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ + IVF + HR+ + FG + +K
Sbjct: 512 TLVQEFVRLRPGREDKRLGYLMFLCKTVYSNRVIVFFRQKKEAHRVRIV---FGLMGLKA 568
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 569 AELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 628
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
GRTARAG+ GR T+ + + K K+ ++
Sbjct: 629 VGRTARAGRSGRACTIAAEPDRKVVKEAVK 658
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 190/446 (42%), Gaps = 106/446 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ F A+ ++ L
Sbjct: 189 ELAAQIGQ---------------------------------------TFEALGASISLRC 209
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 210 AVVVGGLDMVSQSIALGKKPH---------------------IVVATPGRLLDHLEKTKG 248
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 249 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 286
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 287 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 330
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 364
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 331 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLH-----GQLS 385
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 386 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 445
Query: 425 QLGRCFTLLHKDEVKRFKKLLQKADN 450
+ GR +++ + +++ + ++ + A N
Sbjct: 446 RSGRAISIITQYDLELWLRIEKAALN 471
>gi|339250128|ref|XP_003374049.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316969700|gb|EFV53757.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 693
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 199/451 (44%), Gaps = 114/451 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPT 65
P+Q A I L +D+C + TG+GKT +Y +PI++ L + V R R LV++PT
Sbjct: 177 PIQSAC----IPVALLGKDICACAATGTGKTCAYMIPILERLLFKPVGRRITRVLVMVPT 232
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+LA+QV + +A +S
Sbjct: 233 RELAMQVY---------------------------------------ETGTTLAKYTSIS 253
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
+ L+ G + + EA + +P D+++ATPGRL+DH++ +
Sbjct: 254 IALSTGGMDLKSQ----------EAALRLNP-----------DVVIATPGRLIDHLHNSP 292
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
GF L + LV+DE DR+L E ++ + L+ +R
Sbjct: 293 GFNLNGVEILVLDEADRMLDEHFEEQM----------------------------LEIMR 324
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-TRYKLPERLESY 304
C P M+ SAT+T LA + L P+ L E T L R +
Sbjct: 325 LCS----------PTRQAMLFSATMTDKVKDLASVSLKKPVKLFVNENTEMALNLRQQFV 374
Query: 305 KLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
++ E + + L ALL+ K ++F + E HRL LL L I++ E G
Sbjct: 375 RIRKERECSREASLAALLKRSFTSKVLLFAGTKEVCHRLRLLLGL---LGIRVAELHGNL 431
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q+ R L+ F++G + VLV++D RG+DV+GV V+NY P K Y+HR GRTARA
Sbjct: 432 SQAQRIDALEQFKKGVVDVLVATDVAARGIDVQGVKTVINYQMPHVFKLYVHRVGRTARA 491
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
G+ G + + +D+ K K++++ CP
Sbjct: 492 GRSGCAVSFVSEDDRKLVKEIVK-----HCP 517
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 191/444 (43%), Gaps = 106/444 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q E+I L RD+ + TGSGKT S+ LPI+Q L +
Sbjct: 89 MGYKAPTPIQ----SESIPLALQGRDIIGLAETGSGKTASFVLPILQALMEKP------- 137
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
++ FGL+ +AP
Sbjct: 138 ---------------------QSFFGLV-----------------------------LAP 147
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
L+ +++ S+ I+ ++ L G+ P+ + L I+VATPGRL+DH
Sbjct: 148 TRELAYQISLACESLGATIN--VRSTTLVGGMDMVPQSI--ALGKKPHIIVATPGRLLDH 203
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L L +LV+DE DRLL + L +L++ E R TFL
Sbjct: 204 LENTKGFSLRSLKFLVMDEADRLLDMDFGPILDKILKVL--PRERR-----TFL------ 250
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SATL+ L + L +P ++ ++Y E
Sbjct: 251 -------------------------FSATLSSKVESLQRASLSNPARVSISSSKYATVET 285
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ L+ K K +YLV LL + I+F +V T R+ LL G I +
Sbjct: 286 LQQTYLLRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPLH--- 342
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR ++LV++D RG+D+ V+ V+N+D P KTYIHR GRT
Sbjct: 343 GQMSQSARLGALGKFRSKSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGRT 402
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G + + + +V+ ++++
Sbjct: 403 ARAGKSGTAISFVTQYDVEIWQRI 426
>gi|295656812|ref|XP_002788992.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285824|gb|EEH41390.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 815
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 151/289 (52%), Gaps = 43/289 (14%)
Query: 7 FPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
FP+Q AV++ E PG DLCI++ TGSGKTL+YALP+V+ + A+ LR LV
Sbjct: 247 FPIQAAVFELLSKGENRHPG----DLCISAATGSGKTLAYALPMVEGIEQSAIPKLRGLV 302
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
++PTR+L Q A C+ C GL ++ ++ + L I Q+ FA+
Sbjct: 303 IVPTRELVKQARDA-CELCATGT-GLRIGTAVGTTSLKEEQALLIKRDQLYSPFASQT-- 358
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYD--PEDVLQELQSAVDILVATPGRLMD 179
LSV + A + E I EA + + P V +DIL+ TPGRL+D
Sbjct: 359 --LSVQSMSSEDWAAFNVQEYI----AEANVSHTALPNHVTTS-SPCIDILICTPGRLVD 411
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV---LQLTRSDNENRFSDASTFLPS 236
HI T+GFTLEHL +LVVDE DRLL E++Q W V L++ R + ++ S F +
Sbjct: 412 HIRCTQGFTLEHLEWLVVDEADRLLNESFQEWTEVVFPALEMERIVSNSK----SGFFLN 467
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 285
G C + R +L K++LSAT+T+D KL L L +P
Sbjct: 468 QLG-------CRIHRR-------QLQKIILSATVTRDIPKLNSLRLRNP 502
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 330 IVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
+VFT S ES RL LL L +I + + + KTL A+R GKI +++++D
Sbjct: 640 LVFTKSSESASRLALLLALMHPPLAKRIGTLTKSNKSTTSRKTLSAYRNGKISIVIATDC 699
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
+RG+D+ + +VVNYD PA + +YIHR GRTARAG G +T + E + F + K
Sbjct: 700 ASRGLDLPSLTHVVNYDVPASLTSYIHRVGRTARAGNSGSAWTFVAHREGRWFSNEIMK- 758
Query: 449 DNDSCP 454
CP
Sbjct: 759 ----CP 760
>gi|60649461|gb|AAH91696.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
Length = 323
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 141/276 (51%), Gaps = 42/276 (15%)
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 13 IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK---- 68
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
TFL SAT+T+ KL + L +P+
Sbjct: 69 ---TFL-------------------------------FSATMTKKVQKLQRAALKNPVKC 94
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL +
Sbjct: 95 AVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 153
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D P
Sbjct: 154 LGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 210
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
+ K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 211 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 246
>gi|281208721|gb|EFA82896.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 803
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 185/426 (43%), Gaps = 116/426 (27%)
Query: 33 TGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 90
TGSGKT ++ LPI++ L R V R +R LV+LPTR+LALQ C
Sbjct: 221 TGSGKTAAFLLPILERLLYRDVDNRAIRVLVLLPTRELALQ---------C--------- 262
Query: 91 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 150
S+ E QF ++ L VG S + EL KRP
Sbjct: 263 QSVLENLAQF---------------------TNITSCLVVGGLSNKVQEVELRKRP---- 297
Query: 151 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 210
D+++ATPGRL+DH+ L+ L LV+DE DRLL ++
Sbjct: 298 -----------------DVVIATPGRLIDHLLNAHDVGLDDLEILVLDEADRLLDMGFKD 340
Query: 211 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 270
L K + C R ++ SATL
Sbjct: 341 ELE----------------------------KIVESCPANRQ----------SLLFSATL 362
Query: 271 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYL---VALLQSLGEE 327
+ + LA+L L P+ + + Y++ LE + K++P L ALL SL
Sbjct: 363 SDEVKTLAKLSLKQPIRVAV-DALYQVASTLEQEFV----KIRPTQLGDRPALLLSLASR 417
Query: 328 -----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 382
I+F S + HRLC + FG + E G Q R ++L+ FR+GK+Q
Sbjct: 418 VFNTGGTIIFFKSKKEVHRLCII---FGLAGLSAAELHGDLSQEQRFESLQLFRDGKVQF 474
Query: 383 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 442
L++SD RG+DV GV V+NY+ P + YIHR GRTARAG GR + + + + K K
Sbjct: 475 LLASDVAARGLDVLGVKTVINYNIPRNLAQYIHRVGRTARAGAQGRACSFVTEGDRKILK 534
Query: 443 KLLQKA 448
++ +A
Sbjct: 535 DIVSRA 540
>gi|157125871|ref|XP_001654429.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108873494|gb|EAT37719.1| AAEL010317-PA [Aedes aegypti]
Length = 804
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 211/468 (45%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L + A R LV++P
Sbjct: 206 PIQAA----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVP 261
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L QV + +++ QF S+
Sbjct: 262 TRELGAQV------------------YQVSKQLTQFTSI--------------------- 282
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VG+A+G G+ ++ + L++ D+++ATPGRL+DHI T
Sbjct: 283 EVGIAIG-------------------GLDVKAQEAV--LRTNPDVVIATPGRLIDHIKNT 321
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + ++Q
Sbjct: 322 PSFSLDSIEVLILDEADRMLDEYFAEQMKEIIQ--------------------------- 354
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGET-RYKLPERL 301
C R M+ SAT+T LA + L P+ F+ +T + L +
Sbjct: 355 -SCSKTRQT----------MLFSATMTDQVKDLAAVSLTKPVKVFVNNNQTVAFNLRQEF 403
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E+ +PL L AL+ + C+VF + ++ HRL LL L +K E G
Sbjct: 404 IRIREGREADREPL-LAALICRTFHDHCMVFVQTKKTAHRLRILLGL---LGVKSGELHG 459
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
QS R ++LK F++ ++ VL+++D RG+D+ GV V+N+ P ++ YIHR GRTA
Sbjct: 460 DLTQSQRLESLKQFKDEQVDVLIATDVAARGLDISGVKTVINFVMPITMEHYIHRVGRTA 519
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
RAG+ G +L + E K K +++ A P+ + IP+ +++ R
Sbjct: 520 RAGKAGVSVSLAGELERKIVKDIIKNA---VSPVKNRIIPTEIVDKYR 564
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 196/449 (43%), Gaps = 109/449 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRCLRALVVL 63
P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L ++ R ++++
Sbjct: 198 PIQAS----TIPVALLGKDIVGNAVTGSGKTAAFVIPMLERLLYRDKSKNAAATRCVILV 253
Query: 64 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 123
PTR+LA+Q C ++ +A H+ C
Sbjct: 254 PTRELAVQ---------CFDVATKLAAHTDVRFC-------------------------- 278
Query: 124 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 183
L VG S+ + + L RP D+++ATPGRL+DH+
Sbjct: 279 ----LIVGGLSVKAQEASLRLRP---------------------DVVIATPGRLIDHLRN 313
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
F L+ + LV+DE DR+L + + L ++Q
Sbjct: 314 APQFGLDAVDILVLDEADRMLSDGFADELAEIVQA------------------------- 348
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
C P R M+ SAT+T ++L ++ L+ P+ L R ++
Sbjct: 349 ---C---------PRGRQT-MLFSATMTDSVDELVKMSLNKPVRLFVDAKRTTARSLVQE 395
Query: 304 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
+ + + + L AL + + + I+F S + H++ F L + E G
Sbjct: 396 FVRVRREEDRGGMLAALCKRTFKARAIIFFRSKKLAHQMRVA---FALLNLNAGELHGDL 452
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R ++L+ FR+G+I L+++D +RG+D++GV V+NYD P + Y+HR GRTARA
Sbjct: 453 TQEQRLRSLQQFRDGQIDFLMATDLASRGLDIKGVEVVINYDMPGQLAQYLHRVGRTARA 512
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDS 452
G GR TL+ + + K K ++ + N S
Sbjct: 513 GARGRSVTLVGESDRKMLKAAIKHSANAS 541
>gi|302499370|ref|XP_003011681.1| DEAD/DEAH box helicase, putative [Arthroderma benhamiae CBS 112371]
gi|291175233|gb|EFE31041.1| DEAD/DEAH box helicase, putative [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 150/299 (50%), Gaps = 33/299 (11%)
Query: 2 GISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V LRAL
Sbjct: 240 GYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAKLRAL 299
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+++PTR+L QV A C+ C GL ++ ++ + + V + +
Sbjct: 300 IIVPTRELVKQVRDA-CELCSSG-SGLRIGTAVGSTALKDEQAQIMEQISVYRPESTRSQ 357
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ S+ D I+E + K G C E VD+L+ TPGRL+DH
Sbjct: 358 NGTIMTADEWASFSLVDYIAEAEEYSKTLPGHCI-------ESSPCVDVLICTPGRLVDH 410
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL + + P+A GS
Sbjct: 411 IRSTKGFTLDSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PAATGS 460
Query: 241 LKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR 294
L+ + K YP +L K++LSAT+T+D KL L LH+P L + G R
Sbjct: 461 LEQL--------IKALSYPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDGAER 511
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|67517117|ref|XP_658442.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
gi|40746512|gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
Length = 1676
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 193/431 (44%), Gaps = 107/431 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLP 64
F + Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++P
Sbjct: 810 FTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMP 869
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+Q C N+ +A ++ C
Sbjct: 870 TRELAVQ---------CYNVATKLATYTDITFC--------------------------- 893
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VG S+ ++ + L KRP D+++ATPGR +DH+ +
Sbjct: 894 ---QLVGGFSLREQENVLKKRP---------------------DVIIATPGRFIDHMRNS 929
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
FT++ L LV+DE DR+L + + L +L T +P + +
Sbjct: 930 ASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---- 970
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
M+ SAT+T +KL ++ L+ P+ L T T L +
Sbjct: 971 -------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTLVQEF 1011
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E K + YL+ L + + + IVF + HR+ + FG L +K E G
Sbjct: 1012 VRLRPGREDK-RLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIV---FGLLGLKAAELHG 1067
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R K++++FR+G + L+++D +RG+D++GV V+NY+ P + Y+HR GRTA
Sbjct: 1068 SMSQEQRIKSVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHEIYVHRVGRTA 1127
Query: 422 RAGQLGRCFTL 432
RAG+ GR T+
Sbjct: 1128 RAGRSGRACTI 1138
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 203 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 258
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA QV HS+ E QF +
Sbjct: 259 VLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC------------ 288
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ E++ L+S DI+VATPGR++
Sbjct: 289 -----LIVG---GLSTKVQEVA----------------------LRSMPDIVVATPGRII 318
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L +++DE DRLL + A + +
Sbjct: 319 DHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL----------------------- 355
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 356 -----IRMC---------PKRRQT-MLFSATMTEEIDELIKLSLNKPVRLEADPSLKRPA 400
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + ES + + L L++ + I+F+ + +S HRL + FG +K
Sbjct: 401 TLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKIV---FGLSGMK 456
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 457 AAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFACPRDVKTYLH 516
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 517 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 549
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 107/437 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P+QV E I L RD+ + TGSGKT +++LPI+Q L + AL++ PTR+
Sbjct: 71 PIQV----EAIPSALQGRDVIGLAQTGSGKTAAFSLPILQKLWENP-QPFFALILAPTRE 125
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ Q SL +G+
Sbjct: 126 LAYQISQ------------------------QVTSL---------------GSPLGVRTA 146
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + + L KRP ++VATPGRLMDH+ T+GF
Sbjct: 147 VIVGGMDMMSQSIALSKRPH---------------------VIVATPGRLMDHLENTKGF 185
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L+++ +LV+DE DRLL + + +L++ + +T+L
Sbjct: 186 SLKNVKFLVMDEADRLLDMDFGPIIDKILKVIPKER-------NTYL------------- 225
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T KL + L+ P+ + T+Y L + L+
Sbjct: 226 ------------------FSATMTTKVAKLQRASLNKPVRVEVA-TKYSTVSTLLQHYLL 266
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K +L+ ++ L I+FT +V RL +L G I + G QS+
Sbjct: 267 LPLKAKDTHLLYIVTELSSCSMIIFTRTVVDAQRLSIMLRRLGFPAIPLH---GQMSQSL 323
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R +L F+ G +LV++D +RG+D+ V+ VVNYD P K Y+HR GRTARAG+ G
Sbjct: 324 RLASLNKFKSGGRSILVATDVASRGLDIPLVDLVVNYDMPINSKDYVHRVGRTARAGRSG 383
Query: 428 RCFTLLHKDEVKRFKKL 444
+ T++ + +V+ +++
Sbjct: 384 KSITMVTQYDVEILQRI 400
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 191/435 (43%), Gaps = 106/435 (24%)
Query: 16 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 75
E I L +D+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q++
Sbjct: 44 EVIPHALEGKDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAYQISQ- 101
Query: 76 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 135
QF+SL +G+ + VG
Sbjct: 102 -----------------------QFESL---------------GSDMGVRCAVIVGGVPT 123
Query: 136 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 195
+ L K+P ++VATPGRL+ H+ T+GF L +L +L
Sbjct: 124 VPQAVALAKKPH---------------------VVVATPGRLLWHLQETKGFGLANLKFL 162
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE DRLL + + +L++ +T+L
Sbjct: 163 VLDEADRLLDMDFGQVIDDILKVIPKQR-------TTYL--------------------- 194
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
SAT+T KL + L +P+ + +Y+ L Y L K K +
Sbjct: 195 ----------FSATMTSKVAKLQRASLKNPVRVEVA-GKYQTVSTLLQYYLFIPLKDKDV 243
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 375
LV L+ +L + I+FT +V RL +L G + + G QS R L F
Sbjct: 244 NLVYLVNALAQNSIIIFTRTVHDAARLTIVLRTLGFSAVPLH---GQLSQSQRLGALAKF 300
Query: 376 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
+ G ++LV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL+ +
Sbjct: 301 KSGGRKILVATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRSGKSITLVTQ 360
Query: 436 ---DEVKRFKKLLQK 447
+ V+R + +++K
Sbjct: 361 YDVELVQRIESVIEK 375
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 206/450 (45%), Gaps = 109/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 317 VGFSAPTPIQ----KKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSR 372
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 373 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 404
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 405 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 432
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 433 DHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTIPKSR 477
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 478 QT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQTVG 514
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ + IVF + HR+ + FG + +K
Sbjct: 515 TLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRII---FGLMGLKA 571
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 572 AELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 631
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
GRTARAG+ GR T+ + + K K+ ++
Sbjct: 632 VGRTARAGRSGRACTIAAEPDRKVVKEAVK 661
>gi|46124501|ref|XP_386804.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
gi|91206590|sp|Q4I830.1|DRS1_GIBZE RecName: Full=ATP-dependent RNA helicase DRS1
Length = 796
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 204/466 (43%), Gaps = 119/466 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q ++I L +D+ + TGSGKT ++ LPI++ L R + R
Sbjct: 274 VGFTKPTPIQA----KSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKKIPTTR 329
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+LPTR+LA+Q C H++A F + F
Sbjct: 330 VVVLLPTRELAIQ---------C---------HAVATKLAAFTDIKFT------------ 359
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 360 ---------LAVGGLSLKAQELELKLRP---------------------DVIIATPGRFI 389
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F+++ + LV+DE DR+L + + L +L T LP +
Sbjct: 390 DHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 434
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T ++L Q+ L+ P + + +
Sbjct: 435 QT-----------------------MLFSATMTSSVDRLIQIGLNRPARVMVNSQKKTVT 471
Query: 299 ERLESYKLICESKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
++ + +L+P YL + ++L +E+ I+F + HR + FG
Sbjct: 472 TLVQEF-----VRLRPGREDKRMGYLAHVCKNLYKERVIIFFRQKKDAHRARII---FGL 523
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
L + E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P +
Sbjct: 524 LGLSCAELHGSMNQTQRISSVEDFRDGKVAYLLATDLASRGLDIKGVDTVINYEAPQSLD 583
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
Y+HR GRTARAG+ G T+ + + K K ++ I S
Sbjct: 584 IYVHRVGRTARAGRKGVALTIAAESDRKVVKAAVKAGKAQGAKIVS 629
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 192/444 (43%), Gaps = 104/444 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q+A I L RD+ + TGSGKT ++ +P++ L R + +
Sbjct: 61 MGWQAPTPIQMAA----IPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQR-IYCV 115
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ P+R+L C+ Q+ + F A++
Sbjct: 116 VLAPSREL------------CE---------------------------QIAEQFRALSS 136
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
++ L V + +G + + S L KRP ++VA+PGRL DH
Sbjct: 137 SIALQVCVIIGGVDMVHQASALAKRPH---------------------VIVASPGRLADH 175
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L + LV+DE DRLL + + L ++ ++ + TFL
Sbjct: 176 VENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQ-------TFL------ 222
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SAT+T+ +KL ++ L P+ + + +Y E
Sbjct: 223 -------------------------FSATMTKKLSKLQKMALKDPISVQVDD-KYSTAEN 256
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ L+ K K YL ALL IVF + + R L I
Sbjct: 257 LDQRFLLVPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKFTTICKVCLH 316
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q+ RS+ L+ F+ G + +LV+++ RG+D+ V V+N+D P K YIHR GRT
Sbjct: 317 GKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELVINFDIPECSKDYIHRVGRT 376
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G T++ + +V+ F+++
Sbjct: 377 ARAGRSGLALTVVTQYDVELFQRI 400
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 191/444 (43%), Gaps = 105/444 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ +E+I L RD+ + TGSGKT ++ +P++Q L A + L L + PTR+LA Q+
Sbjct: 145 IQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLL-EAPQGLFCLALAPTRELAYQI 203
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
D F AI +G+ + VG
Sbjct: 204 ---------------------------------------ADQFNAIGSTIGVKTCVLVGG 224
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ L K+P ++V +PGR++ H+ T+GF L +
Sbjct: 225 IDSMSQSLALAKKPH---------------------VVVGSPGRVLHHLEHTKGFNLRSI 263
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
Y ++DE DRL ++ + +L++ + +T+L
Sbjct: 264 KYFIMDEADRLFSADFEEEVNNILKVIPKER-------NTYL------------------ 298
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T KL + L +P+ + ++Y+ + L L K
Sbjct: 299 -------------FSATMTSKVAKLQRASLVNPVKVQVA-SKYQTVDTLLQQYLFVPFKY 344
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL +L L I+FTS+ S+ ++ +L + G I I +G Q R +L
Sbjct: 345 KDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPI---NGDMDQGKRLASL 401
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F++G +LV++D RG+D+ V+ V+NYD P K Y+HR GRTARAG GR T+
Sbjct: 402 NKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITI 461
Query: 433 LHKDEVKRFKKL--LQKADNDSCP 454
+ + +V+ ++++ + K DS P
Sbjct: 462 VTQYDVEMYQRIEFVLKKKLDSFP 485
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 185 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 240
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA Q+ HS+ E QF
Sbjct: 241 VLILTPTRELAAQI------------------HSMVEKLAQF------------------ 264
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ L VG ++ +I E+ L+S DI+VATPGR++
Sbjct: 265 ---TDIRCCLIVG--GLSTKIQEVA-------------------LRSMPDIVVATPGRII 300
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L +++DE DRLL + A + +
Sbjct: 301 DHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL----------------------- 337
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 338 -----IRMC---------PKRRQT-MLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPA 382
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + ES + + L L++ + I+F+ + +S HRL + FG +K
Sbjct: 383 TLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGLSGMK 438
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 439 AAELHGNLTQAQRLEALELFKKKEVDFLIATDVAARGIDIVGVQTVINFACPRDVKTYLH 498
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 499 RVGRTARAGREGYAVTFVTDDDRCLLKAIAKKA 531
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 206/450 (45%), Gaps = 109/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 315 VGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSR 370
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 371 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 402
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 403 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 430
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 431 DHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTIPKSR 475
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 476 QT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQTVG 512
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ + IVF + HR+ + FG + +K
Sbjct: 513 TLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRII---FGLMGLKA 569
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 570 AELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 629
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
GRTARAG+ GR T+ + + K K+ ++
Sbjct: 630 VGRTARAGRSGRACTIAAEPDRKVVKEAVK 659
>gi|307214987|gb|EFN89832.1| Probable ATP-dependent RNA helicase DDX27 [Harpegnathos saltator]
Length = 734
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 207/466 (44%), Gaps = 119/466 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L + + R LV++P
Sbjct: 180 PIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLMYKPLDGPAVTRVLVLVP 235
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF S+
Sbjct: 236 TRELGVQV------------------YQVTKQLSQFTSV--------------------- 256
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
GL+VG + + S L + P DI++ATPGRL+DH+ T
Sbjct: 257 ETGLSVGGLDVKVQESILRRNP---------------------DIVIATPGRLIDHLRNT 295
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + + +
Sbjct: 296 PTFSLDIIEVLILDEADRMLDEYFAEQMKYI----------------------------V 327
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
+C R M+ SAT+T++ LA + L P+ + + + + L R
Sbjct: 328 NQCSRSRQT----------MLFSATMTEEVKDLAAVSLDKPIKIFVDSNQDVAFNL--RQ 375
Query: 302 ESYKLICESK-LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
E ++ E + + L AL+ + +VF + + HRL LL G +K+ E
Sbjct: 376 EFIRIRKEREGDREAILAALICRTFHDHVMVFVQTKKQAHRLHILLGLLG---VKVGELH 432
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R + L+ F++ I +L+++D RG+D+ GV V+N+ PA ++ YIHR GRT
Sbjct: 433 GNLTQPQRLENLQEFKDEIINILIATDVAARGLDISGVKTVINFVMPATLQHYIHRVGRT 492
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIE 464
ARAG++G +L + E K+++++A N P+ + IP +IE
Sbjct: 493 ARAGRVGVSVSLAGEQERSLVKEVIKRAKN---PVKNRIIPPDIIE 535
>gi|171685610|ref|XP_001907746.1| hypothetical protein [Podospora anserina S mat+]
gi|170942766|emb|CAP68419.1| unnamed protein product [Podospora anserina S mat+]
Length = 798
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 204/461 (44%), Gaps = 109/461 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L ++ V R
Sbjct: 291 VGFTKPTPIQ----SKTIPIALMGKDVVGGAVTGSGKTGAFLVPILERLLYRSKKVATTR 346
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q ++ K +A H+ + C
Sbjct: 347 VVILAPTRELAIQCHAVGVK---------LASHTDIKFC--------------------- 376
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 377 ---------LAVGGLSLKVQEQELRLRP---------------------DVVIATPGRFI 406
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F +E + LV+DE DR+L + + L +L T LP +
Sbjct: 407 DHMRNSASFAVETVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 451
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T ++L + L+ P+ + +
Sbjct: 452 QT-----------------------MLFSATMTSSVDRLIRAGLNKPVRIQVDSQKKTAS 488
Query: 299 E-RLESYKLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
R E +L + K + YLV + ++L E+ I+F + H + FG L +
Sbjct: 489 NLRQEFVRLRPGREKKRMGYLVHICKTLYTERVIIFFRQKKIAHETRII---FGLLGMSC 545
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ YIHR
Sbjct: 546 AELHGSMNQAQRIASVEAFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQNLEIYIHR 605
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
GRTARAG+ G TL + + K K ++ I S
Sbjct: 606 IGRTARAGRSGVALTLAAEPDRKVVKAAVRAGKAQGAKITS 646
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 203/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 201 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 256
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA Q+ HS+ E QF
Sbjct: 257 VLILTPTRELAAQI------------------HSMVEKLAQF------------------ 280
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ L VG ++ +I E+ L+S DI+VATPGR++
Sbjct: 281 ---TDIRCCLIVG--GLSTKIQEVA-------------------LRSMPDIVVATPGRII 316
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L +++DE DRLL + A + +
Sbjct: 317 DHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL----------------------- 353
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ ++L +L L+ P+ L + +
Sbjct: 354 -----IRMC---------PKRRQT-MLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPA 398
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + ES + + L L++ + I+F+ + +S HRL + FG +K
Sbjct: 399 TLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGLSGMK 454
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +KTY+H
Sbjct: 455 AAELHGNLTQAQRLEALELFKKKEVDFLIATDVAARGIDIVGVQTVINFACPRDVKTYLH 514
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 515 RVGRTARAGREGYAVTFVTDDDRCLLKAIAKKA 547
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 178/428 (41%), Gaps = 105/428 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + +++ L RD+ + TGSGKT ++A+PI+Q L A A V+ PTR
Sbjct: 87 FSTPTPIQAQSLPHSLQGRDIIGIAQTGSGKTAAFAIPILQALWE-AQTPYFACVLAPTR 145
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q+ ++ F A+ +GL
Sbjct: 146 ELAYQI---------------------------------------RETFDALGVNMGLRC 166
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
VG + ++ EL+++P ++VATPGRLMDH+ T+G
Sbjct: 167 STIVGGMDMMEQAKELMRKPH---------------------VIVATPGRLMDHLENTKG 205
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L+ L YLV+DE DRLL + L +L +
Sbjct: 206 FSLKALKYLVMDEADRLLDMEFGPVLDRILNII--------------------------- 238
Query: 247 CGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 305
PR K L SATLT KL + L P+ + + +Y + L
Sbjct: 239 ------------PRERKTYLFSATLTSKVEKLQRASLIDPVKIAVND-KYSTVDTLIQTL 285
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
++ K YL+ LL + IVF + ++ L G I + G Q
Sbjct: 286 MVVPDGYKNTYLIYLLNEYVGKSVIVFARTCAHAQKVALLARILGFSAIPL---HGQLTQ 342
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
+ R L F+ G Q+LV++D RG+D+ V+ VVNYD P K YIHR GRTARAG+
Sbjct: 343 AQRLGALNKFKSGDKQILVATDVAARGLDIPSVDLVVNYDIPTDSKAYIHRVGRTARAGR 402
Query: 426 LGRCFTLL 433
G+ +L+
Sbjct: 403 SGKSVSLV 410
>gi|119494337|ref|XP_001264064.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
gi|119412226|gb|EAW22167.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
Length = 863
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 158/363 (43%), Gaps = 119/363 (32%)
Query: 19 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 78
GP DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q A C+
Sbjct: 288 GPRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELVKQAREA-CE 346
Query: 79 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 138
C A GL +G AVG +I DE
Sbjct: 347 LC--------------------------------------ATGSGLRIGSAVGNVAIKDE 368
Query: 139 ISELIKRPKLEAGICYDPE-----------------------------------DVLQEL 163
L++ CY PE +Q
Sbjct: 369 QRTLMR-----VDQCYGPELSKQRQTVDLTGEDWTNFNLMNYLAETSDLSESLPGYVQRA 423
Query: 164 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL--TRS 221
+ +DIL+ TPGRL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V+ R
Sbjct: 424 EPNIDILICTPGRLVDHLRYTKGFTLEHLEWLVIDEADRLLNESFQEWVDVVMNSLDARK 483
Query: 222 DNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
D P FGS K + + G+ ++ PR K++LSAT+T+D +KL L
Sbjct: 484 D------------PKTFGSSGKFMAQLGLPIQSRE---PR--KVILSATMTRDISKLNSL 526
Query: 281 DLHHPLFL-------------------TTGETRYKLPERLESYKL-ICESKLKPLYLVAL 320
L +P + TT + ++ LP L+ Y + + + KPLYL+ L
Sbjct: 527 RLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFTLPSTLKEYSVSVGDGSQKPLYLLQL 586
Query: 321 LQS 323
LQS
Sbjct: 587 LQS 589
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 15/130 (11%)
Query: 329 CIVFTSSVESTHRLC--------TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
++FT S ES RL +L NH G + IK + S KTL A+R GKI
Sbjct: 692 VLIFTKSSESASRLSRLISLLDPSLANHIGTI---IKS----NKSSASRKTLTAYRRGKI 744
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
++V++D +RG+D+E + +VVNYD P + TY+HR GRTARAG+ G +TL+ E
Sbjct: 745 SIIVATDRASRGLDLESLTHVVNYDVPPSVTTYVHRVGRTARAGKEGSAWTLVAHREGHW 804
Query: 441 FKKLLQKADN 450
F + K +
Sbjct: 805 FVNEISKGSD 814
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 206/450 (45%), Gaps = 109/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 315 VGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSR 370
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A F + F L
Sbjct: 371 VAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL---------- 402
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 403 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 430
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 431 DHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTIPKSR 475
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L + +
Sbjct: 476 QT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQTVG 512
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L +++ + IVF + HR+ + FG + +K
Sbjct: 513 TLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIV---FGLMGLKA 569
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 570 AELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 629
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
GRTARAG+ GR T+ + + K K+ ++
Sbjct: 630 VGRTARAGRSGRACTIAAEPDRKVVKEAVK 659
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 185/420 (44%), Gaps = 85/420 (20%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ + TGSGKT ++ALPI+Q L + R L A V+ PTR+LA Q
Sbjct: 59 RDIIGVASTGSGKTAAFALPILQKLWDDP-RGLFACVIAPTRELAYQ------------- 104
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
I +H F A+ A+G+ VG + L K
Sbjct: 105 ---ITEH-----------------------FEALGSAMGVRCATVVGGIDEMSQAVALAK 138
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+P ++VATPGRL H+ T+GF+L L +LV+DE DRLL
Sbjct: 139 KPH---------------------VVVATPGRLQYHLENTKGFSLRSLKFLVLDEADRLL 177
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+ L +L++ + +T+L F + T + ++R P V++
Sbjct: 178 DMDFGPILDKILKVIPQER-------TTYL---FSATMTTKVAKLQRASLSNP----VRV 223
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
+S K A L L L RY L Y L K + L+ L SL
Sbjct: 224 EVS-------EKYAPLLLIRLLMRLRVSRRYSTVSTLLQYYLFIPLVQKDVNLMYLANSL 276
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
I+FT +V RL ++ G + + G QS R L F+ G +VLV
Sbjct: 277 ASNSIIIFTRTVHDCQRLAIMMRTLGFPAVPLH---GQLSQSARLGALGKFKSGGRKVLV 333
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ T + + +V+ +++
Sbjct: 334 ATDVASRGLDIPHVDAVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELVQRI 393
>gi|225561306|gb|EEH09586.1| ATP-dependent RNA helicase DBP6 [Ajellomyces capsulatus G186AR]
Length = 843
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 155/327 (47%), Gaps = 91/327 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G + FP+Q AV E +G G DLCI++ TGSGKTL+YALP+V + + LR
Sbjct: 260 GYTEAFPIQAAVL-ELLGTGKHRHSGDLCISAATGSGKTLAYALPLVAGIEQSSYPRLRG 318
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 319 LVVVPTRELVWQAREA-CELC--------------------------------------A 339
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK +L ++ ++ ++ + E
Sbjct: 340 TGTGLRIGTAVGTASLNEEQASLIKHEQLYSPCTDQIKNIQQMSADSWTSFNIQEYISEA 399
Query: 164 QSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+S+ VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q
Sbjct: 400 ESSPSAFPNHVAIPSPSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQ 459
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLS 267
W+ V+ + NR + GV E G+K PRL K++LS
Sbjct: 460 EWVEVVIPAL---DRNRID-------------VNAKSGGVLQELGWKTC-KPRLQKIILS 502
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETR 294
AT+T+D +KL L L +P + + + R
Sbjct: 503 ATMTRDISKLQALRLRNPKLVVSDDPR 529
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 370
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
TL A+R GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAYRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 431 TLLHKDEVKRF 441
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|47211205|emb|CAF90162.1| unnamed protein product [Tetraodon nigroviridis]
Length = 517
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 191/429 (44%), Gaps = 106/429 (24%)
Query: 43 LPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 100
LP+++ L R + R LV++PTR+L +QV HS++ QF
Sbjct: 2 LPVLERLVYKPRTSQVTRVLVLVPTRELGIQV------------------HSVSRQLAQF 43
Query: 101 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 160
S+ + LAVG G+ ++V
Sbjct: 44 TSI---------------------TTCLAVG-------------------GLDLKSQEVA 63
Query: 161 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 220
L++ D+L+ATPGRL+DH++ T F L H+ L++DE DR+L E ++ + +++L
Sbjct: 64 --LRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEIIRL-- 119
Query: 221 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
C R M+ SAT++++ LA +
Sbjct: 120 --------------------------CSYNRQ----------TMLFSATMSEEVKDLAAV 143
Query: 281 DLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVES 338
L P+ + P + + I +K + + ALL ++ + FT + +
Sbjct: 144 SLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAVVAALLTRTFQDHVMCFTQTRKQ 203
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
HRL LL G +K+ E G Q+ R + L+ F++ +I +LV++D RG+D++GV
Sbjct: 204 AHRLHILLGLMG---LKVGELHGELSQNQRLENLRRFKDEQIDILVATDVAARGLDIDGV 260
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
V+N+ P+ +K Y+HR GRTARAG+ GR +L+ + E K K++++ A S +
Sbjct: 261 KTVINFTMPSTMKHYVHRVGRTARAGRSGRSVSLVGESERKILKEVVKSAKT-SVKARVL 319
Query: 459 PSSLIESLR 467
P +I R
Sbjct: 320 PPEVILKFR 328
>gi|218186850|gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
Length = 802
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 201/453 (44%), Gaps = 111/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R +R
Sbjct: 212 LGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIR 267
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L++ PTR+LA V HS+ E QF +
Sbjct: 268 VLILTPTRELAAPV------------------HSMIEKLAQFTDIRCC------------ 297
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L VG G S+ E++ L+S DI+VATPGR++
Sbjct: 298 -----LIVG---GLSTKVQEVA----------------------LRSMPDIVVATPGRII 327
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + LE L L++DE DRLL + A + +
Sbjct: 328 DHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL----------------------- 364
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-- 296
IR C P R M+ SAT+T++ N+L L L+ P+ L + +
Sbjct: 365 -----IRMC---------PRRRQT-MLFSATMTEEINELVTLSLNKPVRLEADPSLKRPA 409
Query: 297 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L E + + E+ + + L L++ ++K I+F+ + S HRL + FG +K
Sbjct: 410 TLTEEVVRIRRAREANQEAVLLALCLKTF-KDKVIIFSGTKHSAHRLKII---FGLSGMK 465
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +TY+H
Sbjct: 466 AAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLH 525
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
R GRTARAG+ G T + D+ K + +KA
Sbjct: 526 RVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 558
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 191/444 (43%), Gaps = 106/444 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG + P+Q E+I L RD+ + TGSGKT S+ LPI+Q L +
Sbjct: 90 MGYKAPTPIQ----SESIPLALQGRDIIGLAETGSGKTASFVLPILQALMEKP------- 138
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+ FGL+ +AP
Sbjct: 139 ---------------------QPFFGLV-----------------------------MAP 148
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
L+ +++ S+ I+ ++ L G+ P+ + L I+VATPGRL+DH
Sbjct: 149 TRELAYQISLACESLGATIN--VRSTTLVGGMDMVPQSI--ALGKKPHIIVATPGRLLDH 204
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ T+GF+L +L +LV+DE DRLL + L +L++ E R TFL
Sbjct: 205 LENTKGFSLRNLKFLVMDEADRLLDMDFGPILDKILKVL--PRERR-----TFL------ 251
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
SATL+ L + L +P ++ ++Y E
Sbjct: 252 -------------------------FSATLSSKVESLQRASLSNPARVSISSSKYATVET 286
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
L+ ++ K K +YLV LL + I+F +V T R+ LL G I +
Sbjct: 287 LQQTYILRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPLH--- 343
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QS R L FR ++LV++D RG+D+ V+ V+N+D P KTYIHR GRT
Sbjct: 344 GQMSQSARLGALGKFRSKSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGRT 403
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKL 444
ARAG+ G + + + +V+ ++++
Sbjct: 404 ARAGKSGTAISFVTQYDVEIWQRI 427
>gi|359473682|ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Vitis vinifera]
Length = 436
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 191/429 (44%), Gaps = 103/429 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +DL + TGSGKT ++ALPI+Q L + + L A V+ PTR+LA+Q
Sbjct: 35 IQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLDTP-QVLFACVLSPTRELAIQ- 92
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
IAE F A+ +GL + VG
Sbjct: 93 --------------------IAEQ------------------FEALGSGIGLKCAVLVGG 114
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ L KRP I+V T G LMDH++ T+GF+L +
Sbjct: 115 VDHTQQAIALAKRP---------------------HIVVGTLGXLMDHLSNTKGFSLRTM 153
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YLV+DE DRLL + ++ + +L + + + T+L
Sbjct: 154 KYLVLDEADRLLNDDFEKAIDEILSVIPQERK-------TYL------------------ 188
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L +P+ + G ++Y + L+ +K
Sbjct: 189 -------------FSATMTKKVRKLQRACLRNPVKIEAG-SKYSTVDTLKQQYRFVPAKY 234
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YLV +L L +VFT + ++T L LL + G I I SG Q+ R L
Sbjct: 235 KECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAIPI---SGHMSQTKRLGAL 291
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G+ +L+ +D +RG+D+ V+ V+NYD P+ K YIHR GRTA AG+ G +L
Sbjct: 292 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISL 351
Query: 433 LHKDEVKRF 441
+++ E++ +
Sbjct: 352 VNQYELEWY 360
>gi|50547049|ref|XP_500994.1| YALI0B16896p [Yarrowia lipolytica]
gi|74660102|sp|Q6CEB8.1|DRS1_YARLI RecName: Full=ATP-dependent RNA helicase DRS1
gi|49646860|emb|CAG83247.1| YALI0B16896p [Yarrowia lipolytica CLIB122]
Length = 753
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 2 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
GIS+L + + TI L +DL + TGSGKT +Y +P+++ L + V +
Sbjct: 266 GISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAATK 325
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+L++QV AD + + Q+ S
Sbjct: 326 VVVLTPTRELSIQV----------------AD--VGKKLAQYVS---------------- 351
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
G+ GLAVG ++ + EL RP ++++ATPGR +
Sbjct: 352 ----GVRFGLAVGGLNLRVQEQELKTRP---------------------EVVIATPGRFI 386
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L E +Q L +L T LP
Sbjct: 387 DHVRNSPSFNVDDVEILVIDEADRMLEEGFQQELTEIL---------------TLLPKKR 431
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+L + SAT+ + L QL L P+ + +
Sbjct: 432 QTL-----------------------LFSATMNSSISSLIQLSLSRPVRVMINPPKQAAS 468
Query: 299 ERLESY-KLICESKLKPLYLVALLQSLG-EEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + ++ LKP L ++L+ + E++ I+F + E+ HRL +L G ++I
Sbjct: 469 GLVQEFVRIRKRDHLKPALLASILKKMDKEQRTIIFVARKETAHRLRIMLGLLG---VRI 525
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R +++ AF++ ++ +LV +D +RG+D+ + VVNYD P Y+HR
Sbjct: 526 GELHGALSQEQRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVVNYDMPQTHAVYLHR 585
Query: 417 AGRTARAGQLGRCFTLL 433
GRTARAG+ GR TL+
Sbjct: 586 VGRTARAGREGRSITLV 602
>gi|152013519|sp|A4QYM6.1|DRS1_MAGO7 RecName: Full=ATP-dependent RNA helicase DRS1
gi|440472865|gb|ELQ41697.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae Y34]
gi|440482949|gb|ELQ63394.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae P131]
Length = 790
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 205/462 (44%), Gaps = 111/462 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 273 VGFAKPTPIQ----SKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSR 328
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C + +A H+ + C
Sbjct: 329 VVILAPTRELAIQ---------CHAVATKLASHTDIKFC--------------------- 358
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + SEL RP D+++ATPGR +
Sbjct: 359 ---------LAVGGLSLKVQESELRLRP---------------------DVIIATPGRFI 388
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP
Sbjct: 389 DHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPK-- 431
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 295
S +T M+ SAT+T + L ++ L+ P+ L + +T
Sbjct: 432 -SRQT--------------------MLFSATMTSSVDNLIRVGLNKPVRLMVDSQKKTVV 470
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E K + YLV L ++L E+ I+F + H + FG L +
Sbjct: 471 TLTQEFVRLRPGREEK-RMGYLVYLCKNLYTERVIIFFRQKKIAHHARII---FGLLGLS 526
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R ++++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+H
Sbjct: 527 CAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVH 586
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
R GRTARAG+ G TL + + K K ++ I S
Sbjct: 587 RVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISS 628
>gi|440790460|gb|ELR11743.1| helicase conserved Cterminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 249
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
+IC KPL L+ LL+ ++ + FTSSVESTHRL LL G+ + EYS Q
Sbjct: 2 VICSLAYKPLVLLYLLEMFDFKRTLCFTSSVESTHRLYLLLTLMGQ--TGVAEYSSTLPQ 59
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
R++ ++ F +G I+++++SDAM+RG+D+E V NV+NYD P +IKTY+HR GRTARAG+
Sbjct: 60 RKRTQIIEKFAKGDIKIVIASDAMSRGLDIEDVENVINYDVPPFIKTYVHRVGRTARAGR 119
Query: 426 LGRCFTLLHKDEVKRFKKLLQKADNDS 452
G+ +TLL K E F+ +L+KA++ +
Sbjct: 120 QGKTYTLLLKSEAHHFRSMLKKAEHST 146
>gi|389630538|ref|XP_003712922.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
gi|351645254|gb|EHA53115.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
Length = 799
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 205/462 (44%), Gaps = 111/462 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 282 VGFAKPTPIQ----SKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSR 337
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C + +A H+ + C
Sbjct: 338 VVILAPTRELAIQ---------CHAVATKLASHTDIKFC--------------------- 367
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + SEL RP D+++ATPGR +
Sbjct: 368 ---------LAVGGLSLKVQESELRLRP---------------------DVIIATPGRFI 397
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP
Sbjct: 398 DHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPK-- 440
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 295
S +T M+ SAT+T + L ++ L+ P+ L + +T
Sbjct: 441 -SRQT--------------------MLFSATMTSSVDNLIRVGLNKPVRLMVDSQKKTVV 479
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E K + YLV L ++L E+ I+F + H + FG L +
Sbjct: 480 TLTQEFVRLRPGREEK-RMGYLVYLCKNLYTERVIIFFRQKKIAHHARII---FGLLGLS 535
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q R ++++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+H
Sbjct: 536 CAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVH 595
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
R GRTARAG+ G TL + + K K ++ I S
Sbjct: 596 RVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISS 637
>gi|212533429|ref|XP_002146871.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
gi|210072235|gb|EEA26324.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
Length = 826
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 193/441 (43%), Gaps = 119/441 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q ++ I L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 322 VGFTKPTPIQ----RKAIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRQRKVPTSR 377
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ +A ++ C
Sbjct: 378 VAILMPTRELAVQ---------CFNVATKLATYTDITFC--------------------- 407
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+G S+ ++ + L KRP DI++ATPGR +
Sbjct: 408 ---------QLIGGFSLREQENILKKRP---------------------DIIIATPGRFI 437
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 438 DHMRNSSSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 482
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 483 QT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQTAG 519
Query: 299 ERLESYKLICESKLKP-------LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
++ + +L+P L+ L Q + + I+F + HR+ + FG
Sbjct: 520 TLVQEF-----VRLRPGREDKRLASLIHLCQQVYTSRVIIFFRQKKEAHRVRVIFGLFG- 573
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 574 --LKAAELHGSMSQEQRIKSVEDFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQTHE 631
Query: 412 TYIHRAGRTARAGQLGRCFTL 432
Y+HR GRTARAG+ GR TL
Sbjct: 632 IYLHRVGRTARAGRSGRACTL 652
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 207/461 (44%), Gaps = 109/461 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+ S+ P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 332 VNFSNPTPIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 387
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 388 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 419
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 420 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 447
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P
Sbjct: 448 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPK-- 490
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
S +T M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 491 -SRQT--------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDAKKNTAV 529
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L + L + IVF + HR+ + FG L +K
Sbjct: 530 TLVQEFVRLRPGREDKRLGYLLYLCKELYTGRVIVFFRQKKEAHRVRII---FGLLGLKA 586
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FREGK L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 587 AELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 646
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
GRTARAG+ GR T+ + + K K ++ + I S
Sbjct: 647 VGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIAS 687
>gi|452821215|gb|EME28248.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 404
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 191/422 (45%), Gaps = 103/422 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ + TGSGKT ++ +PI+Q+L + + ALV+ PTR+LA Q
Sbjct: 44 RDIIGIAETGSGKTAAFVIPILQSLLDHN-KPYFALVISPTRELAFQ------------- 89
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
+K+ F + ++ L V + VG I + + +
Sbjct: 90 --------------------------IKEHFELLGRSIALRVVVIVGGVDIVSQAAAFAR 123
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+P ++VATPGRL+DH+ T+GF+L+ + +LV+DE DRLL
Sbjct: 124 KPH---------------------VIVATPGRLVDHLENTKGFSLQSIRFLVLDEADRLL 162
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
++ L ++ LP S
Sbjct: 163 SMDFEKELEKII---------------AALPKERQSF----------------------- 184
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
+ SAT+T+ KL ++ L +P+ L E +Y E L L +K K +LV L Q
Sbjct: 185 LFSATMTRKVQKLQRVSLTNPVKLQVSE-KYATVETLIQNYLFIPAKYKDCFLVFLCQEW 243
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
I+F + ST RL LL + G I G Q+ R + L F++GK VL+
