BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011894
(475 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BHY2|NOC4L_MOUSE Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2
SV=1
Length = 516
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 30/279 (10%)
Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
K+ K F + W+ FL+ LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEHKKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305
Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
++AL+ LFIL+ +H LEYP+FY+KLY LL PSIF K+RA+FF L D L S LPAYL
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365
Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
AAF K+L+RL++ PP L+++ LI NLLRRHP+ ++HR G E +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413
Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
DA D +D E +P +S A+ S LWE+ TL+ HY P VS+ + L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSKAASVINQVL 460
Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 419
+V E+++ + IF +++++++ + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKKMPESVPLEF 495
>sp|Q5I0I8|NOC4L_RAT Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l
PE=2 SV=1
Length = 516
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 173/300 (57%), Gaps = 32/300 (10%)
Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
K+ + F + W+ FL+ LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEQRKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305
Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
++AL+ LFIL+ +H LEYP+FY++LY LL PSIF K+RA+FF L D L S LPAYL
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365
Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
AAF K+L+RL++ PP L+++ LI NLLRRHP+ ++HR G E +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413
Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
DA D +D E +P +S A+ S LWE+ TL+ HY P VSR + L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSRAASVINQAL 460
Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAFYKTTPTSLFSDSDFAGWTFIC 440
+V E+++ + IF +++++ + + VPL F L D F C
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKMMPESVPLEFIPA--KGLLGRQDDLCTQFFC 514
>sp|Q5ZJC7|NOC4L_CHICK Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2
SV=1
Length = 508
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 166/275 (60%), Gaps = 28/275 (10%)
Query: 145 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMA 204
K F + W+TFL+ LP +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++A
Sbjct: 241 KQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLA 300
Query: 205 LSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAF 264
L+ LFIL+ QH LEYP+FY+KLY+LL PSI+ K+RA+FF L D L S LPAYL AAF
Sbjct: 301 LNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAF 360
Query: 265 VKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAA 324
+K+LSRL++ PP L+++ I NL RRHP+ L+HR +G + ++D
Sbjct: 361 IKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDP---------- 410
Query: 325 TVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 384
+ E+ P +S A+ SSLWE+ +L++HY P V++ L L+
Sbjct: 411 --------------YIMEQEEPSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLS-- 454
Query: 385 AKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 419
E ++ S + +F +EI++ VPL F
Sbjct: 455 --EIEDDISGLLELSASELFDKEIKKTSANVPLEF 487
>sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b
PE=2 SV=1
Length = 525
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 162/278 (58%), Gaps = 29/278 (10%)
Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
K+ K F + W++FL+ L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KEQKRVFERVWMSFLKHQLSVSLYKKVLLILHESILPHMSKPSLMIDFLTAAYDVGGAIS 316
Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
++AL+ LFIL+ QH LEYP+FY+KLY+LL PS+F K+RA+FF L + L S LP YL
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSVFHVKYRARFFHLANLFLSSTHLPVYLV 376
Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
AAF K+L+RL++ PP L+I+ I NL+RRHP+ L+HR + D
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAGDLVTD--------- 427
Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
P I EE +P KS A+ S LWE++ L+ HY V R N +
Sbjct: 428 ------------PYI----MEEQDPAKSQALESCLWELEVLQQHYHGDVVRAA----NVI 467
Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 419
+ E +V S +F +E++++ K VPL +
Sbjct: 468 SRALSAQESDVSGLLEMSSCELFDKEMKKKFKSVPLEY 505
>sp|Q4VBT2|NOC4L_DANRE Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2
SV=1
Length = 525
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 173/296 (58%), Gaps = 29/296 (9%)
Query: 128 EKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLC 187
++S ++ AA + K+ K F + W+ FLR LP +YK++LV LH +++P +S+P ++
Sbjct: 242 QQSKHDDWKAAKL-KEHKRAFEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMM 300
Query: 188 DFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELL 247
DFL+ +YDIGG +S+ AL+ LF+ + +H L+YP+FY+KLY LL PSIF K+RA+FF L
Sbjct: 301 DFLSAAYDIGGAISLSALNGLFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLA 360
Query: 248 DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN 307
+ L S LP YL AAFVK+L+RLS+ PP+ L+++ I NL+RRHPS L+HR
Sbjct: 361 NIFLSSTHLPVYLVAAFVKRLARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAA 420
Query: 308 ETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYC 367
+ +P D + EE +P + +A+ SSLWEI TL++H+
Sbjct: 421 D------------------------EPCDDPYVMEEEDPAQCHALESSLWEIKTLQNHHH 456
Query: 368 PPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 423
P VS+ + L+ + E ++ + + + E++ K VPL F T
Sbjct: 457 PDVSKAATMINEPLSAQ----EEDISELLELTTFELMERELKGEKKTVPLEFDMAT 508
>sp|Q6NRQ2|NOC41_XENLA Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-a
PE=2 SV=1
Length = 526
Score = 201 bits (512), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 142/231 (61%), Gaps = 25/231 (10%)
Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
K K F + W+ FL+ L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KDHKRVFERVWMIFLKHQLSVSLYKKVLLILHESILPHMSKPTLMIDFLTAAYDVGGAIS 316
Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
++AL+ LFIL+ QH LEYP+FY+KLY+LL PSIF K+RA+FF L + L S LP YL
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSIFHVKYRARFFHLANMFLSSTHLPVYLV 376
Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
AAF K+L+RL++ PP L+I+ I NL+RRHP+ L+HR
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAG-------------- 422
Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 372
D AT D + EE +P KS A+ SSLWE++ L+ HY V R
Sbjct: 423 DLAT-----------DPYIMEEQDPAKSQALESSLWELEVLQQHYHGDVVR 462
>sp|Q9BVI4|NOC4L_HUMAN Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1
SV=1
Length = 516
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 167/279 (59%), Gaps = 30/279 (10%)
Query: 142 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 201
K+ + F W++FL+ LP+ +YK+VL+ +H A++P L+ P ++ DFLTR+ D+GG +S
Sbjct: 246 KEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAILPQLAQPTLMIDFLTRACDLGGALS 305
Query: 202 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 261
++AL+ LFIL+ +H LEYP+FY KLY LL PS+F K+RA+FF L D L S LPAYL
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLV 365
Query: 262 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 321
AAF K+L+RL++ PP L+++ I NLLRRHP+ L+HR G E +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPE------------L 413
Query: 322 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 381
DA D +D E +P +S A+ SSLWE+ L+ HY P VS+ + L
Sbjct: 414 DA-------------DPYDPGEEDPAQSRALESSLWELQALQRHYHPEVSKAASVINQAL 460
Query: 382 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 419
++ E+++ + IF +++++ + VPL F
Sbjct: 461 SM----PEVSIAPLLELTAYEIFERDLKKKGPEPVPLEF 495
>sp|O94372|YG06_SCHPO Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC1604.06c PE=3 SV=1
Length = 485
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 32/284 (11%)
Query: 144 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 203
+K F ++W++ L LPL V++YK+VL +H+ VIPFL P +L DFLT +Y+ VS++
Sbjct: 226 IKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDAYNSHHAVSLL 285
Query: 204 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 263
AL+ LF LM H L+YP FY KLYALL ++ K R++FF LLD L S LPA L A+
