BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011902
(475 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LVS3|PP422_ARATH Pentatricopeptide repeat-containing protein At5g47360
OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1
Length = 477
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/473 (53%), Positives = 339/473 (71%), Gaps = 6/473 (1%)
Query: 1 MPRFSLSRILSSSVNIKNSKIFALHF-TTASPAERFYTHLQKNPNNIEKTLATVKAKLDS 59
MP +SR++S S+ + SKI AL F TT S AER Y LQ +N+EK LA+ +LDS
Sbjct: 1 MPNSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDS 60
Query: 60 TCVIEVLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEA 119
+C+ EVL RC P+Q Q G+RFFIWA SS+RHS++MY +AC++ +I+ P +I V+E+
Sbjct: 61 SCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIES 120
Query: 120 YKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGD 179
Y++E C V+VK M+++ LC +A LA+EA+WVLRK PEF++ DT+ YN VIRLF +KGD
Sbjct: 121 YRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGD 180
Query: 180 MIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSA 239
+ AD L+K M + LYPD+ITY SMI G+CNAG+++DA L K M +H C N V YS
Sbjct: 181 LNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSR 240
Query: 240 LLDGICRLGSMERALELLGEMEKE--GGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRM 297
+L+G+C+ G MERALELL EMEKE GG SPN VTYT VIQ FC K ++EAL +LDRM
Sbjct: 241 ILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300
Query: 298 EALGCAPNRVTISTLIKGFCVEGNLD--EAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
GC PNRVT LI+G +E + D +LIDK+V G VS C+SS V L+R K
Sbjct: 301 GNRGCMPNRVTACVLIQGV-LENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMK 359
Query: 356 RLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI 415
R +EAEK+F ML GV+PDGLACS + RELCL + L+ F LY++IEK S++DSDI
Sbjct: 360 RWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDI 419
Query: 416 HSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEELIT 468
H+VLLLGLC++ +S EAAKLA+ ML K++ L+ +V+KI+E LKK+GDE+L++
Sbjct: 420 HAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLMS 472
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 211/431 (48%), Gaps = 19/431 (4%)
Query: 29 ASPAERFYTHLQKNPNNIEK-TLATVKAKLD--STCVIEVLHRCFPSQSQMGIRFFIWAA 85
A E+ Y L+ + + + K LA ++ +D +I VL RC +G RFF+WA
Sbjct: 64 AGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRC-GDAGNLGYRFFLWAT 122
Query: 86 LQSSYRHSSFMYNRACE-----MSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCE 140
Q Y HS C+ +S+++Q ++ + E K ++ ++ V+
Sbjct: 123 KQPGYFHSY----EVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFA 178
Query: 141 KARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDII 200
A + +A+ VL +MP++ L PD ++ ++ C+ G + A ++ + M P++
Sbjct: 179 SANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLR 237
Query: 201 TYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM 260
+ S++ G+C G+L +A + MK G ++V ++ LL G G M A +L+ +M
Sbjct: 238 YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM 297
Query: 261 EKEGGDCSPNVVTYTSVIQIFC-GKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVE 319
K G + PNV YT +IQ C + M EA+ + ME GC + VT + LI GFC
Sbjct: 298 RKRGFE--PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 320 GNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLAC 379
G +D+ Y ++D + G + S Y ++V + ++ +E +L KM G PD L
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 380 SVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
+V+IR C G+V E L+ ++E G VD+ + +++ G + +EA + M
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFV--IMINGFTSQGFLIEACNHFKEM 473
Query: 440 LKKRIWLQGPY 450
+ + I+ Y
Sbjct: 474 VSRGIFSAPQY 484
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 101 CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDL 160
C+ I + S++ D+ +++G + S I EK E + ++ KM
Sbjct: 353 CKWGMIDKGYSVLDDM----RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 161 RPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACG 220
PD +IYN VIRL C+ G++ A L M L P + T+V MI GF + G L +AC
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 221 LFKVMKRHG--CAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVI 278
FK M G A +LL+ + R +E A ++ + + C NV +T I
Sbjct: 469 HFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWI 528
Query: 279 QIFCGKGMMKEALGI-LDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGS 337
KG +KEA LD ME + P T + L+KG N A ++ +KVV S
Sbjct: 529 HALYAKGHVKEACSYCLDMME-MDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMAS 587
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 164/288 (56%), Gaps = 4/288 (1%)
Query: 148 AMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIK 207
AM +LRKM E +++ D + Y+ +I C+ G + A L M + DIITY ++I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 208 GFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDC 267
GFCNAGR +D L + M + + N+V +S L+D + G + A +LL EM + G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG--I 364
Query: 268 SPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQ 327
+PN +TY S+I FC + ++EA+ ++D M + GC P+ +T + LI G+C +D+ +
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 328 LIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
L ++ G +++ Y++LV ++ +L+ A+KLF +M++ V+PD ++ +++ LC
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 388 LGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
G++ + ++ IEK +D I+ +++ G+C + +A L
Sbjct: 485 DNGELEKALEIFGKIEKSKM--ELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 178/394 (45%), Gaps = 39/394 (9%)
Query: 86 LQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLA 145
+QS + +NR + +++ + + + +G S+ + ++ N + R
Sbjct: 80 IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL 139
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
+ A + K+ + PDT+I+N ++ C + + A EL+ M + P +IT ++
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAAN-------------------------------- 233
+ G C G++ DA L M G N
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 234 ---LVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEA 290
V YS ++DG+C+ GS++ A L EME +G +++TY ++I FC G +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG--FKADIITYNTLIGGFCNAGRWDDG 317
Query: 291 LGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVE 350
+L M +PN VT S LI F EG L EA QL+ +++ G + Y+SL+
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 351 LVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSS 410
+ RL+EA ++ M++ G PD + +++I C ++ +G L+ ++ G +++
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 411 VDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+ ++ L+ G C+ A KL + M+ +R+
Sbjct: 438 TVT--YNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA +L++M + + P+TI YN++I FC++ + A +++ M PDI+T+ +I
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
G+C A R++D LF+ M G AN V Y+ L+ G C+ G +E A +L EM
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR--R 468
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
P++V+Y ++ C G +++AL I ++E + +I G C +D+A+
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
L + G Y+ ++ EL R L +A+ LF KM G PD L +++IR
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDS 413
L E+++ GF + V +
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVST 615
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 35/331 (10%)
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVS 204
A++A+ + R M + P I +N + + L K M + I T
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 205 MIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
MI FC +L A + + G + V ++ LL+G+C + ALEL+ M + G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 265 -------------GDC--------------------SPNVVTYTSVIQIFCGKGMMKEAL 291
G C PN VTY V+ + C G A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 292 GILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVEL 351
+L +ME + V S +I G C +G+LD A+ L +++ G + Y++L+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 352 VRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSV 411
R + KL M+ + P+ + SV+I G++ E L +++ + G +
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI--AP 366
Query: 412 DSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
++ ++ L+ G C++N EA ++ M+ K
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 122/255 (47%), Gaps = 10/255 (3%)
Query: 86 LQSSYRHSSFMYNRA----CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEK 141
+Q ++ YN C+ +R+++ I +V+ +GC + ++ N K
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEE----AIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 142 ARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIIT 201
A ++ + + R+M + +T+ YN +++ FC+ G + A +L + M + PDI++
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 202 YVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEME 261
Y ++ G C+ G LE A +F +++ ++ Y ++ G+C ++ A +L +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 262 KEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGN 321
+G + Y +I C K + +A + +M G AP+ +T + LI+ + +
Sbjct: 536 LKG--VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 322 LDEAYQLIDKVVAGG 336
A +LI+++ + G
Sbjct: 594 ATTAAELIEEMKSSG 608
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 218/445 (48%), Gaps = 16/445 (3%)
Query: 11 SSSVNIKNSKIFALHFTTASPAERFYTHLQKNPNNIEK---TLATVKAKLDSTCVIEVLH 67
S + KNSK + AS E+ Y L+K + + K L +L + VL+
Sbjct: 66 SHNDRTKNSK----YDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLN 121
Query: 68 RCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACE-MSRIKQNPSIIIDVVEAYKEEGCV 126
RC +G RFF+WAA Q Y HS +Y + +S+++Q ++ + E KE +
Sbjct: 122 RC-GDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQL 180
Query: 127 VSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADEL 186
+ ++ V+ A + +A+ VL +MP+F PD ++ ++ C+ G + A +L
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 187 MKGMGLIDLYP-DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGIC 245
+ M + +P ++ + S++ G+C G++ +A + M G ++V Y+ LL G
Sbjct: 241 FEDMRM--RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 246 RLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPN 305
G M A +LL +M + G + PN YT +IQ C M+EA+ + ME C +
Sbjct: 299 NAGKMADAYDLLRDMRRRGFE--PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 306 RVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFS 365
VT + L+ GFC G +D+ Y ++D ++ G + S Y ++V + + +E +L
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 366 KMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCR 425
KM PD +V+IR C G+V E L+ ++E+ G VD+ + +++ GL
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFV--IMINGLAS 474
Query: 426 KNHSVEAAKLARFMLKKRIWLQGPY 450
+ +EA+ + M+ + ++ Y
Sbjct: 475 QGCLLEASDHFKEMVTRGLFSVSQY 499
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 140 EKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDI 199
EK E + ++ KM + + PD IYN VIRL C+ G++ A L M L P +
Sbjct: 403 EKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGV 462
Query: 200 ITYVSMIKGFCNAGRLEDACGLFKVMKRHG--CAANLVAYSALLDGICRLGSMERALELL 257
T+V MI G + G L +A FK M G + LL+ + + +E A ++
Sbjct: 463 DTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW 522
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
+ +G C NV+++T I KG KEA M + P T + L+KG
Sbjct: 523 SCITSKGA-CELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLK 581
Query: 318 VEGNLDEAYQLIDKV 332
N + A ++ +KV
Sbjct: 582 KLYNREFAGEITEKV 596
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 176/348 (50%), Gaps = 10/348 (2%)
Query: 96 MYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMK-VIFNLCEKARLANEAMWVLRK 154
+ N C+ +K I++++ +EG V VI LC+ + EA+ VL +
Sbjct: 301 LVNGLCKAGHVKH----AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV-KEAVEVLDQ 355
Query: 155 MPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGR 214
M D P+T+ YN +I C++ + A EL + + + PD+ T+ S+I+G C
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 215 LEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTY 274
A LF+ M+ GC + Y+ L+D +C G ++ AL +L +ME G C+ +V+TY
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG--CARSVITY 473
Query: 275 TSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVA 334
++I FC +EA I D ME G + N VT +TLI G C +++A QL+D+++
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 335 GGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLE 394
G Y+SL+ R +K+A + M ++G +PD + +I LC G+V
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 395 GFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
L I+ G ++ ++ ++ GL RK + EA L R ML++
Sbjct: 594 ASKLLRSIQMKGI--NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 168/327 (51%), Gaps = 9/327 (2%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
++ LC KA A+ ++ M + PD YN+VI C+ G++ A E++ M
Sbjct: 301 LVNGLC-KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
D P+ +TY ++I C ++E+A L +V+ G ++ +++L+ G+C + A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
+EL EM +G C P+ TY +I C KG + EAL +L +ME GCA + +T +TLI
Sbjct: 420 MELFEEMRSKG--CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
GFC EA ++ D++ G + Y++L+ L +++R+++A +L +M+ G K
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRKNHSVE 431
PD + ++ C GG + + DI + + + DI + L+ GLC+
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKA----ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 432 AAKLARFMLKKRIWLQGPYVDKIVEHL 458
A+KL R + K I L + +++ L
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 16/292 (5%)
Query: 100 ACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFD 159
A E++R+ + I+ DV C + +I LC R AM + +M
Sbjct: 384 ATELARVLTSKGILPDV--------CTFN----SLIQGLC-LTRNHRVAMELFEEMRSKG 430
Query: 160 LRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDAC 219
PD YN +I C KG + A ++K M L +ITY ++I GFC A + +A
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 220 GLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQ 279
+F M+ HG + N V Y+ L+DG+C+ +E A +L+ +M EG P+ TY S++
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ--KPDKYTYNSLLT 548
Query: 280 IFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVS 339
FC G +K+A I+ M + GC P+ VT TLI G C G ++ A +L+ + G
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 340 SGGCYSSLVVELVRTKRLKEAEKLFSKMLASG-VKPDGLACSVMIRELCLGG 390
+ Y+ ++ L R ++ EA LF +ML PD ++ ++ R LC GG
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 36/316 (11%)
Query: 154 KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAG 213
KM + ++PD +N +I+ C + A +++ M L PD T+ ++++G+ G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG-------- 265
L+ A + + M GC+ + V+ + ++ G C+ G +E AL + EM + G
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 266 --------------------------DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEA 299
P+V TY SVI C G +KEA+ +LD+M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 300 LGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKE 359
C+PN VT +TLI C E ++EA +L + + G + ++SL+ L T+ +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 360 AEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVL 419
A +LF +M + G +PD +++I LC G++ E + + +E G SV + ++ L
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT--YNTL 476
Query: 420 LLGLCRKNHSVEAAKL 435
+ G C+ N + EA ++
Sbjct: 477 IDGFCKANKTREAEEI 492
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 124 GCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAA 183
GC SV + + KA EA + +M + +++ YN +I C+ + A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 184 DELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDG 243
+LM M + PD TY S++ FC G ++ A + + M +GC ++V Y L+ G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 244 ICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRM-EALGC 302
+C+ G +E A +LL ++ +G + +P+ Y VIQ K EA+ + M E
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 303 APNRVTISTLIKGFCVEGN-LDEAYQLIDKVVAGGSVSSGGCYSSL 347
P+ V+ + +G C G + EA + +++ G V +SSL
Sbjct: 643 PPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE---FSSL 685
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 158/315 (50%), Gaps = 35/315 (11%)
Query: 154 KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAG 213
+M D+ PD + Y +I FC+ GDM+ A +L M L PD +T+ +I G+C AG
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEK----------- 262
++DA + M + GC+ N+V Y+ L+DG+C+ G ++ A ELL EM K
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 263 ----------------------EGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAL 300
E + + VTYT+++ +C G M +A IL M
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 301 GCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEA 360
G P VT + L+ GFC+ G L++ +L++ ++A G + ++SLV + LK A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 361 EKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLL 420
++ M + GV PDG +++ C + E + L+++++ GF SV + +SVL+
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST--YSVLI 673
Query: 421 LGLCRKNHSVEAAKL 435
G ++ +EA ++
Sbjct: 674 KGFLKRKKFLEAREV 688
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 144/258 (55%), Gaps = 3/258 (1%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
LC +LA EA +M + PDT++Y +I FC++GD+ AA + M D+ P
Sbjct: 326 LCRICKLA-EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
D++TY ++I GFC G + +A LF M G + V ++ L++G C+ G M+ A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
M + G CSPNVVTYT++I C +G + A +L M +G PN T ++++ G C
Sbjct: 445 NHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
GN++EA +L+ + A G + Y++L+ ++ + +A+++ +ML G++P +
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 378 ACSVMIRELCLGGQVLEG 395
+V++ CL G + +G
Sbjct: 563 TFNVLMNGFCLHGMLEDG 580
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 3/279 (1%)
Query: 128 SVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELM 187
SV ++I C KA +A V M + P+ + Y +I C++GD+ +A+EL+
Sbjct: 421 SVTFTELINGYC-KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 188 KGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRL 247
M I L P+I TY S++ G C +G +E+A L + G A+ V Y+ L+D C+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
G M++A E+L EM +G P +VT+ ++ FC GM+++ +L+ M A G APN
Sbjct: 540 GEMDKAQEILKEMLGKG--LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKM 367
T ++L+K +C+ NL A + + + G G Y +LV + + +KEA LF +M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
G SV+I+ + LE +++ + + G
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 40/363 (11%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLF 174
V E G V+SV V L + A+ V R+ PE + + YN VI
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 256
Query: 175 CEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAAN- 233
C+ G + A L+ M L PD+I+Y +++ G+C G L+ L +VMKR G N
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 234 ----------------------------------LVAYSALLDGICRLGSMERALELLGE 259
V Y+ L+DG C+ G + A + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 260 MEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVE 319
M D +P+V+TYT++I FC G M EA + M G P+ VT + LI G+C
Sbjct: 377 MHSR--DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 320 GNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLAC 379
G++ +A+++ + ++ G + Y++L+ L + L A +L +M G++P+
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 380 SVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
+ ++ LC G + E L + E G + D+ ++ L+ C+ +A ++ + M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGL--NADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 440 LKK 442
L K
Sbjct: 553 LGK 555
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 130/257 (50%), Gaps = 8/257 (3%)
Query: 122 EEGCVVSVKMMKVIFN-LCEKARL--ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKG 178
+ GC +V + + LC++ L ANE +L +M + L+P+ YN+++ C+ G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANE---LLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 179 DMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYS 238
++ A +L+ L D +TY +++ +C +G ++ A + K M G +V ++
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 239 ALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRME 298
L++G C G +E +LL M +G +PN T+ S+++ +C + +K A I M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKG--IAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 299 ALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLK 358
+ G P+ T L+KG C N+ EA+ L ++ G S YS L+ ++ K+
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 359 EAEKLFSKMLASGVKPD 375
EA ++F +M G+ D
Sbjct: 684 EAREVFDQMRREGLAAD 700
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 8/285 (2%)
Query: 163 DTIIYNNVIRLFCEKGDMIAADELMKGMGLI-----DLYPDIITYVSMIKGFCNAGRLED 217
D + ++I F E+ + D ++ L+ D D + + + G L +
Sbjct: 134 DLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLRE 193
Query: 218 ACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSV 277
A +F+ M +G ++ + + L + + ++ E G C NV +Y V
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW-NVASYNIV 252
Query: 278 IQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGS 337
I C G +KEA +L ME G P+ ++ ST++ G+C G LD+ ++LI+ + G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 338 VSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFC 397
+ Y S++ L R +L EAE+ FS+M+ G+ PD + + +I C G +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 398 LYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
+ ++ V + ++ ++ G C+ VEA KL M K
Sbjct: 373 FFYEMHSRDITPDVLT--YTAIISGFCQIGDMVEAGKLFHEMFCK 415
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
++A +L++M L+P + +N ++ FC G + ++L+ M + P+ T+ S+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
+K +C L+ A ++K M G + Y L+ G C+ +M+ A L EM+ +G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG- 661
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNR 306
S +V TY+ +I+ F + EA + D+M G A ++
Sbjct: 662 -FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 35/383 (9%)
Query: 86 LQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLA 145
L+S + F YN N + + + + + +GC+ +V + + K R
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
++ +LR M L P+ I YN VI C +G M ++ M D +TY ++
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG- 264
IKG+C G A + M RHG +++ Y++L+ +C+ G+M RA+E L +M G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 265 --------------------------------GDCSPNVVTYTSVIQIFCGKGMMKEALG 292
SP+VVTY ++I C G M++A+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+L+ M+ G +P+ V+ ST++ GFC ++DEA ++ ++V G YSSL+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD 412
+R KEA L+ +ML G+ PD + +I C+ G + + L+ ++ + G L V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 413 SDIHSVLLLGLCRKNHSVEAAKL 435
+ +SVL+ GL +++ + EA +L
Sbjct: 557 T--YSVLINGLNKQSRTREAKRL 577
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 166/350 (47%), Gaps = 59/350 (16%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
+ +I ++C KA N AM L +M L P+ Y ++ F +KG M A +++
Sbjct: 346 ITYTSLIHSMC-KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
M P ++TY ++I G C G++EDA + + MK G + ++V+YS +L G CR
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
++ AL + EM ++G P+ +TY+S+IQ FC + KEA + + M +G P+ T
Sbjct: 465 DVDEALRVKREMVEKG--IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKL----- 363
+ LI +C+EG+L++A QL +++V G + YS L+ L + R +EA++L
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 364 ---------------------------------------------FSKMLASGVKPDGLA 378
F ML KPDG A
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 379 CSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNH 428
++MI C G + + + LY+++ K GFL +H+V ++ L + H
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFL------LHTVTVIALVKALH 686
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 155/294 (52%), Gaps = 4/294 (1%)
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
V ++M E + P+ YN +IR FC G++ A L M P+++TY ++I G+C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
+++D L + M G NL++Y+ +++G+CR G M+ +L EM + G S +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG--YSLD 309
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
VTY ++I+ +C +G +AL + M G P+ +T ++LI C GN++ A + +D
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G + Y++LV + + EA ++ +M +G P + + +I C+ G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
++ + + ED+++ G V S +S +L G CR EA ++ R M++K I
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVS--YSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 133/263 (50%), Gaps = 17/263 (6%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
+A+ VL M E L PD + Y+ V+ FC D+ A + + M + PD ITY S+I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
+GFC R ++AC L++ M R G + Y+AL++ C G +E+AL+L EM ++G
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG-- 550
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI------------- 313
P+VVTY+ +I + +EA +L ++ P+ VT TLI
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 314 --KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASG 371
KGFC++G + EA Q+ + ++ G Y+ ++ R +++A L+ +M+ SG
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 372 VKPDGLACSVMIRELCLGGQVLE 394
+ +++ L G+V E
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNE 693
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 17/272 (6%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRL 173
I V+E KE+G V + + ++ +EA+ V R+M E ++PDTI Y+++I+
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 174 FCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAAN 233
FCE+ A +L + M + L PD TY ++I +C G LE A L M G +
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 234 LVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTY---------------TSVI 278
+V YS L++G+ + A LL ++ E + P+ VTY S+I
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYE--ESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 279 QIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSV 338
+ FC KGMM EA + + M P+ + +I G C G++ +AY L ++V G +
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 339 SSGGCYSSLVVELVRTKRLKEAEKLFSKMLAS 370
+LV L + ++ E + +L S
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 158/288 (54%), Gaps = 4/288 (1%)
Query: 148 AMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIK 207
AM +LRKM E ++ D + Y+ +I C+ G + A L M + DII Y ++I+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 208 GFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDC 267
GFC AGR +D L + M + ++VA+SAL+D + G + A EL EM + G
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG--I 348
Query: 268 SPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQ 327
SP+ VTYTS+I FC + + +A +LD M + GC PN T + LI G+C +D+ +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 328 LIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
L K+ G V+ Y++L+ +L+ A++LF +M++ V+PD ++ +++ LC
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 388 LGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
G+ + ++E IEK +D I+++++ G+C + +A L
Sbjct: 469 DNGEPEKALEIFEKIEKSKM--ELDIGIYNIIIHGMCNASKVDDAWDL 514
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 150/302 (49%), Gaps = 5/302 (1%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I C R ++ +LR M + + PD + ++ +I F ++G + A+EL K M
Sbjct: 288 LIRGFCYAGRW-DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
+ PD +TY S+I GFC +L+ A + +M GC N+ ++ L++G C+ ++
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
LEL +M G + VTY ++IQ FC G ++ A + M + P+ V+ L+
Sbjct: 407 LELFRKMSLRG--VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G C G ++A ++ +K+ G Y+ ++ + ++ +A LF + GVK
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAA 433
PD ++MI LC G + E L+ +E+ G S + +++L+ + + ++A
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG--HSPNGCTYNILIRAHLGEGDATKSA 582
Query: 434 KL 435
KL
Sbjct: 583 KL 584
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 157/312 (50%), Gaps = 5/312 (1%)
Query: 128 SVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELM 187
+VK +I LC+ L N A + +M + D IIY +IR FC G +L+
Sbjct: 247 AVKYSIIIDGLCKDGSLDN-AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 188 KGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRL 247
+ M + PD++ + ++I F G+L +A L K M + G + + V Y++L+DG C+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
+++A +L M +G C PN+ T+ +I +C ++ + L + +M G + V
Sbjct: 366 NQLDKANHMLDLMVSKG--CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKM 367
T +TLI+GFC G L+ A +L ++V+ Y L+ L ++A ++F K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKN 427
S ++ D +++I +C +V + + L+ + G V + +++++ GLC+K
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT--YNIMIGGLCKKG 541
Query: 428 HSVEAAKLARFM 439
EA L R M
Sbjct: 542 SLSEADLLFRKM 553
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 165/337 (48%), Gaps = 5/337 (1%)
Query: 103 MSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRP 162
++R KQ +++D+ + + +G ++ + ++ N C + R + A + K+ + P
Sbjct: 82 VARTKQY-DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140
Query: 163 DTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLF 222
DT+ ++ +I C +G + A EL+ M + P +IT +++ G C G++ DA L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 223 KVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFC 282
M G N V Y +L +C+ G A+ELL +ME+ + V Y+ +I C
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER--KIKLDAVKYSIIIDGLC 258
Query: 283 GKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGG 342
G + A + + ME G + + +TLI+GFC G D+ +L+ ++
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 343 CYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDI 402
+S+L+ V+ +L+EAE+L +M+ G+ PD + + +I C Q+ + + + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 403 EKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
G ++ + ++L+ G C+ N + +L R M
Sbjct: 379 VSKGCGPNIRT--FNILINGYCKANLIDDGLELFRKM 413
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA + ++M + + PDT+ Y ++I FC++ + A+ ++ M P+I T+ +I
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
G+C A ++D LF+ M G A+ V Y+ L+ G C LG +E A EL EM
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR--R 452
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
P++V+Y ++ C G ++AL I +++E + + +I G C +D+A+
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
L + G Y+ ++ L + L EA+ LF KM G P+G +++IR
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDS 413