Sbjct: 244 SGHPTIIFVDTQNSTLRLSLLLKNLGFGATAI---HGGMLQTKRLEALSKFKQGKKTVLI 300
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
++D +RG+D+ V+ +VNYD P ++K YIHR GRT+RAG+ GR L+ + +++ ++K+
Sbjct: 301 ATDLASRGLDIPSVDLIVNYDIPLHVKAYIHRVGRTSRAGRTGRAINLVTQYDIEAYQKV 360
Query: 445 LQ 446
Q
Sbjct: 361 EQ 362
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 108/420 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+D+ + TGSGKT ++ALPI+Q L+ ALV+ PTR+LA Q++
Sbjct: 82 KDVFGLAQTGSGKTAAFALPILQKLAENPYGVF-ALVLTPTRELAFQIS----------- 129
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
D F A+ V L + VG + + L++
Sbjct: 130 ----------------------------DQFKALGSEVNLRSTVVVGGMDMTTQAKALMQ 161
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF--TLEHLCYLVVDETDR 202
RP I++ATPGRL DH G YLV+DE DR
Sbjct: 162 RPH---------------------IVIATPGRLRDHFMNDPGIPDVFAKAKYLVLDEADR 200
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
L+ +++ L +V + S+ +
Sbjct: 201 LMDVGFESELRSVFETMPSNRQT------------------------------------- 223
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 322
++ SAT+T + L L L F E +K E L+ ++ + +K +YL+ ++
Sbjct: 224 -LLFSATMTSNLKALHDLSLDKAFFYQQYEG-FKTVEALQQQYILTPANVKDVYLMHIMS 281
Query: 323 SLGEEK---CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
+L E K I+F SS + H L +++ EL + ++ Q R +L F+ G+
Sbjct: 282 TLEERKIRSVIIFASSCRTCHLLSLMMS---ELEVDTTALHSMKTQQQRLASLSRFKSGQ 338
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
+ +L+++D +RG+D+ V+ V+NYD P + + Y+HR GRTARAG+ G +L+ + +V+
Sbjct: 339 VSILIATDVASRGLDIPTVDLVINYDIPRFTRDYVHRVGRTARAGRGGSAVSLITQYDVQ 398
>gi|340518289|gb|EGR48530.1| predicted protein [Trichoderma reesei QM6a]
Length = 787
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 196/437 (44%), Gaps = 111/437 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q +TI L +DL + TGSGKT ++ LPI++ L R + R
Sbjct: 269 VGFTKPTPIQA----KTIPIALMGKDLVGGAVTGSGKTAAFVLPILERLLYRPKKIPTTR 324
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C H++A + F
Sbjct: 325 VVILTPTRELAIQ---------C---------HAVATKLAAHTDIKFT------------ 354
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 355 ---------LAVGGLSLKAQEVELRLRP---------------------DVIIATPGRFI 384
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F+++ + LV+DE DR+L + + L +L T LP +
Sbjct: 385 DHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 429
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 295
+ M+ SAT+T ++L ++ L+ P+ + + +T
Sbjct: 430 QT-----------------------MLFSATMTSTVDRLIKVGLNKPVRVMVDSQKKTAG 466
Query: 296 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 355
L + + E K + YLV + ++L E+ I+F + HR + FG L
Sbjct: 467 TLTQEFVRLRPGREEK-RMGYLVHICKNLYTERVIIFFRQKKDAHRARII---FGLLGFS 522
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R ++++FR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+H
Sbjct: 523 CAELHGSMNQTQRIASVESFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQSVEIYVH 582
Query: 416 RAGRTARAGQLGRCFTL 432
R GRTARAG+ G TL
Sbjct: 583 RVGRTARAGRAGTSVTL 599
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 199/459 (43%), Gaps = 109/459 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G S P+Q + I + +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 298 VGFSEPTPIQ----NKAIPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRPKKVPTTR 353
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+ +PTR+LA+Q C N+ A F + F
Sbjct: 354 VAIFMPTRELAVQ---------CFNV---------ATKLASFTDITF------------- 382
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
L G S D+ + L RP D+++ATPGR +
Sbjct: 383 --------ALMAGGFSTKDQEAVLKTRP---------------------DVVIATPGRFI 413
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F +EHL LV+DE DR+L E +++ L +L T +P
Sbjct: 414 DHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEIL---------------TTIPK-- 456
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
S +T M+ SAT+T ++L ++ + P+ L ++ +
Sbjct: 457 -SRQT--------------------MLFSATMTSTVDRLIRIGMDKPVRLMVDAKKHTVK 495
Query: 299 ERLESYKLICESK--LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + + + K + YL+ + + E+ I+F + HR+ + G +K
Sbjct: 496 GLTQEFIRLRQGKEDRRLAYLMYICEKFYNERVIIFFRQKKEAHRVRVVFALCG---LKA 552
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + ++AFR GK L+++D +RG+D++ V+ V+NY+ P Y+HR
Sbjct: 553 SELHGNMSQEQRIQAVEAFRSGKSAYLLATDVASRGLDIKNVSTVINYEAPQTHDIYMHR 612
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 455
GRTARAG+ GR TL + + K K+ ++ A + +
Sbjct: 613 VGRTARAGREGRACTLAAEPDRKVVKQAVKAARDQGAKV 651
>gi|159131798|gb|EDP56911.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus A1163]
Length = 856
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 160/349 (45%), Gaps = 105/349 (30%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q A C+ C
Sbjct: 295 DLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELVKQAREA-CELC----- 348
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK- 144
A GL +G AVG +I DE L++
Sbjct: 349 ---------------------------------ATGSGLRIGSAVGNVAIKDEQRTLMRV 375
Query: 145 ----RPKL------------------------EAGICYDP-EDVLQELQSAVDILVATPG 175
P+L EAG +P +Q + +DIL+ TPG
Sbjct: 376 DQCYGPELSKQRQTVDLTGEDWTNFSLMNYLAEAGELSEPLPGYVQRAEPNIDILICTPG 435
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V++ S + P
Sbjct: 436 RLVDHLRYTKGFTLEHLQWLVIDEADRLLNESFQEWVDVVMK----------SLDARKAP 485
Query: 236 SAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------ 288
FGS K + G+ ++ PR K++LSAT+T+D +KL L L +P +
Sbjct: 486 KTFGSSGKFMAELGLPIQSRE---PR--KVILSATMTRDISKLNSLRLANPKLVIIGSAE 540
Query: 289 -------------TTGETRYKLPERLESYKL-ICESKLKPLYLVALLQS 323
TT + ++ LP L+ Y + + + KPLYL+ LLQS
Sbjct: 541 PTATEEAEHDGVPTTSDEQFTLPSTLKEYSVSVGDGSQKPLYLLQLLQS 589
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 329 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S ES RL L++ L ++ + S KTL A+R GKI ++V++D
Sbjct: 692 VLIFTKSSESASRLSRLISLLDPSLADRVGTIIKSNKSSASRKTLTAYRRGKISIIVATD 751
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
+RG+D+ + +VVNYD P + TY+HR GRTARAG+ G +TL+ E + F + K
Sbjct: 752 RASRGLDLVSLTHVVNYDVPPSVTTYVHRVGRTARAGKEGSAWTLVAHREGRWFVNEISK 811
Query: 448 ADN 450
+
Sbjct: 812 GSD 814
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 191/430 (44%), Gaps = 117/430 (27%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 70
+ ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 364 IQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 423
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q C N+ A + + F L V
Sbjct: 424 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 444
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 445 GGFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 483
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L LV+DE DR+L + + L +L T +P + +
Sbjct: 484 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---------- 518
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE- 309
M+ SAT+T +KL ++ L+ P+ L + S LI E
Sbjct: 519 -------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT------SMNLIQEF 559
Query: 310 SKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+L+P YL+ L + + + IVF + HR+ FG L +K E G
Sbjct: 560 VRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIA---FGLLGLKAAELHGS 616
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R ++++ FREGK+ L+++D RG+D++GV V+NY+ P + Y+HR GRTAR
Sbjct: 617 MSQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTAR 676
Query: 423 AGQLGRCFTL 432
AG+ GR T+
Sbjct: 677 AGRSGRACTI 686
>gi|429859431|gb|ELA34212.1| ATP-dependent RNA helicase drs1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 772
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 109/461 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G S P+Q +T+ L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 267 VGFSKPTPIQA----KTVPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSR 322
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++ PTR+LA+Q C H++A + + F
Sbjct: 323 VVILTPTRELAIQ---------C---------HAVATKLAAYTDIKFT------------ 352
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 353 ---------LAVGGLSLKQQEVELRLRP---------------------DVIIATPGRFI 382
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP
Sbjct: 383 DHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPK-- 425
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
S +T M+ SAT+T ++L ++ ++ P + + +
Sbjct: 426 -SRQT--------------------MLFSATMTSSVDRLVRVGMNKPARVMVDSQKKTVG 464
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YL+ + +++ E+ I+F + HR + FG L +
Sbjct: 465 TLVQEFIRLRPGREEKRMGYLIHICKTMHTERVIIFFRQKKEAHRARII---FGMLGMSC 521
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+HR
Sbjct: 522 AELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQKLEIYVHR 581
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
GRTARAG+ G TL + + K K ++ + I S
Sbjct: 582 VGRTARAGRSGVAVTLAAEPDRKVVKAAVKAGKSQGAKIMS 622
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 206/461 (44%), Gaps = 109/461 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+ S+ P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 300 VNFSNPTPIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 355
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 356 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 387
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 388 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 415
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 416 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 460
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 461 QT-----------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDAKKNTAV 497
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L + + + IVF + HR+ + FG L +K
Sbjct: 498 TLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRII---FGLLGLKA 554
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FREGK L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 555 AELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 614
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
GRTARAG+ GR T+ + + K K ++ + I S
Sbjct: 615 VGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIAS 655
>gi|322703237|gb|EFY94849.1| ATP-dependent RNA helicase drs-1 [Metarhizium anisopliae ARSEF 23]
Length = 944
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 201/466 (43%), Gaps = 119/466 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L + + R
Sbjct: 274 VGFTKPTPIQA----KTIPIALMGKDVVGGAVTGSGKTGAFFVPILERLLFRPKKIPTTR 329
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+LA+Q + DV +
Sbjct: 330 VVVLTPTRELAMQCH---------------------------------------DVGTKL 350
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A + LAVG S+ + EL RP DI+VATPGR +
Sbjct: 351 ARYTDIKFSLAVGGLSLKAQEVELRLRP---------------------DIIVATPGRFI 389
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP +
Sbjct: 390 DHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 434
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T ++L ++ L+ P+ L + +
Sbjct: 435 QT-----------------------MLFSATMTSTVDRLIRVGLNKPVRLMVDSQKKTVT 471
Query: 299 ERLESYKLICESKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
++ + +L+P YL L ++ E+ I+F + HR + FG
Sbjct: 472 TLVQEF-----VRLRPGREDKRMGYLAHLCKTFYHERVIIFFRQKKEAHRARII---FGL 523
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
L + E G QS R +++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 524 LGLSCAELHGSMNQSQRISSVEAFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQSLE 583
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
Y+HR GRTARAG+ G TL + + K K ++ I S
Sbjct: 584 IYVHRVGRTARAGRKGTAVTLAAEGDRKVVKAAVKAGKAQGAKITS 629
>gi|154282339|ref|XP_001541965.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410145|gb|EDN05533.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 826
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 155/327 (47%), Gaps = 91/327 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G + FP+Q AV E +G G DLCI++ TGSGKTL+YALP+V + + + LR
Sbjct: 260 GYTEAFPIQAAVL-ELLGTGKHRHSGDLCISATTGSGKTLAYALPLVAGIEHSSYPRLRG 318
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 319 LVVVPTRELVWQAREA-CELC--------------------------------------A 339
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK + +A ++ ++ + E
Sbjct: 340 TGTGLRIGTAVGTASLNEEQASLIKHEQFYSPRTDQIKNIQQMSADAWTSFNIQEYISEA 399
Query: 164 QSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+++ VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q
Sbjct: 400 ENSPSAFPNHVAIPSPSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQ 459
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLS 267
W+ V+ + NR + GV E G+K PRL K++LS
Sbjct: 460 EWVEVVIPAL---DRNRID-------------VNAKSGGVLQELGWKTC-KPRLQKIILS 502
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETR 294
AT+T+D +KL L L +P + + + R
Sbjct: 503 ATMTRDISKLQALRLRNPKLVVSDDPR 529
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 370
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
TL AFR GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAFRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 431 TLLHKDEVKRF 441
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 191/430 (44%), Gaps = 117/430 (27%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 70
+ ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 328 IQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 387
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q C N+ A + + F L V
Sbjct: 388 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 408
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 409 GGFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 447
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L LV+DE DR+L + + L +L T +P + +
Sbjct: 448 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---------- 482
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE- 309
M+ SAT+T +KL ++ L+ P+ L + S LI E
Sbjct: 483 -------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT------SMNLIQEF 523
Query: 310 SKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+L+P YL+ L + + + IVF + HR+ FG L +K E G
Sbjct: 524 VRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIA---FGLLGLKAAELHGS 580
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R ++++ FREGK+ L+++D RG+D++GV V+NY+ P + Y+HR GRTAR
Sbjct: 581 MSQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTAR 640
Query: 423 AGQLGRCFTL 432
AG+ GR T+
Sbjct: 641 AGRSGRACTI 650
>gi|162606504|ref|XP_001713282.1| DEAD box protein [Guillardia theta]
gi|12580748|emb|CAC27066.1| DEAD box protein [Guillardia theta]
Length = 386
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 188/438 (42%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F V TI L +DL + S TGSGKTL+Y LP++Q L + L ++++P+R
Sbjct: 22 FKKATKVQVYTIPHFLIGKDLLVYSQTGSGKTLAYILPLLQKLLYKKNNYL-PIIIVPSR 80
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+L Q+ F I+ + +
Sbjct: 81 ELVF---------------------------------------QISTTFETISCVFNIRI 101
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
L GI DP L + S DI+++TPGRL++ + T+
Sbjct: 102 A-------------------SLTGGI--DPNVQLVMISSNPDIIISTPGRLVEILKLTKN 140
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
++ LV+DE D+L+ ++ + + N+N+
Sbjct: 141 LEIKFCTDLVLDEADKLIHSDFKREINII---NSKTNKNK-------------------- 177
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
+L M+ SAT++ K+ + +P+ + + + P +++Y +
Sbjct: 178 -------------KL--MLFSATMSLGLEKIKFFKISNPVRIIINQNFFISPNLIQNY-I 221
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
C + K +YL+ L+ EEK I F + + T ++ LL F G Q+
Sbjct: 222 FCPFRYKEIYLLYLINEFYEEKLICFVETQKMTEKISILLKKFS---FDCYIIHGSLSQN 278
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R TL F GK ++LV++D +RG+D+ V+ ++NYD P Y+K YIHR GRT RAG+
Sbjct: 279 ERIDTLSKFTNGKKKILVATDLASRGLDICAVSLIINYDFPIYLKDYIHRTGRTGRAGRA 338
Query: 427 GRCFTLLHKDEVKRFKKL 444
GR +L+ + +++ F+K+
Sbjct: 339 GRAISLITQYDLRTFQKI 356
>gi|70996614|ref|XP_753062.1| DEAD/DEAH box helicase [Aspergillus fumigatus Af293]
gi|66850697|gb|EAL91024.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus Af293]
Length = 856
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 159/349 (45%), Gaps = 105/349 (30%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q A C+ C
Sbjct: 295 DLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELVKQAREA-CELC----- 348
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK- 144
A GL +G AVG +I DE L++
Sbjct: 349 ---------------------------------ATGSGLRIGSAVGNVAIKDEQRTLMRV 375
Query: 145 ----RPKL------------------------EAGICYDP-EDVLQELQSAVDILVATPG 175
P+L EAG +P +Q + +DIL+ TPG
Sbjct: 376 DQCYGPELSKQRQTVDLTGEDWTNFSLMNYLAEAGELSEPLPGYVQRAEPNIDILICTPG 435
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V+ S + P
Sbjct: 436 RLVDHLRYTKGFTLEHLQWLVIDEADRLLNESFQEWVDVVMN----------SLDARKAP 485
Query: 236 SAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------ 288
FGS K + G+ ++ PR K++LSAT+T+D +KL L L +P +
Sbjct: 486 KTFGSSGKFMAELGLPIQSRE---PR--KVILSATMTRDISKLNSLRLANPKLVIIGSAE 540
Query: 289 -------------TTGETRYKLPERLESYKL-ICESKLKPLYLVALLQS 323
TT + ++ LP L+ Y + + + KPLYL+ LLQS
Sbjct: 541 PTATEEAEHDGVPTTSDEQFTLPSTLKEYSVSVGDGSQKPLYLLQLLQS 589
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 329 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S ES RL L++ L ++ + S KTL A+R GKI ++V++D
Sbjct: 692 VLIFTKSSESASRLSRLISLLDPSLADRVGTIIKSNKSSASRKTLTAYRRGKISIIVATD 751
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
+RG+D+ + +VVNYD P + TY+HR GRTARAG+ G +TL+ E + F + K
Sbjct: 752 RASRGLDLVSLTHVVNYDVPPSVTTYVHRVGRTARAGKEGSAWTLVAHREGRWFVNEISK 811
Query: 448 ADN 450
+
Sbjct: 812 GSD 814
>gi|322692214|gb|EFY84155.1| dependent RNA helicase drs-1 [Metarhizium acridum CQMa 102]
Length = 780
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 201/466 (43%), Gaps = 119/466 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q +TI L +DL + TGSGKT ++ +PI++ L + + R
Sbjct: 271 VGFTKPTPIQA----KTIPIALMGKDLVGGAVTGSGKTGAFFVPILERLLFRPKKIPTTR 326
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+LA+Q C H + ++ + F
Sbjct: 327 VVVLTPTRELAMQ---------C---------HDVGTKLARYTDIKF------------- 355
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP DI+VATPGR +
Sbjct: 356 --------SLAVGGLSLKAQEVELRLRP---------------------DIIVATPGRFI 386
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + LV+DE DR+L + + L +L T LP +
Sbjct: 387 DHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTLPKSR 431
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T ++L + L+ P+ L + +
Sbjct: 432 QT-----------------------MLFSATMTSTVDRLIRAGLNKPVRLMVDSQKKTVT 468
Query: 299 ERLESYKLICESKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
++ + +L+P YL L ++ E+ I+F + HR + FG
Sbjct: 469 TLVQEF-----VRLRPGREDKRMGYLAYLCKTFYHERVIIFFRQKKEAHRARII---FGL 520
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
L + E G QS R +++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 521 LGLSCAELHGSMNQSQRISSVEAFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQSLE 580
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
Y+HR GRTARAG+ G TL + + K K ++ I S
Sbjct: 581 IYVHRVGRTARAGRKGTAVTLAAEGDRKVVKAAVKAGKAQGAKITS 626
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 206/461 (44%), Gaps = 109/461 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+ S+ P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 327 VNFSNPTPIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 382
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 383 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 414
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 415 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 442
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 443 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 487
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 488 QT-----------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDAKKNTAV 524
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L + + + IVF + HR+ + FG L +K
Sbjct: 525 TLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRII---FGLLGLKA 581
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FREGK L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 582 AELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHR 641
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 457
GRTARAG+ GR T+ + + K K ++ + I S
Sbjct: 642 VGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIAS 682
>gi|393910125|gb|EJD75750.1| DEAD box polypeptide 27 [Loa loa]
Length = 684
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 194/435 (44%), Gaps = 109/435 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCK 82
RDLC S TG+GKT ++ LP+++ L R + R +V+ PTR+LA
Sbjct: 179 RDLCACSATGTGKTAAFMLPVLERLLYRPQQKAMTRVVVLTPTRELA------------- 225
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
I ++ QF + + + L G + + + L
Sbjct: 226 -----IQTFQVSRQLSQF---------------------MRIDICLCAGGLDLKTQEAAL 259
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
+RP DI++ATPGRL+DH++ F+L ++ LV+DE DR
Sbjct: 260 RQRP---------------------DIVIATPGRLIDHLHNAPNFSLVNVEILVLDEADR 298
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
+L EA+ + ++ L C R
Sbjct: 299 MLDEAFADQMKEIIHL----------------------------CAQNRQ---------- 320
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALL 321
M+ SAT+T +LA + L +P+ L TG T L R E ++ + +VA L
Sbjct: 321 TMLFSATMTDQVEELAAVSLKNPVKLFITGNTETALNLRQEFVRIRESHETDRECIVAGL 380
Query: 322 QSLG-EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE-YSGL-QRQSVRSKTLKAFREG 378
+ + I+F + + RL +L G +K+ + +SGL QRQ V + L F++
Sbjct: 381 VTRNFPDHTIIFVKTKRTCRRLHIVLGLLG---VKVGQLHSGLTQRQRVEA--LFRFKKA 435
Query: 379 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
++ VLVS+D RG+DVEGV V+N D P+ +K Y+HR GRTARAG++GR +L+ + E
Sbjct: 436 ELDVLVSTDLAARGLDVEGVKTVINMDMPSTLKQYVHRVGRTARAGRVGRSISLVGESER 495
Query: 439 KRFKKLLQKADNDSC 453
K K+++ C
Sbjct: 496 KILKEIIASNKGGGC 510
>gi|325090745|gb|EGC44055.1| ATP-dependent RNA helicase DBP6 [Ajellomyces capsulatus H88]
Length = 826
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 155/327 (47%), Gaps = 91/327 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G + FP+Q AV E +G G DLCI++ TGSGKTL+YALP+V + + + LR
Sbjct: 260 GYTEAFPIQAAVL-ELLGTGKHRHSGDLCISAATGSGKTLAYALPLVAGIEHSSYPRLRG 318
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 319 LVVVPTRELVWQAREA-CELC--------------------------------------A 339
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK + +A ++ ++ + E
Sbjct: 340 TGRGLRIGTAVGTASLNEEQASLIKHEQFYSPSIDQIKNIQQMSADAWTSFNIQEYISEA 399
Query: 164 Q--------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+ S+VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q
Sbjct: 400 ESSHSAFPNHVAIPSSSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQ 459
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLS 267
W+ V+ + NR + GV E G+K PRL K++LS
Sbjct: 460 EWVEVVIPAL---DRNRID-------------VNAKSGGVLQELGWKTC-KPRLQKIILS 502
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETR 294
AT+T+D +KL L L +P + + + R
Sbjct: 503 ATMTRDISKLQVLRLRNPKLVVSDDPR 529
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 370
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
TL A+R GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAYRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 431 TLLHKDEVKRF 441
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|401840824|gb|EJT43489.1| DRS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 758
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 190/439 (43%), Gaps = 110/439 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 58
+G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R
Sbjct: 255 LGYVTPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTR 310
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+LPTR+LALQV A++ Q A
Sbjct: 311 VIVLLPTRELALQV---------------------ADVGKQI---------------ARF 334
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
P++ + GLAVG ++ + L RP DI++ATPGR +
Sbjct: 335 VPSI--TFGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFI 371
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DHI + F ++ + LV+DE DR+L E +Q L ++ L S +N
Sbjct: 372 DHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSSRQN------------- 418
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
++ SAT+ L L L P+ + +
Sbjct: 419 -------------------------LLFSATMNSKIKSLVSLSLKRPVRIMIDPPKKAAT 453
Query: 299 ERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
+ + + ++ LKP + L++ L +++ +VF + ES HRL ++ G L +
Sbjct: 454 KLTQEFVRIRKRDHLKPALIFNLIRKLDPMAQKRIVVFVARKESAHRLRIIM---GLLGM 510
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+
Sbjct: 511 SVGELHGSLTQEQRLDSVSKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSHEVYL 570
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTARAG+ GR T +
Sbjct: 571 HRVGRTARAGREGRSVTFV 589
>gi|240274402|gb|EER37918.1| ATP-dependent RNA helicase dbp6 [Ajellomyces capsulatus H143]
Length = 826
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 155/327 (47%), Gaps = 91/327 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G + FP+Q AV E +G G DLCI++ TGSGKTL+YALP+V + + + LR
Sbjct: 260 GYTEAFPIQAAVL-ELLGTGKHRHSGDLCISAATGSGKTLAYALPLVAGIEHSSYPRLRG 318
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 319 LVVVPTRELVWQAREA-CELC--------------------------------------A 339
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK + +A ++ ++ + E
Sbjct: 340 TGRGLRIGTAVGTASLNEEQASLIKHEQFYSPSIDQIKNIQQMSADAWTSFNIQEYISEA 399
Query: 164 Q--------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+ S+VDIL+ TPGRL+ HI +T+GFTL HL +LV+DE DRLL E++Q
Sbjct: 400 ESSHSAFPNHVAIPSSSVDILICTPGRLVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQ 459
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLS 267
W+ V+ + NR + GV E G+K PRL K++LS
Sbjct: 460 EWVEVVIPAL---DRNRID-------------VNAKSGGVLQELGWKTC-KPRLQKIILS 502
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETR 294
AT+T+D +KL L L +P + + + R
Sbjct: 503 ATMTRDISKLQVLRLRNPKLVVSDDPR 529
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 370
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
TL A+R GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAYRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 431 TLLHKDEVKRF 441
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|242778101|ref|XP_002479171.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722790|gb|EED22208.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 833
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 193/441 (43%), Gaps = 119/441 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q ++ I L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 329 VGFTKPTPIQ----RKAIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSR 384
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++PTR+LA+Q C N+ A + + F L
Sbjct: 385 VAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL---------- 416
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+G S+ ++ + L KRP DI++ATPGR +
Sbjct: 417 -----------IGGFSLREQENVLKKRP---------------------DIIIATPGRFI 444
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 445 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 489
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 490 QT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQTAG 526
Query: 299 ERLESYKLICESKLKP-------LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
++ + +L+P L+ L Q + + I+F + HR+ + FG
Sbjct: 527 TLVQEF-----VRLRPGREDKRLASLIHLCQQVYAARVIIFFRQKKEAHRVRVIFGLFG- 580
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 581 --LKAAELHGSMSQEQRIKSVEDFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQTHE 638
Query: 412 TYIHRAGRTARAGQLGRCFTL 432
Y+HR GRTARAG+ GR TL
Sbjct: 639 IYLHRVGRTARAGRSGRACTL 659
>gi|300781219|ref|ZP_07091073.1| ATP-dependent RNA helicase RhlE [Corynebacterium genitalium ATCC
33030]
gi|300532926|gb|EFK53987.1| ATP-dependent RNA helicase RhlE [Corynebacterium genitalium ATCC
33030]
Length = 408
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 198/463 (42%), Gaps = 112/463 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRC--LR 58
GI FP+Q A P + + RD+ PTGSGKT ++ LP++ L+ + R
Sbjct: 21 GIEEPFPIQEAAI-----PAVLDGRDVLGRGPTGSGKTFAFGLPMLALLAGSPSKPGHPR 75
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV+ PTR+LA Q+ Q D AA
Sbjct: 76 GLVLAPTRELAAQIR------------------------------------QRLDDPAA- 98
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A GL V VG +I + I + L + VD+LVATPGR
Sbjct: 99 --AAGLRVLEVVGGVNINNHI---------------------RSLAAPVDLLVATPGRAQ 135
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
D IN + + + + +DE D++ A +LP V +L + EN
Sbjct: 136 DLINQGK-LSFDSVAVTAIDEADQM---ADMGFLPQVRKLVDATPENGQ----------- 180
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+++ SATL D KL Q L P+ +T + +
Sbjct: 181 ------------------------RLLFSATLDGDVEKLVQRYLTDPVTHSTAPAQAAV- 215
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+ ++ Y+L+ S+ +V L+ + E K I+F + R L G I+ +
Sbjct: 216 DTMQHYQLLVGSRESRNEIVPLIAAR-EGKTIMFMRTKHGVDRQVKKLRRVG---IEAQP 271
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G + Q R++ ++ F +G + VLV++D RG+D+ V+ VV+ D PA K+Y+HRAG
Sbjct: 272 LHGDKGQGARTRAIEGFTDGSVPVLVATDIAARGIDISDVSLVVHIDPPAEHKSYLHRAG 331
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSS 461
RTARAG G TL+ ++ K +LL+KA D+ + P S
Sbjct: 332 RTARAGTSGTVVTLVMDEQRKEVDQLLRKAGVDAQKVRVTPMS 374
>gi|19552665|ref|NP_600667.1| helicase [Corynebacterium glutamicum ATCC 13032]
gi|62390333|ref|YP_225735.1| superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC
13032]
gi|145295583|ref|YP_001138404.1| hypothetical protein cgR_1510 [Corynebacterium glutamicum R]
gi|417970798|ref|ZP_12611729.1| hypothetical protein CgS9114_07220 [Corynebacterium glutamicum
S9114]
gi|21324218|dbj|BAB98843.1| Superfamily II DNA and RNA helicases [Corynebacterium glutamicum
ATCC 13032]
gi|41325670|emb|CAF21459.1| Superfamily II DNA or RNA helicase [Corynebacterium glutamicum ATCC
13032]
gi|140845503|dbj|BAF54502.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045094|gb|EGV40768.1| hypothetical protein CgS9114_07220 [Corynebacterium glutamicum
S9114]
gi|385143575|emb|CCH24614.1| putative helicase [Corynebacterium glutamicum K051]
Length = 448
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 187/450 (41%), Gaps = 111/450 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL---R 58
GI+ FP+Q A + L +D+ PTGSGKT ++ LP++ L+ R
Sbjct: 21 GITEAFPIQEAAIPDA----LAGKDVLGRGPTGSGKTFTFGLPMITRLARSGASKPGRPR 76
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+LA Q V++
Sbjct: 77 GLVLVPTRELAAQ---------------------------------------VRERLDDP 97
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A +GL V VG +I I+ L + VDILVATPGR
Sbjct: 98 ARVMGLRVLEVVGGVNINRNITALA---------------------TPVDILVATPGRAQ 136
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
D IN + +L + +DE D++ + + ++ LT + +
Sbjct: 137 DLINQKK-LSLADVSVTALDEADQMADMGFLPQVKKLMDLTPKNGQ-------------- 181
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+++ SATL D +KL LH+P+ +T + +
Sbjct: 182 ------------------------RLLFSATLDGDVSKLVDRYLHNPITHSTAPVQAAV- 216
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+ +E Y+L+ + P V L + E K I+F + R L G + I
Sbjct: 217 DTMEHYRLLVGGR-DPRNSVVLSIAAREGKTIMFMRTKHGVDRQVKKLRRVGVNAVGIHG 275
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G QS R+ L F +G I VLV++D RG+DV+ V+ VV+ D PA K Y+HRAG
Sbjct: 276 DKG---QSTRTNALAGFADGSIPVLVATDIAARGIDVDDVSLVVHVDPPAEHKAYLHRAG 332
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RTARAG G TL+ +++K ++L QKA
Sbjct: 333 RTARAGTSGTVVTLVMDEQIKEVRELFQKA 362
>gi|418246876|ref|ZP_12873265.1| hypothetical protein KIQ_15363 [Corynebacterium glutamicum ATCC
14067]
gi|354509072|gb|EHE82012.1| hypothetical protein KIQ_15363 [Corynebacterium glutamicum ATCC
14067]
Length = 448
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 187/450 (41%), Gaps = 111/450 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL---R 58
GI+ FP+Q A + L +D+ PTGSGKT ++ LP++ L+ R
Sbjct: 21 GITEAFPIQEAAIPDA----LAGKDVLGRGPTGSGKTFTFGLPMITRLARSGASKPGRPR 76
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV++PTR+LA Q V++
Sbjct: 77 GLVLVPTRELAAQ---------------------------------------VRERLDDP 97
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A +GL V VG +I I+ L + VDILVATPGR
Sbjct: 98 ARVMGLRVLEVVGGVNINRNITALA---------------------TPVDILVATPGRAQ 136
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
D IN + +L + +DE D++ + + ++ LT + +
Sbjct: 137 DLINQKK-LSLADVSVTALDEADQMADMGFLPQVKKLMDLTPKNGQ-------------- 181
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+++ SATL D +KL LH+P+ +T + +
Sbjct: 182 ------------------------RLLFSATLDGDVSKLVDRYLHNPITHSTAPVQAAV- 216
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+ +E Y+L+ + P V L + E K I+F + R L G + I
Sbjct: 217 DTMEHYRLLVGGR-DPRNSVVLSIAAREGKTIMFMRTKHGVDRQVKKLRRVGVNAVGIHG 275
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G QS R+ L F +G I VLV++D RG+DV+ V+ VV+ D PA K Y+HRAG
Sbjct: 276 DKG---QSTRTNALAGFADGSIPVLVATDIAARGIDVDDVSLVVHVDPPAEHKAYLHRAG 332
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RTARAG G TL+ +++K ++L QKA
Sbjct: 333 RTARAGTSGTVVTLVMDEQIKEVRELFQKA 362
>gi|145493178|ref|XP_001432585.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399698|emb|CAK65188.1| unnamed protein product [Paramecium tetraurelia]
Length = 564
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 189/428 (44%), Gaps = 106/428 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSN-RAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
+D+ +S TGSGKT ++ LPI+Q N + ++ +AL++LPTR+LALQ
Sbjct: 154 KDVLASSCTGSGKTAAFLLPIMQRFGNLKNLQYSKALIILPTRELALQ------------ 201
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
C ++F + + L +G I + +EL
Sbjct: 202 -------------CF--------------EMFEKLNKYANCTAALVIGAVPIQQQETELR 234
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
K P DI++ATPGR +D + + ++++ LV DE DRL
Sbjct: 235 KYP---------------------DIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRL 273
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
+ ++ + +LQ T D +
Sbjct: 274 MEMGFEKEIRQILQATSKDRQT-------------------------------------- 295
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPERLESYKLICESKLKPLYLVAL 320
+++SATL +L+ L L++P+ + G Y L + L + +S + L+ L
Sbjct: 296 VLISATLNATVKQLSLLALNNPIKVNVDFVGGLAYGLKQYLLRIRSNQDSD-REATLITL 354
Query: 321 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
L++ +EK I+F + HRL +L G L + E G Q R + + F+EGK
Sbjct: 355 LKTKFKEKTIIFVKTKHDCHRLAIVL---GFLDMSSCELHGNLSQQQRIQAYEDFKEGKF 411
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
Q L+++D RG+D+ V V+NY+ P + YIHR GRTAR G G T+ ++EV +
Sbjct: 412 QFLLATDLAARGLDLTDVKAVINYEIPYEVTRYIHRVGRTARIGAQGISVTICLENEVVK 471
Query: 441 FKKLLQKA 448
FKK+++++
Sbjct: 472 FKKMIRQS 479
>gi|315043800|ref|XP_003171276.1| ATP-dependent RNA helicase dbp6 [Arthroderma gypseum CBS 118893]
gi|311345065|gb|EFR04268.1| ATP-dependent RNA helicase dbp6 [Arthroderma gypseum CBS 118893]
Length = 813
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 169/373 (45%), Gaps = 108/373 (28%)
Query: 2 GISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G + PVQ AV GP + D+C+++ TGSGKTL+Y LP+ L V LRA+
Sbjct: 237 GYTEALPVQSAVIPLLAKGPTRYTGDICVSAATGSGKTLAYVLPLFAGLKRLPVAKLRAV 296
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+++PTR+L QV A C+ C A
Sbjct: 297 IIVPTRELVKQVRDA-CELC--------------------------------------AS 317
Query: 121 AVGLSVGLAVGQSSIADEISELIK-----RPKLEAGIC----------------YDPE-- 157
GL +G AVG +++ DE ++++K RP+ C Y E
Sbjct: 318 GSGLRIGTAVGSTALKDEQTQIMKQTRMYRPESTGSQCDREMTADEWASFSLTDYIAEAE 377
Query: 158 -------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 210
D + E VDIL+ TPGRL+DHI +T+GF L+ L +L++DE DRLL E++Q
Sbjct: 378 EYSKTLPDHVIEWSPCVDILICTPGRLVDHIRSTKGFILDSLEWLIIDEADRLLNESFQE 437
Query: 211 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP----RLVKMVL 266
W+ TVL + ++ + G L+ + +GF +P L K++L
Sbjct: 438 WVETVLPALDTKEQS----------TTTGPLQQL-----TKGFS---FPLGSRNLQKVIL 479
Query: 267 SATLTQDPNKLAQLDLHHPLFLT-----------TGET----RYKLPERL-ESYKLICES 310
SAT+T+D KL L LH+P + GET LP L ES + +
Sbjct: 480 SATMTRDITKLNSLRLHNPKLVVVDGADMNDATRNGETGPDSNITLPSLLDESLIPVGDG 539
Query: 311 KLKPLYLVALLQS 323
KPLYL+ LLQ+
Sbjct: 540 SEKPLYLLKLLQT 552
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S E+ RL LL + L K+ + S + + F++GKIQ++V++D
Sbjct: 636 VLIFTKSSEAASRLSRLLALMYPYLDGKVGTLIKSNKSSTSRRAISGFQKGKIQIIVATD 695
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D+ ++N++NYD P + TY+HR GRTARAG+ G ++L+ E + F
Sbjct: 696 RASRGLDLPLLDNIINYDIPNSLTTYVHRVGRTARAGRPGSAWSLVTHSEGRWF 749
>gi|342889281|gb|EGU88436.1| hypothetical protein FOXB_01039 [Fusarium oxysporum Fo5176]
Length = 797
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 214/473 (45%), Gaps = 111/473 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G S P+Q ++I L +DL + TGSGKT ++ +PI++ L R + R
Sbjct: 276 VGFSKPTPIQA----KSIPIALMGKDLVGGAVTGSGKTGAFIVPILERLLYRPKKIPTTR 331
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+LA+Q C H++A F + F
Sbjct: 332 VVVLTPTRELAIQ---------C---------HAVATKLAAFTDIKFT------------ 361
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + EL RP D+++ATPGR +
Sbjct: 362 ---------LAVGGLSLKAQEVELKLRP---------------------DVIIATPGRFI 391
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F+++ + +V+DE DR+L + + L +L T LP
Sbjct: 392 DHMRNSASFSVDTVEIMVLDEADRMLEDGFADELNEIL---------------TTLPK-- 434
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
S +T M+ SAT+T ++L ++ L+ P + + +
Sbjct: 435 -SRQT--------------------MLFSATMTSTVDRLIKIGLNKPARVMVDSQKKTVT 473
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YL + ++L +E+ I+F + HR + FG L +
Sbjct: 474 TLVQEFVRLRPGREEKRMGYLAHVCKNLYKERVIIFFRQKKEAHRARII---FGLLGLSC 530
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+HR
Sbjct: 531 AELHGSMNQTQRISSVEDFRDGKVAYLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHR 590
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
GRTARAG+ G TL + + K K ++ I S I ++ +++L+
Sbjct: 591 VGRTARAGRKGTALTLASETDRKVVKAAVKAGKAQGAKIVSRQIEAAEVDALQ 643
>gi|365759503|gb|EHN01286.1| Drs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 737
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 187/432 (43%), Gaps = 110/432 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPT 65
P+Q A TI L +D+ + TGSGKT ++ +PI++ L + + R +V+LPT
Sbjct: 241 PIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPT 296
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+LALQV A++ Q A P++ +
Sbjct: 297 RELALQV---------------------ADVGKQI---------------ARFVPSI--T 318
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
GLAVG ++ + L RP DI++ATPGR +DHI +
Sbjct: 319 FGLAVGGLNLRQQEQMLKSRP---------------------DIVIATPGRFIDHIRNSA 357
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
F ++ + LV+DE DR+L E +Q L ++ L S +N
Sbjct: 358 SFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSSRQN-------------------- 397
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY- 304
++ SAT+ L L L P+ + + + + +
Sbjct: 398 ------------------LLFSATMNSKIKSLVSLSLKRPVRIMIDPPKKAATKLTQEFV 439
Query: 305 KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
++ LKP + L++ L +++ +VF + ES HRL ++ G L + + E G
Sbjct: 440 RIRKRDHLKPALIFNLIRKLDPMAQKRIVVFVARKESAHRLRIIM---GLLGMSVGELHG 496
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD P + Y+HR GRTA
Sbjct: 497 SLTQEQRLDSVSKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSHEVYLHRVGRTA 556
Query: 422 RAGQLGRCFTLL 433
RAG+ GR T +
Sbjct: 557 RAGREGRSVTFV 568
>gi|328772256|gb|EGF82294.1| hypothetical protein BATDEDRAFT_34342 [Batrachochytrium
dendrobatidis JAM81]
Length = 741
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 197/445 (44%), Gaps = 108/445 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCK 82
RD+C ++ TGSGKT ++ +PIV+ L R R L+++PTR+L +Q C+
Sbjct: 225 RDICGSAVTGSGKTAAFIIPIVERLLFRPKNDATTRVLILVPTRELGVQ---------CQ 275
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
++ IS+ + D+ S L VG + +EL
Sbjct: 276 SVA--------------------ISISKFTDI----------STCLCVGGLPTKTQEAEL 305
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
RP DI++ATPGRL+DHI+ + F L+ + LV+DE DR
Sbjct: 306 RLRP---------------------DIIIATPGRLIDHIHNSPSFFLDAIDILVIDEADR 344
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
+L + + A L +++ T P R
Sbjct: 345 ILDDGFDAELNEIIKHT-------------------------------------PRTRQT 367
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL-ESYKLICESK--LKPLYLVA 319
M+ SAT+T + + L +L L+ P+ L + KL RL + + + K +P L A
Sbjct: 368 -MLFSATMTDNVDDLIKLSLNRPVRLFVDQN-TKLTNRLVQEFIRVRGHKETSRPAILAA 425
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
L + IVF S + H + + FG L +K E G Q R + L+ FRE K
Sbjct: 426 LCSRTYTSETIVFFRSKAAAHHMKII---FGFLGLKAAELHGNLTQLQRLEALELFREKK 482
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
+ L+++D +RG+D+ GV V+NYD P Y+HR GRTAR GR +L+ + + +
Sbjct: 483 VGFLLATDLASRGLDISGVKTVINYDMPKSYSIYVHRVGRTARGDLAGRAVSLVGEAD-R 541
Query: 440 RFKKLLQKADNDSCPIHSIPSSLIE 464
K+ K D+ +P++++E
Sbjct: 542 ALLKMAIKNTRDAVKNRIVPANVVE 566
>gi|261191654|ref|XP_002622235.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
gi|239590001|gb|EEQ72644.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
Length = 847
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 153/321 (47%), Gaps = 87/321 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V + + LR
Sbjct: 279 GYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVAGIEQLPLARLRG 337
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 338 LVVVPTRELVKQARDA-CELC--------------------------------------A 358
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK +L E+ ++ ++ + E+
Sbjct: 359 TRTGLRIGTAVGTASLKEEQALLIKHDQLYSPSNRRIGNGHQMIAESWASFNFQEYITEV 418
Query: 164 QSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+ + +DIL+ TPGRL+DHI +T+GF+LEHL +LV+DE DRLL E++Q
Sbjct: 419 ERSHSAFPDHVTTPSPNIDILICTPGRLVDHIRSTKGFSLEHLEWLVIDEADRLLNESFQ 478
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
W+ V+ + + LP + C PRL K++LSAT
Sbjct: 479 EWVEVVIPALERVRVDVAGKSGRILPDLGWQI-----C----------KPRLRKIILSAT 523
Query: 270 LTQDPNKLAQLDLHHPLFLTT 290
+T+D KL L L +P ++T
Sbjct: 524 MTRDIAKLNSLRLQNPKLVST 544
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 329 CIVFTSSVESTHRLCTLL--------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+VFT S ES RL LL N G L + + S KT+ A+R GK+
Sbjct: 674 VLVFTKSSESASRLARLLVLMHPPFANRIGTL-------AKSSKSSTSRKTISAYRNGKL 726
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
+++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +TL+ E +
Sbjct: 727 SIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAWTLVAHREGRW 786
Query: 441 FKKLLQKADNDSCP 454
F + K CP
Sbjct: 787 FANEIVK-----CP 795
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 101/421 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I L RD+ + TGSGKT ++ LPI+Q L + + L L++ PTR+LA Q+
Sbjct: 115 IQAQAIPLALQGRDVIGLAETGSGKTAAFVLPILQALLEKQ-QSLFGLILAPTRELAYQI 173
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q D+L I + + VG
Sbjct: 174 ------------------------AQQVDALGSI---------------INVKCATLVGG 194
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL+DH+ T+GF+L+HL
Sbjct: 195 MDMVPQAIALSKKPH---------------------IIVATPGRLLDHLENTKGFSLKHL 233
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
Y+V+DE DRLL + L +L++ + + +
Sbjct: 234 KYMVLDEADRLLDLDFGPVLDKILKVLPREGRHTY------------------------- 268
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L +P+ ++ + +++ L + K
Sbjct: 269 ------------LFSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKY 316
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K LYL+ LL I+F+ +V T R+ LL G I + G QS R L
Sbjct: 317 KDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPLH---GQLSQSARLGAL 373
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +LV++D RG+D+ V+ VVN+D P+ +TY+HR GRTARAG+ G+ +
Sbjct: 374 NKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVGRTARAGKSGKAVSF 433
Query: 433 L 433
+
Sbjct: 434 V 434
>gi|403220736|dbj|BAM38869.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 499
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 205/485 (42%), Gaps = 107/485 (22%)
Query: 3 ISSLFPVQVAVWQETIGP-----------GLFERDLCINSPTGSGKTLSYALPIVQTLSN 51
I+ FP+Q E I P +F D I +PTG GKTL Y LP++ + N
Sbjct: 52 ITEFFPIQ-----EKIIPLLLNNTYKDRLSVFSCDFIITAPTGQGKTLCYVLPLINNILN 106
Query: 52 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
L AL++ P+R+L Q+ +F D S P
Sbjct: 107 LKENRLSALIIAPSRELVKQIYE---------VFSWFID----------------SDPLT 141
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
D+ GL V L G S K I DP I +
Sbjct: 142 YDL-----KGNGLKVRLFYGDKSFI----------KYHRTILNDPPH----------IAI 176
Query: 172 ATPGRLMDH-INATRGF---TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 227
TPG L+++ I+ + T HL ++V++E D +L + W+ V+ L + +
Sbjct: 177 TTPGILVEYFIDFDKNHFYNTFSHLKWIVIEEVDLMLNQPLFEWVNVVVDLVNTLKRSE- 235
Query: 228 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
S+ + LP K+++SAT+ +++ LDL+ P+
Sbjct: 236 SNQCSGLPQ--------------------------KILVSATVPLKSHEIDTLDLNRPIL 269
Query: 288 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLC 343
E +KLP+ L + + +PL L+ LL L EK +VF S V++ H +
Sbjct: 270 FRLDEIIFKLPKNLTQNCISTSKRSRPLVLIKLLNFLFFEKESGNVLVFFSKVDTCHTIA 329
Query: 344 TLLN---HFGELRIKIKEYSGLQRQSVRSKTLKAFR-EGKIQVLVSSDAMTRGMDVEGVN 399
LL H + K E++ Q R++ + ++ EGKI L+ SD +RG+D+
Sbjct: 330 RLLQIYVHQTKSNFKAMEFNSKLSQKDRNRVMNTYKKEGKI-CLLCSDVASRGIDLPNTT 388
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI- 458
VV+YD P + TYIHRAGRTARA G + + K + + + + K + I++I
Sbjct: 389 VVVSYDVPIRLSTYIHRAGRTARANNEGNLYVFVSKKDQTNYNRFMNKLKVERSEINNID 448
Query: 459 PSSLI 463
P+ L+
Sbjct: 449 PNGLM 453
>gi|323455700|gb|EGB11568.1| hypothetical protein AURANDRAFT_2416, partial [Aureococcus
anophagefferens]
Length = 435
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 189/446 (42%), Gaps = 109/446 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I L RD+ + TGSGKT ++ LPI+ L + R L + + PTR+LA+Q+
Sbjct: 22 IQKAAIPVALSGRDVIGLAETGSGKTGAFGLPILHKLLEKPSR-LFGVALAPTRELAVQI 80
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ +VF A+ A+GL VG
Sbjct: 81 H---------------------------------------EVFDALGAAIGLRCVCVVGG 101
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
IA + L K P ++VATPGRL+DH+ T+GF+L
Sbjct: 102 VEIAAQALALAKLPH---------------------VVVATPGRLVDHLENTKGFSLRTC 140
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE DR+L ++ L ++ G++ RC
Sbjct: 141 KCLVMDEADRMLSMDFEKELDAIV----------------------GAIPREGRC----- 173
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
M+ SAT+T KL + L+ P+ + + ++ +P +L+ L +K
Sbjct: 174 ----------SMLFSATMTSKVAKLQRASLYKPVKVAVND-KFAMPRQLDQRYLFVPAKH 222
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K YL A+L + +VF ++ R LL + G G Q R L
Sbjct: 223 KECYLAAVLDARRGATALVFCATCAGATRATLLLRNLG---FDAACLHGQMAQPKRLGAL 279
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ G +LV++D RG+D+ V+ V+NYD P + K Y+HR GRTARAG+ G
Sbjct: 280 HKFKAGAATILVATDVAARGLDIPAVDLVLNYDVPTHGKEYVHRVGRTARAGRKGSAIAF 339
Query: 433 LHKDEVKRFKKL-------LQKADND 451
+ + +V+ +++L L KAD D
Sbjct: 340 VTQYDVELYQRLEHLIGVKLPKADVD 365
>gi|115492615|ref|XP_001210935.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
gi|121742543|sp|Q0CZN5.1|DRS1_ASPTN RecName: Full=ATP-dependent RNA helicase drs1
gi|114197795|gb|EAU39495.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
Length = 821
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 194/435 (44%), Gaps = 121/435 (27%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPT 65
P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PT
Sbjct: 329 PIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPT 384
Query: 66 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 125
R+LA+Q C N+ A + + F L
Sbjct: 385 RELAVQ---------CYNV---------ATKLATYTDITFCQL----------------- 409
Query: 126 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 185
VG S+ ++ + L KRP D+++ATPGR +DH+ +
Sbjct: 410 ----VGGFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSA 444
Query: 186 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
FT++ L LV+DE DR+L + + L +L T +P + +
Sbjct: 445 SFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT----- 484
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 305
M+ SAT+T +KL ++ L+ P+ L + S
Sbjct: 485 ------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDSKKNT------SLT 520
Query: 306 LICE-SKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
L+ E +L+P YL+ L + + + IVF HR+ + FG L +K
Sbjct: 521 LVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKREAHRVRIV---FGLLGLKAA 577
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 578 ELHGSMSQEQRIKSVENFRDGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 637
Query: 418 GRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 638 GRTARAGRSGRACTI 652
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 200/436 (45%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
+G + P+Q ++ I L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 322 VGFTDPTPIQ----RKAIPVALLGKDIVGSAVTGSGKTAAFIVPILERLLFRPRKVPTSR 377
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
++++PTR+LA+Q C N+ +A F + F L
Sbjct: 378 VVILMPTRELAVQ---------CYNVSVKLA---------TFTDVTFCQL---------- 409
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 410 -----------VGGFSLREQENVLKKRP---------------------DVIIATPGRFI 437
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + FT++ L LV+DE DR+L + + L +L T +P +
Sbjct: 438 DHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSR 482
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ ++ P+ L + +
Sbjct: 483 QT-----------------------MLFSATMTDSIDKLIRVGMNRPVRLMVDSKKNTVS 519
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K L YL+ L + + ++ I+F + HR+ + + G +K
Sbjct: 520 TLVQEFVRLRPGREDKRLGYLLHLCKEIYSKRVIIFFRQKKEAHRVRIIFSLLG---LKA 576
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR
Sbjct: 577 AELHGSLSQEQRIKSVENFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHR 636
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ GR T+
Sbjct: 637 VGRTARAGRSGRACTI 652
>gi|224369411|ref|YP_002603575.1| protein RhlE2 [Desulfobacterium autotrophicum HRM2]
gi|223692128|gb|ACN15411.1| RhlE2 [Desulfobacterium autotrophicum HRM2]
Length = 460
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 198/466 (42%), Gaps = 111/466 (23%)
Query: 8 PVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLP 64
P+Q+ V P + +D+ + TG+GKT ++ALPIV+ L+ R RALV+ P
Sbjct: 26 PIQIRVI-----PAILNGQDILARAQTGTGKTDAFALPIVEILARGKAHRRHPRALVLTP 80
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LAL QV + A A V L
Sbjct: 81 TRELAL---------------------------------------QVGESIKAYARRVSL 101
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ G G+ +P+ + L+ VDILVATPGRL+D
Sbjct: 102 RCTVVYG-------------------GVNVNPQ--IDRLKRGVDILVATPGRLLDLAAFN 140
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
R L + +LV DE DR+L + + +L+L D
Sbjct: 141 RDVKLSKIEFLVFDEADRMLDLGFSDEISQILELVPQD---------------------- 178
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR M+ SAT T+ LA L P + ++
Sbjct: 179 RRT----------------MLFSATYTRQIRDLADKMLKTPEQIEVTPNTTVAESIVQKV 222
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
L+ +S + L L+ L+ + +VFT + ++L L +++I G +
Sbjct: 223 HLVEKSNKREL-LIHLITRSDWRQVLVFTRTKHGANKLAERL---AQVKISAAALHGNKS 278
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
QS R++TL+ F+ G+I++LV++D RG+D+ G+ +VVNYD P+ + Y+HR GRT RAG
Sbjct: 279 QSFRTRTLQEFKNGEIRILVATDVAARGLDITGLPHVVNYDMPSVAEDYVHRIGRTGRAG 338
Query: 425 QLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
G +L+ K+E K F K ++ P+ ++ ++S P +
Sbjct: 339 IQGVAVSLVSKEE-KVFLKSVESLLEQKIPVETVKGYTVDSAVPSF 383
>gi|406989076|gb|EKE08894.1| hypothetical protein ACD_16C00239G0015 [uncultured bacterium]
Length = 413
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 197/453 (43%), Gaps = 112/453 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLS-NRA-VRCL 57
+G +S P+Q E P L E RD+ + TGSGKT S+ LP++ L+ RA R
Sbjct: 19 VGYTSPTPIQ-----EKAVPLLLEGRDIIALAQTGSGKTASFILPLLDLLTRGRAKARMP 73
