Query 011907
Match_columns 475
No_of_seqs 188 out of 906
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 06:32:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011907.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011907hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 2E-115 3E-120 877.4 33.6 390 49-450 41-435 (492)
2 PF05577 Peptidase_S28: Serine 100.0 2.6E-99 6E-104 798.6 21.2 385 60-475 1-412 (434)
3 KOG2182 Hydrolytic enzymes of 100.0 1.3E-97 3E-102 766.0 31.0 393 50-475 48-469 (514)
4 PF05576 Peptidase_S37: PS-10 100.0 3.7E-28 8.1E-33 247.3 18.0 168 55-255 33-202 (448)
5 PLN02298 hydrolase, alpha/beta 98.5 1.1E-06 2.3E-11 89.4 11.4 108 95-217 62-169 (330)
6 PLN02385 hydrolase; alpha/beta 98.3 3.5E-06 7.5E-11 86.6 11.6 88 115-216 108-196 (349)
7 TIGR01250 pro_imino_pep_2 prol 98.2 5.1E-06 1.1E-10 80.1 9.5 106 92-216 25-130 (288)
8 PF12697 Abhydrolase_6: Alpha/ 98.2 7.6E-06 1.6E-10 75.4 9.7 101 95-217 1-101 (228)
9 TIGR01840 esterase_phb esteras 98.2 6.9E-06 1.5E-10 78.5 9.2 118 92-217 12-130 (212)
10 TIGR01249 pro_imino_pep_1 prol 98.2 5.6E-06 1.2E-10 83.5 8.9 104 92-217 27-130 (306)
11 PRK00870 haloalkane dehalogena 98.2 1.8E-05 3.9E-10 79.3 12.0 77 123-216 73-149 (302)
12 TIGR02427 protocat_pcaD 3-oxoa 98.1 6.5E-06 1.4E-10 77.4 7.2 103 92-217 12-114 (251)
13 PRK10749 lysophospholipase L2; 98.1 2.4E-05 5.3E-10 79.9 11.2 88 121-217 79-166 (330)
14 PLN02824 hydrolase, alpha/beta 98.0 2.5E-05 5.5E-10 77.7 10.1 109 92-217 29-137 (294)
15 TIGR03056 bchO_mg_che_rel puta 98.0 2.8E-05 6.1E-10 75.5 9.2 84 114-217 47-130 (278)
16 TIGR02240 PHA_depoly_arom poly 98.0 3.8E-05 8.3E-10 75.8 9.8 115 75-217 12-126 (276)
17 PHA02857 monoglyceride lipase; 97.9 6.8E-05 1.5E-09 73.7 11.2 107 93-217 25-132 (276)
18 TIGR03695 menH_SHCHC 2-succiny 97.9 4.2E-05 9E-10 71.5 9.0 101 94-216 3-104 (251)
19 TIGR03343 biphenyl_bphD 2-hydr 97.9 4.4E-05 9.6E-10 74.9 8.5 106 92-216 30-135 (282)
20 TIGR03611 RutD pyrimidine util 97.9 4.1E-05 8.9E-10 72.8 7.7 101 92-215 12-113 (257)
21 PRK10673 acyl-CoA esterase; Pr 97.8 7.1E-05 1.5E-09 72.2 9.2 102 91-217 15-117 (255)
22 PF00561 Abhydrolase_1: alpha/ 97.8 5.2E-05 1.1E-09 71.0 7.7 77 125-216 2-78 (230)
23 TIGR01607 PST-A Plasmodium sub 97.8 9.2E-05 2E-09 76.0 9.7 87 121-217 72-185 (332)
24 PRK03592 haloalkane dehalogena 97.8 9.4E-05 2E-09 73.7 9.5 102 92-217 27-128 (295)
25 PRK10566 esterase; Provisional 97.8 0.00016 3.4E-09 70.1 10.5 111 92-214 26-140 (249)
26 PLN02211 methyl indole-3-aceta 97.7 0.00019 4.1E-09 71.6 10.6 105 91-216 16-121 (273)
27 PLN02894 hydrolase, alpha/beta 97.7 0.00016 3.4E-09 76.4 10.4 113 84-215 97-209 (402)
28 PLN02511 hydrolase 97.7 0.00021 4.5E-09 75.1 10.3 110 91-217 98-210 (388)
29 PLN02965 Probable pheophorbida 97.7 0.00025 5.4E-09 69.3 9.9 104 92-216 3-106 (255)
30 PLN02652 hydrolase; alpha/beta 97.6 0.00023 5E-09 75.0 9.4 85 116-217 157-245 (395)
31 PLN03084 alpha/beta hydrolase 97.6 0.00028 6.1E-09 74.1 9.5 105 93-217 128-232 (383)
32 PRK11126 2-succinyl-6-hydroxy- 97.6 0.00037 8E-09 66.7 9.4 99 93-217 2-102 (242)
33 KOG1455 Lysophospholipase [Lip 97.5 0.00052 1.1E-08 69.0 9.8 85 122-220 81-166 (313)
34 COG2267 PldB Lysophospholipase 97.5 0.0005 1.1E-08 69.8 9.9 85 118-218 56-142 (298)
35 PRK08775 homoserine O-acetyltr 97.5 0.00041 8.9E-09 71.2 8.9 104 92-215 57-171 (343)
36 PRK06489 hypothetical protein; 97.4 0.0028 6.1E-08 65.5 14.7 111 92-214 69-186 (360)
37 TIGR01738 bioH putative pimelo 97.4 0.00036 7.9E-09 65.3 7.0 91 93-212 5-95 (245)
38 PRK14875 acetoin dehydrogenase 97.4 0.00074 1.6E-08 69.1 9.8 101 92-216 131-231 (371)
39 KOG4178 Soluble epoxide hydrol 97.4 0.00098 2.1E-08 67.7 10.3 118 77-218 32-149 (322)
40 PF00326 Peptidase_S9: Prolyl 97.4 9.1E-05 2E-09 70.4 2.7 93 116-217 7-99 (213)
41 PRK03204 haloalkane dehalogena 97.4 0.00064 1.4E-08 68.0 8.9 103 92-217 34-136 (286)
42 PLN02980 2-oxoglutarate decarb 97.4 0.00069 1.5E-08 83.2 10.7 122 78-215 1357-1478(1655)
43 PLN03087 BODYGUARD 1 domain co 97.3 0.00073 1.6E-08 73.0 9.0 105 93-217 202-309 (481)
44 PLN02578 hydrolase 97.3 0.00076 1.7E-08 69.6 8.8 97 92-212 86-182 (354)
45 PRK10985 putative hydrolase; P 97.3 0.0011 2.3E-08 67.7 9.7 108 93-217 58-168 (324)
46 TIGR03101 hydr2_PEP hydrolase, 97.3 0.0014 3E-08 65.6 10.1 80 122-217 55-134 (266)
47 TIGR02821 fghA_ester_D S-formy 97.3 0.0018 3.8E-08 64.6 10.9 122 92-217 41-173 (275)
48 PLN02679 hydrolase, alpha/beta 97.3 0.0012 2.5E-08 68.5 9.6 101 93-216 89-190 (360)
49 TIGR00976 /NonD putative hydro 97.2 0.0019 4.1E-08 70.9 10.1 110 92-217 21-132 (550)
50 PF10503 Esterase_phd: Esteras 97.1 0.0022 4.7E-08 62.5 8.8 117 92-217 15-132 (220)
51 PRK10349 carboxylesterase BioH 97.1 0.0015 3.3E-08 63.4 7.9 90 94-212 15-104 (256)
52 PRK07581 hypothetical protein; 97.0 0.002 4.3E-08 65.8 8.2 115 92-214 40-156 (339)
53 TIGR03100 hydr1_PEP hydrolase, 96.9 0.0062 1.3E-07 60.6 10.7 105 93-218 27-135 (274)
54 PRK05855 short chain dehydroge 96.9 0.0019 4E-08 70.2 7.1 104 93-217 26-131 (582)
55 PLN02442 S-formylglutathione h 96.9 0.011 2.4E-07 59.3 12.0 121 91-217 45-178 (283)
56 PRK05077 frsA fermentation/res 96.8 0.0054 1.2E-07 65.1 9.7 108 92-218 193-301 (414)
57 KOG2564 Predicted acetyltransf 96.7 0.0093 2E-07 59.6 9.3 118 56-200 45-164 (343)
58 PF12695 Abhydrolase_5: Alpha/ 96.7 0.0042 9.2E-08 54.3 6.2 93 94-215 1-93 (145)
59 TIGR01836 PHA_synth_III_C poly 96.6 0.0085 1.8E-07 61.7 9.4 88 112-218 84-172 (350)
60 PF07859 Abhydrolase_3: alpha/ 96.6 0.0037 8E-08 58.9 6.0 103 95-217 1-110 (211)
61 PRK10115 protease 2; Provision 96.6 0.0052 1.1E-07 69.4 8.1 114 92-217 444-559 (686)
62 PRK11460 putative hydrolase; P 96.5 0.016 3.5E-07 56.4 9.7 59 159-217 80-138 (232)
63 TIGR03502 lipase_Pla1_cef extr 96.5 0.013 2.7E-07 66.7 10.0 80 122-202 475-575 (792)
64 TIGR01392 homoserO_Ac_trn homo 96.4 0.0076 1.7E-07 62.0 7.2 89 122-217 71-162 (351)
65 COG0596 MhpC Predicted hydrola 96.3 0.01 2.2E-07 54.6 6.6 100 94-217 23-123 (282)
66 cd00707 Pancreat_lipase_like P 96.0 0.021 4.5E-07 57.3 7.8 82 118-212 61-142 (275)
67 PRK10162 acetyl esterase; Prov 96.0 0.03 6.4E-07 57.2 9.0 93 92-204 80-176 (318)
68 PLN00021 chlorophyllase 95.7 0.045 9.8E-07 56.0 9.0 37 182-218 126-166 (313)
69 TIGR03230 lipo_lipase lipoprot 95.7 0.098 2.1E-06 56.1 11.6 74 123-209 73-146 (442)
70 PLN02872 triacylglycerol lipas 95.6 0.04 8.6E-07 58.3 8.3 106 92-205 74-182 (395)
71 PF11144 DUF2920: Protein of u 95.6 0.025 5.4E-07 59.4 6.6 57 161-218 162-220 (403)
72 PF09752 DUF2048: Uncharacteri 95.5 0.074 1.6E-06 54.9 9.5 150 49-208 49-201 (348)
73 COG1506 DAP2 Dipeptidyl aminop 95.4 0.027 5.9E-07 62.9 6.3 109 94-217 395-507 (620)
74 cd00312 Esterase_lipase Estera 95.2 0.036 7.8E-07 59.7 6.4 114 91-218 93-214 (493)
75 PTZ00472 serine carboxypeptida 95.2 0.52 1.1E-05 50.9 15.2 64 123-197 121-186 (462)
76 COG3509 LpqC Poly(3-hydroxybut 95.0 0.16 3.4E-06 51.3 9.7 108 92-215 60-179 (312)
77 PF00975 Thioesterase: Thioest 94.9 0.049 1.1E-06 51.9 5.8 81 93-200 1-84 (229)
78 KOG2382 Predicted alpha/beta h 94.7 0.46 1E-05 48.5 12.5 102 91-211 51-153 (315)
79 PF00756 Esterase: Putative es 94.3 0.051 1.1E-06 52.6 4.4 50 168-217 101-150 (251)
80 COG0657 Aes Esterase/lipase [L 94.3 0.19 4.1E-06 50.8 8.6 93 92-204 78-174 (312)
81 PRK00175 metX homoserine O-ace 94.2 0.22 4.8E-06 52.0 9.2 87 123-216 91-181 (379)
82 KOG4391 Predicted alpha/beta h 93.8 0.092 2E-06 50.9 4.9 157 92-276 77-248 (300)
83 COG0429 Predicted hydrolase of 93.5 0.35 7.5E-06 49.7 8.8 123 74-217 60-185 (345)
84 TIGR01838 PHA_synth_I poly(R)- 93.4 0.92 2E-05 49.9 12.5 107 92-217 188-302 (532)
85 PRK06765 homoserine O-acetyltr 93.0 0.17 3.7E-06 53.4 6.0 51 157-213 141-192 (389)
86 PF05677 DUF818: Chlamydia CHL 93.0 0.41 9E-06 49.4 8.3 98 92-205 137-238 (365)
87 PF07819 PGAP1: PGAP1-like pro 92.8 0.63 1.4E-05 45.3 9.1 54 166-219 66-125 (225)
88 KOG4409 Predicted hydrolase/ac 92.1 0.33 7.1E-06 50.2 6.3 93 92-209 90-187 (365)
89 PRK11071 esterase YqiA; Provis 92.0 0.6 1.3E-05 44.0 7.7 39 161-205 46-84 (190)
90 COG2021 MET2 Homoserine acetyl 91.7 0.26 5.7E-06 51.2 5.2 103 163-274 129-243 (368)