G + L E+I++ GF SVD+
Sbjct: 573 LGEGDATKSAKLIEEIKRCGF--SVDA 597
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P +I + + + + L K M+ G A NL S +++ CR + A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
+G++ K G + P+ VT++++I C +G + EAL ++DRM +G P +T++ L+ G
Sbjct: 130 MGKIIKLGYE--PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C+ G + +A LID++V G + Y ++ + ++ + A +L KM +K D
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA 247
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ S++I LC G + F L+ ++E GF D I++ L+ G C + AKL
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF--KADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 437 RFMLKKRI 444
R M+K++I
Sbjct: 306 RDMIKRKI 313
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
Query: 123 EGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIA 182
+GC +++ ++ N KA L ++ + + RKM + DT+ YN +I+ FCE G +
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 183 ADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLD 242
A EL + M + PDI++Y ++ G C+ G E A +F+ +++ ++ Y+ ++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 243 GICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGC 302
G+C ++ A +L + +G P+V TY +I C KG + EA + +ME G
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKG--VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 303 APNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEA 360
+PN T + LI+ EG+ ++ +LI+++ G S +VV+++ RLK++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG-FSVDASTVKMVVDMLSDGRLKKS 615
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 39/255 (15%)
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
+DA LF+ M R L+ +S L + R + L+L +ME +G + N+ T +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG--IAHNLYTLS 111
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
+I C + A + ++ LG P+ VT STLI G C+EG
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG--------------- 156
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
R+ EA +L +M+ G KP + + ++ LCL G+V +
Sbjct: 157 --------------------RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 396 FCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIV 455
L + + + GF + + +L +C+ + A +L R M +++I L I+
Sbjct: 197 VLLIDRMVETGF--QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 456 EHLKKSGDEELITNL 470
+ L K G + NL
Sbjct: 255 DGLCKDGSLDNAFNL 269
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 197/406 (48%), Gaps = 27/406 (6%)
Query: 40 QKNP-NNIEKTLATVKAKLDSTCVIEVLHRC----FPSQSQMGIRFFIWAALQSSYRHSS 94
+NP +++E TL ++ S V +VL RC FP+ RFF+WA + HS
Sbjct: 48 HRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAH-----RFFLWARRIPDFAHSL 102
Query: 95 FMYNRACEMSRIKQNPSIIID-VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLR 153
Y+ E+ + +++ D ++EA + +S K+ ++F +A L +EA
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFN 162
Query: 154 KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELM---KGMGLIDLYPDIITYVSMIKGFC 210
+M EF ++P + ++ C+K + A E KG G++ P TY +++G+
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIV---PSAKTYSILVRGW- 218
Query: 211 NAGRLEDACG---LFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDC 267
R+ DA G +F M C +L+AY+ALLD +C+ G ++ ++ EM G
Sbjct: 219 --ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG--L 274
Query: 268 SPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQ 327
P+ ++ I +C G + A +LDRM+ PN T + +IK C +D+AY
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 328 LIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
L+D+++ G+ Y+S++ + A KL S+M + PD +++++ L
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394
Query: 388 LGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAA 433
G+ ++E + + F +V + ++V++ GL RK +E A
Sbjct: 395 RIGRFDRATEIWEGMSERKFYPTVAT--YTVMIHGLVRKKGKLEEA 438
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
N A +L +M PD YN V++L G A E+ +GM YP + TY M
Sbjct: 365 NRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVM 424
Query: 206 IKGFC-NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
I G G+LE+AC F++M G L + + G M+ L G+ME+
Sbjct: 425 IHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Query: 265 GDCS 268
CS
Sbjct: 485 S-CS 487
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 167/316 (52%), Gaps = 9/316 (2%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
V + ++ C+ R EA+ ++ M F P+ +IYN VI C+ D+ A E+
Sbjct: 150 VTLGSLLNGFCQGNRF-QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
M + D +TY ++I G N+GR DA L + M + N++ ++AL+D + G
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
++ A L EM + PNV TY S+I FC G + +A + D M + GC P+ VT
Sbjct: 269 NLLEARNLYKEMIRRS--VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
+TLI GFC +++ +L ++ G V Y++L+ + +L A+K+F++M+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 369 ASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRK 426
GV PD + ++++ LC G++ + + ED++K S +D DI +++++ GLCR
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK----SEMDVDIITYNIIIQGLCRT 442
Query: 427 NHSVEAAKLARFMLKK 442
+ EA L R + +K
Sbjct: 443 DKLKEAWCLFRSLTRK 458
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 173/356 (48%), Gaps = 14/356 (3%)
Query: 96 MYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKM 155
+ N C+ +R ++ S++ D ++ + G V +V + + N K R N A+ V M
Sbjct: 155 LLNGFCQGNRFQEAVSLV-DSMDGF---GFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 156 PEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRL 215
+ +R D + YN +I G A L++ M + P++I + ++I F G L
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
+A L+K M R N+ Y++L++G C G + A + M +G C P+VVTY
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG--CFPDVVTYN 328
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
++I FC +++ + + M G + T +TLI G+C G L+ A ++ +++V
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
G Y+ L+ L ++++A + + S + D + +++I+ LC ++ E
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 396 FCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR------FMLKKRIW 445
+CL+ + + G D+ + ++ GLCRK EA KL R FM +RI+
Sbjct: 449 WCLFRSLTRKGV--KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 4/274 (1%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
P + + V+ + + L M + + D+ ++ +I FC RL A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
M + G ++V +LL+G C+ + A+ L+ M +G PNVV Y +VI
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--DGFGFVPNVVIYNTVINGL 194
Query: 282 CGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSG 341
C + AL + ME G + VT +TLI G G +A +L+ +V +
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 342 GCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYED 401
+++L+ V+ L EA L+ +M+ V P+ + +I C+ G + + +++
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 402 IEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ G V + ++ L+ G C+ + KL
Sbjct: 315 MVSKGCFPDVVT--YNTLITGFCKSKRVEDGMKL 346
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 8/233 (3%)
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVT 273
+ +DA LF M + ++V ++ +L I ++ + + L +ME G S ++ +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLG--ISHDLYS 116
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
+T +I FC + AL +L +M LG P+ VT+ +L+ GFC EA L+D +
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
G V + Y++++ L + + L A ++F M G++ D + + +I L G+
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 394 EGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+ L D+ K +D ++ + L+ ++ + +EA L + M+++ +
Sbjct: 237 DAARLLRDMVK----RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 171/322 (53%), Gaps = 8/322 (2%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
+V+ E GC V I N ++ + A+ +LRKM E +++ D Y+ +I C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
G + AA L K M + ++TY S+++G C AG+ D L K M N++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILD 295
++ LLD + G ++ A EL EM G SPN++TY +++ +C + + EA +LD
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 296 RMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
M C+P+ VT ++LIKG+C+ +D+ ++ + G V++ YS LV ++
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 356 RLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI 415
++K AE+LF +M++ GV PD + +++ LC G++ + ++ED++K S +D I
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK----SKMDLGI 473
Query: 416 --HSVLLLGLCRKNHSVEAAKL 435
++ ++ G+C+ +A L
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNL 495
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVS 204
+EA+ ++ +M E +PD + YN+++ C GD A +L++ M ++ D+ TY +
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 205 MIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
+I C G ++ A LFK M+ G +++V Y++L+ G+C+ G LL +M
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR- 292
Query: 265 GDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDE 324
+ PNV+T+ ++ +F +G ++EA + M G +PN +T +TL+ G+C++ L E
Sbjct: 293 -EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 325 AYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIR 384
A ++D +V ++SL+ KR+ + K+F + G+ + + S++++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 385 ELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
C G++ L++++ G L V + + +LL GLC +A ++ + K ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMT--YGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 445 WLQGPYVDKIVEHLKKSGDEELITNL 470
L I+E + K G E NL
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNL 495
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 166/331 (50%), Gaps = 4/331 (1%)
Query: 109 NPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYN 168
+ S+ +D++ +E V I + + + A+ + ++M ++ + YN
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 169 NVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRH 228
+++R C+ G L+K M ++ P++IT+ ++ F G+L++A L+K M
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 229 GCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMK 288
G + N++ Y+ L+DG C + A +L M + CSP++VT+TS+I+ +C +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 289 EALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLV 348
+ + + + G N VT S L++GFC G + A +L ++V+ G + Y L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 349 VELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFL 408
L +L++A ++F + S + + + +I +C GG+V + + L+ + G
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 409 SSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
+V + ++V++ GLC+K EA L R M
Sbjct: 506 PNVMT--YTVMISGLCKKGSLSEANILLRKM 534
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 2/288 (0%)
Query: 126 VVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADE 185
V +V V+ ++ K EA + ++M + P+ I YN ++ +C + + A+
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 186 LMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGIC 245
++ M PDI+T+ S+IKG+C R++D +F+ + + G AN V YS L+ G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 246 RLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPN 305
+ G ++ A EL EM G P+V+TY ++ C G +++AL I + ++
Sbjct: 415 QSGKIKLAEELFQEMVSHG--VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 306 RVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFS 365
V +T+I+G C G +++A+ L + G + Y+ ++ L + L EA L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 366 KMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDS 413
KM G P+ + +IR G + L E+++ GF + S
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 138/258 (53%), Gaps = 4/258 (1%)
Query: 139 CEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPD 198
C + RL+ EA +L M PD + + ++I+ +C + ++ + + L +
Sbjct: 344 CMQNRLS-EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 199 IITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLG 258
+TY +++GFC +G+++ A LF+ M HG +++ Y LLDG+C G +E+ALE+
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 259 EMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCV 318
+++K D +V YT++I+ C G +++A + + G PN +T + +I G C
Sbjct: 463 DLQKSKMDLG--IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 319 EGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA 378
+G+L EA L+ K+ G+ + Y++L+ +R L + KL +M + G D +
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 379 CSVMIRELCLGGQVLEGF 396
++I ++ L G++ + F
Sbjct: 581 IKMVI-DMLLSGELDKSF 597
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVS 204
++ M V R + + L + + Y+ +++ FC+ G + A+EL + M + PD++TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 205 MIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
++ G C+ G+LE A +F+ +++ +V Y+ +++G+C+ G +E A L + +G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 265 GDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDE 324
PNV+TYT +I C KG + EA +L +ME G APN T +TLI+ +G+L
Sbjct: 504 --VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 325 AYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLA 369
+ +LI+++ + G S+ +V++++ + E +K F ML+
Sbjct: 562 SAKLIEEMKSCG-FSADASSIKMVIDMLLS---GELDKSFLDMLS 602
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 4/229 (1%)
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
+DA LF+ M R +LV +S I R L+ ++E G + N+ T
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG--IAHNIYTLN 127
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
+I FC A +L ++ LG P+ T +TLIKG +EG + EA L+D++V
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
G Y+S+V + R+ A L KM VK D S +I LC G +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 396 FCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
L++++E G SSV + ++ L+ GLC+ + A L + M+ + I
Sbjct: 248 ISLFKEMETKGIKSSVVT--YNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P ++ + + K ++ +G A N+ + +++ CR A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
LG++ K G + P+ T+ ++I+ +G + EA+ ++DRM GC P+ VT ++++ G
Sbjct: 146 LGKVMKLGYE--PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C G+ A L+ K+ + YS+++ L R + A LF +M G+K
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ + ++R LC G+ +G L +D+ + +V + +VLL ++ EA +L
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT--FNVLLDVFVKEGKLQEANELY 321
Query: 437 RFMLKKRI 444
+ M+ + I
Sbjct: 322 KEMITRGI 329
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 101 CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLR-KMPEFD 159
C+ ++++ I D+ ++ + G V+ +I +C+ ++ E W L +P
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTT---IIEGMCKGGKV--EDAWNLFCSLPCKG 503
Query: 160 LRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDAC 219
++P+ + Y +I C+KG + A+ L++ M P+ TY ++I+ G L +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 220 GLFKVMKRHGCAANLVAYSALLD 242
L + MK G +A+ + ++D
Sbjct: 564 KLIEEMKSCGFSADASSIKMVID 586
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 174/337 (51%), Gaps = 20/337 (5%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F +NRA E + +V+ +GC + ++ N LC++ + + A+
Sbjct: 194 HGLFRHNRASEA----------VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI-DLALS 242
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L+KM + + P +IYN +I C ++ A L M + P+++TY S+I+ C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
N GR DA L M N+V +SAL+D + G + A +L EM K D P+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PD 360
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY+S+I FC + EA + + M + C PN VT +TLIKGFC +DE +L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G V + Y++L+ + + A+ +F +M++ GV PD + S+++ LC G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHS--VLLLGLCR 425
+V ++E +++ S ++ DI++ +++ G+C+
Sbjct: 481 KVETALVVFEYLQR----SKMEPDIYTYNIMIEGMCK 513
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 164/334 (49%), Gaps = 8/334 (2%)
Query: 111 SIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNN 169
++I + E + G ++ ++ N C +++L+ A+ VL KM + PD + N+
Sbjct: 98 DLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS-LALAVLAKMMKLGYEPDIVTLNS 156
Query: 170 VIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHG 229
++ FC + A L+ M + PD T+ ++I G R +A L M G
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 230 CAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKE 289
C +LV Y +++G+C+ G ++ AL LL +ME+ G P VV Y ++I C + +
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ--GKIEPGVVIYNTIIDALCNYKNVND 274
Query: 290 ALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVV 349
AL + M+ G PN VT ++LI+ C G +A +L+ ++ + +S+L+
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 350 ELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYE-DIEKIGFL 408
V+ +L EAEKL+ +M+ + PD S +I C+ ++ E ++E I K F
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 409 SSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
+ V ++ L+ G C+ E +L R M ++
Sbjct: 395 NVV---TYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 180 MIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSA 239
+I+ E M+ +G+ ++ TY +I FC +L A + M + G ++V ++
Sbjct: 100 VISLGEQMQNLGI---SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
Query: 240 LLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEA 299
LL+G C + A+ L+G+M + G P+ T+ ++I EA+ ++DRM
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMG--YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 300 LGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKE 359
GC P+ VT ++ G C G++D A L+ K+ G Y++++ L K + +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 360 AEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVL 419
A LF++M G++P+ + + +IR LC G+ + L D+ + +V + S L
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT--FSAL 332
Query: 420 LLGLCRKNHSVEAAKLARFMLKKRI 444
+ ++ VEA KL M+K+ I
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
N +L+DA LF M + ++V +S LL I ++ + + L +M+ G S N
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG--ISHN 115
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY+ +I FC + + AL +L +M LG P+ VT+++L+ GFC + +A L+
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++V G +++L+ L R R EA L +M+ G +PD + +++ LC G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+ L + +E+ V I++ ++ LC + +A L M K I
Sbjct: 236 DIDLALSLLKKMEQGKIEPGV--VIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 141 KARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDII 200
+AR + A V ++M + PD + Y+ ++ C G + A + + + + PDI
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 201 TYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM 260
TY MI+G C AG++ED LF + G N+V Y+ ++ G CR G E A L EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 261 EKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEG 320
++EG P+ TY ++I+ G + ++ M + + TI L+ +G
Sbjct: 563 KEEGP--LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDG 619
Query: 321 NLDEAY 326
LD+++
Sbjct: 620 RLDKSF 625
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 5/275 (1%)
Query: 161 RPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACG 220
RP YN +I C++GD+ AA L + M L PD +TY SMI GF GRL+D
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 221 LFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQI 280
F+ MK C +++ Y+AL++ C+ G + LE EM+ G PNVV+Y++++
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK--GNGLKPNVVSYSTLVDA 376
Query: 281 FCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSS 340
FC +GMM++A+ M +G PN T ++LI C GNL +A++L ++++ G +
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 341 GGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYE 400
Y++L+ L +R+KEAE+LF KM +GV P+ + + +I + L
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 401 DIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+++ G D ++ + GLC +EAAK+
Sbjct: 497 ELKGRGI--KPDLLLYGTFIWGLCSL-EKIEAAKV 528
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 170/369 (46%), Gaps = 5/369 (1%)
Query: 65 VLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEG 124
+LHR ++ F + + R + F YN + + + + E K G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 125 CVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD 184
V + + K ++ + +M + PD I YN +I FC+ G +
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 185 ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244
E + M L P++++Y +++ FC G ++ A + M+R G N Y++L+D
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAP 304
C++G++ A L EM + G + NVVTYT++I C MKEA + +M+ G P
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364
N + + LI GF N+D A +L++++ G Y + + L ++++ A+ +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 365 SKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLC 424
++M G+K + L + ++ G EG L ++++++ +V + VL+ GLC
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT--FCVLIDGLC 588
Query: 425 RKNHSVEAA 433
KN V A
Sbjct: 589 -KNKLVSKA 596
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 3/290 (1%)
Query: 153 RKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNA 212
R+M L+P+ + Y+ ++ FC++G M A + M + L P+ TY S+I C
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
Query: 213 GRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVV 272
G L DA L M + G N+V Y+AL+DG+C M+ A EL G+M+ G PN+
Sbjct: 416 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG--VIPNLA 473
Query: 273 TYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKV 332
+Y ++I F M AL +L+ ++ G P+ + T I G C ++ A +++++
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 333 VAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQV 392
G ++ Y++L+ ++ E L +M ++ + V+I LC V
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 393 LEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
+ + I F ++ I + ++ GLC+ N A L M++K
Sbjct: 594 SKAVDYFNRISN-DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 167/381 (43%), Gaps = 26/381 (6%)
Query: 32 AERFYTHLQKN---PNNIEKTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQS 88
A +FY +++ PN T + +D+ C I L F ++M + ++
Sbjct: 386 AIKFYVDMRRVGLVPNEY-----TYTSLIDANCKIGNLSDAFRLGNEM-----LQVGVEW 435
Query: 89 SYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEA 148
+ + + + C+ R+K+ + + A G + ++ + + KA+ + A
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTA----GVIPNLASYNALIHGFVKAKNMDRA 491
Query: 149 MWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKG 208
+ +L ++ ++PD ++Y I C + AA +M M + + + Y +++
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 209 FCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCS 268
+ +G + L MK +V + L+DG+C+ + +A++ + + G
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG-LQ 610
Query: 269 PNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQL 328
N +T++I C ++ A + ++M G P+R ++L+ G +GN+ EA L
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 329 IDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLAC-SVMIRELC 387
DK+ G Y+SLV L +L++A +M+ G+ PD + C SV+ +
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 730
Query: 388 LGGQVLEGFCLYEDIEKIGFL 408
LG C+ E +E +L
Sbjct: 731 LG-------CIDEAVELQSYL 744
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 174/337 (51%), Gaps = 20/337 (5%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F++N+A E + +V+ + GC + + N LC++ + + A+
Sbjct: 196 HGLFLHNKASEA----------VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI-DLALS 244
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L+KM + + D +IYN +I C+ M A L M + PD+ TY S+I C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
N GR DA L M N+V +SAL+D + G + A +L EM K D P+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PD 362
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY+S+I FC + EA + + M + C PN VT STLIKGFC ++E +L
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G V + Y++L+ + + A+ +F +M++ GV P+ L ++++ LC G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHS--VLLLGLCR 425
++ + ++E +++ S+++ DI++ +++ G+C+
Sbjct: 483 KLAKAMVVFEYLQR----STMEPDIYTYNIMIEGMCK 515
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 8/333 (2%)
Query: 112 IIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNV 170
++I + E + G + + N C +++L+ A+ VL KM + PD + +++
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS-LALAVLAKMMKLGYEPDIVTLSSL 159
Query: 171 IRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGC 230
+ +C + A L+ M + PD T+ ++I G + +A L M + GC
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 231 AANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEA 290
+LV Y +++G+C+ G ++ AL LL +MEK G +VV Y ++I C M +A
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 291 LGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVE 350
L + M+ G P+ T S+LI C G +A +L+ ++ + +S+L+
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 351 LVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYE-DIEKIGFLS 409
V+ +L EAEKL+ +M+ + PD S +I C+ ++ E ++E I K F +
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 410 SVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
V +S L+ G C+ E +L R M ++
Sbjct: 398 VV---TYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 5/302 (1%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
LC R + +A +L M E + P+ + ++ +I F ++G ++ A++L M + P
Sbjct: 303 LCNYGRWS-DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
DI TY S+I GFC RL++A +F++M C N+V YS L+ G C+ +E +EL
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
EM + G N VTYT++I F A + +M ++G PN +T + L+ G C
Sbjct: 422 REMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G L +A + + + Y+ ++ + + ++++ +LF + GV P+ +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 378 ACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR 437
A + MI C G E L + +++ G L +S ++ L+ R +A+L +
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLP--NSGTYNTLIRARLRDGDREASAELIK 597
Query: 438 FM 439
M
Sbjct: 598 EM 599
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 162/335 (48%), Gaps = 35/335 (10%)
Query: 70 FPSQSQMGIR--FFIWAALQSSYRHSSFMYNRACEMSRI-------KQNPSIII--DVVE 118
F GIR F +++L S + Y R + SR+ K NP+++ +++
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCN----YGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 119 AYKEEGCVVSVK-----MMK------------VIFNLCEKARLANEAMWVLRKMPEFDLR 161
A+ +EG +V + M+K +I C RL +EA + M D
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKDCF 395
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
P+ + Y+ +I+ FC+ + EL + M L + +TY ++I GF A ++A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
FK M G N++ Y+ LLDG+C+ G + +A+ + +++ + P++ TY +I+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME--PDIYTYNIMIEGM 513
Query: 282 CGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSG 341
C G +++ + + G +PN + +T+I GFC +G+ +EA L+ K+ G + +
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 342 GCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
G Y++L+ +R + + +L +M + G D
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 180 MIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSA 239
+I+ E M+ +G+ D+ TY I FC +L A + M + G ++V S+
Sbjct: 102 VISLGEQMQTLGI---SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 240 LLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEA 299
LL+G C + A+ L+ +M + G P+ T+T++I EA+ ++D+M
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMG--YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 300 LGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKE 359
GC P+ VT T++ G C G++D A L+ K+ G + Y++++ L + K + +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 360 AEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVL 419
A LF++M G++PD S +I LC G+ + L D+ + +V + S L
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT--FSAL 334
Query: 420 LLGLCRKNHSVEAAKLARFMLKKRI 444
+ ++ VEA KL M+K+ I
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVT 273
+++DA LF M + ++V ++ LL + ++ E + L +M+ G S ++ T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG--ISHDLYT 120
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
Y+ I FC + + AL +L +M LG P+ VT+S+L+ G+C + +A L+D++V
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
G +++L+ L + EA L +M+ G +PD + ++ LC G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 394 EGFCLYEDIEKIGFLSSVDSD--IHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
L + +EK +++D I++ ++ GLC+ H +A L M K I
Sbjct: 241 LALSLLKKMEK----GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 141 KARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDII 200
+AR + A V ++M + P+ + YN ++ C+ G + A + + + + PDI
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 201 TYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM 260
TY MI+G C AG++ED LF + G + N++AY+ ++ G CR GS E A LL +M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 261 EKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEG 320
+++G PN TY ++I+ G + + ++ M + G A + TI L+ +G
Sbjct: 565 KEDGP--LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDG 621
Query: 321 NLDEAY 326
LD+++
Sbjct: 622 RLDKSF 627
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 17/282 (6%)
Query: 163 DTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLF 222
D I ++ + LF GDM+ + +P I+ + ++ + E L
Sbjct: 60 DIIKVDDAVDLF---GDMVKSRP----------FPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 223 KVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFC 282
+ M+ G + +L YS ++ CR + AL +L +M K G + P++VT +S++ +C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE--PDIVTLSSLLNGYC 164
Query: 283 GKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGG 342
+ +A+ ++D+M +G P+ T +TLI G + EA L+D++V G
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 343 CYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDI 402
Y ++V L + + A L KM ++ D + + +I LC + + L+ ++
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 403 EKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+ G V + +S L+ LC +A++L M++++I
Sbjct: 285 DNKGIRPDVFT--YSSLISCLCNYGRWSDASRLLSDMIERKI 324
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
+++ E GC + + N+ K+ AM +LRKM E +++ D + Y+ +I C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
+ G + A L M + + +IITY +I GFCNAGR +D L + M + N+V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILD 295
+S L+D + G + A EL EM G +P+ +TYTS+I FC + + +A ++D
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRG--IAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 296 RMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