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
R+L++ PTR+LA QV D FA
Sbjct: 74 RSLIMEPTRELAAQV---------------------------------------ADDFAI 94
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+V L +G S D+ +L+K VD+L+ATPGRL
Sbjct: 95 YGKHYTFTVALLIGGESFGDQEKKLLK---------------------GVDVLIATPGRL 133
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+D + + L + LV+DE DR+L ++P + ++ ++ LP
Sbjct: 134 LDLYDRGK-ILLNDVKMLVIDEADRMLD---MGFIPDIERI------------ASLLP-- 175
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
PR + SAT+ + KL Q L +P +T T K
Sbjct: 176 ---------------------PRQTAL-FSATMPEPIRKLTQQFLKNPEEITISATS-KA 212
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
P +E + + K K L +LL++ + +VF + + + +G K+
Sbjct: 213 PSLIEQFIVRAPEKEKRDVLRSLLKAEDLHQVLVFCNRKREVDIVYNSMKRYG---FKVG 269
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
G QSVR+KTLK F+EGKI +L++SD RG+D+E + V+N+ P + YIHR
Sbjct: 270 ALHGDITQSVRNKTLKDFKEGKIDLLIASDVAARGLDIEDLPGVINFHVPTTPEDYIHRI 329
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
GRT RAG+ G+ FTL+ E K +L+ + +
Sbjct: 330 GRTGRAGKEGKAFTLVSPHEGKYLDPILKTSQH 362
>gi|406696099|gb|EKC99395.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 436
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 173/366 (47%), Gaps = 60/366 (16%)
Query: 95 EMCVQFDSLLFISLPQVKDVFAAIAPAV-----------GLSVGLAVGQS-SIADEISEL 142
E+C +SL F ++ AAI PA+ G +V LA +S SIA ++ L
Sbjct: 34 ELCESCESLGFKHPTDIQ--VAAIPPALTGRDIIGIAQTGSAVLLAHPRSDSIAKQVQAL 91
Query: 143 IKRPKLEAGICYDPEDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 199
+ + D++ + L I+VATPGRLMDH+ T+GF+L+ L YLV+DE
Sbjct: 92 GAPIGVRTAVIVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLDE 151
Query: 200 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 259
DRLL + + +L++ + +TFL
Sbjct: 152 ADRLLDLDFGPIIDKLLKVIPKER-------NTFL------------------------- 179
Query: 260 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA 319
SATL+ KL + L+ P+ + +++Y L Y + K YL
Sbjct: 180 ------FSATLSTKVEKLKRASLNKPIQVKV-DSKYSTVSTLMQYYVFFPEVQKDAYLFY 232
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
L+ L I+FTS+V+ RL +LN G I + G QS R +L F+ G
Sbjct: 233 LVNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLH---GQMSQSARLGSLNKFKSGG 289
Query: 380 IQVLVSSDAMTRGMDVEGVNNVV-NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
++LV++D +RG+D+ V+ V+ N+D P+ K Y+HR GRTARAG+ G+ TL+ + +V
Sbjct: 290 RKILVATDVASRGLDIPSVDLVIQNFDIPSNSKDYVHRVGRTARAGRSGKSITLVTQYDV 349
Query: 439 KRFKKL 444
K +
Sbjct: 350 VMLKGI 355
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 101/421 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ + I L RD+ + TGSGKT ++ LPI+Q L + + L L++ PTR+LA Q+
Sbjct: 115 IQAQAIPLALEGRDVIGLAETGSGKTAAFVLPILQALLEKQ-QSLFGLILAPTRELAYQI 173
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q D+L I + + VG
Sbjct: 174 ------------------------AQQVDALGSI---------------INVKCATLVGG 194
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + L K+P I+VATPGRL+DH+ T+GF+L+HL
Sbjct: 195 MDMVPQAIALSKKPH---------------------IIVATPGRLLDHLENTKGFSLKHL 233
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
Y+V+DE DRLL + L +L++ + + +
Sbjct: 234 KYMVLDEADRLLDLDFGPVLDKILKVLPREGRHTY------------------------- 268
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
+ SAT++ L + L +P+ ++ + +++ L + K
Sbjct: 269 ------------LYSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKY 316
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K LYL+ LL I+F+ +V T R+ LL G I + G QS R L
Sbjct: 317 KDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPLH---GQLSQSARLGAL 373
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +LV++D RG+D+ V+ VVN+D P+ +TY+HR GRTARAG+ G+ +
Sbjct: 374 NKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVGRTARAGKSGKAVSF 433
Query: 433 L 433
+
Sbjct: 434 V 434
>gi|348590699|ref|YP_004875161.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974603|gb|AEP37138.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 562
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 195/454 (42%), Gaps = 134/454 (29%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----------------S 50
P +V V ++I L +DL +++ TGSGKT ++ LP +Q L S
Sbjct: 27 PTEVQV--KSIPLALEGKDLIVSAQTGSGKTAAFMLPSIQRLLHELETRPQTEEISKAKS 84
Query: 51 NRAVRC----------LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 100
+R R ++ LV+ PTR+LA+QV A ++ I+G H
Sbjct: 85 SRRKRGKSTANPPKYGVQILVLTPTRELAMQVADATKEF----IYGFKGVH--------- 131
Query: 101 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 160
IA VG G+ Y P+ +
Sbjct: 132 -----------------IATLVG---------------------------GMAYGPQ--I 145
Query: 161 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 220
L V+I+VATPGRL+DHI A R L +L L++DE DR+L + + V+ T
Sbjct: 146 NSLSREVEIIVATPGRLLDHIKAGR-VKLHNLKVLILDEADRMLDMGFIHDIKNVVAETP 204
Query: 221 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
+ + ++ SAT + KLA+
Sbjct: 205 DEKQT--------------------------------------LLFSATFEGNTVKLAKE 226
Query: 281 DLHHP--LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
L P + ++ + +++ E+ Y K K L ALL+ ++ IVFT +
Sbjct: 227 MLKSPERIVVSDHKEKHQNIEQFLFYADTVGHKFK--LLEALLRDPDVDQTIVFTKTKRG 284
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
C L +L K E G Q R++T++A ++G+I+VLV++D RG+D++G+
Sbjct: 285 A---CDLAKRLKDLDFKAGELHGDMNQGQRNRTIQALQKGRIKVLVATDVAARGIDIQGI 341
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
++VVNYD P + Y+HR GRT RAG+ GR +TL
Sbjct: 342 SHVVNYDLPMQAEDYVHRIGRTGRAGRDGRAYTL 375
>gi|84999282|ref|XP_954362.1| ATP-dependent RNA helicase [Theileria annulata]
gi|65305360|emb|CAI73685.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 503
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 201/459 (43%), Gaps = 98/459 (21%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D I +PTG GKTL YALP++ + N L +L+++P+R+L
Sbjct: 81 DFIITAPTGQGKTLCYALPLIYNILNLKENRLLSLIIVPSREL----------------- 123
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
+ Q+ +VF+ + +++ D +K
Sbjct: 124 ----------------------VKQIYEVFSWFTDS----------KTTGHD-----LKG 146
Query: 146 PKLEAGICYDPEDVLQELQSAVD----ILVATPGRLMDH-INATRGF--TLEHLCYLVVD 198
P L+A + Y ++ V+ I + TPG L+++ ++ R F T EHL ++V+D
Sbjct: 147 PSLKARVFYGDRSFVKCHDMLVNDPPHIAICTPGVLVEYSVDFQREFYDTFEHLKWIVID 206
Query: 199 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 258
E D +L + + W+ V+ L S S + + GV +
Sbjct: 207 EVDTMLNQTFYEWVDVVVDLV----------------SRLKSKEPNQSLGVPQ------- 243
Query: 259 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK---LKPL 315
K+++SAT+ + + L+L+ P+ L E+ YKLPE L+ ++C ++ L+ L
Sbjct: 244 ----KILVSATVPLKSHDIELLELNRPILLRLKESIYKLPENLKQSYVVCSNRPVSLEFL 299
Query: 316 YLVALLQSLGEEKCIVFTSSVESTHRLCTL-----LNHFGELRIKIKEYSGLQRQSVRSK 370
L+A L +VF S V++ H++ L L H G K E +G Q R+
Sbjct: 300 KLMAFLYKDVTGNVLVFFSKVQTCHKITRLMQIYNLKHGGGF--KAIELTGRMPQKQRNN 357
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
+K +++ L+ SD +RGMD+ N VV+YD P + +YIHRAGRTAR G
Sbjct: 358 AIKTYKDEDRVCLLCSDVASRGMDLSNTNVVVSYDFPNKLSSYIHRAGRTARGNNKGTFC 417
Query: 431 TLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 469
+ K+F + K D + I ++ + + V
Sbjct: 418 VFVSNQTEKKFHNFMNKLKIDEEKLKKIELDIVLNQKKV 456
>gi|330803884|ref|XP_003289931.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
gi|325079973|gb|EGC33549.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
Length = 501
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 190/455 (41%), Gaps = 110/455 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
RD+ ++ TGSGKT S+A+PI+ LS A+V+ PTR+LA+Q
Sbjct: 43 RDIIASAKTGSGKTASFAIPILNLLSEDPYGVF-AVVLTPTRELAVQ------------- 88
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
IAE F+AI + + V +G + L K
Sbjct: 89 --------IAEQ------------------FSAIGAPMNVQVSTVIGGIDTVKQALILDK 122
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
RP I+VATPGRL H+ L+ +LV+DE DRLL
Sbjct: 123 RPH---------------------IIVATPGRLASHLTNGLKIALKFCKFLVLDEADRLL 161
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
E ++ + ++L+ +LP P + +
Sbjct: 162 GEDFELEIASILE---------------YLP---------------------PPTQRQTL 185
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
+ SAT+T + KL + L+ P F+ ++Y + L+ + ++ K YLV LL+
Sbjct: 186 LFSATMTNNLKKLESISLNSP-FIFEDNSKYDTVDTLKQEYIYMPAQAKDCYLVYLLKKH 244
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
+ IVF ++ S + +LN +L I Q R LK F+ GK++VL+
Sbjct: 245 IGQSVIVFINNCYSVEAVKGMLN---KLDIPAVSLHSFLDQKARLSALKVFKSGKVKVLI 301
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
++D +RG+D+ V V+NY K YIHR GRTAR G+ GR + + +V+ K +
Sbjct: 302 ATDVASRGLDIPDVEMVINYKLSNSSKDYIHRVGRTARFGKSGRAISFITPHDVQLIKNI 361
Query: 445 ---------LQKADNDSCPIHSIPSSLIESLRPVY 470
L K D+D H SS + V+
Sbjct: 362 ELVIKKELELYKTDDDEVFRHLKESSTARKIVEVH 396
>gi|224137340|ref|XP_002322533.1| predicted protein [Populus trichocarpa]
gi|222867163|gb|EEF04294.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 189/446 (42%), Gaps = 110/446 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ +E I L +DL + TGSGKT ++ LP ++ + ++V+ V+ PTR+
Sbjct: 36 IQEEAIPYALQGKDLIGVAATGSGKTGAFVLPTLEAILKDSQERKSVQPFFVCVLSPTRE 95
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS-V 126
LA+Q IAE F A+ +G+ V
Sbjct: 96 LAIQ---------------------IAEQ------------------FEALGSGIGVRCV 116
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
L G+ + I KRP ++V TPGRL DH++ T+G
Sbjct: 117 VLVGGEDMLQQSIVLAKKRPH---------------------VIVGTPGRLADHLSNTKG 155
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F+L L YL++DE DRLL ++ L +L
Sbjct: 156 FSLHALKYLILDEADRLLSMDFEKSLDEIL------------------------------ 185
Query: 247 CGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 305
K PR + L SAT+T KL + L +P+ + +Y + + LE
Sbjct: 186 ---------KAIPRNRRTYLFSATMTNKAGKLQRACLRNPVKIEAA-FKYSIVDTLEQGF 235
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
+ LK YLV +L S +VFT + T L +L G I I +G Q
Sbjct: 236 YFMPAALKDCYLVHVLSSKKGATSMVFTRTCRETDFLALVLRKLGLGAIPI---NGQMSQ 292
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
S R L F+ G+ +L+ +D +RG+D+ V+ VVNY+ P K Y HR GRTARAG+
Sbjct: 293 SNRLGALNKFKAGEFNILICTDVASRGLDILSVDVVVNYNIPTNAKDYFHRVGRTARAGR 352
Query: 426 LGRCFTLLHKDEVKRFKKLLQKADND 451
G +L+++ ++ FK++ + +D
Sbjct: 353 SGLAISLVNQFDIGPFKQIEKHIGDD 378
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 187/429 (43%), Gaps = 103/429 (24%)
Query: 11 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTRDLA 69
+ + E I L +D+ + TG GKT ++ALPI+ L + V+ PTR+LA
Sbjct: 33 LKIXTEAIPIALEGKDVTGLAQTGYGKTGAFALPILHALLEAPRPKHFFDCVLSPTRELA 92
Query: 70 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 129
+Q IAE F A+ +G+ +
Sbjct: 93 IQ---------------------IAEQ------------------FEALGSXIGVKCAVL 113
Query: 130 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 189
VG + + ++ K+P I+V TP R++DH+ T+GF+L
Sbjct: 114 VGGIDMVQQSIKIAKQP---------------------HIIVGTPRRVLDHLKHTKGFSL 152
Query: 190 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 249
L YLV+DE DRLL E ++ L +LQ+ + + TFL
Sbjct: 153 GRLKYLVLDEADRLLNEDFEESLNEILQMIPRERK-------TFL--------------- 190
Query: 250 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 309
SAT+T+ KL ++ L +P+ + ++Y + L+ L
Sbjct: 191 ----------------FSATMTKKVQKLQRVCLRNPVKIEA-SSKYSTVDTLKQQYLFLP 233
Query: 310 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRS 369
+K K Y V +L + +VFT + ++T L +L + G I I +G QS R
Sbjct: 234 AKHKDCYFVYILTEMSGSTSMVFTCTCDATRLLALILRNLGLKAIPI---NGHMSQSKRL 290
Query: 370 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 429
F+ G+ +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G
Sbjct: 291 GASNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRFGVA 350
Query: 430 FTLLHKDEV 438
+L+++ E+
Sbjct: 351 ISLVNQYEL 359
>gi|307179995|gb|EFN68085.1| Probable ATP-dependent RNA helicase DDX31 [Camponotus floridanus]
Length = 871
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 208/476 (43%), Gaps = 123/476 (25%)
Query: 11 VAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLS------NRAVRCLRALVVL 63
V Q+ I P +F +D+ I S TGSGKTL+YALPIV+ L NR L AL+V+
Sbjct: 312 TTVQQKAI-PEIFSGKDVLIRSQTGSGKTLAYALPIVELLHKIRPKLNRN-SGLSALIVV 369
Query: 64 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 123
PTR+LALQ Y C FI L + P
Sbjct: 370 PTRELALQT------YEC-----------------------FIKL---------VKPFTW 391
Query: 124 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 183
+ G +G KR +A L+ +IL+ TPGRL+DHI
Sbjct: 392 IVPGYIIGGE----------KRKAEKA-----------RLRKGCNILITTPGRLLDHIKH 430
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
T+ L + Y ++DE DR+L Y+ + + Q S EN
Sbjct: 431 TKALRLNEVRYFILDEADRMLEMGYEKNISDMNQEFDSKAENA----------------- 473
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--------TTGETRY 295
+E+ KD R ++LSATLTQ KLA L +++P+F+ T+G
Sbjct: 474 ---QNIEQDCKDVTQSRRKTILLSATLTQAVEKLAGLAMYNPIFVDAAKENLETSGGDTS 530
Query: 296 KLPERL-------ESYKLICESKLKPL----YLVALLQSLGEEKCIVFTSSVE----STH 340
++ E L +SY ++ KL+ + Y+V+ Q+ G+ K ++F ++ + T
Sbjct: 531 EINEDLIVPQSVIQSY-IVTPPKLRMVTLSAYIVSRCQTPGQHKILIFMATQDMVDYHTE 589
Query: 341 RLCTLLNHFGE----------LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
L ++L + + ++ + G Q R++ K F K VL+ +D
Sbjct: 590 ILSSILTESVDDNDDEDSDPLVNVEFFKLHGNMTQKERTEVFKTFSRAKSGVLLCTDVAA 649
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
RG+D+ V+ VV Y P + Y+HR GRTARAG G L EV+ F ++L+
Sbjct: 650 RGLDMPKVDCVVQYTGPISTRDYVHRIGRTARAGCSGTATIFLTPSEVE-FVRMLE 704
>gi|393245773|gb|EJD53283.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 178/418 (42%), Gaps = 103/418 (24%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ + TGSGKT ++ALPI+Q L R L A + PTR+LA Q+ +
Sbjct: 64 DIIGVAETGSGKTAAFALPILQKLWEDP-RPLFACCIAPTRELAFQIAQS---------- 112
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
F A+ ++G+ V + +G ++ L KR
Sbjct: 113 -----------------------------FEALGGSLGVRVAVIIGGVKEIEQQIALSKR 143
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
P I+VA PGRL H+ T+GF+L L YLV+DE DRLL
Sbjct: 144 PH---------------------IIVAAPGRLNWHLENTKGFSLRTLKYLVLDEADRLLD 182
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+ + +L++ + T+L
Sbjct: 183 LDFGKDIDKLLKVLPKERH-------TYL------------------------------- 204
Query: 266 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 325
SAT+T KL + L +P + ++Y L Y L+ K + L+ L SL
Sbjct: 205 FSATMTDKVEKLQRASLSNPKRVAVS-SKYSTVSTLLQYYLLVPLPQKEVNLIYLCNSLA 263
Query: 326 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 385
E+ I+FT + R+ +L G + + G QS R L F+ G ++LV+
Sbjct: 264 EKSIIIFTRTQHDAQRVSIILRTLGFSAVPLH---GALSQSARLGALAKFKAGGRKILVA 320
Query: 386 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
+D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ T + + +V+ FK+
Sbjct: 321 TDVASRGLDIPHVDIVINYDVPTNSKDYIHRVGRTARAGRAGKSVTFVTQYDVEVFKR 378
>gi|71031306|ref|XP_765295.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68352251|gb|EAN33012.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 470
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 195/449 (43%), Gaps = 118/449 (26%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L +D+ + TGSGKT ++ +PI+Q L + R L +L++ PTR+
Sbjct: 64 PTKIQI--EAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQR-LFSLILAPTRE 120
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
L+LQ+ K+ ++ +GL V
Sbjct: 121 LSLQI---------------------------------------KEQLISLGSEIGLDVC 141
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
L +G + + +L K+P I+V +PGR+ DH+ T+GF
Sbjct: 142 LILGGLDMVSQALQLSKKP---------------------HIIVGSPGRIADHLQNTKGF 180
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+LE + YLV+DE D+LL +D ++ + T LP
Sbjct: 181 SLETIKYLVLDEADKLLS---------------TDFDDSLNKIITSLP------------ 213
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
KDK V + SAT+T KL ++ L P+ + T+Y E L L+
Sbjct: 214 ------KDK-----VTYLYSATMTSKITKLQKVTLMKPIQINVN-TKYHTSEHLIQKYLL 261
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K YL +L +VF ++ ++ ++ L + L K G Q
Sbjct: 262 IPLKFKYTYLACILWKYSTSTIMVFCNTCLTSQKVTLFLQN---LSFKSVCLHGKLSQIQ 318
Query: 368 RSKTLKAFREGKIQ-------------VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
R +L +F+ GK+Q +LV +D +RG+D+ V+ V+N+D P K YI
Sbjct: 319 RLNSLNSFKTGKLQPIPQPHIISGLFNILVVTDVGSRGLDIPFVDLVINFDVPNTSKDYI 378
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKK 443
HR GRTARAG+ G TL+ + +++ F++
Sbjct: 379 HRVGRTARAGKSGISLTLITQYDIESFQR 407
>gi|169598332|ref|XP_001792589.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
gi|118595361|sp|Q0V1Z7.1|DRS1_PHANO RecName: Full=ATP-dependent RNA helicase DRS1
gi|111069059|gb|EAT90179.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
Length = 808
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 207/475 (43%), Gaps = 109/475 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q + I + +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 303 IGFTEPTPIQA----KAIPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRPKKVPTTR 358
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+ +PTR+LA+Q C N+ A F + F L
Sbjct: 359 VAIFMPTRELAVQ---------CFNV---------ATKLASFTDITFALL---------- 390
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A G SS E+ L RP D+++ATPGR +
Sbjct: 391 ----------AGGFSSREQEVM-LKTRP---------------------DVVIATPGRFI 418
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ T F +EHL LV+DE DR+L E ++ L +L T +P +
Sbjct: 419 DHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEIL---------------TTIPKSR 463
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T +KL ++ + P+ L ++ +
Sbjct: 464 QT-----------------------MLFSATMTSTVDKLIRIGMDKPVRLMVDAKKHTVK 500
Query: 299 ERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ + + + K YL+ + + + E+ I+F + HR+ + G +K
Sbjct: 501 GLTQEFIRLRQGKEDKRLAYLMYICEKIYTERVIIFFRQKKEAHRVRVVFALCG---LKA 557
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q R + ++AFR GK L+++D +RG+D++ V+ V+NY+ P + Y+HR
Sbjct: 558 SELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQSHEIYLHR 617
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 471
GRTARAG+ GR TL + + K K+ ++++ + + S + E+ R + K
Sbjct: 618 VGRTARAGRSGRACTLAAEPDRKVVKQAVKQSRDQGSKVVSRQVPVEETDRWMEK 672
>gi|121700629|ref|XP_001268579.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
gi|119396722|gb|EAW07153.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
Length = 848
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 161/359 (44%), Gaps = 115/359 (32%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q A C+ C
Sbjct: 295 DLCISAATGSGKTLSYVLPLVTALEPTPAPRMRGLIVVPTRELVKQAREA-CELC----- 348
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
A GL VG AVG +I DE L++
Sbjct: 349 ---------------------------------AAGSGLRVGSAVGNVAIKDEQRTLMRI 375
Query: 146 PKLEAGICYDPE-----------------------------------DVLQELQSAVDIL 170
+ CY PE +Q+ + VDIL
Sbjct: 376 DQ-----CYGPEISKQRQTVDLTGEDWTKFNLLDYIAEAGDLSESLPGYIQKAEPNVDIL 430
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
+ TPGRL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V+ S
Sbjct: 431 ICTPGRLVDHLRYTKGFTLEHLEWLVIDEADRLLNESFQEWVDVVMN----------SLD 480
Query: 231 STFLPSAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL- 288
+ P AFGS + + G+ K+ PR K++LSAT+T+D +KL L L +P +
Sbjct: 481 ARKSPKAFGSSGQFMAELGLPIQVKE---PR--KVILSATMTRDVSKLNSLRLANPKLVI 535
Query: 289 --------------TTGETRYKLPERLESYKL-ICESKLKPLYLVALLQS----LGEEK 328
+ ++ +P L+ Y + + + KPLYL++LL+S L EE+
Sbjct: 536 VSSADPTSTEDGGHVKSDEQFTIPRTLKEYSVSVGDGSQKPLYLLSLLRSHINVLAEEQ 594
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 329 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S ES RL L++ L ++ + S KTL A+R GKI ++V++D
Sbjct: 676 VLIFTKSSESASRLSRLISLLDPSLANQVGTIIKSNKSSASRKTLTAYRRGKISIIVATD 735
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
+RG+D++ + +VVNYD P + TY+HR GRTARAG+ G +TL+ E + F+ + K
Sbjct: 736 RASRGLDLQSLTHVVNYDVPPSVTTYVHRVGRTARAGKKGSAWTLVAHREGRWFENEISK 795
Query: 448 ADN 450
A +
Sbjct: 796 ASD 798
>gi|260808869|ref|XP_002599229.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
gi|229284506|gb|EEN55241.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
Length = 436
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 187/432 (43%), Gaps = 119/432 (27%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L +D+ + TGSGKT ++ALPI+Q+L + R L ALV+ PTR+LA Q+
Sbjct: 47 IQTEAIPLALEGKDVIGLAETGSGKTGTFALPILQSLLEKPQR-LFALVLTPTRELAFQI 105
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
+ + F A+ ++G+ + VG
Sbjct: 106 S---------------------------------------EQFEALGSSIGIKCVVVVGG 126
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+ + +L K+P +++ATPGRL+DH+ T+GF L L
Sbjct: 127 IDMVTQALQLAKKP---------------------HVIIATPGRLVDHLENTKGFNLRAL 165
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
YL VD+ +++ +L
Sbjct: 166 KYL-VDKILKVIPRERHTYL---------------------------------------- 184
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
SAT+T+ KL + L +P+ + ++YK + L+ L SK
Sbjct: 185 -------------FSATMTKKVAKLQRASLSNPVKVEVN-SKYKTVDTLQQSYLFIPSKY 230
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K +YLV++L L +VF S+ +T R LL + G I + G Q+ R L
Sbjct: 231 KDVYLVSILNELAGNSFMVFCSTCNNTQRTAFLLRNLGFNAIPL---HGQLSQNSRLGAL 287
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 288 HKFKAKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 347
Query: 433 LHKDEVKRFKKL 444
+ + +V+ ++++
Sbjct: 348 VTQYDVELYQRI 359
>gi|399116968|emb|CCG19780.1| ATP-dependent rna helicase [Taylorella asinigenitalis 14/45]
Length = 562
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 193/454 (42%), Gaps = 134/454 (29%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL------------------ 49
P +V V ++I L +DL +++ TGSGKT ++ LP +Q L
Sbjct: 27 PTEVQV--KSIPLALEGKDLIVSAQTGSGKTAAFMLPSIQRLLHELETRPQTEEISKAKS 84
Query: 50 ---------SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 100
+N ++ LV+ PTR+LA+QV A ++ I+G H
Sbjct: 85 SRRKKGKPTANPPKYGVQILVLTPTRELAMQVADATKEF----IYGFKGVH--------- 131
Query: 101 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 160
IA VG G+ Y P+ +
Sbjct: 132 -----------------IATLVG---------------------------GMAYGPQ--I 145
Query: 161 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 220
L V+I+VATPGRL+DHI A R L +L L++DE DR+L + + V+ T
Sbjct: 146 NSLSREVEIIVATPGRLLDHIKAGR-VKLHNLKVLILDEADRMLDMGFIHDIKNVVAETP 204
Query: 221 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 280
+ + ++ SAT + KLA+
Sbjct: 205 DEKQT--------------------------------------LLFSATFEGNTVKLAKE 226
Query: 281 DLHHP--LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
L P + ++ + +++ E+ Y K K L ALL+ ++ IVFT +
Sbjct: 227 MLKSPERIVVSDHKEKHQNIEQFLFYADTVGHKFK--LLEALLRDPDVDQTIVFTKTKRG 284
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
C L +L K E G Q R++T++A ++G+I+VLV++D RG+D++G+
Sbjct: 285 A---CDLAKRLKDLDFKAGELHGDMNQGQRNRTIQALQKGRIKVLVATDVAARGIDIQGI 341
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
++VVNYD P + Y+HR GRT RAG+ GR +TL
Sbjct: 342 SHVVNYDLPMQAEDYVHRIGRTGRAGRDGRAYTL 375
>gi|327356903|gb|EGE85760.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 848
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 152/321 (47%), Gaps = 87/321 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V + + LR
Sbjct: 279 GYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVAGIEQLPLARLRG 337
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 338 LVVVPTRELVKQARDA-CELC--------------------------------------A 358
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK +L E+ ++ ++ + E+
Sbjct: 359 TRTGLRIGTAVGTASLKEEQALLIKHDQLYSPSNRRIGNGHQMIAESWASFNFQEYITEV 418
Query: 164 QSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+ + +DIL+ TPGRL+DHI +T+GF+LEHL +LV+DE DRLL E++Q
Sbjct: 419 ERSHSAFPDHVTTPSPNIDILICTPGRLVDHIRSTKGFSLEHLEWLVIDEADRLLNESFQ 478
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
W+ V+ + + LP + C PRL K++LSAT
Sbjct: 479 EWVEVVIPALERVRVDVAGKSGRILPDLGWQI-----C----------KPRLRKIILSAT 523
Query: 270 LTQDPNKLAQLDLHHPLFLTT 290
+T+D KL L L +P + +
Sbjct: 524 MTRDIAKLNSLRLQNPKLVVS 544
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 329 CIVFTSSVESTHRLCTLL--------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+VFT S ES RL LL N G L + + S KT+ A+R GK+
Sbjct: 675 VLVFTKSSESASRLARLLVLMHPPFANRIGTL-------AKSSKSSTSRKTISAYRNGKL 727
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
+++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +TL+ E +
Sbjct: 728 SIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAWTLVAHREGRW 787
Query: 441 FKKLLQKADNDSCP 454
F + K CP
Sbjct: 788 FANEIVK-----CP 796
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 189/437 (43%), Gaps = 104/437 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P+Q+A I L RD+ + TGSGKT ++ +P++ L R + +V+ P+R+
Sbjct: 57 PIQMAA----IPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQR-IYCVVLAPSRE 111
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
L C+ Q+ + F A++ ++ L V
Sbjct: 112 L------------CE---------------------------QIAEQFRALSSSIALQVC 132
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ +G + + S L KRP ++VA+PGRL DH+ T+GF
Sbjct: 133 VIIGGVDMVHQASALAKRPH---------------------VIVASPGRLADHVENTKGF 171
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+L + LV+DE DRLL + + L ++ ++ + TFL
Sbjct: 172 SLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQ-------TFL------------- 211
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ +KL ++ L P+ + + +Y E L+ L+
Sbjct: 212 ------------------FSATMTKKLSKLQKMALKDPISVQVDD-KYSTAENLDQRFLL 252
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
K K YL ALL IVF + + R L I G Q+
Sbjct: 253 VPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKFTTICKVCLHGKMTQAD 312
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
RS+ L+ F+ G + +LV+++ RG+D+ V V+N+D P K YIHR GRTARAG+ G
Sbjct: 313 RSRALQIFKTGSVNILVATEVGGRGLDLPMVELVINFDIPECSKDYIHRVGRTARAGRSG 372
Query: 428 RCFTLLHKDEVKRFKKL 444
T++ + +V+ F+++
Sbjct: 373 LALTVVTQYDVELFQRI 389
>gi|404216140|ref|YP_006670335.1| DNA and RNA helicase, Superfamily II [Gordonia sp. KTR9]
gi|403646939|gb|AFR50179.1| DNA and RNA helicase, Superfamily II [Gordonia sp. KTR9]
Length = 527
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 203/476 (42%), Gaps = 108/476 (22%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCL----RALVVLP 64
A+ + T+ L DL + TG GKT + +P+V L++ A VR L RAL+++P
Sbjct: 43 AIQELTLPLALEGHDLIGQARTGMGKTFGFGIPLVHRLAHAAASGVRPLDNTPRALIIVP 102
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR E+CVQ L + IAPA+ +
Sbjct: 103 TR----------------------------ELCVQVTGDLQV-----------IAPALDV 123
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ +AD + +K + G Y+ + + ELQS VD++V TPGRL+D A
Sbjct: 124 T---------LADGTTRPLKITSIYGGRPYEAQ--IAELQSGVDVVVGTPGRLLDL--AQ 170
Query: 185 RG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
+G L + LV+DE D +L FLP
Sbjct: 171 QGHLVLGKVSILVLDEADEMLDLG-------------------------FLPD------- 198
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLE 302
+ER P PR M+ SAT+ LA+ L+ P + + +R +
Sbjct: 199 -----IERIMSALPTPRQT-MLFSATMPGPIVTLARTFLNRPTHIRAENANDSAVHDRTK 252
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
Y + K + +LQ+ G +VFT + + ++ + E K+ G
Sbjct: 253 QYAYRAHALDKAELVARILQADGRGATMVFTRTKRTAQKVA---DDLAERGFKVGAVHGD 309
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R K L FR+G I VLV++D RG+D++ V +V+NY P KTY+HR GRT R
Sbjct: 310 LGQVAREKALNRFRDGTIDVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIGRTGR 369
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR-----PVYKSG 473
AG+ G TL+ DE+ R+ +L+ KA N P S E LR P K+G
Sbjct: 370 AGRTGIAVTLVDWDELHRW-ELIDKALNLGIPDPPETYSTSEHLRADLSIPESKTG 424
>gi|34782983|gb|AAH12461.2| DDX51 protein, partial [Homo sapiens]
Length = 186
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 6 CSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQ 63
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR GRTARAG+ G
Sbjct: 64 RRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTG 123
Query: 428 RCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 473
+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 124 QAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYEEA 169
>gi|239612589|gb|EEQ89576.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ER-3]
Length = 845
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 152/321 (47%), Gaps = 87/321 (27%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V + + LR
Sbjct: 279 GYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVAGIEQLPLARLRG 337
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LVV+PTR+L Q A C+ C A
Sbjct: 338 LVVVPTRELVKQARDA-CELC--------------------------------------A 358
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAGICYDPEDVLQEL 163
GL +G AVG +S+ +E + LIK +L E+ ++ ++ + E+
Sbjct: 359 TRTGLRIGTAVGTASLKEEQALLIKHDQLYSPSNRRIGNGHQMIAESWASFNFQEYITEV 418
Query: 164 QSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
+ + +DIL+ TPGRL+DHI +T+GF+LEHL +LV+DE DRLL E++Q
Sbjct: 419 ERSHSAFPDHVATPSPNIDILICTPGRLVDHIRSTKGFSLEHLEWLVIDEADRLLNESFQ 478
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
W+ V+ + + LP + C PRL K++LSAT
Sbjct: 479 EWVEVVIPALERVRVDVAGKSGRILPDLGWQI-----C----------KPRLRKIILSAT 523
Query: 270 LTQDPNKLAQLDLHHPLFLTT 290
+T+D KL L L +P + +
Sbjct: 524 MTRDIAKLNSLRLQNPKLVVS 544
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 329 CIVFTSSVESTHRLCTLL--------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+VFT S ES RL LL N G L + + S KT+ A+R GK+
Sbjct: 672 VLVFTKSSESASRLARLLVLMHPPFANRIGTL-------AKSSKSSTSRKTISAYRNGKL 724
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
+++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +TL+ E +
Sbjct: 725 SIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAWTLVAHREGRW 784
Query: 441 FKKLLQKADNDSCP 454
F + K CP
Sbjct: 785 FANEIVK-----CP 793
>gi|296117857|ref|ZP_06836440.1| putative ATP-dependent RNA helicase [Corynebacterium ammoniagenes
DSM 20306]
gi|295969088|gb|EFG82330.1| putative ATP-dependent RNA helicase [Corynebacterium ammoniagenes
DSM 20306]
Length = 450
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 190/468 (40%), Gaps = 120/468 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL---R 58
GI+S FP+Q A + L +D+ PTGSGKT ++ LP++ L+ R
Sbjct: 21 GITSPFPIQEAAIPDA----LAGKDILGRGPTGSGKTFTFGLPMIARLAGSGASKPGRPR 76
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
LV+ PTR+LA+Q+ + D
Sbjct: 77 GLVLAPTRELAIQIQQ------------------------RLDE---------------P 97
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
A A+GL V VG +I + I +L RP VDILVATPGR
Sbjct: 98 ANAMGLRVLSVVGGVNINNHIRQL-ARP--------------------VDILVATPGRAQ 136
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
D +N + +L +DE D++ + + +L LT DN R
Sbjct: 137 DLVNQKK-LSLSDATLTALDEADQMADMGFLPQVKKLLALT-PDNAQR------------ 182
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
++ SATL D NKL +H P+ +T + +
Sbjct: 183 -------------------------LLFSATLDGDVNKLVSRFMHDPVTHSTAPVQASV- 216
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+ ++ Y + + V L + E K I+F + R L G I
Sbjct: 217 DTMKHYVFFVGER-EDRNKVVLRIAAREGKTIMFMRTKHGVDRQAKKLRRAG---IPAMG 272
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G + Q+ RS TL+ F +G + VLV++D RG+DV V+ VV+ D PA K Y+HRAG
Sbjct: 273 LHGDKGQNTRSTTLQGFADGSVSVLVATDIAARGIDVHDVSLVVHVDPPAEHKAYLHRAG 332
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKA---------DNDSCPIHS 457
RTARAG+ G TL+ ++ KL+ KA DS P H+
Sbjct: 333 RTARAGEAGSVVTLVMNEQRDEVAKLIDKAGVDAETIDISTDSSPAHN 380
>gi|67516711|ref|XP_658241.1| hypothetical protein AN0637.2 [Aspergillus nidulans FGSC A4]
gi|40746024|gb|EAA65180.1| hypothetical protein AN0637.2 [Aspergillus nidulans FGSC A4]
gi|259489096|tpe|CBF89085.1| TPA: DEAD/DEAH box helicase, putative (AFU_orthologue;
AFUA_1G16940) [Aspergillus nidulans FGSC A4]
Length = 853
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 155/334 (46%), Gaps = 45/334 (13%)
Query: 2 GISSLFPVQVAVWQETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G F VQ AV + GP D+C+++ TGSGKTLSY LP+V L LR L
Sbjct: 270 GYKEAFAVQAAVIPLLLKGPNNHTGDICVSAATGSGKTLSYVLPLVTELEQIPAPRLRGL 329
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+V+PTR+L Q A C++C GL ++ + ++ + + + V + +
Sbjct: 330 IVVPTRELVKQAREA-CEFCTAGT-GLRVGSAVGNVAIKDEQRSLMRIEHVYSPESVESR 387
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
G S+ D IS + G + E VDIL+ TPGRL+DH
Sbjct: 388 RKAELTGEEWADFSLQDYISNTTDLGETLPGYIHRGE-------PNVDILICTPGRLVDH 440
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFG 239
I T+GFTL+HL +LV+DE DRLL E++Q W+ V+Q L F + FL
Sbjct: 441 IRYTKGFTLKHLQWLVIDEADRLLNESFQEWVDVVMQSLDARKAYGAFGPSGRFLADLGM 500
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------- 291
SL+T PR K+VLSAT+T+D +KL L L +P + G
Sbjct: 501 SLQTKE-------------PR--KVVLSATMTKDVSKLNSLRLTNPRLVVVGGSDQTTTA 545
Query: 292 ----------ETRYKLPERLESYKL-ICESKLKP 314
+ R+ LP L Y + + + + KP
Sbjct: 546 DDESGVVVHADERFTLPTTLREYSIAVGDGEHKP 579
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
+ S KTL A+R+GKI +++++D +RG+D++ + +V+NYD PA I TY+HR GRTAR
Sbjct: 719 NKSSASRKTLSAYRQGKISIIIATDRASRGLDLQSLTHVINYDVPASITTYVHRVGRTAR 778
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADN 450
AG G +TL+ E + F + K N
Sbjct: 779 AGNEGSAWTLVAHREGRWFTNEISKGSN 806
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 185/448 (41%), Gaps = 110/448 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P QVA +T+ +D+ +S TG+GKT+S+ LPIV LS A+V+ PTR+
Sbjct: 38 PCQVACIPQTLNG----KDIIGSSETGTGKTMSFVLPIVDKLSVDPCGVF-AIVLTPTRE 92
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q+ D F AI + + V
Sbjct: 93 LAFQIY---------------------------------------DQFKAIGNPMSIRVA 113
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI---NAT 184
+ VG + +EL RP ++VATPGRL D ++
Sbjct: 114 VVVGGLESIRQATELENRPH---------------------VVVATPGRLADLFTIEDSV 152
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F L + +LV+DE DRLL + + + L T+L + + +
Sbjct: 153 ERFHLHSIRFLVLDEADRLLEDGFASSLSTILDVLPVNRQT------------------- 193
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
+V SAT+ +L++ T+ +RY LE +
Sbjct: 194 -------------------LVYSATMNDKMEQLSKTCRSECFIYTSSSSRYSQVRELEQF 234
Query: 305 KLICESKLKPLYLV-ALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
L+ ++K YL LL CI+FT S + L L + G + +
Sbjct: 235 YLLIPFQMKTCYLAYLLLYGFPSFSCIIFTGSCKRCQHLFLTLEYLG---LNVGVLHSKM 291
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
+Q R K + + G I++L+ +D +RG+D+ V VVNY P+ TYIHR GRTARA
Sbjct: 292 KQMERLKAIHNIQRGTIRILICTDVASRGLDIPQVELVVNYHIPSKPSTYIHRVGRTARA 351
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADND 451
G G+ +L+ + EV+ F+ + ++ + +
Sbjct: 352 GNRGKAISLVSQFEVEIFRNIERRLERE 379
>gi|295670994|ref|XP_002796044.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284177|gb|EEH39743.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 319
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 41/265 (15%)
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 14 IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------- 63
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
LP RR + SAT++ L + L +PL +
Sbjct: 64 -----LPRE-------RRT----------------YLFSATMSSKVESLQRASLSNPLRV 95
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
+ ++Y+ L L K K +YLV LL + I+FT +V T RL LL
Sbjct: 96 SISSSKYQTVSALLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRA 155
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G I + G QS R L FR +LV++D RG+D+ V+ V+N+D P
Sbjct: 156 LGFGAIPLH---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPP 212
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLL 433
KTYIHR GRTARAG+ G F+ +
Sbjct: 213 DSKTYIHRVGRTARAGKSGHAFSFV 237
>gi|169234830|ref|NP_001108495.1| probable ATP-dependent RNA helicase DDX49 [Rattus norvegicus]
gi|165971701|gb|AAI58856.1| Ddx49 protein [Rattus norvegicus]
Length = 480
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 193/445 (43%), Gaps = 114/445 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVRCL 57
+G+ PVQ+ P + E C+ + TGSGKT ++ LPI+Q LS + CL
Sbjct: 20 LGLKQPTPVQLGCI-----PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCL 74
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
V+ PTR+LA Q IAE F
Sbjct: 75 ---VLTPTRELAYQ---------------------IAEQ------------------FRV 92
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+ +GL + VG + + EL ++P +++ATPGRL
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSRKP---------------------HVVIATPGRL 131
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
DH+ ++ F ++ + +LV+DE DRLL + + +D T L +
Sbjct: 132 ADHLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFT---------------ADLETILSAV 176
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
+T ++ SATLT +L L + P F T ++
Sbjct: 177 PARRQT--------------------LLFSATLTDTLKELQGLATNQPFFWEAQAT-VRM 215
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGE--EKC--IVFTSSVESTHRLCTLLNHFGELR 353
E+L+ L+ K+K YLV L+Q+ + E C I+FT++ ++ LC +L F
Sbjct: 216 VEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPT 275
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+ + + +Q R L F+ ++L+++D +RG+D+ V V+N++ P K Y
Sbjct: 276 VAL---HSMMKQKERFAALARFKSSTYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEV 438
IHR GRTARAG+ G+ TL+ + ++
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDI 357
>gi|341897829|gb|EGT53764.1| hypothetical protein CAEBREN_24102 [Caenorhabditis brenneri]
Length = 485
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 45/308 (14%)
Query: 163 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 222
L+S D++VATPGRL+DH++ + F L + LV+DE DR+L EA++ + +++L
Sbjct: 13 LRSGPDVVVATPGRLIDHLHNSPNFNLGAIEVLVLDEADRMLEEAFRDQMNELIRLC--- 69
Query: 223 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 282
ENR + ++ SAT+T++ ++LA + L
Sbjct: 70 AENRQT-----------------------------------LLFSATMTEEIDELASMSL 94
Query: 283 HHPLFLTTGE---TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 339
P+ + E T KL + + ES + + + AL+ + IVF + +
Sbjct: 95 KKPVKIFINENTDTALKLRQEFIRIRAGRESDRESI-VAALVTRTFQTNTIVFVRTKKDC 153
Query: 340 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
R+ LL G IK+ + Q R ++L F++G+I VLVS+D +RG+D+EGV
Sbjct: 154 QRMQILLGLLG---IKVGQMQSSLTQGQRIESLSKFKKGEIDVLVSTDLASRGLDIEGVQ 210
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 459
V+N + P IK YIHR GRTARAG+ GR +L+ ++E K K+++ + + +
Sbjct: 211 TVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEEERKLLKEIVNSNADRTLKQRLVA 270
Query: 460 SSLIESLR 467
++E+ R
Sbjct: 271 PEVVEAYR 278
>gi|358378227|gb|EHK15909.1| hypothetical protein TRIVIDRAFT_174620, partial [Trichoderma virens
Gv29-8]
Length = 652
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 149/292 (51%), Gaps = 40/292 (13%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DL +++ TGSGKTL+YALPIV+ LSN V LRALVVLPTR+L Q + C K
Sbjct: 130 DLLVSAATGSGKTLAYALPIVRDLSNSVVTRLRALVVLPTRELVKQAQEV-FELCAKAYE 188
Query: 86 G-----LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 140
G + +I + + L +S D A S G S+ D++
Sbjct: 189 GEDRKRVRVGIAIGNQSLASEQDLLVSKETRYDPEAYKQLEQEASNG--ASSSNNEDDLD 246
Query: 141 ELIKRPKLE-AGICYDP-EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 198
+L+ P A P + + + S VDIL+ TPGRL++H++ T GF+L ++ +LVVD
Sbjct: 247 DLLSGPNTRRANPRIGPWQGQVIDFYSKVDILICTPGRLVEHLDQTPGFSLSYIRWLVVD 306
Query: 199 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 258
E D+LL +++Q WL VL+ F S FG+ R F D PY
Sbjct: 307 EADKLLAQSFQGWLDVVLE--------------KFKTSEFGA----------RDFPDMPY 342
Query: 259 PRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGE----TRYKLPERLESY 304
+ K++LSATLT+D + L QL L P + L +G+ T + LPE L Y
Sbjct: 343 SGVRKILLSATLTRDLSLLNQLALRRPKLIVLESGKDVQVTEHSLPESLREY 394
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 366 SVRSKTLKAFR--EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
S+R KTL+AF ++++++SD + RG+D+ + +V+NYD P + +Y+HR GRTARA
Sbjct: 532 SIRRKTLRAFTTPSSPLRLIIASDLVARGIDIPKLPHVINYDLPPSVASYVHRVGRTARA 591
Query: 424 GQLGRCFTLLHKDEVKRF 441
G+ G +TL+ E F
Sbjct: 592 GRSGCAWTLVGDGESGWF 609
>gi|149276646|ref|ZP_01882789.1| possible ATP-dependent RNA helicase [Pedobacter sp. BAL39]
gi|149232315|gb|EDM37691.1| possible ATP-dependent RNA helicase [Pedobacter sp. BAL39]
Length = 376
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 197/447 (44%), Gaps = 106/447 (23%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRALVVLPTRDL 68
A+ Q I L ++D+ + TGSGKT Y LP++ L R LV++PTR+L
Sbjct: 26 AIQQTVIPAILAKKDVLGIAKTGSGKTAGYVLPVLTNLQQSLGPKNRHANVLVLVPTREL 85
Query: 69 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 128
A QVK+VF
Sbjct: 86 A---------------------------------------EQVKEVF------------- 93
Query: 129 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 188
+ + + E +K + G+ + + + LQ V++LV TPGRL++ + A
Sbjct: 94 ----KTFSTSLPEAVKTLAVYGGVSINTQ--MMALQ-GVNVLVGTPGRLLELV-AANSVN 145
Query: 189 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 248
L + L++DE D++L ++ + ++ L + +N
Sbjct: 146 LSSVETLILDEADKMLNLGFKEEVNKIIALLPAKRQN----------------------- 182
Query: 249 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLIC 308
++ SATL++D + QL LH P+ + E L ++ ++
Sbjct: 183 ---------------VLFSATLSKDIEHIHQLLLHDPVVVKIEEGEDSLELITQTAYIVS 227
Query: 309 ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 368
E K P +L +L++ ++ +VF SS+ H++ ++N + +I K + + Q R
Sbjct: 228 EDKKGP-FLRSLIKKHRMKQVLVFASSI---HQVEAIVNKLQKNKIDAKAFHSKKSQGNR 283
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
+ +L F+ G+I+VLV++D M RG+D++G+ V+NY+ P K Y+HR GRT RAG G
Sbjct: 284 TDSLAHFKFGRIKVLVATDLMARGIDIDGLPYVINYELPRSPKDYVHRIGRTGRAGNTGE 343
Query: 429 CFTLLHKDEVKRFKKLLQKADNDSCPI 455
+L+ +E+ F +++QK P+
Sbjct: 344 AISLVSHNELHHF-EVIQKKMGKQVPL 369
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 195/454 (42%), Gaps = 107/454 (23%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCK 82
+D+ + TGSGKT ++ +PI++ L + + R + +PTR+LA+Q C
Sbjct: 327 KDVVGGAETGSGKTAAFLIPILERLLYRQKKIPTTRVAIFMPTRELAVQ---------CF 377
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
N+ A F + F L G S ++ + L
Sbjct: 378 NV---------ATKLASFTDITF---------------------ALMAGGFSSREQEAVL 407
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
RP D+++ATPGR +DH++ T F +E+L LV+DE DR
Sbjct: 408 KTRP---------------------DVVIATPGRFIDHMHNTAAFQVENLEILVLDEADR 446
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
+L E +++ L +L T +P + +
Sbjct: 447 MLEEGFESQLNEIL---------------TTIPKSRQT---------------------- 469
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP--LYLVAL 320
M+ SAT+T +KL ++ + P+ L + + + + + + K YL+ +
Sbjct: 470 -MLFSATMTSSVDKLIRIGMDKPVRLMVDSKKQTVKGLTQEFVRLRQGKEDKRLAYLMYI 528
Query: 321 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+ + EK IVF + HR+ + G +K E G Q R + ++AFR GK
Sbjct: 529 CEKIYTEKVIVFFRQKKEAHRVRVVFALCG---LKASELHGNMSQEQRIQAVEAFRSGKS 585
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
L+++D +RG+D++ V+ V+NY+ P + Y+HR GRTARAG+ GR TL + + K
Sbjct: 586 SYLLATDVASRGLDIKNVSTVINYEAPQTHEIYLHRVGRTARAGRSGRACTLAAEPDRKV 645
Query: 441 FKKLLQKADNDSCPIHS--IPSSLIESLRPVYKS 472
K+ ++ + + S +P+ E KS
Sbjct: 646 VKQAVKASREQGAKVVSRQVPAEETEKWMKKIKS 679
>gi|3775997|emb|CAA09201.1| RNA helicase [Arabidopsis thaliana]
Length = 376
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 63/332 (18%)
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
Q+ + F A+ + L + VG + L KRP +
Sbjct: 24 QIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH---------------------V 62
Query: 170 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 229
+VATPGRL DH++ T+GF+L+ L YLV+DE DRLL E ++ L +L+
Sbjct: 63 IVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE------------ 110
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
+ P R + SAT+T+ KL + L +P+ +
Sbjct: 111 -------------------------EIPLERKT-FLFSATMTKKVRKLQRACLRNPVKIE 144
Query: 290 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
++Y + L+ +K K YLV +L + E ++FT + + T L +L
Sbjct: 145 AA-SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSL 203
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
G I I SG QS R L F+ G+ +LV +D +RG+D+ V+ V+NYD P
Sbjct: 204 GFRAIPI---SGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTN 260
Query: 410 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
K YIHR GRTARAG+ G +L+++ E++ +
Sbjct: 261 SKDYIHRVGRTARAGRSGVGISLVNQYELEWY 292
>gi|149757285|ref|XP_001503455.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Equus caballus]
Length = 483
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 193/445 (43%), Gaps = 114/445 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVRCL 57
+G+ PVQ+ P + E C+ + TGSGKT ++ LPI+Q LS + CL
Sbjct: 20 LGLKQPTPVQLGCI-----PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCL 74
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
V+ PTR+LA Q IAE F
Sbjct: 75 ---VLTPTRELAYQ---------------------IAEQ------------------FRV 92
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+ +GL + VG + + EL ++P +++ATPGRL
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKP---------------------HVVIATPGRL 131
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
DH+ ++ F+++ + +LV+DE DRLL E +D + L +
Sbjct: 132 ADHLRSSSTFSIKKIRFLVLDEADRLL-------------------EQGCTDFTVDLEAI 172
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
++ R+ ++ SATLT +L L + P F + +
Sbjct: 173 LAAVPARRQT----------------LLFSATLTDTLRELQGLATNQPFFWE-AQAPVRT 215
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELR 353
E+L+ L+ K+K YLV L+Q+ +E I+FT++ ++ LC +L FG
Sbjct: 216 VEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHQDWSIIIFTNTCKTCQILCMMLRKFGFPA 275
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+ + RQ R L F+ ++L+++D +RG+D+ V V+N++ P K Y
Sbjct: 276 VAL---HSTMRQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEV 438
IHR GRTARAG+ G+ TL+ + ++
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDI 357
>gi|67477952|ref|XP_654408.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56471449|gb|EAL49018.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703981|gb|EMD44318.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba histolytica
KU27]
Length = 432
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 193/449 (42%), Gaps = 113/449 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ + +I L ++D+ + TGSGKT S+ LP+VQ L NR C+ ++ PTR+
Sbjct: 35 IQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNRGFYCI---IIEPTRE 91
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA QV I EM +LP GL+
Sbjct: 92 LAAQVVEV-----------------IDEMGK--------ALP-------------GLTSC 113
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
L VG + + +L KRP+ ++V TPGR++ HI T+G
Sbjct: 114 LLVGGMDVMKQSVQLAKRPQ---------------------VIVGTPGRIVYHIKNTKGV 152
Query: 188 --TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
++E + +LV+DE D+LL E F++ +L +T
Sbjct: 153 EESIEKVKFLVIDEADKLL-------------------EMDFANEIDYLIEKLPKQRTT- 192
Query: 246 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 305
M+ SAT++ KL + L HP+ + E +Y+ + L
Sbjct: 193 ------------------MLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEY 234
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
K + YL+++L+ + I+FT +L +L G I + G Q
Sbjct: 235 CFIPFKYRDGYLISILKETEGKTIIIFTMKCSGCTKLVMMLRQMGYAAIPL---HGKMSQ 291
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+
Sbjct: 292 QKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRVGRTARAGK 351
Query: 426 LGRCFTLLHKDEV---KRFKKLLQKADND 451
G TL+ + + +R + +++K N+
Sbjct: 352 SGYAITLVTQYSIELYQRIETMIEKKLNE 380
>gi|312067818|ref|XP_003136922.1| Ddx49-A-prov protein [Loa loa]
Length = 478
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 176/404 (43%), Gaps = 110/404 (27%)
Query: 31 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 90
+ TG+GKTL++ LPI+ L+ + ALV+ PTR+LA+Q+
Sbjct: 87 AKTGTGKTLAFGLPILHELAIDPY-GICALVLTPTRELAIQIG----------------- 128
Query: 91 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 150
D FAA+ +GL +G+ VG + ++L +RP
Sbjct: 129 ----------------------DQFAALGTPIGLKIGIVVGGKDRVAQGNDLARRPH--- 163
Query: 151 GICYDPEDVLQELQSAVDILVATPGRLMDHINA---TRGFTLEHLCYLVVDETDRLLREA 207
I+VATPGRL DH+ + G + L +LV+DE DRLL
Sbjct: 164 ------------------IVVATPGRLADHLESDSENTGKLFKKLRFLVLDEADRLLDGQ 205
Query: 208 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 267
Y L T+L FLP +L + S
Sbjct: 206 YSIELKTIL---------------NFLPKQRQTL-----------------------LFS 227
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
AT+T ++L Q+ + P F ++ ++LE ++C +K YLV ++++ E+
Sbjct: 228 ATITSALSQLHQVSVKKPYFFED-KSEIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEK 286
Query: 328 K----CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 383
++F+ + L + + G ++ Q R+ +L FR G+I++L
Sbjct: 287 HPDSLILIFSHTCRECQALAIMFHGLG---FQVGSLHSQISQQERTSSLTKFRSGRIKIL 343
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
+ +D +RG+D+ V+ V+N++ P KTYIHR GR+ARAG+ G
Sbjct: 344 ICTDVASRGLDIPHVDLVINHNVPQNPKTYIHRVGRSARAGRFG 387
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 194/440 (44%), Gaps = 103/440 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
+ + + Q+++ L ++D+ + TGSGKTL++ LPI+Q L + AL++ PTR
Sbjct: 32 YKIPTPIQQQSLPYTLQKKDIIGLAETGSGKTLAFGLPILQHLLANP-QPYYALILSPTR 90
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
E+CVQ +++ F AI ++ L
Sbjct: 91 ----------------------------ELCVQ-----------IQEHFQAIGASIALKS 111
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ +G + L ++P I++ TPG+++ H+ T+G
Sbjct: 112 VVILGGMDPLAQAKALAQKPH---------------------IIIGTPGKILYHLENTKG 150
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L+ L +LV+DE D+LL ++ + +L + + +T+L
Sbjct: 151 FNLKQLKFLVLDEADKLLNMDFEREINAILDIIPKER-------NTYL------------ 191
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T +KL + L P+ + ++Y+ L+ L
Sbjct: 192 -------------------FSATMTNKVSKLQRASLKDPVKIEVS-SKYQTVSTLQQNYL 231
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K YLV LL L IVF ++ + ++ LL + G I I G Q+
Sbjct: 232 FVPDKYKETYLVYLLNELAGLTSIVFVATCQMAIKITLLLRNLGFQAIAI---HGQMSQA 288
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R + F+ + +L+++D +RG+D+ V+ V+N+D P K Y+HR GRTARAG+
Sbjct: 289 KRLSSFNKFKSKESNLLIATDVASRGLDIPFVDLVLNFDIPQNAKEYVHRVGRTARAGKS 348
Query: 427 GRCFTLLHKDEVKRFKKLLQ 446
G+ +L+ + +V+ ++K+ Q
Sbjct: 349 GKAISLVTQYDVEMYQKIEQ 368
>gi|440299556|gb|ELP92108.1| ATP-dependent rRNA helicase rrp3, putative [Entamoeba invadens IP1]
Length = 433
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 185/436 (42%), Gaps = 104/436 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 70
+ +I L +D+ + TGSGKT ++ LP++ L +N R +VV PTR+LA
Sbjct: 39 IQSSSIPVALKRKDIIGIAQTGSGKTAAFLLPMLNHLLNTNERKRDFFCIVVEPTRELAA 98
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
QV +V D A P GL L V
Sbjct: 99 QV------------------------------------IEVLDRMAEALP--GLVSCLLV 120
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT-- 188
G + L K+P +++V TPGRL+ HIN T+G +
Sbjct: 121 GGMDEMKQAVLLAKKP---------------------NVIVCTPGRLVYHINNTKGVSQS 159
Query: 189 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 248
L+ +LV+DE D+LL + A
Sbjct: 160 LQKTRFLVIDEADKLLDMDFAA-------------------------------------D 182
Query: 249 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLIC 308
+++ + P R M+ SAT++ KL + L HP+ + E +Y + L L
Sbjct: 183 IDKLIESVPKQR-TTMLFSATMSSRVEKLQRASLVHPVKIKQSEQKYSTVDTLRQEYLFI 241
Query: 309 ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 368
K + YL+A+LQ +G + I+FT RL +L G I + +G Q R
Sbjct: 242 PFKYRDGYLMAILQKVGAQSAIIFTMKCSGNTRLVLMLRQLGYEAIPL---NGKMSQQKR 298
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 428
L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G
Sbjct: 299 LLALEKFKSGKRSLLVATDVASRGLDIPDVDFVINYDCPVEPKDYIHRVGRTARAGKSGM 358
Query: 429 CFTLLHKDEVKRFKKL 444
T++ + ++ ++++
Sbjct: 359 AITIVTQYSLEFYQRI 374
>gi|325179957|emb|CCA14359.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 843
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 197/460 (42%), Gaps = 116/460 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAVRCLRALVVLPTRDLAL 70
+ + I L +D+C ++ TGSGKT ++ LPI++ L R + R +++ P R+LA
Sbjct: 242 IQEYAIPMALLGKDICASAQTGSGKTAAFLLPILERLQLRTRRIAATRVIIICPVRELAT 301
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
Q S + I L + D+ +A L V
Sbjct: 302 QCQS-----------------------------VLIKLARFTDITSA----------LVV 322