91 KOG2281 Dipeptidyl aminopeptid 91.1 0.29 6.4E-06 54.0 4.9 88 119-216 672-761 (867)
92 COG1770 PtrB Protease II [Amin 91.0 0.28 6E-06 54.3 4.8 143 57-214 403-559 (682)
93 PRK13604 luxD acyl transferase 90.7 1.4 3E-05 45.2 9.2 99 93-215 37-139 (307)
94 PF02129 Peptidase_S15: X-Pro 90.6 0.59 1.3E-05 46.3 6.4 111 92-217 19-136 (272)
95 PRK10439 enterobactin/ferric e 90.2 0.52 1.1E-05 50.1 6.0 48 170-217 274-323 (411)
96 KOG1838 Alpha/beta hydrolase [ 90.1 0.95 2.1E-05 47.9 7.6 109 92-217 124-235 (409)
97 COG3208 GrsT Predicted thioest 90.0 0.26 5.7E-06 48.5 3.2 59 153-217 49-114 (244)
98 PF10230 DUF2305: Uncharacteri 89.7 2.8 6E-05 41.8 10.3 101 94-204 3-106 (266)
99 PF03403 PAF-AH_p_II: Platelet 89.1 0.52 1.1E-05 49.6 4.9 40 92-134 99-138 (379)
100 PLN02733 phosphatidylcholine-s 88.5 0.87 1.9E-05 48.9 6.0 58 159-218 141-202 (440)
101 COG4099 Predicted peptidase [G 87.8 3.2 6.9E-05 42.3 9.1 124 73-213 172-300 (387)
102 COG0400 Predicted esterase [Ge 87.8 0.91 2E-05 43.8 5.2 56 162-217 79-134 (207)
103 KOG1553 Predicted alpha/beta h 87.6 2.7 5.9E-05 43.5 8.6 120 97-251 245-366 (517)
104 KOG1552 Predicted alpha/beta h 87.5 2.8 6.2E-05 41.6 8.5 100 93-214 60-160 (258)
105 PF00135 COesterase: Carboxyle 87.4 1.5 3.2E-05 47.2 7.1 115 92-219 124-247 (535)
106 PF02230 Abhydrolase_2: Phosph 86.9 1 2.2E-05 42.9 5.1 57 161-218 85-141 (216)
107 PRK05371 x-prolyl-dipeptidyl a 86.8 2.6 5.7E-05 48.5 9.0 85 118-216 274-372 (767)
108 COG2819 Predicted hydrolase of 86.3 0.89 1.9E-05 45.4 4.3 44 175-218 130-173 (264)
109 KOG1454 Predicted hydrolase/ac 86.3 3.4 7.4E-05 42.5 8.8 106 92-217 58-166 (326)
110 PF06259 Abhydrolase_8: Alpha/ 85.9 1.9 4.1E-05 40.7 6.0 57 159-216 87-143 (177)
111 KOG2100 Dipeptidyl aminopeptid 85.1 1 2.3E-05 51.6 4.7 115 92-218 525-644 (755)
112 PF05728 UPF0227: Uncharacteri 84.4 1.5 3.1E-05 41.7 4.6 43 157-205 40-82 (187)
113 PF01764 Lipase_3: Lipase (cla 83.2 1.7 3.8E-05 37.9 4.4 37 181-217 63-105 (140)
114 cd00741 Lipase Lipase. Lipase 81.2 2.6 5.7E-05 37.8 4.9 37 180-216 26-66 (153)
115 PF06500 DUF1100: Alpha/beta h 80.3 3.1 6.8E-05 44.2 5.7 111 91-219 188-298 (411)
116 PF08840 BAAT_C: BAAT / Acyl-C 79.8 3.3 7.1E-05 39.8 5.3 46 171-217 11-56 (213)
117 PF02450 LCAT: Lecithin:choles 79.1 3.5 7.5E-05 43.5 5.6 58 158-218 98-161 (389)
118 cd00519 Lipase_3 Lipase (class 79.0 4.5 9.8E-05 38.8 6.0 36 164-201 112-147 (229)
119 KOG1282 Serine carboxypeptidas 78.8 48 0.001 35.9 14.1 113 79-203 61-193 (454)
120 PF06821 Ser_hydrolase: Serine 78.7 4.8 0.00011 37.4 5.9 53 165-217 38-91 (171)
121 PF12146 Hydrolase_4: Putative 78.5 4 8.7E-05 33.0 4.6 72 84-171 7-79 (79)
122 PRK07868 acyl-CoA synthetase; 78.4 20 0.00043 42.5 12.2 108 92-217 67-177 (994)
123 PLN02454 triacylglycerol lipas 78.1 6.9 0.00015 41.7 7.4 40 162-201 208-247 (414)
124 PLN02571 triacylglycerol lipas 77.6 3 6.4E-05 44.4 4.5 38 160-201 208-245 (413)
125 PLN02310 triacylglycerol lipas 77.6 5.4 0.00012 42.4 6.4 56 160-217 189-248 (405)
126 PF01738 DLH: Dienelactone hyd 77.2 2.3 4.9E-05 40.4 3.3 94 114-215 33-130 (218)
127 PF00450 Peptidase_S10: Serine 76.6 3.7 8.1E-05 42.7 5.0 85 123-217 85-181 (415)
128 PLN03037 lipase class 3 family 75.8 6.2 0.00013 43.1 6.4 56 160-217 298-358 (525)
129 COG0412 Dienelactone hydrolase 75.7 5.8 0.00013 38.9 5.8 55 157-212 87-141 (236)
130 PF11187 DUF2974: Protein of u 74.8 6.7 0.00015 38.2 5.9 50 164-216 69-122 (224)
131 COG0627 Predicted esterase [Ge 74.6 8.6 0.00019 39.5 6.9 118 91-217 52-187 (316)
132 PLN02761 lipase class 3 family 74.6 4.1 8.8E-05 44.5 4.6 41 160-200 272-312 (527)
133 PLN02324 triacylglycerol lipas 74.5 4 8.7E-05 43.4 4.5 38 160-201 197-234 (415)
134 COG3319 Thioesterase domains o 73.6 9.1 0.0002 38.2 6.6 40 158-202 46-85 (257)
135 PRK10252 entF enterobactin syn 73.2 17 0.00037 43.9 10.0 93 92-211 1068-1165(1296)
136 PLN02408 phospholipase A1 73.1 4.5 9.8E-05 42.4 4.4 37 160-200 182-218 (365)
137 PLN02753 triacylglycerol lipas 72.7 4.6 0.0001 44.1 4.5 40 160-200 291-330 (531)
138 COG4757 Predicted alpha/beta h 71.9 7.3 0.00016 38.5 5.2 90 115-216 49-138 (281)
139 PLN02802 triacylglycerol lipas 71.0 9.4 0.0002 41.6 6.3 53 160-216 312-369 (509)
140 PF03583 LIP: Secretory lipase 71.0 13 0.00029 37.5 7.2 86 117-217 20-113 (290)
141 PF03096 Ndr: Ndr family; Int 69.8 9.3 0.0002 38.7 5.7 59 151-215 74-132 (283)
142 PF05448 AXE1: Acetyl xylan es 67.6 6.6 0.00014 40.4 4.2 87 121-212 107-204 (320)
143 KOG4627 Kynurenine formamidase 67.2 11 0.00024 36.7 5.2 103 91-216 65-171 (270)
144 COG1647 Esterase/lipase [Gener 65.9 59 0.0013 32.0 10.0 111 92-220 6-121 (243)
145 PRK04940 hypothetical protein; 62.5 15 0.00033 34.7 5.3 54 158-215 38-91 (180)
146 PLN02209 serine carboxypeptida 61.1 45 0.00097 35.9 9.2 62 156-217 140-212 (437)
147 PLN00413 triacylglycerol lipas 60.9 7.5 0.00016 42.0 3.2 21 180-200 282-302 (479)
148 PLN02719 triacylglycerol lipas 60.6 11 0.00024 41.2 4.4 40 160-200 277-316 (518)
149 PLN02213 sinapoylglucose-malat 59.8 13 0.00027 38.1 4.6 42 160-202 29-75 (319)
150 PLN02934 triacylglycerol lipas 59.7 12 0.00027 40.8 4.6 21 180-200 319-339 (515)
151 PF07519 Tannase: Tannase and 59.2 13 0.00028 40.5 4.7 63 155-217 79-150 (474)
152 PLN02162 triacylglycerol lipas 58.2 9.9 0.00022 41.1 3.6 20 180-199 276-295 (475)
153 COG2272 PnbA Carboxylesterase 58.2 38 0.00082 36.9 7.9 102 91-205 92-202 (491)
154 KOG2369 Lecithin:cholesterol a 56.7 17 0.00037 39.2 5.0 46 160-207 162-207 (473)
155 PF06057 VirJ: Bacterial virul 55.8 20 0.00044 34.2 4.9 53 158-212 46-98 (192)
156 PF12740 Chlorophyllase2: Chlo 54.9 51 0.0011 33.0 7.8 102 92-217 16-130 (259)
157 KOG1515 Arylacetamide deacetyl 51.3 56 0.0012 34.0 7.7 128 58-214 64-204 (336)
158 PF01674 Lipase_2: Lipase (cla 50.8 22 0.00048 34.6 4.4 40 161-203 57-96 (219)
159 KOG3724 Negative regulator of 49.8 20 0.00044 41.0 4.4 35 184-219 184-222 (973)
160 PLN03016 sinapoylglucose-malat 49.4 27 0.00058 37.6 5.2 57 161-217 143-210 (433)
161 KOG4569 Predicted lipase [Lipi 48.3 24 0.00052 36.5 4.5 35 160-200 155-189 (336)
162 PF05057 DUF676: Putative seri 43.8 36 0.00077 32.7 4.7 45 157-201 53-97 (217)
163 KOG1516 Carboxylesterase and r 41.9 66 0.0014 35.1 6.9 114 93-220 112-235 (545)
164 COG2382 Fes Enterochelin ester 40.5 21 0.00046 36.4 2.5 49 169-217 162-212 (299)
165 PF08538 DUF1749: Protein of u 40.0 1.3E+02 0.0028 30.9 8.1 105 94-218 34-148 (303)
166 COG4947 Uncharacterized protei 40.0 9.4 0.0002 36.0 -0.0 114 91-219 25-138 (227)
167 COG3946 VirJ Type IV secretory 39.9 27 0.00059 37.1 3.3 39 152-192 294-336 (456)
168 PF11339 DUF3141: Protein of u 39.6 53 0.0011 36.2 5.4 52 166-218 125-176 (581)
169 PF07172 GRP: Glycine rich pro 39.0 30 0.00065 29.3 2.8 20 1-21 1-20 (95)
170 KOG3111 D-ribulose-5-phosphate 38.0 39 0.00085 32.4 3.7 13 196-208 160-172 (224)
171 TIGR01839 PHA_synth_II poly(R) 37.5 1.4E+02 0.0031 33.2 8.6 85 115-217 239-328 (560)
172 PF03283 PAE: Pectinacetyleste 37.4 1.4E+02 0.0031 31.3 8.2 47 171-218 145-197 (361)
173 smart00824 PKS_TE Thioesterase 36.3 1.8E+02 0.0038 26.1 7.9 23 181-203 63-85 (212)
174 PF07632 DUF1593: Protein of u 36.3 50 0.0011 33.0 4.4 50 158-210 127-177 (260)
175 COG3545 Predicted esterase of 34.9 68 0.0015 30.4 4.7 52 165-217 42-94 (181)
176 PLN02847 triacylglycerol lipas 34.5 44 0.00096 37.3 4.0 33 180-212 249-287 (633)
177 KOG1551 Uncharacterized conser 32.2 29 0.00062 35.1 1.9 118 73-206 100-219 (371)
178 COG5153 CVT17 Putative lipase 31.1 56 0.0012 33.3 3.8 35 180-217 274-308 (425)
179 KOG4540 Putative lipase essent 31.1 56 0.0012 33.3 3.8 35 180-217 274-308 (425)
180 PLN02517 phosphatidylcholine-s 29.7 79 0.0017 35.5 4.9 41 160-202 193-233 (642)
181 PF07992 Pyr_redox_2: Pyridine 28.1 38 0.00083 31.0 2.0 20 183-202 1-20 (201)
182 KOG2237 Predicted serine prote 27.9 44 0.00095 37.5 2.6 61 156-216 523-583 (712)
183 PF06342 DUF1057: Alpha/beta h 27.7 2.1E+02 0.0046 29.2 7.2 97 95-213 38-135 (297)
184 PF01083 Cutinase: Cutinase; 27.1 1E+02 0.0022 28.8 4.6 88 116-218 29-123 (179)
185 PRK00091 miaA tRNA delta(2)-is 25.4 2.1E+02 0.0046 29.2 7.0 35 93-132 4-38 (307)
