Query 011892
Match_columns 475
No_of_seqs 219 out of 1457
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 17:26:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vn1_A 70 kDa peptidylprolyl i 99.9 2.6E-24 8.7E-29 188.9 13.5 123 352-475 2-127 (129)
2 3kz7_A FK506-binding protein 3 99.9 3.3E-24 1.1E-28 185.0 13.2 109 363-474 2-119 (119)
3 1yat_A FK506 binding protein; 99.9 4.2E-24 1.5E-28 183.1 13.7 110 361-474 2-113 (113)
4 2y78_A Peptidyl-prolyl CIS-tra 99.9 5.4E-24 1.8E-28 189.2 14.8 119 351-473 14-133 (133)
5 4dip_A Peptidyl-prolyl CIS-tra 99.9 3.5E-24 1.2E-28 186.9 13.1 116 358-475 5-123 (125)
6 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.9E-24 9.8E-29 206.8 13.2 118 350-475 102-219 (219)
7 1jvw_A Macrophage infectivity 99.9 3E-24 1E-28 198.5 10.8 118 352-475 24-143 (167)
8 1fd9_A Protein (macrophage inf 99.9 1.4E-23 4.8E-28 201.0 13.0 119 351-475 92-211 (213)
9 2f4e_A ATFKBP42; FKBP-like, al 99.9 4.2E-23 1.4E-27 192.4 15.0 117 356-475 40-160 (180)
10 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2.4E-23 8.1E-28 183.0 12.3 109 362-474 16-126 (128)
11 2ppn_A FK506-binding protein 1 99.9 2.5E-23 8.7E-28 176.1 12.0 105 366-474 1-107 (107)
12 3o5e_A Peptidyl-prolyl CIS-tra 99.9 2.5E-23 8.5E-28 186.9 12.6 108 363-474 33-142 (144)
13 2jwx_A FKBP38NTD, FK506-bindin 99.9 3E-23 1E-27 190.1 13.3 118 350-474 19-148 (157)
14 2lgo_A FKBP; infectious diseas 99.9 3.5E-23 1.2E-27 183.1 12.3 114 356-473 13-130 (130)
15 3uf8_A Ubiquitin-like protein 99.9 6E-23 2.1E-27 195.5 13.8 112 358-473 97-209 (209)
16 2awg_A 38 kDa FK-506 binding p 99.9 7.2E-23 2.4E-27 177.2 12.9 111 357-474 4-117 (118)
17 3b7x_A FK506-binding protein 6 99.9 1.3E-23 4.5E-28 186.4 8.5 117 355-474 16-133 (134)
18 1q6h_A FKBP-type peptidyl-prol 99.9 9.8E-23 3.3E-27 196.6 13.3 118 350-474 106-224 (224)
19 1u79_A FKBP-type peptidyl-prol 99.9 3.5E-23 1.2E-27 182.1 9.0 113 357-473 4-128 (129)
20 1r9h_A FKB-6, FK506 binding pr 99.9 1.2E-22 4E-27 180.5 12.2 109 363-475 12-122 (135)
21 2d9f_A FK506-binding protein 8 99.9 2.1E-22 7.1E-27 178.9 11.1 114 355-475 6-123 (135)
22 2lkn_A AH receptor-interacting 99.9 2.3E-22 7.9E-27 186.1 7.3 87 361-449 6-96 (165)
23 2pbc_A FK506-binding protein 2 99.8 4.1E-21 1.4E-25 161.5 10.3 96 378-475 2-98 (102)
24 1q1c_A FK506-binding protein 4 99.8 4.5E-20 1.5E-24 182.5 15.4 108 363-474 49-158 (280)
25 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 6.1E-20 2.1E-24 188.8 10.2 108 363-474 29-138 (457)
26 2if4_A ATFKBP42; FKBP-like, al 99.8 1.6E-19 5.6E-24 178.4 11.2 114 358-474 42-159 (338)
27 3jxv_A 70 kDa peptidyl-prolyl 99.8 9.9E-21 3.4E-25 191.9 0.1 112 359-474 5-118 (356)
28 3jxv_A 70 kDa peptidyl-prolyl 99.8 2.3E-18 7.9E-23 174.5 13.7 110 363-475 242-355 (356)
29 1q1c_A FK506-binding protein 4 99.7 2.5E-17 8.6E-22 162.9 13.1 105 363-475 166-274 (280)
30 2k8i_A SLYD, peptidyl-prolyl C 99.6 4.4E-15 1.5E-19 137.8 12.5 73 380-453 1-73 (171)
31 1hxv_A Trigger factor; FKBP fo 99.6 2.5E-15 8.4E-20 130.4 8.1 87 379-474 27-113 (113)
32 2kr7_A FKBP-type peptidyl-prol 99.6 5.7E-15 2E-19 134.0 10.8 73 380-453 5-78 (151)
33 4dt4_A FKBP-type 16 kDa peptid 99.6 2.3E-15 7.8E-20 139.7 8.0 72 381-453 24-96 (169)
34 2kfw_A FKBP-type peptidyl-prol 99.6 6.6E-15 2.2E-19 139.5 11.0 73 380-453 1-73 (196)
35 3pr9_A FKBP-type peptidyl-prol 99.6 3.9E-15 1.3E-19 136.5 8.1 71 381-453 1-85 (157)
36 1p5q_A FKBP52, FK506-binding p 99.6 3.1E-14 1E-18 140.3 14.2 108 360-475 20-131 (336)
37 1ix5_A FKBP; ppiase, isomerase 99.5 5.3E-15 1.8E-19 134.3 6.0 72 382-454 2-87 (151)
38 3prb_A FKBP-type peptidyl-prol 99.5 2.3E-14 7.9E-19 139.0 10.6 70 382-453 2-85 (231)
39 3cgm_A SLYD, peptidyl-prolyl C 99.4 3.7E-13 1.3E-17 123.3 8.5 67 381-453 2-68 (158)
40 1w26_A Trigger factor, TF; cha 99.3 4.3E-12 1.5E-16 132.4 9.5 88 379-475 155-242 (432)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 2E-10 6.9E-15 118.0 12.8 104 364-474 145-251 (457)
42 1t11_A Trigger factor, TF; hel 99.1 2.4E-11 8.3E-16 125.3 4.2 86 381-475 160-245 (392)
43 3gty_X Trigger factor, TF; cha 97.8 3E-05 1E-09 81.0 6.9 73 381-474 154-226 (433)
44 2p4v_A Transcription elongatio 38.1 84 0.0029 28.1 7.3 25 420-444 119-143 (158)
45 3htx_A HEN1; HEN1, small RNA m 27.0 1.1E+02 0.0036 35.3 7.2 59 381-442 560-649 (950)
46 3bmb_A Regulator of nucleoside 21.2 1.6E+02 0.0053 25.5 5.8 24 421-444 90-113 (136)
No 1
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.91 E-value=2.6e-24 Score=188.93 Aligned_cols=123 Identities=33% Similarity=0.574 Sum_probs=107.7
Q ss_pred ccccccCCeeeCCCCeEE-EEEeec-CCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHH
Q 011892 352 SAEGKLSLLRTLPNGLVI-QKLGTG-KPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVG 428 (475)
Q Consensus 352 ~~~~k~~~v~ttpSGl~y-kILkeG-kgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeA 428 (475)
+.+.+..++.++++|+.| +++++| .++|..|..||.|+|||+++++.+|++|++++.+ .|+.|.+|.+.+|+||+++
T Consensus 2 ~~~~~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~ 81 (129)
T 2vn1_A 2 TTEQEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDIC 81 (129)
T ss_dssp -----CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHH
T ss_pred CcccccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHH
Confidence 356777888899999665 689976 4468999999999999999986799999999864 8999999999999999999
Q ss_pred HcCCccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 429 LEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 429 L~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
|.+|++|++++|+|||.+|||..+.++. |||+++|+|+|+|++|++
T Consensus 82 l~gm~~Ge~~~v~ip~~~aYG~~~~~~~-Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 82 VSSMRKNEKCLVRIESMYGYGDEGCGES-IPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp HTTCCTTCEEEEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEEC
T ss_pred HhCCCCCCEEEEEEChHHcCCCCCCCCC-cCCCCeEEEEEEEEEEec
Confidence 9999999999999999999999988776 999999999999999974
No 2
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=3.3e-24 Score=185.00 Aligned_cols=109 Identities=38% Similarity=0.633 Sum_probs=100.9
Q ss_pred CCCCeEEEEEeecCCCCC-CCCCCCEEEEEEEEEEccCCeEEeccCC--------CCCeEEecCCcchhhcHHHHHcCCc
Q 011892 363 LPNGLVIQKLGTGKPDGK-VAAPGKKISVLYTGKLKENGQVFDSNLG--------STPLKFHLGGKEVIEGLNVGLEGMH 433 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG~-~p~~GD~VtVhYtg~l~~DGkVfDST~~--------~~P~~f~LG~g~lIpGLEeAL~GMk 433 (475)
.|+|++|+|+++| +|. .|..||.|+|||++++ .+|++|++++. ..|+.|.+|.+.+|+||+++|.+|+
T Consensus 2 ~p~g~~~~il~~G--~g~~~p~~gd~V~v~Y~g~~-~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~ 78 (119)
T 3kz7_A 2 GPPKYTKSILKKG--DKTNFPKKGDVVHCWYTGTL-PDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMS 78 (119)
T ss_dssp CSCSEEEEEEECC--CSSCCCCTTCEEEEEEEEEC-TTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCC
T ss_pred CCCccEEEEEEcC--CCCCcCCCCCEEEEEEEEEE-CCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCC
Confidence 6899999999999 564 6999999999999998 89999999985 2799999999999999999999999
Q ss_pred cCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 434 VGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 434 vGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|++++|+|||.+|||..+.++..|||+++|+|+|+|++|.