M + GC PN T + LI G+C +D+ +L K+ G V+ Y++L+
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 356 RLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI 415
+L A++LF +M++ V P+ + +++ LC G+ + ++E IEK +D I
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM--ELDIGI 510
Query: 416 HSVLLLGLCRKNHSVEAAKL 435
+++++ G+C + +A L
Sbjct: 511 YNIIIHGMCNASKVDDAWDL 530
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 182/355 (51%), Gaps = 10/355 (2%)
Query: 94 SFMYNRACEMSRIKQNPSIIIDVVE-AYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVL 152
S + N C R+ + ++ +VE +K + ++ ++ LC + A EAM ++
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT----LVNGLCLSGKEA-EAMLLI 216
Query: 153 RKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNA 212
KM E+ +P+ + Y V+ + C+ G A EL++ M ++ D + Y +I G C
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 213 GRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVV 272
G L++A LF M+ G N++ Y+ L+ G C G + +LL +M K +PNVV
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR--KINPNVV 334
Query: 273 TYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKV 332
T++ +I F +G ++EA + M G AP+ +T ++LI GFC E +LD+A Q++D +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 333 VAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQV 392
V+ G + ++ L+ + R+ + +LF KM GV D + + +I+ C G++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 393 LEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQ 447
L++++ ++ + + +LL GLC S +A ++ + K ++ L
Sbjct: 455 NVAKELFQEMVSRKVPPNIVT--YKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA + ++M + PDTI Y ++I FC++ + A++++ M P+I T+ +I
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
G+C A R++D LF+ M G A+ V Y+ L+ G C LG + A EL EM
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR--K 468
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
PN+VTY ++ C G ++AL I +++E + + +I G C +D+A+
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
L + G Y+ ++ L + L EAE LF KM G PDG +++IR
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDS 413
G + L E++++ GF SVD+
Sbjct: 589 LGDGDATKSVKLIEELKRCGF--SVDA 613
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 23/320 (7%)
Query: 128 SVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELM 187
++ +M F C K LA AM K+ + P+TI ++ +I C +G + A EL+
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMG---KIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 188 KGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRL 247
M + PD+IT +++ G C +G+ +A L M +GC N V Y +L+ +C+
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
G A+ELL +ME+ + + V Y+ +I C G + A + + ME G N +
Sbjct: 242 GQTALAMELLRKMEER--NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKM 367
T + LI GFC G D+ +L+ ++ + +S L+ V+ +L+EAE+L +M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSV------DSDIHS--VL 419
+ G+ PD + + +I +GFC ++K + + D +I + +L
Sbjct: 360 IHRGIAPDTITYTSLI----------DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 420 LLGLCRKNHSVEAAKLARFM 439
+ G C+ N + +L R M
Sbjct: 410 INGYCKANRIDDGLELFRKM 429
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 3/273 (1%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I C R + A +LR M + + P+ + ++ +I F ++G + A+EL K M
Sbjct: 304 LIGGFCNAGRWDDGAK-LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
+ PD ITY S+I GFC L+ A + +M GC N+ ++ L++G C+ ++
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
LEL +M G + VTY ++IQ FC G + A + M + PN VT L+
Sbjct: 423 LELFRKMSLRG--VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G C G ++A ++ +K+ G Y+ ++ + ++ +A LF + GVK
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
P ++MI LC G + E L+ +E+ G
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 129/248 (52%), Gaps = 4/248 (1%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P +I + + + + L K M+ G A NL S +++ CR + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
+G++ K G + PN +T++++I C +G + EAL ++DRM +G P+ +TI+TL+ G
Sbjct: 146 MGKIIKLGYE--PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C+ G EA LIDK+V G + Y ++ + ++ + A +L KM +K D
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ S++I LC G + F L+ ++E G +++ + +++L+ G C + AKL
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT--YNILIGGFCNAGRWDDGAKLL 321
Query: 437 RFMLKKRI 444
R M+K++I
Sbjct: 322 RDMIKRKI 329
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
+V+ +GC +++ ++ N KA ++ + + RKM + DT+ YN +I+ FC
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
E G + A EL + M + P+I+TY ++ G C+ G E A +F+ +++ ++
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILD 295
Y+ ++ G+C ++ A +L + +G P V TY +I C KG + EA +
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKG--VKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 296 RMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
+ME G AP+ T + LI+ +G+ ++ +LI+++ G S +V++++
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG-FSVDASTIKMVIDMLSDG 626
Query: 356 RLKEA 360
RLK++
Sbjct: 627 RLKKS 631
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 145/336 (43%), Gaps = 45/336 (13%)
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLF-----CEKGDMIAADELMKGMGLIDLYPDI 199
A++A+ + R M P I ++ RLF ++ D++ A L K M L + ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFS---RLFSAIAKTKQYDLVLA--LCKQMELKGIAHNL 123
Query: 200 ITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGE 259
T MI FC +L A + + G N + +S L++G+C G + ALEL+
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 260 MEKEGGD---------------------------------CSPNVVTYTSVIQIFCGKGM 286
M + G C PN VTY V+ + C G
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 287 MKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSS 346
A+ +L +ME + V S +I G C G+LD A+ L +++ G ++ Y+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 347 LVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
L+ R + KL M+ + P+ + SV+I G++ E L++++ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 407 FLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
+ D+ ++ L+ G C++NH +A ++ M+ K
Sbjct: 364 I--APDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 163/339 (48%), Gaps = 35/339 (10%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
LC++ R+ +EA+ +L +M P +IYN +I C+KGD+ +L+ M L P
Sbjct: 232 LCKEERI-DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
+ +TY ++I G C G+L+ A L + M C N V Y L++G+ + A+ LL
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 258 GEMEKEG---------------------------------GDCSPNVVTYTSVIQIFCGK 284
ME+ G C PN+V Y+ ++ C +
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 285 GMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCY 344
G EA IL+RM A GC PN T S+L+KGF G +EA Q+ ++ G + CY
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 345 SSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIE- 403
S L+ L R+KEA ++SKML G+KPD +A S +I+ LC G + LY ++
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 404 KIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
+ S D +++LL GLC + A L ML +
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 7/291 (2%)
Query: 110 PSIIIDVVEAYKEE-GCVVSVKMMKVIFNLCEKARLANEAM----WVLRKMPEFDLRPDT 164
P +D+ +E C SVK + N+ L + + +V+ ++ P+
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 165 IIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKV 224
+ +N VI+ C+ + A E+ +GM PD TY +++ G C R+++A L
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 225 MKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGK 284
M+ GC+ + V Y+ L+DG+C+ G + R +L+ M +G C PN VTY ++I C K
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG--CVPNEVTYNTLIHGLCLK 305
Query: 285 GMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCY 344
G + +A+ +L+RM + C PN VT TLI G + +A +L+ + G + Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 345 SSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
S L+ L + + +EA L+ KM G KP+ + SV++ LC G+ E
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 52/311 (16%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRL 173
+ ++ + +E G ++ + V+ + K A EAM + RKM E +P+ ++Y+ ++
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 174 FCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAAN 233
C +G A E++ M P+ TY S++KGF G E+A ++K M + GC+ N
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 234 -----------------------------------LVAYSALLDGICRLGSMERALELLG 258
VAYS+++ G+C +GSM+ AL+L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 259 EME-KEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
EM +E P+VVTY ++ C + + A+ +L+ M GC P+ +T +T +
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 318 VEGN-LDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
+ N D+ +++ LVV L++ +R+ A + ML + P
Sbjct: 587 EKSNSCDKGRSFLEE---------------LVVRLLKRQRVSGACTIVEVMLGKYLAPKT 631
Query: 377 LACSVMIRELC 387
++++RE+C
Sbjct: 632 STWAMIVREIC 642
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 114/212 (53%), Gaps = 4/212 (1%)
Query: 231 AANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEA 290
+ N ++++ ++ +C+L ++RA+E+ M + C P+ TY +++ C + + EA
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER--KCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 291 LGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVE 350
+ +LD M++ GC+P+ V + LI G C +G+L +L+D + G V + Y++L+
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 351 LVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSS 410
L +L +A L +M++S P+ + +I L + + L +E+ G+
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY--H 359
Query: 411 VDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
++ I+SVL+ GL ++ + EA L R M +K
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 154/338 (45%), Gaps = 10/338 (2%)
Query: 132 MKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMG 191
M+V+ N E A ++ + KM F L T+ +++I + GD + ++L+ +
Sbjct: 48 MEVVENPLE-APISEKMFKSAPKMGSFKLGDSTL--SSMIESYANSGDFDSVEKLLSRIR 104
Query: 192 LIDLYPDIITYVSMIKGFCNAGRLEDACGLF-KVMKRHGCAANLVAYSALLDGICRLGSM 250
L + +++ + + + A + A LF +++ C ++ +++++L+ I G
Sbjct: 105 LENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLY 164
Query: 251 ERALELLGEM--EKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
R LE + + SPN +++ VI+ C + A+ + M C P+ T
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
TL+ G C E +DEA L+D++ + G S Y+ L+ L + L KL M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 369 ASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI-HSVLLLGLCRKN 427
G P+ + + +I LCL G++ + L +E++ + +D+ + L+ GL ++
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSL---LERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 428 HSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEE 465
+ +A +L M ++ L ++ L K G E
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 174/337 (51%), Gaps = 20/337 (5%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F++N+A E + +++ GC + + N LC++ + + A+
Sbjct: 193 HGLFLHNKASEA----------VALIDRMVARGCQPDLFTYGTVVNGLCKRGDI-DLALS 241
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L+KM + + D +IY +I C ++ A L M + P+++TY S+I+ C
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
N GR DA L M N+V +SAL+D + G + A +L EM K D P+
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PD 359
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY+S+I FC + EA + + M + C PN VT +TLIKGFC ++E +L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G V + Y++L+ L + A+K+F KM++ GV PD + S+++ LC G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHS--VLLLGLCR 425
++ + ++E ++K S ++ DI++ +++ G+C+
Sbjct: 480 KLEKALVVFEYLQK----SKMEPDIYTYNIMIEGMCK 512
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 152/294 (51%), Gaps = 4/294 (1%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
N+A+ + +M +RP+ + YN++IR C G A L+ M + P+++T+ ++
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I F G+L +A L+ M + ++ YS+L++G C ++ A + M +
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-- 389
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
DC PNVVTY ++I+ FC ++E + + M G N VT +TLI+G G+ D A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 326 YQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRE 385
++ K+V+ G YS L+ L + +L++A +F + S ++PD ++MI
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 386 LCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
+C G+V +G+ L+ + G +V I++ ++ G CRK EA L R M
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNV--IIYTTMISGFCRKGLKEEADALFREM 561
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 164/327 (50%), Gaps = 7/327 (2%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
C +++L A+ VL KM + PD + ++++ +C + A L+ M +++ P
Sbjct: 125 FCRRSQLP-LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
+ +T+ ++I G + +A L M GC +L Y +++G+C+ G ++ AL LL
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
+MEK G +VV YT++I C + +AL + M+ G PN VT ++LI+ C
Sbjct: 244 KKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G +A +L+ ++ + +S+L+ V+ +L EAEKL+ +M+ + PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 378 ACSVMIRELCLGGQVLEGFCLYE-DIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
S +I C+ ++ E ++E I K F + V ++ L+ G C+ E +L
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV---TYNTLIKGFCKAKRVEEGMELF 418
Query: 437 RFMLKKRIWLQGPYVDKIVEHLKKSGD 463
R M ++ + + +++ L ++GD
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGD 445
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 155/326 (47%), Gaps = 30/326 (9%)
Query: 97 YNRACEMSRI-------KQNPSIII--DVVEAYKEEGCVVSVKMMKVIFNLCEKARLANE 147
Y R + SR+ K NP+++ +++A+ +EG L E +L +E
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG------------KLVEAEKLYDE 350
Query: 148 AMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIK 207
M + + PD Y+++I FC + A + + M D +P+++TY ++IK
Sbjct: 351 -------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 208 GFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDC 267
GFC A R+E+ LF+ M + G N V Y+ L+ G+ + G + A ++ +M +G
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG--V 461
Query: 268 SPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQ 327
P+++TY+ ++ C G +++AL + + ++ P+ T + +I+G C G +++ +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 328 LIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
L + G + Y++++ R +EA+ LF +M G P+ + +IR
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 388 LGGQVLEGFCLYEDIEKIGFLSSVDS 413
G L +++ GF+ +
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDAST 607
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
D+ +Y +I FC +L A + M + G ++V S+LL+G C + A+ L+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
+M + PN VT+ ++I EA+ ++DRM A GC P+ T T++ G C
Sbjct: 174 DQMFVM--EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G++D A L+ K+ G + Y++++ L K + +A LF++M G++P+ +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 378 ACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR 437
+ +IR LC G+ + L D+ + +V + S L+ ++ VEA KL
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT--FSALIDAFVKEGKLVEAEKLYD 349
Query: 438 FMLKKRI 444
M+K+ I
Sbjct: 350 EMIKRSI 356
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 131/239 (54%), Gaps = 2/239 (0%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
++AM VL KM E + PD + YN++I C G+ +A L+ M L PD TY SM
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I C + R+E+AC LF +++ G N+V Y+AL+DG C+ G ++ A +L +M +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK-- 561
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
+C PN +T+ ++I C G +KEA + ++M +G P T + LI +G+ D A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 326 YQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIR 384
Y ++++ G+ Y++ + R RL +AE + +KM +GV PD S +I+
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 145/280 (51%), Gaps = 15/280 (5%)
Query: 122 EEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMI 181
E+G + +V + N K + +A+ V+ M L P+T YN +I+ +C+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN--- 442
Query: 182 AADELMKGMGLID------LYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
+ K MG+++ + PD++TY S+I G C +G + A L +M G +
Sbjct: 443 ----VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILD 295
Y++++D +C+ +E A +L +E++G +PNVV YT++I +C G + EA +L+
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKG--VNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 296 RMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
+M + C PN +T + LI G C +G L EA L +K+V G + + L+ L++
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 356 RLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
A F +ML+SG KPD + I+ C G++L+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 166/323 (51%), Gaps = 7/323 (2%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
+++V+ +E G ++ V+ + LC + + +A +L +M E L P+ I YN +I
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF-EKARELLGQMLEKGLMPNVITYNALIN 401
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
+C++G + A ++++ M L P+ TY +IKG+C + + A G+ M
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLP 460
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
++V Y++L+DG CR G+ + A LL M G P+ TYTS+I C ++EA
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG--LVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+ D +E G PN V + LI G+C G +DEA+ +++K+++ + + +++L+ L
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD 412
+LKEA L KM+ G++P +++I L G + ++ + G + D
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG--TKPD 636
Query: 413 SDIHSVLLLGLCRKNHSVEAAKL 435
+ ++ + CR+ ++A +
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDM 659
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 157/310 (50%), Gaps = 8/310 (2%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIF-NLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
+D+ K++ C +V+ V+ +LC R +EA+ ++++M E ++P+ Y +I
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSER-KSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
C + A EL+ M L P++ITY ++I G+C G +EDA + ++M+ +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
N Y+ L+ G C+ ++ +A+ +L +M + P+VVTY S+I C G A
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLER--KVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+L M G P++ T +++I C ++EA L D + G + Y++L+
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD 412
+ ++ EA + KML+ P+ L + +I LC G++ E L E + KIG +V
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 413 SD---IHSVL 419
+D IH +L
Sbjct: 604 TDTILIHRLL 613
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 38/336 (11%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+ N + L +E V +M E + P+ YN ++ +C+ G++ A++ + +
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
L PD TY S+I G+C L+ A +F M GC N VAY+ L+ G+C ++ A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
++L +M+ + +C P V TYT +I+ CG EAL ++ ME G PN T + LI
Sbjct: 308 MDLFVKMKDD--ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSL---------------VVELVRTKRLK 358
C + ++A +L+ +++ G + + Y++L VVEL+ +++L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 359 EAEKLF-------------------SKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLY 399
+ + +KML V PD + + +I C G + L
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 400 EDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ G + D ++ ++ LC+ EA L
Sbjct: 486 SLMNDRGLVP--DQWTYTSMIDSLCKSKRVEEACDL 519
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 180/451 (39%), Gaps = 86/451 (19%)
Query: 30 SPAERFYTHLQKN--PNNIEKTLATVKAKLDSTCVIEVL--HRCFPSQSQMGIRFFIWAA 85
SP R Y L K +N+ K + + L+ + +V+ + Q + G
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG-------N 477
Query: 86 LQSSYRHSSFMYNRA---------------CEMSRIKQNPSIIIDVVEAYKEEGCVVSVK 130
S+YR S M +R C+ R+++ D+ ++ +++G +V
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE----ACDLFDSLEQKGVNPNVV 533
Query: 131 MMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKG------------ 178
M + + KA +EA +L KM + P+++ +N +I C G
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 179 -----------DMIAADELMKGMGLIDLY------------PDIITYVSMIKGFCNAGRL 215
D I L+K Y PD TY + I+ +C GRL
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
DA + M+ +G + +L YS+L+ G LG A ++L M G C P+ T+
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG--CEPSQHTFL 711
Query: 276 SVIQI---------------FCGKGMMKE---ALGILDRMEALGCAPNRVTISTLIKGFC 317
S+I+ C M E + +L++M PN + LI G C
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 318 VEGNLDEAYQLIDKVVAGGSVS-SGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
GNL A ++ D + +S S +++L+ + K+ EA K+ M+ G P
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGF 407
+C V+I L G+ G +++++ + G+
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 118/243 (48%), Gaps = 4/243 (1%)
Query: 202 YVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEME 261
Y +++ G +++ ++ M N+ Y+ +++G C+LG++E A + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 262 KEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGN 321
+ G D P+ TYTS+I +C + + A + + M GC N V + LI G CV
Sbjct: 246 EAGLD--PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 322 LDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSV 381
+DEA L K+ + Y+ L+ L ++R EA L +M +G+KP+ +V
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 382 MIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLK 441
+I LC + + L + + G + +V + ++ L+ G C++ +A + M
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVIT--YNALINGYCKRGMIEDAVDVVELMES 421
Query: 442 KRI 444
+++
Sbjct: 422 RKL 424
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
Y +++ G++ E + M PN T + ++ G+C GN++EA Q + K+V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
G Y+SL++ + K L A K+F++M G + + +A + +I LC+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 394 EGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM----LKKRIWLQGP 449
E L+ ++ +V + ++VL+ LC EA L + M +K I
Sbjct: 306 EAMDLFVKMKDDECFPTVRT--YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 450 YVDKIVEHLKKSGDEELITNLPKIG 474
+D + K EL+ + + G
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKG 388
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 8/213 (3%)
Query: 69 CFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVS 128
C PSQ I L+ Y C MS + + +++ +++E E +
Sbjct: 703 CEPSQHT--FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV-ELLEKMVEHSVTPN 759
Query: 129 VKMM-KVIFNLCEKARLANEAMWVLRKMPEFD-LRPDTIIYNNVIRLFCEKGDMIAADEL 186
K K+I +CE L A V M + + P +++N ++ C+ A ++
Sbjct: 760 AKSYEKLILGICEVGNL-RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 187 MKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICR 246
+ M + P + + +I G G E +F+ + + G + +A+ ++DG+ +
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 247 LGSMERALELLGEMEKEGGDCSPNVVTYTSVIQ 279
G +E EL MEK G C + TY+ +I+
Sbjct: 879 QGLVEAFYELFNVMEKNG--CKFSSQTYSLLIE 909
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 55/188 (29%)
Query: 174 FCEKGDMIAAD---ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRH-G 229
C +M+ D EL++ M + P+ +Y +I G C G L A +F M+R+ G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 230 CAANLVAYSALLDGICRLGSMERALELLGEM-----------------------EKEGGD 266
+ + + ++ALL C+L A +++ +M EKE G
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG- 850
Query: 267 CSPNVVTYTSVIQ--IFCG-----------------KGMMKEALGILDRMEALGCAPNRV 307
TSV Q + CG +G+++ + + ME GC +
Sbjct: 851 --------TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQ 902
Query: 308 TISTLIKG 315
T S LI+G
Sbjct: 903 TYSLLIEG 910
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 121 KEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDM 180
+ EG S + + + C K + NEA V+ M P +I +KG+
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 181 IAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSAL 240
+ + + Y D + + +I G G +E LF VM+++GC + YS L
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 241 LDG 243
++G
Sbjct: 908 IEG 910
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 178/397 (44%), Gaps = 77/397 (19%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
++E + G V V V+ + KA N A+ VL +M + PD + YN ++R C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLC 215
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
+ G + A E++ M D YPD+ITY +I+ C + A L M+ GC ++V
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPN------------------------- 270
Y+ L++GIC+ G ++ A++ L +M G C PN
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSG--CQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 271 ----------VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEG 320
VVT+ +I C KG++ A+ IL++M GC PN ++ + L+ GFC E
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 321 NLDEAYQLIDKVVAGG-----------------------------SVSSGGC------YS 345
+D A + ++++V+ G +SS GC Y+
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 346 SLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKI 405
+++ L + + +A KL +M A +KPD + S ++ L G+V E + + E++
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 406 GFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
G + + + ++LGLC+ + A FM+ +
Sbjct: 514 GIRPNAVT--FNSIMLGLCKSRQTDRAIDFLVFMINR 548
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 150/280 (53%), Gaps = 4/280 (1%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
+ +++ ++ GC V V+ N +C++ RL +EA+ L MP +P+ I +N ++R
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL-DEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
C G + A++L+ M P ++T+ +I C G L A + + M +HGC
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
N ++Y+ LL G C+ M+RA+E L M G C P++VTY +++ C G +++A+
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG--CYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
IL+++ + GC+P +T +T+I G G +A +L+D++ A YSSLV L
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQV 392
R ++ EA K F + G++P+ + + ++ LC Q
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 13/307 (4%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAAD---ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDA 218
PD I +IR FC G A E+++G G + PD+ITY MI G+C AG + +A
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV---PDVITYNVMISGYCKAGEINNA 191
Query: 219 CGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVI 278
V+ R + ++V Y+ +L +C G +++A+E+L M + DC P+V+TYT +I
Sbjct: 192 ---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR--DCYPDVITYTILI 246
Query: 279 QIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSV 338
+ C + A+ +LD M GC P+ VT + L+ G C EG LDEA + ++ + + G
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 339 SSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCL 398
+ ++ ++ + T R +AEKL + ML G P + +++I LC G + +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 399 YEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHL 458
E + + G +S ++ LL G C++ A + M+ + + + ++ L
Sbjct: 367 LEKMPQHG--CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 459 KKSGDEE 465
K G E
Sbjct: 425 CKDGKVE 431
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
Query: 168 NNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKR 227
NN +R G++ + ++ M PDII ++I+GFC G+ A + ++++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 228 HGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMM 287
G +++ Y+ ++ G C+ G + AL +L M SP+VVTY ++++ C G +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKL 220
Query: 288 KEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSL 347
K+A+ +LDRM C P+ +T + LI+ C + + A +L+D++ G Y+ L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 348 VVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGF 407
V + + RL EA K + M +SG +P+ + ++++R +C G+ ++ L D+ + GF
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 408 LSSVDSDIHSVLLLGLCRK 426
SV + ++L+ LCRK
Sbjct: 341 SPSVVT--FNILINFLCRK 357
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 131/251 (52%), Gaps = 4/251 (1%)
Query: 123 EGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMI 181
+G SV ++ N LC K L A+ +L KMP+ +P+++ YN ++ FC++ M
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLG-RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 182 AADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALL 241
A E ++ M YPDI+TY +M+ C G++EDA + + GC+ L+ Y+ ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 242 DGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALG 301
DG+ + G +A++LL EM + D P+ +TY+S++ +G + EA+ E +G
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAK--DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 302 CAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAE 361
PN VT ++++ G C D A + ++ G + Y+ L+ L KEA
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 362 KLFSKMLASGV 372
+L +++ G+
Sbjct: 575 ELLNELCNKGL 585
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 171/330 (51%), Gaps = 13/330 (3%)
Query: 61 CVIE----VLHRCFPSQSQMGIRFFIWAALQSSYRHSS-FMYNRACEMSRIKQNPSIIID 115
CVIE V H QS + FF WA + Y H S YN ++S + +
Sbjct: 116 CVIEKCGSVRHGIPLHQS---LAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWH 172
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
+++ K +S++ ++ +A LA+EA+ +M ++ PD I ++ VI
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS 232
Query: 176 EKGDMIAADELMKGMGLIDLY-PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANL 234
K A L D + PD+I Y ++++G+C AG + +A +FK MK G N+
Sbjct: 233 RKRRASEAQSFFD--SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNV 290
Query: 235 VAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGIL 294
YS ++D +CR G + RA ++ +M G C+PN +T+ +++++ G ++ L +
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSG--CAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 295 DRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRT 354
++M+ LGC P+ +T + LI+ C + NL+ A ++++ ++ + ++++ + +
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKK 408
Query: 355 KRLKEAEKLFSKMLASGVKPDGLACSVMIR 384
+ + A +++SKM+ + +P+ + ++++R
Sbjct: 409 RDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
P+ I +NN++R+ + G ++ M + PD ITY +I+ C LE+A +
Sbjct: 323 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
M + C N ++ + I + + A + +M + C PN VTY ++++F
Sbjct: 383 LNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME--AKCEPNTVTYNILMRMF 440