Sbjct: 286 ALNGLFTLMISHNLDYPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLIAS 345
Query: 264 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 323
F+K+L+RL++ PP +++ I+N L+RHP+ +LHR
Sbjct: 346 FIKRLARLALTAPPGAIAIVIPFIYNCLQRHPTCMQMLHR-------------------- 385
Query: 324 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTV 383
SS + G D FD ++ +P+ + A+ SSLWE+ TL++HY ++ SL + ++
Sbjct: 386 ------SSAESG-DSFDFDQPDPLLTGAIESSLWELSTLQNHYYSNIA----SLASIMSQ 434
Query: 384 RAKTTEINVKDFCSGSYATIFGEEIRRRVK-QVPLAFYKTTPTS 426
+ ++DF YAT+ E+RR +K + P+ F K T S
Sbjct: 435 KFTKPRYELEDFLDHGYATMCDAELRRPLKNEPPIEFEKRTLAS 478
>sp|Q06512|NOC4_YEAST Nucleolar complex protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOC4 PE=1 SV=1
Length = 552
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 175/315 (55%), Gaps = 29/315 (9%)
Query: 143 KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------ 196
K KS F K W++ L L + YK +L+ LH+ +IP P L DFLT SY++
Sbjct: 252 KFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKN 311
Query: 197 GGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLL 256
GVV ++AL+ LF LM + LEYPNFY KLY ++ P + K+RA+FF L+D L S L
Sbjct: 312 AGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHL 371
Query: 257 PAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKA 316
A+L A+F+KKL+RL++ PPS + ++ I+NL+R+HP NC++ + N
Sbjct: 372 SAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHP--NCMIMLHNPAFISNPFQTP 429
Query: 317 EKEIVDAATVANISSIKPG-IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVL 375
++ VAN+ ++K +D FD ES+P ++A+ SSLWE+ +L HY P V+
Sbjct: 430 DQ-------VANLKTLKENYVDPFDVHESDPELTHALDSSLWELASLMEHYHPNVA---- 478
Query: 376 SLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAG 435
+L K N++DF +Y ++ E R++K +P ++ T++F + D
Sbjct: 479 TLAKIFAQPFKKLSYNMEDFLDWNYDSLLNAESSRKLKTLPTLEFEAF-TNVFDNED--- 534
Query: 436 WTFICDKTEENSNGN 450
+E +S GN
Sbjct: 535 -----GDSEASSQGN 544
>sp|P41843|YO93_CAEEL Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans
GN=T20B12.3 PE=3 SV=1
Length = 504
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 25/229 (10%)
Query: 144 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 203
+ + + W+ + + + +++ + + VI L P DF + +D ++
Sbjct: 190 ISTDYDNVWMAVMNGKISDKLTLKLIPYITQNVISKLKAPFKSADFFFKMFDKTDYHGIL 249
Query: 204 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 263
+L ++F L+++H EYP FY+K+Y+L PS+ + LLDS L S LP Y+ A+
Sbjct: 250 SLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLYMSQKESILTLLDSFLSSTHLPTYITAS 309
Query: 264 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 323
F+K+LSR +L P I+ LI NL+ RHP+ + L+HRE ++D
Sbjct: 310 FLKRLSRCLLLAPIDAQEPILGLIRNLVIRHPNCSELVHREVPQTLYDDP---------- 359
Query: 324 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 372
FD++E++ K+ A+ SSLWE+ L+ H+ V +
Sbjct: 360 ---------------FDNDETDLHKTRALESSLWEMKLLQCHWNQSVRK 393
>sp|Q03701|CEBPZ_HUMAN CCAAT/enhancer-binding protein zeta OS=Homo sapiens GN=CEBPZ PE=1
SV=3
Length = 1054
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 200 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELLDSCLRSPLLPA 258
SV AL LF +M +Y LY +L P + +A F L+ L++ ++
Sbjct: 522 TSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLMTCSKQAMFLNLVYKSLKADIVLR 581
Query: 259 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLL--HREDGNETH----ND 312
+ A FVK+L +++ P + L+ +L+ P + L H E +E + ND
Sbjct: 582 RVKA-FVKRLLQVTCQQMPPFICGALYLVSEILKAKPGLRSQLDDHPESDDEENFIDAND 640
Query: 313 DSKAEK--------EIV-------------------DAATVANISSIKPG--IDHFDDEE 343
D EK EIV + A+ + ++K G ++ +D
Sbjct: 641 DEDMEKFTDADKETEIVKKLETEETVPETDVETKKPEVASWVHFDNLKGGKQLNKYDPFS 700
Query: 344 SNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
NP+ A +SLWE+ L H+ P V+ F ++
Sbjct: 701 RNPLFCGAENTSLWELKKLSVHFHPSVALFAKTI 734
>sp|Q5R952|NOC3L_PONAB Nucleolar complex protein 3 homolog OS=Pongo abelii GN=NOC3L PE=2
SV=1
Length = 800
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 40/215 (18%)
Query: 173 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 228
H + F + +++ L S D+ S+ + + F +++ G ++ FY LY