T Consensus 79 ~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 79 KGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp TTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred CCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 99999999999999999988753499999999999999984
No 3
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.91 E-value=4.2e-24 Score=183.06 Aligned_cols=110 Identities=41% Similarity=0.738 Sum_probs=103.6
Q ss_pred eeCCCCeEEEEEeecCCCCCC-CCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEE
Q 011892 361 RTLPNGLVIQKLGTGKPDGKV-AAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKR 438 (475)
Q Consensus 361 ~ttpSGl~ykILkeGkgtG~~-p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~ 438 (475)
..+++|++|+++++| +|.. |..||.|+|||++++ .+|++|++++.+ .|+.|.+|.+.+++||++||.+|++|+++
T Consensus 2 ~~~~~g~~~~~~~~G--~g~~~~~~gd~V~v~y~~~~-~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 78 (113)
T 1yat_A 2 EVIEGNVKIDRISPG--DGATFPKTGDLVTIHYTGTL-ENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKA 78 (113)
T ss_dssp EECGGGCEEEEEECC--CSSCCCCTTCEEEEEEEEEE-TTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEE
T ss_pred CCCCCCeEEEEEECC--CCcccCCCCCEEEEEEEEEE-CCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEE
Confidence 467899999999999 6887 999999999999998 899999999875 79999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 439 RLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 439 ~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|+|||.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 79 ~v~ip~~~ayG~~~~~~~-Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 79 RLTIPGPYAYGPRGFPGL-IPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEC
T ss_pred EEEECHHHCcCCCCCCCC-cCCCCeEEEEEEEEEeC
Confidence 999999999999998776 99999999999999985
No 4
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.91 E-value=5.4e-24 Score=189.24 Aligned_cols=119 Identities=44% Similarity=0.727 Sum_probs=111.7
Q ss_pred cccccccCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHH
Q 011892 351 SSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGL 429 (475)
Q Consensus 351 ~~~~~k~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL 429 (475)
...+.....+.++++|++|+++++| +|..|..||.|+|||++++ .+|++|++++.. .|+.|.+|.+.+|+||+++|
T Consensus 14 ~~~~~~~~~~~~~~~gl~~~~l~~G--~G~~~~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL 90 (133)
T 2y78_A 14 LVPRGSHMTVVTTESGLKYEDLTEG--SGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGV 90 (133)
T ss_dssp SGGGTTTTCCEECTTSCEEEEEECC--SSCBCCTTSEEEEEEEEEE-TTSCEEEETTTTTCCEEEETTSSSSCHHHHHHS
T ss_pred ceecccCCCcEECCCCEEEEEEEcC--CCCCCCCCCEEEEEEEEEE-CCCCEEeccCcCCCCEEEEeCCCChhHHHHHHH
Confidence 3567788889999999999999999 6899999999999999998 899999999865 89999999999999999999
Q ss_pred cCCccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 011892 430 EGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 473 (475)
Q Consensus 430 ~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~V 473 (475)
.+|++|++++|+|||.+|||..+.++. |||+++|+|+|+|++|
T Consensus 91 ~gmk~Ge~~~v~ip~~~aYG~~~~~~~-Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 91 QGMKVGGVRRLTIPPQLGYGARGAGGV-IPPNATLVFEVELLDV 133 (133)
T ss_dssp TTCBTTCEEEEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEC
T ss_pred cCCCCCCEEEEEECcHHhCCCCCCCCC-CCCCCeEEEEEEEEEC
Confidence 999999999999999999999998766 9999999999999986
No 5
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.91 E-value=3.5e-24 Score=186.88 Aligned_cols=116 Identities=36% Similarity=0.594 Sum_probs=106.7
Q ss_pred CCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccC---CCCCeEEecCCcchhhcHHHHHcCCcc
Q 011892 358 SLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNL---GSTPLKFHLGGKEVIEGLNVGLEGMHV 434 (475)
Q Consensus 358 ~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~---~~~P~~f~LG~g~lIpGLEeAL~GMkv 434 (475)
.++.++++|++|+++++|.++|..|..||.|+|||+++++.+|++|++++ ...|+.|.+|.+.+|+||+++|.+|++
T Consensus 5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~ 84 (125)
T 4dip_A 5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCV 84 (125)
T ss_dssp CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCT
T ss_pred CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCC
Confidence 56778899999999999965589999999999999999933999999997 348999999999999999999999999
Q ss_pred CcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 435 GEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 435 GEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
|++++|+|||.+|||..+.+. |||+++|+|+|+|++|++
T Consensus 85 Ge~~~~~ip~~~aYG~~g~~~--Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 85 GEKRKLIIPPALGYGKEGKGK--IPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp TCEEEEEECGGGTTTTTCBTT--BCTTCCEEEEEEEEEEEC
T ss_pred CCEEEEEEChHHhcCCCCCCC--CCCCCeEEEEEEEEEEEc
Confidence 999999999999999999763 999999999999999974
No 6
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.91 E-value=2.9e-24 Score=206.83 Aligned_cols=118 Identities=31% Similarity=0.611 Sum_probs=110.9
Q ss_pred ccccccccCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHH
Q 011892 350 NSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGL 429 (475)
Q Consensus 350 ~~~~~~k~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL 429 (475)
-.+++++.++++++++|++|+++++| +|..|..||.|+|||++++ .||++|+++ ..|+.|.+| .+|+||+++|
T Consensus 102 fl~~n~~~~gv~~~~sGl~y~vl~~G--~G~~p~~gd~V~V~Y~g~l-~dG~vfDss--~~P~~f~lG--~vI~G~eeaL 174 (219)
T 3oe2_A 102 FMAGEKAKPGVKELADGILMTELTPG--TGPKPDANGRVEVRYVGRL-PDGKIFDQS--TQPQWFRLD--SVISGWTSAL 174 (219)
T ss_dssp HHHHHHTSTTCEECGGGCEEEEEECC--CSCCCCTTSEEEEEEEEEC-TTSCEEEEC--SSCEEEEGG--GSCHHHHHHH
T ss_pred HHHHhccCCCcEECCCCeEEEEEecC--CCccCCCCCEEEEEEEEEE-CCCCEeecc--CCcEEEEec--chhHHHHHHH
Confidence 34477888999999999999999999 6899999999999999998 899999998 589999998 8999999999
Q ss_pred cCCccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 430 EGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 430 ~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
.+|++|++++|+|||.+|||..|.++. |||+++|+|+|+|++|++
T Consensus 175 ~gMk~Gek~~v~IPp~lAYG~~g~~~~-IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 175 QNMPTGAKWRLVIPSDQAYGAEGAGDL-IDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEEC
T ss_pred hCCCCCCEEEEEECchhcCCCCCCCCC-CCCCCeEEEEEEEEEEeC
Confidence 999999999999999999999998876 999999999999999975
No 7
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.90 E-value=3e-24 Score=198.50 Aligned_cols=118 Identities=42% Similarity=0.686 Sum_probs=109.1
Q ss_pred ccccccCCeeeCCCCeEEEEEeecCCCCCC-CCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHH
Q 011892 352 SAEGKLSLLRTLPNGLVIQKLGTGKPDGKV-AAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGL 429 (475)
Q Consensus 352 ~~~~k~~~v~ttpSGl~ykILkeGkgtG~~-p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL 429 (475)
+++++..++.++++|++|+++++| +|.. |..||.|+|||++++ .+|++|++++.+ .|+.|.+| .+|+||+++|
T Consensus 24 ~~~~~~~~~~~~~sGl~~~vl~~G--~G~~~~~~gd~V~v~Y~g~l-~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL 98 (167)
T 1jvw_A 24 EQKAAQPDAVKLPSGLVFQRIARG--SGKRAPAIDDKCEVHYTGRL-RDGTVFDSSRERGKPTTFRPN--EVIKGWTEAL 98 (167)
T ss_dssp HHHHHSTTEEECTTSCEEEEEECC--CCSBCCCTTCCEEEEEEEEC-TTSCEEEEHHHHTSCEEECGG--GSCHHHHHHH
T ss_pred HhcccCCCcEECCCCEEEEEEEcC--CCCcCCCCCCEEEEEEEEEE-CCCCEEeeccccCCCEEEEeC--chhHHHHHHH
Confidence 456778899999999999999999 6888 999999999999998 899999999754 79999995 8999999999
Q ss_pred cCCccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 430 EGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 430 ~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
.+|++|++++|+|||.+|||..+.++. ||||++|+|+|+|++|++
T Consensus 99 ~gMk~Ge~~~~~Ip~~laYG~~g~~~~-Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 99 QLMREGDRWRLFIPYDLAYGVTGGGGM-IPPYSPLEFDVELISIKD 143 (167)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCSSSS-SCTTCCEEEEEEEEEEGG
T ss_pred cCCCCCCEEEEEECchhhCCCCCCCCC-cCCCCeEEEEEEEEEEEc
Confidence 999999999999999999999998766 999999999999999863
No 8
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.90 E-value=1.4e-23 Score=200.97 Aligned_cols=119 Identities=29% Similarity=0.519 Sum_probs=110.3