186 KOG4667 Predicted esterase [Li 25.4 1.8E+02 0.0038 28.8 5.9 70 120-205 59-128 (269)
187 KOG2931 Differentiation-relate 25.1 1.7E+02 0.0036 30.1 5.9 78 152-237 98-175 (326)
188 PRK14758 hypothetical protein; 24.9 1E+02 0.0022 19.9 2.8 19 4-22 6-24 (27)
189 PRK14905 triosephosphate isome 24.4 4.2E+02 0.009 27.8 9.0 108 158-276 188-298 (355)
190 PF06028 DUF915: Alpha/beta hy 23.4 1E+02 0.0022 30.7 4.1 38 164-203 87-124 (255)
191 KOG2984 Predicted hydrolase [G 23.2 85 0.0018 30.7 3.3 104 94-218 44-152 (277)
192 PF12715 Abhydrolase_7: Abhydr 22.2 2.5E+02 0.0053 29.9 6.7 91 116-217 154-260 (390)
193 KOG3975 Uncharacterized conser 22.0 5.5E+02 0.012 26.0 8.6 111 74-202 15-126 (301)
194 PF01221 Dynein_light: Dynein 21.5 67 0.0015 26.4 2.0 28 164-194 36-65 (89)
195 TIGR03169 Nterm_to_SelD pyridi 20.5 66 0.0014 32.9 2.2 17 183-199 1-17 (364)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1.6e-115 Score=877.36 Aligned_cols=390 Identities=51% Similarity=0.984 Sum_probs=368.8
Q ss_pred CCCcceeeeEEecCCCCCCCCCCCCeeeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEE
Q 011907 49 SQGLYKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVF 128 (475)
Q Consensus 49 ~~~~~~~~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~ 128 (475)
.+..++++||.|+||||++.+. .||+|||++|++||++ .+||||+|+|+||++++|.+++|||+++|+++||+||+
T Consensus 41 ~~~~ye~~yf~q~LDHFsF~~~--~tF~qRylin~~fw~~--g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVF 116 (492)
T KOG2183|consen 41 GEYNYETRYFQQPLDHFSFTDN--KTFDQRYLINDDFWKK--GEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVF 116 (492)
T ss_pred ccccceeEEeecccccccccCc--cceeeEEEEecccccC--CCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEE
Confidence 4677999999999999999865 8999999999999985 24999999999999999999999999999999999999
Q ss_pred EeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeE
Q 011907 129 IEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAI 208 (475)
Q Consensus 129 lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~ 208 (475)
+||||||||+||++. ++++.++|.|||+||||||+|.+++++|+++++..+|||+||||||||||||||+||||++.
T Consensus 117 aEHRyYGeS~PFG~~---s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~ 193 (492)
T KOG2183|consen 117 AEHRYYGESLPFGSQ---SYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVL 193 (492)
T ss_pred eehhccccCCCCcch---hccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhh
Confidence 999999999999984 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccccccCCcCchhhhHHHHHhhhcCChhhHHHHHHHHHHHHHHhcCCCcHHHHHHHhhhcCCCC--hHHHHHH
Q 011907 209 GALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICKSEK--NLAIESW 286 (475)
Q Consensus 209 gavASSAPv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~g~~~Lk~~F~lc~~l~--~~d~~~~ 286 (475)
||+||||||++|++.+|...|+.+|+++|+..+++|.+.|+++|..|+++..+++|++.|++.|++|.+++ ..++..|
T Consensus 194 GAlAaSAPvl~f~d~vp~~~f~~ivT~~F~~as~~C~~~I~~sW~ai~~l~~~~nG~q~Ls~~f~lc~~ln~d~~~l~d~ 273 (492)
T KOG2183|consen 194 GALAASAPVLYFEDTVPKDVFYRIVTRDFKDASPNCRNTIRKSWDAIDRLAAKDNGLQILSKAFKLCKPLNDDIGDLKDY 273 (492)
T ss_pred hhhhccCceEeecCCCCcchhhhHHHHHHHhhcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHhhhcccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999984 4678999
Q ss_pred HHHhhhhhhhccCCCCCCCCCCCCCCcHHHHhhhccCCCCC-chHHHHHHHHhhhhhcccCCcccccCCCCCCCC--CCC
Q 011907 287 LSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTG-NDVFAKLYGAASVYYNYSGTAKCFDLNGDSDPH--GLS 363 (475)
Q Consensus 287 l~~~~~~~~~~~y~~~~~~~~~~p~~~v~~~C~~i~~~~~~-~~~~~~l~~~~~~~~n~~~~~~C~d~~~~~~~~--~~r 363 (475)
++.++.+++|+|||++++|+.++|++||+++|+.|++.... .+.++++++++++||||+|+..|+|+++++..+ +.|
T Consensus 274 l~ea~~ylAMVdYPy~t~Fl~pLPa~PV~~~C~~i~~~~~~~~~ll~~i~a~~~~yyNytg~~~C~d~sd~t~~~~~d~~ 353 (492)
T KOG2183|consen 274 LREAYEYLAMVDYPYPTSFLAPLPAWPVKVVCKYINAPGPNDSDLLDRIFAAVNLYYNYTGSEKCYDISDPTYGSGLDDL 353 (492)
T ss_pred HHHHHHHHHHhcCCCCccccCcCCCCcHHHHHHHhccCCCChHHHHHHHHHHhhheeccCCCcchhccccccCCCCCCcC
Confidence 99999999999999999999999999999999999876544 678999999999999999999999998655433 358
Q ss_pred cceeeeecccccccCCCCCCCCCcCCCCChHHHHHHHHhhhCCCCChhHHHHhhCCCCccccccCCCCeEEEECCCCCCC
Q 011907 364 EWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPW 443 (475)
Q Consensus 364 ~W~wQtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~FGi~~~~~~~n~~yGG~~~~~~~~~~~snIiFsNG~~DPW 443 (475)
+|.||+|||++|++++++..+||++.++|.+.+++.|.+.||++|+|+|++++|||.++.. .|||||+||.+|||
T Consensus 354 gW~~QaCtEmVMp~~~ng~~~mf~~~~fn~~~y~e~C~~~~~v~prP~wi~t~fgg~~l~~-----~SNiIFSNG~LDPW 428 (492)
T KOG2183|consen 354 GWPWQACTEMVMPMCSNGVDDMFPDCPFNSESYQEGCMQTFGVTPRPKWITTEFGGADLSA-----FSNIIFSNGLLDPW 428 (492)
T ss_pred CCchhhhhhhhhccccCCCcccCCCCCCCHHHHHHHHHHhcCCCCCCcceehhhccccchh-----hcceeeeCCCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999988764 59999999999999
Q ss_pred CCCCccc
Q 011907 444 SGGGYDL 450 (475)
Q Consensus 444 ~~~gv~~ 450 (475)
+++||++
T Consensus 429 SGGGV~~ 435 (492)
T KOG2183|consen 429 SGGGVLK 435 (492)
T ss_pred cCcCeec
Confidence 9999988
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=2.6e-99 Score=798.55 Aligned_cols=385 Identities=39% Similarity=0.703 Sum_probs=277.2
Q ss_pred ecCCCCCCCCCCCCeeeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCcc
Q 011907 60 QILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIP 139 (475)
Q Consensus 60 Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P 139 (475)
|+||||++++. +||+||||+|++||++ +||||||+|||++++.....+|++.+||+++||+||+|||||||+|+|
T Consensus 1 Q~lDHf~~~~~--~tf~qRY~~n~~~~~~---~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P 75 (434)
T PF05577_consen 1 QPLDHFNPSNN--GTFSQRYWVNDQYYKP---GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQP 75 (434)
T ss_dssp EES-SS-SSTT---EEEEEEEEE-TT--T---TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-T
T ss_pred CCCCCCCCCCC--CeEEEEEEEEhhhcCC---CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCC
Confidence 89999998755 8999999999999974 699999999999999877788999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCC-CCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 140 YGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 140 ~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~-~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
++++ +++||||||+||||||+|+||+++|.++. .+++|||+|||||||+||||+|+||||+|+|||||||||+
T Consensus 76 ~~~~------s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 76 FGDL------STENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGGG------GGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cccc------chhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 9998 99999999999999999999999998774 4778999999999999999999999999999999999998
Q ss_pred cccCCcCchhhhHHHHHhhhcCChhhHHHHHHHHHHHHHHhcCCCcHHHHHHHhhhcCCCC---hHHHHHHHHHhh-hhh
Q 011907 219 NFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICKSEK---NLAIESWLSTAF-VYT 294 (475)
Q Consensus 219 a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~g~~~Lk~~F~lc~~l~---~~d~~~~l~~~~-~~~ 294 (475)
+ ++||++|+++|++++...+++|+++|++++++|++++.+++++++|+++|++|.+++ +.|+..++..+. .++
T Consensus 150 a---~~df~~y~~~v~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~~~~~l~~~f~~~~~~~~~~~~d~~~~~~~~~~~~~ 226 (434)
T PF05577_consen 150 A---KVDFWEYFEVVTESLRKYGPNCYDAIRAAFDQIDKLLKTGNGRQQLKKKFKLCFPLDDKNDDDFAYFFSSIADAFQ 226 (434)
T ss_dssp H---CCTTTHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHCCTCHHHHHHHHHCTBSS---TCHCHHHHHHHHHHHHHHH
T ss_pred e---ecccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhhcccHHHHHHHHhhhccccccccchHHHHHHHHHHHHHH
Confidence 6 579999999999999888888999999999999999999888999999999999872 367777766543 456
Q ss_pred hhccCCCCCCCCCCCCCCcHHHHhhhccCCCCCchHHHHHHHHhhhhhcccC---Ccc-------cccCCCCCCC----C
Q 011907 295 AMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSG---TAK-------CFDLNGDSDP----H 360 (475)
Q Consensus 295 ~~~~y~~~~~~~~~~p~~~v~~~C~~i~~~~~~~~~~~~l~~~~~~~~n~~~---~~~-------C~d~~~~~~~----~ 360 (475)
.+++|+++.++..++|..++.++|+.|++.... +...++.....++.+... ... |.+.....+. .