Query: 282 CGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVS-S 340
G L + M+ PN T L+ FC G+ + AY+L ++V ++ S
Sbjct: 441 VGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPS 500
Query: 341 GGCYSSLVVELVRTKRLKEAEKLFSKMLASGV 372
Y ++ +L R +LK+ E+L KM+ G+
Sbjct: 501 LSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 167 YNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMK 226
YN +I L + A L+ M ++ I T+ +I+ + AG +A F M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 227 RHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGM 286
+GC + +A+S ++ + R RA E + P+V+ YT++++ +C G
Sbjct: 214 DYGCVPDKIAFSIVISNLSR---KRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGE 270
Query: 287 MKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSS 346
+ EA + M+ G PN T S +I C G + A+ + ++ G + +++
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 347 LVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
L+ V+ R ++ +++++M G +PD + + +I C
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 115/262 (43%), Gaps = 5/262 (1%)
Query: 202 YVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEME 261
Y MI + + A L +MK ++ ++ L+ R G A+ ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 262 KEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGN 321
G C P+ + ++ VI K EA D ++ P+ + + L++G+C G
Sbjct: 214 DYG--CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGE 270
Query: 322 LDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSV 381
+ EA ++ ++ G + YS ++ L R ++ A +F+ ML SG P+ + +
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 382 MIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLK 441
++R G+ + +Y ++K+G D+ ++ L+ CR + A K+ M+K
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLG--CEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 442 KRIWLQGPYVDKIVEHLKKSGD 463
K+ + + I +++K D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRD 410
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 5/179 (2%)
Query: 94 SFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLR 153
+ YN E +N + V+ ++ C V+ IF EK R N A +
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 154 KMPEFDLRPDTIIYNNVIRLF--CEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCN 211
KM E P+T+ YN ++R+F + DM+ ++ K M ++ P++ TY ++ FC
Sbjct: 420 KMMEAKCEPNTVTYNILMRMFVGSKSTDMVL--KMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Query: 212 AGRLEDACGLFKVMKRHGC-AANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSP 269
G +A LFK M C +L Y +L + R G +++ EL+ +M ++G P
Sbjct: 478 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARP 536
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 8/332 (2%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
VI LC +R A+ V+ KM +F PD + +++I FC+ + A +L+ M +
Sbjct: 110 VINCLCRCSRFV-IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
PD++ Y ++I G C G + DA LF M+R G A+ V Y++L+ G+C G A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
L+ +M D PNV+T+T+VI +F +G EA+ + + M P+ T ++LI
Sbjct: 229 ARLMRDMVMR--DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G C+ G +DEA Q++D +V G + Y++L+ ++KR+ E KLF +M G+
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAA 433
D + + +I+ G+ ++ ++ S + +S+LL GLC +A
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMD-----SRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 434 KLARFMLKKRIWLQGPYVDKIVEHLKKSGDEE 465
L M K I L + ++ + K G+ E
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 171/346 (49%), Gaps = 11/346 (3%)
Query: 94 SFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLR 153
S + N C+ +R+ ID+V +E G V + I + K L N+A+ +
Sbjct: 143 SSLINGFCQGNRVFD----AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 154 KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAG 213
+M +R D + YN+++ C G A LM+ M + D+ P++IT+ ++I F G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVT 273
+ +A L++ M R ++ Y++L++G+C G ++ A ++L M +G C P+VVT
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG--CLPDVVT 316
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
Y ++I FC + E + M G + +T +T+I+G+ G D A ++ ++
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
+ ++ + YS L+ L R+++A LF M S ++ D +++I +C G V
Sbjct: 377 SRPNIRT---YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 394 EGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
+ + L+ + G V S ++ ++ G CRK ++ L R M
Sbjct: 434 DAWDLFRSLSCKGLKPDVVS--YTTMISGFCRKRQWDKSDLLYRKM 477
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
+EAM + +M + PD YN++I C G + A +++ M PD++TY ++
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I GFC + R+++ LF+ M + G + + Y+ ++ G + G + A E+ M
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM----- 375
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
D PN+ TY+ ++ C +++AL + + M+ + T + +I G C GN+++A
Sbjct: 376 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 326 YQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKP 374
+ L + G Y++++ R ++ +++ L+ KM G+ P
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 4/245 (1%)
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
D+ +Y +I C R A + M + G ++V S+L++G C+ + A++L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
+ME+ G P+VV Y ++I C G++ +A+ + DRME G + VT ++L+ G C
Sbjct: 163 SKMEEMG--FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G +A +L+ +V V + +++++ V+ + EA KL+ +M V PD
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 378 ACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR 437
+ +I LC+ G+V E + + + G L V + ++ L+ G C+ E KL R
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT--YNTLINGFCKSKRVDEGTKLFR 338
Query: 438 FMLKK 442
M ++
Sbjct: 339 EMAQR 343
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 123 EGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIA 182
+GC+ V + N K++ +E + R+M + L DTI YN +I+ + + G A
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 183 ADE--------------------------------LMKGMGLIDLYPDIITYVSMIKGFC 210
A E L + M ++ DI TY +I G C
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
G +EDA LF+ + G ++V+Y+ ++ G CR +++ L +M+++G
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 197 PDIITYVSMIKGFCNAGR-----LEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSME 251
P I+ ++S G + + LE+ LF M + ++V +S +L I + + +
Sbjct: 27 PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD 86
Query: 252 RALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTIST 311
+ L ME G ++ +Y VI C AL ++ +M G P+ VT+S+
Sbjct: 87 LVISLFHHMEVCG--IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSS 144
Query: 312 LIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASG 371
LI GFC +GN R+ +A L SKM G
Sbjct: 145 LINGFC-QGN----------------------------------RVFDAIDLVSKMEEMG 169
Query: 372 VKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVE 431
+PD + + +I C G V + L++ +E+ G + D+ ++ L+ GLC +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA--DAVTYNSLVAGLCCSGRWSD 227
Query: 432 AAKLARFMLKKRI 444
AA+L R M+ + I
Sbjct: 228 AARLMRDMVMRDI 240
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 163/309 (52%), Gaps = 9/309 (2%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
V + ++ C + R++ +A+ ++ KM E +PD + YN +I C+ + A + K
Sbjct: 156 VTIGSLVNGFCRRNRVS-DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
+ + P+++TY +++ G CN+ R DA L M + N++ YSALLD + G
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
+ A EL EM + D P++VTY+S+I C + EA + D M + GC + V+
Sbjct: 275 KVLEAKELFEEMVRMSID--PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
+TLI GFC +++ +L ++ G VS+ Y++L+ + + +A++ FS+M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 369 ASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRK 426
G+ PD ++++ LC G++ + ++ED++K +D DI ++ ++ G+C+
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK----REMDLDIVTYTTVIRGMCKT 448
Query: 427 NHSVEAAKL 435
EA L
Sbjct: 449 GKVEEAWSL 457
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 148 AMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIK 207
A+ +L KM + PD + +++ FC + + A L+ M I PDI+ Y ++I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 208 GFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDC 267
C R+ DA FK ++R G N+V Y+AL++G+C A LL +M K+
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK--KI 256
Query: 268 SPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQ 327
+PNV+TY++++ F G + EA + + M + P+ VT S+LI G C+ +DEA Q
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 328 LIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
+ D +V+ G ++ Y++L+ + KR+++ KLF +M G+ + + + +I+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 388 LGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQ 447
G V + + ++ G S D +++LL GLC +A + M K+ + L
Sbjct: 377 QAGDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 448 GPYVDKIVEHLKKSGDEE 465
++ + K+G E
Sbjct: 435 IVTYTTVIRGMCKTGKVE 452
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 150/282 (53%), Gaps = 3/282 (1%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
V ++ LC +R ++ A +L M + + P+ I Y+ ++ F + G ++ A EL +
Sbjct: 226 VTYTALVNGLCNSSRWSDAAR-LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
M + + PDI+TY S+I G C R+++A +F +M GC A++V+Y+ L++G C+
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
+E ++L EM + G N VTY ++IQ F G + +A +M+ G +P+ T
Sbjct: 345 RVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
+ L+ G C G L++A + + + Y++++ + +T +++EA LF +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 369 ASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSS 410
G+KPD + + M+ LC G + E LY +++ G + +
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 166/340 (48%), Gaps = 12/340 (3%)
Query: 96 MYNRACEMSRIKQNPSIIIDVVE-AYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRK 154
+ N C +R+ S++ +VE YK + V +I +LC+ R+ N+A ++
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPD----IVAYNAIIDSLCKTKRV-NDAFDFFKE 215
Query: 155 MPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGR 214
+ +RP+ + Y ++ C A L+ M + P++ITY +++ F G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 215 LEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTY 274
+ +A LF+ M R ++V YS+L++G+C ++ A ++ M +G C +VV+Y
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG--CLADVVSY 333
Query: 275 TSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVA 334
++I FC +++ + + M G N VT +TLI+GF G++D+A + ++
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 335 GGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLE 394
G Y+ L+ L L++A +F M + D + + +IR +C G+V E
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 395 GFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKN--HSVEA 432
+ L+ + G + + ++ ++ GLC K H VEA
Sbjct: 454 AWSLFCSLSLKGLKPDIVT--YTTMMSGLCTKGLLHEVEA 491
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 123 EGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIA 182
+GC+ V + N KA+ + M + R+M + L +T+ YN +I+ F + GD+
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 183 ADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLD 242
A E M + PDI TY ++ G C+ G LE A +F+ M++ ++V Y+ ++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 243 GICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGC 302
G+C+ G +E A L + +G P++VTYT+++ C KG++ E + +M+ G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKG--LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 303 APNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGG-------SVSSGGCYSSL 347
N T+S +G++ + +LI K+++ G + SG C +L
Sbjct: 502 MKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL 545
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 148/318 (46%), Gaps = 4/318 (1%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
N+A+ + M + P + +N ++ + L K M ++ + D+ T+ +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I FC ++ A + M + G + V +L++G CR + A+ L+ +M + G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG- 185
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
P++V Y ++I C + +A +E G PN VT + L+ G C +A
Sbjct: 186 -YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 326 YQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRE 385
+L+ ++ + YS+L+ V+ ++ EA++LF +M+ + PD + S +I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 386 LCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIW 445
LCL ++ E +++ + G L+ V S ++ L+ G C+ + KL R M ++ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVS--YNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 446 LQGPYVDKIVEHLKKSGD 463
+ +++ ++GD
Sbjct: 363 SNTVTYNTLIQGFFQAGD 380
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 43/266 (16%)
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVT 273
+L DA LF M + ++V ++ LL I +L + + L +ME G ++ T
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG--IRNDLYT 122
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
+ VI FC + AL IL +M LG P+RVTI +L+ GFC + +A L+DK+V
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC------ 387
G Y++++ L +TKR+ +A F ++ G++P+ + + ++ LC
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 388 -----------------------------LGGQVLEGFCLYEDIEKIGFLSSVDSDI--H 416
G+VLE L+E++ ++ S+D DI +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM----SIDPDIVTY 298
Query: 417 SVLLLGLCRKNHSVEAAKLARFMLKK 442
S L+ GLC + EA ++ M+ K
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSK 324
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 153/288 (53%), Gaps = 5/288 (1%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
+EA+ ++ +M L+PD YN +IR C++G + A E+++ + L PD+I+Y +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
++ N G+ E+ L M C N+V YS L+ +CR G +E A+ LL M+++G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG- 363
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
+P+ +Y +I FC +G + A+ L+ M + GC P+ V +T++ C G D+A
Sbjct: 364 -LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 326 YQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRE 385
++ K+ G + Y+++ L + A + +M+++G+ PD + + MI
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 386 LCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAA 433
LC G V E F L D+ F SV + ++++LLG C K H +E A
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVT--YNIVLLGFC-KAHRIEDA 527
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 153/298 (51%), Gaps = 6/298 (2%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
+M+K+ C E++ +L M PD I+ +I+ F ++ A +M+
Sbjct: 90 TQMLKIFHRSCRSGNYI-ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
+ PD+ Y ++I GFC R++DA + M+ + + V Y+ ++ +C G
Sbjct: 149 ILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
++ AL++L ++ + +C P V+TYT +I+ +G + EAL ++D M + G P+ T
Sbjct: 208 KLDLALKVLNQLLSD--NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
+T+I+G C EG +D A++++ + G Y+ L+ L+ + +E EKL +KM
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 369 ASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRK 426
+ P+ + S++I LC G++ E L + +++ G + D+ + L+ CR+
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL--TPDAYSYDPLIAAFCRE 381
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 149/308 (48%), Gaps = 5/308 (1%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I +C++ + + A ++R + PD I YN ++R +G ++LM M
Sbjct: 269 IIRGMCKEG-MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
P+++TY +I C G++E+A L K+MK G + +Y L+ CR G ++ A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
+E L M +G C P++V Y +V+ C G +AL I ++ +GC+PN + +T+
Sbjct: 388 IEFLETMISDG--CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G+ A +I ++++ G Y+S++ L R + EA +L M +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAA 433
P + ++++ C ++ + + E + +G + ++VL+ G+ + EA
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESM--VGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 434 KLARFMLK 441
+LA +++
Sbjct: 564 ELANDLVR 571
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 147/290 (50%), Gaps = 9/290 (3%)
Query: 175 CEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANL 234
C G+ I + L++ M PD+I +IKGF + A + +++++ G ++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 235 VAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGIL 294
AY+AL++G C++ ++ A +L M + D SP+ VTY +I C +G + AL +L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSK--DFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 295 DRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRT 354
+++ + C P +T + LI+ +EG +DEA +L+D++++ G Y++++ + +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 355 KRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSD 414
+ A ++ + G +PD ++ ++++R L G+ EG E + F D +
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG----EKLMTKMFSEKCDPN 332
Query: 415 I--HSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSG 462
+ +S+L+ LCR EA L + M +K + D ++ + G
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 38/241 (15%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I LC ++ EAM +L+ M E L PD Y+ +I FC +G + A E ++ M
Sbjct: 339 LITTLCRDGKIE-EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
PDI+ Y +++ C G+ + A +F + GC+ N +Y+ + + G RA
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEA----------------------- 290
L ++ EM G D P+ +TY S+I C +GM+ EA
Sbjct: 458 LHMILEMMSNGID--PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 291 ------------LGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSV 338
+ +L+ M GC PN T + LI+G G EA +L + +V ++
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
Query: 339 S 339
S
Sbjct: 576 S 576
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 112 IIIDVVEAYKEEGCVVS-VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNV 170
+ I+ +E +GC+ V V+ LC+ + A++A+ + K+ E P++ YN +
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGK-ADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 171 IRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGC 230
GD I A ++ M + PD ITY SMI C G +++A L M+
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 231 AANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEA 290
++V Y+ +L G C+ +E A+ +L M G C PN TYT +I+ G EA
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESM--VGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 291 L 291
+
Sbjct: 563 M 563
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%)
Query: 122 EEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMI 181
E GC + +F+ + A+ ++ +M + PD I YN++I C +G +
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 182 AADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALL 241
A EL+ M + +P ++TY ++ GFC A R+EDA + + M +GC N Y+ L+
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Query: 242 DGICRLGSMERALELLGEM 260
+GI G A+EL ++
Sbjct: 551 EGIGFAGYRAEAMELANDL 569
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 20/312 (6%)
Query: 87 QSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLAN 146
QSS+ +M R ++ K +I+ + K E CVVS ++ I +
Sbjct: 51 QSSF---GYMVLRLVSANKFKAAEDLIVRM----KIENCVVSEDILLSICRGYGRVHRPF 103
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
+++ V KM +FD P Y V+ + E+ + A + K M I L P + + +I
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 207 KGFC-NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
K C N G ++ +F M + GC + Y L+ G+CR G ++ A +L EM ++
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-- 221
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
DC+P VVTYTS+I CG + EA+ L+ M++ G PN T S+L+ G C +G +A
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 326 YQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRE 385
+L + ++A G + Y++L+ L + ++++EA +L +M G+KPD
Sbjct: 282 MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA--------- 332
Query: 386 LCLGGQVLEGFC 397
L G+V+ GFC
Sbjct: 333 -GLYGKVISGFC 343
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 44/256 (17%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I LC R+ +EA + +M E D P + Y ++I C ++ A ++ M
Sbjct: 198 LISGLCRFGRI-DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
+ P++ TY S++ G C GR A LF++M GC N+V Y+ L+ G+C+ ++ A
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT----- 308
+ELL M +G P+ Y VI FC +EA LD M G PNR+T
Sbjct: 317 VELLDRMNLQG--LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 309 ------------------------------------ISTLIKGFCVEGNLDEAYQLIDKV 332
+ +L+K C +G +A QL+D++
Sbjct: 375 KTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Query: 333 VAGGSVSSGGCYSSLV 348
V G + S G + L+
Sbjct: 435 VTDGCIPSKGTWKLLI 450
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 171/337 (50%), Gaps = 20/337 (5%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F++N+A E + +++ + GC + + N LC++ + A+
Sbjct: 191 HGLFLHNKASEA----------VALIDRMVQRGCQPDLVTYGAVVNGLCKRGD-TDLALN 239
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L KM + + +IY+ VI C+ A L M + P++ITY S+I C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
N GR DA L M NLV +SAL+D + G + +A +L EM K D PN
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID--PN 357
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY+S+I FC + EA +L+ M C PN VT +TLI GFC +D+ +L
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G V + Y++L+ + + A+ +F +M++ GV P+ L ++++ LC G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHS--VLLLGLCR 425
++ + ++E +++ S+++ DI++ +++ G+C+
Sbjct: 478 KLAKAMVVFEYLQR----STMEPDIYTYNIMIEGMCK 510
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 143/279 (51%), Gaps = 5/279 (1%)
Query: 113 IIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
+++ +EA K E VV VI +LC K R ++A+ + +M +RP+ I Y+++I
Sbjct: 240 LLNKMEAAKIEANVVIYS--TVIDSLC-KYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
C G A L+ M + P+++T+ ++I F G+L A L++ M +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
N+ YS+L++G C L + A ++L M ++ DC PNVVTY ++I FC + + +
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRK--DCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+ M G N VT +TLI GF + D A + ++V+ G + Y+ L+ L
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQ 391
+ +L +A +F + S ++PD ++MI +C G+
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 4/289 (1%)
Query: 154 KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAG 213
KM + PD + N+++ FC + A L+ M + PD +T+ ++I G
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVT 273
+ +A L M + GC +LV Y A+++G+C+ G + AL LL +M E NVV
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM--EAAKIEANVVI 255
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
Y++VI C +AL + ME G PN +T S+LI C G +A +L+ ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
+ +S+L+ V+ +L +AEKL+ +M+ + P+ S +I C+ ++
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 394 EGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
E + E + + L +V + ++ L+ G C+ + +L R M ++
Sbjct: 376 EAKQMLELMIRKDCLPNVVT--YNTLINGFCKAKRVDKGMELFREMSQR 422
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 10/258 (3%)
Query: 190 MGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGS 249
M ++ + ++ TY +I FC RL A L M + G ++V ++LL+G C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 250 MERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTI 309
+ A+ L+ +M + G P+ VT+T++I EA+ ++DRM GC P+ VT
Sbjct: 164 ISDAVALVDQMVEMG--YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 310 STLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLA 369
++ G C G+ D A L++K+ A ++ YS+++ L + + +A LF++M
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 370 SGVKPDGLACSVMIRELCLGGQVLEGFCLYED-IEKIGFLSSVDSDI--HSVLLLGLCRK 426
GV+P+ + S +I LC G+ + L D IE+ ++ ++ S L+ +K
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-----KINPNLVTFSALIDAFVKK 336
Query: 427 NHSVEAAKLARFMLKKRI 444
V+A KL M+K+ I
Sbjct: 337 GKLVKAEKLYEEMIKRSI 354
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 196 YPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALE 255
+P II + ++ + + + M+ G + NL Y+ L++ CR + AL
Sbjct: 75 FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 256 LLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKG 315
LLG+M K G + P++VT S++ FC + +A+ ++D+M +G P+ VT +TLI G
Sbjct: 135 LLGKMMKLGYE--PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 316 FCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPD 375
+ EA LID++V G Y ++V L + A L +KM A+ ++ +
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 376 GLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ S +I LC + L+ ++E G +V + +S L+ LC +A++L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT--YSSLISCLCNYGRWSDASRL 310
Query: 436 ARFMLKKRI 444
M++++I
Sbjct: 311 LSDMIERKI 319
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 39/256 (15%)
Query: 215 LEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTY 274
L+DA GLF VM + +++ +S LL I ++ + + +ME G S N+ TY
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG--ISHNLYTY 116
Query: 275 TSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVA 334
+I FC + AL +L +M LG P+ VT+++L+ GFC GN
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC-HGN------------- 162
Query: 335 GGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLE 394
R+ +A L +M+ G KPD + + +I L L + E
Sbjct: 163 ---------------------RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE 201
Query: 395 GFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKI 454
L + + + G D + ++ GLC++ + A L M +I +
Sbjct: 202 AVALIDRMVQRG--CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 455 VEHLKKSGDEELITNL 470
++ L K E+ NL
Sbjct: 260 IDSLCKYRHEDDALNL 275
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 184/391 (47%), Gaps = 49/391 (12%)
Query: 87 QSSYRHSSFMYNRA----CEMSRIKQNPSIIIDVVEAYKEEGCVVSV-KMMKVIFNLCEK 141
+S Y + YN C+ R K I++++ K +G V +I +LC
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKA----AIELLDHMKSKGVDADVCTYNMLIHDLCRS 276
Query: 142 ARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGM----------- 190
R+A + +LR M + + P+ + YN +I F +G ++ A +L+ M
Sbjct: 277 NRIA-KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 191 --GLID----------------------LYPDIITYVSMIKGFCNAGRLEDACGLFKVMK 226
LID L P ++Y ++ G C + A G + MK
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 227 RHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGM 286
R+G + Y+ ++DG+C+ G ++ A+ LL EM K+G D P++VTY+++I FC G
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID--PDIVTYSALINGFCKVGR 453
Query: 287 MKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSS 346
K A I+ R+ +G +PN + STLI C G L EA ++ + ++ G ++
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 347 LVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
LV L + ++ EAE+ M + G+ P+ ++ +I G+ L+ F +++++ K+G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 407 FLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR 437
+ + + LL GLC+ H EA K +
Sbjct: 574 HHPTFFT--YGSLLKGLCKGGHLREAEKFLK 602
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 22/370 (5%)
Query: 81 FIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCV---VSVKMMKVIFN 137
F++ AL ++YR + + + R+ +I D +E ++ G SV I
Sbjct: 107 FVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 166
Query: 138 LCEKARLANEAMW-VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLY 196
K+ + ++W L++M + + PD +N +I + C +G + LM+ M
Sbjct: 167 SVVKSG-EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 225
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P I+TY +++ +C GR + A L MK G A++ Y+ L+ +CR + + L
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
L +M K PN VTY ++I F +G + A +L+ M + G +PN VT + LI G
Sbjct: 286 LRDMRKRM--IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
EGN EA ++ + A G S Y L+ L + A + +M +GV
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRKNHSVEAAK 434
+ + MI LC G + E L ++ K G +D DI +S L+ G C K
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDG----IDPDIVTYSALINGFC---------K 450
Query: 435 LARFMLKKRI 444
+ RF K I
Sbjct: 451 VGRFKTAKEI 460
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 136/282 (48%), Gaps = 3/282 (1%)
Query: 125 CVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD 184
CV + +I LC+ L +EA+ +L +M + + PD + Y+ +I FC+ G A
Sbjct: 400 CVGRITYTGMIDGLCKNGFL-DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 458
Query: 185 ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244
E++ + + L P+ I Y ++I C G L++A +++ M G + ++ L+ +
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518
Query: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAP 304
C+ G + A E + M +G PN V++ +I + G +A + D M +G P
Sbjct: 519 CKAGKVAEAEEFMRCMTSDG--ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576
Query: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364
T +L+KG C G+L EA + + + A + Y++L+ + ++ L +A LF
Sbjct: 577 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636
Query: 365 SKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
+M+ + PD + +I LC G+ + ++ E G
Sbjct: 637 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 176/410 (42%), Gaps = 52/410 (12%)
Query: 40 QKNPNNIEKTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNR 99
+ + + I+ + T A ++ C + F + ++ R + + +S+ +YN
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGR----FKTAKEIVCRIYRVGLSPNGIIYSTLIYN- 482
Query: 100 ACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKV-IFNLCEKARLANEAMWVLRKMPEF 158
C M +K+ I + EA EG V + +LC+ ++A EA +R M
Sbjct: 483 CCRMGCLKE----AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA-EAEEFMRCMTSD 537
Query: 159 DLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDA 218
+ P+T+ ++ +I + G+ + A + M + +P TY S++KG C G L +A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 219 CGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM------------------ 260
K + A + V Y+ LL +C+ G++ +A+ L GEM
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 261 ---------------EKEG-GDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAP 304
E E G+ PN V YT + G K + ++M+ LG P
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717
Query: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364
+ VT + +I G+ G +++ L+ ++ + Y+ L+ + K + + L+
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 365 SKMLASGVKPDGLACSVMIRELC------LGGQVLEGF-CLYEDIEKIGF 407
++ +G+ PD L C ++ +C +G ++L+ F C ++++ F
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 138/307 (44%), Gaps = 7/307 (2%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