Q ss_pred cccccccCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHH
Q 011892 351 SSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGL 429 (475)
Q Consensus 351 ~~~~~k~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL 429 (475)
.+++++..+++++++|++|+++++| +|..|..||.|+|||++++ .+|++|++++.+ .|+.|.+| .+|+||+++|
T Consensus 92 l~~~~~~~~v~~~~sGl~y~vl~~G--~G~~p~~gD~V~V~Y~g~l-~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL 166 (213)
T 1fd9_A 92 LTENKNKPGVVVLPSGLQYKVINSG--NGVKPGKSDTVTVEYTGRL-IDGTVFDSTEKTGKPATFQVS--QVIPGWTEAL 166 (213)
T ss_dssp HHHHHHSTTEEECTTSCEEEEEECC--CSCCCCTTCEEEEEEEEEE-TTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHH
T ss_pred HHHhcccCCcEECCCccEEEEEecC--CCccCCCCCEEEEEEEEEE-CCCCEEeeccccCCCEEEEcC--chhhHHHHHH
Confidence 3467778899999999999999999 7899999999999999999 799999999864 79999995 8999999999
Q ss_pred cCCccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 430 EGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 430 ~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
.+|++|++++|+|||.++||..+.++. |||+++|+|+|+|++|++
T Consensus 167 ~gMk~Gek~~v~IP~~laYG~~g~~~~-Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 167 QLMPAGSTWEIYVPSGLAYGPRSVGGP-IGPNETLIFKIHLISVKK 211 (213)
T ss_dssp TTCCTTCEEEEEECGGGTTTTCCCSSS-CCTTCCEEEEEEEEEEEC
T ss_pred cCCCCCCEEEEEECchhccCccCCCCC-CCCCCeEEEEEEEEEEEc
Confidence 999999999999999999999987665 999999999999999974
No 9
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=4.2e-23 Score=192.36 Aligned_cols=117 Identities=21% Similarity=0.378 Sum_probs=106.9
Q ss_pred ccCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCc-chhhcHHHHHcCCc
Q 011892 356 KLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGK-EVIEGLNVGLEGMH 433 (475)
Q Consensus 356 k~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g-~lIpGLEeAL~GMk 433 (475)
....++++++|++|+++++| +|..|..|+.|+|||+++++.+|++|++++.. .|+.|.||.+ .+|+||+++|.+|+
T Consensus 40 ~~~~~~~~~~gl~~~vl~~G--~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk 117 (180)
T 2f4e_A 40 VDSEAEVLDEKVSKQIIKEG--HGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMK 117 (180)
T ss_dssp CCSCCEEEETTEEEEEEECC--BSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCC
T ss_pred cCCCcEECCCceEEEEEeCC--CCCCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCC
Confidence 45578999999999999999 68999999999999999994469999999865 7999999999 99999999999999
Q ss_pred cCcEEEEEEcCCCCCCCCCC--CCCCCCCCCeEEEEEEEEeeeC
Q 011892 434 VGEKRRLLIPPSLGYGSGGD--DSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 434 vGEk~~ViIPp~LAYG~~G~--~~kgIPPnStLVFdVELL~VKk 475 (475)
+|++++|+|||.++||..+. .+. |||+++|+|+|+|++|++
T Consensus 118 ~Ge~~~v~iPp~~aYG~~g~~~~~~-Ip~~s~l~F~VeL~~v~~ 160 (180)
T 2f4e_A 118 SGERALVHVGWELAYGKEGNFSFPN-VPPMADLLYEVEVIGFDE 160 (180)
T ss_dssp BTCEEEEEECGGGTTTTTCBSSSSC-BCTTCCEEEEEEEEEESC
T ss_pred CCCEEEEEECchHhCCcCCcccCCC-cCCCCeEEEEEEEEEEec
Confidence 99999999999999999986 233 999999999999999863
No 10
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.89 E-value=2.4e-23 Score=182.99 Aligned_cols=109 Identities=35% Similarity=0.597 Sum_probs=101.8
Q ss_pred eCCCCeEEEEEeecCCCCC-CCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEE
Q 011892 362 TLPNGLVIQKLGTGKPDGK-VAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRR 439 (475)
Q Consensus 362 ttpSGl~ykILkeGkgtG~-~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ 439 (475)
..++|++|+++++| +|. .|..|+.|+|||++++ .+|++|++++.. .|+.|.+|.+++|+||+++|.+|++|++++
T Consensus 16 ~~d~gv~~~i~~~G--~G~~~p~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~ 92 (128)
T 3o5q_A 16 KKDRGVLKIVKRVG--NGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICH 92 (128)
T ss_dssp SCSSSEEEEEEECC--SSSCCCCTTCEEEEEEEEEE-TTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEE
T ss_pred cCCCCEEEEEEECC--CCCccCCCCCEEEEEEEEEE-CCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEE
Confidence 46789999999999 575 6899999999999999 799999998754 799999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 440 LLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 440 ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
|+|||.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 93 v~ip~~~aYG~~g~~~~-Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 93 LLCKPEYAYGSAGSLPK-IPSNATLFFEIELLDFK 126 (128)
T ss_dssp EEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred EEEChHHcCCCCCCCCC-cCCCCEEEEEEEEEEec
Confidence 99999999999998766 99999999999999986
No 11
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.89 E-value=2.5e-23 Score=176.12 Aligned_cols=105 Identities=41% Similarity=0.764 Sum_probs=98.7
Q ss_pred CeEEEEEeecCCCCCC-CCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEEEEc
Q 011892 366 GLVIQKLGTGKPDGKV-AAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIP 443 (475)
Q Consensus 366 Gl~ykILkeGkgtG~~-p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIP 443 (475)
|++|+++++| +|.. |..||.|+|||++++ .+|++|++++.. .|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 1 Gl~~~~~~~G--~g~~~~~~gd~V~v~y~~~~-~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip 77 (107)
T 2ppn_A 1 GVQVETISPG--DGRTFPKRGQTCVVHYTGML-EDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTIS 77 (107)
T ss_dssp CEEEEEEECC--CSSCCCCTTCEEEEEEEEEE-TTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CcEEEEEECc--CCCcCCCCCCEEEEEEEEEE-CCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEEC
Confidence 7999999999 6877 999999999999999 799999998754 7999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 444 PSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 444 p~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
|.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 78 ~~~ayG~~~~~~~-Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 78 PDYAYGATGHPGI-IPPHATLVFDVELLKLE 107 (107)
T ss_dssp GGGTTTTTCBTTT-BCTTCCEEEEEEEEEEC
T ss_pred HHHccCCCCCCCC-cCCCCeEEEEEEEEEeC
Confidence 9999999988776 99999999999999985
No 12
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.89 E-value=2.5e-23 Score=186.88 Aligned_cols=108 Identities=35% Similarity=0.602 Sum_probs=101.7
Q ss_pred CCCCeEEEEEeecCCCCC-CCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEE
Q 011892 363 LPNGLVIQKLGTGKPDGK-VAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRL 440 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG~-~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~V 440 (475)
.++|++|+++++| .|. .|..|+.|+|||++++ .+|++|++++.+ .|+.|.+|.+.+|+||+++|.+|++|++++|
T Consensus 33 ~d~gv~~~i~~~G--~G~~~p~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v 109 (144)
T 3o5e_A 33 KDRGVLKIVKRVG--NGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHL 109 (144)
T ss_dssp CSSSEEEEEEECC--BSSCCCCTTCEEEEEEEEEC-TTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEE
T ss_pred CCCeEEEEEEECC--CCCccCCCCCEEEEEEEEEE-CCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEE
Confidence 5789999999999 575 7999999999999998 799999999865 7999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 441 LIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 441 iIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|||.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 110 ~ipp~~aYG~~g~~~~-Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 110 LCKPEYAYGSAGSLPK-IPSNATLFFEIELLDFK 142 (144)
T ss_dssp EECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred EEChHHCcCCCCCCCC-cCCCCeEEEEEEEEEec
Confidence 9999999999998766 99999999999999986
No 13
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.89 E-value=3e-23 Score=190.13 Aligned_cols=118 Identities=28% Similarity=0.352 Sum_probs=107.2
Q ss_pred ccccccccCCee--------eCCCCe-EEEEEeecCCCCC--CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCC
Q 011892 350 NSSAEGKLSLLR--------TLPNGL-VIQKLGTGKPDGK--VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGG 418 (475)
Q Consensus 350 ~~~~~~k~~~v~--------ttpSGl-~ykILkeGkgtG~--~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~ 418 (475)
..+++++..++. ++++|+ +|+++++| +|. .|..||.|+|||++++ .+|++|+++ .|+.|.+|.