T Consensus 227 ~~~qy~~~~~~~~~~~~~~i~~~C~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (434)
T PF05577_consen 227 GMVQYPYPGNFNSPLPAWPIRQLCDSLTNASWP-DEVLRLAALAQWYNNFNTTCYSNSCADFDYNCFDSTYDDSSFDDNA 305 (434)
T ss_dssp HHT--SS-EESSSEE-SSHHHHHHHHCHTSSSH-HHHHHHHHHHHHHCCCH-SCCHHCCC--SS-BSSTT---SS----H
T ss_pred HHHhcCCCcccccCCCCcchHHHhhhhcccccC-chhHHHHHHHHHHHHhcCccccccccccccccccCCCCcccccccc
Confidence 788998888888888889999999999875433 222233332333222211 111 2221111111 1
Q ss_pred CCCcceeeeecccccccCCCCCCCCCcCCCCChHHHHHHHHhhhCCCC-------ChhHHHHhhCC-CCccccccCCCCe
Q 011907 361 GLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDP-------RPNWITTEFGG-HKIGLVLKRFASN 432 (475)
Q Consensus 361 ~~r~W~wQtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~FGi~~-------~~~~~n~~yGG-~~~~~~~~~~~sn 432 (475)
+.|+|.||+|||||||||+++..++|+ +.++++++.++|+++||+.+ .++++|.+||| .+++ ++|
T Consensus 306 ~~R~W~wQtCtE~G~fqt~~~~~~l~~-~~~~l~~~~~~C~~~Fg~~~~~~~i~~~~~~tN~~YGG~~~~~------~tn 378 (434)
T PF05577_consen 306 DDRQWLWQTCTEFGYFQTADGPNSLFS-RLVNLDYYQDQCQDVFGPGPNPESIPPNVDWTNNYYGGWWNPN------ATN 378 (434)
T ss_dssp HHHHHHHHHCCT-B----B-SSSSSS--B---HHHHHHHHHHHHS----T------TCHHHHHHTTT--TT--------S
T ss_pred cchhhHHHhhhhccceeccCCCCCccc-CCCCHHHHHHHHHHHhCCCccccccccchhHHhheeCccccCC------CCe
Confidence 359999999999999999998888996 68999999999999998543 45789999999 7776 699
Q ss_pred EEEECCCCCCCCCCCcccCCccccccccccceeeeeeeecccC
Q 011907 433 IIFFNGLRDPWSGGGYDLYPFAIQTSLSVEKIFITFCICICFH 475 (475)
Q Consensus 433 IiFsNG~~DPW~~~gv~~~p~~~~~~~~~~~~~~~~~~~~~~~ 475 (475)
|+|+||++||||.+||++. .+.. ++.++|-||.|
T Consensus 379 viFtNG~~DPW~~lgv~~~-------~~~~--~~~~~I~g~~H 412 (434)
T PF05577_consen 379 VIFTNGELDPWRALGVTSD-------SSDS--VPAIVIPGGAH 412 (434)
T ss_dssp EEEEEETT-CCGGGS--S--------SSSS--EEEEEETT--T
T ss_pred EEeeCCCCCCcccccCCCC-------CCCC--cccEEECCCee
Confidence 9999999999999998763 2222 24567788887
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1.3e-97 Score=765.98 Aligned_cols=393 Identities=31% Similarity=0.560 Sum_probs=328.9
Q ss_pred CCcceeeeEEecCCCCCCCCCCCCeeeeEEEEeccccCCCCCCCcEEEEeCCCCCcc--ccccccchhhchhhhcCceEE
Q 011907 50 QGLYKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIE--WFAQNTGFMYDVAPKFKALLV 127 (475)
Q Consensus 50 ~~~~~~~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~--~~~~~~g~~~~lA~~~gA~vv 127 (475)
....++.||+|++|||+.++ +.|.||||++.++|. +++|||||||||||++. |.....+.+.++|+++||.|+
T Consensus 48 ~~~~~~~~~~Q~lDhF~~~~---~~~~Qq~~y~n~~~~--~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~ 122 (514)
T KOG2182|consen 48 PANVEQSTFTQKLDHFDSSN---GKFFQQRFYNNNQWA--KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVF 122 (514)
T ss_pred cccccccchhhhhhhhhcch---hhhhhhheeeccccc--cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeE
Confidence 35578999999999995443 577777777777774 46999999999999997 666667788999999999999
Q ss_pred EEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCC-CCEEEEccChhhHHHHHHHHhCCCe
Q 011907 128 FIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATD-SPVVVFGGSYGGMLAAWFRLKYPHV 206 (475)
Q Consensus 128 ~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~-~pwI~fGGSY~G~LAAW~R~kYP~l 206 (475)
.|||||||+|.|++++ +++||||||++|||+|+|+||+.++.+++..+ .|||+|||||+|+||||||+||||+
T Consensus 123 ~lEHRFYG~S~P~~~~------st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel 196 (514)
T KOG2182|consen 123 QLEHRFYGQSSPIGDL------STSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL 196 (514)
T ss_pred EeeeeccccCCCCCCC------cccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh
Confidence 9999999999999999 99999999999999999999999999987655 5999999999999999999999999
Q ss_pred eEEEEecccccccccCCcCchhhhHHHHHhhhcCChhhHHHHHHHHHHHHHHhcCCCcHHHHHHHhhhcCCC----ChHH
Q 011907 207 AIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICKSE----KNLA 282 (475)
Q Consensus 207 v~gavASSAPv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~g~~~Lk~~F~lc~~l----~~~d 282 (475)
+.|||||||||++ .+||+||.++|+++++..+++|.++|+++|..|++++.+.+||++||++|+||+++ ++.|
T Consensus 197 ~~GsvASSapv~A---~~DF~EY~~VVe~s~~~~~~~C~~ai~~~f~~~~~l~~t~~gr~~Lk~~Fnl~~~f~~~~s~~d 273 (514)
T KOG2182|consen 197 TVGSVASSAPVLA---KVDFYEYLMVVEESLRRYSPECADAIKEGFKSMEELLLTKGGRQALKSLFNLCPPFDNNVSDTD 273 (514)
T ss_pred heeecccccceeE---EecHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccCCccccchhHHH
Confidence 9999999999986 57999999999999999999999999999999999999988999999999999988 3456
Q ss_pred HHHHHHHhhh-hhhhccCCCCCCCCCCCCCCcHHHHhhhccCCCCCchHHHHHHHHhhhhhcccCCcccccCCCC-----
Q 011907 283 IESWLSTAFV-YTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSGTAKCFDLNGD----- 356 (475)
Q Consensus 283 ~~~~l~~~~~-~~~~~~y~~~~~~~~~~p~~~v~~~C~~i~~~~~~~~~~~~l~~~~~~~~n~~~~~~C~d~~~~----- 356 (475)
..+|+++++. +..++||..+.+ -.....+.|.++|+.|.+. .+.|.+.++.+.++.+.+.-+ ..|.+.++.
T Consensus 274 ~~~ff~nv~~~FqgvvQY~gd~~-~~~~~~~~i~~~C~~l~n~-t~~d~v~~~~~~~~~~~~~~~-~~c~~~~Y~~~i~~ 350 (514)
T KOG2182|consen 274 QHNFFSNVYSNFQGVVQYSGDNS-NATASGLGIPAMCDILNNK-TPGDDVVAVNKYMNWFNNGFG-YGCLDNTYNGMISY 350 (514)
T ss_pred HHHHHHHHHHhhhhheeecCCCC-cccccccChhHHHHHhhcC-CCCchHHHHHHHHHHHHhccC-CCcCCccHHHHHHH
Confidence 7888887766 445555554441 1122346799999999884 445668888888888776655 578876541
Q ss_pred ----CCC----CCCCcceeeeecccccccCCCCCCCCCcCCCCChHHHHHHHHhhhC-------CCCChhHHHHhhCC-C
Q 011907 357 ----SDP----HGLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYG-------VDPRPNWITTEFGG-H 420 (475)
Q Consensus 357 ----~~~----~~~r~W~wQtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~FG-------i~~~~~~~n~~yGG-~ 420 (475)
+.+ .++|+|.||||||||||||+++.+++|+ +.+++++|+++|+++|| +.+.++.+|.+||| .