Sbjct: 527 HLINVEFFDDLLVVLHTLIESGDLSYKESLHCVQTAFHILSGQGDVLNIDPMKFYTHLYK 586
Query: 229 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 282
L A + E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 587 TLFK--LHAGATNEGVEIVLQCLDVMLTKRRKQVSQQRALAFIKRLCTLALHVLPNSSIG 644
Query: 283 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 342
I+A L+ P + LL DS+++ G F E
Sbjct: 645 ILATTRILMHTFPKTDLLL-----------DSESQ-----------------GSGVFLPE 676
Query: 343 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
P NA ++LWE+ LR HY P V RF + L
Sbjct: 677 LDEPEYCNAQNTALWELHALRRHYHPIVQRFAVHL 711
>sp|Q07896|NOC3_YEAST Nucleolar complex-associated protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NOC3 PE=1 SV=1
Length = 663
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 27/117 (23%)
Query: 261 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 320
A AF K+L P ++ I+ I L+ R+P I+ L ED
Sbjct: 565 ATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPEISGLYSSED--------------- 609
Query: 321 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
+ G HF E NP +SN ++LW+ L HYCP V++ + SL
Sbjct: 610 ------------RIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSL 654
>sp|P53569|CEBPZ_MOUSE CCAAT/enhancer-binding protein zeta OS=Mus musculus GN=Cebpz PE=2
SV=2
Length = 1052
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 38/215 (17%)
Query: 200 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELLDSCLRSPLLPA 258
SV AL LF +M +Y LY +L P + +A F L+ L++ ++
Sbjct: 522 TSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLTTCSKQAMFLNLIYKSLKADIMLR 581
Query: 259 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLL--HREDGNETHND---- 312
+ A FVK+L +++ P + L+ +L+ P + L H E E D
Sbjct: 582 RVKA-FVKRLLQVTCTQMPPFICGALYLVSEILKAKPDLRSQLDDHPESDEENFVDVGDD 640
Query: 313 ----------------------------DSKAEKEIVDAATVANISSIKPG--IDHFDDE 342
+S AE E AA+ + ++K G I +D
Sbjct: 641 SDDEKFTDADKGTATDAVKEVESKETEPESSAEAEKPKAASWVHFDNLKGGKQIKTYDPF 700
Query: 343 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
NP+ A ++LWE+ L H+ P V+ F ++
Sbjct: 701 SRNPLFCGAENTTLWELKKLSEHFHPSVALFAKTI 735
>sp|Q8WTT2|NOC3L_HUMAN Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1
SV=1
Length = 800
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 40/215 (18%)
Query: 173 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 228
H + F + +++ L S D+ S+ + + F +++ G ++ FY LY
Sbjct: 527 HLINVEFFDDLLVVLHTLIESGDLSYQESLHCVQTAFHILSGQGDVLNIDPLKFYTHLYK 586
Query: 229 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 282
L A + E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 587 TLFK--LHAGATNEGVEIVLQCLDVMLTKRRKQVSQQRALAFIKRLCTLALHVLPNSSIG 644
Query: 283 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 342
I+A L+ P + LL DS+++ G F E
Sbjct: 645 ILATTRILMHTFPKTDLLL-----------DSESQ-----------------GSGVFLPE 676
Query: 343 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
P NA ++LWE+ LR HY P V RF L
Sbjct: 677 LDEPEYCNAQNTALWELHALRRHYHPIVQRFAAHL 711
>sp|Q91Y26|NOC3L_CRIGR Nucleolar complex protein 3 homolog OS=Cricetulus griseus GN=NOC3L
PE=2 SV=1
Length = 800
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 40/215 (18%)
Query: 173 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 228
H + F + +++ L S D+ S+ + + F +++ G ++ FY LY
Sbjct: 527 HLINVEFFDDLLVVLHTLIESGDLSYQESLHCVQTAFHILSGQGDVLNIDPMKFYTHLYK 586
Query: 229 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 282
L A E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 587 TLFK--LHAGATNDGIEIVLHCLDVMLSKRRKQVSHQRALAFIKRLCTLALQVLPNSSIG 644
Query: 283 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 342
++A L+ P + LL NE+ G F E
Sbjct: 645 LLATTRILMHTFPRTDLLL----DNESQ------------------------GSGVFLPE 676
Query: 343 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
P NA ++LWE+ LR HY P V RF + L
Sbjct: 677 LEEPEYCNAQNTALWELHALRRHYHPVVQRFAVHL 711
>sp|Q8VI84|NOC3L_MOUSE Nucleolar complex protein 3 homolog OS=Mus musculus GN=Noc3l PE=2
SV=2
Length = 807
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 40/215 (18%)