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G G+ +++ EL++ DI+V TPGR++DH+ + L+
Sbjct: 323 G-------------------GLPLKAQEL--ELRTCPDIIVCTPGRMIDHLRNSPSVHLD 361
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
L LV+DE DRLL + + + +R C
Sbjct: 362 SLEILVLDEADRLLELGFTEEIQEI----------------------------VRMC--- 390
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL-ESYKLICE 309
P R M+ SAT+T ++L L + P+ + + Y + + L + + I
Sbjct: 391 ------PRARQT-MLFSATMTSKIDQLIALSMKRPVRIC-ADPLYDMSKHLVQEFVRIRP 442
Query: 310 SKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
++ + L+AL +K IVF + HR+ L FG IK E G Q
Sbjct: 443 NREADRDAILLALCTRAFTQKTIVFMETKVHAHRMMIL---FGLSGIKAAELHGNLTQQE 499
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R L+ FR+G + +L+ +D RG+DV+GV V+NY+ P I TY+HR GRTARAGQ+G
Sbjct: 500 RLDALEKFRQGAVDILLCTDVAARGIDVKGVRAVINYEMPKDITTYVHRVGRTARAGQVG 559
Query: 428 RCFTLLHKDEVKRFKKLLQKADNDSC----PIHSIPSSLI 463
R TL +++L+ K C ++P S+I
Sbjct: 560 RAVTL-----TSEYRRLIMKQVTRHCHGFAKSRAVPDSVI 594
>gi|426197762|gb|EKV47689.1| hypothetical protein AGABI2DRAFT_185614 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 135/282 (47%), Gaps = 44/282 (15%)
Query: 157 EDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 213
ED +Q+ L I+VATPGRL DH+N+T+GF+L L +LV+DE DRLL +Q +
Sbjct: 104 EDRVQQAVRLAKKPHIIVATPGRLHDHLNSTKGFSLRQLKHLVLDEADRLLDLEFQLQIT 163
Query: 214 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 273
+L+ + ST+L SAT+T +
Sbjct: 164 EILRAIPRER-------STYL-------------------------------FSATMTAN 185
Query: 274 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 333
KL + L P+ + +YK L Y ++C K + LV L+ S+ + IVF
Sbjct: 186 VTKLQRASLTDPVRVDVSSFKYKTVSTLLQYYVLCPLVNKEVMLVYLINSMAQNTIIVFV 245
Query: 334 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
+V RL +L L + G QS R F+ GK +LV++D +RG+
Sbjct: 246 RTVADAKRLSIVLR---TLEFQAVPLHGELSQSQRLGAFNRFKSGKSNILVATDLASRGL 302
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 435
DV V+ V+NYD P K Y+HR GRTARAG+ G+ ++ +
Sbjct: 303 DVANVDVVINYDTPTSSKDYVHRVGRTARAGRAGKSILMVSQ 344
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 49
P Q+ E I P L RD+ +PTGSGKT+++ALPI+ L
Sbjct: 27 PTQIQA--ECIPPALSGRDIIGIAPTGSGKTIAFALPILHRL 66
>gi|393910350|gb|EFO27145.2| Ddx49-A-prov protein [Loa loa]
Length = 509
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 176/404 (43%), Gaps = 110/404 (27%)
Query: 31 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 90
+ TG+GKTL++ LPI+ L+ + ALV+ PTR+LA+Q+
Sbjct: 87 AKTGTGKTLAFGLPILHELAIDPY-GICALVLTPTRELAIQIG----------------- 128
Query: 91 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 150
D FAA+ +GL +G+ VG + ++L +RP
Sbjct: 129 ----------------------DQFAALGTPIGLKIGIVVGGKDRVAQGNDLARRPH--- 163
Query: 151 GICYDPEDVLQELQSAVDILVATPGRLMDHINA---TRGFTLEHLCYLVVDETDRLLREA 207
I+VATPGRL DH+ + G + L +LV+DE DRLL
Sbjct: 164 ------------------IVVATPGRLADHLESDSENTGKLFKKLRFLVLDEADRLLDGQ 205
Query: 208 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 267
Y L T+L FLP +L + S
Sbjct: 206 YSIELKTIL---------------NFLPKQRQTL-----------------------LFS 227
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
AT+T ++L Q+ + P F ++ ++LE ++C +K YLV ++++ E+
Sbjct: 228 ATITSALSQLHQVSVKKPYFFED-KSEIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEK 286
Query: 328 K----CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 383
++F+ + L + + G ++ Q R+ +L FR G+I++L
Sbjct: 287 HPDSLILIFSHTCRECQALAIMFHGLG---FQVGSLHSQISQQERTSSLTKFRSGRIKIL 343
Query: 384 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
+ +D +RG+D+ V+ V+N++ P KTYIHR GR+ARAG+ G
Sbjct: 344 ICTDVASRGLDIPHVDLVINHNVPQNPKTYIHRVGRSARAGRFG 387
>gi|425780841|gb|EKV18837.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
gi|425783078|gb|EKV20947.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
Length = 809
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 141/266 (53%), Gaps = 24/266 (9%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DLCI++ TGSGKTLSY LP+V L R+ LR L+V+PTR+L Q + C+ C
Sbjct: 276 DLCISAATGSGKTLSYVLPLVTALPPRSASRLRGLIVVPTRELVKQARES-CELCASGSR 334
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
I ++ + ++ + L + + QV + GL+ G S+ D ISE I
Sbjct: 335 LHIGS-AVGNVAIKDEQKLLMRMDQVYNPAIQQQQRDGLN-GNDWMNLSLEDCISEAI-- 390
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
G +Q + VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DRLL
Sbjct: 391 -----GSNGSLPGHIQRSEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADRLLN 445
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
E++Q W+ V+ ++ N TF P K + G+ KP PR K++
Sbjct: 446 ESFQEWVDVVM-----NSLNSREAPETFGPGG----KVLSELGL--SIDAKP-PR--KVI 491
Query: 266 LSATLTQDPNKLAQLDLHHPLFLTTG 291
LSAT+T+D +KL L L +P + G
Sbjct: 492 LSATMTRDISKLNSLRLVNPKMVIIG 517
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Query: 329 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
++FT S ES RL L++ L ++ + S KTL A+R+G+I V+V++D
Sbjct: 647 VLIFTKSSESASRLARLISLLHPALAKRVGTIIKSNKSSASRKTLTAYRQGRISVIVATD 706
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+RG+D++ + +V+NYD P I TY+HR GRTARAG+ G ++L+ E + F
Sbjct: 707 RASRGLDLQSLTHVINYDIPTSITTYVHRVGRTARAGRAGSAWSLVAHREGRWF 760
>gi|167384217|ref|XP_001736854.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165900561|gb|EDR26857.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 188/440 (42%), Gaps = 112/440 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ + +I L ++D+ + TGSGKT S+ LP++Q L NRA C+ ++ PTR+
Sbjct: 35 IQENSIPVALQKKDIIGIAQTGSGKTASFLLPMIQHLLNVKEKNRAFYCI---IIEPTRE 91
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GLSV 126
LA QV +V I A+ GL
Sbjct: 92 LA---------------------------------------AQVVEVLDEIGKALPGLMS 112
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
L VG + + +L KRP ++V TPGR++ HI T+G
Sbjct: 113 CLLVGGMDVMKQSVQLAKRP---------------------HVIVGTPGRIVYHIKNTKG 151
Query: 187 F--TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+++ + +LV+DE D+LL E F++ +L S +T
Sbjct: 152 VEESIQKVKFLVIDEADKLL-------------------EMDFANEIDYLIEKLPSQRTT 192
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
M+ SAT++ KL + L HP+ + E +Y+ + L
Sbjct: 193 -------------------MLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQE 233
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
K + YL+++L+ + I+FT +L +L G I + G
Sbjct: 234 YCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPL---HGKMS 290
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG
Sbjct: 291 QQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAG 350
Query: 425 QLGRCFTLLHKDEVKRFKKL 444
+ G TL+ + ++ ++++
Sbjct: 351 KSGYAITLVTQYSIELYQRI 370
>gi|115400041|ref|XP_001215609.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
gi|114191275|gb|EAU32975.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
Length = 360
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 132/271 (48%), Gaps = 43/271 (15%)
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L+L
Sbjct: 64 VIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRL---------- 113
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
LP K K Y + SAT++ L + L P+ +
Sbjct: 114 -----LP------------------KRKTY------LFSATMSSKVESLQRASLSDPVRV 144
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
+ + L+SY L K K YLV LL + I+FT +V T RL +L +
Sbjct: 145 SVSTKNQTASKLLQSY-LFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRN 203
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G I I G QS R +L FR +L+++D RG+D+ V+ V+NYD P
Sbjct: 204 LGFPAIPI---HGQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQ 260
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
KTYIHR GRTARAG+ G F+ + + EV+
Sbjct: 261 DSKTYIHRVGRTARAGKSGIAFSFVTQYEVE 291
>gi|307214659|gb|EFN89598.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 377
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 164/337 (48%), Gaps = 63/337 (18%)
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
Q+ + F A+ ++G+ + VG ++ + L K+P I
Sbjct: 26 QISEQFEALGSSIGVKCAVLVGGMDMSAQALLLSKKP---------------------HI 64
Query: 170 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 229
++ TPGRL+D++ T+GF+L++L +LV+ E DR+L ++ + +L++
Sbjct: 65 IITTPGRLVDYLENTKGFSLQNLKFLVMGEADRILNMDFEIEVDKILRV----------- 113
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 114 ----IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVE 146
Query: 290 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
T+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL +
Sbjct: 147 VS-TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNL 205
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
G + + G Q+ R L F+ +L+S+D +RG+D+ V+ V+N+D P +
Sbjct: 206 GFTAVPL---HGQMSQNKRIAALTKFKARNRSILISTDVASRGLDIPHVDIVINFDIPTH 262
Query: 410 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
K YIHR GRTARAG+ GR T + + +V+ ++++ Q
Sbjct: 263 SKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRIEQ 299
>gi|167375363|ref|XP_001733609.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165905196|gb|EDR30262.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 188/440 (42%), Gaps = 112/440 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ + +I L ++D+ + TGSGKT S+ LP++Q L NRA C+ ++ PTR+
Sbjct: 35 IQENSIPVALQKKDIIGIAQTGSGKTASFLLPMIQHLLNVKEKNRAFYCI---IIEPTRE 91
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GLSV 126
LA QV +V I A+ GL
Sbjct: 92 LA---------------------------------------AQVVEVLDEIGKALPGLMS 112
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
L VG + + +L KRP ++V TPGR++ HI T+G
Sbjct: 113 CLLVGGMDVMKQSIQLAKRP---------------------HVIVGTPGRIVYHIKNTKG 151
Query: 187 F--TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+++ + +LV+DE D+LL E F++ +L S +T
Sbjct: 152 VEESIQKVKFLVIDEADKLL-------------------EMDFANEIDYLIEKLPSQRTT 192
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
M+ SAT++ KL + L HP+ + E +Y+ + L
Sbjct: 193 -------------------MLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQE 233
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
K + YL+++L+ + I+FT +L +L G I + G
Sbjct: 234 YCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPL---HGKMS 290
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG
Sbjct: 291 QQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAG 350
Query: 425 QLGRCFTLLHKDEVKRFKKL 444
+ G TL+ + ++ ++++
Sbjct: 351 KSGYAITLVTQYSIELYQRI 370
>gi|404258993|ref|ZP_10962307.1| putative ATP-dependent RNA helicase [Gordonia namibiensis NBRC
108229]
gi|403402387|dbj|GAC00717.1| putative ATP-dependent RNA helicase [Gordonia namibiensis NBRC
108229]
Length = 540
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 185/432 (42%), Gaps = 103/432 (23%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSN---RAVRCL----RALVVLPTRDLALQVNSARCK 78
DL + TG GKT + +P++ L+N VR L RAL+++PTR
Sbjct: 57 DLIGQARTGMGKTYGFGIPLLHRLANAEASGVRPLDNTPRALIIVPTR------------ 104
Query: 79 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 138
E+CVQ S L I+ DV ++AD
Sbjct: 105 ----------------ELCVQVTSDLEIAAKNT-DV-------------------TLADG 128
Query: 139 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVV 197
+ ++K + G Y+ + + ELQS VD++V TPGRL+D A +G L + LV+
Sbjct: 129 TNRMLKITSIYGGRPYEAQ--IAELQSGVDVVVGTPGRLLDL--AQQGHLVLGKVSILVL 184
Query: 198 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 257
DE D +L FLP +ER P
Sbjct: 185 DEADEMLDLG-------------------------FLPD------------IERIMAALP 207
Query: 258 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLY 316
PR M+ SAT+ LA+ LH P + + +R + Y + K
Sbjct: 208 TPRQT-MLFSATMPGPIVTLARTFLHRPTHIRAENANDSAVHDRTKQYAYRAHALDKAEL 266
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 376
+ +LQ+ G ++FT + + ++ L G K+ G Q R K L FR
Sbjct: 267 VARILQAEGRGATMIFTRTKRTAQKVADDLAERG---FKVGAVHGDLGQVAREKALGRFR 323
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
+G I VLV++D RG+D++ V +V+NY P KTY+HR GRT RAG+ G TL+ D
Sbjct: 324 DGTIDVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWD 383
Query: 437 EVKRFKKLLQKA 448
E+ R+ +L+ KA
Sbjct: 384 ELHRW-ELIDKA 394
>gi|449684384|ref|XP_002156411.2| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Hydra magnipapillata]
Length = 544
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 190/444 (42%), Gaps = 101/444 (22%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + TI L +DLC + TGSGKT ++ LPI++ L + + ++L
Sbjct: 16 FEHPTKIQSSTIPIALLGKDLCACATTGSGKTAAFMLPILERLLFKPKQTAXTKILLV-- 73
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+ CKN CV V V ++A + +
Sbjct: 74 ------------FICKN------------FCVX-----------VYSVSESLAKFSNIQL 98
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
GLA G + + L K P D+++ATPGRL+DH++ T
Sbjct: 99 GLATGGLDSRSQEAILRKNP---------------------DVVIATPGRLIDHLHNTPS 137
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
F L+ + LV+DE DR+L E + + + IR
Sbjct: 138 FNLQTIEILVLDEADRMLEEHFHDQMKEI----------------------------IRL 169
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
C P R M+ SAT+T + N L L L++P+ L + + +
Sbjct: 170 C---------PRGRQT-MLFSATMTDEVNALMSLSLNNPVKLFVDQNTDVASSLHQEFVR 219
Query: 307 ICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
I ++ + +VAL ++ +VF + H+L + FG +K E G
Sbjct: 220 IRSTREADRLAVVVALCCRSFNQQTLVFLQTKVLAHKLRIIFGLFG---LKAAELHGNLT 276
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R + L+ F+ ++ +LV++D RG+D+ GV V++++ P IK+YIHR GRTARAG
Sbjct: 277 QLQRLEALEKFKNNEVDILVATDLAARGLDIVGVKTVISFNMPTTIKSYIHRVGRTARAG 336
Query: 425 QLGRCFTLLHKDEVKRFKKLLQKA 448
+ GR TL+ + E K K++++ A
Sbjct: 337 KAGRSITLVGEKERKMLKEVVKNA 360
>gi|441514562|ref|ZP_20996379.1| putative ATP-dependent RNA helicase [Gordonia amicalis NBRC 100051]
gi|441450631|dbj|GAC54340.1| putative ATP-dependent RNA helicase [Gordonia amicalis NBRC 100051]
Length = 536
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 196/465 (42%), Gaps = 103/465 (22%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCL----RALVVLP 64
A+ + T+ L DL + TG GKT + +P++ L++ VR L RAL+++P
Sbjct: 43 AIQELTLPLALEGHDLIGQARTGMGKTFGFGIPLLHRLAHAEASGVRPLDNTPRALIIVP 102
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR E+CVQ L ++ P +
Sbjct: 103 TR----------------------------ELCVQVTGDLQVAAPSL------------- 121
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
+ ++AD +K + G Y+ + + ELQS VD++V TPGRL+D A
Sbjct: 122 -------EVTLADGTRRPLKVTSIYGGRPYEAQ--IAELQSGVDVVVGTPGRLLDL--AQ 170
Query: 185 RG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
+G L + LV+DE D +L FLP
Sbjct: 171 QGHLVLGKVSILVLDEADEMLDLG-------------------------FLPD------- 198
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLE 302
+ER P PR M+ SAT+ LA+ LH P + + +R +
Sbjct: 199 -----IERIMSALPTPRQT-MLFSATMPGPIVTLARTFLHRPTHIRAENANDSAVHDRTK 252
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
Y + K + +LQ+ G +VFT + + ++ + E K+ G
Sbjct: 253 QYAYRAHALDKAELVARILQADGRGATMVFTRTKRTAQKVA---DDLAERGFKVGAVHGD 309
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R K LK FR+G I VLV++D RG+D++ V +V+NY P KTY+HR GRT R
Sbjct: 310 LGQIAREKALKRFRDGAIDVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIGRTGR 369
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
AG+ G TL+ DE+ R+ +L+ KA P + S E LR
Sbjct: 370 AGRTGIAVTLVDWDELHRW-ELIDKALGLGIPDPAETYSTSEHLR 413
>gi|325189223|emb|CCA23746.1| DEAD box helicase putative [Albugo laibachii Nc14]
Length = 809
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 195/459 (42%), Gaps = 106/459 (23%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR--------A 59
P+Q+ + I GL +RD+ + TGSGKT ++ +PI+ L + L A
Sbjct: 375 PIQM----QAIPIGLAKRDIIGIAETGSGKTAAFLIPIIAYLYHLPAVMLERTGEQGPLA 430
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
L++ PTR+LALQ+ K C G++ +
Sbjct: 431 LIMAPTRELALQIEQEAIKLCKHTQVGVVGSQNRIRT----------------------- 467
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
LSV VG SI ED +L+ VDI++ TPGRLMD
Sbjct: 468 ----LSV---VGGQSI---------------------EDQAFKLRQGVDIIIGTPGRLMD 499
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ----LTRSDNENRFSDASTFLP 235
+ + L Y+V+DE DR++ ++ + VL L +S+NE
Sbjct: 500 CME-SHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLDNMGSLLKSENEEEMEKQ----- 553
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
+ER + + V M+ SAT+ + +LA+ L HP + G+
Sbjct: 554 -------------LERANNAQEFRYRVTMMFSATMPTEVERLAKTYLRHPAIIKIGDEDS 600
Query: 296 KLPERLESYKLICESKLKPLYLVALLQ----SLGE------------EKCIVFTSSVEST 339
+R+E + S K L L LL S G+ +K +VF + +
Sbjct: 601 GKNKRIEQRVVFLNSGKKKLRLQHLLHETLSSSGQVRISRKEKVVDGQKVMVFVNIKKEC 660
Query: 340 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
L L G R I G + Q R ++L+ FREG VLV++D RG+D+ V
Sbjct: 661 DVLGKYLAQEG-FRTTI--LHGGKSQEQREESLRGFREGFCDVLVATDVAGRGLDIPDVT 717
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDE 437
+VVNYD P+ I+ Y HR GRT RAG+ G + L ++DE
Sbjct: 718 HVVNYDLPSKIENYCHRIGRTGRAGKEGVAISFLTNEDE 756
>gi|119185891|ref|XP_001243552.1| hypothetical protein CIMG_02993 [Coccidioides immitis RS]
gi|392870252|gb|EAS32044.2| ATP-dependent RNA helicase dbp6 [Coccidioides immitis RS]
Length = 809
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 165/347 (47%), Gaps = 55/347 (15%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G S PVQ AV + D+C+++ TGSGKTLSY LP++ T+ V LR L
Sbjct: 264 QGYSKAMPVQSAVLPLALK-SEHRGDICVSAATGSGKTLSYVLPLISTIEPSPVSQLRGL 322
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+++PTR+L Q + C+ C GL ++ ++ + + QV + F A
Sbjct: 323 IIVPTRELVKQARNT-CELCAAGT-GLRIGTAVGSTALKDEQSALMGQEQVYN-FQAWK- 378
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
G + G ++ E + K G + + +DILV+TPGRL+DH
Sbjct: 379 --GKFSSVMTGSDWTNFDLQEYVAEAKECRGAL---PNHFAKTSPNIDILVSTPGRLVDH 433
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I +T+GFTL+HL +LV+DE D+LL E++Q W TVLQ E++ +D + +P S
Sbjct: 434 IRSTKGFTLKHLKWLVIDEADKLLNESFQEWSQTVLQAV----ESKGNDDAHPVPKDLCS 489
Query: 241 L---KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP------------ 285
L +TIR K++LSAT+T+D KL L L +P
Sbjct: 490 LPKEQTIR-----------------KIILSATMTRDITKLNSLRLINPKLVEVRALDNSK 532
Query: 286 -----LFLTTGETR---YKLPERL-ESYKLICESKLKPLYLVALLQS 323
L TR Y+LP L E + + KPLYL+ L+ S
Sbjct: 533 GMLPSLLTRPPNTRFEGYQLPPTLNEMFVPAGDGSDKPLYLLELMAS 579
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%)
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
+ S KTL A+R+GKI V+V++D +RG+D+ +++V++YD P + +YIHR GRTAR
Sbjct: 675 NKSSTARKTLAAYRQGKIPVVVATDRASRGLDLPALDHVISYDVPTSVTSYIHRVGRTAR 734
Query: 423 AGQLGRCFTLLHKDEVKRFKKLLQKA 448
AG+ G +TL+ +E + F + K
Sbjct: 735 AGRRGVAWTLVAHNEGRWFSNEIVKG 760
>gi|302917131|ref|XP_003052376.1| hypothetical protein NECHADRAFT_1180 [Nectria haematococca mpVI
77-13-4]
gi|256733315|gb|EEU46663.1| hypothetical protein NECHADRAFT_1180 [Nectria haematococca mpVI
77-13-4]
Length = 768
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 196/436 (44%), Gaps = 109/436 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+G + P+Q ++I L +DL + TGSGKT ++ +PI++ L R + R
Sbjct: 273 VGFTKPTPIQ----SKSIPIALMGKDLVGGAVTGSGKTGAFIVPILERLLYRPKKIPTTR 328
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+V+ PTR+LA+Q C H++A + + F
Sbjct: 329 VVVLTPTRELAIQ---------C---------HAVATKLAAYTDIKFT------------ 358
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
LAVG S+ + +EL RP D+++ATPGR +
Sbjct: 359 ---------LAVGGLSLKVQEAELRLRP---------------------DVIIATPGRFI 388
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ + F ++ + L++DE DR+L + + L +L T LP +
Sbjct: 389 DHMRNSASFNVDTVEILILDEADRMLEDGFADELNEIL---------------TTLPKSR 433
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ M+ SAT+T ++L ++ ++ P + + +
Sbjct: 434 QT-----------------------MLFSATMTSTVDRLIRVGMNKPARVMVDSQKKTVG 470
Query: 299 ERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + +L + K + YL + ++L E+ I+F + HR + FG L +
Sbjct: 471 TLVQEFVRLRPGREEKRMGYLAYICKTLYRERVIIFFRQKKEAHRARII---FGLLGLSC 527
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+HR
Sbjct: 528 AELHGSMNQTQRISSVEEFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHR 587
Query: 417 AGRTARAGQLGRCFTL 432
GRTARAG+ G TL
Sbjct: 588 VGRTARAGRKGTAITL 603
>gi|399077018|ref|ZP_10752254.1| DNA/RNA helicase, superfamily II [Caulobacter sp. AP07]
gi|398036112|gb|EJL29334.1| DNA/RNA helicase, superfamily II [Caulobacter sp. AP07]
Length = 663
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 191/453 (42%), Gaps = 118/453 (26%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRA-VRCLRA 59
G ++ P+Q A I L +D+ + TG+GKT ++ LP++ L S RA R RA
Sbjct: 21 GYTTATPIQAAA----IPVALAGQDVLGIAQTGTGKTAAFTLPMIDKLASGRAKARMPRA 76
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV+ PTR+LA QV S+ KY A
Sbjct: 77 LVIAPTRELADQVASSFEKY---------------------------------------A 97
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
LS L +G S D++ ++L VD+L+ATPGRL+D
Sbjct: 98 KGTKLSWALLIGGVSFGDQV---------------------KKLDRGVDVLIATPGRLLD 136
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H G + + +VVDE DR+L F+P
Sbjct: 137 HFERG-GLLMTGVQIMVVDEADRMLDMG-------------------------FIPD--- 167
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGET 293
+ER FK P P+ + SAT+ + +L + L P+ + TT E
Sbjct: 168 ---------IERIFKMTP-PKKQTLFFSATMPPEITRLTKQFLRDPVRIEASRPATTNEN 217
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
+L ++ S + K K L L AL++ E IVF + + L G
Sbjct: 218 ITQLMVKVPS----SDPKAKRLALRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHG--- 270
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
G QS R KTL AFR+G +++LV+SD RG+D+ V++V NYD P + Y
Sbjct: 271 FDAAAIHGDLDQSQRMKTLAAFRDGSLKILVASDVAARGLDIPAVSHVFNYDVPHHADDY 330
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
+HR GRT RAG+ G + L+ + K F K+++
Sbjct: 331 VHRIGRTGRAGRSGIAYMLVTPADDKGFDKVVK 363
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 187/426 (43%), Gaps = 105/426 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCK 82
+D+ + TGSGKT ++ +PI++ L + + R + +PTR+LA+Q C
Sbjct: 326 KDVVGGAETGSGKTAAFLIPILERLLYRQKKIPTTRVAIFMPTRELAVQ---------CF 376
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
N+ A F + F L G S ++ + L
Sbjct: 377 NV---------ATKLASFTDITF---------------------ALMAGGFSSREQEAVL 406
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
RP D+++ATPGR +DH++ T F +E+L LV+DE DR
Sbjct: 407 KTRP---------------------DVVIATPGRFIDHMHNTAAFQVENLEILVLDEADR 445
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
+L E +++ L +L T +P S +T
Sbjct: 446 MLEEGFESQLNEIL---------------TTIPK---SRQT------------------- 468
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP--LYLVAL 320
M+ SAT+T +KL ++ + P+ L + + + + + + K YL+ +
Sbjct: 469 -MLFSATMTSSVDKLIRIGMDKPVRLMVDAKKQTVKGLTQEFVRLRQGKEDKRLAYLMYI 527
Query: 321 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
+ + EK IVF + HR+ + G +K E G Q R + ++AFR GK
Sbjct: 528 CEKIYTEKVIVFFRQKKEAHRVRVVFALCG---LKASELHGNMSQEQRIQAVEAFRSGKS 584
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
L+++D +RG+D++ V+ V+NY+ P + Y+HR GRTARAG+ GR TL + + K
Sbjct: 585 SYLLATDVASRGLDIKNVSTVINYEAPQTHEIYLHRVGRTARAGRSGRACTLAAEPDRKV 644
Query: 441 FKKLLQ 446
K+ ++
Sbjct: 645 VKQAVK 650
>gi|167646708|ref|YP_001684371.1| DEAD/DEAH box helicase [Caulobacter sp. K31]
gi|167349138|gb|ABZ71873.1| DEAD/DEAH box helicase domain protein [Caulobacter sp. K31]
Length = 678
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 193/454 (42%), Gaps = 120/454 (26%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN-RA-VRCLRA 59
G ++ P+Q A I L +D+ + TG+GKT ++ LP++ L N RA R RA
Sbjct: 21 GYTTATPIQAAA----IPVALAGQDVLGIAQTGTGKTAAFTLPLIDKLMNGRAKARMPRA 76
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV+ PTR+LA QV S+ KY A
Sbjct: 77 LVIAPTRELADQVASSFEKY---------------------------------------A 97
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
LS L +G S D+ ++L VD+L+ATPGRL+D
Sbjct: 98 KGTKLSWALLIGGVSFGDQ---------------------EKKLDRGVDVLIATPGRLLD 136
Query: 180 HINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
H RG + + +LVVDE DR+L F+P
Sbjct: 137 HFE--RGKLLMTGVQFLVVDEADRMLDMG-------------------------FIPD-- 167
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGE 292
+ER FK P P+ + SAT+ + +L + L P+ + TT E
Sbjct: 168 ----------IERIFKMTP-PKKQTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNE 216
Query: 293 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
+L ++ S + K K L L AL++ E IVF + + L G
Sbjct: 217 NITQLMVKVPS----SDPKAKRLALRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHG-- 270
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
G QS R+KTL AFR+G +++LV+SD RG+D+ V++V NYD P +
Sbjct: 271 -FDAAAIHGDLDQSQRTKTLAAFRDGSLKILVASDVAARGLDIPAVSHVFNYDVPHHADD 329
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
Y+HR GRT RAG+ G + L+ + K F K+++
Sbjct: 330 YVHRIGRTGRAGRSGVTYMLVTPADDKGFDKVVK 363
>gi|54024485|ref|YP_118727.1| RNA helicase [Nocardia farcinica IFM 10152]
gi|54015993|dbj|BAD57363.1| putative RNA helicase [Nocardia farcinica IFM 10152]
Length = 518
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 197/464 (42%), Gaps = 117/464 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV--RCLRA 59
GI + FP+Q A + L +D+ PTGSGKTL++ LP++ L+ A R R
Sbjct: 49 GIDAPFPIQAATVPDA----LAGKDVLGRGPTGSGKTLAFGLPMLVRLAGNAAAPRRPRG 104
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV++PTR+LA Q+ E + +L
Sbjct: 105 LVLVPTRELAAQI----------------------ERALDEPAL---------------- 126
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
A+GL V VG + I + L + VD+L+ATPGRL D
Sbjct: 127 -ALGLRVASVVGGAPIKRQADRLAR---------------------GVDLLIATPGRLSD 164
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL---TRSDNENRFSDASTFLPS 236
I A L+ + +DE D + A +LP V +L T +D +
Sbjct: 165 LI-AQGAAALDDVSITALDEADHM---ADMGFLPQVTRLLDRTPADGQ------------ 208
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
+++ SATL + +KL + L +P+ +T
Sbjct: 209 --------------------------RLLFSATLDGEVDKLVKRYLRNPVTHSTAPPSAS 242
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ S+ L+ K ++A + + E I+F + RL L G I
Sbjct: 243 V--ATMSHHLLYVRKADKRAVIAEIAAR-EGLTILFVRTKHGADRLAKQLRAAG---IAA 296
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
G + Q+ R++TL AF +G + VLV++D RG+ V+G++ VV+ D PA K Y+HR
Sbjct: 297 GALHGGKAQNNRTRTLAAFADGSVPVLVTTDVAARGIHVDGISLVVHADPPAEPKAYLHR 356
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 460
AGRTARAG+ G TL+ +DE +K+ +KA D ++ P
Sbjct: 357 AGRTARAGEDGVVVTLVTEDERADVEKMTRKAGVDVVGVNVTPG 400
>gi|195149497|ref|XP_002015694.1| GL11206 [Drosophila persimilis]
gi|194109541|gb|EDW31584.1| GL11206 [Drosophila persimilis]
Length = 785
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 204/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF V++ + L G L I+ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVF---VQTKKQAHRLHILLGLLGIRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|377572295|ref|ZP_09801385.1| putative ATP-dependent RNA helicase [Gordonia terrae NBRC 100016]
gi|377530391|dbj|GAB46550.1| putative ATP-dependent RNA helicase [Gordonia terrae NBRC 100016]
Length = 539
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 201/482 (41%), Gaps = 116/482 (24%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCL----RALVVLP 64
A+ + T+ L DL + TG GKT + +P++ L++ VR L RALV++P
Sbjct: 43 AIQELTLPLALEGHDLIGQARTGMGKTFGFGIPLLHRLAHAEETGVRPLDNTPRALVIVP 102
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR E+CVQ L ++ P L
Sbjct: 103 TR----------------------------ELCVQVTGDLQVAAPS-------------L 121
Query: 125 SVGLAVGQSSIADEISELIKRP----KLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
V LA G+ KRP + G Y E + ELQS VD++V TPGRL+D
Sbjct: 122 EVTLADGR-----------KRPLKVTSIYGGRPY--ESQIAELQSGVDVVVGTPGRLLDL 168
Query: 181 INATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
A +G L + LV+DE D +L FLP
Sbjct: 169 --AQQGHLVLGKVSILVLDEADEMLDLG-------------------------FLPD--- 198
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLP 298
+ER P PR M+ SAT+ LA+ L+ P + +
Sbjct: 199 ---------IERIMSALPTPRQT-MLFSATMPGPIVTLARTFLNRPTHIRAENANDSAVH 248
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+R + Y + K + +LQ+ G ++FT + + ++ + E K+
Sbjct: 249 DRTKQYAYRAHALDKAELVARILQADGRGATMIFTRTKRTAQKVA---DDLAERGFKVGA 305
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G Q R K LK FR+G I VLV++D RG+D++ V +V+NY P KTY+HR G
Sbjct: 306 VHGDLGQVAREKALKRFRDGTIDVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIG 365
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR-----PVYKSG 473
RT RAG+ G TL+ DE+ R+ +L+ KA N P S E LR P K+G
Sbjct: 366 RTGRAGRTGIAVTLVDWDELHRW-ELIDKALNLGIPDPPETYSTSEHLRSDLSIPESKTG 424
Query: 474 DV 475
V
Sbjct: 425 RV 426
>gi|453382028|dbj|GAC83496.1| putative ATP-dependent RNA helicase [Gordonia paraffinivorans NBRC
108238]
Length = 565
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 185/432 (42%), Gaps = 103/432 (23%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSN---RAVRCL----RALVVLPTRDLALQVNSARCK 78
DL + TG GKT + +P++ L+N +R L RALV++PTR
Sbjct: 70 DLIGQARTGMGKTYGFGIPLLHRLANAEASGIRPLDNTPRALVIVPTR------------ 117
Query: 79 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 138
E+C+Q S L I+ + DV ++AD
Sbjct: 118 ----------------ELCIQVTSDLEIAARKT-DV-------------------TLADG 141
Query: 139 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVV 197
+ ++K + G Y E + ELQS VD++V TPGRL+D A +G L + LV+
Sbjct: 142 TNRMLKITSIYGGRPY--ESQIAELQSGVDVVVGTPGRLLDL--AQQGHLVLGKVAILVL 197
Query: 198 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 257
DE D +L FLP +ER P
Sbjct: 198 DEADEMLDLG-------------------------FLPD------------IERIMAALP 220
Query: 258 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLY 316
PR M+ SAT+ LA+ LH P + + +R + + K
Sbjct: 221 TPRQT-MLFSATMPGPIVTLARTFLHRPTHIRAENANDSAVHDRTTQFAYRAHALDKAEL 279
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 376
+ +LQ+ G ++FT + + ++ L G K+ G Q R K LK FR
Sbjct: 280 VARILQAEGRGATMIFTRTKRTAQKVADDLAERG---FKVGAVHGDLGQVAREKALKKFR 336
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
+G I VLV++D RG+D++ V +V+NY P KTY+HR GRT RAG+ G TL+ D
Sbjct: 337 DGSIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWD 396
Query: 437 EVKRFKKLLQKA 448
E+ R+ +L+ KA
Sbjct: 397 ELHRW-ELIDKA 407
>gi|198456267|ref|XP_001360280.2| GA15282 [Drosophila pseudoobscura pseudoobscura]
gi|198135552|gb|EAL24855.2| GA15282 [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 204/468 (43%), Gaps = 117/468 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 62
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 299
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
+ E +P+ L +L+ + C+VF V++ + L G L I+ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVF---VQTKKQAHRLHILLGLLGIRAGEL 433
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|357013998|ref|ZP_09078997.1| DEAD/DEAH box helicase domain-containing protein, partial
[Paenibacillus elgii B69]
Length = 406
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 178/420 (42%), Gaps = 104/420 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ E I L D+ + TG+GKTL++ALPI++ + N A ++AL+V PTR+LA+
Sbjct: 30 IQSEAIPVALAGHDIIAQAQTGTGKTLAFALPILENI-NPANPNVQALIVTPTRELAI-- 86
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
Q+ + AP GL V A G
Sbjct: 87 -------------------------------------QITEEIKRWAPLKGLRVLSAYG- 108
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
D E +++L+ + I+VATPGRL+DH+ L L
Sbjct: 109 --------------------GQDVERQIRKLEGNIHIIVATPGRLLDHLR-RETVQLHKL 147
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE D++L + +LP V+++ + PS
Sbjct: 148 SVLVLDEADQML---HMGFLPEVVEII------------SVTPS---------------- 176
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 312
R ++ SAT+ +LA+ + P+ + R L E +E + +
Sbjct: 177 -------RRQTLLFSATMPPRIRQLAKEYMRQPVEIEVKSKRVTLDE-IEQVVIQTTDRG 228
Query: 313 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 372
K L L + + EE + + R L+N E E G Q+ R + +
Sbjct: 229 K---LETLCKLIDEENPYLAMIFCRTKLRASKLMNELAERGYSCDELHGDLTQAKREQVM 285
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
K FRE KIQ+LV++D RG+DVEG+ +V NYD P ++YIHR GRT RAGQ G+ FT
Sbjct: 286 KRFREAKIQLLVATDIAARGLDVEGITHVFNYDIPHDAESYIHRIGRTGRAGQTGKAFTF 345
>gi|354616053|ref|ZP_09033745.1| DEAD/DEAH box helicase domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353219600|gb|EHB84147.1| DEAD/DEAH box helicase domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 471
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 181/442 (40%), Gaps = 107/442 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI F +Q T+ L D+ + TG GKTL + +P++Q LS +ALV
Sbjct: 31 GIERTFAIQSL----TLPLALAGDDVIGQARTGMGKTLGFGVPLLQRLSLPGDGTPQALV 86
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
V+PTR E+CVQ KD+ A
Sbjct: 87 VVPTR----------------------------ELCVQV----------AKDLTEA---- 104
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
G +G ++ + G Y+ + ++ LQ VD+++ TPGRL+D
Sbjct: 105 -GAHLG---------------VRTASIYGGRPYEAQ--IETLQQGVDVVIGTPGRLLDLA 146
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
R L + LV+DE D +L + LP + ++ R E R +
Sbjct: 147 EQQR-LVLGKVGTLVLDEADEMLDLGF---LPDIERILRMVPEKRQT------------- 189
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-RYKLPER 300
M+ SAT+ LA+ LH P + E + ER
Sbjct: 190 ----------------------MLFSATMPGPIINLARTFLHQPTHIRAEENDEGAIHER 227
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
+ S KP + +LQ+ G ++FT + + ++ + E
Sbjct: 228 TRQFVYRSHSLDKPELVAKVLQAEGRGLTMIFTRTKRTAQKVA---DDLAERGFAAAAVH 284
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R + L+AFR GKI VLV++D RG+DVE V +VVNY P KTY+HR GRT
Sbjct: 285 GDLGQGAREQALRAFRSGKIDVLVATDVAARGIDVEDVTHVVNYQTPDDQKTYVHRIGRT 344
Query: 421 ARAGQLGRCFTLLHKDEVKRFK 442
RAG+ G TL+ DE+ R+K
Sbjct: 345 GRAGKTGVALTLVDWDEIPRWK 366
>gi|378728301|gb|EHY54760.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 813
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 181/411 (44%), Gaps = 105/411 (25%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 83
D+ ++ TGSGKT ++ LPI++ L R V R +++PTR+LA+Q C N
Sbjct: 325 DVVGSAVTGSGKTAAFLLPILERLLYRPRKVPTTRVAILMPTRELAVQ---------CYN 375
Query: 84 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 143
+ A +F + F + VG + ++ + L
Sbjct: 376 V---------ATALARFTDITFAQV---------------------VGGFPLREQEAILK 405
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
KRP D+++ATPGR +DH+ + F +E++ LV+DE DR+
Sbjct: 406 KRP---------------------DVVIATPGRFIDHMRNSASFVVENIEILVLDEADRM 444
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L ++ L +L KTI P R
Sbjct: 445 LETGFEDELNEIL-------------------------KTI------------PKGRQT- 466
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI--CESKLKPLYLVALL 321
M+ SAT+T +KL ++ ++ P+ L+ + + ++ + + L+ L L
Sbjct: 467 MLFSATMTDSVDKLVRVGMNRPVRLSVDAKKSTVSGLVQEFVRLRPGRENLRLATLCVLC 526
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 381
++ E+ I+F + HR+ + FG L +K E G Q R + AFREGK
Sbjct: 527 KNFFTERTIIFFRQKKEAHRVRIV---FGLLGLKAGELHGSMSQEQRISAVNAFREGKTT 583
Query: 382 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
L+++D +RG+D++ V VVNY+ P + Y+HR GRTARAG+ GR T+
Sbjct: 584 HLLATDLASRGLDIKNVMTVVNYEAPQTHEIYLHRVGRTARAGRSGRACTI 634
>gi|242778909|ref|XP_002479334.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722953|gb|EED22371.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 836
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 166/354 (46%), Gaps = 64/354 (18%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
G S PVQ T+ P L + DLC+++ TGSGKTLSY LPI Q+L +V
Sbjct: 270 GYSEATPVQA-----TVIPLLLDEQHRHRGDLCVSASTGSGKTLSYVLPINQSLQRESVA 324
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNI-----FGLIADHSIAEMCVQFDSLLFISLPQ 110
LRALV++PTR+L Q A + C N+ G + + +++DS+ P+
Sbjct: 325 RLRALVIVPTRELVKQAREA-FEACGSNLRIGTAIGSVVLKDEQQKIIRWDSVYS---PE 380
Query: 111 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ +S A E L R ++ P+ +Q + +D+L
Sbjct: 381 ----------KYNADQQRTMSESDWA-EFDLLKYRDEVVRAGDLAPQ-YIQVARPNIDVL 428
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
++TPGRL+DHI T GF+L HL +LVVDE DRLL E++Q W+ ++ + D+
Sbjct: 429 ISTPGRLVDHIRQTEGFSLRHLQWLVVDEADRLLNESFQEWVSVLMGALDKEKTANIGDS 488
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
+ R G R + PYPR K++LSATLT D KL L L +P +
Sbjct: 489 ------------VLARIG--RPIQ-SPYPR--KVILSATLTNDITKLNSLRLENPKLVAI 531
Query: 291 G-------ETRYKL--------PERLESYKLICESKLKPLYLVALLQSLGEEKC 329
G E R K P +E + + + KP+YL+ LL + + K
Sbjct: 532 GSRNMDSNEERVKHEAEQFVLPPSLMEHFVPVGDGFEKPIYLMKLLLMINKSKW 585
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 318 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFR 376
VA + G ++FT S ES RL LL+ L +I S KTLK +R
Sbjct: 666 VASASNTGVTSVLIFTKSTESAARLSHLLSLMNPSLESQIGTIVKSNNSSSSRKTLKDYR 725
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
G+I ++V++D +RG+D+ G+ V+NYD P + TY+HR GRTARAG+ G+ +TL+
Sbjct: 726 AGRISIIVATDRASRGIDLVGLGGVINYDMPTSLTTYVHRVGRTARAGKSGQAWTLVEHR 785
Query: 437 EVKRFKKLLQKADN 450
E F+K++ K++N
Sbjct: 786 EGLWFQKVIVKSEN 799
>gi|47217410|emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 190/446 (42%), Gaps = 116/446 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVRCL 57
+GI PVQ E P + + C+ + TGSGKT ++ LP++Q LS + CL
Sbjct: 20 LGIHKPTPVQ-----ENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQKLSEDPYGIFCL 74
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
V+ PTR+LA Q IAE F
Sbjct: 75 ---VLTPTRELAYQ---------------------IAEQ------------------FRV 92
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+ +GL + VG + + SEL +P ++VATPGRL
Sbjct: 93 LGKPLGLRDCIVVGGMDMVSQASELSNQPH---------------------VVVATPGRL 131
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
DHI ++ F++ + +L++DE DRLL + + D T +P+
Sbjct: 132 ADHIRSSSTFSMSKIQFLIMDEADRLLEQGCTDFT---------------KDLETIMPAL 176
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYK 296
+T ++ SATLT +L + ++ P F + ETR
Sbjct: 177 PAKRQT--------------------LLFSATLTDTLQELKNIAMNKPFFWESKSETRT- 215
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGEL 352
+ L+ ++ K+K YLV L+Q+ ++ I+FT++ ++ L +L F
Sbjct: 216 -VDELDQRYILTPEKVKDAYLVHLIQTFTDQHDDWSIIIFTNTCKNCQILTMMLQQFNFP 274
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
I + + +Q R L F+ ++L+++D RG+D+ V V+N++ P K
Sbjct: 275 TISL---HSMMKQKQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLPKI 331
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEV 438
YIHR GRTARAG+ G TL+ + ++
Sbjct: 332 YIHRVGRTARAGRNGVSITLVTQYDI 357
>gi|145300478|ref|YP_001143319.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362912|ref|ZP_12963530.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853250|gb|ABO91571.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356685918|gb|EHI50537.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 417
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 175/424 (41%), Gaps = 107/424 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL----SNRAVRCLRALVVLPTRDLALQVNSARCKYC 80
RDL + TG+GKT ++ LP+++ L ++ R +RALV++PTR+LA+QV + +Y
Sbjct: 42 RDLMAGAQTGTGKTAAFVLPLLEQLMQHPASDTARPIRALVLVPTRELAVQVFDSVVRY- 100
Query: 81 CKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 140
GL+ L G SIA ++
Sbjct: 101 --------------------------------------GQGTGLTSALVYGGVSIAAQV- 121
Query: 141 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 200
+ LQ+ VD+L+ATPGRL+DH+ +LEHL +LV DE
Sbjct: 122 --------------------EALQAGVDLLIATPGRLLDHLRQG-ALSLEHLSHLVFDEA 160
Query: 201 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 260
DR+L + + +L+ +D + A T + F + + R P
Sbjct: 161 DRMLDMGFMDEIKALLKQIPADRQTLLFSA-TCDDNLFALSRVLLRD-----------PE 208
Query: 261 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVAL 320
L+++ P ++ ++ GE + L E L K
Sbjct: 209 LIEVA--------PRNTTAAEVEQRVYAVDGERKVALVEHLIKVK--------------- 245
Query: 321 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
G ++F+ + + +L L G I + G Q R K L AFR G +
Sbjct: 246 ----GWAPVLIFSRTRQGADKLAQQLGKAG---INALAFHGDLSQGAREKVLLAFRAGTL 298
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
Q LV++D RG+D+ +N V+N + P + Y+HR GRT RAG G TL ++
Sbjct: 299 QALVATDVAARGLDILDLNYVINLEFPFVAEDYVHRIGRTGRAGNKGLAITLFSPEDAPL 358
Query: 441 FKKL 444
+K+
Sbjct: 359 LEKV 362
>gi|402882297|ref|XP_003904684.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Papio anubis]
Length = 711
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 48/309 (15%)
Query: 163 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 222
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 251 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI------- 303
Query: 223 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 282
IR C R M+ SAT+T + LA + L
Sbjct: 304 ---------------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSL 332
Query: 283 HHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTH 340
+P+ + P + + I ++ + + ALL + ++FT + + H
Sbjct: 333 KNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAH 392
Query: 341 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
R+ LL G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV
Sbjct: 393 RMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 449
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--I 458
V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +
Sbjct: 450 VINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARIL 506
Query: 459 PSSLIESLR 467
P +I R
Sbjct: 507 PQDVILKFR 515
>gi|302833349|ref|XP_002948238.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
gi|300266458|gb|EFJ50645.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
Length = 836
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 205/452 (45%), Gaps = 108/452 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA- 59
+G + P+Q A I L RD+C ++ TGSGKT ++ALP ++ L +R R L A
Sbjct: 192 LGYKTPTPIQAAC----IPLALAGRDICGSAVTGSGKTAAFALPFLERLLHRP-RGLAAT 246
Query: 60 --LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
LV+ PTR+LA+Q+ HS+ E QF +
Sbjct: 247 YVLVLTPTRELAVQI------------------HSMIEKLAQFTDV-------------- 274
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+V L VG S++ + + L K P +++VATPGRL
Sbjct: 275 -------TVALIVGGLSLSVQAATLRKLP---------------------EVVVATPGRL 306
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ ++ LE L LV+DE DRLL ++ V+++ R + R T L SA
Sbjct: 307 IDHLRNSQSVGLEDLAVLVLDEADRLLEMGFR---DEVMEVVRCAPKKR----QTMLFSA 359
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
F D+ V+ ++S +L Q A P LT R K
Sbjct: 360 T--------------FSDQ-----VRDLVSLSLKQPVRLAADAARAAPKLLTQEIVRLKG 400
Query: 298 PERLESYKLICESKLKPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI-K 355
P + + +C VAL +S + IVF S+ + HRL L FG ++
Sbjct: 401 PAAAATKEAVC---------VALCSRSFSSGRTIVFCSTKQRAHRLKIL---FGLAKLPP 448
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
E G Q+ R ++L++FR G L+++D RG+D++GV VVNYD P ++TY+H
Sbjct: 449 AAELHGNMSQTARLESLESFRRGDTAYLLATDVAARGLDIQGVEVVVNYDAPRKLETYLH 508
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
R GRTARAG G TL+ + K+L ++
Sbjct: 509 RIGRTARAGAAGVAVTLVEDGDRPLLKELTRR 540
>gi|296803502|ref|XP_002842604.1| ATP-dependent RNA helicase dbp6 [Arthroderma otae CBS 113480]
gi|238838923|gb|EEQ28585.1| ATP-dependent RNA helicase dbp6 [Arthroderma otae CBS 113480]
Length = 836
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 171/349 (48%), Gaps = 61/349 (17%)
Query: 2 GISSLFPVQVAV-----WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 56
G + PVQ AV T PG D+C+++ TGSGKTL+Y LP+ L V
Sbjct: 271 GFTEALPVQSAVIPLLSKSSTRYPG----DVCVSAATGSGKTLAYVLPLFSGLERLPVAR 326
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
LRA++++PTR+L QV A C+ C GL ++ ++ + Q+ +
Sbjct: 327 LRAVIIVPTRELVKQVRDA-CELCSGG-SGLRIGTAVGSSALKDEQT------QIMEQNR 378
Query: 117 AIAPAVGLSVGLAVGQS--------SIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 168
A P S G + S+ D ++E+ + K P+ V+ E VD
Sbjct: 379 AYKPDSWTSGGNGSNKMTAEEWASFSLTDYVAEVEEYSKTL------PDHVI-ESSPCVD 431
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
IL+ TPGRL+DHI +T+GFTLE L +LV+DE DRLL E++Q W+ VL
Sbjct: 432 ILICTPGRLVDHIRSTKGFTLESLEWLVIDEADRLLNESFQEWVDIVLPALDG------V 485
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL-VKMVLSATLTQDPNKLAQLDLHHPLF 287
+ ST + K I C VE PR K+VLSAT+T+D KL L L +P
Sbjct: 486 EKSTCSGPLYQLTKGI-SCPVE--------PRWPQKVVLSATMTRDITKLNSLRLQNPKL 536
Query: 288 LT-----------TGE-TRYKLPERL-ESYKLICESKLKPLYLVALLQS 323
+T TG+ + + LP L ES L+ + KPLYL+ L++S
Sbjct: 537 VTVDAAEKGNAGLTGQDSNFALPSLLDESSILVGDGSEKPLYLLKLVRS 585
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFREGKI 380
QS + ++FT S E+ RL LL L KI + S + + A++ GKI
Sbjct: 656 QSTFQPSVLIFTKSSEAASRLSRLLTLIHPYLDGKIGTLIKSNKSSTSRRAISAYKRGKI 715
Query: 381 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 440
++++++D +RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E +
Sbjct: 716 RIIIATDRASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGTAWTLVTHSEGRW 775
Query: 441 FKKLLQKADNDSCPIHSI 458
FK + + + + P +I
Sbjct: 776 FKNEISRGNVNRAPGKTI 793
>gi|441639369|ref|XP_004090206.1| PREDICTED: probable ATP-dependent RNA helicase DDX27, partial
[Nomascus leucogenys]
Length = 786
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 48/309 (15%)
Query: 163 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 222
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 326 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI------- 378
Query: 223 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 282
IR C R M+ SAT+T + LA + L
Sbjct: 379 ---------------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSL 407
Query: 283 HHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTH 340
+P+ + P + + I ++ + + ALL + ++FT + + H
Sbjct: 408 KNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAH 467
Query: 341 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
R+ LL G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV
Sbjct: 468 RMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 524
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--I 458
V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +
Sbjct: 525 VINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARIL 581
Query: 459 PSSLIESLR 467
P +I R
Sbjct: 582 PQDVILKFR 590
>gi|390333392|ref|XP_783077.3| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Strongylocentrotus purpuratus]
Length = 734
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 52/315 (16%)
Query: 160 LQE--LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 217
LQE L+ DI++ATPGRL+DH++ F+L + L++DE DR+L E ++ + +++
Sbjct: 266 LQEAALRKGPDIVIATPGRLIDHLHNAPTFSLSSVEVLILDEADRMLDEFFEEQMKEIIK 325
Query: 218 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 277
+ C V R M+ SAT+T L
Sbjct: 326 M----------------------------CSVARQ----------TMLFSATMTDQVKDL 347
Query: 278 AQLDLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
A + L +P+ + E Y L + + E + + + AL + C+VF
Sbjct: 348 ALVSLKNPVRIFVNENTDVAYNLQQEFIRIRDNREGDREAI-VSALCCRNFHDHCMVFVQ 406
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
+ + HRL +L G L IK+ E G Q+ R + L+ F+E I +LV++D RG+D
Sbjct: 407 TKKQAHRLHVIL---GLLGIKVGELHGDLSQTKRMEMLRMFKEDLIDILVATDLAARGLD 463
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
+EGV V+N+ P K Y+HR GRTARAG+ GR +L + E + K+L+++A N P
Sbjct: 464 IEGVKTVINFTMPNSEKHYVHRVGRTARAGRSGRSVSLAGEKERRMLKELVKRAKN---P 520
Query: 455 IHS--IPSSLIESLR 467
+ S IP ++ R
Sbjct: 521 VKSRIIPQGVVAKYR 535
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPT 65
P+Q A TI L +D+C + TG+GKT ++ LP+V+ L + R LVV PT
Sbjct: 178 PIQSA----TIPVALLGKDICACAATGTGKTAAFMLPVVERLLYKPKQAPVTRVLVVTPT 233
Query: 66 RDLALQV-NSAR--CKY----CCKNIFGLIADHSIAEMCVQFDSLLFISLP 109
R+L +Q+ N +R C++ CC + GL D + E ++ + I+ P
Sbjct: 234 RELGVQIFNVSRQLCEFTNIECCLAVGGL--DIKLQEAALRKGPDIVIATP 282
>gi|170099199|ref|XP_001880818.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644343|gb|EDR08593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 187/440 (42%), Gaps = 116/440 (26%)
Query: 12 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 71
+VW+ IG +PTGSGKTL++A+PI+ L + + A V+ PTR+LA Q
Sbjct: 47 SVWKLVIGI----------APTGSGKTLAFAIPILHRLWDNP-QGYFACVLSPTRELAYQ 95
Query: 72 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL-SVGLAV 130
+++ F A+ A+G+ SV +
Sbjct: 96 ISAQ---------------------------------------FEALGAAMGVRSVVIVG 116
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G + +L ++P I+VATPGRL DH+N +
Sbjct: 117 GDDDRVQQAVQLAQKPH---------------------IIVATPGRLHDHLNFHTTQPII 155
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
HL V+DE DRLL +Q + ++Q +P RC
Sbjct: 156 HLGLQVLDEADRLLDLDFQREITEIMQ---------------SIPK--------ERC--- 189
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 310
+ SAT+T + +KL + L P+ + RY L + L+C
Sbjct: 190 ------------TYLFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLLQHYLLCPL 237
Query: 311 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 370
K + LV L+ SL + IVF +V L +L G + + G QS R
Sbjct: 238 VEKEVTLVYLINSLAQNLIIVFVRTVADAKCLSIILRSLGFEAVPLH---GELTQSQRLG 294
Query: 371 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 430
F+ GK ++LV++D +RG+DV V+ V+NYD P + K YIHR GRTARAG+ G+
Sbjct: 295 VFTRFKSGKSRILVATDVASRGLDVPNVDVVINYDVPTHSKDYIHRVGRTARAGRAGKSI 354
Query: 431 TLLHKDEVK---RFKKLLQK 447
++ + + + R +K+L +
Sbjct: 355 LMVTQYDAELMLRLEKVLNR 374
>gi|444731361|gb|ELW71716.1| putative ATP-dependent RNA helicase DDX27 [Tupaia chinensis]
Length = 735
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 198/471 (42%), Gaps = 132/471 (28%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG P+Q A I GL +D+C + TG+ R L
Sbjct: 202 MGFKQPTPIQKAC----IPVGLLGKDICACAATGT--------------------VTRVL 237
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V++PTR+L +QV H++ + QF S+
Sbjct: 238 VLVPTRELGIQV------------------HAVTKQLAQFCSI-------------TTCL 266
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
AVG GL V A L++A D+L+ATPGRL+DH
Sbjct: 267 AVG---GLDVKSQEAA--------------------------LRAAPDVLIATPGRLIDH 297
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
++ F L ++ L++DE DR+L E ++ + +
Sbjct: 298 LHNCPSFHLSNVEVLILDEADRMLDEYFEEQMKEI------------------------- 332
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 333 ---IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFL 379
Query: 301 LESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+ + I ++ + + ALL + ++FT + + HR+ +L G +++ E
Sbjct: 380 RQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHIVLGLMG---LQVGE 436
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR G
Sbjct: 437 LHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVG 496
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 467
RTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 497 RTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 544
>gi|300121162|emb|CBK21543.2| unnamed protein product [Blastocystis hominis]
Length = 627
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 193/450 (42%), Gaps = 108/450 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 58
MG ++ P+Q I L +D+C + TGSGKT +Y LPI++ L N A +R
Sbjct: 188 MGFTTPTPIQA----RCIPLALAGKDICAAAKTGSGKTAAYLLPILERLLYKNNAQNLIR 243
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
L+V PTR+LA QV H+IA ++ S+
Sbjct: 244 VLIVAPTRELAQQV------------------HTIATKLTKYTSI--------------- 270
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+ L VG + + +L +RP DI+V TPGR++
Sbjct: 271 ------TCCLVVGGLPLQAQAVDLQRRP---------------------DIVVCTPGRMI 303
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH++ + L+ + +++DE DRLL + L +L+L
Sbjct: 304 DHVHNSMSVDLDDVEVVILDEADRLLELGFTEELHELLRL-------------------- 343
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
C V+R ++ SAT+T D + L L L P+ + ++
Sbjct: 344 --------CPVKRQ----------TLLFSATMTDDVSDLISLSLQKPVRVFVDPVN-QVV 384
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+RL + + + L+ L++++ + + I+F E L G L +K E
Sbjct: 385 DRLVQFIRVKDESLRTAMLLSIITRHFKTETIIF---AERKAEAHLLHIILGLLGLKSAE 441
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G Q+ R + L F + ++ L+++D RG+D++GV V+N P TYIHR G
Sbjct: 442 LHGNLNQTQRLRALDRFSKKEVDFLIATDVAARGLDIKGVQTVINLHMPKEEATYIHRVG 501
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RTARAG GR T + +D KKL+++A
Sbjct: 502 RTARAGHAGRAVTFVEEDRRLLMKKLVKQA 531
>gi|330040429|ref|XP_003239908.1| DEAD box protein [Cryptomonas paramecium]
gi|327206834|gb|AEA39010.1| DEAD box protein [Cryptomonas paramecium]
Length = 396