T Consensus 351 ~~n~~~~~~~~~a~r~W~wQtCtEfG~yQttds~~~iFg-s~vp~~~fid~C~dlFG~~y~~~~i~~~V~~TN~~YGG~~ 429 (514)
T KOG2182|consen 351 LKNSTEPGEDAAADRLWTWQTCTEFGYYQTTDSGNSIFG-STVPLDYFIDLCMDLFGAEYTAKGIDPNVDQTNYKYGGRD 429 (514)
T ss_pred hhcccCcCcccccchhhhhhhcccceeeEecCCCCcccc-CCCChHHHHHHHHHHhCchhhhhHHHHHHHHhhhhcCccc
Confidence 122 3469999999999999999999999997 47999999999999999 34567789999999 4
Q ss_pred CccccccCCCCeEEEECCCCCCCCCCCcccCCccccccccccceeeeeeeecccC
Q 011907 421 KIGLVLKRFASNIIFFNGLRDPWSGGGYDLYPFAIQTSLSVEKIFITFCICICFH 475 (475)
Q Consensus 421 ~~~~~~~~~~snIiFsNG~~DPW~~~gv~~~p~~~~~~~~~~~~~~~~~~~~~~~ 475 (475)
+++ ++||||+||++||||++|... +...=++.++|-||.|
T Consensus 430 ~~~------atnVvf~NG~~DPWh~LG~~~---------st~~~~~~~li~gtsH 469 (514)
T KOG2182|consen 430 NYN------ATNVVFPNGSLDPWHALGLQN---------STDSSVVSILINGTSH 469 (514)
T ss_pred ccC------cceEEecCCCCCchhhhcccc---------CCCCCceEEEecCCcc
Confidence 554 799999999999999999865 1122234566667666
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=99.96 E-value=3.7e-28 Score=247.26 Aligned_cols=168 Identities=24% Similarity=0.304 Sum_probs=137.5
Q ss_pred eeeEEecCCCCCCCCCCCCeeeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeee
Q 011907 55 TKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYY 134 (475)
Q Consensus 55 ~~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyY 134 (475)
..+|+|||||-+++. +||+||..+..+-. ..|.+|++.|-+-.. +.. ..|+.+-++|..|.+|||||
T Consensus 33 vl~y~QPvDH~~P~~---gtF~QRvtLlHk~~-----drPtV~~T~GY~~~~----~p~-r~Ept~Lld~NQl~vEhRfF 99 (448)
T PF05576_consen 33 VLRYTQPVDHRHPEK---GTFQQRVTLLHKDF-----DRPTVLYTEGYNVST----SPR-RSEPTQLLDGNQLSVEHRFF 99 (448)
T ss_pred EEeeecCCCCCCCCC---CceEEEEEEEEcCC-----CCCeEEEecCccccc----Ccc-ccchhHhhccceEEEEEeec
Confidence 347899999999876 49999999987654 689999999987521 111 34899999999999999999
Q ss_pred ecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecc
Q 011907 135 GKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASS 214 (475)
Q Consensus 135 G~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASS 214 (475)
|.|+|-+ .+++|||++||.+|..+.++.+|.-|. .+||..|||-|||-|...|..||+-++|+||-.
T Consensus 100 ~~SrP~p----------~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 100 GPSRPEP----------ADWSYLTIWQAASDQHRIVQAFKPIYP---GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred cCCCCCC----------CCcccccHhHhhHHHHHHHHHHHhhcc---CCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 9999955 378999999999999999999998875 489999999999999999999999999999999
Q ss_pred cccccccCCcC--chhhhHHHHHhhhcCChhhHHHHHHHHHHH
Q 011907 215 APILNFDNIVS--PYSFSNIITQDFRSVSENCYKVIKGSWKQI 255 (475)
Q Consensus 215 APv~a~~~~~d--f~~y~~~V~~~~~~~~~~C~~~i~~a~~~i 255 (475)
||.... +..| +..|.+.| +.++|.++|++.-.++
T Consensus 167 AP~~~~-~~eD~~y~~Fl~~V------Gt~eCR~~l~~~Qre~ 202 (448)
T PF05576_consen 167 APNDVV-NREDSRYDRFLEKV------GTAECRDKLNDFQREA 202 (448)
T ss_pred cccccC-cccchhHHHHHHhc------CCHHHHHHHHHHHHHH
Confidence 997421 2223 22344433 5678999998766544
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.46 E-value=1.1e-06 Score=89.43 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=78.2
Q ss_pred EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHh
Q 011907 95 IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLK 174 (475)
Q Consensus 95 Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k 174 (475)
|+|.-|.-.+..+.. ..+...|++ .|-.|+++++|-||+|.+.... .-+.++.+.|+..+++.++
T Consensus 62 VvllHG~~~~~~~~~--~~~~~~L~~-~Gy~V~~~D~rGhG~S~~~~~~------------~~~~~~~~~D~~~~i~~l~ 126 (330)
T PLN02298 62 IFMVHGYGNDISWTF--QSTAIFLAQ-MGFACFALDLEGHGRSEGLRAY------------VPNVDLVVEDCLSFFNSVK 126 (330)
T ss_pred EEEEcCCCCCcceeh--hHHHHHHHh-CCCEEEEecCCCCCCCCCcccc------------CCCHHHHHHHHHHHHHHHH
Confidence 555566532332211 122334543 4789999999999998532110 2357788999999999998
Q ss_pred hhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 175 KNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 175 ~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
......+.|++++|.|.||++|.++-.++|+.+.|.+..+++.
T Consensus 127 ~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 127 QREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred hcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 7544445689999999999999999999999999999887665
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.34 E-value=3.5e-06 Score=86.64 Aligned_cols=88 Identities=24% Similarity=0.237 Sum_probs=68.5
Q ss_pred hhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCC-CChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhh
Q 011907 115 MYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGY-LSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGG 193 (475)
Q Consensus 115 ~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~y-Lts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G 193 (475)
...|++ .|-.|+++++|-||+|.... .| .+.++.+.|+..++..++.+...+..|++++|.|+||
T Consensus 108 ~~~l~~-~g~~v~~~D~~G~G~S~~~~-------------~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG 173 (349)
T PLN02385 108 ARKIAS-SGYGVFAMDYPGFGLSEGLH-------------GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGG 173 (349)
T ss_pred HHHHHh-CCCEEEEecCCCCCCCCCCC-------------CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccch
Confidence 334554 48899999999999985311 12 3567788999999988876543345689999999999
Q ss_pred HHHHHHHHhCCCeeEEEEecccc
Q 011907 194 MLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 194 ~LAAW~R~kYP~lv~gavASSAP 216 (475)
++|..+-.+||+.+.|.+..++.
T Consensus 174 ~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 174 AVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHHHHHhCcchhhheeEeccc
Confidence 99999999999999988887643
No 7
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.23 E-value=5.1e-06 Score=80.12 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=78.3
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||++..|+-+...... ..+..+.++.|--||.+++|-+|+|.+.... -++.+.++..+|+..+++
T Consensus 25 ~~~vl~~hG~~g~~~~~~---~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~----------~~~~~~~~~~~~~~~~~~ 91 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYL---ENLRELLKEEGREVIMYDQLGCGYSDQPDDS----------DELWTIDYFVDELEEVRE 91 (288)
T ss_pred CCeEEEEcCCCCccHHHH---HHHHHHHHhcCCEEEEEcCCCCCCCCCCCcc----------cccccHHHHHHHHHHHHH
Confidence 467888888755432221 1244555666899999999999998753221 125788888899888776
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
.++. .+++++|+|+||.+|.++-.++|+.+.+.+..+++
T Consensus 92 ~~~~------~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 92 KLGL------DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred HcCC------CcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 5542 36999999999999999999999999888876644
No 8
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.21 E-value=7.6e-06 Score=75.38 Aligned_cols=101 Identities=24% Similarity=0.265 Sum_probs=78.0
Q ss_pred EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHh
Q 011907 95 IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLK 174 (475)
Q Consensus 95 Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k 174 (475)
|+|.-|.-++...+. .++..++ -|-.|++++.|-+|.|.+..+ ....+.++..+|+..+++.+.
T Consensus 1 vv~~hG~~~~~~~~~---~~~~~l~--~~~~v~~~d~~G~G~s~~~~~-----------~~~~~~~~~~~~l~~~l~~~~ 64 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD---PLAEALA--RGYRVIAFDLPGHGRSDPPPD-----------YSPYSIEDYAEDLAELLDALG 64 (228)
T ss_dssp EEEE-STTTTGGGGH---HHHHHHH--TTSEEEEEECTTSTTSSSHSS-----------GSGGSHHHHHHHHHHHHHHTT
T ss_pred eEEECCCCCCHHHHH---HHHHHHh--CCCEEEEEecCCccccccccc-----------cCCcchhhhhhhhhhcccccc
Confidence 566667666554332 2445564 388999999999999876332 235677888999999987766
Q ss_pred hhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 175 KNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 175 ~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
. .|++++|+|+||+++..+-.++|+.+.+.+..+++.
T Consensus 65 ~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 65 I------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPP 101 (228)
T ss_dssp T------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred c------ccccccccccccccccccccccccccccceeecccc
Confidence 5 489999999999999999999999999999888776
No 9
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.19 E-value=6.9e-06 Score=78.54 Aligned_cols=118 Identities=20% Similarity=0.206 Sum_probs=81.4
Q ss_pred CCcEEEE-eCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVY-TGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly-~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
..|++++ .|+-+..+......+ +..+|++.|..||+.++|.+|.+...-+. + ....... .....+|+..++
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~----~-~~~~~~~--~~~~~~~~~~~i 83 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDW----F-FTHHRAR--GTGEVESLHQLI 83 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCC----C-CccccCC--CCccHHHHHHHH
Confidence 3565554 554444333222223 56788999999999999988754431111 0 0000000 124578888999
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+++++++.....+++++|.|.||.+|..+-.+||+++.|+++-|++.
T Consensus 84 ~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 84 DAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 99988876666799999999999999999999999999998888876
No 10
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.18 E-value=5.6e-06 Score=83.46 Aligned_cols=104 Identities=23% Similarity=0.231 Sum_probs=74.5
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||+|..|+.+..... .+.......+--||++++|-||.|.+-... . -.+.++..+|+..+++
T Consensus 27 ~~~lvllHG~~~~~~~~-----~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~------~-----~~~~~~~~~dl~~l~~ 90 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-----GCRRFFDPETYRIVLFDQRGCGKSTPHACL------E-----ENTTWDLVADIEKLRE 90 (306)
T ss_pred CCEEEEECCCCCCCCCH-----HHHhccCccCCEEEEECCCCCCCCCCCCCc------c-----cCCHHHHHHHHHHHHH
Confidence 56799999987654321 111112224578999999999999753221 0 1356778888888876
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+++. .+++++|+||||+++..+-.+||+.+.+.+..++++
T Consensus 91 ~l~~------~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 91 KLGI------KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HcCC------CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 6542 379999999999999999999999988877766544
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.16 E-value=1.8e-05 Score=79.33 Aligned_cols=77 Identities=10% Similarity=0.092 Sum_probs=60.7
Q ss_pred CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh
Q 011907 123 KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 123 gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k 202 (475)
|--||++.+|-||+|.+.+.. .-.+.++..+|++.+++++.. .|++++|+|+||++|..+-.+
T Consensus 73 gy~vi~~Dl~G~G~S~~~~~~-----------~~~~~~~~a~~l~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 73 GHRVIAPDLIGFGRSDKPTRR-----------EDYTYARHVEWMRSWFEQLDL------TDVTLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred CCEEEEECCCCCCCCCCCCCc-----------ccCCHHHHHHHHHHHHHHcCC------CCEEEEEEChHHHHHHHHHHh
Confidence 679999999999999753321 123567777888888765432 379999999999999999999
Q ss_pred CCCeeEEEEecccc
Q 011907 203 YPHVAIGALASSAP 216 (475)
Q Consensus 203 YP~lv~gavASSAP 216 (475)
||+.+.+.+.-++.