Query: 173 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 228
H + F + +++ L S ++ S+ + + F +++ G ++ FY LY
Sbjct: 526 HLINVEFFDDLLVVLHTLIESGELSYQESLHCVQTAFHILSGQGDVLNIDPMKFYTHLYK 585
Query: 229 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 282
L A E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 586 TLF--TLHAGATNDGIEIVLHCLDVMLSKRRKQVSHQRALAFIKRLCTLALQVLPNSSIG 643
Query: 283 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 342
++A L+ P + LL NE+ G F E
Sbjct: 644 LLATTRILMHTFPRTDLLL----DNESQ------------------------GSGVFLPE 675
Query: 343 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
P NA ++LWE+ TLR HY P V RF L
Sbjct: 676 LEEPEYCNAQNTALWELHTLRRHYHPIVRRFAAHL 710
>sp|Q12176|MAK21_YEAST Ribosome biogenesis protein MAK21 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MAK21 PE=1 SV=1
Length = 1025
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 200 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELLDSCLRSPLLPA 258
S+ AL + + + L +Y LY +L P + + + + LL L+ L
Sbjct: 596 TSIQALVLINQVTVKAKLNSDRYYRTLYESLFDPRLVNSSKQGIYLNLLYKSLKQDALNV 655
Query: 259 YLAAAFVKKLSRLSILVPPSGALV-IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAE 317
AFVK++ ++ G + L+ L + P I LL + + D++ E
Sbjct: 656 ERVEAFVKRILQVCSHWLNVGTITGFFFLLIQLAKTVPQIKNLLTNTPVDYEYESDAEEE 715
Query: 318 KEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
+ D IK +D + +P +NA +SSLWEI+ +H+ P V +
Sbjct: 716 QGDKD---------IKRK--EYDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYA--- 761
Query: 378 ENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDS 431
+ V +T +I D + + + R KQ A + LFS S
Sbjct: 762 --NAYVTGETEQIAKPDLGLFTLSHFLDRFVYRSAKQTNTARGTSIMQPLFSGS 813
>sp|O36021|YEK9_SCHPO Uncharacterized protein C4F10.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4F10.09c PE=1 SV=1
Length = 860
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 29/183 (15%)
Query: 222 FYEKLY-ALLVPSIFMAKHRAKFFELL-DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSG 279
+Y+ LY +LL P + + ++ + LL S + +P AF+K++ ++S P
Sbjct: 431 YYKSLYESLLDPRLTTSSKQSLYLNLLYKSLIIDNNIPR--VRAFIKRMVQVSAWQQPPL 488
Query: 280 ALVIMALIHNLL-----RRHPSINCLLHREDGNETH-----NDDSKAEKEIVD------- 322
+ ++H L+ R N +H DG+E +D +E + VD
Sbjct: 489 VTGLFHVMHQLVIATTALRSMFTNAEIHDFDGDEEEVFKDVEEDDVSEDQKVDSDKDGKL 548
Query: 323 -------AATVANIS-SIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFV 374
A V N+S S K +D + +P SNA S LWEI +H+ P VS
Sbjct: 549 SDKQSHSAYVVGNVSVSTKKEHLSYDGRKRDPQYSNADGSCLWEIHPFLNHFHPTVSLLA 608
Query: 375 LSL 377
SL
Sbjct: 609 KSL 611
>sp|Q5XGZ8|NOC3L_XENLA Nucleolar complex protein 3 homolog OS=Xenopus laevis GN=noc3l PE=2
SV=1
Length = 795
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 28/117 (23%)
Query: 261 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 320
A AF+K+LS L++ V P ++ I++ L++ P + LL + DS+
Sbjct: 621 ALAFIKRLSTLALHVLPDSSIGILSTNRVLMQTFPKTDLLL---------DSDSQGS--- 668
Query: 321 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 377
GI + E P NA S+LWE+ TL HY P V F L
Sbjct: 669 --------------GI--YLPELDEPEYCNAQNSALWELHTLMRHYHPVVQIFAAHL 709
>sp|P91136|NOC3L_CAEEL Nucleolar complex protein 3 homolog OS=Caenorhabditis elegans
GN=C37H5.5 PE=3 SV=3
Length = 778
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 173 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 228
H I F + + + + ++ ++ + + ++++F++++ G ++ FY Y
Sbjct: 513 HLLSIEFYEDIVSTMENMVQNENLKSLDQLHCINTVFVILSGDGQLLNIDPSKFYRLAYR 572
Query: 229 LL--VP----------SIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVP 276
+L +P I MA AK E + +R +P AAFVK+L ++ ++
Sbjct: 573 VLNHLPFEKRPEQRKNQIIMA---AKTLETM-LVIRRKAVPLSRVAAFVKRLLSIATVLD 628
Query: 277 PSGALVIMALIHNLLRRHPSINCLLHREDG 306
AL I++L+ +L HP ++ ++ E+G
Sbjct: 629 DFPALCIVSLVRSLFIAHPKLSSMIEDEEG 658
>sp|Q8EC50|EX7L_SHEON Exodeoxyribonuclease 7 large subunit OS=Shewanella oneidensis
(strain MR-1) GN=xseA PE=3 SV=1
Length = 445
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRS-PLLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ FE L L + L A A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAALGLFAADTKRALPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGENADINICQAINIAN 192