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 181/438 (41%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + +TI L RD+ + TGSGKTL++ +PI+Q+L + + V++P+R
Sbjct: 22 FKYATKIQAKTIPYALKNRDILGYAQTGSGKTLAFVIPILQSLLKFQI-TFYSFVIVPSR 80
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA QV S I G+ +
Sbjct: 81 ELAFQVASY---------------------------------------IETIGYLFGIKI 101
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
GL A +IS + + P + ++ TPGRL+++ T
Sbjct: 102 GLLTSGIEYATQISIIKRSPHM---------------------MICTPGRLIEYTEKTDN 140
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
L+++ +V DE DRL + + +V++ N +F + F
Sbjct: 141 LFLKNIKKIVFDEADRLFQNDFDKKFLSVVE-----NLPKFKQSFLF------------- 182
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
SAT+T + KL ++ + +P+ + + +YK L +
Sbjct: 183 --------------------SATMTINIEKLKKISMSNPVKIKINK-KYKTVSTLVQNYI 221
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
K K YL + + I+F + ++ LL L K+ + G Q
Sbjct: 222 FMPFKSKNCYLSYICNEFSDCLAIIFVDTQICAEKIAVLLK---VLNFKVAYFHGKLSQD 278
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R+K L F+ KI++LVS+D +RG+D+ + ++NYD P Y + YIHR GRTARAG+
Sbjct: 279 KRAKILHDFKLKKIKILVSTDLASRGIDIPDIELIINYDIPLYTRDYIHRIGRTARAGKT 338
Query: 427 GRCFTLLHKDEVKRFKKL 444
GR L+ + ++ ++K+
Sbjct: 339 GRVINLVTQYDISSYQKI 356
>gi|388580558|gb|EIM20872.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 801
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 211/472 (44%), Gaps = 114/472 (24%)
Query: 15 QETIGP-GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-----LRALVVLPTRDL 68
Q+T+ P L +D+ + TGSGKT ++ LP+++ L R R LV+ PTR+L
Sbjct: 232 QKTVMPVALAGKDVVGQAVTGSGKTAAFILPVLERLMYRPKTSSKGGETRVLVLCPTREL 291
Query: 69 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 128
A Q C +++ + D S +CV GLS+ L
Sbjct: 292 AQQ-----CFEVGQSLSKFMGDISFC-LCVG-----------------------GLSLKL 322
Query: 129 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 188
Q L +RP D+++ATPGRL+DH+ + FT
Sbjct: 323 QEQQ---------LKQRP---------------------DVVIATPGRLIDHVRNSPSFT 352
Query: 189 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 248
L+ L L++DE DR+L + ++ L + ++ C
Sbjct: 353 LDALDILIMDEADRMLEDGFKDELDEI----------------------------VKEC- 383
Query: 249 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGETRYK-LPERLESYK 305
P R M+ SAT+T ++L +L L+ P LF+ ++ K L + +
Sbjct: 384 --------PKNRQT-MLFSATMTDKVDELVRLSLNKPVRLFVDPKKSTAKGLTQEFVRIR 434
Query: 306 LICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
++ LK L++L + +++ I+F S HR+ + FG + + +E G
Sbjct: 435 SNSKNDLKERTATLLSLCRRTFKQRTIIFFRSKALAHRMRIM---FGLMELNAEELHGDL 491
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R L+ F+ K L+++D +RG+D++GV V+N+D P I+ Y+HR GRTARA
Sbjct: 492 SQEQRLNALERFKNQKSDYLLATDLASRGLDIKGVETVINFDLPNQIEIYLHRVGRTARA 551
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKA---DNDSCPIHSIPSSLIESLRPVYKS 472
G GR +L+ + + K K +++++ DS +P+ ++ + + +S
Sbjct: 552 GTSGRSVSLIGETDRKMLKNIVKRSSAQSTDSIKHRIVPTDVLSDVAELVES 603
>gi|427792819|gb|JAA61861.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 696
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 199/441 (45%), Gaps = 107/441 (24%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPTRDLAL 70
+ TI L RD+ + TG+GKT ++ LP+++ L R + R LV++PTR+LA+
Sbjct: 151 IQSSTIPMALLGRDIYACAATGTGKTAAFMLPVLERLLFRPKQDVVTRVLVIVPTRELAV 210
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
QV + ++ QF +++ + L+
Sbjct: 211 QV------------------YQVSLQLAQFTNIM---------------------ITLSA 231
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 190
G + + + L K P DI++ATPGRL+DH+ T GF L
Sbjct: 232 GGLDLKAQEAALRKLP---------------------DIIIATPGRLIDHLENTPGFDLR 270
Query: 191 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 250
++ L++DE D++L E + + + + IR+C
Sbjct: 271 NIEVLILDEADKMLDETFASQMKEI----------------------------IRQCA-- 300
Query: 251 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGETRYKLPERLESYKLIC 308
P M+ SAT+T++ LA + L P LFL T L R E ++
Sbjct: 301 --------PTRQTMLFSATMTEEVKDLAAVSLQKPVKLFLNNN-TDVALNLRQEFVRIRP 351
Query: 309 ESK-LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
+ + + L AL+ + IVF + + HRL LL L ++ E G Q+
Sbjct: 352 QREGDREAILAALVCRTFHDHTIVFVQTKKLAHRLRVLLG---LLGARVDELHGNLNQAQ 408
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
R + L F+E ++ VLV++D + RG+D++ V V+N+ P ++ Y+HR GRTARAG+ G
Sbjct: 409 RLEALHRFKEMEVDVLVTTDLVARGLDIKDVKTVINFTLPHTVQHYVHRVGRTARAGKSG 468
Query: 428 RCFTLLHKDEVKRFKKLLQKA 448
R +++ + E K K+++++A
Sbjct: 469 RSVSMVGEQERKLLKEIVKQA 489
>gi|170095563|ref|XP_001879002.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646306|gb|EDR10552.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 654
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 180/433 (41%), Gaps = 114/433 (26%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRALVVLPTRDLALQVNSARCKYCC 81
+D+ + TGSGKTL++ +P+++ L R A L AL++ PTR+LA+Q
Sbjct: 39 KDVLGAAQTGSGKTLAFLVPVLEILYRRKWGAADGLGALIISPTRELAVQ---------- 88
Query: 82 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 141
IF DV +I S GL +G ++ DE
Sbjct: 89 --IF---------------------------DVLRSIGGYHSFSAGLVIGGKNLKDERDR 119
Query: 142 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 201
L S ++ILVATPGRL+ H++ T GF ++L LV+DE D
Sbjct: 120 L----------------------SRMNILVATPGRLLQHMDQTVGFDADNLQVLVLDEAD 157
Query: 202 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 261
R+L +Q L +L + LP + +L
Sbjct: 158 RILDMGFQKTLAALL---------------SHLPKSRQTL-------------------- 182
Query: 262 VKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLICESKLKPLYLV 318
+ SAT TQ + LA+L L P+++ + +P+ LE + +ICE K L
Sbjct: 183 ---LFSATQTQSVSDLARLSLKDPVYVGINVASSSTSTMPQNLEQHYVICELDKKLDVLW 239
Query: 319 ALLQSLGEEKCIVFTSSVEST----HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
+ +++ + K IVF SS + C + H G + + G Q+QS R
Sbjct: 240 SFIKTHLQSKIIVFMSSCKQVRFVFETFCKM--HPG---VPLLHLHGKQKQSARLTMYTK 294
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
F VL ++D RG+D V+ V+ D P TYIHR GRTAR G+ L
Sbjct: 295 FSSISHAVLFATDIAARGLDFPSVDWVLQMDAPEDADTYIHRVGRTARYESKGKALLFLM 354
Query: 435 KDEVKRFKKLLQK 447
E + K LQK
Sbjct: 355 PSEEEGMKVALQK 367
>gi|407927370|gb|EKG20264.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 363
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 150/330 (45%), Gaps = 61/330 (18%)
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
Q+ F A+ +G+ + VG + + L K P I
Sbjct: 21 QISQQFEALGSLIGVKCAVLVGGMDMTPQQIALGKNPH---------------------I 59
Query: 170 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 229
+VATPGRL+DH+ T+GF+L+ L YLV+DE DRLL + + +L++
Sbjct: 60 IVATPGRLLDHLENTKGFSLKQLKYLVMDEADRLLDLDFGPIIDKILKV----------- 108
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
LP K RR + SAT++ L + L +PL ++
Sbjct: 109 ----LP------KEGRRT----------------YLFSATMSSKVESLQRASLSNPLRVS 142
Query: 290 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
+ ++ L + L K K LYL+ LL + I+FT +V T R+ LL
Sbjct: 143 ISSSSHQTVSTLIQHFLFVPHKHKDLYLIHLLNDMIGHPTIIFTRTVNETQRIAILLRAL 202
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
G I + G QS R L F+ +LV++D RG+D+ V+ V+NYD P
Sbjct: 203 GFGAIPLH---GQLSQSARLGALGKFKAKTRDILVATDVAARGLDIPSVSYVINYDLPPD 259
Query: 410 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
KTY+HR GRTARAG+ G+ +++ + +V+
Sbjct: 260 SKTYVHRVGRTARAGKSGKAVSIVTQYDVE 289
>gi|170744521|ref|YP_001773176.1| DEAD/DEAH box helicase [Methylobacterium sp. 4-46]
gi|168198795|gb|ACA20742.1| DEAD/DEAH box helicase domain protein [Methylobacterium sp. 4-46]
Length = 499
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 199/473 (42%), Gaps = 116/473 (24%)
Query: 2 GISSLFPVQV-AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV------ 54
G + P+Q AV Q G RDLC + TG+GKT ++ALPI+ L++
Sbjct: 21 GYVTPTPIQAQAVPQAMAG-----RDLCGIAQTGTGKTAAFALPILHRLASETPQRRAPR 75
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
R R LV+ PTR+LA Q IAE + L S V
Sbjct: 76 RGCRVLVLSPTRELASQ---------------------IAESFGDYGKFLPFS---TTVV 111
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
F G+ +G+ A L + VDILVATP
Sbjct: 112 FG----------GVTIGRQERA--------------------------LANGVDILVATP 135
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+D I+ R +L+ + YLV+DE D++L + L ++ T L
Sbjct: 136 GRLLDLID-RRSLSLDAVEYLVLDEADQMLDLGFIHALKRIV---------------TLL 179
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 294
P A SL F PR + L+A +DP ++A P+ T
Sbjct: 180 PKARQSL-----------FFSATMPRNI-ATLAAQYLRDPVQVAVT----PVATTA---- 219
Query: 295 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 354
ER+E + + K L +L+ ++ +VFT + R+ L G I
Sbjct: 220 ----ERVEQRVVHVPTGAKQALLATILRDASIDRVLVFTRTKHGADRVVRGLEKAG---I 272
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
G + Q R + L AFR G +VLV++D RG+DVEGV++VVN+D P + Y+
Sbjct: 273 GSAAIHGNKSQPQRERALAAFRAGICRVLVATDIAARGIDVEGVSHVVNFDLPNVPEAYV 332
Query: 415 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
HR GRTARAG G + + DE + + + +++ P +IP + R
Sbjct: 333 HRIGRTARAGADGLAISFCN-DEERAYLRDIERLTRQKVPEMAIPEGFVPPSR 384
>gi|254572509|ref|XP_002493364.1| Essential protein involved in ribosome biogenesis [Komagataella
pastoris GS115]
gi|238033162|emb|CAY71185.1| Essential protein involved in ribosome biogenesis [Komagataella
pastoris GS115]
gi|328352620|emb|CCA39018.1| hypothetical protein PP7435_Chr3-0044 [Komagataella pastoris CBS
7435]
Length = 721
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 51/299 (17%)
Query: 162 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 221
EL + DI+V+TPGRL++H+NA R L L +LVVDE DR+L W +L+ +
Sbjct: 352 ELPNYPDIIVSTPGRLLEHLNANR-LKLHCLRFLVVDEADRILHSTSFDWCAPLLRKINN 410
Query: 222 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 281
D + + L + S+ + K+V SATLT D KL+ L
Sbjct: 411 DRSTSYGKSGKSLSALNLSVVPCQ-----------------KLVFSATLTTDAEKLSHLQ 453
Query: 282 LHHPLFLTTGE-----------TRYKLPERLESYKLICESK-----LKPLYLVALLQS-- 323
L+ P L + Y+LP L+ L + KPL L LL
Sbjct: 454 LYRPRLLVVNDHGVESGKDGSSELYQLPPSLDELSLTLSNTDGVEFFKPLILFKLLTEYV 513
Query: 324 ----LGE--------EKCIVFTSSVESTHRLCTLLNHFGEL---RIKIKEYSGLQRQSVR 368
+G+ +VF S E++ R+ LL+ E ++++K + L R
Sbjct: 514 YRARMGDMNVSVPFKANVLVFIRSNEASARMEKLLDLLAEAFRKKLRVKSVNSLLDPETR 573
Query: 369 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 427
+ F KI VLV++D M RGMD+ +N+V+NYD P + Y+HR GRTARA + G
Sbjct: 574 ERRFHDFTRNKIDVLVATDVMARGMDLPNINHVINYDLPGSTREYVHRVGRTARANKFG 632
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 1 MGISSLFPVQVAVWQ-------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 53
G F VQ++V Q +T DL N+PTGSGKTL Y +PIVQ + R
Sbjct: 240 FGYKEAFSVQISVIQALQHDIKQTRISNSIPGDLLANAPTGSGKTLGYCVPIVQAILGRR 299
Query: 54 VRCLRALVVLPTRDLALQVNSARCKYCC 81
V ++ +++ PT+ L QV S + C
Sbjct: 300 VSSIKCIILAPTKPLVSQVYSTLNQLCT 327
>gi|302785159|ref|XP_002974351.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
gi|300157949|gb|EFJ24573.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
Length = 523
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 206/467 (44%), Gaps = 112/467 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS-------NRAV 54
G P+Q+A +I GL +RD+ + TGSGKT ++ +P++ +S RA+
Sbjct: 133 GYKKPTPIQMA----SIPLGLQQRDVIGIAGTGSGKTAAFVIPMLMYVSRLPKMTLERAI 188
Query: 55 RCLRALVVLPTRDLALQVNSAR---CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
ALV+ PT +LA Q+ KY N+ L+A
Sbjct: 189 EGPYALVMAPTTELAQQIQEETVKLAKYMDINVLSLVA---------------------- 226
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
G ++G GQSS +L +I++
Sbjct: 227 -----------GEAIG---GQSS---------------------------KLLQGCEIVI 245
Query: 172 ATPGRLMDHINATRGFTLEHLC-YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
ATPGRL+ + +G+ + H C Y+V+DE DR++ + E + DA
Sbjct: 246 ATPGRLLHCLE--QGYAVLHQCNYVVLDEGDRMIALGF---------------EEQVIDA 288
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
+PS+ ++ + +D+ Y R M SAT+ +LA+ L +P+ +T
Sbjct: 289 LEAMPSS-----NMKPESEDVELEDRIY-RTTYM-FSATMPPAVERLAKKYLRNPVVVTI 341
Query: 291 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
E + +R+ ++ + + KP L LL LGE IVF ++ + ++ L+ G
Sbjct: 342 EE----MSKRISQKVMMVDEEEKPKRLRRLLDELGEMSTIVFVNTKKQADKVSKQLHDMG 397
Query: 351 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 410
IK+ G + Q R + FR + L+++D + RG+DV V ++VNYD P+ +
Sbjct: 398 ---IKVATIHGGKTQQKRQTNFQDFRSKRRSCLIATDVVGRGIDVPDVGHIVNYDMPSTV 454
Query: 411 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQKADNDSCP 454
+ YIHR GRT RAG+ G T L ++ + F K+LL + N P
Sbjct: 455 EMYIHRIGRTGRAGKSGAATTFLTLNDSEVFYDLKQLLVRTKNPVPP 501
>gi|383864023|ref|XP_003707479.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Megachile
rotundata]
Length = 741
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 208/474 (43%), Gaps = 119/474 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L R + R LV++P
Sbjct: 182 PIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPAISRVLVLVP 237
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF ++
Sbjct: 238 TRELGVQV------------------YQVTKQLSQFTTV--------------------- 258
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VGL+VG + + + L K P DI++ATPGRL+DH+ T
Sbjct: 259 EVGLSVGGLDVKVQETVLRKNP---------------------DIVIATPGRLIDHLKNT 297
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + ++Q
Sbjct: 298 PTFSLDSIEVLILDEADRMLDEYFAEQMKYIVQ--------------------------- 330
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
+C R M+ SAT+T++ LA + L P+ + + + + L R
Sbjct: 331 -QCSRTRQ----------TMLFSATMTEEVKDLAAVSLDKPVKVFVDSNQDVAFNL--RQ 377
Query: 302 ESYKLICESK-LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
E ++ E + + L AL+ + +VF V++ + L G L IK+ E
Sbjct: 378 EFIRIRKEREGDREAILAALVCRTFHDHTMVF---VQTKKQAHRLHILLGLLGIKVGELH 434
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R + L+ F+ +I +L+++D RG+D+ GV V+N+ PA ++ YIHR GRT
Sbjct: 435 GNLTQPQRLENLRKFKNEEIDILLATDVAARGLDISGVKTVINFVMPATMQHYIHRVGRT 494
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLRPVYKS 472
ARAG++G +L + E K +++ A N P+ + IP +IE KS
Sbjct: 495 ARAGRVGVSVSLAGEQERSLVKDIIKNAKN---PVKNRIIPPDIIEKYNKKLKS 545
>gi|170579441|ref|XP_001894832.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158598430|gb|EDP36322.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 378
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 70/325 (21%)
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
Q+ D FAA+ ++GL +G+ VG + S+L +RP I
Sbjct: 2 QIGDQFAALGVSIGLKIGIIVGGKDRVAQSSDLARRPH---------------------I 40
Query: 170 LVATPGRLMDHINA---TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 226
+VATPGRL DH+ + G E L +LV+DE DRLL Y L T+L
Sbjct: 41 VVATPGRLADHLESDSENTGKLFEKLRFLVLDEADRLLDGQYSIELKTIL---------- 90
Query: 227 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 286
TFLP +L + SAT+T ++L Q+ + P
Sbjct: 91 -----TFLPKQRQTL-----------------------LFSATITSALSQLHQVSVKKPY 122
Query: 287 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRL 342
F ++ ++LE ++C +K YLV ++++ E+ ++F+ + L
Sbjct: 123 FF-EDKSEIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLILIFSHTCRECQAL 181
Query: 343 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 402
+ + G K+ Q R+ +L FR G+I++L+ +D +RG+D+ V+ VV
Sbjct: 182 AIMFHGLG---FKVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVV 238
Query: 403 NYDKPAYIKTYIHRAGRTARAGQLG 427
N++ P KTYIHR GR+ARAG+ G
Sbjct: 239 NHNVPQNPKTYIHRVGRSARAGRFG 263
>gi|238483821|ref|XP_002373149.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
gi|220701199|gb|EED57537.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
Length = 870
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 48/311 (15%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+CI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C
Sbjct: 296 DICISAATGSGKTLSYVLPLVTALEQVPAPRLRGLIVVPTRELVKQAREA-CELCAAG-S 353
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS---SIADEISEL 142
GL ++ + ++ + SL +V +V+ + L S+ D IS+
Sbjct: 354 GLRVASAVGNVAIKEEQR---SLMRVDEVYGPENFKLRQQDKLTDNDWLNFSLQDYISDA 410
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
+ + G +++ + VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DR
Sbjct: 411 GDQSESLPGY-------IRKAEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADR 463
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
LL E++Q W+ V+ ++ + DA TF F S K + G+ KD PR
Sbjct: 464 LLNESFQEWVDVVM-----NSLDARKDAGTF---GF-SGKFLANLGLPIQTKD---PR-- 509
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYKLPERLESY 304
K++LSAT+T+D +KL L L +P + G +Y LP RL+ Y
Sbjct: 510 KVILSATMTKDISKLNSLRLSNPKLVIVGSAEQATSREDESGIHDRIGDQYTLPPRLKEY 569
Query: 305 KL-ICESKLKP 314
L + + KP
Sbjct: 570 SLSVGDGSQKP 580
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
+ S KTL A+R+GKI +++++D +RG+D++ + +VVNYD P I TY+HR GRTAR
Sbjct: 733 NKSSASRKTLTAYRQGKISIIIATDRASRGLDLQSLTHVVNYDVPTSITTYVHRVGRTAR 792
Query: 423 AGQLGRCFTLLHKDEVKRF-KKLLQKADN 450
AG+ G +TL+ E + F +++Q +DN
Sbjct: 793 AGREGSAWTLVAHREGRWFTNEVIQTSDN 821
>gi|307200753|gb|EFN80820.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 334
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 143/278 (51%), Gaps = 42/278 (15%)
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
I++ATPGRL+DH+ T+GF+L +L +LV+ E DR+L ++ + +L++
Sbjct: 21 IIIATPGRLVDHLENTKGFSLRNLKFLVMGEADRILNMDFEIEVDKILRV---------- 70
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 71 -----IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKV 102
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
T+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL +
Sbjct: 103 EVS-TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRN 161
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G + + G Q+ R L F+ +L+S+D +R +D+ V+ V+N+D P
Sbjct: 162 LGFTAVPL---HGQMSQNKRIAALTKFKARNRSILISTDVASRSLDIPHVDIVINFDIPT 218
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
+ K YIHR GRTARAG+ GR T + + +V+ ++++ Q
Sbjct: 219 HSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRIEQ 256
>gi|327400905|ref|YP_004341744.1| DEAD/DEAH box helicase domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316413|gb|AEA47029.1| DEAD/DEAH box helicase domain protein [Archaeoglobus veneficus
SNP6]
Length = 389
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 197/452 (43%), Gaps = 112/452 (24%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ S TGSGKTL++A+PI++ + + ++ALV+ PTR+LA
Sbjct: 42 DVVAQSETGSGKTLAFAIPIIE--AAETGKGIQALVLTPTRELA---------------- 83
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
Q+++ F + GL +
Sbjct: 84 -----------------------NQIENEFRRFSRHKGLRIA------------------ 102
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
+ G+ +P+ +++L+ A D++V TPGRL+DH+ + + Y V+DE DR+L
Sbjct: 103 -NIHGGVPIEPQ--IRDLRRA-DVVVGTPGRLLDHVR-RKTVDFSRVEYFVIDEADRMLD 157
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+ +K I RC P R ++
Sbjct: 158 MGF-----------------------------IDDVKAIMRC--------TPKTRQ-SLL 179
Query: 266 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 325
SAT+ + LA + +P + T E P+ L Y + K LV LL+
Sbjct: 180 FSATIPPEVRALASRYMKNPKTIRTKE--LVDPKLLNQYYYDVDDSEKFSMLVHLLRKEN 237
Query: 326 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 385
+K +VFT+ +++ + L G K G QS R + ++ FR+G+I+VLV+
Sbjct: 238 PKKALVFTNMRKTSDIVAKNLFMHG---FKASVLHGGLTQSKRDRMMERFRKGEIRVLVA 294
Query: 386 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
+D +RG+DV+GV +V NYD P+ + YIHR GRTARAG+ G+ T+L + + F++++
Sbjct: 295 TDVASRGLDVKGVTHVFNYDVPSKAEDYIHRIGRTARAGKNGKAVTILGRKDHGSFRRIM 354
Query: 446 QK----ADNDSCPIHSIPSSLIESLRPVYKSG 473
K + +P + + RP +K G
Sbjct: 355 VKYGLTIERLEETFQEVPFKYVTTYRP-HKGG 385
>gi|427407203|ref|ZP_18897408.1| hypothetical protein HMPREF9161_01768 [Selenomonas sp. F0473]
gi|425707678|gb|EKU70722.1| hypothetical protein HMPREF9161_01768 [Selenomonas sp. F0473]
Length = 428
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 189/447 (42%), Gaps = 116/447 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI + PVQ + I P RD+ + TG+GKT ++ LP+++ + + + +ALV
Sbjct: 21 GIVAPTPVQ----ERAIPPMRAGRDVIAQAQTGTGKTFAFLLPVLEKIKPQG-QAAQALV 75
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
V PTR+LA+Q +AR V + A
Sbjct: 76 VTPTRELAIQ--TAR-------------------------------------VAEPLGAA 96
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
+G+ L G + I + +L + P+L +V TPGRL+DH+
Sbjct: 97 LGIGTALVYGGADIERQKEKLRRHPQL---------------------IVGTPGRLLDHV 135
Query: 182 NATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
RG L + +V+DE D +L+ + + +L+ T D +
Sbjct: 136 R--RGTLRLGSVNKVVLDEADEMLKMGFIEDVENILEHTAQDYQ---------------- 177
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
+ SAT+ +L + +H+P + R L E
Sbjct: 178 ----------------------LALFSATMPDRIVRLTKRFMHNPAHVKIASERTTL-EN 214
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTLLNHFGELRIKIK 357
+E L + K L L S+ EE +VF ++ E TH L T L G L +
Sbjct: 215 IEQIVLSVDEGEK---LDRLCASVNEEAPYLAMVFCATKERTHALMTALAGRGYL---VD 268
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
SG Q+ R+ L+ FR KIQ+L ++D RG+D+EGV +V NYD P + YIHR
Sbjct: 269 ALSGDLTQTQRAFVLRQFRAAKIQILCATDIAARGLDIEGVTHVYNYDLPPTVTDYIHRI 328
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKL 444
GRT RAG GR TL+ + +R +K+
Sbjct: 329 GRTGRAGARGRAVTLVTARQHERLRKM 355
>gi|154417727|ref|XP_001581883.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916114|gb|EAY20897.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 441
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 204/450 (45%), Gaps = 103/450 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+GIS VQ A ++ I + + S TG+GKT ++ALPI+ TLS + AL
Sbjct: 21 IGISKPTAVQQACVKQIITG----HNCIVISQTGTGKTAAFALPIISTLSKDPY-GIYAL 75
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q+ C+ IFG + + A I P
Sbjct: 76 VISPTRELAQQI----CQQF--KIFG-------------------------RGMNADICP 104
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+G GLA I D+ S L K P I+VATPGR++ H
Sbjct: 105 IIG---GLA-----ITDQASALEKNPH---------------------IVVATPGRILHH 135
Query: 181 I-NATRG---FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
+ +A++G F+ ++L YLV+DE DRL ++ Y W VL++ + E R + + S
Sbjct: 136 LRSASKGNTRFSFDNLQYLVLDEVDRLFKDGY--W-DDVLEIIKYLPEKRQTLCFSATKS 192
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA---TLTQDPNKLAQLDLHHPLFLTTGET 293
L TI P P + K S T +P
Sbjct: 193 DQVDLLTI--MTKPPSTSSCPLPSVGKSWFSDDKLTFYWEPTD----------------- 233
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGE----EKCIVFTSSVESTHRLCTLLNHF 349
L ++E K++ + + + +YL+ ++Q L E ++ IVF S+ E+ + +L +F
Sbjct: 234 --DLKPKIEHVKVLVQDEGREVYLMIIIQKLMEADLYKQVIVFASTKEAAQTITLILRNF 291
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
K ++S R K L+ FR G+ ++LV++D RG+D+ V+NV++++ P
Sbjct: 292 S---YKTAVMHSDMQESERLKELEEFRAGRQRILVATDVAARGLDIPFVDNVIHFNPPQN 348
Query: 410 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
TY+HRAGRT RAG+ GR + E K
Sbjct: 349 AATYVHRAGRTGRAGREGRSILFVSGREKK 378
>gi|432328452|ref|YP_007246596.1| DNA/RNA helicase, superfamily II [Aciduliprofundum sp. MAR08-339]
gi|432135161|gb|AGB04430.1| DNA/RNA helicase, superfamily II [Aciduliprofundum sp. MAR08-339]
Length = 450
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 188/442 (42%), Gaps = 117/442 (26%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F V + IGP + DL + S TGSGKTL++ +PI + L+ R L A+V++PTR
Sbjct: 21 FKEPTEVQESVIGPAIDGMDLIVQSKTGSGKTLAFLIPIFEKLN----RGLEAIVLVPTR 76
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA QV V +A G S
Sbjct: 77 ELA---------------------------------------QQVDRVARILAKGHGKST 97
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ G S+ ++I L +++ TPGR+MD + RG
Sbjct: 98 VVIYGGVSMENQIRGL----------------------KHASVVIGTPGRVMDLMR--RG 133
Query: 187 F-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 245
+ L + V+DE DR+L + D L A
Sbjct: 134 YLDLSRIKIFVLDEADRMLDMGF------------------IEDIRWILSKA-------- 167
Query: 246 RCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHP--LFLTTGETRYKLPERLE 302
PR +M+L SAT+ Q+ LA+ + +P + L+ E E +
Sbjct: 168 -------------PREKQMMLFSATMPQEIINLARHYMSNPEKIILSADEI---TAENVS 211
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
+ + K L +L+ + G K +VF ++ +T + +L +G + G
Sbjct: 212 QFYVEVGEINKIAKLSSLIINEGG-KYLVFCNTKRNTKSVAEILQKYG---FRAFALHGD 267
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
RQ+ RS+T+ AF++GKI +L+S+D RG+DV G+ +VVNYD P Y K Y+HR GRT R
Sbjct: 268 MRQASRSRTMDAFKQGKINILISTDVAARGIDVHGITHVVNYDVPQYPKDYVHRIGRTGR 327
Query: 423 AGQLGRCFTLLHKDEVKRFKKL 444
G+ T + ++E++ F+++
Sbjct: 328 LDARGKAITFVSREEMEYFRRI 349
>gi|317140099|ref|XP_003189236.1| ATP-dependent RNA helicase dbp6 [Aspergillus oryzae RIB40]
Length = 858
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 48/311 (15%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+CI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C
Sbjct: 296 DICISAATGSGKTLSYVLPLVTALEQVPAPRLRGLIVVPTRELVKQAREA-CELCAAG-S 353
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS---SIADEISEL 142
GL ++ + ++ + SL +V +V+ + L S+ D IS+
Sbjct: 354 GLRVASAVGNVAIKEEQR---SLMRVDEVYGPENFKLRQQDKLTDNDWLNFSLQDYISDA 410
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
+ + G +++ + VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DR
Sbjct: 411 GDQSESLPGY-------IRKAEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADR 463
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
LL E++Q W+ V+ ++ + DA TF F S K + G+ KD PR
Sbjct: 464 LLNESFQEWVDVVM-----NSLDARKDAGTF---GF-SGKFLANLGLPIQTKD---PR-- 509
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------RYKLPERLESY 304
K++LSAT+T+D +KL L L +P + G +Y LP RL+ Y
Sbjct: 510 KVILSATMTKDISKLNSLRLSNPKLVIVGSAEQATSQEDESGIHDRIGDQYTLPPRLKEY 569
Query: 305 KL-ICESKLKP 314
L + + KP
Sbjct: 570 SLSVGDGSQKP 580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
+ S KTL A+R+GKI +++++D +RG+D++ + +VVNYD P I TY+HR GRTAR
Sbjct: 721 NKSSASRKTLTAYRQGKISIIIATDRASRGLDLQSLTHVVNYDVPTSITTYVHRVGRTAR 780
Query: 423 AGQLGRCFTLLHKDEVKRF-KKLLQKADN 450
AG+ G +TL+ E + F +++Q +DN
Sbjct: 781 AGREGSAWTLVAHREGRWFTNEVIQTSDN 809
>gi|380015035|ref|XP_003691517.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Apis florea]
Length = 710
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 209/465 (44%), Gaps = 117/465 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L R + R LV++P
Sbjct: 181 PIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPAISRVLVLVP 236
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF ++ VGL
Sbjct: 237 TRELGVQV------------------YQVTKQLSQFTTI-----------------EVGL 261
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
SVG G+ ++ + L+ + DI++ATPGRL+DH+ T
Sbjct: 262 SVG-----------------------GLDVKAQEAV--LRRSPDIVIATPGRLIDHLKNT 296
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + + +
Sbjct: 297 PTFSLDSIEVLILDEADRMLDEYFAEQMKYI----------------------------V 328
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPERL 301
++C R ++ SAT+T++ LA + L+ P+ F+ + + + L +
Sbjct: 329 KQCSRSRQ----------TILFSATMTEEVKDLAAVSLNKPVKVFIDSNQDVAFNLRQEF 378
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E + + L AL+ + +VF V++ + L G L IK+ E G
Sbjct: 379 IRIRKEREGDREAI-LAALICRTFHDHVMVF---VQTKKQAHRLHILLGLLGIKVGELHG 434
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R + L F+ +I +L+++D RG+D+ GV V+N+ PA I+ YIHR GRTA
Sbjct: 435 NLTQPQRLENLTKFKNEEIDILLATDVAARGLDISGVKTVINFVMPATIQHYIHRVGRTA 494
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIE 464
RAG++G +L + E K++++ A N P+ + IPS +I+
Sbjct: 495 RAGRVGVSVSLAGEQERSLVKEIIKNAKN---PVKNRIIPSDIID 536
>gi|363749669|ref|XP_003645052.1| hypothetical protein Ecym_2514 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888685|gb|AET38235.1| Hypothetical protein Ecym_2514 [Eremothecium cymbalariae
DBVPG#7215]
Length = 620
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 149/282 (52%), Gaps = 47/282 (16%)
Query: 168 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 227
DIL+ TPGRL+DH++ + F+L++L +L++DE DRLL +++Q W ++
Sbjct: 308 DILIVTPGRLVDHLHMS-TFSLQNLKFLILDEADRLLNQSFQNWCSELM----------- 355
Query: 228 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
+E DK ++KM+ SATLT + KL +L LH+P
Sbjct: 356 -------------------TKIEAEKLDKNPGNILKMIFSATLTTNTEKLHELMLHNPKL 396
Query: 288 LTTG-ETRYKLPERLESYKL---ICESKLKPLYLVALLQSLG--EEKCIVFTSSVESTHR 341
+T G E Y +P+ L+ + + +S KPL L+ LL +L + + +VF S +++ R
Sbjct: 397 ITMGTEKLYNMPKLLQEFNIPIPTAKSHKKPLILLRLLSTLQAPDLRVLVFVKSNDASIR 456
Query: 342 LCTLLN-----HFGELRIKIKEYSGLQRQSVRSKTLKAF-----REGKIQVLVSSDAMTR 391
L +LL H G I++ + +++ K + +F ++ +VL+S+D M+R
Sbjct: 457 LSSLLQIMINRHLGTDSIEVASINNNNSKALNKKLISSFSKPNSQQKTTKVLISTDLMSR 516
Query: 392 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
G+D+ + +V+NYD P + Y+HR GRTARA G +L
Sbjct: 517 GIDIINITHVINYDLPVSSQQYVHRCGRTARAHTHGSALNIL 558
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
D+ +N+ TGSGKTL+Y++PIV LS R V LRA++++PT+ L QV
Sbjct: 225 DILVNASTGSGKTLAYSIPIVHILSKRIVNRLRAIILVPTKLLIQQV 271
>gi|302818333|ref|XP_002990840.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
gi|300141401|gb|EFJ08113.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
Length = 583
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 206/467 (44%), Gaps = 112/467 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS-------NRAV 54
G P+Q+A +I GL +RD+ + TGSGKT ++ +P++ +S RA+
Sbjct: 204 GYKKPTPIQMA----SIPLGLQQRDVIGIAGTGSGKTAAFVIPMLMYVSRLPKMTLERAI 259
Query: 55 RCLRALVVLPTRDLALQVNSAR---CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 111
ALV+ PT +LA Q+ KY N+ L+A
Sbjct: 260 EGPYALVMAPTTELAQQIQEETVKLAKYMDINVLSLVA---------------------- 297
Query: 112 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 171
G ++G GQSS +L +I++
Sbjct: 298 -----------GEAIG---GQSS---------------------------KLLQGCEIVI 316
Query: 172 ATPGRLMDHINATRGFTLEHLC-YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
ATPGRL+ + +G+ + H C Y+V+DE DR++ + E + DA
Sbjct: 317 ATPGRLLHCLE--QGYAVLHQCNYVVLDEGDRMIALGF---------------EEQVIDA 359
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
+PS+ ++ + +D+ Y R M SAT+ +LA+ L +P+ +T
Sbjct: 360 LEAMPSS-----NMKPESEDVELEDRIY-RTTYM-FSATMPPAVERLAKKYLRNPVVVTI 412
Query: 291 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
E + +R+ ++ + + KP L LL LGE IVF ++ + ++ L+ G
Sbjct: 413 EE----MSKRISQKVIMVDEEEKPKRLRRLLDELGEMSTIVFVNTKKQADKVSKQLHDMG 468
Query: 351 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 410
IK+ G + Q R + FR + L+++D + RG+DV V ++VNYD P+ +
Sbjct: 469 ---IKVATIHGGKTQQKRQTNFQDFRSKRRSCLIATDVVGRGIDVPDVGHIVNYDMPSTV 525
Query: 411 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQKADNDSCP 454
+ YIHR GRT RAG+ G T L ++ + F K+LL + N P
Sbjct: 526 EMYIHRIGRTGRAGKSGAATTFLTLNDSEVFYDLKQLLVRTKNPVPP 572
>gi|255957139|ref|XP_002569322.1| Pc21g23550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591033|emb|CAP97252.1| Pc21g23550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 819
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 24/266 (9%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
DLC+++ TGSGKTLSY LP+V L R LR L+V+PTR+L Q + C+ C
Sbjct: 276 DLCVSAATGSGKTLSYVLPLVTALPPRPASRLRGLIVVPTRELVKQARES-CELCASGSR 334
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
I ++ + ++ + L + + QV + GL G S+ D ++E I
Sbjct: 335 LHIGS-AVGNVAIKDEQKLLMRVDQVYNPAIQQQQRDGLK-GNDWMNLSLEDCVNEAIDS 392
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
G +Q + VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DRLL
Sbjct: 393 SGSLPGH-------IQRSEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADRLLN 445
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
E++Q W+ V+ ++ N TF P K + G+ KP PR K++
Sbjct: 446 ESFQEWVDVVM-----NSLNSREAPETFGPGG----KLLSELGL--SIDAKP-PR--KVI 491
Query: 266 LSATLTQDPNKLAQLDLHHPLFLTTG 291
LSAT+T+D +KL L L +P + G
Sbjct: 492 LSATMTRDISKLNSLRLANPKMVIIG 517
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREG 378
L+ S + ++FT S ES RL L++ L ++ + S KTL A+R+G
Sbjct: 648 LVPSPSRKTVLIFTKSSESASRLARLISLLHPALAKRVGTIIKSNKSSASRKTLTAYRQG 707
Query: 379 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
+I V+V++D +RG+D+E + +V+NYD P I TY+HR GRTARAG+ G ++L+ E
Sbjct: 708 RISVIVATDRASRGLDLESLTHVINYDIPTSITTYVHRVGRTARAGRAGSAWSLVAHREG 767
Query: 439 KRF 441
+ F
Sbjct: 768 RWF 770
>gi|348535433|ref|XP_003455205.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Oreochromis
niloticus]
Length = 590
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 189/455 (41%), Gaps = 130/455 (28%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-- 58
+ + + PVQ A I + +D+ + TGSGKTL++ +PI++ L R + +
Sbjct: 27 LKFTHMTPVQSAC----IPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKLKKMQ 82
Query: 59 --ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
ALV+ PTR+LA+Q I+E+ QF PQ K +
Sbjct: 83 VGALVITPTRELAVQ---------------------ISEVMEQF----IEKFPQFKQI-- 115
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L +G S+ A EDV + +I++ATPGR
Sbjct: 116 -----------LLIGGSNPA--------------------EDVEKFKDKGANIVIATPGR 144
Query: 177 LMDHIN-ATRGFTL----EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
L D + G L + L LV+DE DRLL ++A L T+L
Sbjct: 145 LEDMFRRKSDGLDLASSVKSLDVLVLDEADRLLDMGFEASLNTIL--------------- 189
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
G L RR G + SAT TQ+ KL + L +P+ +T
Sbjct: 190 -------GYLPKQRRTG----------------LFSATQTQELEKLVRAGLRNPVRITVK 226
Query: 292 E-------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 344
E T K P RL +Y IC ++ K LVA L+ EK +VF S+ C
Sbjct: 227 EKGLAAAATAQKTPSRLSNYYTICRAEDKFNNLVAFLRQHKHEKLLVFFST-------CA 279
Query: 345 LLNHFGEL------RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
+ ++G + ++ I G + R+ FR+ K +LV +D M RG+D+ V
Sbjct: 280 CVEYYGRVLEMLVKKVTIHCIHGKMKHK-RNSIFADFRKLKSGILVCTDVMARGIDIPDV 338
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 433
N V+ YD P+ ++HR GRTAR G G L
Sbjct: 339 NWVLQYDPPSSASAFVHRCGRTARIGNYGDALVFL 373
>gi|205375157|ref|ZP_03227948.1| DEAD-box ATP dependent DNA helicase [Bacillus coahuilensis m4-4]
Length = 398
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 189/434 (43%), Gaps = 111/434 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
GI+ P+Q V P + E RD+ + TGSGKTL++ LP+++ + + ++ L
Sbjct: 21 GITEPTPIQTEVI-----PLMVEGRDVIAQAKTGSGKTLAFILPMLEKVDLEKI-AVQGL 74
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+V PTR+LA+QV + L+ + P+V +V A
Sbjct: 75 IVAPTRELAIQVTD------------------------ELKKLVELEFPEV-NVLAVYG- 108
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS-AVDILVATPGRLMD 179
GQ D E L +L++ + I+VATPGRL+D
Sbjct: 109 ----------GQ----------------------DVEKQLHKLETRNIHIVVATPGRLLD 136
Query: 180 HINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
H+ RG L L L++DE D++L + +LP V Q+ + R +
Sbjct: 137 HMR--RGTIDLSELDMLILDEADQML---HIGFLPEVEQIIEATPPTRQT---------- 181
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ SAT+++D LA+ P + + + +L
Sbjct: 182 -------------------------ALFSATISKDVRTLAKRYQQQP-YTVQVKDKERLV 215
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
E +E + + + K LV +++ I+F ++ +L L G L + E
Sbjct: 216 EEIEQFVVETTDRKKLQALVEVIKETQPFMGIIFCRTIRRVSKLHMELKAKGFL---VDE 272
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G Q+ R +K FR+ KIQ+L+++D RG+DVEGV +V NYD P +++YIHR G
Sbjct: 273 LHGDLSQAKRENVMKRFRDAKIQLLIATDVAARGLDVEGVTHVYNYDIPQDVESYIHRIG 332
Query: 419 RTARAGQLGRCFTL 432
RT RAG+ G T
Sbjct: 333 RTGRAGETGMAITF 346
>gi|323454376|gb|EGB10246.1| hypothetical protein AURANDRAFT_23571, partial [Aureococcus
anophagefferens]
Length = 545
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 190/466 (40%), Gaps = 115/466 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC--------LR 58
F A+ + + L RD+C ++ TGSGKT ++ LP+++ R VR +R
Sbjct: 71 FSRPTAIQERVVPLALAGRDVCASAATGSGKTAAFGLPLLE----RVVRAKAAHGKPTIR 126
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
+++LPTR+LA Q C + + GL QF
Sbjct: 127 GVILLPTRELAAQ--------CEEMVRGL----------GQFS----------------- 151
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
G V L VG + ++ EL R K D++VATPGRL+
Sbjct: 152 ----GADVALVVGGAKDV-KVQELALRRK-------------------PDVVVATPGRLL 187
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ RG L+ + V+DE DRLL ++ L +L LP
Sbjct: 188 DHLTNGRGVHLDDVECCVLDEADRLLELGFEDELRQLL---------------GALPG-- 230
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGE 292
G ERG + M+ SAT LA L L P+ + G
Sbjct: 231 ---------GSERGKGGRGSGTRQTMLFSATFGAKVESLAALSLVRPVRVRVASGHGAGG 281
Query: 293 TRYKLPE---RLESYKLICESKLKPLYLVALLQSLGE--EKCIVFTSSVESTHRLCTLLN 347
KL + RL++ + E + L+ALL + + +VF + +T R+ LL
Sbjct: 282 VAAKLTQDFVRLKAAEGRAEDAEREATLLALLTRTVDPASQAVVFFDTKAATRRVGALLE 341
Query: 348 HF-------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
G E G RQ+ R L F G +L+ +D RG+D+ GV
Sbjct: 342 ALRARGGLSGHALPPATELHGGLRQAQRDANLARFERGDAGILLCTDVAARGLDLAGVGA 401
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
VVN++ P + TY+HR GRTARAG+ G TL+ + K+ L+
Sbjct: 402 VVNFEMPRTVATYVHRVGRTARAGRSGHAVTLVGPQRRQALKEFLR 447
>gi|357589331|ref|ZP_09127997.1| hypothetical protein CnurS_03986 [Corynebacterium nuruki S6-4]
Length = 449
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 190/448 (42%), Gaps = 110/448 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-----RC 56
GI F +Q + T+ L +DL + TG GKTL + +P++ + + A
Sbjct: 26 GIDRTFAIQ----ERTLPIALTGKDLIGQARTGMGKTLGFGVPLLDRVFDDADVTAPDGT 81
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+RALVV+PTR E+C+Q V + +
Sbjct: 82 VRALVVVPTR----------------------------ELCIQ-----------VAEDLS 102
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
A + L+V G G+ + E + L DI+V TPGR
Sbjct: 103 DAAAHLPLTVTTIYG-------------------GVPF--EKQTEALAHGTDIVVGTPGR 141
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+D ++ + L H+ LV+DE D +L + + + ++ T + A+ +P
Sbjct: 142 LLD-LSRQQLLDLSHVEILVLDEADEMLDQGFLDDVKAIMAQTAPHRQTMLFSAT--MPG 198
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
+L RGF D P V++ T Q P TT +T +
Sbjct: 199 PIVALS--------RGFMDHP----VRIRADTTDAQ------------PTHATTTQTVF- 233
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+S+KL S L LLQ+ G + IVF + + + N +L ++
Sbjct: 234 -----QSHKLDRMS-----VLARLLQTPGRGRTIVF---ARTKRQAAMVANDLADLGFRV 280
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
G RQ R ++L AFREG + ++V++D RG+DV+ V +V+NY P KTY+HR
Sbjct: 281 GAVHGDMRQKDREQSLAAFREGTVDIMVATDVAARGIDVDDVTHVINYQVPEDDKTYVHR 340
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKL 444
GRT RAG G TL+ DEV R++ +
Sbjct: 341 IGRTGRAGHSGVAVTLVGWDEVTRWQAI 368
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 200/451 (44%), Gaps = 105/451 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA- 59
+G S P+Q A I L RD+C ++ TGSGKT ++ALP ++ L +R R L A
Sbjct: 167 LGYKSPTPIQAAC----IPLALAGRDICGSAVTGSGKTAAFALPFLERLLHRP-RGLAAT 221
Query: 60 --LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
LV+ PTR+LA+Q+ HS+ E QF +
Sbjct: 222 YVLVLTPTRELAVQI------------------HSMIEKLAQFTDI-------------- 249
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+V L VG S+ + L + P +++VATPGRL
Sbjct: 250 -------NVALIVGGLSLQVQAITLRQSP---------------------EVVVATPGRL 281
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 237
+DH+ ++ LE L LV+DE DRLL ++ V ++ R+ R T L SA
Sbjct: 282 IDHLRNSQSVGLEDLAVLVLDEADRLLEMGFRE---EVAEVVRAAPRKR----QTMLFSA 334
Query: 238 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKL 297
F D+ V+ +++ +L Q A P LT R K
Sbjct: 335 T--------------FNDQ-----VRDLVALSLKQPVRLAADAARAAPKLLTQEIVRLKG 375
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEE-KCIVFTSSVESTHRLCTLLNHFGELRIKI 356
P + + +C L L A +S G+ + IVF S+ HRL L G
Sbjct: 376 PAAAATKEAVC------LALCA--RSFGDRGRTIVFCSTKTKAHRLKILFGLAG--LPPA 425
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
E G Q+ R ++L++FR G L+++D RG+D++GV VVNYD P ++TY+HR
Sbjct: 426 AELHGNMSQTARLESLESFRRGDTAFLLATDVAARGLDIQGVEVVVNYDAPPKLETYLHR 485
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
GRTARAG G TL+ + K+L +K
Sbjct: 486 IGRTARAGAAGVAVTLVEDGDRGLLKELGKK 516
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 173/404 (42%), Gaps = 105/404 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 50 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 106
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 107 LAFQIS---------------------------------------EQFEALGSSIGVQCA 127
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 128 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 166
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 167 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 206
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 207 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 247
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 248 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQSK 304
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K
Sbjct: 305 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 348
>gi|269469155|gb|EEZ80700.1| ATP-dependent RNA helicase RhlE [uncultured SUP05 cluster
bacterium]
Length = 434
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 194/449 (43%), Gaps = 114/449 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQVNSARCKYCC 81
+DL + TG+GKT + LPI+Q LS +R L++ PTR+LA
Sbjct: 39 KDLMAAAQTGTGKTAGFTLPILQLLSKGKPTNSNQVRTLILTPTRELAA----------- 87
Query: 82 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 141
QV+D A + L + G
Sbjct: 88 ----------------------------QVQDSVATYGKHLPLKSTVVFG---------- 109
Query: 142 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 201
G+ +P+ +++L+ VDILVATPGRL+D + + + L +V DE D
Sbjct: 110 ---------GVKINPQ--MKKLRGGVDILVATPGRLLD-LYSQNAVKFDQLEIIVFDEAD 157
Query: 202 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 261
R+L + + +L++ LP P+
Sbjct: 158 RMLDMGFIHDIKRILKV---------------LP-----------------------PKR 179
Query: 262 VKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL 321
++ SAT + + KLA+ +H+P+ ++T + + + +SK + L L L+
Sbjct: 180 QTLMFSATFSDEIRKLAKSLVHNPVEVSTTPRNTTVKSVKQWIHPVDKSKKQAL-LTKLI 238
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 381
+ + +VF+ + +R+ T L G I G + Q R++ L F++GK+
Sbjct: 239 KDHSWYQVLVFSRTKHGANRIATQLGKRG---ITAAAIHGNKSQGARTRALADFKDGKVN 295
Query: 382 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
VLV++D RG+D+ + +VVN+D P + Y+HR GRT RAG G +L+ DEVK+
Sbjct: 296 VLVATDIAARGIDIIELPHVVNFDLPHVPEDYVHRIGRTGRAGSKGEAISLVSADEVKQL 355
Query: 442 ---KKLLQ-KAD----NDSCPIHSIPSSL 462
++L+Q K D +D P H +P SL
Sbjct: 356 FDIERLIQNKLDRIMVDDFVPDHDLPESL 384
>gi|331215191|ref|XP_003320276.1| hypothetical protein PGTG_01188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299266|gb|EFP75857.1| hypothetical protein PGTG_01188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 874
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 227/501 (45%), Gaps = 96/501 (19%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTL----------SNRAVRCLRALVVLPTRDLALQVNS 74
RDL + + TGSGKTL+YALPI+ L S+ + + LV+ PTR+L LQV +
Sbjct: 276 RDLVVIAETGSGKTLAYALPILNALILSPPSPMLKSSPQILPIVTLVLTPTRELCLQVKA 335
Query: 75 ARCKYCCKNIFGLIADHSIAEMCVQFDSLL---FISLPQVKDVFAAIAPAVGLSVGLAVG 131
D + MC + S + P I V + G+A+
Sbjct: 336 H-------------IDTFLKAMCSETQSSQEEGATNEPSSSKNRTGIT-TVSICGGIAIA 381
Query: 132 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT--- 188
+ E S+ + P C I++ATPGRL D I + F
Sbjct: 382 KQRKQLERSKKLMEPGKGGLGC---------------IVIATPGRLWDMIQSWDEFAEGI 426
Query: 189 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTR----------SDNEN------------- 225
L +L++DE D+++ + + L +L+LT+ +DN N
Sbjct: 427 KRKLDWLIIDEADKMIEKGHFEELEKILKLTKRPKDRRPRHTTDNNNADEDDGEEEEWED 486
Query: 226 ----RFSDASTFLPSAFGSL-------KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 274
+ +DA ++ ++ K ++ +R FK KP P + + A D
Sbjct: 487 EWTSQANDADNYIKEKIRTMVFSATMDKNLQINLKKRSFKGKP-PAVGGSIPPADPMHD- 544
Query: 275 NKLAQLDLHHP---LFLTTGETRYKLPERLESYKLICESKLKPLYLVA-LLQSLGEEKCI 330
L Q+D P L T + R + L+ K+ C K K LYL+ +L+ G + I
Sbjct: 545 -LLEQIDFRDPHPELIDLTPQGR--MVGGLKECKIECVLKDKDLYLLHFMLRYTG--RTI 599
Query: 331 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
VF SS+ + RL +LN + +S +Q++S R K+L FR +L+S+D
Sbjct: 600 VFLSSISALRRLSPMLNLLLPDSTVLTLHSEMQQRS-RLKSLDRFRSSSNSILLSTDVAA 658
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ---K 447
RG+D+ V++V++Y P Y+HR+GRTARAG+ G L+ DE+K ++ L++ +
Sbjct: 659 RGLDIPQVDHVIHYQVPRSSDCYVHRSGRTARAGKGGVALALIAPDELKTWRSLMKNLGR 718
Query: 448 ADN-DSCPI-HSIPSSLIESL 466
AD+ S PI HSI + L E L
Sbjct: 719 ADDLPSPPIEHSISNKLKELL 739
>gi|281202503|gb|EFA76705.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1173
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 179/438 (40%), Gaps = 103/438 (23%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + TI L RD+ ++ TG GKT ++ALPI+ LS A+V+ PTR
Sbjct: 680 FKAPSNIQYNTIPAILSGRDILASAKTGQGKTAAFALPILSALSEDPYGIF-AVVLTPTR 738
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA+Q+ F A+ A+ ++
Sbjct: 739 ELAVQIGEQ---------------------------------------FRALGSAINVNC 759
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ +G + L KRP I+VATPGRL H+N
Sbjct: 760 CVVIGGIDNVQQSLILDKRPH---------------------IIVATPGRLAAHLNNGMK 798
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
L+ +LV+DE DR+L ++ + +++ LP
Sbjct: 799 LALQFCRFLVLDEADRMLGPDFELEVQKIVE---------------HLP----------- 832
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
P++ ++ SAT+T KL + + +P ++ +Y E L Y +
Sbjct: 833 ------------PKIQTLLYSATMTNSNKKLESIPIKNP-YIFEDNNKYDTVETLSQYYV 879
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
++ K +LV LL+ IVF ++ + + +LN +L IK Q
Sbjct: 880 FMPAQAKDCHLVYLLKKHDSSSVIVFINNCRTVEAVKGMLN---KLDIKSVSLHSFLSQK 936
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R LK F+ GKI+VL+++D +RG+D+ V V+NY K YIHR GRTAR G+
Sbjct: 937 DRLNALKQFKSGKIRVLIATDVASRGLDIPDVQMVINYKLSNSSKDYIHRVGRTARFGRS 996
Query: 427 GRCFTLLHKDEVKRFKKL 444
GR + + +V+ K +
Sbjct: 997 GRAISFVTPHDVELVKNV 1014
>gi|334703122|ref|ZP_08518988.1| putative ATP-dependent RNA helicase RhlE [Aeromonas caviae Ae398]
Length = 417
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 187/448 (41%), Gaps = 111/448 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNRAVRC 56
+G ++ PVQ + I L RDL + TG+GKT ++ LP+++ L ++ A R
Sbjct: 22 LGYAAPTPVQASA----IPLILAGRDLMAGAQTGTGKTAAFVLPLLEQLLQHPTSDAPRP 77
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+RALV++PTR+LA+QV + +Y
Sbjct: 78 IRALVLVPTRELAVQVAESVTRY------------------------------------- 100
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
A L+ L G SIA ++ + L + VDIL+ATPGR
Sbjct: 101 --ARGTTLTSTLVYGGVSIAAQV---------------------EALNAGVDILIATPGR 137
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+DH+ G TL L +LV DE DR+L + + +L+ +D + T L S
Sbjct: 138 LLDHLRQG-GLTLAELRHLVFDEADRMLDMGFMDEIKALLKQIPADRQ-------TLLFS 189
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
A C V +D P LV++ P ++ ++ GE +
Sbjct: 190 ATCDDNLFALCKVL--LRD---PALVEVA--------PRNTTAAEVEQRVYAVDGERKLA 236
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
L E + + K G ++F+ + + +L L G I
Sbjct: 237 LVEHMLTVK-------------------GWAPALIFSRTRQGADKLAQQLGKGG---INA 274
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
+ G QS R L AFR G +Q LV++D RG+D+ +N+V+N + P + Y+HR
Sbjct: 275 LAFHGDLSQSARENVLLAFRAGTLQALVATDVAARGLDITDLNHVINLEFPHQPEDYVHR 334
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKL 444
GRT RAG G TL ++ +K+
Sbjct: 335 IGRTGRAGNKGLAITLFSPEDAPLLEKV 362
>gi|45361669|ref|NP_989409.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
gi|40787696|gb|AAH64887.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
Length = 479
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 184/438 (42%), Gaps = 110/438 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+GI PVQ + I P L RD + TGSGKT ++ LPI+Q LS L
Sbjct: 20 LGILKPSPVQ----ENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPFGIF-CL 74
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q IAE F +
Sbjct: 75 VLTPTRELAYQ---------------------IAEQ------------------FRVLGK 95
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+GL + VG + + EL ++P +++ATPGRL DH
Sbjct: 96 PLGLKDCIIVGGMDMVAQALELSRKPH---------------------VVIATPGRLADH 134
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I ++ F+++ + +LV+DE DRLL + + D L +
Sbjct: 135 IRSSNTFSIKKIRFLVLDEADRLLEQGCTDFT---------------QDLQVILEAVPAQ 179
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPE 299
+T ++ SATLT +L + ++ P F +T E R E
Sbjct: 180 RQT--------------------LLFSATLTDTLQELKTIAMNKPFFWESTSEVRT--VE 217
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIK 355
+L+ ++ K+K YLV L+Q +E ++FT++ ++ L +L F +
Sbjct: 218 QLDQRYILVPEKVKDAYLVHLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVA 277
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
+ + +Q R L F+ ++L+++D RG+D+ V V+N++ P K YIH
Sbjct: 278 L---HSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 334
Query: 416 RAGRTARAGQLGRCFTLL 433
R GRTARAG+ G TL+
Sbjct: 335 RVGRTARAGRNGMAITLV 352
>gi|335420259|ref|ZP_08551297.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
gi|334894618|gb|EGM32803.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
Length = 437
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 45/295 (15%)
Query: 150 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
G+ Y P+ + + + VDI+VATPGRL+D + L ++ LV+DE DR+L
Sbjct: 106 GGVGYQPQ--IAQFKKGVDIVVATPGRLLDLLQEGHA-DLSNIQTLVLDEADRMLD---- 158
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
G + I+R K P R ++ SAT
Sbjct: 159 ----------------------------MGFIHDIKRV-----LKYVPEKRQT-LLFSAT 184
Query: 270 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 329
++D KLA LH P+ + R +R++ ++ E K L L++ G +
Sbjct: 185 FSKDIRKLASSLLHKPVEIDVA-PRNATADRIDQKVVMVEKPRKRAVLSHLIKENGWHQV 243
Query: 330 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
+VF + +RLC L G + G + Q+ R+K L+ F++GKIQVLV++D
Sbjct: 244 LVFARTKHGANRLCKQLESDG---LPSAALHGNKSQNARTKALEGFKDGKIQVLVATDIA 300
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
RG+D+E + +VVNY+ P + Y+HR GRT RAG+ G +L+ DE K K +
Sbjct: 301 ARGIDIESLPHVVNYELPNVSEDYVHRIGRTGRAGEAGEAVSLVGPDERKLLKDI 355
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
G S P+Q + I L +D+ + TG+GKT ++ LP++ L +R + R LV
Sbjct: 20 GYSEPTPIQA----KAIPAVLDGQDVLAAAQTGTGKTAAFTLPLLHKLGDRQEKKPRVLV 75
Query: 62 VLPTRDLALQVNSARCKY 79
+ PTR+LA QVN + Y
Sbjct: 76 LAPTRELAAQVNESVRTY 93
>gi|422294697|gb|EKU21997.1| ATP-dependent RNA helicase DDX23/PRP28 [Nannochloropsis gaditana
CCMP526]
Length = 820
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 200/456 (43%), Gaps = 98/456 (21%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG P+Q A I G+ RD+ + TGSGKT ++A+P++
Sbjct: 404 MGWKEPSPIQRAA----IPVGMGRRDIIGIAETGSGKTGAFAIPMIN------------- 446
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
YC L A+H P+ + +AP
Sbjct: 447 ------------------YC----LTLPAEHRT-------------RTPEEGPLALVMAP 471
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEA--GICYDP-EDVLQELQSAVDILVATPGRL 177
L+ I +++ LI+ L++ G+ P ED L+ VDIL+ TPGRL
Sbjct: 472 TRELA-------EQIEAQVAILIEGTGLKSCSGVGGKPIEDQAFALREGVDILIGTPGRL 524
Query: 178 MDHINATRGFTLEHLCYLVVDETDRLLREAYQ----AWLPTVLQLTRSDNE---NRFSDA 230
D I+ +R L Y+V+DE DR++ ++ A L T+ L +S+NE +R +DA
Sbjct: 525 KDLID-SRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDTMGGLLKSENEEEADRQADA 583
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
+ K + R+ M SAT+ ++A+ L P +
Sbjct: 584 AQ---------------------KGEQLYRVTAM-FSATMPPAVERIARSYLRAPATIKI 621
Query: 291 GETRYKLPERLESYKLICESKLKPLYLVALLQS-LGEEKCIVFTSSVESTHRLCTLL-NH 348
GE +R+E + K +V LL S E+K IVF ++ R C +L H
Sbjct: 622 GEANSGKNKRIEQRLIFTTEPGKRKAVVDLLTSPKKEDKFIVFVNA----KRACDVLARH 677
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
+ RI G + Q R +L+AFR G VLV++D RG+D+ V++V+NYD PA
Sbjct: 678 LEQTRISCGILHGGKSQDQREASLEAFRNGVFTVLVATDVAARGLDIPDVSHVINYDMPA 737
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
I+ Y HR GRT RAG+ G TLL +++ + F L
Sbjct: 738 KIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDL 773
>gi|16126090|ref|NP_420654.1| DEAD/DEAH box helicase [Caulobacter crescentus CB15]
gi|221234860|ref|YP_002517296.1| ATP-dependent RNA helicase [Caulobacter crescentus NA1000]
gi|13423288|gb|AAK23822.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter
crescentus CB15]
gi|220964032|gb|ACL95388.1| ATP-dependent RNA helicase [Caulobacter crescentus NA1000]
Length = 517