T Consensus 136 ~p~~v~~lvl~~~~ 149 (302)
T PRK00870 136 HPDRFARLVVANTG 149 (302)
T ss_pred ChhheeEEEEeCCC
Confidence 99999998876543
No 12
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.11 E-value=6.5e-06 Score=77.36 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=74.3
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.|+++++.|=+.-...+ ..+...+++ |-.|+.+++|-+|+|.+. . ...+.++-.+|+..+++
T Consensus 12 ~~~~li~~hg~~~~~~~~--~~~~~~l~~--~~~v~~~d~~G~G~s~~~-~------------~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW--DPVLPALTP--DFRVLRYDKRGHGLSDAP-E------------GPYSIEDLADDVLALLD 74 (251)
T ss_pred CCCeEEEEcCcccchhhH--HHHHHHhhc--ccEEEEecCCCCCCCCCC-C------------CCCCHHHHHHHHHHHHH
Confidence 578777776654332222 123334443 679999999999998431 1 13478888888888887
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
.++. .+++++|+|+||++|..+-.++|+.+.+.+..+++.
T Consensus 75 ~~~~------~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 75 HLGI------ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred HhCC------CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 6642 379999999999999999999999999888776554
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=98.08 E-value=2.4e-05 Score=79.89 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=67.4
Q ss_pred hcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 121 KFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 121 ~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+.|..|+++.+|-+|.|-+..+ ....-...+.+..++|+..+++.+.... +..|++++|.|+||++|.-+-
T Consensus 79 ~~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a 149 (330)
T PRK10749 79 HLGYDVLIIDHRGQGRSGRLLD-------DPHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFL 149 (330)
T ss_pred HCCCeEEEEcCCCCCCCCCCCC-------CCCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHH
Confidence 4688999999999999964221 0011112477899999999998875443 246899999999999999999
Q ss_pred HhCCCeeEEEEeccccc
Q 011907 201 LKYPHVAIGALASSAPI 217 (475)
Q Consensus 201 ~kYP~lv~gavASSAPv 217 (475)
.++|+.+.+.+..+.+.
T Consensus 150 ~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 150 QRHPGVFDAIALCAPMF 166 (330)
T ss_pred HhCCCCcceEEEECchh
Confidence 99999999988776543
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.03 E-value=2.5e-05 Score=77.73 Aligned_cols=109 Identities=15% Similarity=0.177 Sum_probs=80.0
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+-||+|..|.-++...+. -.+..++++ +-||++..|-||.|.+.... ..+.-...+.++-.+|++.|++
T Consensus 29 ~~~vlllHG~~~~~~~w~---~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~------~~~~~~~~~~~~~a~~l~~~l~ 97 (294)
T PLN02824 29 GPALVLVHGFGGNADHWR---KNTPVLAKS--HRVYAIDLLGYGYSDKPNPR------SAPPNSFYTFETWGEQLNDFCS 97 (294)
T ss_pred CCeEEEECCCCCChhHHH---HHHHHHHhC--CeEEEEcCCCCCCCCCCccc------cccccccCCHHHHHHHHHHHHH
Confidence 446666667555443221 234567766 38999999999999753321 1112246788888899999998
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+++. .|++++|.|.||++|.-+-.+||+.+.+.+.-+++.
T Consensus 98 ~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 98 DVVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HhcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 7653 389999999999999999999999999988876654
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.98 E-value=2.8e-05 Score=75.51 Aligned_cols=84 Identities=19% Similarity=0.063 Sum_probs=63.4
Q ss_pred hhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhh
Q 011907 114 FMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGG 193 (475)
Q Consensus 114 ~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G 193 (475)
++..|++. ..|+.+++|.+|.|.+-... -.|.+...+|++.+++.+. ..|++++|.|+||
T Consensus 47 ~~~~l~~~--~~vi~~D~~G~G~S~~~~~~------------~~~~~~~~~~l~~~i~~~~------~~~~~lvG~S~Gg 106 (278)
T TIGR03056 47 LMPPLARS--FRVVAPDLPGHGFTRAPFRF------------RFTLPSMAEDLSALCAAEG------LSPDGVIGHSAGA 106 (278)
T ss_pred HHHHHhhC--cEEEeecCCCCCCCCCcccc------------CCCHHHHHHHHHHHHHHcC------CCCceEEEECccH
Confidence 34566664 68999999999998753221 2367777788888876532 2478999999999
Q ss_pred HHHHHHHHhCCCeeEEEEeccccc
Q 011907 194 MLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 194 ~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++|+.+-.++|+.+.+.++-+++.
T Consensus 107 ~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 107 AIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred HHHHHHHHhCCcccceEEEEcCcc
Confidence 999999999999887777665544
No 16
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.96 E-value=3.8e-05 Score=75.83 Aligned_cols=115 Identities=18% Similarity=0.243 Sum_probs=79.6
Q ss_pred eeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCC
Q 011907 75 FQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTT 154 (475)
Q Consensus 75 F~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL 154 (475)
.+.||++. ++.....||+|.-|--++...+ ...+..+++ +.-||++++|-||+|.. ++.
T Consensus 12 ~~~~~~~~----~~~~~~~plvllHG~~~~~~~w---~~~~~~L~~--~~~vi~~Dl~G~G~S~~-~~~----------- 70 (276)
T TIGR02240 12 QSIRTAVR----PGKEGLTPLLIFNGIGANLELV---FPFIEALDP--DLEVIAFDVPGVGGSST-PRH----------- 70 (276)
T ss_pred cEEEEEEe----cCCCCCCcEEEEeCCCcchHHH---HHHHHHhcc--CceEEEECCCCCCCCCC-CCC-----------
Confidence 35677663 2211135888888855444322 123344555 36999999999999953 111
Q ss_pred CCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 155 GYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 155 ~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
-.+.+.-.+|+..|+.+++. .|++++|.|+||++|..+-.++|+.+.+-+.-+++.
T Consensus 71 -~~~~~~~~~~~~~~i~~l~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 71 -PYRFPGLAKLAARMLDYLDY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred -cCcHHHHHHHHHHHHHHhCc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 13556666788888877642 379999999999999999999999999988777665
No 17
>PHA02857 monoglyceride lipase; Provisional
Probab=97.94 E-value=6.8e-05 Score=73.75 Aligned_cols=107 Identities=14% Similarity=0.184 Sum_probs=74.1
Q ss_pred CcEEEE-eCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 93 APIFVY-TGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 93 gPIfly-~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
.||+|+ -|.-+....+ . -+...+++ .|-.++++.+|-||.|.+.. . + .-+..+-+.|+..++.
T Consensus 25 ~~~v~llHG~~~~~~~~-~--~~~~~l~~-~g~~via~D~~G~G~S~~~~-~------~-----~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 25 KALVFISHGAGEHSGRY-E--ELAENISS-LGILVFSHDHIGHGRSNGEK-M------M-----IDDFGVYVRDVVQHVV 88 (276)
T ss_pred CEEEEEeCCCccccchH-H--HHHHHHHh-CCCEEEEccCCCCCCCCCcc-C------C-----cCCHHHHHHHHHHHHH
Confidence 355555 6643332222 1 12334444 37899999999999996521 1 1 1244455778877777
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
.++..+ +..|++++|+|+||++|..+-.++|+.+.|.+..++++
T Consensus 89 ~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 89 TIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred HHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 766543 35689999999999999999999999999998888665
No 18
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.93 E-value=4.2e-05 Score=71.52 Aligned_cols=101 Identities=21% Similarity=0.235 Sum_probs=69.0
Q ss_pred cEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHH-HHHHHHH
Q 011907 94 PIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALAD-YASLIID 172 (475)
Q Consensus 94 PIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD-~a~Fi~~ 172 (475)
||++.-|.-+....+ ..+...|+ .|..|+.+++|.||.|.... .....+.++++.| +..+++.
T Consensus 3 ~vv~~hG~~~~~~~~---~~~~~~L~--~~~~v~~~d~~g~G~s~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 66 (251)
T TIGR03695 3 VLVFLHGFLGSGADW---QALIELLG--PHFRCLAIDLPGHGSSQSPD-----------EIERYDFEEAAQDILATLLDQ 66 (251)
T ss_pred EEEEEcCCCCchhhH---HHHHHHhc--ccCeEEEEcCCCCCCCCCCC-----------ccChhhHHHHHHHHHHHHHHH
Confidence 455555544333221 12233444 47899999999999984311 2235667777777 5555544
Q ss_pred HhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 173 LKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 173 ~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
+. ..|++++|+|+||++|..+-.++|+.+.+.+.-+++
T Consensus 67 ~~------~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 67 LG------IEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred cC------CCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 32 348999999999999999999999999888876654
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.87 E-value=4.4e-05 Score=74.90 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=67.2
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||+|..|.-++...+...-..+..+++ .|.-||++++|-+|.|.+.... . .. +... .+|+..+++
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~------~--~~---~~~~-~~~l~~~l~ 96 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMD------E--QR---GLVN-ARAVKGLMD 96 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCc------c--cc---cchh-HHHHHHHHH
Confidence 44677766643333211100001223333 4789999999999999753210 0 00 1111 366777776
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
.+.. .+++++|+|+||++|..+-.+||+.+.+.+.-+++
T Consensus 97 ~l~~------~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 97 ALDI------EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred HcCC------CCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 6532 38999999999999999999999999888876543
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.86 E-value=4.1e-05 Score=72.77 Aligned_cols=101 Identities=21% Similarity=0.269 Sum_probs=71.0
Q ss_pred CCc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
++| |+|..|.-+....+. ..+..+++ +..++++++|-+|.|..-.. .-.+.++..+|+..++
T Consensus 12 ~~~~iv~lhG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~~------------~~~~~~~~~~~~~~~i 74 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWA---PQLDVLTQ--RFHVVTYDHRGTGRSPGELP------------PGYSIAHMADDVLQLL 74 (257)
T ss_pred CCCEEEEEcCCCcchhHHH---HHHHHHHh--ccEEEEEcCCCCCCCCCCCc------------ccCCHHHHHHHHHHHH
Confidence 455 555556544433221 12333443 57999999999999863211 1247788899999998
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
+.++. .|++++|.|+||++|..+..++|+.+.+.+.-++
T Consensus 75 ~~~~~------~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 75 DALNI------ERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred HHhCC------CcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 77642 3799999999999999999999998877776544
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.85 E-value=7.1e-05 Score=72.20 Aligned_cols=102 Identities=20% Similarity=0.206 Sum_probs=74.4
Q ss_pred CCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 91 NNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 91 ~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
.+.||+|..|.-++...+ ..+...+++. --||+++.|.+|+|.+.. -+|.++-.+|+..++
T Consensus 15 ~~~~iv~lhG~~~~~~~~---~~~~~~l~~~--~~vi~~D~~G~G~s~~~~--------------~~~~~~~~~d~~~~l 75 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNL---GVLARDLVND--HDIIQVDMRNHGLSPRDP--------------VMNYPAMAQDLLDTL 75 (255)
T ss_pred CCCCEEEECCCCCchhHH---HHHHHHHhhC--CeEEEECCCCCCCCCCCC--------------CCCHHHHHHHHHHHH
Confidence 345788888876654321 1234455554 599999999999997522 146778788999988
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEec-cccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALAS-SAPI 217 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavAS-SAPv 217 (475)
..++. .+++++|.|.||++|.-+-.++|+.+.+.+.- ++|.