>sp|Q61LN7|NOC3L_CAEBR Nucleolar complex protein 3 homolog OS=Caenorhabditis briggsae
GN=CBG08826 PE=3 SV=1
Length = 779
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 20/150 (13%)
Query: 173 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 228
H I F + + + + ++ ++ + + ++++F++++ G ++ FY Y
Sbjct: 514 HLLSIEFYEDIVSTMENMVQNENLKPLDQLHCINTVFVILSGDGQLLNIDPSKFYRLAYR 573
Query: 229 LL--VP----------SIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVP 276
+L P I MA AK E + R +P AAFVK+L ++ ++
Sbjct: 574 VLNHFPFEKRPEQRKNQIVMA---AKTLETM-LVTRRKAVPLSRVAAFVKRLLSIATVLD 629
Query: 277 PSGALVIMALIHNLLRRHPSINCLLHREDG 306
AL I++L+ +L HP ++ ++ E+G
Sbjct: 630 DFPALCIVSLVRSLFIAHPKLSSMIEDEEG 659
>sp|Q0HKV4|EX7L_SHESM Exodeoxyribonuclease 7 large subunit OS=Shewanella sp. (strain
MR-4) GN=xseA PE=3 SV=1
Length = 448
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ FE L L + L A K + R+ ++ PSGA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAAQGLFAADTKRQLPKNIQRIGVITSPSGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGESADLNICQAINIAN 192
>sp|A0KUK0|EX7L_SHESA Exodeoxyribonuclease 7 large subunit OS=Shewanella sp. (strain
ANA-3) GN=xseA PE=3 SV=1
Length = 448
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ FE L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAAQGLFAADTKRQLPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGENADMNICQAINIAN 192
>sp|Q0HX52|EX7L_SHESR Exodeoxyribonuclease 7 large subunit OS=Shewanella sp. (strain
MR-7) GN=xseA PE=3 SV=1
Length = 448
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ FE L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAAQGLFAADTKRQLPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGESADLNICQAINIAN 192
>sp|Q6DRN3|NOC3L_DANRE Nucleolar complex protein 3 homolog OS=Danio rerio GN=noc3l PE=2
SV=1
Length = 800
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 54/178 (30%)
Query: 261 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 320
A AF+K+L+ +++ + P + I+A L++ P + LL NET
Sbjct: 623 AQAFLKRLNTVALHLLPDSCVGILAANRMLMQTFPKCDILL----DNETQ---------- 668
Query: 321 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND 380
G + E P N ++LWE+ L+ HY P V +F L
Sbjct: 669 --------------GSGVYLPELDVPEYCNPQNTALWELHLLKSHYHPVVRKFAAHL--- 711
Query: 381 LTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTF 438
++ +E GS A G E+ RR +P LF D +F
Sbjct: 712 --MKGAPSE--------GSGA--LGVELSRR-----------SPLQLFEDYSVKDMSF 746
>sp|A6WQP2|EX7L_SHEB8 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS185) GN=xseA PE=3 SV=1
Length = 448
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRPLPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
>sp|B8E9T2|EX7L_SHEB2 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS223) GN=xseA PE=3 SV=1
Length = 448
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRRLPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
>sp|A9KWW8|EX7L_SHEB9 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS195) GN=xseA PE=3 SV=1
Length = 448
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRPLPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
>sp|A3D6V4|EX7L_SHEB5 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS155 / ATCC BAA-1091) GN=xseA PE=3 SV=1
Length = 448
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 283
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRPLPKNIQRIGVITSPTGA-AI 152
Query: 284 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 328
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,545,677
Number of Sequences: 539616
Number of extensions: 6655984
Number of successful extensions: 20969
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 20826
Number of HSP's gapped (non-prelim): 165
length of query: 475
length of database: 191,569,459
effective HSP length: 121
effective length of query: 354
effective length of database: 126,275,923
effective search space: 44701676742
effective search space used: 44701676742
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)