LC+ L EA L+ + DT++YN ++ C+ G++ A L M + P
Sbjct: 588 LCKGGHL-REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHG-CAANLVAYSALLDGICRLGSMERALEL 256
D TY S+I G C G+ A K + G N V Y+ +DG+ + G + +
Sbjct: 647 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 706
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
+M+ G +P++VT ++I + G +++ +L M PN T + L+ G+
Sbjct: 707 REQMDNLGH--TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
++ ++ L ++ G + SLV+ + + L+ K+ + GV+ D
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+++I + C G++ F L + + +G S+D D ++ + +NH + +++
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGI--SLDKDTCDA-MVSVLNRNHRFQESRMV 881
Query: 437 RFMLKKR 443
+ K+
Sbjct: 882 LHEMSKQ 888
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 4/274 (1%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
PD + ++++ CE + +++K + D T+ +I C G + A L
Sbjct: 787 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
KVM G + + A++ + R + + +L EM K+G SP Y +I
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG--ISPESRKYIGLINGL 904
Query: 282 CGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSG 341
C G +K A + + M A P V S +++ G DEA L+ ++ V +
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 342 GCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYED 401
+++L+ + + EA +L M G+K D ++ +V+I LC G + F LYE+
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 402 IEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
++ GFL++ + + L+ GL + + A +
Sbjct: 1025 MKGDGFLANATT--YKALIRGLLARETAFSGADI 1056
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%)
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVS 204
A+EA +LR M + L P + ++ L C+ G++I A EL M L D+++Y
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 205 MIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244
+I G C G + A L++ MK G AN Y AL+ G+
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 128 SVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELM 187
S K + +I LC + A V +M + P + + ++R + G A L+
Sbjct: 894 SRKYIGLINGLCRVGDIKT-AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 952
Query: 188 KGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRL 247
+ M + L P I ++ +++ C G + +A L VM G +LV+Y+ L+ G+C
Sbjct: 953 RFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1012
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQ 279
G M A EL EM+ +G N TY ++I+
Sbjct: 1013 GDMALAFELYEEMKGDG--FLANATTYKALIR 1042
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 178/355 (50%), Gaps = 7/355 (1%)
Query: 122 EEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDM 180
+ G ++V + ++ N C++ ++ +A V ++ + L+P + +N +I +C+ G++
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNIS-DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 181 IAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSAL 240
L M PD+ TY ++I C +++ A GLF M + G N V ++ L
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 241 LDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAL 300
+ G R G ++ E +M +G P++V Y +++ FC G + A I+D M
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKG--LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 301 GCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEA 360
G P+++T +TLI GFC G+++ A ++ ++ G +S+LV + + R+ +A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 361 EKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLL 420
E+ +ML +G+KPD + ++M+ C G GF L ++++ G + SV + ++VLL
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT--YNVLL 527
Query: 421 LGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVE-HLKKSGDEELITNLPKIG 474
GLC+ A L ML + + ++E H + + + P+IG
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIG 582
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 30 SPAERFYTHLQKNPNNIEKTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQSS 89
S A++ + + K +++ T+ + ++ C + L F + QM +S
Sbjct: 257 SDAQKVFDEITKR--SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME---------KSR 305
Query: 90 YRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAM 149
R F Y+ A + K+N +D +E C + VIF N +
Sbjct: 306 TRPDVFTYS-ALINALCKENK---MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 150 WVLR----KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
+++ KM L+PD ++YN ++ FC+ GD++AA ++ GM L PD ITY ++
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I GFC G +E A + K M ++G + V +SAL+ G+C+ G + A L EM + G
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG- 480
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
P+ VTYT ++ FC KG + +L M++ G P+ VT + L+ G C G + A
Sbjct: 481 -IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 326 YQLIDKVVAGGSVSSGGCYSSLV 348
L+D ++ G V Y++L+
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLL 562
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 161/310 (51%), Gaps = 9/310 (2%)
Query: 98 NRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPE 157
N C +R+++ S++ +VE + V+ +I +LC+ + N A+ + +M
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTT---IIDSLCKNGHV-NYALSLFDQMEN 205
Query: 158 FDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLED 217
+ +RPD ++Y +++ C G AD L++GM + PD+IT+ ++I F G+ D
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 218 ACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSV 277
A L+ M R A N+ Y++L++G C G ++ A ++ ME +G C P+VV YTS+
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG--CFPDVVAYTSL 323
Query: 278 IQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGS 337
I FC + +A+ I M G N +T +TLI+GF G + A ++ +V+ G
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Query: 338 VSSGGCYSSLVVELVRTKRLKEAEKLFSKMLA---SGVKPDGLACSVMIRELCLGGQVLE 394
+ Y+ L+ L ++K+A +F M GV P+ +V++ LC G++ +
Sbjct: 384 PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Query: 395 GFCLYEDIEK 404
++ED+ K
Sbjct: 444 ALMVFEDMRK 453
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 185/438 (42%), Gaps = 91/438 (20%)
Query: 82 IWAALQSSYRH------SSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVI 135
W +YR S +N A ++ + +++ K + +K V+
Sbjct: 32 FWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV 91
Query: 136 FNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDL 195
NLC+ ++ + D N ++ FC+ A + M +
Sbjct: 92 INLCDHLQIMG-------------VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 196 YPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALE 255
PDI+T+ S+I GFC R+E+A + M G ++V Y+ ++D +C+ G + AL
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 256 LLGEMEKEG-------------GDCS--------------------PNVVTYTSVIQIFC 282
L +ME G G C+ P+V+T+ ++I F
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 283 GKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQL---------IDKVV 333
+G +A + + M + APN T ++LI GFC+EG +DEA Q+ VV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 334 AGGSVSSGGC--------------------------YSSLVVELVRTKRLKEAEKLFSKM 367
A S+ +G C Y++L+ + + A+++FS M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCR 425
++ GV P+ +V++ LC G+V + ++ED++K + V +I ++VLL GLC
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE-MDGVAPNIWTYNVLLHGLCY 437
Query: 426 KNHSVEAAKLARFMLKKR 443
N +E A + ++KR
Sbjct: 438 -NGKLEKALMVFEDMRKR 454
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 160/333 (48%), Gaps = 45/333 (13%)
Query: 113 IIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVI 171
+ D +E Y G V M + N LC R +A +LR M + ++PD I +N +I
Sbjct: 199 LFDQMENY---GIRPDVVMYTSLVNGLCNSGRW-RDADSLLRGMTKRKIKPDVITFNALI 254
Query: 172 RLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCA 231
F ++G + A+EL M + + P+I TY S+I GFC G +++A +F +M+ GC
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 232 ANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF---------- 281
++VAY++L++G C+ ++ A+++ EM ++G + N +TYT++IQ F
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG--LTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 282 -------------------------CGKGMMKEALGILDRM---EALGCAPNRVTISTLI 313
C G +K+AL I + M E G APN T + L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G C G L++A + + + Y+ ++ + + ++K A LF + + GVK
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
P+ + + MI L G E L+ +++ G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 49/267 (18%)
Query: 206 IKGFCN----------AGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALE 255
++ FCN + + +A LF M +++ ++ LL+ I ++ + +
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 256 LLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKG 315
L ++ G S ++ T ++ FC A L +M LG P+ VT ++LI G
Sbjct: 94 LCDHLQIMG--VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING 151
Query: 316 FCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPD 375
FC+ GN R++EA + ++M+ G+KPD
Sbjct: 152 FCL-GN----------------------------------RMEEAMSMVNQMVEMGIKPD 176
Query: 376 GLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ + +I LC G V L++ +E G D +++ L+ GLC +A L
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP--DVVMYTSLVNGLCNSGRWRDADSL 234
Query: 436 ARFMLKKRIWLQGPYVDKIVEHLKKSG 462
R M K++I + +++ K G
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEG 261
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 110 PSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLR---PDTI 165
P++ +V G +++ V+ + LC ++ +A+ + M + ++ P+
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK-KALMIFEDMQKREMDGVAPNIW 426
Query: 166 IYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVM 225
YN ++ C G + A + + M ++ IITY +I+G C AG++++A LF +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 226 KRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
G N+V Y+ ++ G+ R G A L +M+++G
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 149/298 (50%), Gaps = 5/298 (1%)
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDL-YPDIITYV 203
A +A+ +L M F PD + YN +I+ FC+ ++ A E+ K + + PD++TY
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 204 SMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKE 263
SMI G+C AG++ +A L M R G V ++ L+DG + G M A E+ G+M
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 264 GGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLD 323
G C P+VVT+TS+I +C G + + + + M A G PN T S LI C E L
Sbjct: 342 G--CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 324 EAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMI 383
+A +L+ ++ + + Y+ ++ + ++ EA + +M KPD + +++I
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 384 RELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLK 441
C+ G++ E ++ + IG S D S LL L + + EA L + K
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIG--CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 183/383 (47%), Gaps = 27/383 (7%)
Query: 72 SQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKM 131
+ +G RF+ ++ + + RHS + YN + + E K +G + ++
Sbjct: 81 NNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRL 140
Query: 132 MK-VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGM 190
+ ++ + EK +L +L+ F++ ++ N+++ ++ D + M
Sbjct: 141 LGFLVSSFAEKGKLHFATALLLQ---SFEVEGCCMVVNSLLN------TLVKLDRVEDAM 191
Query: 191 GLIDLY------PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244
L D + D T+ +I+G C G+ E A L VM GC ++V Y+ L+ G
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAP 304
C+ + +A E+ ++ K G CSP+VVTYTS+I +C G M+EA +LD M LG P
Sbjct: 252 CKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364
VT + L+ G+ G + A ++ K+++ G ++SL+ R ++ + +L+
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 365 SKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD----SDIHSVLL 420
+M A G+ P+ S++I LC ++L+ E +G L+S D +++ ++
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKA------RELLGQLASKDIIPQPFMYNPVI 424
Query: 421 LGLCRKNHSVEAAKLARFMLKKR 443
G C+ EA + M KK+
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKK 447
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
FK+ RH + Y+ L +C+ G + A ++ M+ +G SPN ++ F
Sbjct: 95 FKLNIRH----SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG--VSPNNRLLGFLVSSF 148
Query: 282 CGKGMMKEALGIL-DRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSS 340
KG + A +L E GC + +++L+ +++A +L D+ + S +
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 341 GGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYE 400
++ L+ L + ++A +L M G +PD + + +I+ C ++ + +++
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 401 DIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKK 460
D+ K G + S D ++ ++ G C+ EA+ L ML+ I+ + +V+ K
Sbjct: 266 DV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 461 SGD 463
+G+
Sbjct: 325 AGE 327
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 35/336 (10%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
P+ ++YN +I C+ G++ A EL+ M L D++TY +++ G C +GR DA +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
+ M + ++V ++AL+D + G+++ A EL EM + D PN VTY S+I
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--PNNVTYNSIINGL 291
Query: 282 CGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSG 341
C G + +A D M + GC PN VT +TLI GFC +DE +L ++ G +
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 342 GCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQV--------- 392
Y++L+ + +L+ A +F M++ V PD + +++ LC+ G++
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 393 ----------------LEGFCLYEDIEKIGFL--------SSVDSDIHSVLLLGLCRKNH 428
+ G C + +EK L D+ +++++LGLC+
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 429 SVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDE 464
EA +L R M ++ I Q D +E S E
Sbjct: 472 RREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKE 507
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 164/340 (48%), Gaps = 8/340 (2%)
Query: 105 RIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDT 164
R + ++ ++V + V +++ NL R ++ +KM + + D
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANL----RRYETVIYFSQKMELYGISHDL 106
Query: 165 IIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKV 224
+ +I FC + A ++ M + P I+T+ S++ GFC R+ DA L +
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 225 MKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGK 284
M + G N+V Y+ L+DG+C+ G + ALELL EMEK+G +VVTY +++ C
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG--LGADVVTYNTLLTGLCYS 224
Query: 285 GMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCY 344
G +A +L M P+ VT + LI F +GNLDEA +L +++ + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 345 SSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEK 404
+S++ L RL +A+K F M + G P+ + + +I C V EG L++ +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 405 IGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
GF + D ++ L+ G C+ A + +M+ +R+
Sbjct: 345 EGF--NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 162/330 (49%), Gaps = 4/330 (1%)
Query: 86 LQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARL 144
++S Y + +YN + +I ++++ +++G V + LC R
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 145 ANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVS 204
++ A +LR M + + PD + + +I +F ++G++ A EL K M + P+ +TY S
Sbjct: 228 SDAAR-MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 205 MIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
+I G C GRL DA F +M GC N+V Y+ L+ G C+ ++ ++L M EG
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 265 GDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDE 324
+ ++ TY ++I +C G ++ AL I M + P+ +T L+ G CV G ++
Sbjct: 347 FN--ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 325 AYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIR 384
A D + Y+ ++ L + ++++A +LF ++ GVKPD ++MI
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 385 ELCLGGQVLEGFCLYEDIEKIGFLSSVDSD 414
LC G E L +++ G + ++++
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQMNAE 494
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 43/272 (15%)
Query: 208 GFCNAGRLEDACGLF-----------------------------------KVMKRHGCAA 232
GF ++ R EDA LF + M+ +G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
+L +++ L+ CR + AL +LG+M K G + P++VT+ S++ FC + +A
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
++ M G PN V +TLI G C G L+ A +L++++ G + Y++L+ L
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD 412
+ R +A ++ M+ + PD + + +I G + E LY+++ + SSVD
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ----SSVD 278
Query: 413 SD--IHSVLLLGLCRKNHSVEAAKLARFMLKK 442
+ ++ ++ GLC +A K M K
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 148/277 (53%), Gaps = 3/277 (1%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
++ LCE R + A W+LR M + + P+ I + +I F + G ++ A EL M +
Sbjct: 229 LVTGLCEIGRWGDAA-WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
+YPD+ TY S+I G C G L++A +F +M+R+GC N V Y+ L+ G C+ +E
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
+++ EM ++G N +TYT +IQ +C G A + ++M + P+ T + L+
Sbjct: 348 MKIFYEMSQKG--VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G C G +++A + + + + Y+ ++ + + ++++A LF + + G+K
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 374 PDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSS 410
P+ + + MI C G + E L++ +++ GFL +
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 146/289 (50%), Gaps = 9/289 (3%)
Query: 139 CEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPD 198
C R+ +A+ + ++ +P+ + Y +IR C+ + A EL MG P+
Sbjct: 164 CHWNRI-EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 199 IITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLG 258
++TY +++ G C GR DA L + M + N++ ++AL+D ++G + A EL
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 259 EMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCV 318
M + P+V TY S+I C G++ EA + ME GC PN V +TLI GFC
Sbjct: 283 VMIQM--SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 319 EGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA 378
+++ ++ ++ G V++ Y+ L+ R A+++F++M + PD
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 379 CSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCR 425
+V++ LC G+V + ++E + K +D +I +++++ G+C+
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRK----REMDINIVTYTIIIQGMCK 445
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 158/323 (48%), Gaps = 22/323 (6%)
Query: 152 LRKMPEFDLRPDTIIYNNVIRLFCEKG---DMIAADELMKGMGLIDLYPDIITYVSMIKG 208
L KM + PD + + +++ +C D IA + + GMG P+++TY ++I+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF---KPNVVTYTTLIRC 197
Query: 209 FCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCS 268
C L A LF M +G N+V Y+AL+ G+C +G A LL +M K
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR--RIE 255
Query: 269 PNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQL 328
PNV+T+T++I F G + EA + + M + P+ T +LI G C+ G LDEA Q+
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 329 IDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCL 388
+ G + Y++L+ ++KR+++ K+F +M GV + + +V+I+ CL
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 389 GGQVLEGFCLYEDIEKIGF--LSS----VDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
G+ D+ + F +SS D ++VLL GLC +A + +M K+
Sbjct: 376 VGR--------PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 443 RIWLQGPYVDKIVEHLKKSGDEE 465
+ + I++ + K G E
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVE 450
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 170/344 (49%), Gaps = 8/344 (2%)
Query: 96 MYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKM 155
+ N C +RI+ ++ ++ + V +++ LC K R N A+ + +M
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC---LC-KNRHLNHAVELFNQM 214
Query: 156 PEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRL 215
RP+ + YN ++ CE G A L++ M + P++IT+ ++I F G+L
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
+A L+ VM + ++ Y +L++G+C G ++ A ++ ME+ G C PN V YT
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG--CYPNEVIYT 332
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
++I FC +++ + I M G N +T + LI+G+C+ G D A ++ +++ +
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
+ Y+ L+ L ++++A +F M + + + +++I+ +C G+V +
Sbjct: 393 RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Query: 396 FCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
F L+ + G +V + ++ ++ G CR+ EA L + M
Sbjct: 453 FDLFCSLFSKGMKPNVIT--YTTMISGFCRRGLIHEADSLFKKM 494
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 4/186 (2%)
Query: 121 KEEGCVVS-VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGD 179
+ GC + V +I C+ R+ + M + +M + + +TI Y +I+ +C G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRV-EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 180 MIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSA 239
A E+ M PDI TY ++ G C G++E A +F+ M++ N+V Y+
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 240 LLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEA 299
++ G+C+LG +E A +L + +G PNV+TYT++I FC +G++ EA + +M+
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKG--MKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 300 LGCAPN 305
G PN
Sbjct: 497 DGFLPN 502
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 9/259 (3%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P II + ++ R + LF+ M+ G L + ++ +C RA
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
LG+M K G + P++VT+TS++ +C +++A+ + D++ +G PN VT +TLI+
Sbjct: 141 LGKMMKLGFE--PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C +L+ A +L +++ GS + Y++LV L R +A L M+ ++P+
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ + +I G+++E LY + ++ V + + L+ GLC EA ++
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT--YGSLINGLCMYGLLDEARQM- 315
Query: 437 RFMLKKRIWLQGPYVDKIV 455
F L +R G Y ++++
Sbjct: 316 -FYLMER---NGCYPNEVI 330
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 145/288 (50%), Gaps = 15/288 (5%)
Query: 133 KVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGL 192
KV+ LC +++ A + +M L D Y ++ FC+ G + A + M
Sbjct: 488 KVLNYLCNASKM-ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 193 IDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMER 252
+ P+++TY ++I + A ++ A LF+ M GC N+V YSAL+DG C+ G +E+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 253 ALELLGEM------------EKEGGDCS--PNVVTYTSVIQIFCGKGMMKEALGILDRME 298
A ++ M K+ D S PNVVTY +++ FC ++EA +LD M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 299 ALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLK 358
GC PN++ LI G C G LDEA ++ ++ G ++ YSSL+ + KR
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 359 EAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
A K+ SKML + P+ + + MI LC G+ E + L + +E+ G
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 183/388 (47%), Gaps = 23/388 (5%)
Query: 47 EKTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRI 106
+K L + KL + VIEVL ++ I FF+WA Q Y+H++ +YN ++
Sbjct: 120 QKFLRQFREKLSESLVIEVLR--LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVR 177
Query: 107 KQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTII 166
+ + + ++ +++ V + + V+ + + A+ L ++ +F RP
Sbjct: 178 DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRST 237
Query: 167 YNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMK 226
YN +I+ F + + +A + + M L +L D T C G+ +A L ++
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VE 294
Query: 227 RHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGM 286
+ V Y+ L+ G+C E A++ L M C PNVVTY++++ CG +
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM--RATSCLPNVVTYSTLL---CG-CL 348
Query: 287 MKEALG----ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGG 342
K+ LG +L+ M GC P+ ++L+ +C G+ AY+L+ K+V G +
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 343 CYSSLVVELVRTKR------LKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGF 396
Y+ L+ + K L AEK +S+MLA+GV + + S R LC G+ + F
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 397 CLYEDIEKIGFLSSVDSDIHSVLLLGLC 424
+ ++ GF+ D+ +S +L LC
Sbjct: 469 SVIREMIGQGFIP--DTSTYSKVLNYLC 494
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 14/342 (4%)
Query: 101 CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFD 159
C+ R+++ ++ +A EGC + + + + LC+ +L +EA V +M E
Sbjct: 650 CKSHRVEEARKLL----DAMSMEGCEPNQIVYDALIDGLCKVGKL-DEAQEVKTEMSEHG 704
Query: 160 LRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDAC 219
Y+++I + + A +++ M P+++ Y MI G C G+ ++A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 220 GLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQ 279
L ++M+ GC N+V Y+A++DG +G +E LELL M +G +PN VTY +I
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG--VAPNYVTYRVLID 822
Query: 280 IFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVS 339
C G + A +L+ M+ + +I+GF E E+ L+D++ +
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAP 880
Query: 340 SGGCYSSLVVELVRTKRLKEAEKLFSKM--LASGVKPDGLACSVMIRELCLGGQVLEGFC 397
Y L+ L++ +RL+ A +L ++ ++ + + +I LCL +V F
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 398 LYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
L+ ++ K G + + S L+ GL R + EA L F+
Sbjct: 941 LFSEMTKKGVIPEMQS--FCSLIKGLFRNSKISEALLLLDFI 980
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 27/354 (7%)
Query: 101 CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDL 160
CE S ++ +D + + C+ +V + C + VL M
Sbjct: 313 CEASLFEE----AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 161 RPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC------NAGR 214
P I+N+++ +C GD A +L+K M P + Y +I C N
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 215 LEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTY 274
L+ A + M G N + S+ +C G E+A ++ EM +G P+ TY
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF--IPDTSTY 486
Query: 275 TSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVA 334
+ V+ C M+ A + + M+ G + T + ++ FC G +++A + +++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 335 GGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQV-- 392
G + Y++L+ ++ K++ A +LF ML+ G P+ + S +I C GQV
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 393 ----LEGFCLYEDIEKIG-FLSSVDSD-------IHSVLLLGLCRKNHSVEAAK 434
E C +D+ + + D + + LL G C K+H VE A+
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC-KSHRVEEAR 659
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 8/251 (3%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
PDT+ Y +I CE A + + M P+++TY +++ G N +L +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
+M GC + +++L+ C G A +LL +M K G P V Y +I
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH--MPGYVVYNILIGSI 417
Query: 282 CGK------GMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
CG ++ A M A G N++ +S+ + C G ++A+ +I +++
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
G + YS ++ L +++ A LF +M G+ D ++M+ C G + +
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 396 FCLYEDIEKIG 406
+ ++ ++G
Sbjct: 538 RKWFNEMREVG 548
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 9/336 (2%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
+VE + C +V VI ++CE L E R++ E P +YN +I C
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVG-LVKEG----RELAE-RFEPVVSVYNALINGLC 257
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
++ D A ELM+ M + P++I+Y ++I CN+G++E A M + GC N+
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILD 295
S+L+ G G+ AL+L +M + G PNVV Y +++Q FC G + +A+ +
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIR-GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 296 RMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
ME +GC+PN T +LI GF G+LD A + +K++ G + Y+++V L R
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436
Query: 356 RLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI 415
+ KEAE L M P + I+ LC G++ ++ +E+ +
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ-QHRCPPNIVT 495
Query: 416 HSVLLLGLCRKNHSVEAAKLARFMLKKRI-WLQGPY 450
++ LL GL + N EA L R + + + W Y
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 158 FDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLED 217
F L+P+ + YN +++ FC G+++ A + M I P+I TY S+I GF G L+
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 218 ACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSV 277
A ++ M GC N+V Y+ +++ +CR + A L+ M KE +C+P+V T+ +
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE--NCAPSVPTFNAF 463
Query: 278 IQIFCGKGMMKEALGILDRMEALG-CAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGG 336
I+ C G + A + +ME C PN VT + L+ G ++EAY L ++ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 337 SVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGF 396
S Y++L+ A +L KM+ G PD + +++I C G+
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 397 CLYEDIEKIGFLSSVDSDIHSVLLLGLCRKN 427
+ + + D ++ ++ GLCR N
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSN 614
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 139/273 (50%), Gaps = 5/273 (1%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRL 173
+ V +E GC +++ + N K + A+++ KM P+ ++Y N++
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 174 FCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVM-KRHGCAA 232
C A+ L++ M + P + T+ + IKG C+AGRL+ A +F+ M ++H C
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
N+V Y+ LLDG+ + +E A L E+ G + S + TY +++ C G+ AL
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS--TYNTLLHGSCNAGLPGIALQ 549
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGC--YSSLVVE 350
++ +M G +P+ +T++ +I +C +G + A Q++D V G Y++++
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 351 LVRTKRLKEAEKLFSKMLASGVKPDGLACSVMI 383
L R+ ++ L +M+++G+ P SV+I
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 191/456 (41%), Gaps = 48/456 (10%)
Query: 39 LQKNPNNIE-KTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMY 97
L ++PN+ E K L VK +CV LH FF A + ++H+ +
Sbjct: 32 LTESPNHAEIKELDVVKRLRQESCVPLALH------------FFKSIANSNLFKHTPLTF 79
Query: 98 NRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPE 157
+ + +++ K +G S + + ++ + LA A+ + ++ E
Sbjct: 80 EVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE 139
Query: 158 FDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLED 217
F P IYN+V+ + + + + M P++ TY ++K C +++
Sbjct: 140 FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 218 ACGLFKVMKRHGCAANLVAYS------------------------------ALLDGICRL 247
A L M GC + V+Y+ AL++G+C+