T Consensus 76 ~~l~~------~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~ 117 (255)
T PRK10673 76 DALQI------EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPV 117 (255)
T ss_pred HHcCC------CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCC
Confidence 77532 37999999999999999999999998886664 3443
No 22
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.82 E-value=5.2e-05 Score=71.05 Aligned_cols=77 Identities=25% Similarity=0.303 Sum_probs=59.7
Q ss_pred eEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCC
Q 011907 125 LLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYP 204 (475)
Q Consensus 125 ~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP 204 (475)
-||.+-.|-+|.|.|-... .+...+.+...+|+..+++.+.. .+++++|+||||+++..+-.+||
T Consensus 2 ~vi~~d~rG~g~S~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~------~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 2 DVILFDLRGFGYSSPHWDP---------DFPDYTTDDLAADLEALREALGI------KKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEECTTSTTSSSCCGS---------GSCTHCHHHHHHHHHHHHHHHTT------SSEEEEEETHHHHHHHHHHHHSG
T ss_pred EEEEEeCCCCCCCCCCccC---------CcccccHHHHHHHHHHHHHHhCC------CCeEEEEECCChHHHHHHHHHCc
Confidence 3789999999999972111 23466666666776666654443 25999999999999999999999
Q ss_pred CeeEEEEecccc
Q 011907 205 HVAIGALASSAP 216 (475)
Q Consensus 205 ~lv~gavASSAP 216 (475)
+.+.+.+..++|
T Consensus 67 ~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 ERVKKLVLISPP 78 (230)
T ss_dssp GGEEEEEEESES
T ss_pred hhhcCcEEEeee
Confidence 999999988886
No 23
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.80 E-value=9.2e-05 Score=76.02 Aligned_cols=87 Identities=17% Similarity=0.122 Sum_probs=65.5
Q ss_pred hcCceEEEEeeeeeecCccCCCCccccccCCCCCCC-CChhhHHHHHHHHHHHHhhhC-----------------CCC-C
Q 011907 121 KFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGY-LSSTQALADYASLIIDLKKNL-----------------TAT-D 181 (475)
Q Consensus 121 ~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~y-Lts~QALaD~a~Fi~~~k~~~-----------------~~~-~ 181 (475)
+.|-.|++++||-.|+|.-... ...+ -+.++.++|+..+++.++++. ..+ +
T Consensus 72 ~~G~~V~~~D~rGHG~S~~~~~----------~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (332)
T TIGR01607 72 KNGYSVYGLDLQGHGESDGLQN----------LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENR 141 (332)
T ss_pred HCCCcEEEecccccCCCccccc----------cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCC
Confidence 3488999999999999863211 1122 367888999999999887631 112 5
Q ss_pred CCEEEEccChhhHHHHHHHHhCCC--------eeEEEEeccccc
Q 011907 182 SPVVVFGGSYGGMLAAWFRLKYPH--------VAIGALASSAPI 217 (475)
Q Consensus 182 ~pwI~fGGSY~G~LAAW~R~kYP~--------lv~gavASSAPv 217 (475)
.|++++|+|.||+++.-+-+++|+ .+.|++.+|+++
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred CceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 799999999999999988777764 577888778776
No 24
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.80 E-value=9.4e-05 Score=73.68 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=77.2
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||+|+.|.-+....+ ..++..|++++ -||++..|-||.|.+... .| +.+...+|+..+++
T Consensus 27 g~~vvllHG~~~~~~~w---~~~~~~L~~~~--~via~D~~G~G~S~~~~~------------~~-~~~~~a~dl~~ll~ 88 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLW---RNIIPHLAGLG--RCLAPDLIGMGASDKPDI------------DY-TFADHARYLDAWFD 88 (295)
T ss_pred CCEEEEECCCCCCHHHH---HHHHHHHhhCC--EEEEEcCCCCCCCCCCCC------------CC-CHHHHHHHHHHHHH
Confidence 45788887765544322 13455777764 999999999999854221 13 66677788888888
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+++. .|++++|.|.||.+|.-+-.+||+.+.+.+.-++++
T Consensus 89 ~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 89 ALGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HhCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 7643 489999999999999999999999999988877654
No 25
>PRK10566 esterase; Provisional
Probab=97.78 E-value=0.00016 Score=70.05 Aligned_cols=111 Identities=18% Similarity=0.183 Sum_probs=70.6
Q ss_pred CCcEEEEeCCC-CCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCC--CChhhHHHHHHH
Q 011907 92 NAPIFVYTGNE-GDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGY--LSSTQALADYAS 168 (475)
Q Consensus 92 ~gPIfly~GgE-g~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~y--Lts~QALaD~a~ 168 (475)
..|+++++-|- ++...+ .-+...+++ .|-.++..++|.+|.|.+ ++ ....+.. =...++++|++.
T Consensus 26 ~~p~vv~~HG~~~~~~~~---~~~~~~l~~-~G~~v~~~d~~g~G~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVY---SYFAVALAQ-AGFRVIMPDAPMHGARFS-GD-------EARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred CCCEEEEeCCCCcccchH---HHHHHHHHh-CCCEEEEecCCcccccCC-Cc-------cccchhhHHHHHHHHHHHHHH
Confidence 35666665554 332211 112234444 488999999999998743 22 1112211 113467788888
Q ss_pred HHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEE-EEecc
Q 011907 169 LIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIG-ALASS 214 (475)
Q Consensus 169 Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~g-avASS 214 (475)
++..+++.......+++++|.|+||.+|.++-.++|++..+ ++.++
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 88887765333456899999999999999999999997654 34444
No 26
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.74 E-value=0.00019 Score=71.57 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=70.5
Q ss_pred CCCc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 91 NNAP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 91 ~~gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
+++| |+|.-|.-++.. .+. .+...|++ .|-.++.+++|-+|+|.+.+. ...|.++..+|+..+
T Consensus 16 ~~~p~vvliHG~~~~~~-~w~--~~~~~L~~-~g~~vi~~dl~g~G~s~~~~~------------~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 16 RQPPHFVLIHGISGGSW-CWY--KIRCLMEN-SGYKVTCIDLKSAGIDQSDAD------------SVTTFDEYNKPLIDF 79 (273)
T ss_pred CCCCeEEEECCCCCCcC-cHH--HHHHHHHh-CCCEEEEecccCCCCCCCCcc------------cCCCHHHHHHHHHHH
Confidence 3566 555555433322 111 12223333 367999999999998754222 236677777787777
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
++.+.. ..+++++|+||||+++..+-.+||+.+.+.+.-++.
T Consensus 80 i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 80 LSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred HHhcCC-----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 765431 258999999999999999999999998887776553
No 27
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.74 E-value=0.00016 Score=76.39 Aligned_cols=113 Identities=17% Similarity=0.230 Sum_probs=68.4
Q ss_pred cccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHH
Q 011907 84 THWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQAL 163 (475)
Q Consensus 84 ~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QAL 163 (475)
-+|.+.+.+.||+|+-|.-+....+.. .+..+++. -.|+++++|-+|.|... +. .+-+.+++.
T Consensus 97 ~~~~~~~~~p~vvllHG~~~~~~~~~~---~~~~L~~~--~~vi~~D~rG~G~S~~~-~~-----------~~~~~~~~~ 159 (402)
T PLN02894 97 VTFDSKEDAPTLVMVHGYGASQGFFFR---NFDALASR--FRVIAIDQLGWGGSSRP-DF-----------TCKSTEETE 159 (402)
T ss_pred EEecCCCCCCEEEEECCCCcchhHHHH---HHHHHHhC--CEEEEECCCCCCCCCCC-Cc-----------ccccHHHHH
Confidence 345433223446556665333332211 23456654 67999999999998531 11 123345554
Q ss_pred HHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 164 ADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 164 aD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
++++.-+..+...+. ..|++++|+|+||.+|..+-.+||+.+.+.+..+.
T Consensus 160 ~~~~~~i~~~~~~l~--~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p 209 (402)
T PLN02894 160 AWFIDSFEEWRKAKN--LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGP 209 (402)
T ss_pred HHHHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECC
Confidence 443333322222222 24899999999999999999999999988776643
No 28
>PLN02511 hydrolase
Probab=97.68 E-value=0.00021 Score=75.07 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=78.0
Q ss_pred CCCc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 91 NNAP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 91 ~~gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
.++| |+|.-|.+|.....+. .. +...+.+.|--+|++.+|-+|.|..... ++. ...-.+|+..+
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~-~~-~~~~~~~~g~~vv~~d~rG~G~s~~~~~------------~~~-~~~~~~Dl~~~ 162 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYV-RH-MLLRARSKGWRVVVFNSRGCADSPVTTP------------QFY-SASFTGDLRQV 162 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHH-HH-HHHHHHHCCCEEEEEecCCCCCCCCCCc------------CEE-cCCchHHHHHH
Confidence 3566 5555677775432111 11 2233446788999999999999864321 111 13445799999
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCe--eEEEEeccccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHV--AIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~l--v~gavASSAPv 217 (475)
+++++..+ ++.|++++|.|.||++++.+-.++|+. +.|+++=|+|.
T Consensus 163 i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 163 VDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred HHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 99998865 356999999999999999999999987 78888778776
No 29
>PLN02965 Probable pheophorbidase
Probab=97.66 E-value=0.00025 Score=69.28 Aligned_cols=104 Identities=17% Similarity=0.046 Sum_probs=71.1
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
...|+|.-|.-.+... + ...+..|+ +-+--|+++.+|.+|+|-...+ ...|.++-.+|+..++.