T Consensus 19 fl~~~~~~~gv~~~~~~~~~~~~sG~v~~~vl~~G--~G~~~~p~~gd~V~v~Y~g~l-~dG~~fds~---~p~~f~lG~ 92 (157)
T 2jwx_A 19 FLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPG--PPGSSRPVKGQVVTVHLQTSL-ENGTRVQEE---PELVFTLGD 92 (157)
T ss_dssp SCSCCSSCCCCCCCCCSCEESSSSSSEEEEEEECC--STTSCCCCTTEEEEEEEEEEC-TTSCEEEEE---EEEEEETTT
T ss_pred HHHHhccCCCccccccccceECCCCCEEEEEEEcc--CCCccCCCCCCEEEEEEEEEE-CCCCEeecC---CCEEEEeCC
Confidence 345667777777 999997 89999999 565 8999999999999998 899999985 799999999
Q ss_pred cchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCC-CCCCCCCCCCeEEEEEEEEeee
Q 011892 419 KEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGG-DDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 419 g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G-~~~kgIPPnStLVFdVELL~VK 474 (475)
+++|+||+++|.+|++|++++|+|||.+|||..+ .++. |||+++|+|+|+|++|+
T Consensus 93 g~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~~-IPp~stLiF~VeL~~i~ 148 (157)
T 2jwx_A 93 CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPY-IPPHAALCLEVTLKTAV 148 (157)
T ss_dssp TSSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSSC-CCTTCCEEEEEEEEEEE
T ss_pred CChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCCC-cCCCCeEEEEEEEEEEE
Confidence 9999999999999999999999999999999998 5555 99999999999999986
No 14
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.89 E-value=3.5e-23 Score=183.14 Aligned_cols=114 Identities=36% Similarity=0.617 Sum_probs=105.7
Q ss_pred ccCCeeeCCCCeEEE--EEeecCCCCCC-CCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcC
Q 011892 356 KLSLLRTLPNGLVIQ--KLGTGKPDGKV-AAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEG 431 (475)
Q Consensus 356 k~~~v~ttpSGl~yk--ILkeGkgtG~~-p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~G 431 (475)
....+.++++|++|+ ++++| +|.. |..||.|+|+|++++ .+|++|++++.. .|+.|.+|.+.+|+||+++|.+
T Consensus 13 ~~~~~~~~~~Gl~~~K~~l~~G--~G~~~~~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~g 89 (130)
T 2lgo_A 13 EAQTQGPGSMSAQLEKKVLTPG--DGVTKPQAGKKVTVHYDGRF-PDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVAT 89 (130)
T ss_dssp CCSSCSSSSSSCCCCEEEEECC--CSSCCCCTTSEEEEEEEEEC-TTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHH
T ss_pred ccccceeCCCceEEEEEEEecc--CCCccCCCCCEEEEEEEEEE-CCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhC
Confidence 345667789999999 99999 6887 999999999999998 899999999875 7999999999999999999999
Q ss_pred CccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 011892 432 MHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 473 (475)
Q Consensus 432 MkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~V 473 (475)
|++|++++|+|||.+|||..+.++. |||+++|+|+|+|++|
T Consensus 90 m~~Ge~~~v~ip~~~aYG~~~~~~~-Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 90 MTLGEKALFTIPYQLAYGERGYPPV-IPPKATLVFEVELLAV 130 (130)
T ss_dssp SCTTEEEEEEECTTTSTTTTCCSTT-SCSSCCEEEEEEEEEC
T ss_pred CCCCCEEEEEECcHHHCCCCCCCCC-cCCCCeEEEEEEEEEC
Confidence 9999999999999999999998776 9999999999999986
No 15
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.89 E-value=6e-23 Score=195.53 Aligned_cols=112 Identities=46% Similarity=0.774 Sum_probs=106.3
Q ss_pred CCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCc
Q 011892 358 SLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGE 436 (475)
Q Consensus 358 ~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGE 436 (475)
..+.++++|++|+++++| +|..|..|+.|+|||++++ .+|++|++++.. .|+.|.+|.+.+|+||++||.+|++|+
T Consensus 97 ~t~~~~~sGl~~~vl~~G--~G~~~~~gd~V~v~Y~g~l-~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge 173 (209)
T 3uf8_A 97 STVVTTESGLKYEDLTEG--SGAEARAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGG 173 (209)
T ss_dssp CCCEECTTSCEEEEEECC--CSCBCCTTCEEEEEEEEEE-TTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTC
T ss_pred ccccCCCCceEEEEEEcC--CCCcCCCCCEEEEEEEEEE-CCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCC
Confidence 348899999999999999 6999999999999999999 899999999865 799999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 011892 437 KRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 473 (475)
Q Consensus 437 k~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~V 473 (475)
+++|+|||.+|||..+.++. |||+++|+|+|+|++|
T Consensus 174 ~~~v~Ipp~~aYG~~g~~~~-IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 174 VRRLTIPPQLGYGARGAAGV-IPPNATLVFEVELLDV 209 (209)
T ss_dssp EEEEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEC
T ss_pred EEEEEECcHHhCCCCCCCCC-cCCCCeEEEEEEEEEC
Confidence 99999999999999998877 9999999999999986
No 16
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.89 E-value=7.2e-23 Score=177.15 Aligned_cols=111 Identities=30% Similarity=0.410 Sum_probs=102.8
Q ss_pred cCCeeeCCCC-eEEEEEeecCCCCC--CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCc
Q 011892 357 LSLLRTLPNG-LVIQKLGTGKPDGK--VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMH 433 (475)
Q Consensus 357 ~~~v~ttpSG-l~ykILkeGkgtG~--~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMk 433 (475)
..++.++++| ++|+++++| +|. .|..||.|+|||++++ .+|++|+++ .|+.|.+|.+.+++||+++|.+|+
T Consensus 4 ~~~~~~~~~g~~~~~vl~~G--~G~~~~~~~gd~V~v~y~g~~-~dG~~~ds~---~p~~f~lG~~~~i~g~e~~l~gm~ 77 (118)
T 2awg_A 4 EEWLDILGNGLLRKKTLVPG--PPGSSRPVKGQVVTVHLQTSL-ENGTRVQEE---PELVFTLGDCDVIQALDLSVPLMD 77 (118)
T ss_dssp TCEEESSSSSSEEEEEEECC--CTTCCCCCTTSEEEEEEEEEC-TTSCEEEEE---EEEEEETTSSCSCHHHHHHGGGSC
T ss_pred ccceEECCCCCEEEEEEEcC--CCCCccCCCCCEEEEEEEEEE-CCCCEEECC---CCEEEEECCCChhHHHHHHHhCCC
Confidence 4567788999 999999999 565 8999999999999998 899999985 799999999999999999999999
Q ss_pred cCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 434 VGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 434 vGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|++++|+|||.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 78 ~Ge~~~~~ip~~~ayG~~~~~~~-Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 78 VGETAMVTADSKYCYGPQGRSPY-IPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TTCEEEEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHccCCCCCCCc-cCCCCeEEEEEEEEEec
Confidence 99999999999999999988765 99999999999999986
No 17
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=186.36 Aligned_cols=117 Identities=30% Similarity=0.487 Sum_probs=100.6
Q ss_pred cccCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCc
Q 011892 355 GKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMH 433 (475)
Q Consensus 355 ~k~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMk 433 (475)
+.....+++++|++|+++++| +|..+..|+.|+|||+++++.+|++|++++.+ .|+.|.+|.+.+|+||++||.+|+
T Consensus 16 ~~~~~~v~~~~gl~~~vl~~G--~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~ 93 (134)
T 3b7x_A 16 SQRMLDISGDRGVLKDVIREG--AGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMR 93 (134)
T ss_dssp TTTCEESSSSSSEEEEEEECC--EEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCE
T ss_pred ccccceeeCCCCEEEEEEEcC--CCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCC
Confidence 444445668999999999999 68899999999999999983269999999865 799999999999999999999999
Q ss_pred cCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 434 VGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 434 vGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|++++|+|||.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 94 ~Ge~~~v~ip~~~aYG~~~~~~~-Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 94 RGELARFLFKPNYAYGTLGCPPL-IPPNTTVLFEIELLDFL 133 (134)
T ss_dssp ETCEEEEEECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEC
T ss_pred CCCEEEEEECHHHCcCCCCCCCC-cCcCCeEEEEEEEEEEe
Confidence 99999999999999999998776 99999999999999986
No 18
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.88 E-value=9.8e-23 Score=196.56 Aligned_cols=118 Identities=37% Similarity=0.617 Sum_probs=109.4
Q ss_pred ccccccccCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHH
Q 011892 350 NSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVG 428 (475)
Q Consensus 350 ~~~~~~k~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeA 428 (475)
..+++...+.+.++++|++|+++++| +|..|..||.|+|||++++ .||++|++++.+ .|+.|.+| .+|+||+++
T Consensus 106 fl~~~~~~~~v~~~~sGl~y~vl~~G--~G~~p~~gD~V~V~Y~g~l-~dG~vfdss~~~g~p~~f~lg--~vI~G~eea 180 (224)
T 1q6h_A 106 YREKFAKEKGVKTSSTGLVYQVVEAG--KGEAPKDSDTVVVNYKGTL-IDGKEFDNSYTRGEPLSFRLD--GVIPGWTEG 180 (224)
T ss_dssp HHHHHHHSTTEEECTTSCEEEEEECC--SSCCCCTTCEEEEEEEEEE-TTSCEEEEGGGGTSCEEEEGG--GSCHHHHHH
T ss_pred HHHHhCcCCCeEECCCceEEEEEecc--cCccccCCCEEEEEEEEEe-CCCCEEeeccccCCCEEEEcC--CcchhHHHH
Confidence 33467788899999999999999999 6899999999999999998 799999999865 79999995 899999999
Q ss_pred HcCCccCcEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 429 LEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 429 L~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
|.+|++|++++|+|||.++||..+.++ |||+++|+|+|+|++|+
T Consensus 181 L~gMk~Gek~~v~IP~~laYG~~g~~~--IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 181 LKNIKKGGKIKLVIPPELAYGKAGVPG--IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp GGGSCTTCEEEEEECGGGTTTTTCBTT--BCTTCCEEEEEEEEEEC
T ss_pred HcCCCCCCEEEEEECchhhcCcCCCCC--CCCCCEEEEEEEEEEeC
Confidence 999999999999999999999998875 99999999999999985
No 19
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.88 E-value=3.5e-23 Score=182.13 Aligned_cols=113 Identities=42% Similarity=0.688 Sum_probs=104.0
Q ss_pred cCCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcC----
Q 011892 357 LSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEG---- 431 (475)
Q Consensus 357 ~~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~G---- 431 (475)
...+.++++|++|++++.| +|..+..||.|+|||++++ .+|++|++++.+ .|+.|.+|.+.+|+||+++|.+
T Consensus 4 ~~~~~~~~~Gl~~~~l~~G--~G~~~~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~ 80 (129)
T 1u79_A 4 SCEFSVSPSGLAFCDKVVG--YGPEAVKGQLIKAHYVGKL-ENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGI 80 (129)
T ss_dssp -CCCEECTTSCEEEEEECC--SSCBCCTTCEEEEEEEEEC-TTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTB
T ss_pred CCccEECCCCeEEEEEEcC--CCCCCCCCCEEEEEEEEEE-CCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccc
Confidence 4567889999999999999 7899999999999999998 799999999753 7999999999999999999998
Q ss_pred --CccCcEEEEEEcCCCCCCCCCCC-----CCCCCCCCeEEEEEEEEee
Q 011892 432 --MHVGEKRRLLIPPSLGYGSGGDD-----SKNIPPYSWLEFDVDLVKV 473 (475)
Q Consensus 432 --MkvGEk~~ViIPp~LAYG~~G~~-----~kgIPPnStLVFdVELL~V 473 (475)
|++|++++|+|||.+|||..+.+ +. |||+++|+|+|+|++|
T Consensus 81 ~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~-Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 81 PPMLTGGKRTLRIPPELAYGDRGAGCKGGSCL-IPPASVLLFDIEYIGK 128 (129)
T ss_dssp CCCBTTCEEEEEECGGGTTGGGCEEEETTEEE-ECTTCCEEEEEEEEEE
T ss_pred cccCCCCEEEEEEChHHccCCCCCCccccCCc-CCCCCeEEEEEEEEEe
Confidence 99999999999999999998863 23 9999999999999987
No 20
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.88 E-value=1.2e-22 Score=180.48 Aligned_cols=109 Identities=33% Similarity=0.552 Sum_probs=101.8
Q ss_pred CCCCeEEEEEeecCCCCC-CCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEE
Q 011892 363 LPNGLVIQKLGTGKPDGK-VAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRL 440 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG~-~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~V 440 (475)
+++|++|+++++| +|. .|..||.|+|||++++ .+|++|++++.+ .|+.|.+|.+++|+||++||.+|++|++++|
T Consensus 12 ~~~gl~~~~l~~G--~g~~~~~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v 88 (135)
T 1r9h_A 12 KDGGVLKLIKKEG--QGVVKPTTGTTVKVHYVGTL-ENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEF 88 (135)
T ss_dssp CCSSEEEEEEECC--BSSCCCCTTCEEEEEEEEEE-TTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred CCCcEEEEEEEcc--CCCcCCCCCCEEEEEEEEEE-CCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEE
Confidence 6889999999999 575 6999999999999998 899999998754 7999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 441 LIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 441 iIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
+|||.+|||..+.++. |||+++|+|+|+|+.|++
T Consensus 89 ~ip~~~aYG~~g~~~~-Ip~~~~l~f~v~l~~i~~ 122 (135)
T 1r9h_A 89 TIRSDYGYGDAGSPPK-IPGGATLIFEVELFEWSA 122 (135)
T ss_dssp EECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEEC
T ss_pred EEChHHcCCCCCCCCC-cCcCCcEEEEEEEEEeec
Confidence 9999999999998776 999999999999999864
No 21
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=2.1e-22 Score=178.87 Aligned_cols=114 Identities=29% Similarity=0.397 Sum_probs=104.4
Q ss_pred cccCCeeeCCCC-eEEEEEeecCCCCC--CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcC
Q 011892 355 GKLSLLRTLPNG-LVIQKLGTGKPDGK--VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEG 431 (475)
Q Consensus 355 ~k~~~v~ttpSG-l~ykILkeGkgtG~--~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~G 431 (475)
....++..+++| ++|+++++| +|. .|..||.|+|||++++ .+|++|+++ .|+.|.+|.+.+|+||+++|.+
T Consensus 6 ~~~~~~~~~~~g~l~~~vl~~G--~G~~~~~~~gd~V~v~Y~g~~-~dG~~fds~---~p~~f~lG~g~~i~G~e~~L~g 79 (135)
T 2d9f_A 6 SGEEWLDILGNGLLRKKTLVPG--PPGSSRPVKGQVVTVHLQTSL-ENGTRVQEE---PELVFTLGDCDVIQALDLSVPL 79 (135)
T ss_dssp CCSSCEESSSSSSSEEEEEECC--CSSCCCCCTTSEEEEEEEEEE-SSSCEEEEE---EEEEEETTSCCSCTTTTTTGGG
T ss_pred CcccCcEECCCCCEEEEEEEcC--CCCCccCCCCCEEEEEEEEEE-CCCCEEecC---CCEEEEeCCCChhHHHHHHHhC
Confidence 356678889999 999999999 565 8999999999999998 899999984 7999999999999999999999
Q ss_pred CccCcEEEEEEcCCCCCCCCC-CCCCCCCCCCeEEEEEEEEeeeC
Q 011892 432 MHVGEKRRLLIPPSLGYGSGG-DDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 432 MkvGEk~~ViIPp~LAYG~~G-~~~kgIPPnStLVFdVELL~VKk 475 (475)
|++|++++|+|||.+|||..+ .++. |||+++|+|+|+|++|++
T Consensus 80 m~~Ge~~~v~ip~~~aYG~~~~~~~~-Ip~~~~l~f~vel~~v~~ 123 (135)
T 2d9f_A 80 MDVGETAMVTADSKYCYGPQGSRSPY-IPPHAALCLEVTLKTAVD 123 (135)
T ss_dssp SCTTCEEEEEECHHHHTCTTCCSSSC-CCTTCCEEEEEEEEEEES
T ss_pred CCCCCEEEEEEChhHccCcCCcCCCc-cCCCCeEEEEEEEEEeec
Confidence 999999999999999999998 5554 999999999999999864
No 22
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.86 E-value=2.3e-22 Score=186.07 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=79.2
Q ss_pred eeCCCCeEEEEEeecCCCCCC--CCCCCEEEEEEEEEEc-cCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCc
Q 011892 361 RTLPNGLVIQKLGTGKPDGKV--AAPGKKISVLYTGKLK-ENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGE 436 (475)
Q Consensus 361 ~ttpSGl~ykILkeGkgtG~~--p~~GD~VtVhYtg~l~-~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGE 436 (475)
.++.+||+|+||++| .|.. +..|+.|+|||+++++ .+|++||||+.+ .|+.|.||.+++|+||++||.+|++|+
T Consensus 6 ~~~~~Gv~~~vl~~G--~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge 83 (165)
T 2lkn_A 6 RLREDGIQKRVIQEG--RGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGE 83 (165)
T ss_dssp HHHTTSCCCCEEECC--SSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTC
T ss_pred cccCCCeEEEEEECC--cCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCc
Confidence 357899999999999 5654 5689999999999983 249999999987 899999999999999999999999999
Q ss_pred EEEEEEcCCCCCC
Q 011892 437 KRRLLIPPSLGYG 449 (475)
Q Consensus 437 k~~ViIPp~LAYG 449 (475)
+++|+|||.+|||
T Consensus 84 ~~~~~ipp~laYG 96 (165)
T 2lkn_A 84 IAQFLCDIKHVVL 96 (165)
T ss_dssp EEEEECCHHHHSS
T ss_pred eEEEEECHHHhcC
Confidence 9999999999999
No 23
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.84 E-value=4.1e-21 Score=161.48 Aligned_cols=96 Identities=46% Similarity=0.768 Sum_probs=90.2
Q ss_pred CCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCCCCC
Q 011892 378 DGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSK 456 (475)
Q Consensus 378 tG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~~~k 456 (475)
+|..+..||.|+|||++++ .+|++|++++.+ .|+.|.+|.+++++||+++|.+|++|++++|+|||.+|||..+.++.