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 191/454 (42%), Gaps = 120/454 (26%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRA-VRCLRA 59
G ++ P+Q + I L +D+ + TG+GKT ++ LP++ L S RA R RA
Sbjct: 21 GYTTATPIQA----QAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDRLQSGRAKARMPRA 76
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV+ PTR+LA QV ++ KY A
Sbjct: 77 LVIAPTRELADQVAASFEKY---------------------------------------A 97
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
LS L +G S D+ ++L VD+L+ATPGRL+D
Sbjct: 98 KGTKLSWALLIGGVSFGDQ---------------------EKKLDRGVDVLIATPGRLLD 136
Query: 180 HINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
H RG + + +LVVDE DR+L F+P
Sbjct: 137 HFE--RGKLLMTGVQFLVVDEADRMLDMG-------------------------FIPD-- 167
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGE 292
+ER FK P P+ + SAT+ + +L + L P+ + TT
Sbjct: 168 ----------IERIFKMTP-PKKQTLFFSATMPPEITRLTKQFLRDPVRIEVARPATTNA 216
Query: 293 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 352
+L ++ S + K K L L AL++ G E IVF + + L G
Sbjct: 217 NITQLLVKVPS----SDPKAKRLALRALIEKAGIETGIVFCNRKTEVDIVAKSLKVHGYD 272
Query: 353 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
I G Q+ R KTL FR G +++LV+SD RG+D+ V++V NYD P +
Sbjct: 273 AAPIH---GDLDQTQRMKTLADFRSGALKILVASDVAARGLDIPAVSHVFNYDVPHHADD 329
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
Y+HR GRT RAG+ G + L+ + K F K+++
Sbjct: 330 YVHRIGRTGRAGRTGITYMLVTPADDKGFDKVIK 363
>gi|47937760|gb|AAH72323.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 429
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 187/443 (42%), Gaps = 110/443 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+GI PVQ + I P L RD + TGSGKT ++ LPI+Q LS L
Sbjct: 26 LGILKPSPVQ----ENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPFGIF-CL 80
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q IAE F +
Sbjct: 81 VLTPTRELAYQ---------------------IAEQ------------------FRVLGK 101
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+GL + +G + + EL ++P I++ATPGRL DH
Sbjct: 102 PLGLKDCIIIGGMDMVAQALELSRKPH---------------------IVIATPGRLADH 140
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
I ++ F+++ + +LV+DE DRLL + + D L +
Sbjct: 141 IRSSNTFSIKKIRFLVMDEADRLLEQGCTDFT---------------QDLQVILEAVPAQ 185
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPE 299
+T ++ SATLT +L + ++ P F +T E R E
Sbjct: 186 RQT--------------------LLFSATLTDTLQELKTVAMNKPFFWESTSEVRT--VE 223
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIK 355
+L+ ++ K+K YLV L+Q +E ++FT++ ++ L +L F +
Sbjct: 224 QLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVA 283
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
+ + +Q R L F+ ++L+++D RG+D+ V V+N++ P K YIH
Sbjct: 284 L---HSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 340
Query: 416 RAGRTARAGQLGRCFTLLHKDEV 438
R GRTARAG+ G TL+ + ++
Sbjct: 341 RVGRTARAGRNGMAITLVTQYDI 363
>gi|29612573|gb|AAH49396.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 482
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 189/445 (42%), Gaps = 114/445 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 58
+GI PVQ + I P L RD + TGSGKT ++ LPI+Q LS + CL
Sbjct: 23 LGILKPSPVQ----ENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPFGIFCL- 77
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
V+ PTR+LA Q IAE F +
Sbjct: 78 --VLTPTRELAYQ---------------------IAEQ------------------FRVL 96
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
+GL + +G + + EL ++P I++ATPGRL
Sbjct: 97 GKPLGLKDCIIIGGMDMVAQALELSRKPH---------------------IVIATPGRLA 135
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DHI ++ F+++ + +LV+DE DRLL + + D L +
Sbjct: 136 DHIRSSNTFSIKKIRFLVMDEADRLLEQGCTDFT---------------QDLQVILEAVP 180
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKL 297
+T ++ SATLT +L + ++ P F +T E R
Sbjct: 181 AQRQT--------------------LLFSATLTDTLQELKTVAMNKPFFWESTSEVRT-- 218
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELR 353
E+L+ ++ K+K YLV L+Q +E ++FT++ ++ L +L F
Sbjct: 219 VEQLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPS 278
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
+ + + +Q R L F+ ++L+++D RG+D+ V V+N++ P K Y
Sbjct: 279 VAL---HSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 335
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEV 438
IHR GRTARAG+ G TL+ + ++
Sbjct: 336 IHRVGRTARAGRNGMAITLVTQYDI 360
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 173/404 (42%), Gaps = 105/404 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 67
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 43 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 99
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q++ + F A+ ++G+
Sbjct: 100 LAFQIS---------------------------------------EQFEALGSSIGVQCA 120
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 121 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 159
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 160 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 199
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 307
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 200 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 240
Query: 308 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 367
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 241 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 297
Query: 368 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K
Sbjct: 298 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 341
>gi|294676409|ref|YP_003577024.1| ATP-dependent RNA helicase SrmB [Rhodobacter capsulatus SB 1003]
gi|294475229|gb|ADE84617.1| ATP-dependent RNA helicase SrmB [Rhodobacter capsulatus SB 1003]
Length = 548
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 188/442 (42%), Gaps = 118/442 (26%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN-RA-VRCLRA 59
G + P+Q I P L RD+ + TG+GKT S+ LP+V LS+ RA R R+
Sbjct: 21 GYETPTPIQAGA----IPPALEGRDVLGIAQTGTGKTASFTLPMVTMLSSGRARARMPRS 76
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV+ PTR+LA Q V + F A
Sbjct: 77 LVLCPTRELAAQ---------------------------------------VAENFDTYA 97
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L+ L +G G+ + +D L + VD+L+ATPGRL+D
Sbjct: 98 KYTRLTKALLIG-------------------GVSFGEQDKL--IDRGVDVLIATPGRLLD 136
Query: 180 HINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
H RG L + +VVDE DR+L F+P
Sbjct: 137 HFE--RGKLLLTGVQIMVVDEADRMLDMG-------------------------FIPD-- 167
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGE 292
+ER F+ P+ R + SAT+ + ++ LH P + TT E
Sbjct: 168 ----------IERIFQLTPFTRQT-LFFSATMAPEIERITNTFLHAPARIEVARQATTSE 216
Query: 293 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEE--KCIVFTSSVESTHRLCTLLNHFG 350
T + ++ + +K K L A+++S GE I+F + + L G
Sbjct: 217 TITQKLIQITPPRRDQSAKAKRELLRAIIKSEGEACTNAIIFCNRKTDVDIVAKSLKTHG 276
Query: 351 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 410
G QS+R+KTL AFR+G +Q+L++SD RG+D+ V++V NYD P++
Sbjct: 277 ---FNAAPIHGDLDQSLRTKTLDAFRDGSLQLLIASDVAARGLDIPAVSHVFNYDLPSHA 333
Query: 411 KTYIHRAGRTARAGQLGRCFTL 432
+ Y+HR GRT RAG+LG +++
Sbjct: 334 EDYVHRIGRTGRAGRLGTAYSI 355
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 181/444 (40%), Gaps = 112/444 (25%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G+ PVQ A + L +D+ + TGSGKT ++ALPI+Q L AL
Sbjct: 71 LGMRHPTPVQRACVPQI----LKGKDVLGMAQTGSGKTAAFALPILQRLGENPYGIF-AL 125
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA Q++ D F A+
Sbjct: 126 VMTPTRELAFQIS---------------------------------------DQFKALGA 146
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
V L + VG + + L++RP +++ATPGR+ H
Sbjct: 147 GVHLRCAVVVGGMDMTTQAQILMERPH---------------------VVIATPGRIKAH 185
Query: 181 INATRGFT--LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
I + +LV+DE D LL +Q L T+ F
Sbjct: 186 IGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTI----------------------F 223
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+ R+ ++ SAT+T D L L H F E K
Sbjct: 224 DGISKQRQT----------------LLFSATMTGDLQALRDLFGHRAFFYQAYEG-LKTV 266
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEE---KCIVFTSSVESTHRLCTLLNHFGELRIK 355
E L+ + K+K +YL LL++L E I+F S + H L +L+ G I
Sbjct: 267 ESLDQRYIFMPGKVKNVYLTYLLENLELEDIRSVIIFVSRCRTCHLLSLILDELG---IS 323
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
++ Q R L F+ G+ +L+++D +RG+D+ V+ VVNYD P + K Y+H
Sbjct: 324 AVALHSVKTQPQRLAALNQFKSGQATILIATDVASRGLDIPTVDLVVNYDIPRFTKDYVH 383
Query: 416 RAGRTARAGQLGRCFTLLHKDEVK 439
R GRTARAG+ GR +L+ + +V+
Sbjct: 384 RVGRTARAGRGGRAISLVTELDVE 407
>gi|307173483|gb|EFN64393.1| Probable ATP-dependent RNA helicase DDX27 [Camponotus floridanus]
Length = 694
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 215/477 (45%), Gaps = 119/477 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L R + R LV++P
Sbjct: 139 PIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPAVSRVLVLVP 194
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF ++
Sbjct: 195 TRELGVQV------------------YQVTKQLTQFTTV--------------------- 215
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VGL+VG + + S L K P DI++ATPGRL+DH+N
Sbjct: 216 EVGLSVGGLDVKVQESVLRKNP---------------------DIVIATPGRLIDHLNNA 254
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L ++ L++DE DR+L E + + + +
Sbjct: 255 PTFSLNNIEVLILDEADRMLDEYFAEQMKYI----------------------------V 286
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 301
++C + ++ SAT+T++ LA + L++P+ + + + + L R
Sbjct: 287 KQCARTKQT----------ILFSATMTEEVKDLAAVSLNNPIKIFVDSNQDVAFNL--RQ 334
Query: 302 ESYKLICESK-LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
E ++ E + + L AL+ + ++F + + HRL LL L +K+ E
Sbjct: 335 EFIRIRKEREGDREAILAALVCRTFHDHTMIFVQTKKQAHRLHILLGL---LGLKVGELH 391
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R + L+ F+E +I +L+++D RG+D+ GV V+N+ PA ++ YIHR GRT
Sbjct: 392 GNLTQPQRLENLQKFKEEEIDILLATDVAARGLDISGVKTVINFMMPATLQHYIHRVGRT 451
Query: 421 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLRPVYKSGDV 475
ARAG+ G +L + E K+++++A N PI + IP +IE +S +V
Sbjct: 452 ARAGRGGVSVSLAGEQERFLVKEIIKQAKN---PIKNRIIPPDIIEKYNKKLQSLEV 505
>gi|328778605|ref|XP_001122266.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Apis
mellifera]
Length = 739
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 207/465 (44%), Gaps = 117/465 (25%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 64
P+Q A TI L RD+C + TG+GKT +Y LP ++ L R + R LV++P
Sbjct: 181 PIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPAISRVLVLVP 236
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+L +QV + + + QF ++
Sbjct: 237 TRELGVQV------------------YQVTKQLSQFTTI--------------------- 257
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 184
VGL+VG + + + L + P DI++ATPGRL+DH+ T
Sbjct: 258 EVGLSVGGLDVKAQEAVLRRNP---------------------DIVIATPGRLIDHLKNT 296
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
F+L+ + L++DE DR+L E + + + +
Sbjct: 297 PTFSLDSIEVLILDEADRMLDEYFAEQMKYI----------------------------V 328
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPERL 301
++C R ++ SAT+T++ LA + L+ P+ F+ + + + L +
Sbjct: 329 KQCSRSRQ----------TILFSATMTEEVKDLAAVSLNKPVKVFIDSNQDVAFNLRQEF 378
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ E + + L AL+ + +VF V++ + L G L IK+ E G
Sbjct: 379 IRIRKEREGDREAI-LAALICRTFHDHVMVF---VQTKKQAHRLHILLGLLGIKVGELHG 434
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
Q R + L F+ +I +L+++D RG+D+ GV V+N+ PA ++ YIHR GRTA
Sbjct: 435 NLTQPQRLENLTKFKNEEIDILLATDVAARGLDISGVKTVINFVMPATMQHYIHRVGRTA 494
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIE 464
RAG++G +L + E K++++ A N P+ + IPS +I+
Sbjct: 495 RAGRVGVSVSLAGEQERSLVKEIIKNAKN---PVKNRIIPSDIID 536
>gi|281207583|gb|EFA81766.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 802
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 194/449 (43%), Gaps = 110/449 (24%)
Query: 3 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR---- 58
+++ F A+ ++ L RD+ + TGSGKTL++ LP V ++ +
Sbjct: 414 VAAGFAAPTAIQAQSWPVALKGRDMIGLAETGSGKTLAFLLPGVVHINAQPFLEPNDGPI 473
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD--VFA 116
LV+ PTR+LA M +Q + F S ++K+ V+
Sbjct: 474 MLVLAPTRELA--------------------------MQIQAECDKFGSSSKIKNCAVYG 507
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
+ PK + +L+S V+I++ATPGR
Sbjct: 508 GV---------------------------PKFQQ---------TSQLRSGVEIVIATPGR 531
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+D + TR L+ + YLV+DE DR+L ++ + +L R D + T + S
Sbjct: 532 LIDLL-ETRKTNLKRVTYLVLDEADRMLDMGFEDQIRKILSQIRPDRQ-------TLMFS 583
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
A +P++V+ LA L P+ + G
Sbjct: 584 A-------------------TWPKVVQ------------SLANDFLKDPIQIKIGSAELS 612
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ ICE K L + L+ +G+EKCI+F +E+ + + L + K
Sbjct: 613 ANHNVKQIIEICEKNDKQQRLFSFLEKVGDEKCIIF---METKNGVNLLQRNMQVAGFKC 669
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
G + Q R +L+ F++ IQ+L+++D +RG+DV+ + V+NYD P I++YIHR
Sbjct: 670 AGIHGDKTQGERDYSLQQFKKSGIQMLIATDVASRGLDVKDIKYVINYDFPNTIESYIHR 729
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLL 445
GRT RAG G FTL ++++ +L+
Sbjct: 730 IGRTGRAGATGTAFTLFTTNDMRLAGELI 758
>gi|21228658|ref|NP_634580.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
gi|20907159|gb|AAM32252.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
Length = 429
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 200/445 (44%), Gaps = 107/445 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F A+ +++I L D+ + TGSGKTLS+A I+Q ++ + ++AL++ PTR
Sbjct: 49 FESPTAIQEKSIPLILAGEDVIGGAATGSGKTLSFASGILQ--NSEKGKGIQALILTPTR 106
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA QV ++ K+ ++D L A+I VG++
Sbjct: 107 ELAEQVANSLRKFS------------------KYDPL----------NIASIYGGVGINT 138
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ +EL++A +++V TPGRL+DHI +
Sbjct: 139 QI--------------------------------KELKNA-EVVVGTPGRLLDHI-SRNT 164
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
L ++ LV+DE D + + +
Sbjct: 165 IKLNNVKTLVLDEADHMFDMGF-------------------------------------K 187
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
VE+ K+ P R ++ SAT+T+D +L++ + +P+ ++T Y P++L
Sbjct: 188 VDVEKIIKECPQNRQT-LLFSATITKDIVRLSRKYMENPVRVST--ESYIDPQKLNQVVY 244
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ +K LV LLQ+ +VF ++ +T ++ L + I + GL Q+
Sbjct: 245 KVQDDMKLSLLVYLLQNEKSNLGMVFCNTKRNTDKVAKNLRKSSINAVAI--HGGLT-QN 301
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R++ L+ F G I VLV +D RG+D++GV++V NYD P K YIHR GRTARAG
Sbjct: 302 ERTRILEKFHSGNIGVLVCTDVAGRGLDIQGVSHVYNYDIPRESKQYIHRIGRTARAGTE 361
Query: 427 GRCFTLLHKDEVKRFKKLLQKADND 451
G+ +L K++ F +L+ D D
Sbjct: 362 GKAINILSKNDHANFMSVLKDNDVD 386
>gi|333991566|ref|YP_004524180.1| ATP-dependent RNA helicase RhlE [Mycobacterium sp. JDM601]
gi|333487534|gb|AEF36926.1| ATP-dependent RNA helicase RhlE [Mycobacterium sp. JDM601]
Length = 508
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 191/464 (41%), Gaps = 119/464 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL---- 57
GI F +Q + T+ L DL + TG GKT + +P++Q +S R L
Sbjct: 33 GIERAFAIQ----ELTLPLALAGDDLIGQARTGMGKTYGFGVPLLQRVSTSTDRPLTGIP 88
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 117
RALVV+PTR+L C + G +AD A+ D L +
Sbjct: 89 RALVVVPTREL------------CIQVSGDLAD--AAKYLTAGDRPLSVQ---------- 124
Query: 118 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 177
+ G Y+P+ ++ LQ+ D++V TPGRL
Sbjct: 125 -----------------------------AIYGGRPYEPQ--IEALQAGADVVVGTPGRL 153
Query: 178 MDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
+D A +G L L LV+DE D +L FLP
Sbjct: 154 LDL--AQQGHLQLGGLTVLVLDEADEMLDLG-------------------------FLPD 186
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
+ER P R M+ SAT+ LA+ ++ P + R +
Sbjct: 187 ------------IERILARIPDDRQ-SMLFSATMPGPIITLARSFMNQPTHI-----RAE 228
Query: 297 LP------ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
P + E + + K + +LQ+ G ++FT + + ++ + G
Sbjct: 229 APHSSAVHDATEQFVYRAHALDKAELVARVLQARGRGATMIFTRTKRTAQKVA---DDLG 285
Query: 351 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 410
E K+ G Q R K LKAFR G I VLV++D RG+D++ V +VVNY P
Sbjct: 286 ERGFKVGAVHGDLNQVAREKALKAFRTGDIDVLVATDVAARGIDIDDVTHVVNYQCPDDE 345
Query: 411 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 454
KTY+HR GRT RAG+ G TL+ DE+ R+ ++ KA N CP
Sbjct: 346 KTYVHRIGRTGRAGKTGVAVTLVDWDELARW-SMIDKALNLQCP 388
>gi|407645090|ref|YP_006808849.1| RNA helicase [Nocardia brasiliensis ATCC 700358]
gi|407307974|gb|AFU01875.1| RNA helicase [Nocardia brasiliensis ATCC 700358]
Length = 580
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 196/470 (41%), Gaps = 118/470 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR--A 59
GI + FP+Q A T+ L +D+ PTGSGKTL++ LP++ L+ A + R
Sbjct: 32 GIEAPFPIQAA----TVPDALAGKDVLGRGPTGSGKTLAFGLPMLARLAGAASQPGRPRG 87
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV++PTR+LA Q+ A A A
Sbjct: 88 LVLVPTRELAAQIERA---------------------------------------LDAPA 108
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
A+GL V VG + I + L + VD+L+ATPGRL D
Sbjct: 109 LALGLRVASVVGGAPIKRQADRLAR---------------------GVDLLIATPGRLAD 147
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
+ R +L + +DE D + A +LP V +L + D L SA
Sbjct: 148 LV-MQRSASLADVRITALDEADHM---ADMGFLPQVTKLL----DQTPKDGQRLLFSA-- 197
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD---PNKLAQLDLHHPLFLTTGETRYK 296
T+ D +LVK L + +T P HH LF+ R K
Sbjct: 198 ---TL----------DGEVDKLVKRYLRSPVTHSTAPPAASVATMTHHLLFV-----RDK 239
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
L +R + ++ L I+F + RL L G I
Sbjct: 240 LAKRAVASEIAAREGL----------------TIMFVRTKHGADRLAKQLRGVG---IPA 280
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
G + Q+ R++TL AF +G + VLV++D RG+ V+G++ VV+ D PA K Y+HR
Sbjct: 281 GALHGGKAQNNRTRTLAAFADGSVPVLVTTDVAARGIHVDGISLVVHVDPPAESKAYLHR 340
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS--SLIE 464
AGRTARAG+ G TL+ +E + + + +KA D I P +LIE
Sbjct: 341 AGRTARAGEDGVVVTLVMDEERRDVESMTRKAGVDIKGIAVRPGDRTLIE 390
>gi|390341643|ref|XP_784918.3| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Strongylocentrotus purpuratus]
Length = 718
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 208/497 (41%), Gaps = 102/497 (20%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-----ALV 61
F V Q I L +D I S TG+GKTL+YA+P+VQ L + R AL+
Sbjct: 134 FSQMTTVQQRAIPTLLHGQDTLIKSQTGTGKTLAYAVPVVQQLQGLQPKVQRLHGPYALI 193
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
++PTR+LA C F++L+ + P F I P
Sbjct: 194 LVPTRELA---------------------------CQSFETLVKLVKP-----FHWIVPG 221
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
V L G+ + K E G ++ ++ILV+TPGRL+DHI
Sbjct: 222 V-----LMGGE------------KKKSEKG----------RIRKGINILVSTPGRLVDHI 254
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
N T T + ++++DE DRLL ++ + T+L NE + T L SA S
Sbjct: 255 NTTEALTFSRVRWVILDEADRLLDLGFEKDVTTILNAI---NEQCQNQKQTVLVSATLSE 311
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATL-----------TQD---PNKL-AQLDLHHPL 286
R + KD + + K L L T++ P K +Q +
Sbjct: 312 GVKRLANIT--LKDPVFIDVAKHQLDKALPPAPWSASSSSTEEKLRPAKTGSQTEETGEG 369
Query: 287 FLTTGETRYKLPERLESYKLICESKLKPLYLVALL----QSLGEEKCIVFTSSVESTH-- 340
+ +PERL+ I SKL+ + L AL+ +S K +VF SS ES
Sbjct: 370 ETGEDAEMFSVPERLKQQFAIVPSKLRLVALTALVAGGFKSPSGCKMLVFLSSCESVDFH 429
Query: 341 -------RLCTLLNHFGELR----IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
+ C++L G + + G Q+ R K AF E + VL+ +D
Sbjct: 430 YTLFQACKGCSILKEDGTASKREGMPLFRLHGSMSQAERIKMYHAFSEARKGVLLCTDVA 489
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL-LQKA 448
RG+D+ V +V Y+ P Y+HR GRTAR G+ G+ L EV+ + L Q+
Sbjct: 490 ARGLDLPKVKWIVQYNIPGSAADYVHRVGRTARIGKEGQALLFLAPSEVEYIRILEEQQI 549
Query: 449 DNDSCPIHSIPSSLIES 465
P+ I SSL+ S
Sbjct: 550 RIKEQPLDDILSSLMTS 566
>gi|291000284|ref|XP_002682709.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096337|gb|EFC49965.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
Length = 955
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 183/453 (40%), Gaps = 122/453 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
+ ++ I P L +++ S TGSGKT ++ALPI+Q L+ + + + AL++ P R+LA+Q+
Sbjct: 162 IQEKCIPPTLAGKNVIGMSQTGSGKTAAFALPIIQNLA-KDMYGIYALIITPARELAIQI 220
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
K F +A + + V L VG
Sbjct: 221 ---------------------------------------KQHFEILAGDLPIRVALLVG- 240
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT---- 188
G+ Y + L L S+ I+V TPGR+ D A R F
Sbjct: 241 ------------------GMDYLKQAHL--LDSSPHIVVGTPGRIED---AIRTFNNDGY 277
Query: 189 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 248
+ + YLV DE DR+ Y L +L ++
Sbjct: 278 FKKIKYLVFDEADRIFSMDYSLDLDRILSVSN---------------------------- 309
Query: 249 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL----------HHPLFLTTGETRYKLP 298
P+ ++ SAT+ KLA++ + L++ ++L
Sbjct: 310 ----------PKRQTLLYSATMNNQVKKLAKMAMSNSGKTKEEREQSLYIYDACKLFQLA 359
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEK-CIVFTSSVESTHRLCTLLNHFGEL-RIKI 356
+ L Y L +K Y V L+ SL + IVF S + C L+N L I
Sbjct: 360 DNLSQYYLFMPEHVKDAYFVQLINSLPDNSISIVFFSDITQ----CELMNQTCRLLGISC 415
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
+ Q R LK FR+ +++ L +D RG+D+ V V+NYD P Y+HR
Sbjct: 416 DSLHASKSQKERFAVLKYFRKRRLKFLFCTDVANRGLDIPAVGYVINYDLPDTTDKYVHR 475
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 449
GRTARAG+LG C +L+ + EVKR K + D
Sbjct: 476 VGRTARAGRLGVCISLISQFEVKRIKAIESDTD 508
>gi|389594423|ref|XP_003722434.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania major
strain Friedlin]
gi|323363662|emb|CBZ12667.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania major
strain Friedlin]
Length = 405
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 183/444 (41%), Gaps = 106/444 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
V +E I L +D+ + G+GKT S+ +P+++ + R + ++AL+++PTR+LALQ
Sbjct: 56 VQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTREL-YVQALLMVPTRELALQT 114
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
QV P GL V + G
Sbjct: 115 ------------------------------------AQVTKELGKHIP--GLEVMVTTGG 136
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+++ D+I L S V ILVATPGR++D + + + L H
Sbjct: 137 TTLRDDILRLT---------------------SKVHILVATPGRVLD-LASKKAVDLSHC 174
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE D+LL + + + D T+LPS S
Sbjct: 175 HILVLDEADKLLSQEFMEII---------------DDLYTYLPSQLQS------------ 207
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESK 311
M+ SAT A+ LH+P + E K + Y E +
Sbjct: 208 -----------MLFSATFPVTVKTFAERHLHNPYEINLMDELTLK---GVTQYYAFVEER 253
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K L L L + I+F +SV L + G I ++ +Q+Q R++
Sbjct: 254 QKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYI--HARMQQQH-RNRV 310
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
FREG + LV SD +TRG+D++ VN V+N+D P Y +TY+HR GR+ R G LG
Sbjct: 311 FHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAIN 370
Query: 432 LLHKDEVKRFKKLLQKADNDSCPI 455
+ D+ ++ Q+ D + PI
Sbjct: 371 FVTYDDRYNVYRIEQELDTEIKPI 394
>gi|282599579|ref|ZP_05971084.2| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
gi|282568585|gb|EFB74120.1| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
Length = 457
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 199/468 (42%), Gaps = 123/468 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVR 55
+G S P+Q Q+ I L DL ++ TG+GKT + LPI+Q L S R
Sbjct: 27 LGYDSPTPIQ----QQAIPAVLAGNDLLASAQTGTGKTAGFTLPILQKLVDAPRSGNNRR 82
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
+RAL++ PTR+LA QV ++ E + F+ VF
Sbjct: 83 PIRALILTPTRELAAQVA-----------------ENVKEYSRHLNIRSFV-------VF 118
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
+ SI ++ KL +G+ DVL +ATPG
Sbjct: 119 GGV---------------SINPQMM------KLRSGV-----DVL----------IATPG 142
Query: 176 RLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 233
RL+D H NA L + LV+DE DR+L
Sbjct: 143 RLLDLEHQNA---VDLSQVEILVLDEADRML----------------------------- 170
Query: 234 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 293
G + IRR P R ++ SAT + D +LA L++P+ +
Sbjct: 171 ---DMGFIHDIRRV-----ITKLPKKRQ-NLLFSATFSDDIKQLASKLLNNPVSIEVA-P 220
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
R E++ Y + + K K L ++ ++ +VFT + +RL LN G
Sbjct: 221 RNSASEQVTQYVHLVDKKRKAELLSFMIGRENWQQVLVFTRTKHGANRLAEHLNKDG--- 277
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
IK G + Q R++ L F+ G I+VLV++D RG+D+E + +VVN++ P + Y
Sbjct: 278 IKSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEQLPHVVNFELPNVAEDY 337
Query: 414 IHRAGRTARAGQLGRCFTLLHKDEVKRFK---KLLQKADNDSCPIHSI 458
+HR GRT RA G+ +L+ DEVK K KLL+K S P+ +I
Sbjct: 338 VHRIGRTGRAEATGQAISLVCIDEVKLLKDIEKLLKK----SIPVMAI 381
>gi|392404056|ref|YP_006440668.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
gi|390612010|gb|AFM13162.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
Length = 424
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 190/439 (43%), Gaps = 107/439 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F + +E I L +D+ + TG+GKT ++ LP+++ LS + R +RALVV PTR
Sbjct: 22 FKAPTPIQKEAIPHALAGKDILGLAQTGTGKTAAFVLPMLEKLSAQPARKIRALVVAPTR 81
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA Q++ I L D + M +
Sbjct: 82 ELAEQIHQV--------IVTLGKDTRLQSMTI---------------------------- 105
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
G +S+ ++ EL K VDI+VA PGRL+DH+ +
Sbjct: 106 ---YGGASMNRQLGELRK---------------------GVDIVVACPGRLLDHLQ-RKS 140
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
TL+ + LV+DE D++ +LP + Q+ + R +
Sbjct: 141 LTLDAVETLVLDEADQMFD---MGFLPAIKQIVAKLPQKRQT------------------ 179
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
M+ SAT+ ++ KL+ L P+ + + P S+ L
Sbjct: 180 -----------------MLFSATMPEEIRKLSAQILREPVKVELA----RGPVATISHAL 218
Query: 307 I-CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
+LK L+ LL+ G++ +VFT ++ H+ L + + G Q
Sbjct: 219 YPVTHELKTPLLLHLLKDAGDQPILVFT---KTKHKATRLADQLAKAGFTTASLQGNLSQ 275
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
+ R L F+ GK Q+LV++D RG+DV +++++NYD PA +TYIHR GRTARA +
Sbjct: 276 NRRDSALAGFKSGKYQILVATDIAARGIDVNNISHIINYDIPASSETYIHRIGRTARATK 335
Query: 426 LGRCFTLLHKDEVKRFKKL 444
G +T + ++ ++ +++
Sbjct: 336 SGDAYTFVTSEDNRQVREI 354
>gi|440798652|gb|ELR19719.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 906
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 196/462 (42%), Gaps = 96/462 (20%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS-------NRAV 54
G P+Q+ ++I GL RDL + TGSGKT ++ LP++ +S A
Sbjct: 494 GYKQPMPIQM----QSIPIGLQGRDLIGLAETGSGKTCAFVLPMLVYISKLPPMTAENAA 549
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
AL++ PTR+LALQ+ K+
Sbjct: 550 DGPYALIMAPTRELALQIEQEAAKF----------------------------------- 574
Query: 115 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 174
A A+G VG SI E G L+ +IL+ATP
Sbjct: 575 ----ASAMGFRTVAVVGGQSIE------------EQGFS---------LRRGAEILIATP 609
Query: 175 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 234
GRL+D + R L Y+V+DE DR++ ++ + T+L S N S+ T
Sbjct: 610 GRLVDCLE-QRYVVLNQCNYVVLDEADRMVDMGFEVQVTTILDAMPSSNLK--SEDETTA 666
Query: 235 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-- 292
+L+ + V R ++ SAT+ +LA+ L HP + GE
Sbjct: 667 EEQMAALQEEKPDHVYR----------TTVMFSATMPVAVERLARKYLRHPAVIQIGEVG 716
Query: 293 -TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 351
K+ +R+E K + K K L+ LL S +VF + ++ L +N G
Sbjct: 717 KAGEKIEQRVEFVKGDNDKKNK---LLNLLYSGIAPPIMVFVNQKKNCDILSRAINKAGF 773
Query: 352 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 411
+ +SG + Q +R + + F+ G I +LVS+D RG+DV+GV +V+NYD I
Sbjct: 774 RSATL--HSG-KSQELREEAMDGFKAGTIDILVSTDVAGRGIDVKGVTHVINYDMAKSIA 830
Query: 412 TYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQKADN 450
Y HR GRT RAG G + + D+ F K++LQ + N
Sbjct: 831 DYTHRIGRTGRAGMKGVAVSFITNDDADLFYDLKQMLQASGN 872
>gi|85711377|ref|ZP_01042436.1| ATP-dependent RNA helicase [Idiomarina baltica OS145]
gi|85694878|gb|EAQ32817.1| ATP-dependent RNA helicase [Idiomarina baltica OS145]
Length = 423
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 49/297 (16%)
Query: 150 AGICYDPEDVLQELQSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREA 207
G+ +P+ + +L+ VDILVATPGRL+D NA R L LV+DE DR+L
Sbjct: 109 GGVKINPQ--MMKLRKGVDILVATPGRLLDLYQQNAIR---FPQLETLVLDEADRMLDMG 163
Query: 208 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 267
+ + +++L + +N ++ S
Sbjct: 164 FIHDIKKIIKLLPAKRQN--------------------------------------LMFS 185
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
AT + + KLA+ +++P+ ++ ER+E E KP L+ +L++L
Sbjct: 186 ATFSDEIRKLAKSLVNNPVEISVAAPNATA-ERIEQTLYAAEKTHKPRMLMQILRNLNLP 244
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
+ IVF+ + +RL L+ G L I G + Q R+K L F+ G +QVLV++D
Sbjct: 245 QVIVFSRTKHGANRLVKQLDKDGFLAAAI---HGNKSQGARTKALSDFKSGAVQVLVATD 301
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
RG+D+E + V+NYD P + Y+HR GRT RAGQ+G +L+ +E + K +
Sbjct: 302 IAARGLDIEKLPYVINYDLPQVAEDYVHRIGRTGRAGQVGHAISLVMDEEFRTLKAI 358
>gi|452211065|ref|YP_007491179.1| ATP-dependent RNA helicase [Methanosarcina mazei Tuc01]
gi|452100967|gb|AGF97907.1| ATP-dependent RNA helicase [Methanosarcina mazei Tuc01]
Length = 389
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 200/445 (44%), Gaps = 107/445 (24%)
Query: 7 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 66
F A+ +++I L D+ + TGSGKTLS+A I+Q ++ + ++AL++ PTR
Sbjct: 9 FESPTAIQEKSIPLILAGEDVIGGAATGSGKTLSFASGILQ--NSEKGKGIQALILTPTR 66
Query: 67 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
+LA QV ++ K+ ++D L A+I VG++
Sbjct: 67 ELAEQVANSLRKFS------------------KYDPL----------NIASIYGGVGINT 98
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 186
+ +EL++A +++V TPGRL+DHI +
Sbjct: 99 QI--------------------------------KELKNA-EVVVGTPGRLLDHI-SRNT 124
Query: 187 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 246
L ++ LV+DE D + + +
Sbjct: 125 IKLNNVKTLVLDEADHMFDMGF-------------------------------------K 147
Query: 247 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 306
VE+ K+ P R ++ SAT+T+D +L++ + +P+ ++T Y P++L
Sbjct: 148 VDVEKIIKECPQNRQT-LLFSATITKDIVQLSRKYMKNPVRVST--ESYIDPQKLNQVVY 204
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
+ +K LV LLQ+ +VF ++ +T ++ L + I + GL Q+
Sbjct: 205 KVQDDMKLSLLVYLLQNEKSNLGMVFCNTKRNTDKVAKNLRKSSINAVAI--HGGLT-QN 261
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R++ ++ F G I VLV +D RG+D++GV++V NYD P K YIHR GRTARAG
Sbjct: 262 ERTRIMEKFHSGNIGVLVCTDVAGRGLDIQGVSHVYNYDIPRESKQYIHRIGRTARAGTE 321
Query: 427 GRCFTLLHKDEVKRFKKLLQKADND 451
G+ +L K++ F +L+ D D
Sbjct: 322 GKAINILSKNDHANFMSVLKDNDVD 346
>gi|167539739|ref|XP_001741236.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165894254|gb|EDR22313.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 406
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 182/439 (41%), Gaps = 120/439 (27%)
Query: 35 SGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIA 89
SGKT S+ LP++Q L NRA C+ ++ PTR+LA
Sbjct: 43 SGKTASFLLPMIQHLLNVKEKNRAFYCI---IIEPTRELA-------------------- 79
Query: 90 DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKL 148
QV +V I A+ GL L VG + + +L KRP
Sbjct: 80 -------------------AQVVEVLDEIGKALPGLMSCLLVGGMDVMKQSVQLAKRP-- 118
Query: 149 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF--TLEHLCYLVVDETDRLLRE 206
++V TPGR++ HI T+G +++ + +LV+DE D+LL
Sbjct: 119 -------------------HVIVGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLL-- 157
Query: 207 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 266
E F++ +L S +T M+
Sbjct: 158 -----------------EMDFANEIDYLIEKLPSQRTT-------------------MLF 181
Query: 267 SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 326
SAT++ KL + L HP+ + E +Y+ + L K + YL+++L+
Sbjct: 182 SATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDGYLLSILKETEG 241
Query: 327 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 386
+ I+FT +L +L G I + G Q R L+ F+ GK +LV++
Sbjct: 242 KSIIIFTMKCSGCTKLVMMLRQLGYAAIPL---HGKMSQQKRLIALEKFKSGKRGILVAT 298
Query: 387 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF----- 441
D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G TL+ + ++ +
Sbjct: 299 DVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAGKSGYAITLVTQYSIELYQRIET 358
Query: 442 ---KKLLQKADNDSCPIHS 457
KKL + ND+ I S
Sbjct: 359 MIEKKLNEYKANDAMRIVS 377
>gi|170592549|ref|XP_001901027.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591094|gb|EDP29707.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 452
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 160/327 (48%), Gaps = 50/327 (15%)
Query: 144 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 203
KRP L A D + L+ DI++ATPGRL+DH++ F+L + LV+DE DR+
Sbjct: 13 KRPMLLANGGLDLKTQEAALRQRPDIVIATPGRLIDHLHNAPNFSLADVEILVLDEADRM 72
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L EA+ + ++ L C R
Sbjct: 73 LDEAFSIQMKEIMHL----------------------------CARNRQ----------T 94
Query: 264 MVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQ 322
M+ SAT+T +LA + L +P+ L +G T L R E ++ + +VA L
Sbjct: 95 MLFSATMTDQIEELAAVSLKNPVKLFISGNTETALNLRQEFVRIRENHEADRECIVAGLV 154
Query: 323 SLG-EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE-YSGL-QRQSVRSKTLKAFREGK 379
+ + I+F + ++ RL +L G L K+ + +SGL QRQ V + L F++ +
Sbjct: 155 TRNFPDHTIIFVKTKKTCRRLHIVL---GLLGAKVGQLHSGLTQRQRV--EALFRFKKAE 209
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
+ VLVS+D RG+DVEGV V+N D P +K YIHR GRTARAG++GR +L+ + E K
Sbjct: 210 LDVLVSTDLAARGLDVEGVKTVINMDMPTTLKQYIHRVGRTARAGRVGRSISLVGESERK 269
Query: 440 RFKKLLQKADNDSCPIHSIPSSLIESL 466
K+++ D + + IESL
Sbjct: 270 ILKEIVASNKEDVIDAY---KNRIESL 293
>gi|47228482|emb|CAG05302.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 194/479 (40%), Gaps = 132/479 (27%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-- 58
+ S + PVQ A I + +D+ + TGSGKTL++ +PI++ L R + +
Sbjct: 27 LKFSHMTPVQSAC----IPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKLKKMQ 82
Query: 59 --ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
ALV+ PTR+LALQ I+++ QF PQ +
Sbjct: 83 VGALVITPTRELALQ---------------------ISQVMEQF----LQRFPQFTQIL- 116
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L G + I EDV + +I++ATPGR
Sbjct: 117 -----------LIGGSNPI---------------------EDVEKFKDQGANIVIATPGR 144
Query: 177 LMDHINATRGFTLEHLCY------LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
L D + L+ C+ LV+DE DRLL ++A L +L
Sbjct: 145 LEDMFK-RKADGLDLACWVKSLEVLVLDEADRLLDMGFEASLNAIL-------------- 189
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 290
G L RR G+ SAT TQ+ KL + L +P+ +T
Sbjct: 190 --------GHLPKQRRTGL----------------FSATQTQELEKLVRAGLRNPVRITV 225
Query: 291 GETR------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 344
E K P RL +Y IC S+ K +LVA L+ EK +VF S+ C
Sbjct: 226 KEKGAAASAVQKTPSRLSNYYTICRSEDKFNHLVAFLRQHKHEKNLVFFST-------CA 278
Query: 345 LLNHFGE-LRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 399
+ +FG L IK+ + + + R+K FR K +LV +D M RG+D+ VN
Sbjct: 279 CVEYFGRALETLIKKANVCCIHGKMKDKRNKIFAEFRSLKSGILVCTDVMARGIDIPDVN 338
Query: 400 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
V+ YD P+ ++HR GRTAR G G L E L + N CP+ +
Sbjct: 339 WVLQYDPPSSASAFVHRCGRTARIGNQGNALVFLLPMEESYVNFL---SINQKCPLQKM 394
>gi|398022937|ref|XP_003864630.1| ATP-dependent DEAD-box RNA helicase, putative [Leishmania donovani]
gi|322502866|emb|CBZ37948.1| ATP-dependent DEAD-box RNA helicase, putative [Leishmania donovani]
Length = 405
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 182/444 (40%), Gaps = 106/444 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
V +E I L +D+ + G+GKT S+ +P+++ + R ++AL+++PTR+LALQ
Sbjct: 56 VQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRE-SYVQALLMVPTRELALQT 114
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
QV P GL V + G
Sbjct: 115 ------------------------------------AQVTKELGKHIP--GLEVMVTTGG 136
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+++ D+I L S V ILVATPGR++D + + + L H
Sbjct: 137 TTLRDDILRLT---------------------SKVHILVATPGRVLD-LASKKAVDLSHC 174
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE D+LL + + + D T+LPS S
Sbjct: 175 HILVLDEADKLLSQEFMEII---------------DDLYTYLPSQLQS------------ 207
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESK 311
M+ SAT A+ LH+P + E K + Y E +
Sbjct: 208 -----------MLFSATFPVTVKTFAERHLHNPYEINLMDELTLK---GVTQYYAFVEER 253
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K L L L + I+F +SV L + G I ++ +Q+Q R++
Sbjct: 254 QKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYI--HARMQQQH-RNRV 310
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
FREG + LV SD +TRG+D++ VN V+N+D P Y +TY+HR GR+ R G LG
Sbjct: 311 FHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAIN 370
Query: 432 LLHKDEVKRFKKLLQKADNDSCPI 455
+ D+ ++ Q+ D + PI
Sbjct: 371 FVTYDDRYNVYRIEQELDTEIKPI 394
>gi|401429120|ref|XP_003879042.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495292|emb|CBZ30595.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 405
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 182/444 (40%), Gaps = 106/444 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
V +E I L +D+ + G+GKT S+ +P+++ + R ++AL+++PTR+LALQ
Sbjct: 56 VQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRE-SYVQALLMVPTRELALQT 114
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
QV P GL V + G
Sbjct: 115 ------------------------------------AQVTKELGKHIP--GLEVMVTTGG 136
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+++ D+I L S V ILVATPGR++D + + + L H
Sbjct: 137 TTLRDDILRLT---------------------SKVHILVATPGRVLD-LASKKAVDLSHC 174
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE D+LL + + + D T+LPS S
Sbjct: 175 HILVLDEADKLLSQEFMEII---------------DDLYTYLPSQLQS------------ 207
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESK 311
M+ SAT A+ LH+P + E K + Y E +
Sbjct: 208 -----------MLFSATFPVTVKTFAERHLHNPYEINLMDELTLK---GVTQYYAFVEER 253
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K L L L + I+F +SV L + G I ++ +Q+Q R++
Sbjct: 254 QKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYI--HARMQQQH-RNRV 310
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
FREG + LV SD +TRG+D++ VN V+N+D P Y +TY+HR GR+ R G LG
Sbjct: 311 FHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAIN 370
Query: 432 LLHKDEVKRFKKLLQKADNDSCPI 455
+ D+ ++ Q+ D + PI
Sbjct: 371 FVTYDDRYNVYRIEQELDTEIKPI 394
>gi|329847732|ref|ZP_08262760.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
gi|328842795|gb|EGF92364.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
Length = 606
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 180/423 (42%), Gaps = 107/423 (25%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTL-SNRAV---RCLRALVVLPTRDLALQVNSARCKYCC 81
DL + TG+GKT ++ALPI+Q L SNR + + +RAL++ PTR+LA Q+ +
Sbjct: 41 DLLGIAQTGTGKTAAFALPILQHLLSNRKMPSPKMVRALILSPTRELASQIAES------ 94
Query: 82 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 141
F + +GL + G
Sbjct: 95 ---------------------------------FKTYSKGMGLQIATIYG---------- 111
Query: 142 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 201
G+ Y P+ + L +D+LV TPGRL+DHI + L + V+DE D
Sbjct: 112 ---------GVKYGPQ--YKALLGGLDVLVCTPGRLIDHIE-QKTVDLSQVECFVLDEAD 159
Query: 202 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 261
++L + + V +N F A+ +P G
Sbjct: 160 QMLDLGFVKPIRQVASRLPKKRQNLFFSAT--MPKEIG---------------------- 195
Query: 262 VKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL 321
VL++ L DP ++ +T T ER+ L E++ K L +
Sbjct: 196 ---VLASELLTDPKRVE---------ITPEAT---TAERVSQQVLFIEAQRKRALLSEMY 240
Query: 322 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 381
E+ +VFT + S R+ L G ++ G + QS R + L+AFR GK++
Sbjct: 241 ADAVLERTLVFTRTKRSADRVAAYLQAGG---VEAAAIHGDKNQSQRERALQAFRAGKVR 297
Query: 382 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
LV++D RG+DV+ V++V+NY+ P + Y+HR GRTARAG+ G TL DE +
Sbjct: 298 ALVATDIAARGIDVDNVSHVINYELPNVAEAYVHRIGRTARAGKSGVSITLCADDERRLL 357
Query: 442 KKL 444
K +
Sbjct: 358 KDI 360
>gi|115397383|ref|XP_001214283.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192474|gb|EAU34174.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 853
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 50/306 (16%)
Query: 2 GISSLFPVQVAVWQETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
G F VQ AV + GP DLCI++ TGSGKTLSY LP+V L +R L
Sbjct: 259 GYKEAFAVQSAVIPLLLKGPRNHPGDLCISAATGSGKTLSYVLPLVTALEQAPAPRMRGL 318
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+V+PTR+L Q A C+ C GL ++ + ++ + + + QV
Sbjct: 319 IVVPTRELVKQAREA-CELCAAG-SGLRVASAVGNVAIKDEQRSLMRVDQV--------- 367
Query: 121 AVGLSVGLAVGQSSIADE----------ISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
G + + + D+ ++++ R G C + + + VDIL
Sbjct: 368 -YGPEISRQRQHTKMTDQDWTNFNLQEYVADVADR-----GDCL--PGYVHKAEPNVDIL 419
Query: 171 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL--TRSDNENRFS 228
+ TPGRL+DHI T+GFTL+HL +LV+DE DRLL E++Q W+ V+ +R D++
Sbjct: 420 ICTPGRLVDHIRYTKGFTLKHLEWLVIDEADRLLNESFQEWVDVVMTSLDSRKDSD---- 475
Query: 229 DASTFLPSAFGSLKTI-RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
AFGS I G+ K+ PR K++LSAT+T+D KL L L +P
Sbjct: 476 --------AFGSSGQIMADLGLPIQTKE---PR--KVILSATMTRDVTKLNSLRLLNPKL 522
Query: 288 LTTGET 293
+ G +
Sbjct: 523 VLVGSS 528
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
+ S KTL A+R GKI +++++D +RG+D+ +N+VVNYD P + TY+HR GRTAR
Sbjct: 716 NKSSASRKTLTAYRRGKISIIIATDRASRGLDLPSLNHVVNYDVPPSVTTYVHRVGRTAR 775
Query: 423 AGQLGRCFTLLHKDEVKRFKK 443
AG+ G +TL+ E + F K
Sbjct: 776 AGREGSAWTLVAHREGRWFVK 796
>gi|406603762|emb|CCH44787.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 435
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 185/429 (43%), Gaps = 107/429 (24%)
Query: 28 CIN-SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 86
CI + TGSGKT+++ P++ S + LV+ PTR+LALQ
Sbjct: 35 CIGGAKTGSGKTIAFGAPMLTKWSEDPMGIF-GLVLTPTRELALQ--------------- 78
Query: 87 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 146
IAE FAA+ A+ + + + VG S+ ++ +L +P
Sbjct: 79 ------IAEQ------------------FAALGAAMNIRIAVIVGGESMVEQAIKLQGKP 114
Query: 147 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC---YLVVDETDRL 203
++ATPGRL DHI + T+E L YLV+DE DRL
Sbjct: 115 HF---------------------VIATPGRLADHILNSGEDTIEGLKRVRYLVLDEADRL 153
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS---LKTIRRCGVERGFKDKPYPR 260
L ++ SD + FS LPSA L T R KD+P P
Sbjct: 154 LSNSFG-----------SDLQRCFS----ILPSADKRQTLLFTATVTDAVRALKDRPTP- 197
Query: 261 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVAL 320
T P +L +H + +P +LE+Y ++ S +K YL ++
Sbjct: 198 ----------TNKP----KLFIHE----VDSVDKVAIPSQLETYFMLVPSYVKESYLYSI 239
Query: 321 LQSLGEEK--CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREG 378
L EK +VF V TH + L I++ Q R+ +L FR
Sbjct: 240 LSHEDNEKKTAMVF---VNRTHTAEVVRRTLRNLEIRVASLHSELPQQERTNSLHRFRAN 296
Query: 379 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 438
+VL+++D +RG+D+ V V+NYD PA ++HR GRTARAG+ G+ +L+ + +V
Sbjct: 297 AARVLIATDVASRGLDIPDVELVINYDIPADPDDFVHRVGRTARAGRKGQTISLVSEKDV 356
Query: 439 KRFKKLLQK 447
R + + ++
Sbjct: 357 SRIQAIEER 365
>gi|330445855|ref|ZP_08309507.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490046|dbj|GAA04004.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 455
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 190/439 (43%), Gaps = 104/439 (23%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MG +S P+Q ++ I L ++L + TG+GKT S+ LPI+Q L + +
Sbjct: 19 MGYTSPTPIQ----EKAIPVALTGKNLMAAAQTGTGKTASFVLPILQMLDD-------GI 67
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V P R AL + R E+ VQ V+D +
Sbjct: 68 KVRPKRVRALILAPTR------------------ELAVQ-----------VEDNIKQYSK 98
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+ L S+A + G+ Y+P+ + L VDILVATPGRL+D
Sbjct: 99 HLNLK--------SMA-----------MYGGVDYEPQK--RRLIEGVDILVATPGRLLD- 136
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+ R + + LV+DE DR+L + D +
Sbjct: 137 MYTQRAIHFDAIEILVLDEADRMLDMGF------------------IEDIN--------- 169
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 300
K + R V+R M+ SATL+ LA+ + +P+ ++ + P +
Sbjct: 170 -KIVERLPVDRQ----------NMLFSATLSDQVRFLAKTAVRNPIEISVAKNASADP-K 217
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
++ + + + +K L L+Q E+ ++F +E+ H L+ + IK + +
Sbjct: 218 IDQWLVTVDKDMKSSLLSHLIQEQQWEQALIF---IETKHGAAKLVTQLEKRGIKAESFH 274
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
+ Q VRS+ L+ F+ GK+Q L+++ +RG+D+E + VVNYD P + Y+HR GRT
Sbjct: 275 SGRSQGVRSQLLEDFKNGKLQYLIATGVASRGIDIEQLTRVVNYDLPFPPEEYVHRIGRT 334
Query: 421 ARAGQLGRCFTLLHKDEVK 439
RAG G + + KD K
Sbjct: 335 GRAGASGEAISFVSKDNFK 353
>gi|312070907|ref|XP_003138363.1| hypothetical protein LOAG_02778 [Loa loa]
Length = 463
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 48/315 (15%)
Query: 163 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 222
L+ DI++ATPGRL+DH++ F+L ++ LV+DE DR+L EA+ + ++ L
Sbjct: 38 LRQRPDIVIATPGRLIDHLHNAPNFSLVNVEILVLDEADRMLDEAFADQMKEIIHL---- 93
Query: 223 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 282
C R M+ SAT+T +LA + L
Sbjct: 94 ------------------------CAQNRQ----------TMLFSATMTDQVEELAAVSL 119
Query: 283 HHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIVFTSSVESTH 340
+P+ L TG T L R E ++ + +VA L + + I+F + +
Sbjct: 120 KNPVKLFITGNTETALNLRQEFVRIRESHETDRECIVAGLVTRNFPDHTIIFVKTKRTCR 179
Query: 341 RLCTLLNHFGELRIKIKE-YSGL-QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
RL +L G +K+ + +SGL QRQ V + L F++ ++ VLVS+D RG+DVEGV
Sbjct: 180 RLHIVLGLLG---VKVGQLHSGLTQRQRV--EALFRFKKAELDVLVSTDLAARGLDVEGV 234
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS- 457
V+N D P+ +K Y+HR GRTARAG++GR +L+ + E K K+++ C
Sbjct: 235 KTVINMDMPSTLKQYVHRVGRTARAGRVGRSISLVGESERKILKEIIASNKGGGCLKQRL 294
Query: 458 IPSSLIESLRPVYKS 472
I ++++E+ + +S
Sbjct: 295 ISANVVEAYKNRIES 309
>gi|389612037|dbj|BAM19549.1| Dead box protein 73D, partial [Papilio xuthus]
Length = 248
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 294 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
+Y P+ L ++C ++ KPL L LL +K + FT+S +S HRL LLN +G+ +
Sbjct: 31 KYTTPDELIENYVVCNAEEKPLILFHLLVEKKWDKVLCFTNSAQSVHRLAVLLNEWGKDQ 90
Query: 354 -IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
+K+ E S ++ R K L+ F++ ++ V++S+DA+ RG+D+ N VV+YD P IKT
Sbjct: 91 CLKVAELSSALDRASREKVLEKFKQSEVNVIISTDALARGIDIPDCNYVVSYDPPRNIKT 150
Query: 413 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
Y+HR GRT RAG++GR T+L+ +++ FK+ +Q +
Sbjct: 151 YVHRVGRTGRAGRIGRAVTILNHNQLNMFKEQIQSS 186
>gi|146100408|ref|XP_001468856.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania infantum
JPCM5]
gi|134073225|emb|CAM71946.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania infantum
JPCM5]
Length = 405
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 182/444 (40%), Gaps = 106/444 (23%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 72
V +E I L +D+ + G+GKT S+ +P+++ + R ++AL+++PTR+LALQ
Sbjct: 56 VQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRE-SYVQALLMVPTRELALQT 114
Query: 73 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 132
QV P GL V + G
Sbjct: 115 ------------------------------------AQVTKELGKHIP--GLEVMVTTGG 136
Query: 133 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 192
+++ D+I L S V ILVATPGR++D + + + L H
Sbjct: 137 TTLRDDILRLT---------------------SKVHILVATPGRVLD-LASKKAVDLSHC 174
Query: 193 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 252
LV+DE D+LL + + + D T+LPS S
Sbjct: 175 HILVLDEADKLLSQEFMEII---------------DDLYTYLPSQLQS------------ 207
Query: 253 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-TGETRYKLPERLESYKLICESK 311
M+ SAT A+ LH+P + E K + Y E +
Sbjct: 208 -----------MLFSATFPVTVKTFAERHLHNPYEINLMDELTLK---GVTQYYAFVEER 253
Query: 312 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 371
K L L L + I+F +SV L + G I ++ +Q+Q R++
Sbjct: 254 QKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYI--HARMQQQH-RNRV 310
Query: 372 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 431
FREG + LV SD +TRG+D++ VN V+N+D P Y +TY+HR GR+ R G LG
Sbjct: 311 FHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYSETYLHRIGRSGRFGHLGVAIN 370
Query: 432 LLHKDEVKRFKKLLQKADNDSCPI 455
+ D+ ++ Q+ D + PI
Sbjct: 371 FVTYDDRYNVYRIEQELDTEIKPI 394
>gi|413934953|gb|AFW69504.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 434
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 146/314 (46%), Gaps = 54/314 (17%)
Query: 160 LQELQSAVDI---LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 216
+ L SA+ + +V TPGRL+DH+ T+GF+L+ + YLV+DE D+LL ++ L +L
Sbjct: 115 FEALGSAIGLRCSVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDIL 174
Query: 217 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 276
D TFL SAT+T+ NK
Sbjct: 175 SEMPKDRR-------TFL-------------------------------FSATMTKKVNK 196
Query: 277 LAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 336
L + L +P + ++Y + L+ + K YL+ +L E ++F +
Sbjct: 197 LQRACLRNPAKVEVS-SKYSTVDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTC 255
Query: 337 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 396
EST L +L + G +K SG Q R L F+ +L+ +D +RG+D++
Sbjct: 256 ESTRLLALMLRNLG---LKAMSISGQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQ 312
Query: 397 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF--------KKLLQ-K 447
GV+ V+NYD P K Y+HR GRTARAG+ G +L+++ E + F KK+ Q K
Sbjct: 313 GVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCK 372
Query: 448 ADNDSCPIHSIPSS 461
D D I P S
Sbjct: 373 VDRDEVLILKGPIS 386
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT-LSNR-AVRCLRALVVLPTRDLAL 70
+ E I L +DL + TGSGKT ++ALPI+Q LSNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 71 QV 72
Q+
Sbjct: 110 QI 111
>gi|440803376|gb|ELR24282.1| DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative,
partial [Acanthamoeba castellanii str. Neff]
Length = 261
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 42/278 (15%)
Query: 169 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 228
I+ ATPGRL+ H+ T+GF+L+ L YLV+DE DRLL Y+ + +L
Sbjct: 8 IICATPGRLLFHLQNTKGFSLKSLKYLVLDEADRLLNMDYEEEIDQILAC---------- 57
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 288
LP ER + SAT+T KL + L +P+ +
Sbjct: 58 -----LPK-------------ERH----------TYLFSATMTSKVKKLERASLANPVKI 89
Query: 289 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 348
+ + L++Y + E K K YLV LL IVF ++ + R+ +L +
Sbjct: 90 SVSSKYSTVDTLLQNYVFVPE-KFKDCYLVYLLNEFVGNSIIVFVATCNTAQRVALMLRN 148
Query: 349 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 408
G + I G QS R +L F+ G +L+++D +RG+D+ V+ ++NYD P
Sbjct: 149 LGFEALPIH---GKMSQSRRIGSLNTFKTGDRNILLATDVASRGLDIPSVDLIINYDIPL 205
Query: 409 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 446
K YIHR GRTARA + GR +++ + +++ F+K+ Q
Sbjct: 206 NPKDYIHRVGRTARAQRAGRAVSVVTQYDIEFFQKIEQ 243
>gi|348672465|gb|EGZ12285.1| hypothetical protein PHYSODRAFT_361512 [Phytophthora sojae]
Length = 836
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 198/469 (42%), Gaps = 107/469 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ--------TLSNR 52
+G P+Q+ + I GL +RD+ + TGSGKT ++ +PI+ ++
Sbjct: 389 LGFERPSPIQM----QAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPPAMVART 444
Query: 53 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
+ ALV+ PTR+LALQ+ K C + S+ Q +
Sbjct: 445 GEQGPLALVMAPTRELALQIEQEAIKLCK-----------------------YTSVGQPE 481
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+ P LSV VG SI D+ G L+ VDI++
Sbjct: 482 ----KLGPIKTLSV---VGGQSIEDQ------------GF---------RLREGVDIIIG 513
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ----LTRSDNENRFS 228
TPGRLMD + + L Y+V+DE DR++ ++ + VL+ L +S+NE
Sbjct: 514 TPGRLMDCLE-SHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEME 572
Query: 229 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--- 285
T A + R V + SAT+ + +LA+ L HP
Sbjct: 573 QQLTLANGAQPGEELQHRL-------------RVTTMFSATMPVEVERLAKTFLRHPSIV 619
Query: 286 -----------------LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 328
LF+ G+ R KL +E + I ++ PL + + K