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKE 259
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
+ A EL+ EM ++G SPNV++Y+++I + C G ++ A L +M GC PN
Sbjct: 260 HDYKGAFELMREMVEKG--ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAG-GSVSSGGCYSSLVVELVRTKRLKEAEKLFSK 366
T+S+L+KG + G +A L ++++ G G + Y++LV + +A +FS
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 367 MLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRK 426
M G P+ +I G + ++ + G +V +++ ++ LCR
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV--VVYTNMVEALCRH 435
Query: 427 NHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSG 462
+ EA L M K+ P + ++ L +G
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
G ++ LL +M+ +G CS ++ + SVI ++ G+ + A+ + R++ GC P+
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVK 147
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKM 367
+ ++ E + Y + + G + Y+ L+ L + ++ A+KL +M
Sbjct: 148 IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKN 427
G PD ++ + +I +C G V EG L E E + +++ L+ GLC+++
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-------VSVYNALINGLCKEH 260
Query: 428 HSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEEL 466
A +L R M++K I ++ L SG EL
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%)
Query: 140 EKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDI 199
E A+LANE M E L P+ +N ++ C+ G + AD L+K M +PDI
Sbjct: 409 EAAQLANE-------MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 200 ITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGE 259
T+ +I G+ ++E+A + VM +G ++ Y++LL+G+C+ E +E
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 260 MEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVE 319
M ++G C+PN+ T+ +++ C + EALG+L+ M+ P+ VT TLI GFC
Sbjct: 522 MVEKG--CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 320 GNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK-RLKEAEKLFSKMLASGVKPDGLA 378
G+LD AY L K+ VSS ++++ K + AEKLF +M+ + PDG
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 379 CSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARF 438
+M+ C G V G+ ++ + GF+ S+ + ++ LC ++ EAA +
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT--LGRVINCLCVEDRVYEAAGIIHR 697
Query: 439 MLKK 442
M++K
Sbjct: 698 MVQK 701
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 4/316 (1%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA+ V +M +D P YN ++ + + G A ++ M + PD+ ++ +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
K FC R A L M GC N+VAY ++ G EL G+M G
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG-- 211
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
S + T+ ++++ C KG +KE +LD++ G PN T + I+G C G LD A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
+++ ++ G Y++L+ L + + +EAE KM+ G++PD + +I
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWL 446
C GG V + D GF+ D + L+ GLC + + A L L K I
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVP--DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 447 QGPYVDKIVEHLKKSG 462
+ +++ L G
Sbjct: 390 NVILYNTLIKGLSNQG 405
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 159/367 (43%), Gaps = 37/367 (10%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I+ LC+ ++ EA L KM L PD+ YN +I +C KG M+ E + G +
Sbjct: 292 LIYGLCKNSKF-QEAEVYLGKMVNEGLEPDSYTYNTLIAGYC-KGGMVQLAERIVGDAVF 349
Query: 194 DLY-PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMER 252
+ + PD TY S+I G C+ G A LF G N++ Y+ L+ G+ G +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 253 ALELLGEMEKEG-------------GDCS--------------------PNVVTYTSVIQ 279
A +L EM ++G G C P++ T+ +I
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 280 IFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVS 339
+ + M+ AL ILD M G P+ T ++L+ G C ++ + +V G
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 340 SGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLY 399
+ ++ L+ L R ++L EA L +M V PD + +I C G + + L+
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 400 EDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLK 459
+E+ + S + +++++ K + A KL + M+ + + G +V+
Sbjct: 590 RKMEE-AYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 460 KSGDEEL 466
K+G+ L
Sbjct: 649 KTGNVNL 655
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 5/306 (1%)
Query: 137 NLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLY 196
+ C+ +R + A+ +L M + + Y V+ F E+ EL M +
Sbjct: 155 SFCKTSR-PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
+ T+ +++ C G +++ L + + G NL Y+ + G+C+ G ++ A+ +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
+G + ++G P+V+TY ++I C +EA L +M G P+ T +TLI G+
Sbjct: 274 VGCLIEQGP--KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C G + A +++ V G V Y SL+ L A LF++ L G+KP+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ + +I+ L G +LE L ++ + G + V + ++L+ GLC+ +A L
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT--FNILVNGLCKMGCVSDADGLV 449
Query: 437 RFMLKK 442
+ M+ K
Sbjct: 450 KVMISK 455
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 122 EEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMI 181
E+G + V+ ++ N K ++A +++ M PD +N +I + + M
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 182 AADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALL 241
A E++ M + PD+ TY S++ G C + ED +K M GCA NL ++ LL
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 242 DGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEA-- 299
+ +CR ++ AL LL EM+ + +P+ VT+ ++I FC G + A + +ME
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNK--SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 300 ------------------------------------LGCAPNRVTISTLIKGFCVEGNLD 323
LG P+ T ++ GFC GN++
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG--PDGYTYRLMVDGFCKTGNVN 654
Query: 324 EAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA--CSV 381
Y+ + +++ G + S ++ L R+ EA + +M+ G+ P+ + C V
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDV 714
Query: 382 MIRELCLGGQVLE 394
+E+ VLE
Sbjct: 715 DKKEVAAPKLVLE 727
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 202 YVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEME 261
YV +K + G++++A +F+ M + C + +Y+A++ + G ++A ++ M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 262 KEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGN 321
G +P+V ++T ++ FC AL +L+ M + GC N V T++ GF E
Sbjct: 139 DRG--ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 322 LDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSV 381
E Y+L K++A G ++ L+ L + +KE EKL K++ GV P+ ++
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 382 MIRELC----LGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEA 432
I+ LC L G V CL E K D ++ L+ GLC+ + EA
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPK------PDVITYNNLIYGLCKNSKFQEA 305
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 14/223 (6%)
Query: 90 YRHSSFMYNRACEMSRIKQNPSIIIDVVEAYK---EEGCVVSVKMMKVIFNLCEKARLAN 146
Y ++S + N C+ S+ + DV+E YK E+GC ++ ++ + R +
Sbjct: 497 YTYNSLL-NGLCKTSKFE-------DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGM-GLIDLYPDIITYVSM 205
EA+ +L +M + PD + + +I FC+ GD+ A L + M + TY +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I F + A LF+ M + Y ++DG C+ G++ + L EM + G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG- 667
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
P++ T VI C + + EA GI+ RM G P V
Sbjct: 668 -FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 44/274 (16%)
Query: 218 ACGLFKVMKRH-GCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTS 276
A +F M++ G L Y ++++ + G E E+L +M + G+ V Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV-YVG 81
Query: 277 VIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGG 336
++ + KG ++EA+ + +RM+ C P + + ++ G D+A+++ ++ G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 337 -----------------------------SVSSGGC------YSSLVVELVRTKRLKEAE 361
++SS GC Y ++V E
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 362 KLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLL 421
+LF KMLASGV + ++R LC G V E L + + K G L ++ + +++ +
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT--YNLFIQ 259
Query: 422 GLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIV 455
GLC++ A ++ +++ QGP D I
Sbjct: 260 GLCQRGELDGAVRMVGCLIE-----QGPKPDVIT 288
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 184/375 (49%), Gaps = 39/375 (10%)
Query: 94 SFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLR 153
S + N C R+ + +++ +VE K+ +V+V + I LC K R++ EA+ ++
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEM-KQRPDLVTVSTL--INGLCLKGRVS-EALVLID 199
Query: 154 KMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAG 213
+M E+ +PD + Y V+ C+ G+ A +L + M ++ ++ Y +I C G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM------------- 260
+DA LF M+ G A++V YS+L+ G+C G + ++L EM
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 261 ------EKEGG--------------DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAL 300
KEG +P+ +TY S+I FC + + EA + D M +
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 301 GCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEA 360
GC P+ VT S LI +C +D+ +L ++ + G + + Y++LV+ ++ +L A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 361 EKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLL 420
++LF +M++ GV P + +++ LC G++ + ++E ++K + I+++++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI--GIYNIII 497
Query: 421 LGLCRKNHSVEAAKL 435
G+C + +A L
Sbjct: 498 HGMCNASKVDDAWSL 512
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 159/317 (50%), Gaps = 5/317 (1%)
Query: 128 SVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELM 187
++ ++ C + R++ EA+ ++ +M E RPD + + +I C KG + A L+
Sbjct: 140 TITFSTLVNGFCLEGRVS-EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 188 KGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRL 247
M PD +TY ++ C +G A LF+ M+ A++V YS ++D +C+
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
GS + AL L EME +G +VVTY+S+I C G + +L M P+ V
Sbjct: 259 GSFDDALSLFNEMEMKG--IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKM 367
T S LI F EG L EA +L ++++ G Y+SL+ + L EA ++F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKN 427
++ G +PD + S++I C +V +G L+ +I G + + + ++ L+LG C+
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT--YNTLVLGFCQSG 434
Query: 428 HSVEAAKLARFMLKKRI 444
A +L + M+ + +
Sbjct: 435 KLNAAKELFQEMVSRGV 451
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 137/268 (51%), Gaps = 7/268 (2%)
Query: 144 LANEAMW-----VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPD 198
L N+ W +LR+M ++ PD + ++ +I +F ++G ++ A EL M + PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 199 IITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLG 258
ITY S+I GFC L +A +F +M GC ++V YS L++ C+ ++ + L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 259 EMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCV 318
E+ +G PN +TY +++ FC G + A + M + G P+ VT L+ G C
Sbjct: 410 EISSKG--LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 319 EGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA 378
G L++A ++ +K+ G Y+ ++ + ++ +A LF + GVKPD +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 379 CSVMIRELCLGGQVLEGFCLYEDIEKIG 406
+VMI LC G + E L+ +++ G
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 123 EGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIA 182
+GC + ++ N KA+ ++ M + R++ L P+TI YN ++ FC+ G + A
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 183 ADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLD 242
A EL + M + P ++TY ++ G C+ G L A +F+ M++ + Y+ ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 243 GICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGC 302
G+C ++ A L + +G P+VVTY +I C KG + EA + +M+ GC
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKG--VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 303 APNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEK 362
P+ T + LI+ L + +LI+++ G S+ +V++++ +RL +K
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG-FSADSSTIKMVIDMLSDRRL---DK 612
Query: 363 LFSKMLA 369
F ML+
Sbjct: 613 SFLDMLS 619
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P I + + + + G K M+ +G ++ + +++ CR + A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
LG K G + P+ +T+++++ FC +G + EA+ ++DRM + P+ VT+STLI G
Sbjct: 128 LGRAWKLGYE--PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C++G + EA LID++V G Y ++ L ++ A LF KM +K
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ S++I LC G + L+ ++E G + V + +S L+ GLC + AK+
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT--YSSLIGGLCNDGKWDDGAKML 303
Query: 437 RFMLKKRI 444
R M+ + I
Sbjct: 304 REMIGRNI 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA + +M + PDTI YN++I FC++ + A+++ M PDI+TY +I
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
+C A R++D LF+ + G N + Y+ L+ G C+ G + A EL EM G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-- 450
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRME---------------------------- 298
P+VVTY ++ C G + +AL I ++M+
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 299 ALGCA-------PNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVEL 351
+L C+ P+ VT + +I G C +G+L EA L K+ G Y+ L+
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 352 VRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
+ L + +L +M G D ++I L
Sbjct: 571 LGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 168/335 (50%), Gaps = 16/335 (4%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F++N+A E + +V+ + GC ++ V+ N LC++ + A+
Sbjct: 198 HGLFLHNKASEA----------VALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-TDLALN 246
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L KM + D +I+N +I C+ + A L K M + P+++TY S+I C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
+ GR DA L M NLV ++AL+D + G A +L +M K D P+
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID--PD 364
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY S++ FC + +A + + M + C P+ VT +TLIKGFC +++ +L
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G V Y++L+ L A+K+F +M++ GV PD + S+++ LC G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCR 425
++ + +++ ++K +D I++ ++ G+C+
Sbjct: 485 KLEKALEVFDYMQKSEI--KLDIYIYTTMIEGMCK 517
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 182/359 (50%), Gaps = 11/359 (3%)
Query: 113 IIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
+++ +EA K E VV +I +LC K R ++A+ + ++M +RP+ + Y+++I
Sbjct: 247 LLNKMEAAKIEADVVIFN--TIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
C G A +L+ M + P+++T+ ++I F G+ +A L+ M +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
++ Y++L++G C +++A ++ M + DC P+VVTY ++I+ FC +++
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK--DCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+ M G + VT +TLI+G +G+ D A ++ ++V+ G YS L+ L
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD 412
+L++A ++F M S +K D + MI +C G+V +G+ L+ + G +V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 413 SDIHSVLLLGLCRKNHSVEAAKLARFMLKK-RIWLQGPYVDKIVEHLK---KSGDEELI 467
+ ++ ++ GLC K EA L + M + + G Y I HL+ K+ ELI
Sbjct: 542 T--YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 5/312 (1%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
V + ++ C R++ +A+ ++ +M E RPDTI + +I A L+
Sbjct: 156 VTLSSLLNGYCHGKRIS-DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
M P+++TY ++ G C G + A L M+ A++V ++ ++D +C+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
++ AL L EME +G PNVVTY+S+I C G +A +L M PN VT
Sbjct: 275 HVDDALNLFKEMETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
+ LI F EG EA +L D ++ Y+SLV RL +A+++F M+
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 369 ASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNH 428
+ PD + + +I+ C +V +G L+ ++ G + D+ ++ L+ GL
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGD 450
Query: 429 SVEAAKLARFML 440
A K+ + M+
Sbjct: 451 CDNAQKVFKQMV 462
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 166/362 (45%), Gaps = 22/362 (6%)
Query: 111 SIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNN 169
++I + E + V + ++ N C +++++ A+ +L KM + P + ++
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS-LALALLGKMMKLGYEPSIVTLSS 160
Query: 170 VIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHG 229
++ +C + A L+ M + PD IT+ ++I G + +A L M + G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 230 CAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKE 289
C NLV Y +++G+C+ G + AL LL +M E +VV + ++I C + +
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKM--EAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 290 ALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVV 349
AL + ME G PN VT S+LI C G +A QL+ ++ + +++L+
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 350 ELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEK----I 405
V+ + EAEKL+ M+ + PD + ++ GFC+++ ++K
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV----------NGFCMHDRLDKAKQMF 388
Query: 406 GFLSSVD--SDI--HSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKS 461
F+ S D D+ ++ L+ G C+ + +L R M + + +++ L
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 462 GD 463
GD
Sbjct: 449 GD 450
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 162 PDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGL 221
P + +N ++ + L + M +++ + TY +I FC ++ A L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 222 FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIF 281
M + G ++V S+LL+G C + A+ L+ +M + G P+ +T+T++I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGL 200
Query: 282 CGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSG 341
EA+ ++DRM GC PN VT ++ G C G+ D A L++K+ A +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 342 GCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYED 401
+++++ L + + + +A LF +M G++P+ + S +I LC G+ + L D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 402 -IEKIGFLSSVDSDI--HSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
IEK ++ ++ + L+ ++ VEA KL M+K+ I
Sbjct: 321 MIEK-----KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 39/278 (14%)
Query: 202 YVSMIKGFCNAGRLEDACGLF-----------------------------------KVMK 226
Y +++ + +L+DA GLF + M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 227 RHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGM 286
R L Y+ L++ CR + AL LLG+M K G + P++VT +S++ +C
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYE--PSIVTLSSLLNGYCHGKR 170
Query: 287 MKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSS 346
+ +A+ ++D+M +G P+ +T +TLI G + EA L+D++V G + Y
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 347 LVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIG 406
+V L + A L +KM A+ ++ D + + +I LC V + L++++E G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 407 FLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+V + +S L+ LC +A++L M++K+I
Sbjct: 291 IRPNVVT--YSSLISCLCSYGRWSDASQLLSDMIEKKI 326
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 170/339 (50%), Gaps = 21/339 (6%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADEL---MKGMGLIDLYPDIITYV 203
+A+ +LR+M L PD YN VIR FCE ++ A EL MKG G ++T+
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG---CSWSLVTWG 216
Query: 204 SMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKE 263
+I FC AG++++A G K MK G A+LV Y++L+ G C G ++R L E+ +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 264 GGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLD 323
G SP +TY ++I+ FC G +KEA I + M G PN T + LI G C G
Sbjct: 277 GD--SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 324 EAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMI 383
EA QL++ ++ + Y+ ++ +L + + +A ++ M +PD + ++++
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 384 RELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK- 442
LC G + E L + K + D ++ L+ GLC++N +A + +++K
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 443 ----RI--------WLQGPYVDKIVEHLKKSGDEELITN 469
R+ L+ V+K +E K+ D +++ N
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 18/320 (5%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRL 173
+++ K GC S+ ++ + KA +EAM L++M L D ++Y ++IR
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 174 FCEKGDMIAADELMKGMGLIDLY------PDIITYVSMIKGFCNAGRLEDACGLFKVMKR 227
FC+ G EL +G L D P ITY ++I+GFC G+L++A +F+ M
Sbjct: 257 FCDCG------ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 228 HGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMM 287
G N+ Y+ L+DG+C +G + AL+LL M ++ D PN VTY +I C G++
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK--DEEPNAVTYNIIINKLCKDGLV 368
Query: 288 KEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGC--YS 345
+A+ I++ M+ P+ +T + L+ G C +G+LDEA +L+ ++ S + Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 346 SLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKI 405
+L+ L + RL +A ++ ++ D + ++++ G V + L++ I
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 406 GFLSSVDSDIHSVLLLGLCR 425
+ +SD ++ ++ G C+
Sbjct: 489 KIVR--NSDTYTAMIDGFCK 506
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 147/278 (52%), Gaps = 6/278 (2%)
Query: 166 IYNNVIRL--FCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFK 223
+YN+ I L C + A L++ M L PD+ +Y ++I+GFC LE A L
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 224 VMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCG 283
MK GC+ +LV + L+D C+ G M+ A+ L EM+ G ++V YTS+I+ FC
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG--LEADLVVYTSLIRGFCD 259
Query: 284 KGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGC 343
G + + D + G +P +T +TLI+GFC G L EA ++ + ++ G +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 344 YSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIE 403
Y+ L+ L + KEA +L + M+ +P+ + +++I +LC G V + + E ++
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 404 KIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLK 441
K + D+ +++LL GLC K EA+KL MLK
Sbjct: 380 KRR--TRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
++ + ++KG C A L + M+R+ ++ +Y+ ++ G C +E+ALEL
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
EM+ G CS ++VT+ +I FC G M EA+G L M+ +G + V ++LI+GFC
Sbjct: 201 NEMK--GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G LD L D+V+ G Y++L+ + +LKEA ++F M+ GV+P+
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 378 ACSVMIRELCLGGQVLEGFCLYE-DIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ +I LC G+ E L IEK ++V +++++ LC+ +A ++
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV---TYNIIINKLCKDGLVADAVEIV 375
Query: 437 RFMLKKR 443
M K+R
Sbjct: 376 ELMKKRR 382
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 162/359 (45%), Gaps = 15/359 (4%)
Query: 58 DSTCVI--EVLHRCFPSQSQMG-----IRFFIWAALQSSYRHSSFMYNRACEMSRIKQNP 110
DS C I L R F Q+ F I ++ + + + + C + + K+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 111 SIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNV 170
++ ++E +E V +I N K L +A+ ++ M + RPD I YN +
Sbjct: 338 QLLNLMIEKDEEPNAVT----YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 171 IRLFCEKGDMIAADELMKGMGLIDLY--PDIITYVSMIKGFCNAGRLEDACGLFKVMKRH 228
+ C KGD+ A +L+ M Y PD+I+Y ++I G C RL A ++ ++
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 229 GCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMK 288
A + V + LL+ + G + +A+EL ++ N TYT++I FC GM+
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD--SKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 289 EALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLV 348
A G+L +M P+ + L+ C EG+LD+A++L +++ + ++ ++
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 349 VELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGF 407
++ +K AE L M +G+ PD S +I G + E ++ + GF
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 180/378 (47%), Gaps = 23/378 (6%)
Query: 101 CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDL 160
C+ + + ++ +V+E + C ++ + I C+ +L EA + M E +
Sbjct: 258 CDCGELDRGKALFDEVLER-GDSPCAITYNTL--IRGFCKLGQL-KEASEIFEFMIERGV 313
Query: 161 RPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACG 220
RP+ Y +I C G A +L+ M D P+ +TY +I C G + DA
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 221 LFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQI 280
+ ++MK+ + + Y+ LL G+C G ++ A +LL M K+ P+V++Y ++I
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 281 FCGKGMMKEALGILDRM-EALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVS 339
C + + +AL I D + E LG A +RVT + L+ G++++A +L ++ V
Sbjct: 434 LCKENRLHQALDIYDLLVEKLG-AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 340 SGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLY 399
+ Y++++ +T L A+ L KM S ++P + ++ LC G + + + L+
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 400 EDIEK-------IGFLSSVD-----SDIHSV--LLLGLCRKNHSVEAAKLARFMLKKRIW 445
E++++ + F +D DI S LL+G+ R S + ++ + + +
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR---F 609
Query: 446 LQGPYVDKIVEHLKKSGD 463
L+ Y+D+ + K D
Sbjct: 610 LKLGYLDEAISFFDKMVD 627
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 141 KARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDII 200
K + N A +L KM +L+P YN ++ C++G + A L + M + +PD++
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 201 TYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM 260
++ MI G AG ++ A L M R G + +L YS L++ +LG ++ A+ +M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 261 EKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC-VE 319
G + P+ SV++ +G + ++ ++ ++ T++ C
Sbjct: 626 VDSGFE--PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Query: 320 GNLDEAYQLI 329
N+D A +L+
Sbjct: 684 ANMDLAKRLL 693
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 107/229 (46%), Gaps = 4/229 (1%)
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
E A ++ M N V+ S LL+ ++ A +L M K G + NV +
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG--FAFNVYNHN 146
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
+++ C +A+ +L M P+ + +T+I+GFC L++A +L +++
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
G S + L+ + ++ EA +M G++ D + + +IR C G++ G
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 396 FCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
L++++ + G S + ++ L+ G C+ EA+++ FM+++ +
Sbjct: 267 KALFDEVLERG--DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 164/388 (42%), Gaps = 70/388 (18%)
Query: 123 EGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIA 182
+G S+ + + +A L +A+ + +M E++++P+ + YN +I +CE+GDM
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 183 ADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLD 242
A E +K M + PD +Y +I G C G+ +A + + C N + Y+ LL
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 243 GICRLGSMERALELLGEMEKEGGDCS---------------------------------P 269
G CR G +E AL + EM + G D P
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 270 NVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLI 329
+ V YTS+I G KEA GI D M GC PN VT + +I G C G ++EA L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 330 DKVVAGGSVSSG---GC--------------------------------YSSLVVELVRT 354
K+ SV + GC Y+ L+ R
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 355 KRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSD 414
R++EA +L ++M+ GV PD + + MI ELC V + L+ + + G D
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP--DRV 858
Query: 415 IHSVLLLGLCRKNHSVEAAKLARFMLKK 442
++ L+ G C +A +L ML++
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 152/315 (48%), Gaps = 8/315 (2%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA+ +++++ +F + P+ +YN +I C+ A+ L MG I L P+ +TY +I
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
FC G+L+ A M G ++ Y++L++G C+ G + A + EM +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK--K 467
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
P VVTYTS++ +C KG + +AL + M G AP+ T +TL+ G G + +A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
+L +++ + Y+ ++ + +A + +M G+ PD + +I L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWL 446
CL GQ E + + K ++ ++ LL G CR+ EA + + M+++ + L
Sbjct: 588 CLTGQASEAKVFVDGLHKGN--CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 447 Q----GPYVDKIVEH 457
G +D ++H
Sbjct: 646 DLVCYGVLIDGSLKH 660
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
C + +L + A+ L +M + L+ YN++I C+ GD+ AA+ M M L P
Sbjct: 412 FCRRGKL-DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
++TY S++ G+C+ G++ A L+ M G A ++ ++ LL G+ R G + A++L
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
EM + + PN VTY +I+ +C +G M +A L M G P+ + LI G C
Sbjct: 531 NEMAE--WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
+ G EA +D + G + CY+ L+ R +L+EA + +M+ GV D +
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 378 ACSVMI 383
V+I
Sbjct: 649 CYGVLI 654
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 154/368 (41%), Gaps = 35/368 (9%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
V+ + + + K R AM + M +RPD IY VIR CE D+ A E++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
M +I+ Y +I G C ++ +A G+ K + ++V Y L+ G+C++
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 249 SMERALELLGEM-------------------EKEGG--------------DCSPNVVTYT 275
E LE++ EM K G SPN+ Y
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
++I C EA + DRM +G PN VT S LI FC G LD A + ++V
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
G S Y+SL+ + + AE ++M+ ++P + + ++ C G++ +
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 396 FCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIV 455
LY ++ G S+ + + LL GL R +A KL M + + + ++
Sbjct: 492 LRLYHEMTGKGIAPSIYT--FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 456 EHLKKSGD 463
E + GD
Sbjct: 550 EGYCEEGD 557
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 173/388 (44%), Gaps = 22/388 (5%)
Query: 75 QMGIRFFIWAALQSSYRHSSFMY-----------------NRACEMSRIKQNPSIIIDVV 117
++G+RFF + L + HS+ + + + PS + +V+
Sbjct: 85 KLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVL 144
Query: 118 EAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKM-PEFDLRPDTIIYNNVIRLFCE 176
+ E+ + S ++ ++R + + V + M + L P+ + ++ +