T Consensus 2 ~g~~~~~gd~V~v~y~~~~-~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~ 80 (102)
T 2pbc_A 2 SPIKSRKGDVLHMHYTGKL-EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK 80 (102)
T ss_dssp CCCCCCTTCEEEEEEEEEC-TTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTT
T ss_pred CCCcCCCCCEEEEEEEEEE-CCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCC
Confidence 5788999999999999998 899999999864 89999999999999999999999999999999999999999988765
Q ss_pred CCCCCCeEEEEEEEEeeeC
Q 011892 457 NIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 457 gIPPnStLVFdVELL~VKk 475 (475)
|||+++|+|+|+|++|++
T Consensus 81 -Ip~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 81 -IPGGATLVFEVELLKIER 98 (102)
T ss_dssp -BCTTCCEEEEEEEEEEGG
T ss_pred -cCcCCeEEEEEEEEEecc
Confidence 999999999999999863
No 24
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.83 E-value=4.5e-20 Score=182.54 Aligned_cols=108 Identities=34% Similarity=0.577 Sum_probs=101.6
Q ss_pred CCCCeEEEEEeecCCCCCC-CCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEE
Q 011892 363 LPNGLVIQKLGTGKPDGKV-AAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRL 440 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG~~-p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~V 440 (475)
+++||+|+++++| +|.. |..||.|+|||++++ .+|++|++++.+ .|+.|.||.+.+|+||++||.+|++|++++|
T Consensus 49 ~~~gl~~~vl~~G--~G~~~~~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v 125 (280)
T 1q1c_A 49 QDEGVLKVIKREG--TGTEMPMIGDRVFVHYTGWL-LDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHI 125 (280)
T ss_dssp CSSSEEEEEEECC--SSSCCCCTTCEEEEEEEEEE-TTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEE
T ss_pred CCCceEEEEEeCC--CCCcCCCCCCEEEEEEEEEE-CCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEE
Confidence 5789999999999 5766 999999999999999 899999999875 8999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 441 LIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 441 iIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|||.+|||..+.++. |||+++|+|+|+|+.|+
T Consensus 126 ~ipp~~aYG~~g~~~~-Ip~~~~lvf~Vel~~i~ 158 (280)
T 1q1c_A 126 TCKPEYAYGSAGSPPK-IPPNATLVFEVELFEFK 158 (280)
T ss_dssp EECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred EECcHHhCCCcCccCC-CCCCCcEEEEEEeeeec
Confidence 9999999999987765 99999999999999986
No 25
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.80 E-value=6.1e-20 Score=188.81 Aligned_cols=108 Identities=35% Similarity=0.596 Sum_probs=83.3
Q ss_pred CCCCeEEEEEeecCCCCCC-CCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEE
Q 011892 363 LPNGLVIQKLGTGKPDGKV-AAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRL 440 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG~~-p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~V 440 (475)
+++|++|+|+++| +|.. |..||.|+|||++++ .+|++|++++.+ .|+.|.||.+.+|+||+++|.+|++|++++|
T Consensus 29 ~~~g~~~~~~~~G--~g~~~~~~gd~v~v~y~~~~-~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~ 105 (457)
T 1kt0_A 29 KDRGVLKIVKRVG--NGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHL 105 (457)
T ss_dssp ----CEEEC----------CCCBTCEEEEEEEEEC------CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEE
T ss_pred CCCcEEEEEEECC--CCCCCCCCCCEEEEEEEEEE-CCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEE
Confidence 6889999999999 6776 999999999999998 899999999876 7999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 441 LIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 441 iIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+|||.++||..|.++. |||+++|+|+|+|++|+
T Consensus 106 ~i~~~~~yg~~g~~~~-i~~~~~l~~~v~l~~~~ 138 (457)
T 1kt0_A 106 LCKPEYAYGSAGSLPK-IPSNATLFFEIELLDFK 138 (457)
T ss_dssp EECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred EEChHHhccccCCCCC-CCCCCcEEEEEeeceee
Confidence 9999999999998775 99999999999999985
No 26
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.79 E-value=1.6e-19 Score=178.41 Aligned_cols=114 Identities=22% Similarity=0.403 Sum_probs=103.7
Q ss_pred CCeeeCCCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCc-chhhcHHHHHcCCccC
Q 011892 358 SLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGK-EVIEGLNVGLEGMHVG 435 (475)
Q Consensus 358 ~~v~ttpSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g-~lIpGLEeAL~GMkvG 435 (475)
..+.++++|++|+|+++| +|..|..|+.|+|||+++++.+|++|++++.. .|+.|.||.+ .+|+||+.+|.+|++|
T Consensus 42 ~~~~~~~~~~~~~~~~~g--~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~G 119 (338)
T 2if4_A 42 SEAEVLDEKVSKQIIKEG--HGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSG 119 (338)
T ss_dssp SCCEEEETTEEEEEEECC--BSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBT
T ss_pred cCceeCCCCeEEEEEeCC--CCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCC
Confidence 456788999999999999 68899999999999999994459999998754 7999999998 8999999999999999
Q ss_pred cEEEEEEcCCCCCCCCCCC--CCCCCCCCeEEEEEEEEeee
Q 011892 436 EKRRLLIPPSLGYGSGGDD--SKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 436 Ek~~ViIPp~LAYG~~G~~--~kgIPPnStLVFdVELL~VK 474 (475)
+++.|+|||.++||..+.. +. ||++++|+|.|+|+.+.
T Consensus 120 e~~~~~i~~~~~yg~~~~~~~~~-ip~~~~l~f~v~L~~~~ 159 (338)
T 2if4_A 120 ERALVHVGWELAYGKEGNFSFPN-VPPMADLLYEVEVIGFD 159 (338)
T ss_dssp CEEEEEECGGGSSCSSCCCSSSC-CCTTCCEEEEEEEEEEE
T ss_pred CeEEEEECHHHhcCCCCCCCCCC-CCCCCcEEEEEEEEEec
Confidence 9999999999999999862 33 99999999999999885
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.78 E-value=9.9e-21 Score=191.88 Aligned_cols=112 Identities=36% Similarity=0.614 Sum_probs=0.5
Q ss_pred CeeeCCCCeEEEEEeecCCCC-CCCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCc
Q 011892 359 LLRTLPNGLVIQKLGTGKPDG-KVAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGE 436 (475)
Q Consensus 359 ~v~ttpSGl~ykILkeGkgtG-~~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGE 436 (475)
...++++|++|+++++| +| ..|..||.|+|||++++ .+|++|++++.+ .|+.|.+|.+++|+||+++|.+|++|+
T Consensus 5 ~~~~~~~Gl~~~i~~~G--~G~~~~~~gd~V~v~Y~g~~-~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 5 ENEIGKQGLKKKLLKEG--EGWDTPEVGDEVEVHYTGTL-LDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceECCCCeEEEEEEee--cCCccCCCCCEEEEEEEEEE-CCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 35578999999999999 57 78999999999999998 799999999876 899999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 437 KRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 437 k~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
+++|+|||.+|||..+.++. |||+++|+|+|+|++|+
T Consensus 82 ~~~~~ip~~~aYG~~g~~~~-Ip~~~~l~f~vel~~~~ 118 (356)
T 3jxv_A 82 NALFTIPPELAYGESGSPPT-IPANATLQFDVELLSWT 118 (356)
T ss_dssp -------------------------------------C
T ss_pred EEEEEEChHHhCCCCCCCCC-cCCCCEEEEEeeEEeee
Confidence 99999999999999998876 99999999999999985
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.76 E-value=2.3e-18 Score=174.53 Aligned_cols=110 Identities=30% Similarity=0.502 Sum_probs=99.3
Q ss_pred CCCCeEEEEEeecCCCC-CCCCCCCEEEEEEEEEEccCCeEEeccC-C-CCCeEEecCCcchhhcHHHHHcCCccCcEEE
Q 011892 363 LPNGLVIQKLGTGKPDG-KVAAPGKKISVLYTGKLKENGQVFDSNL-G-STPLKFHLGGKEVIEGLNVGLEGMHVGEKRR 439 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG-~~p~~GD~VtVhYtg~l~~DGkVfDST~-~-~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ 439 (475)
...|++|+++++| .| ..|..|+.|+|||++++ .||++|+++. . ..|+.|.+|.+++|+||+++|.+|++|++++
T Consensus 242 ~d~~~~~~i~~~g--~g~~~~~~gd~V~v~y~g~l-~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~ 318 (356)
T 3jxv_A 242 DDKKILKKVLKEX--EGYERPNEGAVVTVKITGKL-QDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVAL 318 (356)
T ss_dssp TTCCEEEEEEECC--BSSCCCCTTCEEEEEEEEEE-SSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEE
T ss_pred cccceeEEeeecc--cccCCCCCCCEEEEEEEEEE-CCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEE
Confidence 4679999999999 56 78999999999999999 8999999884 3 3899999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCC-CCCCCCCCeEEEEEEEEeeeC
Q 011892 440 LLIPPSLGYGSGGDD-SKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 440 ViIPp~LAYG~~G~~-~kgIPPnStLVFdVELL~VKk 475 (475)
|+|||.+|||..+.. ...|||+++|+|+|+|++|++
T Consensus 319 v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 319 VTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred EEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 999999999998742 123999999999999999975
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.72 E-value=2.5e-17 Score=162.88 Aligned_cols=105 Identities=26% Similarity=0.504 Sum_probs=95.6
Q ss_pred CCCCeEEEEEeecCCCCC-CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcc---hhhcHHHHHcCCccCcEE
Q 011892 363 LPNGLVIQKLGTGKPDGK-VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKE---VIEGLNVGLEGMHVGEKR 438 (475)
Q Consensus 363 tpSGl~ykILkeGkgtG~-~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~---lIpGLEeAL~GMkvGEk~ 438 (475)
.+.|++|+++++| .|. .|..||.|+|||++++ +|++|++ .|+.|.||.+. +|+||+++|.+|++|+++
T Consensus 166 ~d~gl~~~il~~G--~G~~~~~~gd~V~i~y~g~~--dG~~fd~----~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 166 EDGGIIRRIQTRG--EGYAKPNEGAIVEVALEGYY--KDKLFDQ----RELRFEIGEGENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp CSSSEEEEEEECC--SCSCCCCTTCEEEEEEEEEE--TTEEEEE----EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred cccceeEEeeecc--cccccccCCceEEEEEEEEe--CCEEEec----CCeEEEecCCcccccchhHHHHHhCCCCCcEE
Confidence 4578999999999 566 6999999999999998 8999997 48999999987 599999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 439 RLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 439 ~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
+|+|||.++||..+.+...|||+++|+|+|+|++|++
T Consensus 238 ~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~ 274 (280)
T 1q1c_A 238 IVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEK 274 (280)
T ss_dssp EEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeC
Confidence 9999999999998866545999999999999999974
No 30
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.60 E-value=4.4e-15 Score=137.77 Aligned_cols=73 Identities=29% Similarity=0.445 Sum_probs=68.4
Q ss_pred CCCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCC
Q 011892 380 KVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGD 453 (475)
Q Consensus 380 ~~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~ 453 (475)
+.++.|+.|+|+|++++ .+|++|++++...|+.|.+|.+++||||++||.||++|+++.|.|||.+|||.++.