Sbjct: 620 KIGDEDSGKNKRIDQRVLFMNPGKKRSKL---VEVLRDILSAQSVPLPRSRKEKVVDGAK 676
Query: 329 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
IVF + + + ++ G R I G + Q R ++LK FREG +LV++D
Sbjct: 677 IIVFVNIKKECDSVAKFISSEG-FRCTI--LHGGKTQDQREESLKMFREGYCDMLVATDV 733
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
RG+D+ V +VVN+D P+ I+ Y HR GRT RAG+ G + L D+
Sbjct: 734 AGRGLDIPDVTHVVNFDLPSKIQNYTHRIGRTGRAGKDGVAISFLTDDD 782
>gi|301112795|ref|XP_002998168.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262112462|gb|EEY70514.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 823
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 197/467 (42%), Gaps = 104/467 (22%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLR- 58
+G P+Q+ + I GL +RD+ + TGSGKT ++ +PI+ + S A R
Sbjct: 377 LGFERPSPIQM----QAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPATMVART 432
Query: 59 ------ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 112
ALV+ PTR+LALQ+ K C GL P+
Sbjct: 433 GEQGPLALVMAPTRELALQIEQEAIKLCKHTSVGL---------------------PE-- 469
Query: 113 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 172
+ P LSV VG SI D+ G L+ V+I++
Sbjct: 470 ----KMNPIKTLSV---VGGQSIEDQ------------GF---------RLREGVEIIIG 501
Query: 173 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ----LTRSDNENRFS 228
TPGRLMD + + L Y+V+DE DR++ ++ + VL+ L +S+NE
Sbjct: 502 TPGRLMDCLE-SHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEME 560
Query: 229 DASTFLPSA-FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
T A G + R V + SAT+ + +LA+ L HP
Sbjct: 561 QQLTLANRAQLGEFQHRLR---------------VTTMFSATMPVEVERLAKTFLRHPSI 605
Query: 288 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL-----------------GEEKCI 330
+ G+ +R+E + K LV +L+ + K I
Sbjct: 606 VKIGDEDSGKNKRIEQRVMFMNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKII 665
Query: 331 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 390
VF + + + ++ G R I G + Q R ++LK FREG +LV++D
Sbjct: 666 VFVNIKKECDSVAKFISSEG-FRCTI--LHGGKTQDQREESLKMFREGYCDMLVATDVAG 722
Query: 391 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
RG+D+ V +VVN+D P+ I+ Y HR GRT RAG+ G +LL D+
Sbjct: 723 RGLDIPDVTHVVNFDLPSKIQNYSHRIGRTGRAGKDGVAISLLTDDD 769
>gi|451979881|ref|ZP_21928289.1| ATP-dependent RNA helicase rhlE [Nitrospina gracilis 3/211]
gi|451762901|emb|CCQ89503.1| ATP-dependent RNA helicase rhlE [Nitrospina gracilis 3/211]
Length = 436
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 197/471 (41%), Gaps = 126/471 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV----RCLRALVVLPTRDL 68
+ E+I L RDL + TG+GKT ++ALP++Q L+ + RAL++ PTR+L
Sbjct: 37 IQSESIPHLLQGRDLLGCAQTGTGKTAAFALPLLQRLAESNTVPGPKGARALILAPTREL 96
Query: 69 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 128
A+ Q+++ F + LS L
Sbjct: 97 AV---------------------------------------QIEESFRVYGRHLKLSRAL 117
Query: 129 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 188
G +I + L+ VD+LVATPGRL+D + R
Sbjct: 118 VYGGVKTFHQI---------------------RALKRGVDVLVATPGRLLD-LMEQRALR 155
Query: 189 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 248
L+ + V+DE DR+L +LP V ++ + + R +
Sbjct: 156 LDKVEIFVLDEADRML---DMGFLPDVRRIHSALPQKRQT-------------------- 192
Query: 249 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGETRYKLPERLE 302
M+ SATL Q+ +L LH P+ + TTG+ +
Sbjct: 193 ---------------MLFSATLPQEVRRLISTFLHDPVHVSVSPPSTTGKN-------IA 230
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
L + + K L +LL E+ +VFT + +++ LN + RI+ + G
Sbjct: 231 QKILFVDKENKKALLESLLGDAQIERVLVFTRTKHGANQVAKRLN---QTRIRAEAIHGN 287
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
+ Q R + L+ FR GK +VLV++D + RG+DV+G+ +V+NY+ P ++Y+HR GRTAR
Sbjct: 288 KSQPARLQALEKFRSGKTRVLVATDIVARGLDVDGITHVINYELPKEAESYVHRIGRTAR 347
Query: 423 AGQLGRCFTLLHKDE------VKRFKKLLQKADNDSCPIHSIPSSLIESLR 467
AG G + E ++R K D D P HS + ++ R
Sbjct: 348 AGATGIALSFCDAGERPYLSRIEREIKSTVDVDTDH-PYHSASVAALKGAR 397
>gi|391229094|ref|ZP_10265300.1| DNA/RNA helicase, superfamily II [Opitutaceae bacterium TAV1]
gi|391218755|gb|EIP97175.1| DNA/RNA helicase, superfamily II [Opitutaceae bacterium TAV1]
Length = 539
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 191/443 (43%), Gaps = 117/443 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
MG + P+Q P + E RD+ ++ TG+GKT ++ALP++ L LR
Sbjct: 152 MGYTEPTPIQAQAV-----PLVLEGRDVTGSAQTGTGKTAAFALPVLHRLGAHG--RLRC 204
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV+ PTR+LAL QV++ F +
Sbjct: 205 LVLEPTRELAL---------------------------------------QVEEAFQKYS 225
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L+ + G G+ Y + ++LQ VD+L ATPGRL+D
Sbjct: 226 KYTDLTTTIVYG-------------------GVGYGKQ--REDLQRGVDVLAATPGRLLD 264
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ TL+ + L++DE DR+L +LP V ++
Sbjct: 265 HLEQGT-LTLDSIEILILDEVDRMLD---MGFLPDVKRI--------------------- 299
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD---LHHPLFLTTGETRYK 296
+++C ER + SATL P +LAQL L P+ + G+ R
Sbjct: 300 ----VQQCPRER----------QTLFFSATL---PPELAQLSSWALRDPVQIKIGQRRSP 342
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + S+ L L+ LL+ + I+FT + R+ L + + +
Sbjct: 343 AETVSHAFYPVVASQKFDL-LIELLKRTEFKSIIIFTRTKMGADRIAHRLQR-EQHTVGV 400
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
QR+ V + L+ F+ GK +VLV++D RG+D+ GV++V+NYD P + Y+HR
Sbjct: 401 IHSDRSQRERV--EALEGFKSGKFEVLVATDIAARGLDIAGVSHVINYDVPENAEDYVHR 458
Query: 417 AGRTARAGQLGRCFTLLHKDEVK 439
GRT RA G FTL+ +D+V+
Sbjct: 459 IGRTGRANATGDAFTLVTEDDVR 481
>gi|257054731|ref|YP_003132563.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
gi|256584603|gb|ACU95736.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
Length = 559
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 45/288 (15%)
Query: 157 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 216
E +Q L+S VD+++ TPGRL+D + R L + LV+DE D +L + LP +
Sbjct: 133 ESQIQSLRSGVDVVIGTPGRLLD-LAEQRNLVLGKISTLVLDEADEMLDLGF---LPDIE 188
Query: 217 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 276
++ R E+R + M+ SAT+
Sbjct: 189 RILRMVPEDRQT-----------------------------------MLFSATMPGPILT 213
Query: 277 LAQLDLHHPLFL--TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 334
LA+ L P + GET + ER + S KP + +LQ+ G ++FT
Sbjct: 214 LARTFLRQPTHIRAEAGET-GAIHERTTQFVYRAHSLDKPELIAKVLQAEGRGLTMIFTR 272
Query: 335 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 394
+ + ++ L G G Q R + L+AFR GK+ +LV++D RG+D
Sbjct: 273 TKRTAQKVADDLVERG---FAAAAVHGDLGQGAREQALRAFRSGKVDILVATDVAARGID 329
Query: 395 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 442
VEGV +V+NY P KTY+HR GRT RAG+ G TL+ DEV R+K
Sbjct: 330 VEGVTHVINYQMPEDEKTYVHRIGRTGRAGRTGVAITLVDWDEVPRWK 377
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI F +Q T+ L D+ + TG+GKTL + +P++Q L +ALV
Sbjct: 42 GIERTFDIQAL----TLPLALRGEDVIGQARTGTGKTLGFGVPLLQRLVTPGDGTPQALV 97
Query: 62 VLPTRDLALQVN 73
V+PTR+L LQV+
Sbjct: 98 VVPTRELCLQVS 109
>gi|226229150|ref|YP_002763256.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
gi|226092341|dbj|BAH40786.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
Length = 498
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 147/312 (47%), Gaps = 49/312 (15%)
Query: 150 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
G+ P++ +S VD++VATPGRL+DH L+ L YLV+DE DR+L
Sbjct: 108 GGVGMGPQE--HAFRSGVDVIVATPGRLLDHFRQPYA-KLDQLEYLVLDEADRMLD---M 161
Query: 210 AWLPTVLQLTRS-DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 268
+LP + ++ R N R T SA P P A
Sbjct: 162 GFLPEIKKILRHLPNRKR----QTLFFSA-----------------TMPPP-------IA 193
Query: 269 TLTQDP-NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
LTQ+ NK L+L G T+ P +LK LVALL+
Sbjct: 194 ALTQEMLNKPVTLNLQRQAAPAKGITQAVYP---------VSQELKSALLVALLKRGDMP 244
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
+ +VFT + +RL + L G IK + G + QS R++ L F++G QVLV++D
Sbjct: 245 QALVFTRTKHRANRLASQLVTAG---IKAERIHGNRSQSQRTQALAGFKDGSYQVLVATD 301
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
RG+DVE + +VVN+D P + YIHR GRTARA G FT + +E KL+++
Sbjct: 302 IAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGEL-KLIER 360
Query: 448 ADNDSCPIHSIP 459
A + P ++P
Sbjct: 361 AIKRALPRVTVP 372
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q E I P L RD+ + TGSGKT ++ LPI+ L ++ RAL
Sbjct: 21 LGFARPTPIQ----GEAIPPALEGRDVLACAMTGSGKTYAFLLPILHQLMSKPRGNTRAL 76
Query: 61 VVLPTRDLALQV 72
V+ PTR+LA Q+
Sbjct: 77 VLTPTRELAAQI 88
>gi|373853830|ref|ZP_09596629.1| DEAD/DEAH box helicase domain protein [Opitutaceae bacterium TAV5]
gi|372473357|gb|EHP33368.1| DEAD/DEAH box helicase domain protein [Opitutaceae bacterium TAV5]
Length = 539
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 191/443 (43%), Gaps = 117/443 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 59
MG + P+Q P + E RD+ ++ TG+GKT ++ALP++ L LR
Sbjct: 152 MGYTDPTPIQAQAV-----PLVLEGRDVTGSAQTGTGKTAAFALPVLHRLGAHG--RLRC 204
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV+ PTR+LAL QV++ F +
Sbjct: 205 LVLEPTRELAL---------------------------------------QVEEAFQKYS 225
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
L+ + G G+ Y + ++LQ VD+L ATPGRL+D
Sbjct: 226 KYTDLTTTIVYG-------------------GVGYGKQ--REDLQRGVDVLAATPGRLLD 264
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
H+ TL+ + L++DE DR+L +LP V ++
Sbjct: 265 HLEQGT-LTLDSIEILILDEVDRMLD---MGFLPDVKRI--------------------- 299
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD---LHHPLFLTTGETRYK 296
+++C ER + SATL P +LAQL L P+ + G+ R
Sbjct: 300 ----VQQCPRER----------QTLFFSATL---PPELAQLSSWALRDPVQIKIGQRRSP 342
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
++ + S+ L L+ LL+ + I+FT + R+ L + + +
Sbjct: 343 AETVSHAFYPVVASQKFDL-LIELLKRTEFKSIIIFTRTKMGADRIAHRLQR-EQHTVGV 400
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
QR+ V + L+ F+ GK +VLV++D RG+D+ GV++V+NYD P + Y+HR
Sbjct: 401 IHSDRSQRERV--EALEGFKSGKFEVLVATDIAARGLDIAGVSHVINYDVPENAEDYVHR 458
Query: 417 AGRTARAGQLGRCFTLLHKDEVK 439
GRT RA G FTL+ +D+V+
Sbjct: 459 IGRTGRANATGDAFTLVTEDDVR 481
>gi|403720926|ref|ZP_10944236.1| putative ATP-dependent RNA helicase [Gordonia rhizosphera NBRC
16068]
gi|403207467|dbj|GAB88567.1| putative ATP-dependent RNA helicase [Gordonia rhizosphera NBRC
16068]
Length = 529
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 174/426 (40%), Gaps = 102/426 (23%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTL---SNRAVRCL----RALVVLPTRDLALQVNSARCK 78
DL + TG GKT + +P++ L +R L RALV++PTR
Sbjct: 52 DLIGQARTGMGKTFGFGVPLLHRLVHAEESGLRALDNTPRALVIVPTR------------ 99
Query: 79 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 138
E+C+Q L ++ ++ FA D
Sbjct: 100 ----------------ELCLQVTGDLEVAARRLDVTFA--------------------DR 123
Query: 139 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVV 197
+ +K + G Y E + EL+S VD++V TPGRL+D A +G L + LV+
Sbjct: 124 ATRPLKITSIYGGRPY--ESQIAELKSGVDVVVGTPGRLLDL--AQQGHLILGKVAILVL 179
Query: 198 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 257
DE D +L FLP +ER P
Sbjct: 180 DEADEMLDLG-------------------------FLPD------------IERIMASLP 202
Query: 258 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-YKLPERLESYKLICESKLKPLY 316
PR M+ SAT+ LA+ LH P + + ER + + K
Sbjct: 203 TPRQT-MLFSATMPGPIVTLARTFLHRPTHIRAEHANDSAVHERTTQHVYRAHALDKAEL 261
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 376
+ +LQ+ G ++FT + + ++ + GE + G Q R K LK FR
Sbjct: 262 VARILQADGRGATMIFTRTKRTAQKVA---DDLGERGFSVGAVHGDLGQVAREKALKRFR 318
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
G I VLV++D RG+D++ V +V+NY P KTYIHR GRT RAG+ G TL+ D
Sbjct: 319 NGDIDVLVATDVAARGIDIDDVTHVINYQCPDDDKTYIHRIGRTGRAGRTGTAITLVDWD 378
Query: 437 EVKRFK 442
E+ R++
Sbjct: 379 ELHRWE 384
>gi|403350666|gb|EJY74800.1| DEAD/DEAH box helicase family protein [Oxytricha trifallax]
Length = 795
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 189/451 (41%), Gaps = 104/451 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLR 58
GIS LFPVQ + + +DL + TGSGKTL +ALP V+ L R ++
Sbjct: 120 GISGLFPVQYSSFNHIWN----RKDLIVRDLTGSGKTLGFALPTVEYLRKNKLFGTRKIQ 175
Query: 59 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 118
A+V+ PTR E+ +Q S F +L + + +
Sbjct: 176 AMVLAPTR----------------------------ELALQV-SKEFNALKHFEGEYNVL 206
Query: 119 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 178
G+S+ +D +L+ VDI V T GR+M
Sbjct: 207 TVYGGVSI------------------------------DDQTYQLRKGVDIFVGTTGRVM 236
Query: 179 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
DH+ R F L L++DETD++L++ ++ + ++Q
Sbjct: 237 DHM-ERRNFDFTDLKTLILDETDQMLKQGFKEDVERIMQ--------------------- 274
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
++K R G++ P VK V + D +DL L T +T
Sbjct: 275 -TIKAARPNGMQVLLFSATIPFWVKQVAKEQMAPD---FQMVDLAQNLKNKTSKT----- 325
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
+ + C + + L +L G + IVF S+ + L LL+ +++ I+
Sbjct: 326 --VNHLSINCPYQNRMSALADILICYGGLGQTIVFCSTKAEANSL--LLSD--KIKQDIE 379
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
G Q+ R TLK F+E K VLV++D +RG+D+ V+ V+ + P +++YIHRA
Sbjct: 380 VMHGDIAQNQREVTLKRFKENKFSVLVATDVASRGLDIPNVDLVIQVEPPNDVESYIHRA 439
Query: 418 GRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
GRTARAG+ G C T K + QKA
Sbjct: 440 GRTARAGRTGTCITFYGKKHQYMINMIEQKA 470
>gi|12845167|dbj|BAB26644.1| unnamed protein product [Mus musculus]
Length = 165
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
+ + FT+S E++HRL L FG + + E+S R K LK F +GKIQ+L+S+D
Sbjct: 5 RALCFTNSRENSHRLYLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTD 62
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
A RG+DV+GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +
Sbjct: 63 ATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSE 122
Query: 448 ADNDSCPIHSIPSSLIESLRPVYKSG 473
A H IP L++ L Y++
Sbjct: 123 AGVPELTHHEIPRKLLQPLVARYETA 148
>gi|321460070|gb|EFX71116.1| hypothetical protein DAPPUDRAFT_309224 [Daphnia pulex]
Length = 757
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 185/444 (41%), Gaps = 105/444 (23%)
Query: 22 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC--LRALVVLPTRDLALQVNSARCKY 79
L ++D + S TGSGKTL+YA+PIV++++ + R + ALV++PTR
Sbjct: 222 LDKKDALVKSQTGSGKTLAYAIPIVESITPKIDRTSGVFALVIVPTR------------- 268
Query: 80 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 139
E+ +Q + ++ F + P G +G E
Sbjct: 269 ---------------ELVLQ----TYTWFTKILKAFTWVVP------GYLIGGEKKKSEK 303
Query: 140 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 199
+ + K ++IL++TPGRL+DH+++TR L L +LV+DE
Sbjct: 304 ARIRK---------------------GMNILISTPGRLLDHLSSTRNLNLGRLHWLVMDE 342
Query: 200 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 259
DRLL Y+ + +L + + E K+
Sbjct: 343 ADRLLDMGYEKDVARILSIVQ-----------------------------EHFVKEGCIG 373
Query: 260 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK------LPERLESYKLICESKLK 313
R +++SATL++ KLA L L P ++ E + P L+ + +I KL+
Sbjct: 374 RRQNVMVSATLSKGVEKLAGLTLTDPEYIKLSEDDSENQDQLVTPTNLKQWYIIVPPKLR 433
Query: 314 PLYLVALL----QSLGEEKCIVFTSSVESTHRLCTLLNHF---GELRIKIKEYS--GLQR 364
L A + E+K ++F ++ +S L N E R I Y G
Sbjct: 434 LATLAAFILWKCTISTEKKVLIFMTTQDSVDYHAELFNRVLAKREDRTSISFYKLHGSMP 493
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R+ K FR+ VL+ +D RG+D+ ++ +V Y+ P + Y+HR GRTAR G
Sbjct: 494 QKDRTAIFKEFRDTDSGVLLCTDVAARGLDLSAIDWIVQYNPPVTAEEYVHRVGRTARVG 553
Query: 425 QLGRCFTLLHKDEVKRFKKLLQKA 448
+ G+ L E +L +
Sbjct: 554 KCGQAIIFLAPPETDFVHRLANRG 577
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 173/420 (41%), Gaps = 108/420 (25%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+D+ + TGSGKT ++ALPI+Q L ALV+ PTR+LA Q++
Sbjct: 40 KDVLGMAQTGSGKTAAFALPILQRLGENPYGIF-ALVMTPTRELAFQIS----------- 87
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
D F A+ V L + VG + + L +
Sbjct: 88 ----------------------------DQFKALGAGVHLRCAVVVGGMDMTTQAQILTE 119
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT--LEHLCYLVVDETDR 202
RP +++ATPGR+ H+ + +LV+DE D
Sbjct: 120 RPH---------------------VVIATPGRIKAHLGSDPDIAAAFSKTKFLVLDEADL 158
Query: 203 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 262
LL +Q L T+ F + R+
Sbjct: 159 LLDRGFQDELQTI----------------------FDGISKQRQT--------------- 181
Query: 263 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 322
++ SAT+T D L L H F E K E L+ + K+K +YL LL+
Sbjct: 182 -LLFSATMTGDLQALRDLFGHRAFFYQAYEG-LKTVESLDQRYIFMPGKVKNVYLTYLLE 239
Query: 323 SL--GE-EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
+L G+ I+F S + H L +L+ EL I ++ Q R L F+ G+
Sbjct: 240 NLELGDIRSVIIFVSRCRTCHLLSLILD---ELGISAVALHSVKTQPQRLAALNQFKSGQ 296
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
+L+++D +RG+D+ V+ VVNYD P + K Y+HR GRTARAG+ GR +L+ + +V+
Sbjct: 297 ATILIATDVASRGLDIPTVDLVVNYDIPRFTKDYVHRVGRTARAGRGGRAISLVTELDVE 356
>gi|306821248|ref|ZP_07454862.1| ATP-dependent RNA helicase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550760|gb|EFM38737.1| ATP-dependent RNA helicase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 517
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 187/427 (43%), Gaps = 107/427 (25%)
Query: 15 QETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 73
QE I P + D+ S TG+GKT+++ +P++Q L + ++++++ PTR+LA+QV
Sbjct: 29 QEKIVPVAVNKCDVIGQSQTGTGKTVAFGIPLIQNLDFDEEK-IQSVIMTPTRELAIQVT 87
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
AE+ + L LP AV L G
Sbjct: 88 --------------------AEI-----NRLLRFLP---------TKAVALYGG------ 107
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+EI+ IKR L+ I+VATPGRLMDHI R E++
Sbjct: 108 ---EEITRQIKR-----------------LKDRPAIIVATPGRLMDHIRR-RTVKTEYIN 146
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
+V+DE D +L + + +L+ +P+
Sbjct: 147 TVVLDEADEMLSMGFVEDIEEILEQ---------------MPN----------------- 174
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
R + M+ SAT+ K+++ L PLF+ + + Y I ES K
Sbjct: 175 ------RSITMLFSATMPDRIKKISEKFLKDPLFVKVERKTLTVDSIDQKYIQIQESD-K 227
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-IKIKEYSGLQRQSVRSKTL 372
L LL CI+F + L + L +LR K++ G +Q R K L
Sbjct: 228 FDALCRLLDIYQPPLCIIFGRTKRRVDELISGL----QLRDYKVEGIHGDMKQDRREKVL 283
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
+ F++G I++LV++D RG+D+ GV +V+N+D P I+ Y+HR GRT RAG+ G FT
Sbjct: 284 ERFKKGNIRILVATDVAARGLDISGVTHVINFDLPQEIEGYVHRIGRTGRAGKSGVSFTF 343
Query: 433 LHKDEVK 439
+H E++
Sbjct: 344 VHPKEME 350
>gi|156086188|ref|XP_001610503.1| DEAD/DEAH box helicase family protein [Babesia bovis T2Bo]
gi|154797756|gb|EDO06935.1| DEAD/DEAH box helicase family protein [Babesia bovis]
Length = 497
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 192/467 (41%), Gaps = 118/467 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVR 55
GI+ LFPVQ V I + +R D+ I +PTG G R
Sbjct: 54 GITDLFPVQKQVIPWLINCDVLDRFSSSACDIVITAPTGQG------------------R 95
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
L AL++ PTR+L Q + C F L V+
Sbjct: 96 GLCALILAPTRELVKQT---------------------YDFCTWF-------LEDDASVY 127
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
+ L L G +S D+ + L L+ + I++ TPG
Sbjct: 128 D-LKGGTLLRAHLCYGSTSFVDDHTYL--------------------LEHSPQIVLFTPG 166
Query: 176 RLMDHIN---ATRGFTLEH--LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 230
R ++H N ++ G L++ + ++V+DE D LL ++Y W V ++R E +
Sbjct: 167 RFVEHYNHRNSSCGKILDYSSIRWMVIDEVDMLLSQSYFNWTSVVTSISRECQEKQ---- 222
Query: 231 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL---HHPLF 287
+ L ++F P R K+++SAT+ P K A++DL + PL
Sbjct: 223 -SLLDTSF------------------PVVRPQKILVSATI---PTKSAEIDLIQLNRPLL 260
Query: 288 LTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLGE-----EKCIVFTSSVESTHR 341
+ + + Y LP L + + KPL L LL + +K IVF S ++ H
Sbjct: 261 MKSRSQALYSLPANLTQWYIKTTKNNKPLVLAKLLLHIMANGSTGDKTIVFCSYRQTAHA 320
Query: 342 LCTLLN----HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 397
+ +L H G ++ E S Q R + FR+G LV SD +RGM+
Sbjct: 321 MVRMLELFSIHTGH-NLRSLELSASLSQKQRHDVVDMFRKGDSFCLVCSDVASRGMNFSN 379
Query: 398 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
NV+NYD P I YIHR GRTARA + G + LL +V F+K
Sbjct: 380 TRNVINYDFPTSIAKYIHRIGRTARAYESGNSYILLTGQQVVGFQKF 426
>gi|392570219|gb|EIW63392.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 956
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 185/428 (43%), Gaps = 85/428 (19%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL--RALVVLPTRDLALQVNSARCKYCCK 82
RDL + TGSGK+L+Y +P+VQ L R RAL++LP R+LALQ+ K +
Sbjct: 142 RDLVGMARTGSGKSLAYMVPLVQRLGGRHSGTFGARALILLPARELALQILKV-GKELAR 200
Query: 83 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 142
DH+ + KD L GL VG S+ DE E+
Sbjct: 201 GWHAGEGDHA----------------GEHKDTEDG-KKGQSLRWGLVVGGESL-DEQFEM 242
Query: 143 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 202
I S D+++ATPGRL+ H+ L+ + Y+V DE DR
Sbjct: 243 I--------------------SSNPDVIIATPGRLL-HLIVEMNLDLKSIEYVVFDEADR 281
Query: 203 LLREAYQAWLPTVLQ---LTRSDNENRFSDASTFLPSAF--GSLKTIRRCGVERGFKDKP 257
L +Q L +L LTR T L SA SL + G++
Sbjct: 282 LFEMGFQTALSEILHRLPLTRQ----------TLLFSATLPKSLVEFAKAGLQN------ 325
Query: 258 YPRLVKMVLSATLTQDPN------KLAQLD------LHHPLFLTTGETRYKLPERLESYK 305
P+LV++ ++ D K A+ D L + + G T ++ E E K
Sbjct: 326 -PKLVRLDAETKISSDLRMAFFSVKQAEKDACLLVLLRDVIGVPYGSTVPEVDEASEHRK 384
Query: 306 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 365
++K + +A Q+L VF ++ L LL+ G + G Q
Sbjct: 385 GKGKAKKYSEHAIAPHQTL------VFAATKHHVEYLTNLLSTAG---YAVSHIYGTLDQ 435
Query: 366 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 425
+ RS+ + FR G+ +LV +D RG+D+ + NVVNYD P+ + +IHR GRTARAG+
Sbjct: 436 TARSEQMDNFRRGRTSILVVTDVAARGIDIPVLENVVNYDFPSGARVFIHRVGRTARAGR 495
Query: 426 LGRCFTLL 433
G + +
Sbjct: 496 QGWAWNFV 503
>gi|375099094|ref|ZP_09745357.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
gi|374659826|gb|EHR59704.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
Length = 552
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 178/442 (40%), Gaps = 107/442 (24%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
GI F +Q T+ L D+ + TG+GKTL + +P++Q L+ +ALV
Sbjct: 42 GIERTFDIQAL----TLPLALRGEDVIGQARTGTGKTLGFGVPLLQRLTLPGDGTPQALV 97
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
V+PTR E+CVQ L +
Sbjct: 98 VVPTR----------------------------ELCVQVHEDLTKA-------------- 115
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
G +G+ V + G Y E ++ L+ VD+++ TPGRL+D +
Sbjct: 116 -GKHLGVRVA---------------SIYGGRPY--ESQIKSLRDGVDVVIGTPGRLLD-L 156
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
R L + LV+DE D +L FLP
Sbjct: 157 AEQRHLVLGKVSTLVLDEADEMLDLG-------------------------FLPD----- 186
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY-KLPER 300
+ER + P R M+ SAT+ LA+ LH P + + + ER
Sbjct: 187 -------IERVLRMVPDERQT-MLFSATMPGPILTLARTFLHQPTHIRAEDNEAGAVHER 238
Query: 301 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
Y S KP + +LQ+ ++FT + + ++ L G
Sbjct: 239 TTQYAYRSHSLDKPELVAKVLQAEDRGLTMIFTRTKRTAQKVADDLAERG---FAAAAVH 295
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G Q R + L+AFR GK+ VLV++D RG+DV+ V +V+NY P KTY+HR GRT
Sbjct: 296 GDLGQGAREQALRAFRSGKVDVLVATDVAARGIDVDDVTHVINYQTPEDEKTYVHRIGRT 355
Query: 421 ARAGQLGRCFTLLHKDEVKRFK 442
RAG+ G TL+ DE+ R+K
Sbjct: 356 GRAGKTGVAITLVDWDEIPRWK 377
>gi|372271032|ref|ZP_09507080.1| DEAD/DEAH box helicase [Marinobacterium stanieri S30]
Length = 433
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 194/470 (41%), Gaps = 110/470 (23%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
G + P+Q Q+ I L RD+ + TG+GKT + LP+++ LS
Sbjct: 20 GYDTPSPIQ----QQAIPAVLEGRDVMAAAQTGTGKTAGFTLPLLERLSK---------- 65
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
R K + L +A QV D A
Sbjct: 66 ------------GERAKANQARVLILTPTRELAA--------------QVADSVATYGKH 99
Query: 122 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 181
+ L + G G+ +P+ + L+ DIL+ATPGRL+D +
Sbjct: 100 LQLKSAVVFG-------------------GVKINPQ--MMALRKGADILIATPGRLLD-L 137
Query: 182 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 241
++ ++L LV+DE DR+L + + +L+L S +N
Sbjct: 138 HSQNAVRFDNLEALVLDEADRMLDMGFIHDIKRILRLLPSKRQN---------------- 181
Query: 242 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 301
++ SAT ++D +LA+ ++ P+ ++ R E +
Sbjct: 182 ----------------------LLFSATFSKDIRELAKGLVNDPVEVSV-TPRNSTAETV 218
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+ + + K K L+ L++ + +VFT + +RL T L+ + IK G
Sbjct: 219 KQWIAPVDKKRKSPLLIKLIKDNSWYQVLVFTRTKHGANRLATQLD---KANIKAAAIHG 275
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
+ Q R+K L AF+ IQVLV++D RG+D++ + VVN+D P + Y+HR GRT
Sbjct: 276 NKSQGARTKALNAFKTKDIQVLVATDIAARGLDIDLLPQVVNFDLPNVAEDYVHRIGRTG 335
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 471
RAG G+ +L+ DE+ + + + + IP +I+ PV++
Sbjct: 336 RAGADGQAVSLVSADEIDQLRAI------ERLTSKIIPREMIDGFEPVHE 379
>gi|402309844|ref|ZP_10828816.1| DEAD/DEAH box helicase [Eubacterium sp. AS15]
gi|400370387|gb|EJP23373.1| DEAD/DEAH box helicase [Eubacterium sp. AS15]
Length = 517
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 187/427 (43%), Gaps = 107/427 (25%)
Query: 15 QETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 73
QE I P + D+ S TG+GKT+++ +P++Q L + ++++++ PTR+LA+QV
Sbjct: 29 QEKIVPVAVNKCDVIGQSQTGTGKTVAFGIPLIQNLDFDEEK-IQSVIMTPTRELAIQVT 87
Query: 74 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 133
+ + + LL LP AV L G
Sbjct: 88 A------------------------EINRLLRF-LP---------TKAVALYGG------ 107
Query: 134 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 193
+EI+ IKR L+ I+VATPGRLMDHI R E++
Sbjct: 108 ---EEITRQIKR-----------------LKDRPAIIVATPGRLMDHIRR-RTVKTEYIN 146
Query: 194 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 253
+V+DE D +L + + +L+ +P+
Sbjct: 147 TVVLDEADEMLSMGFVEDIEEILEQ---------------MPN----------------- 174
Query: 254 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 313
R + M+ SAT+ K+++ L PLF+ + + Y I ES K
Sbjct: 175 ------RSITMLFSATMPDRIKKISEKFLKDPLFVRVERKTLTVDSIDQKYIQIQESD-K 227
Query: 314 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-IKIKEYSGLQRQSVRSKTL 372
L LL CI+F + L + L +LR K++ G +Q R K L
Sbjct: 228 FDALCRLLDIYQPPLCIIFGRTKRRVDELISGL----QLRDYKVEGIHGDMKQDRREKVL 283
Query: 373 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 432
+ F++G I++LV++D RG+D+ GV +V+N+D P I+ Y+HR GRT RAG+ G FT
Sbjct: 284 ERFKKGNIRILVATDVAARGLDISGVTHVINFDLPQEIEGYVHRIGRTGRAGKSGVSFTF 343
Query: 433 LHKDEVK 439
+H E++
Sbjct: 344 VHPKEME 350
>gi|182413406|ref|YP_001818472.1| DEAD/DEAH box helicase [Opitutus terrae PB90-1]
gi|177840620|gb|ACB74872.1| DEAD/DEAH box helicase domain protein [Opitutus terrae PB90-1]
Length = 403
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 178/417 (42%), Gaps = 111/417 (26%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 85
D+ ++ TG+GKT ++ALPI+Q LS LR L++ PTR+LALQV
Sbjct: 42 DVIGSAQTGTGKTAAFALPIIQRLSTHG--RLRCLILEPTRELALQV------------- 86
Query: 86 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 145
++ F A L V + G
Sbjct: 87 --------------------------EEAFHKFAKFTDLRVTIVYG-------------- 106
Query: 146 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 205
G+ Y + +L+ +DIL ATPGRL+DH+ +LE + LV+DE DR+L
Sbjct: 107 -----GVGYGKQ--TSDLKRGMDILAATPGRLLDHLGQGN-CSLEDVEILVLDEVDRMLD 158
Query: 206 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 265
+LP V K ++RC P R +
Sbjct: 159 ---MGFLPDVR-------------------------KIVQRC---------PKARQT-LF 180
Query: 266 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES---YKLICESKLKPLYLVALLQ 322
SATL + +LA LH+P + G R + P S Y ++ K L L LL+
Sbjct: 181 FSATLPPELEQLAGWALHNPTKVEIG--RVRSPAETVSHGFYPVVASQKFDLLQL--LLE 236
Query: 323 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 382
+ ++F + R+ L G + + QR+ R + L F+ GK +V
Sbjct: 237 RTEFKSVLIFCRTRMGADRIAHRLKTKGHT-VGVMHSDRSQRE--RIEALDGFKSGKFEV 293
Query: 383 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
LV++D RG+D+ GV++V+NYD P + Y+HR GRT RA G FTL+ +++V+
Sbjct: 294 LVATDIAARGLDIAGVSHVINYDVPENPEDYVHRIGRTGRAHHTGDAFTLVTEEDVR 350
>gi|407782464|ref|ZP_11129676.1| DEAD/DEAH box helicase [Oceanibaculum indicum P24]
gi|407205829|gb|EKE75795.1| DEAD/DEAH box helicase [Oceanibaculum indicum P24]
Length = 515
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 188/444 (42%), Gaps = 115/444 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR------ 55
G + P+Q + I P L RDL + TG+GKT ++ALPI+ L+
Sbjct: 21 GYETPTPIQA----QAIPPVLTGRDLMGIAQTGTGKTAAFALPILNRLTEEGNHIKTPRG 76
Query: 56 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 115
R L++ PTR+LA Q IAE + L +S V VF
Sbjct: 77 SCRVLILSPTRELASQ---------------------IAESFRVYGKFLNLS---VATVF 112
Query: 116 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 175
G+S G P+ +A LQ VDI+VATPG
Sbjct: 113 G------GVSAG------------------PQAKA------------LQRGVDIVVATPG 136
Query: 176 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 235
RL+DH+ R L+ + V+DE D++L + + +++ + +N F A+
Sbjct: 137 RLIDHLQ-NRVVRLDQVEIFVLDEADQMLDMGFIQPIRRIVKTLPAKRQNLFFSAT---- 191
Query: 236 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 295
PR ++ L+ L DP K+A P+ T
Sbjct: 192 ----------------------MPREIE-TLAGELLHDPAKVAVT----PVASTA----- 219
Query: 296 KLPERLESYKLICESKLKPLYLVALLQ--SLGEEKCIVFTSSVESTHRLCTLLNHFGELR 353
ER+ + + LK L LL +G + +VFT + ++ L G +
Sbjct: 220 ---ERVSQQVIFVPTGLKRALLADLLSDAQMGFGRTLVFTRTKHGADKVVRYLEGAGIVS 276
Query: 354 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 413
I G + QS R + L AFR+G +VL+++D RG+DV+GV +V+NYD P ++Y
Sbjct: 277 AAIH---GNKSQSQRERALLAFRDGACKVLIATDIAARGIDVDGVTHVINYDLPNIAESY 333
Query: 414 IHRAGRTARAGQLGRCFTLLHKDE 437
+HR GRTARAG G + ++E
Sbjct: 334 VHRIGRTARAGADGMAISFCDREE 357
>gi|320157377|ref|YP_004189756.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus MO6-24/O]
gi|319932689|gb|ADV87553.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus MO6-24/O]
Length = 408
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 198/467 (42%), Gaps = 115/467 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLP 64
P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L + R R L++ P
Sbjct: 26 PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYLQDFPRRKPGPARVLILTP 83
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+ QV D A+A L
Sbjct: 84 TRELAM---------------------------------------QVADQARALAKNTSL 104
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQSAVDILVATPGRLMDHINA 183
++ G G+ Y + D+L Q DI+VATPGRLM++I A
Sbjct: 105 NIFTITG-------------------GVQYQEHADILATTQ---DIVVATPGRLMEYIQA 142
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
R F + +L++DE DR+L + PTV +L+ NE R+ T L SA T
Sbjct: 143 ER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NECRWR-KQTMLFSA-----T 189
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
+ GVE GF +A L DP A +D E + +++
Sbjct: 190 LEGKGVE-GF-------------TADLLNDP---ADID---------AEPSRRERKKITQ 223
Query: 304 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
+ +S L L+ + + E+ IVF + E RL L H ++ G
Sbjct: 224 WYYRADSMEHKLALLKDIINNQAERTIVFLKTRE---RLADLRAHLESEQVNCAWIQGEM 280
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R+ + FR+G + VL+++D RG+D+ V++VVN+D P Y+HR GRTARA
Sbjct: 281 PQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFDMPRSADVYLHRIGRTARA 340
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
G+ G +++ + ++ + D I ++ LRP +
Sbjct: 341 GKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKELRPQH 381
>gi|407792739|ref|ZP_11139775.1| ATP-dependent RNA helicase, partial [Idiomarina xiamenensis 10-D-4]
gi|407216997|gb|EKE86833.1| ATP-dependent RNA helicase, partial [Idiomarina xiamenensis 10-D-4]
Length = 393
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 49/297 (16%)
Query: 150 AGICYDPEDVLQELQSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREA 207
G+ +P+ + +L+ VDILVATPGRL+D NA R LE LV+DE DR+L
Sbjct: 109 GGVKINPQ--MMKLRKGVDILVATPGRLLDLYQQNAIRFPKLE---VLVLDEADRMLDMG 163
Query: 208 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 267
+ + +++L LP+ +L + S
Sbjct: 164 FIHDIKKIIKL---------------LPNQRQTL-----------------------MFS 185
Query: 268 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 327
AT + D LA+ ++ P ++ ER+E E KP L+ +L+ L
Sbjct: 186 ATFSNDIRALAKGLVNDPAEISVAPAN-STAERIEQILYAAEKSQKPRMLMQILRELNLP 244
Query: 328 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 387
+ IVF+ + +RL L+ G L I G + Q R+K L F+ G++QVLV++D
Sbjct: 245 QVIVFSRTKHGANRLVKQLHSDGFLAAAI---HGNKSQGARTKALADFKSGQVQVLVATD 301
Query: 388 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
RG+D+E + V+NYD P + Y+HR GRT RAGQ G +L+ +E K K +
Sbjct: 302 IAARGLDIEKLPYVINYDLPQVAEDYVHRIGRTGRAGQTGHAISLVMDEEFKTLKAI 358
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RA-VRCLR 58
G + P+Q + I L +D+ + TG+GKT + LPI++ L + RA R
Sbjct: 20 GYTEPTPIQA----QAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEMLKDGPRAQANTAR 75
Query: 59 ALVVLPTRDLALQVNSARCKYCC 81
L++ PTR+LA QV + Y
Sbjct: 76 VLILTPTRELAAQVGESVATYGA 98
>gi|171913474|ref|ZP_02928944.1| DEAD/DEAH box helicase-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 452
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 188/448 (41%), Gaps = 113/448 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN----RAVRCL 57
G S P+Q A + + D+ + TG+GKT ++ LP++ L+ +R +
Sbjct: 20 GYSEPTPIQAAAIPQVVA----GHDMIGIAQTGTGKTAAFTLPMLHLLAQLHGQGPLRGI 75
Query: 58 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP-QVKDVFA 116
+AL++ PTR+L Q++ Y A H LP +V +F
Sbjct: 76 KALILAPTRELVAQIHDNVRAY---------AKH----------------LPLKVAMIFG 110
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
+ +RP++EA L++ D+++ATPGR
Sbjct: 111 GVG------------------------ERPQIEA------------LRAGTDLVIATPGR 134
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L+D + G L +LV+DE DR+L FLPS
Sbjct: 135 LIDLMGQRHG-NFNSLEFLVLDEADRMLDMG-------------------------FLPS 168
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
++R K P R ++ SATL+++ L L+HP + G+ R
Sbjct: 169 ------------IKRIVKALPKKRQT-LLFSATLSKEIEALTHEFLNHPKTVQIGK-RSN 214
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
E + + LKP LV LL+ +VF+ R+ L+ +G IK
Sbjct: 215 PAESVTQFVYEVPKHLKPALLVHLLKDPAFNMVLVFSRMKHGADRIARHLDRYG---IKT 271
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
+ Q+ R + L F+ G +VLV++D RG+DV+G+++VVNYD P + + Y+HR
Sbjct: 272 VTLHSNRTQNQRLRALADFKSGAARVLVATDIAARGIDVDGISHVVNYDFPMHAEDYVHR 331
Query: 417 AGRTARAGQLGRCFTLLHKDEVKRFKKL 444
GRT RA +G + + ++ K L
Sbjct: 332 IGRTGRAHAVGDAISFISPEDHGPLKSL 359
>gi|161486658|ref|NP_933453.2| ATP-dependent RNA helicase SrmB [Vibrio vulnificus YJ016]
Length = 408
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 198/467 (42%), Gaps = 115/467 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLP 64
P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L + R R L++ P
Sbjct: 26 PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYLQDFPRRKPGPARVLILTP 83
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+ QV D A+A L
Sbjct: 84 TRELAM---------------------------------------QVADQARALAKNTSL 104
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQSAVDILVATPGRLMDHINA 183
++ G G+ Y + D+L Q DI+VATPGRLM++I A
Sbjct: 105 NIFTITG-------------------GVQYQEHADILATTQ---DIVVATPGRLMEYIQA 142
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
R F + +L++DE DR+L + PTV +L+ NE R+ T L SA T
Sbjct: 143 ER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NECRWR-KQTMLFSA-----T 189
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
+ GVE GF +A L DP A +D E + +++
Sbjct: 190 LEGKGVE-GF-------------TADLLNDP---ADID---------AEPSRRERKKITQ 223
Query: 304 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
+ +S L L+ + + E+ IVF + E RL L H ++ G
Sbjct: 224 WYYRADSMEHKLALLKDIINNQAERTIVFLKTRE---RLADLRAHLESEQVNCAWIQGEM 280
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R+ + FR+G + VL+++D RG+D+ V++VVN+D P Y+HR GRTARA
Sbjct: 281 PQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFDMPRSADVYLHRIGRTARA 340
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
G+ G +++ + ++ + D I ++ LRP +
Sbjct: 341 GKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKELRPQH 381
>gi|37197585|dbj|BAC93424.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
Length = 441
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 198/467 (42%), Gaps = 115/467 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLP 64
P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L + R R L++ P
Sbjct: 59 PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYLQDFPRRKPGPARVLILTP 116
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+ QV D A+A L
Sbjct: 117 TRELAM---------------------------------------QVADQARALAKNTSL 137
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQSAVDILVATPGRLMDHINA 183
++ G G+ Y + D+L Q DI+VATPGRLM++I A
Sbjct: 138 NIFTITG-------------------GVQYQEHADILATTQ---DIVVATPGRLMEYIQA 175
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
R F + +L++DE DR+L + PTV +L+ NE R+ T L SA T
Sbjct: 176 ER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NECRWR-KQTMLFSA-----T 222
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
+ GVE GF +A L DP A +D E + +++
Sbjct: 223 LEGKGVE-GF-------------TADLLNDP---ADID---------AEPSRRERKKITQ 256
Query: 304 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
+ +S L L+ + + E+ IVF + E RL L H ++ G
Sbjct: 257 WYYRADSMEHKLALLKDIINNQAERTIVFLKTRE---RLADLRAHLESEQVNCAWIQGEM 313
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R+ + FR+G + VL+++D RG+D+ V++VVN+D P Y+HR GRTARA
Sbjct: 314 PQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFDMPRSADVYLHRIGRTARA 373
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
G+ G +++ + ++ + D I ++ LRP +
Sbjct: 374 GKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKELRPQH 414
>gi|331005215|ref|ZP_08328608.1| ATP-dependent RNA helicase RhlE [gamma proteobacterium IMCC1989]
gi|330420958|gb|EGG95231.1| ATP-dependent RNA helicase RhlE [gamma proteobacterium IMCC1989]
Length = 464
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 169/390 (43%), Gaps = 85/390 (21%)
Query: 112 KDVFAAIAPAVGLSVG--------LAVGQSSIADEISELIKRPKLE-------------- 149
+DV AA G + G L+ GQ + A+++ L+ P E
Sbjct: 39 RDVMAAAQTGTGKTAGFTLPLLEILSKGQPARANQVRALVLTPTRELAAQVAESVETYGK 98
Query: 150 ----------AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 199
G+ +P+ + +L+ VDIL+ATPGRL+D ++ + L L++DE
Sbjct: 99 HLKLRSAVVFGGVKINPQ--MMKLRGGVDILIATPGRLLD-LHQQNAMSFNKLEILILDE 155
Query: 200 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 259
DR+L G + IR+ K P
Sbjct: 156 ADRMLD--------------------------------MGFINDIRKI-----LKALPEK 178
Query: 260 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA 319
R ++ SAT + D LA+ ++ P+ ++ + + + + K KP LV
Sbjct: 179 RQ-NLMFSATFSDDIRDLAKTIVNKPIEISV-TPKNSTATTVTQWIHPVDKKQKPSLLVE 236
Query: 320 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 379
L+ E+ +VF+ + ++L T L IK G + Q R++ L F+ GK
Sbjct: 237 LIYQHKWEQVLVFSRTKHGANKLATFLEKHS---IKAAAIHGNKSQGARTRALADFKAGK 293
Query: 380 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 439
++VLV++D RG+D+E + VVN D P + Y+HR GRT RAG G+ +L+ DE++
Sbjct: 294 VRVLVATDIAARGLDIEQLPQVVNIDLPNVAEDYVHRIGRTGRAGATGQAVSLVSADEIQ 353
Query: 440 RF-------KKLLQKADNDSC-PIHSIPSS 461
+ +KLL + D PIH +P S
Sbjct: 354 QLQDIERLIQKLLPRKLVDGYEPIHDVPES 383
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLS-NRAVRC--LRALVVLPTRDLALQVNSARCKY 79
RD+ + TG+GKT + LP+++ LS + R +RALV+ PTR+LA QV + Y
Sbjct: 39 RDVMAAAQTGTGKTAGFTLPLLEILSKGQPARANQVRALVLTPTRELAAQVAESVETY 96
>gi|198277297|ref|ZP_03209828.1| hypothetical protein BACPLE_03509 [Bacteroides plebeius DSM 17135]
gi|198269795|gb|EDY94065.1| DEAD/DEAH box helicase [Bacteroides plebeius DSM 17135]
Length = 438
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 182/435 (41%), Gaps = 113/435 (25%)
Query: 3 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 62
++++ + W+E DL + SPTGSGKTL+Y LP+V +L + V ++A+V+
Sbjct: 15 LNAMQEASIDAWKEG-------SDLILLSPTGSGKTLAYLLPLVSSL-KKGVEGVQAVVL 66
Query: 63 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 122
+P+R+LALQ ++ VF A+A
Sbjct: 67 VPSRELALQ---------------------------------------IEQVFKAMA--T 85
Query: 123 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 182
G V G RP +E ++ + AV ++ TPGR+ DH+N
Sbjct: 86 GFPVMSCYG------------GRPAMEE------HRTMKGISPAV--IIGTPGRMNDHLN 125
Query: 183 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 242
+ F + LV+DE D+ L +Q + V+ G L
Sbjct: 126 K-QNFEAGTVRTLVIDEFDKCLEFGFQDEMAEVI----------------------GKLP 162
Query: 243 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 302
+RR + + PR M N+ +LD FL ET + +RL
Sbjct: 163 ALRRRFLLSATDAEEIPRFTGM----------NRTLKLD-----FLNPEET---VSQRLS 204
Query: 303 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 362
Y++ K K L LL +LG E +VF + ES R+ L+ +++ + + G
Sbjct: 205 VYRVTSPVKDKLETLYKLLCTLGNESTLVFCNHRESVDRVGKYLH---SMKVYCETFHGG 261
Query: 363 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 422
Q R + L FR G + +S+D RG+D+ + +VV+Y P +IHR GRTAR
Sbjct: 262 MEQDDRERALYKFRNGSCHIFISTDLAARGLDIPDIRHVVHYHLPVAEDGFIHRNGRTAR 321
Query: 423 AGQLGRCFTLLHKDE 437
G F +LH +E
Sbjct: 322 WEAEGNAFLILHDEE 336
>gi|321250140|ref|XP_003191703.1| hypothetical protein CGB_A8530W [Cryptococcus gattii WM276]
gi|317458170|gb|ADV19916.1| Hypothetical protein CGB_A8530W [Cryptococcus gattii WM276]
Length = 860
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 186/439 (42%), Gaps = 101/439 (23%)
Query: 4 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRAL 60
SS F + I P L RD+ ++ TGSGKTL++ +P+++ L + L A+
Sbjct: 77 SSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLERLYLEKWGPMDGLGAV 136
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q + Q++D I
Sbjct: 137 VISPTRELAVQ-----------------------------------TFMQLRD----IGK 157
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
S GL +G + +E QE ++IL+ATPGRL+ H
Sbjct: 158 YHNFSAGLVIGGKPLKEE----------------------QERLGRMNILIATPGRLLQH 195
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+++T GF + LV+DE DRLL + L ++ + FS T A GS
Sbjct: 196 LDSTVGFDPSAVKVLVLDEADRLLDLGFLPALKAIV--------SHFSPVQT----APGS 243
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LP 298
P ++ SAT ++D LA+L LH PL+++ + + +P
Sbjct: 244 -----------------RPSRQTLLFSATQSKDLAALAKLSLHEPLYISCNKPGEEGVMP 286
Query: 299 ERLESYKLIC--ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR--I 354
LE Y + E KL L+ ++S + K IVF +S + ++ + F L +
Sbjct: 287 ANLEQYYAVVPLERKLDALW--GFVKSHLKMKGIVFVTSGKQVRQVRFIFETFRRLHPGL 344
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ G Q+Q R + F K +L+ +D RG+D V+ V+ D P + TYI
Sbjct: 345 PLMHLHGKQKQPTRLDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYI 404
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTAR G T+L
Sbjct: 405 HRVGRTARYQSAGTALTIL 423
>gi|339998715|ref|YP_004729598.1| ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC 12419]
gi|339512076|emb|CCC29797.1| putative ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC
12419]
Length = 451
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 189/446 (42%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT ++LP++Q L + R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFSLPLLQHLITQQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA Q+ Y NI L+ VF +
Sbjct: 87 LAAQIGENIRDYSQYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ DVL VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DVL----------VATPGRLLDLEHQNAV 145
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+ L+ + LV+DE DR+L G + I
Sbjct: 146 K---LDQVEILVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR K P+ ++ SAT + D LA+ LH+PL + R E++ +
Sbjct: 171 RRVLA------KLPPKRQNLLFSATFSDDIKALAEKLLHNPLEIEVAR-RNTASEQVTQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L ++ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSQMIGQGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ +KLL+K
Sbjct: 341 ATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|375147728|ref|YP_005010169.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361061774|gb|AEW00766.1| DEAD/DEAH box helicase domain protein [Niastella koreensis GR20-10]
Length = 563
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 108/439 (24%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+DL + TG+GKT ++ LP++ L N ++ +ALVV PTR+L +Q+ +
Sbjct: 41 KDLVGLAQTGTGKTAAFGLPLLH-LVNEQLKHPQALVVCPTRELCMQI--------VNEV 91
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
G F P G+ V G + I +I
Sbjct: 92 EG----------------------------FKKFIP--GMFVAAVYGGAPIGQQI----- 116
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 204
+EL+ V I+VATPGRL+D I + LE + Y+++DE D +L
Sbjct: 117 ----------------RELRRGVQIVVATPGRLIDLIE-RKAIDLEQIQYVILDEADEML 159
Query: 205 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 264
+Q + +L+ T E + ++T P IRR +R KD P V
Sbjct: 160 NMGFQDDIEFILKNT-PKREATWLFSATMPPE-------IRRVS-KRYMKD-PIEVTVGK 209
Query: 265 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 324
V SA NK ++ H +LT+ + RY+ +RL + +Y
Sbjct: 210 VNSA------NK----NIDHQYYLTSAQHRYEALKRLIDFN-------PGIY-------- 244
Query: 325 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 384
I+FT + + L G I G Q R K + FRE +Q+L+
Sbjct: 245 ----GIIFTRTKADAQDIAEKLTREG---YDIDALHGDLTQQQRDKVMGDFREKTLQLLI 297
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 444
++D RG+DV+G+ +V+NY+ P ++ Y HR+GRT RAG+ G C +++H V+ K+
Sbjct: 298 ATDVAARGIDVQGITHVINYELPDDVEVYTHRSGRTGRAGKTGVCMSIVH---VRELGKM 354
Query: 445 LQKADNDSCPIH--SIPSS 461
Q P H IP+
Sbjct: 355 RQIQTIVQAPFHKLEIPTG 373
>gi|405118120|gb|AFR92895.1| ATP-dependent RNA helicase DBP4 [Cryptococcus neoformans var.
grubii H99]
Length = 858
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 188/441 (42%), Gaps = 103/441 (23%)
Query: 4 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRAL 60
SS F A+ I P L RD+ ++ TGSGKTL++ +P+++ L + L A+
Sbjct: 77 SSHFLNPTAIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLERLYLEKWGPMDGLGAV 136
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q + Q++D I
Sbjct: 137 VISPTRELAVQ-----------------------------------TFMQLRD----IGK 157
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
S GL +G + +E QE ++IL+ATPGRL+ H
Sbjct: 158 YHNFSAGLVIGGKPLKEE----------------------QERLGRMNILIATPGRLLQH 195
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+++T GF + LV+DE DRLL + L ++ + FS T A GS
Sbjct: 196 LDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIV--------SHFSPVQT----APGS 243
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LP 298
P ++ SAT ++D LA+L LH PL+++ + + +P
Sbjct: 244 -----------------RPSRQTLLFSATQSKDLAALAKLSLHEPLYISCNKPGEEGVMP 286
Query: 299 ERLESYKLIC--ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT--LLNHFGELR- 353
LE Y + E KL L+ ++S + K IVF +S + ++ + F L
Sbjct: 287 ANLEQYYAVVPLERKLDALW--GFVKSHLKMKGIVFVTSGKQARQVLVRFIFETFRRLHP 344
Query: 354 -IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 412
+ + G Q+Q R + F K +L+ +D RG+D V+ V+ +D P + T
Sbjct: 345 GLPLMHLHGKQKQPTRLDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQHDCPDDVDT 404
Query: 413 YIHRAGRTARAGQLGRCFTLL 433
YIHR GRTAR G T+L
Sbjct: 405 YIHRVGRTARYQSAGTALTIL 425
>gi|340508005|gb|EGR33819.1| hypothetical protein IMG5_036350 [Ichthyophthirius multifiliis]
Length = 347
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 47/313 (15%)
Query: 162 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 221
EL+ D++++TPGRL+DH+ ++ L++L LV DE D+ L +++ + +LQ
Sbjct: 7 ELRRFPDLIISTPGRLIDHLRNSKCVDLDNLEILVFDEADKQLELGFESEIKEILQ---- 62
Query: 222 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 281
C +R ++ SATL L L
Sbjct: 63 ------------------------NCSRDRQ----------TLLFSATLNDSVQSLIDLA 88
Query: 282 LHHPLFL---TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 338
L P+ + + T KL +++ K+ E+ + L+A+ ++K ++F + +
Sbjct: 89 LKKPVRIKINASNSTNDKLTQKM--LKIPFEN-TREASLLAVAAKFYKDKTVIFFKTKKQ 145
Query: 339 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 398
HR+ + FG ++ + E G Q+ R + F+EGK L+++D RG+D++G+
Sbjct: 146 CHRMAII---FGLFKLSVCELHGNMTQNQRIQAFTDFKEGKYSYLMATDLAARGLDIQGL 202
Query: 399 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 458
V+NY+ P + YIHR GRTARAG+ G TL + E+K KK+L++ + + SI
Sbjct: 203 KAVINYELPTEVSRYIHRVGRTARAGKEGVSLTLGTEQELKSLKKMLKENQDSAMKKFSI 262
Query: 459 PSSLIESLRPVYK 471
P +++S + K
Sbjct: 263 PEDILKSYQDKIK 275
>gi|408825690|ref|ZP_11210580.1| DEAD/DEAH box helicase [Streptomyces somaliensis DSM 40738]
Length = 439
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 188/450 (41%), Gaps = 113/450 (25%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR--A 59
G+++ FP+Q A + L RD+ TGSGKTL++ L ++ L R A
Sbjct: 30 GVTAPFPIQAATLPNS----LAGRDVLGRDRTGSGKTLAFGLALLARLDGVRAEPKRPLA 85
Query: 60 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
LV++PTR+LA QV D A A
Sbjct: 86 LVLVPTRELAQQVT---------------------------------------DALAPYA 106
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
A+GL VG SI ++S L ++ D+LVATPGRL D
Sbjct: 107 RALGLRQATVVGGVSIGRQVSAL---------------------RAGADVLVATPGRLRD 145
Query: 180 HINATRGF-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 238
+ TRG L+ + V+DE D++ + + +L+LTR D +
Sbjct: 146 LV--TRGDCLLDDVDVTVLDEADQMTDMGFLPQITGLLELTRPDGQ-------------- 189
Query: 239 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 298
+M+ SATL ++ + L + LH P+ + T +
Sbjct: 190 ------------------------RMLFSATLDRNVDSLVRRYLHDPVVHSVDPT-AGVV 224
Query: 299 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 358
+E + L + K + G + I+F +++ H + L H + ++
Sbjct: 225 TSMEHHVLHVQEADKNATATEIAARDG--RVIMF---LDTKHAVDRLTKHLLKSGVRASA 279
Query: 359 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 418
G + Q R++TL F+EG + VLV+++ RG+ V+ ++ VVN D PA K Y+HR G
Sbjct: 280 LHGGKSQPQRTRTLTQFKEGHVTVLVATNVAARGIHVDDLDLVVNVDPPADHKDYLHRGG 339
Query: 419 RTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RTARAG+ G TL+ + + L+ A
Sbjct: 340 RTARAGESGSVVTLVLPHQRRDMDSLMSHA 369
>gi|157146569|ref|YP_001453888.1| ATP-dependent RNA helicase RhlE [Citrobacter koseri ATCC BAA-895]
gi|157083774|gb|ABV13452.1| hypothetical protein CKO_02330 [Citrobacter koseri ATCC BAA-895]
Length = 454
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 188/446 (42%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT + LP++Q L + R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITQQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA Q+ Y NI L+ VF +
Sbjct: 87 LAAQIGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ DVL VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DVL----------VATPGRLLDLEHQNAV 145
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+ L+ + LV+DE DR+L G + I
Sbjct: 146 K---LDQIEILVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR K P+ ++ SAT + D LA+ LH+PL + R E++ +
Sbjct: 171 RRVLA------KLPPKRQNLLFSATFSDDIKALAEKLLHNPLEIEVAR-RNTASEQVTQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L ++ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSQMIGKGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ +KLL+K
Sbjct: 341 ATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|336249396|ref|YP_004593106.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
gi|334735452|gb|AEG97827.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
Length = 446
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 189/446 (42%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN-----RAVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT + LP++Q L+ + R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLQRLTQDQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA QV Y NI L+ VF +
Sbjct: 87 LAAQVGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ D+L VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DIL----------VATPGRLLDLEHQNA- 144
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+L+ + LV+DE DR+L G + I
Sbjct: 145 --VSLDKVEVLVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR K PR ++ SAT + + LA+ LH+PL + R E++ +
Sbjct: 171 RRVLA------KLPPRRQNLLFSATFSDEIKALAEKLLHNPLEVEVAR-RNTASEQITQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L L+ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSQLIGEGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGGIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ ++LL+K
Sbjct: 341 ATGEALSLVCVDEHKLLRDIERLLKK 366
>gi|420099387|ref|ZP_14610620.1| ATP-dependent RNA helicase RhlE [Escherichia coli O111:H11 str.