Sbjct: 145 FSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 177 KGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVA 236
A EL M + + PD+ Y +I+ C L A + M+ GC N+V
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 237 YSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDR 296
Y+ L+DG+C+ + A+ + ++ G D P+VVTY +++ C + L ++D
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLA--GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 297 MEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKR 356
M L +P+ +S+L++G G ++EA L+ +VV G + Y++L+ L + ++
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 357 LKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIH 416
EAE LF +M G++P+ + S++I C G++ ++ G SV +
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP--Y 440
Query: 417 SVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+ L+ G C+ A M+ K++
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKL 468
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 43/228 (18%)
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD---ELMKGMGLIDLYPDIITYVSMIK 207
+L++M + L+PD +IY ++I + GD A +LM G + P+ +TY ++I
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV---PNEVTYTAVIN 725
Query: 208 GFCNAGRLEDA------------------CGLF------------KVMKRH-----GCAA 232
G C AG + +A G F K ++ H G A
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
N Y+ L+ G CR G +E A EL+ M +G SP+ +TYT++I C + +K+A+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDG--VSPDCITYTTMINELCRRNDVKKAIE 843
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSS 340
+ + M G P+RV +TLI G CV G + +A +L ++++ G + +
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 123 EGCVVS-VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCE-KGDM 180
EGCV + V VI LC KA NEA + KM P+ + Y + + + + DM
Sbjct: 711 EGCVPNEVTYTAVINGLC-KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 181 IAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSAL 240
A EL + L L + TY +I+GFC GR+E+A L M G + + + Y+ +
Sbjct: 770 QKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 241 LDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAL 300
++ +CR +++A+EL M ++G P+ V Y ++I C G M +A + + M
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKG--IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 301 GCAPNRVTIST 311
G PN T T
Sbjct: 887 GLIPNNKTSRT 897
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 304 PNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKL 363
P T+S L+ G + A +L + +V+ G Y+ ++ L K L A+++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 364 FSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGL 423
+ M A+G + + +V+I LC +V E + +D+ G D + L+ GL
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA--GKDLKPDVVTYCTLVYGL 307
Query: 424 CRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEELITNLPK 472
C+ ++ ML R V +VE L+K G E NL K
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 158/324 (48%), Gaps = 10/324 (3%)
Query: 124 GCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAA 183
G V V + V+F C K L ++ +L +M ++P+ IY I C M A
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 184 D---ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSAL 240
+ ELMK G++ P++ TY +MI G+C G + A GL+K + N+V + L
Sbjct: 254 EKMFELMKKHGVL---PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 241 LDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAL 300
+DG C+ + A L M K G D PN+ Y +I C G M EA+G+L ME+L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVD--PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 301 GCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEA 360
+P+ T + LI G C+E + EA +L K+ S Y+SL+ + +++A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 361 EKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLL 420
L S+M ASGV+P+ + S +I C + LY ++ G + V + ++ L+
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT--YTALI 486
Query: 421 LGLCRKNHSVEAAKLARFMLKKRI 444
++ + EA +L ML+ I
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGI 510
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 169/377 (44%), Gaps = 57/377 (15%)
Query: 135 IFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLID 194
I +LC ++ EA + M + + P+ Y+ +I +C+ G++ A L K + + +
Sbjct: 241 ILDLCRDNKM-EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE 299
Query: 195 LYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERAL 254
L P+++ + +++ GFC A L A LF M + G NL Y+ L+ G C+ G+M A+
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 255 ELLGEMEKEGGDCSPNVVTYT-----------------------------------SVIQ 279
LL EME + SP+V TYT S+I
Sbjct: 360 GLLSEME--SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 280 IFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVS 339
+C + M++AL + M A G PN +T STLI G+C ++ A L ++ G V
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 340 SGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLY 399
Y++L+ + +KEA +L+S ML +G+ P+ + ++ G++ Y
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 400 EDIEK-------IGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVD 452
++ + +GF + L+ GLC+ + + A +RF R P +
Sbjct: 538 QENNQQRSCWNHVGF---------TCLIEGLCQNGYILRA---SRFFSDMRSCGITPDIC 585
Query: 453 KIVEHLKKSGDEELITN 469
V LK E+ IT+
Sbjct: 586 SYVSMLKGHLQEKRITD 602
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
++ +I F G+ +EAL + M+ C+P+ +++ G D + ++
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
+ G V Y L + + EKL +M + G+KP+ ++ I +LC ++
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 394 EGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFML 440
E ++E ++K G L ++ + +S ++ G C+ + +A L + +L
Sbjct: 252 EAEKMFELMKKHGVLPNLYT--YSAMIDGYCKTGNVRQAYGLYKEIL 296
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 170 VIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHG 229
+I C+ G ++ A M + PDI +YVSM+KG R+ D L M + G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Query: 230 CAANLV 235
NL+
Sbjct: 615 ILPNLL 620
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 198/409 (48%), Gaps = 40/409 (9%)
Query: 77 GIRFFIWAALQS-SYRHSSFMY-----NRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVK 130
G+RFF W + + S++ SF RA ++ + +N I+ + GCV K
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLN-VARNFLFSIE----RRSNGCV---K 135
Query: 131 MMKVIFNLCEK----ARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAA--- 183
+ FN + A L E++ + + M + + P + +N+++ + ++G A
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 184 -DELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLD 242
DE+ + G+ PD T+ ++I GFC +++A +FK M+ + C ++V Y+ ++D
Sbjct: 196 FDEMRRTYGVT---PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252
Query: 243 GICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGC 302
G+CR G ++ A +L M K+ D PNVV+YT++++ +C K + EA+ + M + G
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312
Query: 303 APNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGG-----SVSSGGC-YSSLVVELVRTKR 356
PN VT +TLIKG DE I ++ GG + + C ++ L+
Sbjct: 313 KPNAVTYNTLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGH 368
Query: 357 LKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD---- 412
L A K+F +ML + PD + SV+IR LC+ + L+ ++ + L D
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKP 428
Query: 413 -SDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKK 460
+ ++ + LC + +A K+ R ++K+ + Y I H ++
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCRE 477
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 8/260 (3%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKG--MGLIDLYPDIITYV 203
+EA+ V M L+P+ + YN +I+ E +++ G PD T+
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 204 SMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM-EK 262
+IK C+AG L+ A +F+ M + +YS L+ +C +RA L E+ EK
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 263 E---GGD-CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCV 318
E G D C P Y + + C G K+A + ++ G + + TLI G C
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCR 476
Query: 319 EGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA 378
EG AY+L+ ++ V Y L+ L++ A +ML S P
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 379 CSVMIRELCLGGQVLEGFCL 398
++ EL E FCL
Sbjct: 537 FHSVLAELAKRKFANESFCL 556
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 99/246 (40%), Gaps = 6/246 (2%)
Query: 161 RPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACG 220
+P YN + C G A+++ + + + D +Y ++I G C G+ + A
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQL-MKRGVQDPPSYKTLITGHCREGKFKPAYE 485
Query: 221 LFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQI 280
L +M R +L Y L+DG+ ++G A + L M + P T+ SV+
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR--SSYLPVATTFHSVLAE 543
Query: 281 FCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSS 340
+ E+ ++ M N + +++ ++A+ ++ + G +
Sbjct: 544 LAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVK 603
Query: 341 GGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYE 400
L+ L ++L +A L L D C+ +I LC + E F LY
Sbjct: 604 ---MEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYN 660
Query: 401 DIEKIG 406
++ ++G
Sbjct: 661 ELVELG 666
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 167/335 (49%), Gaps = 16/335 (4%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F++N+A E + +V+ + GC ++ V+ N LC++ + + A
Sbjct: 123 HGLFLHNKASEA----------VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI-DLAFN 171
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L KM + D +I+N +I C+ + A L K M + P+++TY S+I C
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
+ GR DA L M NLV ++AL+D + G A +L +M K D P+
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID--PD 289
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+ TY S+I FC + +A + + M + C P+ T +TLIKGFC +++ +L
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G V Y++L+ L A+K+F +M++ GV PD + S+++ LC G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCR 425
++ + +++ ++K +D I++ ++ G+C+
Sbjct: 410 KLEKALEVFDYMQKSEI--KLDIYIYTTMIEGMCK 442
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 181/364 (49%), Gaps = 21/364 (5%)
Query: 113 IIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
+++ +EA K E VV +I +LC K R ++A+ + ++M +RP+ + Y+++I
Sbjct: 172 LLNKMEAAKIEADVVIFN--TIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
C G A +L+ M + P+++T+ ++I F G+ +A L M +
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
++ Y++L++G C +++A ++ M + DC P++ TY ++I+ FC +++
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSK--DCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+ M G + VT +TLI+G +G+ D A ++ ++V+ G YS L+ L
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVD 412
+L++A ++F M S +K D + MI +C G+V +G+ L+ + G +V
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 413 SDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDK------IVEHLK---KSGD 463
+ ++ ++ GLC K EA + L K++ GP D I HL+ K+
Sbjct: 467 T--YNTMISGLCSKRLLQEA-----YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 464 EELI 467
ELI
Sbjct: 520 AELI 523
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 173/372 (46%), Gaps = 46/372 (12%)
Query: 129 VKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR-LF------------- 174
V + ++ C R++ +A+ ++ +M E RPDTI + +I LF
Sbjct: 81 VTLSSLLNGYCHGKRIS-DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 175 ---------------------CEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAG 213
C++GD+ A L+ M + D++ + ++I C
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM-EKEGGDCSPNVV 272
++DA LFK M+ G N+V YS+L+ +C G A +LL +M EK+ +PN+V
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPNLV 256
Query: 273 TYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKV 332
T+ ++I F +G EA + D M P+ T ++LI GFC+ LD+A Q+ + +
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 333 VAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQV 392
V+ Y++L+ ++KR+++ +LF +M G+ D + + +I+ L G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 393 LEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPY 450
+++ + G V DI +S+LL GLC +A ++ +M K I L
Sbjct: 377 DNAQKVFKQMVSDG----VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 451 VDKIVEHLKKSG 462
++E + K+G
Sbjct: 433 YTTMIEGMCKAG 444
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 22/380 (5%)
Query: 93 SSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWV 151
S F +N+ + ++I + E + G ++ ++ N C +++++ A+ +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS-LALAL 67
Query: 152 LRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCN 211
L KM + P + ++++ +C + A L+ M + PD IT+ ++I G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 212 AGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNV 271
+ +A L M + GC NLV Y +++G+C+ G ++ A LL +M E +V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM--EAAKIEADV 185
Query: 272 VTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDK 331
V + ++I C + +AL + ME G PN VT S+LI C G +A QL+
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 332 VVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQ 391
++ + +++L+ V+ + EAEKL M+ + PD + +I
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI-------- 297
Query: 392 VLEGFCLYEDIEK----IGFLSSVDS----DIHSVLLLGLCRKNHSVEAAKLARFMLKKR 443
GFC+++ ++K F+ S D D ++ L+ G C+ + +L R M +
Sbjct: 298 --NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 444 IWLQGPYVDKIVEHLKKSGD 463
+ +++ L GD
Sbjct: 356 LVGDTVTYTTLIQGLFHDGD 375
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 4/248 (1%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P I + ++ + + L + M+R G + NL Y+ L++ CR + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
LG+M K G + P++VT +S++ +C + +A+ ++D+M +G P+ +T +TLI G
Sbjct: 68 LGKMMKLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
+ EA L+D++V G + Y +V L + + A L +KM A+ ++ D
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ + +I LC V + L++++E G +V + +S L+ LC +A++L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT--YSSLISCLCSYGRWSDASQLL 243
Query: 437 RFMLKKRI 444
M++K+I
Sbjct: 244 SDMIEKKI 251
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 146 NEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSM 205
+ A V ++M + PD + Y+ ++ C G + A E+ M ++ DI Y +M
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
I+G C AG+++D LF + G N+V Y+ ++ G+C ++ A LL +M+++G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
P+ TY ++I+ G + ++ M + + TI L+ +G LD++
Sbjct: 497 --LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 553
Query: 326 Y 326
+
Sbjct: 554 F 554
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 227/506 (44%), Gaps = 54/506 (10%)
Query: 2 PRFSLSRILSSSVNIKNSKIFALHFTTASPAE----------------RFYTHLQKNPNN 45
PR+ ++ +++ + ++ +H T +P E R+Y+ L KN
Sbjct: 39 PRYDVA-VIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKN--- 94
Query: 46 IEKTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSR 105
+ + L+ T ++LH ++ IR F+ +++ H A M
Sbjct: 95 -----SDISVSLELT--FKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCD 147
Query: 106 IKQNPSIIIDVV--------------EAYKEEGC----VVSVKMMKVIFNLCEKARLANE 147
SII D++ EA+K G + ++ ++ L ++ R A +
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSA-D 206
Query: 148 AMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIK 207
+V ++M ++P+ +N VI C+ G M A ++M+ M + P++++Y ++I
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 208 GFCN---AGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEG 264
G+C G++ A + K M + + NL ++ L+DG + ++ ++++ EM +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ- 325
Query: 265 GDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDE 324
D PNV++Y S+I C G + EA+ + D+M + G PN +T + LI GFC L E
Sbjct: 326 -DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 325 AYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIR 384
A + V G+V + Y+ L+ + ++ + L +M G+ PD + +I
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 385 ELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
LC G + L++ + G V +L+ G CRK S +AA L + M K +
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGLPDLV---TFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 445 WLQGPYVDKIVEHLKKSGDEELITNL 470
+ + +++ K G+ + TN+
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNM 527
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 11/333 (3%)
Query: 115 DVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW----VLRKMPEFDLRPDTIIYNN 169
DV+E K GC +V + + C+ N M+ VL++M E D+ P+ +N
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLG--GNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 170 VIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHG 229
+I F + ++ + ++ K M D+ P++I+Y S+I G CN G++ +A + M G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 230 CAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKE 289
NL+ Y+AL++G C+ ++ AL++ G ++ +G P Y +I +C G + +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA--VPTTRMYNMLIDAYCKLGKIDD 419
Query: 290 ALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVV 349
+ + ME G P+ T + LI G C GN++ A +L D++ + G + + L+
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILME 478
Query: 350 ELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLS 409
R ++A L +M G+KP L +++++ C G + + +EK L
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL- 537
Query: 410 SVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
++ ++VLL G +K +A L ML+K
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 82 IWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEK 141
+ A +Q + + + N C+ +K+ +D+ + K +G V + +M ++ + K
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKE----ALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 142 ARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIIT 201
++ + +M + PD YN +I C G++ AA +L + L PD++T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Query: 202 YVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEME 261
+ +++G+C G A L K M + G + Y+ ++ G C+ G+++ A + +ME
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 262 KEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
KE NV +Y ++Q + KG +++A +L+ M G PNR+T
Sbjct: 533 KE-RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 139 CEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGM-GLIDLYP 197
C K AM +L++M + L+P + YN V++ +C++G++ AA + M L
Sbjct: 481 CRKGESRKAAM-LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAY 237
++ +Y +++G+ G+LEDA L M G N + Y
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 176/355 (49%), Gaps = 41/355 (11%)
Query: 126 VVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADE 185
V+ V ++ C +A ++ +L ++ EF P+ +IY +I C+KG++ A +
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 186 LMKGMGLIDL-----------------------------------YPDIITYVSMIKGFC 210
L MG + L +P++ TY ++ C
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
GR +DA +F M+ G + N+V Y+ L+ G+CR + A +++ +M+ +G +PN
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG--INPN 337
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
++TY ++I FCG G + +AL + +++ G +P+ VT + L+ GFC +G+ A +++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
++ G S Y+ L+ R+ +++A +L M G+ PD SV+I C+ G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 391 QVLEGFCLYED-IEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
Q+ E L++ +EK + V I++ ++LG C++ S A KL + M +K +
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEV---IYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 8/288 (2%)
Query: 98 NRACEMSRIKQNPSIIIDVVEAYKEEGCVVS-VKMMKVIFNLCEKARLANEAMWVLRKMP 156
N+ C+ R K V + +E G + V +I LC + +L NEA V+ +M
Sbjct: 276 NQLCKDGRTKD----AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL-NEANKVVDQMK 330
Query: 157 EFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLE 216
+ P+ I YN +I FC G + A L + + L P ++TY ++ GFC G
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 217 DACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTS 276
A + K M+ G + V Y+ L+D R +ME+A++L ME+ G P+V TY+
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG--LVPDVHTYSV 448
Query: 277 VIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGG 336
+I FC KG M EA + M C PN V +T+I G+C EG+ A +L+ ++
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 337 SVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIR 384
+ Y ++ L + ++ KEAE+L KM+ SG+ P S++ R
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 140/275 (50%), Gaps = 4/275 (1%)
Query: 114 IDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR 172
++ E +E+G ++ + N LC+ R +A V +M E + + + YN +I
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR-TKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 173 LFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAA 232
C + + A++++ M + P++ITY ++I GFC G+L A L + +K G +
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 233 NLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALG 292
+LV Y+ L+ G CR G A +++ EME+ G P+ VTYT +I F M++A+
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERG--IKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 293 ILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELV 352
+ ME LG P+ T S LI GFC++G ++EA +L +V + Y+++++
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 353 RTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELC 387
+ A KL +M + P+ + MI LC
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 4/321 (1%)
Query: 124 GCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAA 183
G V + + V+ N K + + + KM E + P+ YN V+ C+ G A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 184 DELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDG 243
++ M + +I+TY ++I G C +L +A + MK G NL+ Y+ L+DG
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 244 ICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCA 303
C +G + +AL L +++ G SP++VTY ++ FC KG A ++ ME G
Sbjct: 348 FCGVGKLGKALSLCRDLKSRG--LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 304 PNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKL 363
P++VT + LI F N+++A QL + G V YS L+ ++ EA +L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 364 FSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGL 423
F M+ +P+ + + MI C G L +++E+ +V S + ++ L
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS--YRYMIEVL 523
Query: 424 CRKNHSVEAAKLARFMLKKRI 444
C++ S EA +L M+ I
Sbjct: 524 CKERKSKEAERLVEKMIDSGI 544
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 312 LIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASG 371
+I + +L+ + +++V G V C++ L+ +V + + F++ S
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSK 158
Query: 372 VKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVE 431
V D + ++I+ C G++ + F L ++ + GF S + I++ L+ G C+K +E
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF--SPNVVIYTTLIDGCCKKGE-IE 215
Query: 432 AAKLARFMLKK 442
AK F + K
Sbjct: 216 KAKDLFFEMGK 226
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 112 IIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNV 170
+ ++V+ + +GC +V ++ + C+ ++ +EA VL +M L+P+T+ +N +
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI-DEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 171 IRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGC 230
I FC++ + A E+ + M PD+ T+ S+I G C ++ A L + M G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 231 AANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSP-NVVTYTSVIQIFCGKGMMKE 289
AN V Y+ L++ R G ++ A +L+ EM +G SP + +TY S+I+ C G + +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG---SPLDEITYNSLIKGLCRAGEVDK 582
Query: 290 ALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVV 349
A + ++M G AP+ ++ + LI G C G ++EA + ++V GS ++SL+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 350 ELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLS 409
L R R+++ +F K+ A G+ PD + + ++ LC GG V + L ++ + GF+
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 410 S 410
+
Sbjct: 703 N 703
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 11/298 (3%)
Query: 134 VIFN-----LCEKARLANEAMWVLRKM-PEFDLRPDTIIYNNVIRLFCEKGDMIAADELM 187
VIFN RL ++A VL M + + PD YN++I + ++G + A E++
Sbjct: 354 VIFNTLIHGFVTHGRL-DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 188 KGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRL 247
M P++ +Y ++ GFC G++++A + M G N V ++ L+ C+
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 248 GSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRV 307
+ A+E+ EM ++G C P+V T+ S+I C +K AL +L M + G N V
Sbjct: 473 HRIPEAVEIFREMPRKG--CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 308 TISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKM 367
T +TLI F G + EA +L++++V GS Y+SL+ L R + +A LF KM
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 368 LASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCR 425
L G P ++C+++I LC G V E +++ G S+ D + L+ GLCR
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG--STPDIVTFNSLINGLCR 646
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 13/347 (3%)
Query: 105 RIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDT 164
R+ +++ D+V +Y G V V + K L A+ VL M +P+
Sbjct: 368 RLDDAKAVLSDMVTSY---GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 165 IIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKV 224
Y ++ FC+ G + A ++ M L P+ + + +I FC R+ +A +F+
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 225 MKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGK 284
M R GC ++ +++L+ G+C + ++ AL LL +M EG N VTY ++I F +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG--VVANTVTYNTLINAFLRR 542
Query: 285 GMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCY 344
G +KEA +++ M G + +T ++LIKG C G +D+A L +K++ G S
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 345 SSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEK 404
+ L+ L R+ ++EA + +M+ G PD + + +I LC G++ +G ++ ++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 405 IGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR------FMLKKRIW 445
G D+ + L+ LC+ +A L F+ R W
Sbjct: 663 EGI--PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 101 CEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDL 160
C ++ I S++ D+ + GCV + + + + + K NEA+ +L +M
Sbjct: 228 CAVNEIDSALSLLRDMTK----HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 161 RPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACG 220
PD +N+VI C+ + A +++ M + PD ITY ++ G C GR++ A
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 221 LFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQI 280
LF + + +V ++ L+ G G ++ A +L +M G P+V TY S+I
Sbjct: 344 LFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG-IVPDVCTYNSLIYG 398
Query: 281 FCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSS 340
+ +G++ AL +L M GC PN + + L+ GFC G +DEAY +++++ A G +
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 341 GGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYE 400
++ L+ + R+ EA ++F +M G KPD + +I LC ++ L
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 401 DIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIV 455
D+ G +++ + ++ L+ R+ EA KL M+ QG +D+I
Sbjct: 519 DMISEGVVANTVT--YNTLINAFLRRGEIKEARKLVNEMV-----FQGSPLDEIT 566
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 156/320 (48%), Gaps = 11/320 (3%)
Query: 124 GCVVSVKMMK-VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIA 182
GCV + VI LC+ R+ NEA ++ +M PD I Y ++ C+ G + A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRI-NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 183 ADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVM-KRHGCAANLVAYSALL 241
A +L + P+I+ + ++I GF GRL+DA + M +G ++ Y++L+
Sbjct: 341 AKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 242 DGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALG 301
G + G + ALE+L +M +G C PNV +YT ++ FC G + EA +L+ M A G
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKG--CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 302 CAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAE 361
PN V + LI FC E + EA ++ ++ G ++SL+ L +K A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 362 KLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLL 421
L M++ GV + + + +I G++ E L ++ G S +D ++ L+
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG--SPLDEITYNSLIK 572
Query: 422 GLCRKNHSVEAAKLARFMLK 441
GLCR +A L ML+
Sbjct: 573 GLCRAGEVDKARSLFEKMLR 592
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 136/249 (54%), Gaps = 7/249 (2%)
Query: 113 IIDVVEAYKE---EGCVVSVKMMK-VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYN 168
I + VE ++E +GC V +I LCE + + A+W+LR M + +T+ YN
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH-ALWLLRDMISEGVVANTVTYN 533
Query: 169 NVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRH 228
+I F +G++ A +L+ M D ITY S+IKG C AG ++ A LF+ M R
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 229 GCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMK 288
G A + ++ + L++G+CR G +E A+E EM G +P++VT+ S+I C G ++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS--TPDIVTFNSLINGLCRAGRIE 651
Query: 289 EALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLV 348
+ L + +++A G P+ VT +TL+ C G + +A L+D+ + G V + +S L+
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Query: 349 VELVRTKRL 357
++ + L
Sbjct: 712 QSIIPQETL 720
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 10/358 (2%)
Query: 70 FPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSV 129
P + F W Q+ YRHS +Y I ++ K+EG V
Sbjct: 87 LPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKE 146
Query: 130 KMMKVIFNLCEKARLANEAMWVLRKMPE-FDLRPDTIIYNNVIRLFCEKGDMIAADELMK 188
+ I +KA + ++ +M + P YN V+ + A +
Sbjct: 147 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206
Query: 189 GMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLG 248
M + P + T+ ++K FC ++ A L + M +HGC N V Y L+ + +
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 249 SMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVT 308
+ AL+LL EM G C P+ T+ VI C + EA +++RM G AP+ +T
Sbjct: 267 RVNEALQLLEEMFLMG--CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Query: 309 ISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKML 368
L+ G C G +D A L ++ V +++L+ V RL +A+ + S M+