T Consensus 1 M~i~~gd~V~v~Y~g~~-~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~ 73 (171)
T 2k8i_A 1 MKVAKDLVVSLAYQVRT-EDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (171)
T ss_dssp CCCCTTEEEEEEEEEEE-TTSCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT
T ss_pred CcCCCCCEEEEEEEEEE-CCCCEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 35789999999999998 79999999988789999999999999999999999999999999999999998853
No 31
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.58 E-value=2.5e-15 Score=130.37 Aligned_cols=87 Identities=22% Similarity=0.332 Sum_probs=76.0
Q ss_pred CCCCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCCCCCCC
Q 011892 379 GKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNI 458 (475)
Q Consensus 379 G~~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~~~kgI 458 (475)
+..++.||.|+|+|++++ +|++|++++ ..|+.|.+|.+++||||+++|.+|++|+++.|.||+...||..+
T Consensus 27 ~~~~~~gD~V~v~Y~g~~--dG~~fdss~-~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~------ 97 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV--DNKKLASAS-AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKE------ 97 (113)
T ss_dssp --CCCSSEEEEEEEEEEE--TTEECSTTC-CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSG------
T ss_pred CCCCCCCCEEEEEEEEEE--CCEEcccCC-ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCC------
Confidence 457899999999999998 999999986 48999999999999999999999999999999997444498764
Q ss_pred CCCCeEEEEEEEEeee
Q 011892 459 PPYSWLEFDVDLVKVH 474 (475)
Q Consensus 459 PPnStLVFdVELL~VK 474 (475)
.++++|+|+|+|++|+
T Consensus 98 ~~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 98 LQSKPVTFEVVLKAIK 113 (113)
T ss_dssp GGSCCCEEEEEECCBC
T ss_pred CCCCEEEEEEEEEEEC
Confidence 2568999999999885
No 32
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.58 E-value=5.7e-15 Score=134.03 Aligned_cols=73 Identities=25% Similarity=0.459 Sum_probs=68.7
Q ss_pred CCCCCCCEEEEEEEEEEcc-CCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCC
Q 011892 380 KVAAPGKKISVLYTGKLKE-NGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGD 453 (475)
Q Consensus 380 ~~p~~GD~VtVhYtg~l~~-DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~ 453 (475)
..++.|+.|+|||++++ . +|++|++++...|+.|.+|.+++||||++||.+|++|+++.|.|||.+|||.++.
T Consensus 5 ~~i~~gd~V~v~Y~g~~-~~dG~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVRE-QGSSIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEE-SSCSCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred cCCCCCCEEEEEEEEEE-CCCCCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 46889999999999998 6 9999999987789999999999999999999999999999999999999998764
No 33
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.58 E-value=2.3e-15 Score=139.72 Aligned_cols=72 Identities=28% Similarity=0.491 Sum_probs=68.0
Q ss_pred CCCCCCEEEEEEEEEEccCCeEEeccCCC-CCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCC
Q 011892 381 VAAPGKKISVLYTGKLKENGQVFDSNLGS-TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGD 453 (475)
Q Consensus 381 ~p~~GD~VtVhYtg~l~~DGkVfDST~~~-~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~ 453 (475)
.++.|+.|+|||++++ .+|++|++++.. .|+.|.+|.+++||||++||.+|++|+++.|+|||.+|||.++.
T Consensus 24 ~i~~gd~V~v~Y~g~l-~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKL-DDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEE-TTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred cCCCCCEEEEEEEEEE-CCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 5899999999999998 899999999865 89999999999999999999999999999999999999998753
No 34
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.57 E-value=6.6e-15 Score=139.51 Aligned_cols=73 Identities=29% Similarity=0.445 Sum_probs=68.7
Q ss_pred CCCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCC
Q 011892 380 KVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGD 453 (475)
Q Consensus 380 ~~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~ 453 (475)
+.++.|++|+|+|++++ .+|++|++++...|+.|.+|.+++||||+++|.+|++|++++|.|||.+|||.++.
T Consensus 1 M~i~~gd~V~v~Y~g~~-~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 1 MKVAKDLVVSLAYQVRT-EDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp CCCCSSCEEEEEEEEEE-TTTEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCCCCCEEEEEEEEEE-CCCCEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 35789999999999998 89999999988789999999999999999999999999999999999999998764
No 35
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.56 E-value=3.9e-15 Score=136.50 Aligned_cols=71 Identities=28% Similarity=0.636 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEEEEEEccCCeEEeccCCC--------------CCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCC
Q 011892 381 VAAPGKKISVLYTGKLKENGQVFDSNLGS--------------TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSL 446 (475)
Q Consensus 381 ~p~~GD~VtVhYtg~l~~DGkVfDST~~~--------------~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~L 446 (475)
.++.|+.|+|||++++ +|++|++++.. .|+.|.+|.+++||||++||.+|++|++++|+|||.+
T Consensus 1 ~i~~Gd~V~v~Y~g~l--dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 1 MVEKGKMVKISYDGYV--DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CCCTTCEEEEEEEEEE--TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCCCEEEEEEEEEE--CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 3688999999999998 99999999853 6999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 011892 447 GYGSGGD 453 (475)
Q Consensus 447 AYG~~G~ 453 (475)
|||.++.
T Consensus 79 aYG~~~~ 85 (157)
T 3pr9_A 79 AFGKRDP 85 (157)
T ss_dssp TTCCCCG
T ss_pred hcCCCCh
Confidence 9999874
No 36
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.55 E-value=3.1e-14 Score=140.29 Aligned_cols=108 Identities=25% Similarity=0.480 Sum_probs=96.6
Q ss_pred eeeCCCCeEEEEEeecCCCCC-CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcc---hhhcHHHHHcCCccC
Q 011892 360 LRTLPNGLVIQKLGTGKPDGK-VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKE---VIEGLNVGLEGMHVG 435 (475)
Q Consensus 360 v~ttpSGl~ykILkeGkgtG~-~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~---lIpGLEeAL~GMkvG 435 (475)
.++.++||+++|+++| +|. .|..|+.|+|||++++ +|++|+++ |+.|.+|.|. +++||+.||.+|+.|
T Consensus 20 ~~~~~~~~~~~~~~~g--~g~~~p~~~~~v~v~y~g~~--~g~~fd~~----~~~f~lG~g~~~~~~~~~e~al~~~~~G 91 (336)
T 1p5q_A 20 HMEEDGGIIRRIQTRG--EGYAKPNEGAIVEVALEGYY--KDKLFDQR----ELRFEIGEGENLDLPYGLERAIQRMEKG 91 (336)
T ss_dssp --CCTTSEEEEEEECC--CCSCCCCTTCEEEEEEEEEE--TTEEEEEE----EEEEETTCGGGGTCCHHHHHHHTTCCTT
T ss_pred eecCCCcEEEEEEeCC--CCCCCCCCCCeEEEEEEEEE--CCEEEecC----CeEEEeCCCCccccchHHHHHHhcCCCC
Confidence 3456789999999999 576 7999999999999998 89999986 8999999886 589999999999999
Q ss_pred cEEEEEEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeeC
Q 011892 436 EKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 436 Ek~~ViIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VKk 475 (475)
+++.|.|||.++||..|.....||++++++|.+.|..+.+
T Consensus 92 e~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~ 131 (336)
T 1p5q_A 92 EHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEK 131 (336)
T ss_dssp CEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEEC
T ss_pred CeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeeccc
Confidence 9999999999999999977544999999999999998753
No 37
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.53 E-value=5.3e-15 Score=134.28 Aligned_cols=72 Identities=36% Similarity=0.684 Sum_probs=66.7
Q ss_pred CCCCCEEEEEEEEEEccCCeEEeccCC--------------CCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCC
Q 011892 382 AAPGKKISVLYTGKLKENGQVFDSNLG--------------STPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLG 447 (475)
Q Consensus 382 p~~GD~VtVhYtg~l~~DGkVfDST~~--------------~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LA 447 (475)
++.|+.|+|||++++ .+|++|++++. ..|+.|.+|.+++|+||++||.+|++|++++|.|||.+|
T Consensus 2 i~~gd~V~v~Y~g~~-~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKL-ESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCTTCEEEECCEECC-TTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCEEEEEEEEEE-CCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 678999999999998 89999999962 379999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 011892 448 YGSGGDD 454 (475)
Q Consensus 448 YG~~G~~ 454 (475)
||.++..
T Consensus 81 YG~~~~~ 87 (151)
T 1ix5_A 81 YGNRNEM 87 (151)
T ss_dssp SCSCCST
T ss_pred CCCCCcc
Confidence 9987653
No 38
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.53 E-value=2.3e-14 Score=138.97 Aligned_cols=70 Identities=29% Similarity=0.637 Sum_probs=65.7
Q ss_pred CCCCCEEEEEEEEEEccCCeEEeccCCC--------------CCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCC
Q 011892 382 AAPGKKISVLYTGKLKENGQVFDSNLGS--------------TPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLG 447 (475)
Q Consensus 382 p~~GD~VtVhYtg~l~~DGkVfDST~~~--------------~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LA 447 (475)
++.|+.|+|||++++ +|++|++++.. .|+.|.+|.+++||||++||.+|++|++++|+|||.+|
T Consensus 2 i~~Gd~V~v~Y~g~l--dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~A 79 (231)
T 3prb_A 2 VEKGKMVKISYDGYV--DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKA 79 (231)
T ss_dssp CCTTCEEEEEEEEEE--TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGT
T ss_pred CCCCCEEEEEEEEEE--CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHh
Confidence 678999999999998 99999999852 69999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 011892 448 YGSGGD 453 (475)
Q Consensus 448 YG~~G~ 453 (475)
||.++.