CVM9455]
gi|394423123|gb|EJE96397.1| ATP-dependent RNA helicase RhlE [Escherichia coli O111:H11 str.
CVM9455]
Length = 376
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 189/452 (41%), Gaps = 117/452 (25%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-----AVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT + LP++Q L R R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA Q+ Y NI L+ VF +
Sbjct: 87 LAAQIGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ DVL VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DVL----------VATPGRLLDLEHQNAV 145
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+ L+ + LV+DE DR+L G + I
Sbjct: 146 K---LDQVEILVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR P R ++ SAT + D LA+ LH+PL + R +++ +
Sbjct: 171 RRV-----LTKLPAKR-QNLLFSATFSDDIKALAEKLLHNPLEIEVAR-RNTASDQVTQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L ++ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQKADNDSC 453
G +L+ DE ++ +KLL+K D C
Sbjct: 341 ATGEALSLVCVDEHKLLRDIEKLLKKRDPAHC 372
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 75/334 (22%)
Query: 135 IADEISELIKR----PKLEAGICYDPEDV---LQELQSAVDILVATPGRLMDHINATRGF 187
+AD++ E +KR L + + + D+ + L+ ++LVATPGRL+DH+ +
Sbjct: 105 LADQVYESVKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVE-QKNV 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L + LV+DE DR+L +LP + ++ R LP+ +R
Sbjct: 164 NLSQVGILVLDEADRMLD---MGFLPDLERIIR------------LLPA--------QRQ 200
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL----------TTGETRYKL 297
G ++ SAT + + KL + L+HP+ + T + YK+
Sbjct: 201 G---------------LLFSATFSNEIRKLGRSYLNHPVEIEVAARNATANTITQIAYKM 245
Query: 298 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIK 357
P S K +V L++S G + IVF+++ T RL L G +K +
Sbjct: 246 P-----------SDAKRAAVVHLVKSRGLNQVIVFSNTKIGTARLARDLERDG---VKAE 291
Query: 358 EYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 417
G + Q+ R K L+AF+ G+++VLV++D RG+DV GV V+NYD P + Y+HR
Sbjct: 292 SIHGDKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 351
Query: 418 GRTARAGQLGRCFTLLHKDEVKRF----KKLLQK 447
GRT RAG G L DE +RF +KL+++
Sbjct: 352 GRTGRAGASGEAIALFTPDE-ERFLLDIEKLIKR 384
>gi|88857449|ref|ZP_01132092.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family protein [Pseudoalteromonas
tunicata D2]
gi|88820646|gb|EAR30458.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family protein [Pseudoalteromonas
tunicata D2]
Length = 435
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 194/441 (43%), Gaps = 113/441 (25%)
Query: 2 GISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN----RAVRC 56
G + L PVQ +A+ G D+ N+ TG+GKT ++ALPI+Q L + R
Sbjct: 20 GYTELSPVQRLAIPHVRRG-----HDVLANAQTGTGKTAAFALPILQKLIDTPTPRVASN 74
Query: 57 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
+ALV+ PTR+LA Q IA ++ L IS V +F
Sbjct: 75 AKALVLAPTRELAEQ---------------------IANSFERYGKYLDIS---VAAIFG 110
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
++ G A+ KL+AG DI+VATPGR
Sbjct: 111 GVSHK-----GQAI----------------KLKAG---------------ADIIVATPGR 134
Query: 177 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 236
L++HI +L ++ +LV+DE DR+L ++ + L + N+ R T L S
Sbjct: 135 LLEHIQMC-NVSLSNVSFLVLDEADRMLD---MGFINDIKMLMAAVNDER----QTLLFS 186
Query: 237 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 296
A YP +K SA++ + P K+ Q + T Y
Sbjct: 187 A-------------------TYPSSMKQ-FSASVLKQP-KIVQATKDNSTAETVQHVVYP 225
Query: 297 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 356
+ ER ++ +L+ E L+ + +VF + E+ + LN FG I
Sbjct: 226 VEERRKN-ELLSE----------LIGRKNWHQVLVFVNMKETASSVVEELNQFG---ISA 271
Query: 357 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 416
G + Q R + L+ F+EGK++VLV+++ RG+D+ G+ V+N D P + Y+HR
Sbjct: 272 AVCHGDKTQGARRRALREFKEGKVRVLVATEVAARGLDIVGLERVINVDLPFLAEDYVHR 331
Query: 417 AGRTARAGQLGRCFTLLHKDE 437
GRT RAG +G+ + + ++E
Sbjct: 332 IGRTGRAGNIGQAVSFVSREE 352
>gi|444352450|ref|YP_007388594.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
gi|443903280|emb|CCG31054.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
Length = 446
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 189/446 (42%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN-----RAVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT + LP++Q L+ + R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLQRLTQEQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA QV Y NI L+ VF +
Sbjct: 87 LAAQVGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ D+L VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DIL----------VATPGRLLDLEHQNA- 144
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+L+ + LV+DE DR+L G + I
Sbjct: 145 --VSLDKVEVLVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR K PR ++ SAT + + LA+ LH+PL + R E++ +
Sbjct: 171 RRVLA------KLPPRRQNLLFSATFSDEIKALAEKLLHNPLEVEVAR-RNTASEQITQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L L+ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSQLIGEGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGGIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ ++LL+K
Sbjct: 341 ATGEALSLVCVDEHKLLRDIERLLKK 366
>gi|385305508|gb|EIF49474.1| atp-dependent rna helicase dbp6 (dead-box protein 6) [Dekkera
bruxellensis AWRI1499]
Length = 528
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 150/293 (51%), Gaps = 38/293 (12%)
Query: 168 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 227
DI+VATPGRL+DHI + L L +LVVDE DRLL +++Q W ++ ++ E+
Sbjct: 203 DIIVATPGRLVDHI-SKFDLDLSQLRFLVVDEADRLLNQSFQNWCDVLVGKIEAEQEDD- 260
Query: 228 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 287
D+++F + K RC VK++LSATLT + KL+ L L P
Sbjct: 261 QDSNSF----YNKFKI--RC--------------VKVILSATLTTNSEKLSHLKLFKPNL 300
Query: 288 LTTGETR------YKLPERLESYKLICESKL---KPLYLVALLQSLGE--EKCIVFTSSV 336
+ + Y+LP LE Y + L KPL + L + + ++FT S
Sbjct: 301 VVINNSEELVHELYQLPPHLEEYYINIPEALSFYKPLIFLRFLLDQPDLIDHGLIFTKSN 360
Query: 337 EST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 393
E+ RL LL+ ++ + + + S + K LK F + +L+++D M+RG+
Sbjct: 361 ETAVRLSRLLQLLSSDSNQKLSVLCXNSATKSSQKRKILKEF-DINGGILIATDLMSRGL 419
Query: 394 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDEVKRFKKLL 445
+ + + VVNYD P K YIHR GRTARA + GR F+ + + + FKKL+
Sbjct: 420 NFDSIKFVVNYDLPLSTKEYIHRVGRTARANKQGRAFSFCFGEGDFRWFKKLV 472
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFER-------DLCINSPTGSGKTLSYALPIVQTLSNRA 53
GI F VQV V Q + R D +N+ TGSGKTL+Y +P+V+ L NR
Sbjct: 88 FGIEEAFSVQVNVIQSIMKAVTKNRLDPRPYGDYLVNAATGSGKTLAYLIPVVEALKNRX 147
Query: 54 VRCLRALVVLPTRDLALQV 72
V +R ++ PT+ L QV
Sbjct: 148 VPRVRCXILAPTKPLVNQV 166
>gi|198424759|ref|XP_002127650.1| PREDICTED: similar to Ddx10 protein [Ciona intestinalis]
Length = 736
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 183/451 (40%), Gaps = 111/451 (24%)
Query: 11 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR---ALVVLPTRD 67
A+ + I P + +D+ + TGSGKTL++ +PI++ L L ALV+ PTR+
Sbjct: 72 TAIQRAAIKPAMLGKDILGAAKTGSGKTLAFIIPILECLHKHNWNSLDGPGALVISPTRE 131
Query: 68 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 127
LA Q IF +V + S G
Sbjct: 132 LAFQ------------IF---------------------------EVLKKVGGKHNFSAG 152
Query: 128 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 187
L +G +++ +E + K +I++ TPGRL+ H++ T F
Sbjct: 153 LLIGGNNVKEEAHSVGK----------------------TNIIICTPGRLLQHMDTTSYF 190
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
+ +L L++DE DR+L ++ L ++ EN LPS +L
Sbjct: 191 HMNNLKMLILDEADRILDMGFKTTLDAII-------EN--------LPSERQTL------ 229
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-GETRYKLPERLESYKL 306
+ SAT T+ LA+L L P +++ E ++ P+ L +
Sbjct: 230 -----------------LFSATQTKSVKDLARLSLRDPAYISVHSEAKHSTPQGLTQRFI 272
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR--IKIKEYSGLQR 364
CE K K L + +++ + KC+VF SS + + F +LR + G
Sbjct: 273 CCELKDKLNVLFSFIRNHQKSKCLVFVSSCKQVQ---FIFAAFCKLRPGTPMLHLHGRMN 329
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R + F K VLV++D RG+D ++ VV D P TYIHRAGRTAR
Sbjct: 330 QLRRMSVYQEFCRKKFAVLVATDIAARGLDFPEIDWVVQLDCPEDADTYIHRAGRTARYN 389
Query: 425 QLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 455
G +L E + K LQ N PI
Sbjct: 390 GNGNSLLVLTPTEKEAMLKHLQ---NKKVPI 417
>gi|27363997|ref|NP_759525.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus CMCP6]
gi|27360114|gb|AAO09052.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus CMCP6]
Length = 408
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 198/467 (42%), Gaps = 115/467 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLP 64
P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L + R R L++ P
Sbjct: 26 PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYLQDFPRRKPGPARVLILTP 83
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+ QV D A+A L
Sbjct: 84 TRELAM---------------------------------------QVADQARALAKNTSL 104
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQSAVDILVATPGRLMDHINA 183
++ G G+ Y + D+L Q DI+VATPGRLM++I A
Sbjct: 105 NIFTITG-------------------GVQYQEHADILATTQ---DIVVATPGRLMEYIQA 142
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
R F + +L++DE DR+L + PTV +L+ NE R+ T L SA T
Sbjct: 143 ER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NECRWR-KQTMLFSA-----T 189
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
+ GVE GF +A L DP A +D E + +++
Sbjct: 190 LEGKGVE-GF-------------TADLLNDP---ADID---------AEPSRRERKKITQ 223
Query: 304 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
+ ++ L L+ + + E+ IVF + E RL L H ++ G
Sbjct: 224 WYYRADNMEHKLALLKDIINNQAERTIVFLKTRE---RLADLRAHLESEQVNCAWIQGEM 280
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R+ + FR+G + VL+++D RG+D+ V++VVN+D P Y+HR GRTARA
Sbjct: 281 PQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFDMPRSADVYLHRIGRTARA 340
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 470
G+ G +++ + ++ + D I ++ LRP +
Sbjct: 341 GKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKELRPQH 381
>gi|358396993|gb|EHK46368.1| hypothetical protein TRIATDRAFT_218284 [Trichoderma atroviride IMI
206040]
Length = 863
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 151/343 (44%), Gaps = 97/343 (28%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
G + F VQ A + DL +++ TGSGKTL+YALPIV+ LSN + LR LV
Sbjct: 307 GYTEAFAVQTAALPLLLPTNKQPGDLLVSAATGSGKTLAYALPIVRDLSNSVITRLRCLV 366
Query: 62 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 121
VLPTR+L Q + +F L A E +
Sbjct: 367 VLPTRELVKQ---------AQEVFELCAKAYEGEDRKR---------------------- 395
Query: 122 VGLSVGLAVGQSSIADEIS-----------ELIKRPKLEAGICYDPEDVLQEL------- 163
+ +G+A+G S+A E E K+ + EA E+ L EL
Sbjct: 396 --VRIGIAIGNQSLASEQDILVTKETRYDPETYKQLEEEASSKSTSEEDLDELLTSSDTR 453
Query: 164 ----------------QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 207
S VDIL+ TPGRL++HI+ T GFTL ++ +LVVDE D+LL ++
Sbjct: 454 RTNPRIGPWQGQVIDFHSKVDILICTPGRLVEHIDQTPGFTLSYIRWLVVDEADKLLAQS 513
Query: 208 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 267
+Q WL VL F + +G+ R F D PY + K++LS
Sbjct: 514 FQGWLDVVL--------------DKFKVNHYGA----------RDFPDMPYSGVRKILLS 549
Query: 268 ATLTQDPNKLAQLDLHHP--LFLTTGE----TRYKLPERLESY 304
ATLT+D + L QL L P + L +G + LP+ L Y
Sbjct: 550 ATLTRDLSLLNQLALKRPKLIVLESGSDVQVAEHSLPDLLREY 592
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 328 KCIVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFR--EGKIQVLV 384
+ ++FT S E+ RL LL + L +I + S+R KTL+AF +++++
Sbjct: 698 RALIFTKSNEAALRLSRLLTILDKSLATQISTLTSTTPTSIRRKTLRAFTTPSSPLRLII 757
Query: 385 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 441
+SD + RG+D+ + +VVNYD P + Y+HR GRTARAG+ G +TL+ E F
Sbjct: 758 ASDLVARGIDIPKLPHVVNYDLPPSVAGYVHRVGRTARAGRTGCAWTLVGDGESGWF 814
>gi|156740947|ref|YP_001431076.1| DEAD/DEAH box helicase [Roseiflexus castenholzii DSM 13941]
gi|156232275|gb|ABU57058.1| DEAD/DEAH box helicase domain protein [Roseiflexus castenholzii DSM
13941]
Length = 450
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 193/490 (39%), Gaps = 141/490 (28%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
+G + P+Q ++ I L RD+ + TG+GKT ++ LPI+ L +RA+
Sbjct: 19 LGYHTPTPIQ----EQVIPHALAGRDVIGIAQTGTGKTAAFVLPILHHLMRGPRGRVRAM 74
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
+V PTR+LA Q++ V A+
Sbjct: 75 IVTPTRELA---------------------------------------EQIQGVIEALGK 95
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
G I+ L G+ Y + +Q L+ V+I V PGRL+DH
Sbjct: 96 HTG-------------------IRSVTLYGGVGYQGQ--IQRLRRGVEIAVVCPGRLLDH 134
Query: 181 INATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
+ RG TL+HL L +DE D++ +LP V ++
Sbjct: 135 LE--RGTLTLDHLEVLTLDEADQMFD---MGFLPDVRRI--------------------- 168
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR----- 294
+R VER M+ SAT+ LA+ L PL + G +
Sbjct: 169 ----LRLAPVER----------QTMLFSATMPDAVRSLAREALRDPLTVQIGRSAPVATV 214
Query: 295 ----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 350
Y +PE LK L+ LL+ E ++FT + RL L G
Sbjct: 215 THAIYPVPE-----------HLKTSLLIELLERTDAESVLIFTRTKHRAQRLGDTLARLG 263
Query: 351 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 410
+ G Q+ R L FR G+ Q+L ++D RG+DV +++V+NYD P
Sbjct: 264 ---YRATSLHGNLSQNRRQAALDGFRSGRYQILTATDIAARGIDVARISHVINYDMPQTA 320
Query: 411 KTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQKA----------DNDSCPIHS 457
+ Y HR GRT RA + G FTL+ + + V+ ++L+ + N + P+H
Sbjct: 321 EAYTHRIGRTGRAARTGDAFTLVTRGDTAMVRAIERLIGEPLKREIVPGFDYNAAAPVHE 380
Query: 458 IPSSLIESLR 467
S + S R
Sbjct: 381 TRSDAVHSNR 390
>gi|294868682|ref|XP_002765642.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239865721|gb|EEQ98359.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 367
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 148/338 (43%), Gaps = 63/338 (18%)
Query: 110 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 169
Q F + ++ L+ VG + + L K+P I
Sbjct: 44 QTGQQFEGLGASINLTTATIVGGLDMVTQAMSLSKKPH---------------------I 82
Query: 170 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 229
+VA+PGRL+DH+ T+GF L+ + +LV+DE DRLL ++ L ++Q D +
Sbjct: 83 IVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ----- 137
Query: 230 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 289
TFL SAT+T ++L + L P+
Sbjct: 138 --TFL-------------------------------FSATMTNKVSQLQRASLTRPVKCE 164
Query: 290 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 349
++ + + L + K K YL ALL ++F + + R+ T L H
Sbjct: 165 VAR-KFDVAKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHL 223
Query: 350 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 409
G + + G Q+ R L FR G +LV++D RG+D+ V+ V+N+D P
Sbjct: 224 GHNCVCLH---GKMTQTHRLGALNQFRAGTRSILVATDVAARGLDIPSVDVVINFDVPKN 280
Query: 410 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 447
+ YIHR GRTARAG+ GR TL+ + +++ F+++ K
Sbjct: 281 PEEYIHRVGRTARAGRTGRSVTLVTQYDIEPFQRIENK 318
>gi|58259291|ref|XP_567058.1| hypothetical protein CNA07420 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107439|ref|XP_777604.1| hypothetical protein CNBA7250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818054|sp|P0CQ83.1|DBP4_CRYNB RecName: Full=ATP-dependent RNA helicase DBP4
gi|338818055|sp|P0CQ82.1|DBP4_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP4
gi|50260298|gb|EAL22957.1| hypothetical protein CNBA7250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223195|gb|AAW41239.1| hypothetical protein CNA07420 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 859
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 186/439 (42%), Gaps = 101/439 (23%)
Query: 4 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRAL 60
SS F + I P L RD+ ++ TGSGKTL++ +P+++ L + L A+
Sbjct: 77 SSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLERLYLEKWGPMDGLGAV 136
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ PTR+LA+Q + Q++D I
Sbjct: 137 VISPTRELAVQ-----------------------------------TFMQLRD----IGK 157
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
S GL +G + +E QE ++IL+ATPGRL+ H
Sbjct: 158 YHNFSAGLVIGGKPLKEE----------------------QERLGRMNILIATPGRLLQH 195
Query: 181 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 240
+++T GF + LV+DE DRLL + L ++ + FS T A GS
Sbjct: 196 LDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIV--------SHFSPVQT----APGS 243
Query: 241 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LP 298
P ++ SAT ++D LA+L L+ PL+++ + + +P
Sbjct: 244 -----------------RPSRQTLLFSATQSKDLAALAKLSLYEPLYISCNKPGEEGVMP 286
Query: 299 ERLESYKLIC--ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR--I 354
LE Y + E KL L+ ++S + K IVF +S + R+ + F L +
Sbjct: 287 ANLEQYYAVVPLERKLDALW--GFVKSHLKMKGIVFVTSGKQARRVRFIFETFRRLHPGL 344
Query: 355 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 414
+ G Q+Q R + F K +L+ +D RG+D V+ V+ D P + TYI
Sbjct: 345 PLMHLHGKQKQPTRLDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYI 404
Query: 415 HRAGRTARAGQLGRCFTLL 433
HR GRTAR G T+L
Sbjct: 405 HRVGRTARYQSAGTALTIL 423
>gi|359795873|ref|ZP_09298486.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
gi|359366192|gb|EHK67876.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
Length = 466
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 55/339 (16%)
Query: 135 IADEISELIKR----PKLEAGICYDPEDV---LQELQSAVDILVATPGRLMDHINATRGF 187
+AD++ E +KR L + + + D+ + L+ ++LVATPGRL+DH+ +
Sbjct: 82 LADQVYESVKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVE-QKNV 140
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L + LV+DE DR+L +LP + ++ R LP+ +R
Sbjct: 141 NLSQVGILVLDEADRMLD---MGFLPDLERIIR------------LLPA--------QRQ 177
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE-SYKL 306
G ++ SAT + + KL + L+HP+ + + +YK+
Sbjct: 178 G---------------LLFSATFSNEIRKLGRSYLNHPVEIEVAARNATATTITQIAYKM 222
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
++K +V L++S G ++ IVF+++ T RL L G +K + G + Q+
Sbjct: 223 TSDAKRA--AVVHLVKSRGLKQVIVFSNTKIGTARLARDLERDG---VKAESIHGDKTQA 277
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R K L+AF+ G+++VLV++D RG+DV GV V+NYD P + Y+HR GRT RAG
Sbjct: 278 DRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNSEDYVHRIGRTGRAGAS 337
Query: 427 GRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 463
G L DE +R+ ++K P + +PS LI
Sbjct: 338 GEAIALFTADE-ERYLLDIEKLIKREVPRGTLDVPSDLI 375
>gi|386867208|ref|YP_006280202.1| ATP-dependent RNA helicase [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701291|gb|AFI63239.1| ATP-dependent RNA helicase [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 646
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 190/462 (41%), Gaps = 84/462 (18%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 61
G + FP+Q Q+T+ L RD+ TGSGKTL++ LP+V LS+ RA
Sbjct: 32 GKKTAFPIQ----QDTLPDSLAGRDVLGRGQTGSGKTLAFGLPLVSRLSD----MDRADD 83
Query: 62 VLPTRDLALQV--NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 119
RD+ Q S R K H + L Q+ DV +A
Sbjct: 84 HDFPRDMDPQALRKSLRFKRGVSKYM----PHPRGLVLAPTRELAN----QISDVLTPLA 135
Query: 120 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 179
A G++V G G+ Y E ++L DI+VA PGRL D
Sbjct: 136 DAYGMAVTTVYG-------------------GVKY--ERQFRDLDDGADIVVACPGRLED 174
Query: 180 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
I + TL + +V+DE D + A +LP + ++
Sbjct: 175 LIE-QQALTLADVRIVVLDEADEM---ADMGFLPPIKRI--------------------- 209
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
LK IR P M+ SATL +++ LH P + E +
Sbjct: 210 -LKQIR-------------PDAQHMLFSATLDHGVDEVVSEFLHDPKVHSVDEVTSNVDS 255
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 359
++ L S+ +V L S G + I+FT + +L L G I E
Sbjct: 256 M--THHLFLVSRNDKAAVVRELAS-GRGRRILFTRTKFQAKKLAHTLTQSG---IPAAEL 309
Query: 360 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 419
G Q R + L+AF G++ VLV++D RG+DV V VV + P K++ HR+GR
Sbjct: 310 HGNLSQHQRDRNLQAFESGQVNVLVATDVAARGIDVSNVGLVVQVEPPEDPKSFTHRSGR 369
Query: 420 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSS 461
TARAGQ G TL+ D+ ++ + L ++ D P+ P S
Sbjct: 370 TARAGQSGDVVTLMTPDQKRKIRHLFKEVDIKLKPVEVTPES 411
>gi|260433500|ref|ZP_05787471.1| putative ATP-dependent RNA helicase RhlE [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417328|gb|EEX10587.1| putative ATP-dependent RNA helicase RhlE [Silicibacter
lacuscaerulensis ITI-1157]
Length = 476
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 203/479 (42%), Gaps = 127/479 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS-NRA-VRCLRALVVLPTRDLAL 70
+ + I P L RD+ + TG+GKT S+ LP++ L+ RA R R+LV+ PTR+LA
Sbjct: 28 IQEGAIPPALEGRDVLGIAQTGTGKTASFVLPMITLLARGRARARMPRSLVLCPTRELAA 87
Query: 71 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 130
QV + F + L+ L +
Sbjct: 88 ---------------------------------------QVAENFDTYTKHLKLTKALLI 108
Query: 131 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTL 189
G G+ + +D L + VD+L+ATPGRL+DH RG L
Sbjct: 109 G-------------------GVSFKEQDAL--IDRGVDVLIATPGRLLDHFE--RGKLLL 145
Query: 190 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 249
+ +VVDE DR+L F+P +
Sbjct: 146 TGVQIMVVDEADRMLDMG-------------------------FIPD------------I 168
Query: 250 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGETRYKLPERLES 303
ER F P+ R + SAT+ + ++ L P + T ET + ++
Sbjct: 169 ERIFSLTPFTRQT-LFFSATMAPEIERITDTFLSAPARIEVARQATASETIEQGVVMIKG 227
Query: 304 YKLICESKLKPLYLVALLQSLGEEKC---IVFTSSVESTHRLCTLLNHFGELRIKIKEYS 360
+ E K L AL+ + G+ KC I+F + L +G I
Sbjct: 228 GRRDREGSTKRKVLRALIDAEGD-KCTNAIIFCNRKTDVDITAKSLKKYGYDAAAI---H 283
Query: 361 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 420
G QSVR++TL+ FREG ++ LV+SD RG+DV V++V N+D P++ + Y+HR GRT
Sbjct: 284 GDLDQSVRTRTLEGFREGSLRFLVASDVAARGLDVPSVSHVFNFDVPSHPEDYVHRIGRT 343
Query: 421 ARAGQLGRCFTL-LHKDE--VKRFKKLLQKA----DNDSCPIHSIPSSLIESLRPVYKS 472
RAG+ G+ TL +DE ++ +KL+QK DN P+ + P+ E +P KS
Sbjct: 344 GRAGREGKAITLCTARDEKALEAIEKLIQKEIPRLDN---PVEAEPAE-AEDKKPEKKS 398
>gi|90022842|ref|YP_528669.1| dystroglycan-type cadherin-like protein [Saccharophagus degradans
2-40]
gi|89952442|gb|ABD82457.1| DEAD/DEAH box helicase-like protein [Saccharophagus degradans 2-40]
Length = 516
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 54/328 (16%)
Query: 150 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
G+ +P+ + +L+ VDILVATPGRLMD N R + L LV+DE DR+L +
Sbjct: 130 GGVKINPQ--MMKLRGGVDILVATPGRLMDLYN-QRAVKFDQLEMLVLDEADRMLDMGFI 186
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
+ ++ + +N ++ SAT
Sbjct: 187 HDIRKIMAILPKKRQN--------------------------------------LMFSAT 208
Query: 270 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 329
+QD +LA+ +++P+ +T R++ + + K KP L L+++ ++
Sbjct: 209 FSQDIRELAKSIVNNPVEITVNPPNSTA-TRVKQWICPVDKKEKPALLTHLIKTNKWQQV 267
Query: 330 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 389
+VF+ + ++L L G ++ G + Q R+K L F+ G +++LV++D
Sbjct: 268 LVFSRTKHGANKLVKQLEGSG---LRAAAIHGNKSQGARTKALAEFKNGTVKILVATDIA 324
Query: 390 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK------ 443
RG+D++ + VVN+D P + Y+HR GRT RAG G +L+ DE + K+
Sbjct: 325 ARGLDIDQLPQVVNFDLPQVAEDYVHRIGRTGRAGAEGNAVSLVSADEFQMLKEIERLTK 384
Query: 444 --LLQKADNDSCPIHSIPSSLIESLRPV 469
L ++ P H++P S +++ RP+
Sbjct: 385 TLLTREVIQGFEPDHNLPESRLDT-RPI 411
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS-----NRAVRC 56
G + P+Q + I P L RD+ + TG+GKT + LPI++ L+ R V+
Sbjct: 37 GYETPTPIQA----QAIPPVLEGRDVMAAAQTGTGKTAGFTLPILEILAEGIENGRKVKP 92
Query: 57 --LRALVVLPTRDLALQVNSARCKY 79
RALV+ PTR+LA QV Y
Sbjct: 93 NQARALVLTPTRELAAQVGENVALY 117
>gi|147899081|ref|NP_001086608.1| ATP-dependent RNA helicase DDX55 [Xenopus laevis]
gi|82199952|sp|Q6AZV7.1|DDX55_XENLA RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|50603912|gb|AAH77172.1| Ddx55-prov protein [Xenopus laevis]
Length = 594
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 200/483 (41%), Gaps = 130/483 (26%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR-- 58
+ + + PVQ A TI + +D+ + TGSGKTL++ +P+++ L R + +
Sbjct: 27 LKFTHMTPVQSA----TIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKLKKNQ 82
Query: 59 --ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 116
AL++ PTR+LA+Q++ + H PQ +
Sbjct: 83 VGALIITPTRELAVQIDE---------VLSCFTKH----------------FPQFSQI-- 115
Query: 117 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 176
L +G S+ D DV + + +I+VATPGR
Sbjct: 116 -----------LLIGGSNPVD--------------------DVRKFKEHGGNIIVATPGR 144
Query: 177 LMDHIN-ATRGFTL----EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 231
L D G L + L L++DE DRLL ++A + T+L
Sbjct: 145 LEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTIL--------------- 189
Query: 232 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 291
FLP RR G + SAT TQ+ L + L +P+ +
Sbjct: 190 GFLPKQ-------RRTG----------------LFSATQTQELENLVRAGLRNPVRIAVK 226
Query: 292 E------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 345
E + K P RL++Y +IC++ K L+A LQ +EK +VF S+ C
Sbjct: 227 EKGVAATSTQKTPIRLQNYYMICKADEKFNKLIAFLQKRKQEKHLVFFST-------CAC 279
Query: 346 LNHFGE-LRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
+ ++G+ L + +K + + + R++ FR+ +LV +D M RG+D+ VN
Sbjct: 280 VEYYGKALEMLLKPVKVMCIHGKMKHKRNRIFTEFRKINSGILVCTDVMARGIDIHEVNW 339
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 460
VV YD P+ ++HR GRTAR G G L E L + N CP+ +
Sbjct: 340 VVQYDPPSSASAFVHRCGRTARIGHHGSALVFLLPMEESYVSFL---SINQKCPLQEMTE 396
Query: 461 SLI 463
+I
Sbjct: 397 LII 399
>gi|283784562|ref|YP_003364427.1| ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
gi|282948016|emb|CBG87580.1| putative ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
Length = 451
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 188/446 (42%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
V Q+ I L RDL ++ TG+GKT + LP++Q L + R +RAL++ PTR+
Sbjct: 27 VQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITQQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA Q+ Y NI L+ VF +
Sbjct: 87 LAAQIGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ DVL VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DVL----------VATPGRLLDLEHQNAV 145
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+ L+ + LV+DE DR+L G + I
Sbjct: 146 K---LDQIEILVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR P R ++ SAT + D +LA+ LH+PL + R E++ +
Sbjct: 171 RRV-----LAKLPAKRQ-NLLFSATFSDDIKRLAEKLLHNPLEIEVAR-RNTASEQVTQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L ++ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSQMIGQGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ +KLL+K
Sbjct: 341 ATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|392962181|ref|ZP_10327628.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans DSM
17108]
gi|421055965|ref|ZP_15518892.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans B4]
gi|421068803|ref|ZP_15530040.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans A12]
gi|421073056|ref|ZP_15534160.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans A11]
gi|392438381|gb|EIW16204.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans B4]
gi|392439079|gb|EIW16825.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans A12]
gi|392445483|gb|EIW22815.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans A11]
gi|392452939|gb|EIW29844.1| DEAD/DEAH box helicase domain protein [Pelosinus fermentans DSM
17108]
Length = 447
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 174/421 (41%), Gaps = 120/421 (28%)
Query: 25 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 84
+D+ S TG+GKTL++ LPI++ + + ++AL++ PTR+LALQ+
Sbjct: 41 KDVVGQSQTGTGKTLAFILPILEKIEI-SKPIVQALIITPTRELALQITRE--------- 90
Query: 85 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 144
A +A +G+ V G + +I
Sbjct: 91 ------------------------------VAKLADQLGIQVLSVYGGQDVDRQI----- 115
Query: 145 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRL 203
++L+ I++ TPGRLMDH+ RG LE++ LV+DE D++
Sbjct: 116 ----------------KKLKGGAQIVIGTPGRLMDHLR--RGTIQLENVTKLVLDEADQM 157
Query: 204 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 263
L + +L V +L R + R +
Sbjct: 158 L---HMGFLEDVEELVRQTSNKRQT----------------------------------- 179
Query: 264 MVLSATLTQDPNKLAQLDLHHPL-------FLTTGETRYKLPERLESYKLICESKLKPLY 316
M+ SAT+ LA + PL +T E + + E ES K++ S + Y
Sbjct: 180 MLFSATMPSKIRGLADRYMRKPLDIRIQTKNITLDEIKQIMVEVPESEKIVKLSSMIDEY 239
Query: 317 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 376
L IVF + + + L+ G + E G Q R + +K FR
Sbjct: 240 RPYL--------AIVFCHTKKRAIAVNMALSQKG---YETDELHGELSQPKREQVMKRFR 288
Query: 377 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 436
E KIQ+LV++D RG+DVEGV ++ NYD P + +YIHR GRT RAGQ G TL+
Sbjct: 289 EAKIQILVATDIAARGLDVEGVTHIFNYDIPHDVDSYIHRIGRTGRAGQAGMAITLIDPH 348
Query: 437 E 437
E
Sbjct: 349 E 349
>gi|339243587|ref|XP_003377719.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
gi|316973448|gb|EFV57036.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
Length = 563
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 189/455 (41%), Gaps = 113/455 (24%)
Query: 1 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 60
MGI PVQ+ E L +D S TG+GKTL++A+PI+Q LS + AL
Sbjct: 123 MGIVEPSPVQLNCIPEI----LIGKDAIGCSKTGTGKTLAFAIPIIQRLSEDPY-GIYAL 177
Query: 61 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 120
V+ P+R+LA Q+ + F +
Sbjct: 178 VLTPSRELAFQIG---------------------------------------EQFQVLGK 198
Query: 121 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 180
+GL + VG + ++ +E+ +P IL+ATPGRL DH
Sbjct: 199 PLGLRTSIVVGGRDMIEQANEIANQPH---------------------ILIATPGRLADH 237
Query: 181 INATRGFTLEH-LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 239
I + H + + V+DE DRLL Y L T+++ + +
Sbjct: 238 ILSRSDENWFHKIKFFVLDEADRLLDGQYDLQLETIIEKLPKERQT-------------- 283
Query: 240 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPE 299
++ SAT+T +L +L + P F + +
Sbjct: 284 ------------------------LLFSATITDALCRLQELSVKKPFFWQEQSCTVTV-D 318
Query: 300 RLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNHFGELRIK 355
LE ++C +K Y+ +++ ++ ++F+ S L + F +L K
Sbjct: 319 TLEQRYVLCPKSVKDAYVTYVVKLFTDKNPQSSVLIFSHSCYECQALTLM---FADLGFK 375
Query: 356 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 415
+ + Q R + F+ ++++L+ +D +RG+D+ V+ V+N++ PA KTYIH
Sbjct: 376 VGALHSMISQRERLSSFNLFKSNQLKILICTDVASRGLDLPFVDLVINHNIPAVAKTYIH 435
Query: 416 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 450
R GR+ARAG+ GR T + + ++ + ++KA N
Sbjct: 436 RVGRSARAGRSGRAVTFITQYDIALLQA-IEKAIN 469
>gi|344249399|gb|EGW05503.1| putative ATP-dependent RNA helicase DDX27 [Cricetulus griseus]
Length = 486
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 48/309 (15%)
Query: 163 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 222
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 27 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI------- 79
Query: 223 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 282
IR C R M+ SAT+T + LA + L
Sbjct: 80 ---------------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSL 108
Query: 283 HHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTH 340
+P+ + P + + I ++ + + ALL + ++FT + + H
Sbjct: 109 KNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAH 168
Query: 341 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 400
R+ LL L +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV
Sbjct: 169 RMHILLG---LLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 225
Query: 401 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--I 458
V+N+ P +K Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + I
Sbjct: 226 VINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARII 282
Query: 459 PSSLIESLR 467
P +I R
Sbjct: 283 PQDVILKFR 291
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 168/344 (48%), Gaps = 65/344 (18%)
Query: 135 IADEISELIKR----PKLEAGICYDPEDV---LQELQSAVDILVATPGRLMDHINATRGF 187
+AD++ E +KR L + + + D+ + L+ ++LVATPGRL+DH+ +
Sbjct: 106 LADQVYESVKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVE-QKNV 164
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L + LV+DE DR+L +LP + ++ R LP+ +R
Sbjct: 165 NLSQVGILVLDEADRMLD---MGFLPDLERIIR------------LLPA--------QRQ 201
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGETRYKLPERL 301
G ++ SAT + + KL + L+HP+ + T T ++
Sbjct: 202 G---------------LLFSATFSNEIRKLGRSYLNHPVEIEVAARNATANTITQI---- 242
Query: 302 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 361
+YK+ + K +V L++S G ++ IVF+++ T RL L G +K + G
Sbjct: 243 -AYKMSGDQKRA--AVVHLVKSRGLKQVIVFSNTKIGTARLARELERDG---VKAESIHG 296
Query: 362 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 421
+ Q+ R K L+AF+ G+++VLV++D RG+DV GV V+NYD P + Y+HR GRT
Sbjct: 297 DKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTG 356
Query: 422 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 463
RAG G L DE +RF ++K P + +P+ L+
Sbjct: 357 RAGATGEAIALFTADE-ERFLLDIEKLIKREVPRGTLDVPAELV 399
>gi|416896375|ref|ZP_11926222.1| putative ATP-dependent RNA helicase rhlE [Escherichia coli STEC_7v]
gi|417118486|ref|ZP_11969004.1| ATP-dependent RNA helicase RhlE [Escherichia coli 1.2741]
gi|422800154|ref|ZP_16848652.1| DEAD/DEAH box helicase [Escherichia coli M863]
gi|323967399|gb|EGB62820.1| DEAD/DEAH box helicase [Escherichia coli M863]
gi|327253583|gb|EGE65212.1| putative ATP-dependent RNA helicase rhlE [Escherichia coli STEC_7v]
gi|386138020|gb|EIG79180.1| ATP-dependent RNA helicase RhlE [Escherichia coli 1.2741]
Length = 454
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 187/446 (41%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR-----AVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT + LP++Q L R R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA Q+ Y NI L+ VF +
Sbjct: 87 LAAQIGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ DVL VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DVL----------VATPGRLLDLEHQNAV 145
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+ L+ + LV+DE DR+L G + I
Sbjct: 146 K---LDQIEILVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR P R ++ SAT + D LA+ LH+PL + R E++ +
Sbjct: 171 RRV-----LTKLPAKRQ-NLLFSATFSDDIKNLAEKLLHNPLEIEVAR-RNTASEQVTQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L ++ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G I+VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ +KLL+K
Sbjct: 341 ATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|323491504|ref|ZP_08096686.1| ATP-dependent RNA helicase SrmB [Vibrio brasiliensis LMG 20546]
gi|323314258|gb|EGA67340.1| ATP-dependent RNA helicase SrmB [Vibrio brasiliensis LMG 20546]
Length = 411
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 198/465 (42%), Gaps = 115/465 (24%)
Query: 8 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLP 64
P Q+ E I L RD+ ++PTG+GKT ++ALP +Q L + R R L++ P
Sbjct: 26 PTQIQA--EAIPQALDGRDVLASAPTGTGKTAAFALPALQFLQDFPRRKPGPARVLILTP 83
Query: 65 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 124
TR+LA+ QV D A+A L
Sbjct: 84 TRELAM---------------------------------------QVADQARALAKHTNL 104
Query: 125 SVGLAVGQSSIADEISELIKRPKLEAGICYDPE-DVLQELQSAVDILVATPGRLMDHINA 183
++ G G+ Y D+L Q DI+VATPGRLM++I A
Sbjct: 105 NIFTITG-------------------GVQYQEHADILATTQ---DIVVATPGRLMEYIEA 142
Query: 184 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 243
R F + +L++DE DR+L + PTV +L+ +E R+ T L SA T
Sbjct: 143 ER-FDCRAIEWLILDEADRMLDMGFG---PTVDRLS---SECRWR-KQTLLFSA-----T 189
Query: 244 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES 303
+ GVE GF +A L +DP A++D E + +++
Sbjct: 190 LEGKGVE-GF-------------TADLLKDP---AEID---------AEPSRRERKKIAQ 223
Query: 304 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 363
+ + L L+ + + E+ IVF + E RL L + +I G
Sbjct: 224 WYHRADDMTHKLELLKKILTEQAERSIVFLKTRE---RLAELRTELEKAQIPCAWIQGEM 280
Query: 364 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 423
Q R+ + FR+G + VL+++D RG+D+ V++V+NYD P Y+HR GRTARA
Sbjct: 281 PQDRRNNAIARFRDGTVNVLLATDVAARGIDLPDVSHVINYDMPRSADVYLHRIGRTARA 340
Query: 424 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRP 468
G+ G +L+ + ++ + D I I+ +RP
Sbjct: 341 GKKGNAVSLVEAHDQPMIDRVARYVKED------IKERFIKEMRP 379
>gi|336375445|gb|EGO03781.1| hypothetical protein SERLA73DRAFT_46424 [Serpula lacrymans var.
lacrymans S7.3]
Length = 615
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 219/494 (44%), Gaps = 77/494 (15%)
Query: 2 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-------SNRAV 54
G ++ P+Q +++ + RD+ + TGSGKTL+Y LPI+ L S++
Sbjct: 51 GFTTPTPIQ----SKSLPKAMEGRDIVGVAETGSGKTLAYGLPILHHLLSRSRHPSSKVK 106
Query: 55 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 114
R ++ALV+ PTR+LALQV S ++I I + ++ + L S + K+V
Sbjct: 107 RQVQALVLAPTRELALQV-SDHLNMFARSIEAPIKEETLDVELSETQQLKDKS--KGKNV 163
Query: 115 FAAIAPAVG----LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 170
+ A +S+ VG S A + +I R VDIL
Sbjct: 164 VSGTAKTFSKPPLVSIAAIVGGMS-AQKQRRIIDR--------------------GVDIL 202
Query: 171 VATPGRLMDHINATRGFT--LEHLCYLVVDETDRLLREAYQAWLPTVLQLT--------R 220
+ATPGRL D + L L YL++DE DR++ + A L +L+LT
Sbjct: 203 IATPGRLWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSRFFET 262
Query: 221 SDNE----NRFSDA-STFLPSAFGS------LKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
D E DA TF+ SA S LK R + + + KP L +VL
Sbjct: 263 QDTEVQAHAETEDALQTFVFSATLSKDLQRDLKKGYRPRIGKKGRSKPASTLEDLVLRLD 322
Query: 270 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA-LLQSLGEEK 328
+D N +D+ + +G L+ K+ C S K +YL LL+ G +
Sbjct: 323 F-RDANPEV-IDISPEGGVVSG---------LQESKIECLSADKDIYLYYFLLRYPG--R 369
Query: 329 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
+VF SS++ RL L++ L +K+ Q R K L F+ VL+++D
Sbjct: 370 SLVFLSSIDGIRRLTPLMD---LLNVKVFPLHSQLEQRQRLKNLDRFKSTPNSVLLATDI 426
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 448
RG+D+ V++V++Y P T+IHR GRTARA + G + DE + K LL
Sbjct: 427 AARGLDIPAVDHVIHYQIPRSADTFIHRNGRTARAMRKGFSLLMCAPDERRVVKALLLSL 486
Query: 449 DNDSCPIHSIPSSL 462
D I I L
Sbjct: 487 GRDDADIPEISVEL 500
>gi|336326255|ref|YP_004606221.1| ATP-dependent RNA helicase [Corynebacterium resistens DSM 45100]
gi|336102237|gb|AEI10057.1| ATP-dependent RNA helicase [Corynebacterium resistens DSM 45100]
Length = 420
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 191/448 (42%), Gaps = 109/448 (24%)
Query: 22 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-----RCLRALVVLPTRDLALQVNSAR 76
L +DL + TG GKT + +P++ + + A RALV++PTR+L +QV
Sbjct: 42 LAGKDLIGQARTGMGKTYGFGIPLLDRVFDDAHVTPPDGSPRALVIVPTRELCIQVAD-- 99
Query: 77 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 136
D +IA QF LP++ +V A
Sbjct: 100 -------------DLTIA---AQF-------LPEI-NVLA-------------------- 115
Query: 137 DEISELIKRPKLEAGICYDPEDVLQELQSA-VDILVATPGRLMDHINATRGFTLEHLCYL 195
L G+ ++ + +Q+LQ D+LV TPGRL+D ++ LE++ +
Sbjct: 116 -----------LYGGVKFETQ--IQQLQQGHSDVLVGTPGRLLD-LHRRGELVLENVEIV 161
Query: 196 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 255
V+DE D +L Q +L V L +ENR
Sbjct: 162 VLDEADEMLD---QGFLDDVQALIAETSENR----------------------------- 189
Query: 256 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 315
M+ SAT+ L++ + HP+ + + + + + KL +
Sbjct: 190 ------QMMLFSATMPGPIMALSRTFMRHPVQIRADQAQSQQTHATTTQLAFQSHKLDRM 243
Query: 316 YLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 374
+A +LQ+ G + +VFT + + + + L GEL G RQ R + L+A
Sbjct: 244 SALARILQTPGRGRTMVFTRTKKQAAFVASDL---GELGFAAGAVHGDMRQHERQQCLEA 300
Query: 375 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 434
FREG + VLV++D RG+DVE V +V+NY P + Y+HR GRT RAG G TL+
Sbjct: 301 FREGTVDVLVATDVAARGIDVEDVTHVINYQCPDDDRAYVHRIGRTGRAGHTGMAVTLVG 360
Query: 435 KDEVKRFKKLLQKADND-SCPIHSIPSS 461
DEV RF L + + D S P SS
Sbjct: 361 WDEVDRFNALCETLNLDLSNPPQWFSSS 388
>gi|161504014|ref|YP_001571126.1| ATP-dependent RNA helicase RhlE [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160865361|gb|ABX21984.1| hypothetical protein SARI_02107 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 455
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 188/446 (42%), Gaps = 117/446 (26%)
Query: 13 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 67
+ Q+ I L RDL ++ TG+GKT + LP++Q L + R +RAL++ PTR+
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITHQPHAKGRRPVRALILTPTRE 86
Query: 68 LALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 126
LA Q+ Y NI L+ VF +
Sbjct: 87 LAAQIGENVRDYSKYLNIRSLV-------------------------VFGGV-------- 113
Query: 127 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINAT 184
SI ++ KL G+ DVL VATPGRL+D H NA
Sbjct: 114 -------SINPQMM------KLRGGV-----DVL----------VATPGRLLDLEHQNAV 145
Query: 185 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 244
+ L+ + LV+DE DR+L G + I
Sbjct: 146 K---LDQIEILVLDEADRML--------------------------------DMGFIHDI 170
Query: 245 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 304
RR K P+ ++ SAT + D LA+ LH+PL + R E++ +
Sbjct: 171 RRVLA------KLPPKRQNLLFSATFSDDIKALAEKLLHNPLEIEVAR-RNTASEQVTQH 223
Query: 305 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 364
+ K K L L+ ++ +VFT + + L LN G I+ G +
Sbjct: 224 VHFVDKKRKRELLSLLIGQGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKS 280
Query: 365 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 424
Q R++ L F+ G ++VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA
Sbjct: 281 QGARTRALADFKSGDLRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAA 340
Query: 425 QLGRCFTLLHKDE---VKRFKKLLQK 447
G +L+ DE ++ +KLL+K
Sbjct: 341 ATGEALSLVCIDEHKLLRDIEKLLKK 366
>gi|83945168|ref|ZP_00957517.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Oceanicaulis sp. HTCC2633]
gi|83851338|gb|EAP89194.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Oceanicaulis sp. HTCC2633]
Length = 466
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 150 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 209
G+ P+ ++ L VDILVATPGRL+DH+ R L+ ++++DE D++L +
Sbjct: 128 GGVKAGPQ--IKALARGVDILVATPGRLLDHLG-ERKARLDLTRFVILDEADQMLDLGF- 183
Query: 210 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 269
+P + +L R E R + ++ SAT
Sbjct: 184 --IPAIRKLLRMVGEERQT-----------------------------------LMFSAT 206
Query: 270 LTQDPNKLAQLDLHHPLFLTTGETRYKLP-ERLESYKLICESKLKPLYLVALLQSLGEEK 328
+ +LA L HP T T P ER++ E+ KP L+ L+ ++
Sbjct: 207 MAPAIRQLADDFLDHPE--TVAVTPPSKPVERIDQKVFYTEASAKPDALIDLMAPEAGKR 264
Query: 329 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 388
I+FT + R+ L +G K G + Q+ R++ L AF+ G+ VLV++D
Sbjct: 265 AIIFTRTKYGADRVAKRLVKYGH---KANAIHGDKSQNQRTRALDAFKSGEAPVLVATDI 321
Query: 389 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 437
RG+DV+GV+ VVNY+ P + Y+HR GRTARAG GR L DE
Sbjct: 322 AARGIDVDGVDLVVNYELPNVAENYVHRIGRTARAGASGRAVALCAPDE 370
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 26 DLCINSPTGSGKTLSYALPIVQTL--SNRAV--RCLRALVVLPTRDLALQVN------SA 75
DL + TG+GKT ++ LP+V L N+ R RAL++ PTR+LA Q+ +A
Sbjct: 58 DLIGLAQTGTGKTAAFVLPLVHQLLAENKQAPGRSCRALILAPTRELAAQIEEQVKAYTA 117
Query: 76 RCKYCCKNIFG 86
K +FG
Sbjct: 118 HTKLTSTVVFG 128
>gi|421486785|ref|ZP_15934320.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
gi|400194954|gb|EJO27955.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
Length = 497
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 57/325 (17%)
Query: 135 IADEISELIKR----PKLEAGICYDPEDV---LQELQSAVDILVATPGRLMDHINATRGF 187
+AD++ E +KR L + + + D+ + L+ ++LVATPGRL+DH+ +
Sbjct: 105 LADQVYESVKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVE-QKNV 163
Query: 188 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 247
L + LV+DE DR+L +LP + ++ R LP+ +R
Sbjct: 164 NLSQVGILVLDEADRMLD---MGFLPDLERIIR------------LLPT--------QRQ 200
Query: 248 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE-SYKL 306
G ++ SAT + + KL + L+HP+ + + +YK+
Sbjct: 201 G---------------LLFSATFSNEIRKLGRSYLNHPVEIEVAARNATATTITQIAYKM 245
Query: 307 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 366
++K +V L++S G ++ IVF+++ T RL L G +K + G + Q+
Sbjct: 246 SGDAKRA--AVVHLVKSRGLKQVIVFSNTKIGTARLARELERDG---VKAESIHGDKTQA 300
Query: 367 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 426
R K L+AF+ G+++VLV++D RG+DV GV V+NYD P + Y+HR GRT RAG
Sbjct: 301 DRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGAS 360
Query: 427 GRCFTLLHKDEVKRF----KKLLQK 447
G L DE +RF +KL+++
Sbjct: 361 GEAIALFTPDE-ERFLLDIEKLIKR 384
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,989,923,895
Number of Sequences: 23463169
Number of extensions: 279425713
Number of successful extensions: 823586
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 28824
Number of HSP's successfully gapped in prelim test: 4139
Number of HSP's that attempted gapping in prelim test: 706078
Number of HSP's gapped (non-prelim): 89724
length of query: 475
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 329
effective length of database: 8,933,572,693
effective search space: 2939145415997
effective search space used: 2939145415997
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)