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 369 AS-GVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCR 425
S G+ PD + +I G V + D+ G +V S +++L+ G C+
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS--YTILVDGFCK 436
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 129/253 (50%), Gaps = 3/253 (1%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I C++ R+ EA+ + R+MP +PD +N++I CE ++ A L++ M
Sbjct: 465 LISAFCKEHRIP-EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERA 253
+ + +TY ++I F G +++A L M G + + Y++L+ G+CR G +++A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 254 LELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLI 313
L +M ++G +P+ ++ +I C GM++EA+ M G P+ VT ++LI
Sbjct: 584 RSLFEKMLRDGH--APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 314 KGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVK 373
G C G +++ + K+ A G +++L+ L + + +A L + + G
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 374 PDGLACSVMIREL 386
P+ S++++ +
Sbjct: 702 PNHRTWSILLQSI 714
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 134 VIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLI 193
+I LC ++ + EA+ ++M PD + +N++I C G + + + +
Sbjct: 605 LINGLC-RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 194 DLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMER 252
+ PD +T+ +++ C G + DAC L G N +S LL I +++R
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 165/328 (50%), Gaps = 10/328 (3%)
Query: 108 QNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIY 167
++ S++++ + A C + +FN K ++ +E + M + P+ + Y
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTY 166
Query: 168 NNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKR 227
+ I FC+ G++ A + M L P+++T+ +I G+C AG LE A L+K M+R
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 228 HGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMM 287
+ N+V Y+AL+DG C+ G M+RA E+ M ++ PN + YT++I F +G
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED--RVEPNSLVYTTIIDGFFQRGDS 284
Query: 288 KEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSL 347
A+ L +M G + +I G C G L EA ++++ + V ++++
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 348 VVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGF 407
+ ++ R+K A ++ K++ G +PD +A S MI + GQ+ E +Y IEK
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEK--- 400
Query: 408 LSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ +++VL+ LC++ +E +L
Sbjct: 401 ---ANDVMYTVLIDALCKEGDFIEVERL 425
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 28/320 (8%)
Query: 96 MYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKM 155
MY+R E R++ N + +++ + + G ++ AM L KM
Sbjct: 255 MYSRMVE-DRVEPNSLVYTTIIDGFFQRGD-------------------SDNAMKFLAKM 294
Query: 156 PEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRL 215
+R D Y +I C G + A E+++ M DL PD++ + +M+ + +GR+
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 216 EDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYT 275
+ A ++ + G ++VA S ++DGI + G + A+ +EK N V YT
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-IEK------ANDVMYT 407
Query: 276 SVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAG 335
+I C +G E + ++ G P++ ++ I G C +GNL +A++L ++V
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 336 GSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEG 395
G + Y++L+ L + EA ++F +ML SG+ PD ++IR G +
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 396 FCLYEDIEKIGFLSSV-DSD 414
L D+++ G +++V D+D
Sbjct: 528 SDLLLDMQRRGLVTAVSDAD 547
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 43/339 (12%)
Query: 144 LANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYV 203
+ EA+ L ++ + PD N I I + + + + P ++
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 204 SMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKE 263
S++ C G+++ A + M R GC ++++Y++L+DG CR G + A +L +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 264 GGD-----------------------------------CSPNVVTYTSVIQIFCGKGMMK 288
G CSPNVVTY++ I FC G ++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 289 EALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA---YQLIDKVVAGGSVSSGGCYS 345
AL M+ +PN VT + LI G+C G+L+ A Y+ + +V +V + Y+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT---YT 237
Query: 346 SLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKI 405
+L+ + ++ AE+++S+M+ V+P+ L + +I G +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 406 GFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
G +D + V++ GLC EA ++ M K +
Sbjct: 298 GM--RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 39/235 (16%)
Query: 268 SPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA-- 325
+P+ ++ SV+ C G +K A I+ M GC P+ ++ ++LI G C G++ A
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 326 -----------------------------YQLIDKVVAGGSVSSGGC------YSSLVVE 350
+++D+V V C YS+ +
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDT 172
Query: 351 LVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSS 410
++ L+ A K F M + P+ + + +I C G + LY+++ ++ S
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM--S 230
Query: 411 VDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEE 465
++ ++ L+ G C+K A ++ M++ R+ I++ + GD +
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 175/369 (47%), Gaps = 17/369 (4%)
Query: 116 VVEAYKEEGCVVSVKMMKVIF-NLCEKARLANEAMWVLRKMPEFDLR-----PDTIIYNN 169
V+ E GC+ +V ++ LC++ R + EA+ +L M D R PD + Y
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENR-SQEALELLHMMA--DDRGGGSPPDVVSYTT 201
Query: 170 VIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHG 229
VI F ++GD A M + PD++TY S+I C A ++ A + M ++G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 230 CAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKE 289
+ + Y+++L G C G + A+ L +M +G P+VVTY+ ++ C G E
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG--VEPDVVTYSLLMDYLCKNGRCME 319
Query: 290 ALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVV 349
A I D M G P T TL++G+ +G L E + L+D +V G +S L+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 350 ELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLS 409
+ ++ +A +FSKM G+ P+ + +I LC G+V + +E + G
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL-- 437
Query: 410 SVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSG----DEE 465
S + +++ L+ GLC N A +L ML + I L + + I++ K G E+
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 466 LITNLPKIG 474
L + +IG
Sbjct: 498 LFELMVRIG 506
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 153/293 (52%), Gaps = 4/293 (1%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA+ L+KM + PD + Y+ ++ C+ G + A ++ M L P+I TY +++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
+G+ G L + GL +M R+G + +S L+ + G +++A+ + +M ++G
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-- 401
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
+PN VTY +VI I C G +++A+ ++M G +P + ++LI G C + A
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
+LI +++ G + ++S++ + R+ E+EKLF M+ GVKP+ + + +I
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFM 439
CL G++ E L + +G ++ +S L+ G C+ + +A L + M
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGL--KPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 181/390 (46%), Gaps = 41/390 (10%)
Query: 109 NPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMWVLRKMPEFDLRPDTIIY 167
P I ++ + +G V ++ + LC+ R EA + M + L+P+ Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM-EARKIFDSMTKRGLKPEITTY 339
Query: 168 NNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKR 227
+++ + KG ++ L+ M ++PD + +I + G+++ A +F M++
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 228 HGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQ-------- 279
G N V Y A++ +C+ G +E A+ +M EG SP + Y S+I
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG--LSPGNIVYNSLIHGLCTCNKW 457
Query: 280 -------------------IF--------CGKGMMKEALGILDRMEALGCAPNRVTISTL 312
IF C +G + E+ + + M +G PN +T +TL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 313 IKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGV 372
I G+C+ G +DEA +L+ +V+ G + YS+L+ + R+++A LF +M +SGV
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 373 KPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEA 432
PD + +++++ L + LY I + G + ++ ++++L GLC+ + +A
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESG--TQIELSTYNIILHGLCKNKLTDDA 635
Query: 433 AKLARFMLKKRIWLQGPYVDKIVEHLKKSG 462
++ + + + L+ + +++ L K G
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVG 665
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 4/288 (1%)
Query: 159 DLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDA 218
++ PD Y +I C G + + + D I + ++KG C R DA
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 219 CGL-FKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM-EKEGGDCSPNVVTYTS 276
+ + M GC N+ +Y+ LL G+C + ALELL M + GG P+VV+YT+
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 277 VIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGG 336
VI F +G +A M G P+ VT +++I C +D+A ++++ +V G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 337 SVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGF 396
+ Y+S++ + + KEA KM + GV+PD + S+++ LC G+ +E
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 397 CLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
+++ + K G + + + LL G K VE L M++ I
Sbjct: 322 KIFDSMTKRGLKPEITT--YGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 4/310 (1%)
Query: 163 DTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLF 222
+TI +N++I C++G +I +++L + M I + P++ITY ++I G+C AG++++A L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 223 KVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFC 282
M G N V YS L++G C++ ME AL L EME G SP+++TY ++Q
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG--VSPDIITYNIILQGLF 592
Query: 283 GKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGG 342
A + R+ G T + ++ G C D+A Q+ +
Sbjct: 593 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR 652
Query: 343 CYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDI 402
++ ++ L++ R EA+ LF ++G+ P+ +M + G + E L+ +
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712
Query: 403 EKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSG 462
E G +VDS + + ++ L ++ A + +K L+ ++ L
Sbjct: 713 EDNG--CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGK 770
Query: 463 DEELITNLPK 472
+E LP+
Sbjct: 771 YQEYYRFLPE 780
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 130/266 (48%), Gaps = 20/266 (7%)
Query: 187 MKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICR 246
M G ++ PD+ TY +I C AGRL+ + + G + +A++ LL G+C
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 247 LGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRM---EALGCA 303
A++++ E G C PNV +Y +++ C + +EAL +L M G
Sbjct: 135 DKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSP 193
Query: 304 PNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKL 363
P+ V+ +T+I GF EG+ D+AY +++ G + Y+S++ L + + + +A ++
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 364 FSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSD-------IH 416
+ M+ +GV PD + + ++ C GQ E IGFL + SD +
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA---------IGFLKKMRSDGVEPDVVTY 304
Query: 417 SVLLLGLCRKNHSVEAAKLARFMLKK 442
S+L+ LC+ +EA K+ M K+
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKR 330
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 58/132 (43%)
Query: 122 EEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMI 181
E G + + +I + K +L ++A+ + + + DL+ + +N +I + G
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 182 AADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALL 241
A +L L P+ TY M + G LE+ LF M+ +GC + + ++
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Query: 242 DGICRLGSMERA 253
+ + G + RA
Sbjct: 729 RELLQRGEITRA 740
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 150/305 (49%), Gaps = 11/305 (3%)
Query: 141 KARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDII 200
KA ANE + M E DT YN VI FC+ G + A +L++ M P ++
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 201 TYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEM 260
TY S+I G RL++A LF+ K N+V YS+L+DG ++G ++ A +L E+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 261 EKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEG 320
++G +PN+ T+ S++ + EAL M+ L C PN+VT LI G C
Sbjct: 684 MQKG--LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 321 NLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACS 380
++A+ ++ G S Y++++ L + + EA LF + A+G PD +
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 381 VMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHS---VLLLGLCRKNHSVEAAKLAR 437
MI L G + ++ F L+E+ + G IH+ V+LL KN +E A +
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGL------PIHNKTCVVLLDTLHKNDCLEQAAIVG 855
Query: 438 FMLKK 442
+L++
Sbjct: 856 AVLRE 860
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 174/388 (44%), Gaps = 11/388 (2%)
Query: 47 EKTLATVKAKLDSTCVIEVLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRI 106
E TL+ + K VI VL R I +F W ++ H YN +
Sbjct: 53 ENTLSALSFKPQPEFVIGVLRRL--KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMAR 110
Query: 107 KQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTII 166
+N + ++ G SV + C KA E V++ M +F RP
Sbjct: 111 CRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSA 170
Query: 167 YNNVIRLFC--EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKV 224
Y +I F DM+ L + M + P + + ++I+GF GR++ A L
Sbjct: 171 YTTLIGAFSAVNHSDMMLT--LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 225 MKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGK 284
MK A++V Y+ +D ++G ++ A + E+E G P+ VTYTS+I + C
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG--LKPDEVTYTSMIGVLCKA 286
Query: 285 GMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCY 344
+ EA+ + + +E P +T+I G+ G DEAY L+++ A GS+ S Y
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 345 SSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEK 404
+ ++ L + ++ EA K+F +M P+ +++I LC G++ F L + ++K
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 405 IGFLSSVDSDIHSVLLLGLCRKNHSVEA 432
G +V + ++++ LC+ EA
Sbjct: 406 AGLFPNVRT--VNIMVDRLCKSQKLDEA 431
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 161/347 (46%), Gaps = 5/347 (1%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
++E + +G + SV I K +EA+ V +M + D P+ YN +I + C
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLC 388
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
G + A EL M L+P++ T M+ C + +L++AC +F+ M C + +
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILD 295
+ +L+DG+ ++G ++ A ++ +M DC N + YTS+I+ F G ++ I
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 296 RMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTK 355
M C+P+ ++T + G ++ + +++ A V YS L+ L++
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 356 RLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI 415
E +LF M G D A +++I C G+V + + L E+++ GF +V +
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT-- 624
Query: 416 HSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSG 462
+ ++ GL + + EA L KRI L +++ K G
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
LC+ RL +EA+ + + + P T YN +I + G A L++ P
Sbjct: 283 LCKANRL-DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
+I Y ++ G++++A +F+ MK+ A NL Y+ L+D +CR G ++ A EL
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
M+K G PNV T ++ C + EA + + M+ C P+ +T +LI G
Sbjct: 401 DSMQKAG--LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G +D+AY++ +K++ ++ Y+SL+ R ++ K++ M+ PD
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 378 ACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ + + G+ +G ++E+I+ F+ D+ +S+L+ GL + + E +L
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP--DARSYSILIHGLIKAGFANETYEL 574
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 121 KEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIR-------- 172
KE+GCV+ + ++ + K N+A +L +M P + Y +VI
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 173 -----LFCEKG------DMIAADELMKGMGLID----------------LYPDIITYVSM 205
LF E +++ L+ G G + L P++ T+ S+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 206 IKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGG 265
+ A + +A F+ MK C N V Y L++G+C++ +A EM+K+G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG- 757
Query: 266 DCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEA 325
P+ ++YT++I G + EA + DR +A G P+ + +I+G +A
Sbjct: 758 -MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Query: 326 YQLIDKVVAGG 336
+ L ++ G
Sbjct: 817 FSLFEETRRRG 827
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%)
Query: 116 VVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFC 175
++E ++G ++ + + KA NEA+ + M E P+ + Y +I C
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 176 EKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLV 235
+ A + M + P I+Y +MI G AG + +A LF K +G +
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 236 AYSALLDGICRLGSMERALELLGEMEKEG 264
Y+A+++G+ A L E + G
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 151/288 (52%), Gaps = 8/288 (2%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
+A+++ +M +P+ +IYN +I C+ + A +L+ M + PD++TY S+I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
G C++GR DA + M + ++ ++AL+D + G + A E EM + D
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
P++VTY+ +I C + EA + M + GC P+ VT S LI G+C ++
Sbjct: 289 --PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
+L ++ G V + Y+ L+ R +L AE++F +M+ GV P+ + +V++ L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRKNHSVEA 432
C G++ + + D++K G +D+DI +++++ G+C+ +A
Sbjct: 407 CDNGKIEKALVILADMQKNG----MDADIVTYNIIIRGMCKAGEVADA 450
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 190/397 (47%), Gaps = 15/397 (3%)
Query: 61 CVIEVLHRCFPSQSQMGIRF-FIWAALQSSYRHSSFMY----NRACEMSRIKQNPSIIID 115
C +L CF SQ+ + F+ ++ + S + N C R+ +
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 116 VVE-AYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLF 174
+V YK + + +I LC K++ + A+ +L +M + + PD + YN++I
Sbjct: 177 MVGMGYKPNVVIYNT----IIDGLC-KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 175 CEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANL 234
C G A ++ M ++YPD+ T+ ++I GR+ +A ++ M R ++
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 235 VAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGIL 294
V YS L+ G+C ++ A E+ G M +G C P+VVTY+ +I +C ++ + +
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKG--CFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 295 DRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRT 354
M G N VT + LI+G+C G L+ A ++ ++V G + Y+ L+ L
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 355 KRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSD 414
++++A + + M +G+ D + +++IR +C G+V + + +Y + G + + +
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT- 468
Query: 415 IHSVLLLGLCRKNHSVEAAKLARFMLKKRIWLQGPYV 451
++ ++LGL +K EA L R M + I YV
Sbjct: 469 -YTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 197 PDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALEL 256
P I + ++ + + L++ M+ G NL + LL+ CR + AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 257 LGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
LG+M K G + P++VT+ S++ FC + +AL + D+M +G PN V +T+I G
Sbjct: 139 LGKMIKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C +D A L++++ G Y+SL+ L + R +A ++ S M + PD
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDI--HSVLLLGLCRKNHSVEAAK 434
+ +I G+V E YE++ + S+D DI +S+L+ GLC + EA +
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIR----RSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 435 LARFMLKK---------RIWLQGPYVDKIVEH 457
+ FM+ K I + G K VEH
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 186 LMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGIC 245
L + M ++ + ++ T ++ FC +L A M + G ++V + +LL+G C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 246 RLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPN 305
R + AL + +M G PNVV Y ++I C + AL +L+RME G P+
Sbjct: 163 RGDRVYDALYMFDQMVGMGY--KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 306 RVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFS 365
VT ++LI G C G +A +++ + +++L+ V+ R+ EAE+ +
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 366 KMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSS----VDSDIHSVLLL 421
+M+ + PD + S++I LC+ + L E E GF+ S D +S+L+
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSR------LDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 422 GLCRKNHSVEAAKL 435
G C+ KL
Sbjct: 335 GYCKSKKVEHGMKL 348
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 3/294 (1%)
Query: 147 EAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMI 206
EA L M + PD ++ CE G + A + M + P++I + S+I
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 207 KGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGD 266
G C G ++ A + + M R+G N+ ++AL+DG+C+ G E+A L ++ +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR-SDT 353
Query: 267 CSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAY 326
PNV TYTS+I +C + + A + RM+ G PN T +TLI G C G+ AY
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 327 QLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIREL 386
+L++ + G + + Y++ + L + R EA +L +K + G++ DG+ +++I+E
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 387 CLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFML 440
C + + + + K GF D ++++L+ CR+ E+ +L + ++
Sbjct: 474 CKQNDINQALAFFCRMNKTGF--EADMRLNNILIAAFCRQKKMKESERLFQLVV 525
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 144/336 (42%), Gaps = 12/336 (3%)
Query: 139 CEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPD 198
C++ +L N A + +M E L P+ Y +I C+ G A ELM MG P+
Sbjct: 369 CKEDKL-NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 199 IITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLG 258
I TY + I C R +A L G A+ V Y+ L+ C+ + +AL
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 259 EMEKEG--GDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGF 316
M K G D N + +I FC + MKE+ + + +LG P + T +++I +
Sbjct: 488 RMNKTGFEADMRLNNI----LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 317 CVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDG 376
C EG++D A + + G V Y SL+ L + + EA KL+ M+ G+ P
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Query: 377 LACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLA 436
+ + E C L E ++K ++ +V + L+ LC + AA
Sbjct: 604 VTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT-----LVRKLCSEKKVGVAALFF 658
Query: 437 RFMLKKRIWLQGPYVDKIVEHLKKSGDEELITNLPK 472
+ +L+K + +SG L+T+L +
Sbjct: 659 QKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTE 694
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 163/337 (48%), Gaps = 20/337 (5%)
Query: 92 HSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFN-LCEKARLANEAMW 150
H F +N+A E + +VE +GC + + N LC++ + A+
Sbjct: 178 HGLFQHNKASEA----------VALVERMVVKGCQPDLVTYGAVINGLCKRGE-PDLALN 226
Query: 151 VLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFC 210
+L KM + + D +IY+ VI C+ + A L M + PD+ TY S+I C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 211 NAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPN 270
N GR DA L M N+V +++L+D + G + A +L EM + D PN
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PN 344
Query: 271 VVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLID 330
+VTY S+I FC + EA I M + C P+ VT +TLI GFC + + +L
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 331 KVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGG 390
+ G V + Y++L+ + A+ +F +M++ GV P+ + + ++ LC G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 391 QVLEGFCLYEDIEKIGFLSSVDSDIHSVLLL--GLCR 425
++ + ++E ++K S ++ DI++ ++ G+C+
Sbjct: 465 KLEKAMVVFEYLQK----SKMEPDIYTYNIMSEGMCK 497
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 138 LCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYP 197
LC R + +A +L M E + P+ + +N++I F ++G +I A++L M + P
Sbjct: 285 LCNYGRWS-DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 198 DIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELL 257
+I+TY S+I GFC RL++A +F +M C ++V Y+ L++G C+ + +EL
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 258 GEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFC 317
+M + G N VTYT++I F A + +M + G PN +T +TL+ G C
Sbjct: 404 RDMSRRG--LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 318 VEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGL 377
G L++A + + + Y+ + + + ++++ LF + GVKPD +
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 378 ACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLAR 437
A + MI C G E + L+ +++ G L DS ++ L+ R +A+L +
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP--DSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 438 FM 439
M
Sbjct: 580 EM 581
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 24/360 (6%)
Query: 102 EMSRIKQNPSII--------------IDVVEAYKEEGCVVSVKMMKVIFN-----LCEKA 142
EM + + PSI+ D+V ++ E+ ++ V +N LC ++
Sbjct: 55 EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRS 114
Query: 143 RLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITY 202
+L+ A+ +L KM + P + N+++ FC + A L+ M + PD +T+
Sbjct: 115 QLSF-ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 173
Query: 203 VSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEK 262
+++ G + +A L + M GC +LV Y A+++G+C+ G + AL LL +MEK
Sbjct: 174 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 263 EGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNL 322
G +VV Y++VI C + +AL + M+ G P+ T S+LI C G
Sbjct: 234 --GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 323 DEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVM 382
+A +L+ ++ + ++SL+ + +L EAEKLF +M+ + P+ + + +
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 383 IRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARFMLKK 442
I C+ ++ E ++ + L V + ++ L+ G C+ V+ +L R M ++
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVT--YNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 13/266 (4%)
Query: 98 NRACEMSRIKQNPSIIIDVVEAYKEEGCVVSVKMMKVIFNLCEKARLANEAMWVLRKMPE 157
N C R+ + I +V + C+ V + N KA+ + M + R M
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVS----KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 158 FDLRPDTIIYNNVIRLFCEKGDMIAADELMKGMGLIDLYPDIITYVSMIKGFCNAGRLED 217
L +T+ Y +I F + D A + K M ++P+I+TY +++ G C G+LE
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 218 ACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVTYTSV 277
A +F+ +++ ++ Y+ + +G+C+ G +E +L + +G P+V+ Y ++
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG--VKPDVIAYNTM 526
Query: 278 IQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVVA--- 334
I FC KG+ +EA + +M+ G P+ T +TLI+ +G+ + +LI ++ +
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 335 GGSVSSGGCYSSLVVELVRTKRLKEA 360
G S+ G LV +++ RL +
Sbjct: 587 AGDASTYG----LVTDMLHDGRLDKG 608
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 190 MGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGS 249
M ++ + ++ TY MI C +L A + M + G ++V ++LL+G C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 250 MERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTI 309
+ A+ L+ +M + G P+ VT+T+++ EA+ +++RM GC P+ VT
Sbjct: 151 ISEAVALVDQMVEMG--YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 310 STLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLA 369
+I G C G D A L++K+ G + YS+++ L + + + +A LF++M
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 370 SGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHS 429
G++PD S +I LC G+ + L D+ + +V + + L+ ++
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT--FNSLIDAFAKEGKL 326
Query: 430 VEAAKLARFMLKKRI 444
+EA KL M+++ I
Sbjct: 327 IEAEKLFDEMIQRSI 341
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 4/267 (1%)
Query: 196 YPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALE 255
+P I+ + ++ + + + M+ G + NL Y+ +++ +CR + AL
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 256 LLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKG 315
+LG+M K G P++VT S++ FC + EA+ ++D+M +G P+ VT +TL+ G
Sbjct: 122 ILGKMMKLG--YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 316 FCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPD 375
EA L++++V G Y +++ L + A L +KM ++ D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 376 GLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKL 435
+ S +I LC V + L+ +++ G V + +S L+ LC +A++L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT--YSSLISCLCNYGRWSDASRL 297
Query: 436 ARFMLKKRIWLQGPYVDKIVEHLKKSG 462
ML+++I + +++ K G
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEG 324
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 8/233 (3%)
Query: 214 RLEDACGLFKVMKRHGCAANLVAYSALLDGICRLGSMERALELLGEMEKEGGDCSPNVVT 273
+L++A LF M + ++V +S LL I ++ + + +ME G S N+ T
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG--VSHNLYT 102
Query: 274 YTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCVEGNLDEAYQLIDKVV 333
Y +I C + + AL IL +M LG P+ VT+++L+ GFC + EA L+D++V
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 334 AGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLACSVMIRELCLGGQVL 393
G +++LV L + + EA L +M+ G +PD + +I LC G+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 394 EGFCLYEDIEKIGFLSSVDSD--IHSVLLLGLCRKNHSVEAAKLARFMLKKRI 444
L +EK +++D I+S ++ LC+ H +A L M K I
Sbjct: 223 LALNLLNKMEK----GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,213,993
Number of Sequences: 539616
Number of extensions: 6776714
Number of successful extensions: 23192
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 16033
Number of HSP's gapped (non-prelim): 2417
length of query: 475
length of database: 191,569,459
effective HSP length: 121
effective length of query: 354
effective length of database: 126,275,923
effective search space: 44701676742
effective search space used: 44701676742
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)