T Consensus 80 YGe~~~ 85 (231)
T 3prb_A 80 FGKRDP 85 (231)
T ss_dssp TCCCCG
T ss_pred cCCCCh
Confidence 998763
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.41 E-value=3.7e-13 Score=123.31 Aligned_cols=67 Identities=28% Similarity=0.481 Sum_probs=62.6
Q ss_pred CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCC
Q 011892 381 VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGD 453 (475)
Q Consensus 381 ~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~ 453 (475)
.++.|+.|+|+|+++ .+|++|++++ +.|.+|.+++||||++||.+|++|+++.|.|||.+|||.++.
T Consensus 2 ~i~~gd~V~v~Y~g~--~dG~~fdss~----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 2 KVGQDKVVTIRYTLQ--VEGEVLDQGE----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp BCCTTEEEEEEEEEE--ETTEEEEEEE----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred cCCCCCEEEEEEEEE--ECCEEEEeeE----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 478899999999999 4999999986 999999999999999999999999999999999999998753
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.29 E-value=4.3e-12 Score=132.35 Aligned_cols=88 Identities=18% Similarity=0.369 Sum_probs=79.7
Q ss_pred CCCCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCCCCCCC
Q 011892 379 GKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNI 458 (475)
Q Consensus 379 G~~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~~~kgI 458 (475)
+..+..||.|+|||+++. +|+.|++++. .|+.|.+|.|.+||||+++|.||++|+++.|.||+..+||..+.
T Consensus 155 ~~~~~~gD~V~i~y~g~~--dG~~fd~~~~-~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l----- 226 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV--DGEEFEGGKA-SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL----- 226 (432)
T ss_dssp SSCCCTTCEEEECEEEES--SSCBCSSCCC-SSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-----
T ss_pred CCCCCCCCEEEEEEEEee--CCeEccCCCc-cceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-----
Confidence 456899999999999985 9999999874 89999999999999999999999999999999999999997653
Q ss_pred CCCCeEEEEEEEEeeeC
Q 011892 459 PPYSWLEFDVDLVKVHR 475 (475)
Q Consensus 459 PPnStLVFdVELL~VKk 475 (475)
+|.+++|.|+|++|++
T Consensus 227 -ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 227 -KGKAAKFAINLKKVEE 242 (432)
T ss_dssp -SSCEEEEEEECCEECC
T ss_pred -CCceEEEEEEEEEEec
Confidence 4569999999999864
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.15 E-value=2e-10 Score=117.99 Aligned_cols=104 Identities=24% Similarity=0.459 Sum_probs=92.4
Q ss_pred CCCeEEEEEeecCCCCCCCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcc---hhhcHHHHHcCCccCcEEEE
Q 011892 364 PNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKE---VIEGLNVGLEGMHVGEKRRL 440 (475)
Q Consensus 364 pSGl~ykILkeGkgtG~~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~---lIpGLEeAL~GMkvGEk~~V 440 (475)
+.++.+++++.|. ....|..|+.|+|||++++ +|++|++. ++.|.+|.|. +++||+.||..|+.|+++.|
T Consensus 145 dg~~~k~i~~~g~-~~~~p~~g~~V~v~y~g~~--~g~~f~~~----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l 217 (457)
T 1kt0_A 145 DGGIIRRTKRKGE-GYSNPNEGATVEIHLEGRC--GGRMFDCR----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCIL 217 (457)
T ss_dssp SSSEEEEEEECCB-CSCCCCTTCEEEEEEEEEE--TTEEEEEE----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEE
T ss_pred CcceEEEEEecCC-CCCCCCCCCEEEEEEEEEe--CCeEEecC----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEE
Confidence 4578999999995 2468999999999999998 89999973 6999999764 89999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 011892 441 LIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 474 (475)
Q Consensus 441 iIPp~LAYG~~G~~~kgIPPnStLVFdVELL~VK 474 (475)
.|+|.++||..|.....|||++++.|.+.|..+.
T Consensus 218 ~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~ 251 (457)
T 1kt0_A 218 YLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFE 251 (457)
T ss_dssp EECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEE
T ss_pred EECcccccCCCCCcccCCCCCCEEEEEhhhhhcc
Confidence 9999999999987654599999999999998875
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.11 E-value=2.4e-11 Score=125.34 Aligned_cols=86 Identities=20% Similarity=0.351 Sum_probs=76.5
Q ss_pred CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCCCCCCCCC
Q 011892 381 VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPP 460 (475)
Q Consensus 381 ~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPP 460 (475)
.+..||.|+|||+++. +|..|+++. ..|+.|.+|.|.+||||+++|.||++|+++.|.||+...||..+. +
T Consensus 160 ~~~~gD~V~i~y~g~~--dG~~fd~~~-~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l------a 230 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI--DGVEFEGGK-AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL------K 230 (392)
T ss_dssp CCCTTCEEEEEEEEES--SSSCCTTCE-EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT------S
T ss_pred CCCCCCEEEEEEEEEE--CCEEccCCC-ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC------C
Confidence 5899999999999985 999999874 379999999999999999999999999999999987788886533 5
Q ss_pred CCeEEEEEEEEeeeC
Q 011892 461 YSWLEFDVDLVKVHR 475 (475)
Q Consensus 461 nStLVFdVELL~VKk 475 (475)
|.+++|.|+|+.|++
T Consensus 231 Gk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 231 GKAAKFAIKVNKVEA 245 (392)
T ss_dssp SCEEEECCCEEEEEE
T ss_pred CCeEEEEEEEEEEEc
Confidence 679999999999863
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.76 E-value=3e-05 Score=80.96 Aligned_cols=73 Identities=10% Similarity=-0.032 Sum_probs=62.2
Q ss_pred CCCCCCEEEEEEEEEEccCCeEEeccCCCCCeEEecCCcchhhcHHHHHcCCccCcEEEEEEcCCCCCCCCCCCCCCCCC
Q 011892 381 VAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPP 460 (475)
Q Consensus 381 ~p~~GD~VtVhYtg~l~~DGkVfDST~~~~P~~f~LG~g~lIpGLEeAL~GMkvGEk~~ViIPp~LAYG~~G~~~kgIPP 460 (475)
.+..||.|+|+|+++. +|..|+++.. .++.|.+|.+. + |+.+|.||++|+.+.|.+.. +
T Consensus 154 ~a~~gD~V~id~~~~~--dG~~~~~~~~-~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF---------------a 212 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN--EEGKKLTSRE-YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY---------------E 212 (433)
T ss_dssp CCCTTSEEEEEEEEEC--TTSCEEEEEE-EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE---------------T
T ss_pred ccCCCCEEEEEEEEEE--CCEECcCCCC-CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee---------------C
Confidence 5789999999999885 9999987644 67888898877 4 99999999999999998843 3
Q ss_pred CCeEEEEEEEEeee
Q 011892 461 YSWLEFDVDLVKVH 474 (475)
Q Consensus 461 nStLVFdVELL~VK 474 (475)
|.+..|.|+|..|+
T Consensus 213 Gk~a~F~VtV~~Ik 226 (433)
T 3gty_X 213 GKKYTYKLEVEEVY 226 (433)
T ss_dssp TEEEEEEEEEEEEE
T ss_pred CCeEEEEEEEEEEE
Confidence 45889999999986
No 44
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=38.08 E-value=84 Score=28.10 Aligned_cols=25 Identities=16% Similarity=0.166 Sum_probs=20.4
Q ss_pred chhhcHHHHHcCCccCcEEEEEEcC
Q 011892 420 EVIEGLNVGLEGMHVGEKRRLLIPP 444 (475)
Q Consensus 420 ~lIpGLEeAL~GMkvGEk~~ViIPp 444 (475)
++.--|-.||.|.++|+.+.|.+|.
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P~ 143 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTPA 143 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECSS
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcCC
Confidence 3455688999999999999997654
No 45
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=27.03 E-value=1.1e+02 Score=35.28 Aligned_cols=59 Identities=20% Similarity=0.343 Sum_probs=47.1
Q ss_pred CCCCCCEEEEEEEEEEccCCe-------------------------------EEeccCCCCCeEEecCCcchhhcHHHHH
Q 011892 381 VAAPGKKISVLYTGKLKENGQ-------------------------------VFDSNLGSTPLKFHLGGKEVIEGLNVGL 429 (475)
Q Consensus 381 ~p~~GD~VtVhYtg~l~~DGk-------------------------------VfDST~~~~P~~f~LG~g~lIpGLEeAL 429 (475)
.|..|+.|.|.|++++..+|. .+++. ..+.|-+|.+.+.+-++-.|
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~---~e~~fe~g~g~~~~~le~vV 636 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESN---EEIEFEVGTGSMNPHIESEV 636 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEE---EEEEEEETTTCBCHHHHHHH
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhccccc---HHHHHHHhcCCccchhhhee
Confidence 467899999999999854442 22222 46889999999999999999
Q ss_pred cCCccCcEEEEEE
Q 011892 430 EGMHVGEKRRLLI 442 (475)
Q Consensus 430 ~GMkvGEk~~ViI 442 (475)
..|.+|+.+.|..
T Consensus 637 ~qms~gqT~~F~~ 649 (950)
T 3htx_A 637 TQMTVGEYASFKM 649 (950)
T ss_dssp TTCCTTCEEEEEE
T ss_pred eeccccceeEEec
Confidence 9999999988874
No 46
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=21.16 E-value=1.6e+02 Score=25.48 Aligned_cols=24 Identities=25% Similarity=0.482 Sum_probs=20.3
Q ss_pred hhhcHHHHHcCCccCcEEEEEEcC
Q 011892 421 VIEGLNVGLEGMHVGEKRRLLIPP 444 (475)
Q Consensus 421 lIpGLEeAL~GMkvGEk~~ViIPp 444 (475)
+.--+-.||.|.++|+.+.+.+|.
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~ 113 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPG 113 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 445688999999999999998765
Done!