T Consensus 3 ~~~vvllHG~~~~~~~-w--~~~~~~L~-~~~~~via~Dl~G~G~S~~~~~------------~~~~~~~~a~dl~~~l~ 66 (255)
T PLN02965 3 EIHFVFVHGASHGAWC-W--YKLATLLD-AAGFKSTCVDLTGAGISLTDSN------------TVSSSDQYNRPLFALLS 66 (255)
T ss_pred ceEEEEECCCCCCcCc-H--HHHHHHHh-hCCceEEEecCCcCCCCCCCcc------------ccCCHHHHHHHHHHHHH
Confidence 3457777775544322 1 12233443 2356899999999999842111 13556777788888887
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
.+.. ..|++++|+|+||+++..+-.+||+.+.+.+.-++.
T Consensus 67 ~l~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 67 DLPP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred hcCC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 6431 148999999999999999999999999887764443
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.61 E-value=0.00023 Score=75.03 Aligned_cols=85 Identities=19% Similarity=0.260 Sum_probs=64.5
Q ss_pred hchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCC-ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhH
Q 011907 116 YDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYL-SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGM 194 (475)
Q Consensus 116 ~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yL-ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~ 194 (475)
..+++ .|..|+++.||-||.|..-. .|. +.++..+|+..+++.++.+. ++.|++++|+|+||.
T Consensus 157 ~~L~~-~Gy~V~~~D~rGhG~S~~~~-------------~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ 220 (395)
T PLN02652 157 KQLTS-CGFGVYAMDWIGHGGSDGLH-------------GYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGA 220 (395)
T ss_pred HHHHH-CCCEEEEeCCCCCCCCCCCC-------------CCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHH
Confidence 34443 47899999999999985311 132 55788899999999998764 346899999999999
Q ss_pred HHHHHHHhCCC---eeEEEEeccccc
Q 011907 195 LAAWFRLKYPH---VAIGALASSAPI 217 (475)
Q Consensus 195 LAAW~R~kYP~---lv~gavASSAPv 217 (475)
+|..+- .+|+ .+.|.+..|+.+
T Consensus 221 ial~~a-~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 221 VVLKAA-SYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHH-hccCcccccceEEEECccc
Confidence 998764 5775 788888876544
No 31
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.58 E-value=0.00028 Score=74.09 Aligned_cols=105 Identities=12% Similarity=0.079 Sum_probs=76.5
Q ss_pred CcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIID 172 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~ 172 (475)
.||+|.-|.-+....+. ..+..|++ +..||+++.|-||.|-+-... ...-.|.++...|+..|++.
T Consensus 128 ~~ivllHG~~~~~~~w~---~~~~~L~~--~~~Via~DlpG~G~S~~p~~~---------~~~~ys~~~~a~~l~~~i~~ 193 (383)
T PLN03084 128 PPVLLIHGFPSQAYSYR---KVLPVLSK--NYHAIAFDWLGFGFSDKPQPG---------YGFNYTLDEYVSSLESLIDE 193 (383)
T ss_pred CeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCCccc---------ccccCCHHHHHHHHHHHHHH
Confidence 34666666544433221 23445665 579999999999998642210 01124788888999999987
Q ss_pred HhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 173 LKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 173 ~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++. .+++++|+|+||++|..+-.+||+.+.+.+..++|.
T Consensus 194 l~~------~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 194 LKS------DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred hCC------CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 653 379999999999999999999999999999988775
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.57 E-value=0.00037 Score=66.73 Aligned_cols=99 Identities=14% Similarity=0.065 Sum_probs=68.5
Q ss_pred Cc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 93 AP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 93 gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+| |+|..|.-++... +. -....++ +--|++++.|-||.|.+-.. . +.++..+|+..+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~--~~~~~l~---~~~vi~~D~~G~G~S~~~~~-------------~-~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQ--PVGEALP---DYPRLYIDLPGHGGSAAISV-------------D-GFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCChHH-HH--HHHHHcC---CCCEEEecCCCCCCCCCccc-------------c-CHHHHHHHHHHHHH
Confidence 45 6666665544322 21 1222332 57999999999999864111 1 56777788888887
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCe-eEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHV-AIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~l-v~gavASSAPv 217 (475)
++. ..|++++|.|+||.+|..+-.+||+- +.+.+..+++.
T Consensus 62 ~~~------~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 62 SYN------ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HcC------CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 542 35999999999999999999999764 87777665543
No 33
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.52 E-value=0.00052 Score=69.02 Aligned_cols=85 Identities=27% Similarity=0.346 Sum_probs=70.3
Q ss_pred cCceEEEEeeeeeecCccCCCCccccccCCCCCCCCCh-hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 122 FKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSS-TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 122 ~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts-~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
.|-.|+++.||-+|.|. .+ . .|... +-..+|+-.|.+.++.+-..++-|..++|.|.||+++--+.
T Consensus 81 ~g~~v~a~D~~GhG~Sd---Gl------~----~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~ 147 (313)
T KOG1455|consen 81 SGFAVYAIDYEGHGRSD---GL------H----AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIA 147 (313)
T ss_pred CCCeEEEeeccCCCcCC---CC------c----ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHH
Confidence 67899999999999996 22 1 24444 66788999999988877666778999999999999999999
Q ss_pred HhCCCeeEEEEecccccccc
Q 011907 201 LKYPHVAIGALASSAPILNF 220 (475)
Q Consensus 201 ~kYP~lv~gavASSAPv~a~ 220 (475)
.|.|+...|++. +||+...
T Consensus 148 ~k~p~~w~G~il-vaPmc~i 166 (313)
T KOG1455|consen 148 LKDPNFWDGAIL-VAPMCKI 166 (313)
T ss_pred hhCCccccccee-eeccccc
Confidence 999999999998 5576543
No 34
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.51 E-value=0.0005 Score=69.77 Aligned_cols=85 Identities=24% Similarity=0.297 Sum_probs=69.0
Q ss_pred hhhhcCceEEEEeeeeeecCcc--CCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHH
Q 011907 118 VAPKFKALLVFIEHRYYGKSIP--YGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGML 195 (475)
Q Consensus 118 lA~~~gA~vv~lEHRyYG~S~P--~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~L 195 (475)
.-.+-|-.|++++||-+|.|.. -+. .-+-++-+.|+..|++.++.. .++.|++++|+|.||.+
T Consensus 56 ~l~~~G~~V~~~D~RGhG~S~r~~rg~-------------~~~f~~~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~I 120 (298)
T COG2267 56 DLAARGFDVYALDLRGHGRSPRGQRGH-------------VDSFADYVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLI 120 (298)
T ss_pred HHHhCCCEEEEecCCCCCCCCCCCcCC-------------chhHHHHHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHH
Confidence 3445688999999999999973 222 112577889999999988865 34679999999999999
Q ss_pred HHHHHHhCCCeeEEEEecccccc
Q 011907 196 AAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 196 AAW~R~kYP~lv~gavASSAPv~ 218 (475)
|.-+-..+|+-+.|++.|| |..
T Consensus 121 a~~~~~~~~~~i~~~vLss-P~~ 142 (298)
T COG2267 121 ALLYLARYPPRIDGLVLSS-PAL 142 (298)
T ss_pred HHHHHHhCCccccEEEEEC-ccc
Confidence 9999999999999999977 543
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.47 E-value=0.00041 Score=71.21 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=69.1
Q ss_pred CCcEEEEeCCCCCccccc-----cccchhhchhh---hc---CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChh
Q 011907 92 NAPIFVYTGNEGDIEWFA-----QNTGFMYDVAP---KF---KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSST 160 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~-----~~~g~~~~lA~---~~---gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~ 160 (475)
+.|++|+.||-++-.... ++.+.+..+.. .+ +--||++.+|-+|.|.+. . | +.+
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-~-------------~-~~~ 121 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-P-------------I-DTA 121 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC-C-------------C-CHH
Confidence 569999999887654210 00111111111 11 467999999999987431 1 2 344
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 161 QALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
.-.+|++.|++.++. +.+++++|.|+||++|..+-.+||+.+.+.+.-++
T Consensus 122 ~~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s 171 (343)
T PRK08775 122 DQADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSG 171 (343)
T ss_pred HHHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEECc
Confidence 456888888877642 12468999999999999999999999987776543
No 36
>PRK06489 hypothetical protein; Provisional
Probab=97.45 E-value=0.0028 Score=65.54 Aligned_cols=111 Identities=18% Similarity=0.232 Sum_probs=66.6
Q ss_pred CCcEEEEeCCCCCccccccccchhhchh------hhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVA------PKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALAD 165 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA------~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD 165 (475)
+.||+|.-|.-++...+. ...+...+. ..-+-.||++..|-||+|....+. ...+..-.+.++..+|
T Consensus 69 gpplvllHG~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~------~~~~~~~~~~~~~a~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFL-SPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG------LRAAFPRYDYDDMVEA 141 (360)
T ss_pred CCeEEEeCCCCCchhhhc-cchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC------CCCCCCcccHHHHHHH
Confidence 346888888766543221 012221220 012468999999999998532210 0011222455655556
Q ss_pred HHHHHHHHhhhCCCCCCCE-EEEccChhhHHHHHHHHhCCCeeEEEEecc
Q 011907 166 YASLIIDLKKNLTATDSPV-VVFGGSYGGMLAAWFRLKYPHVAIGALASS 214 (475)
Q Consensus 166 ~a~Fi~~~k~~~~~~~~pw-I~fGGSY~G~LAAW~R~kYP~lv~gavASS 214 (475)
+..++. ..+.. .++ +++|.|+||++|..+-.+||+.+.+.+..+
T Consensus 142 ~~~~l~---~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~ 186 (360)
T PRK06489 142 QYRLVT---EGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMA 186 (360)
T ss_pred HHHHHH---HhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeec
Confidence 555432 22221 255 689999999999999999999999888543
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.41 E-value=0.00036 Score=65.29 Aligned_cols=91 Identities=20% Similarity=0.247 Sum_probs=61.5
Q ss_pred CcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIID 172 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~ 172 (475)
-||+|..|.-++...+ ..+...+++ +.-|+++++|-+|.|.+.. ..+.++..+|+..++
T Consensus 5 ~~iv~~HG~~~~~~~~---~~~~~~l~~--~~~vi~~d~~G~G~s~~~~--------------~~~~~~~~~~~~~~~-- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVF---RCLDEELSA--HFTLHLVDLPGHGRSRGFG--------------PLSLADAAEAIAAQA-- 63 (245)
T ss_pred ceEEEEcCCCCchhhH---HHHHHhhcc--CeEEEEecCCcCccCCCCC--------------CcCHHHHHHHHHHhC--
Confidence 3677777754433221 112334544 4789999999999985422 224455555543321
Q ss_pred HhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEe
Q 011907 173 LKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALA 212 (475)
Q Consensus 173 ~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavA 212 (475)
+.|++++|.|+||++|..+-.+||+.+.+.+.
T Consensus 64 --------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il 95 (245)
T TIGR01738 64 --------PDPAIWLGWSLGGLVALHIAATHPDRVRALVT 95 (245)
T ss_pred --------CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeE
Confidence 24899999999999999999999998888764
No 38
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.41 E-value=0.00074 Score=69.15 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=69.3
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||+|..|.-+....+. -+...|++. -.|+.+++|.+|.|.+... ..+.++..+|+..+++
T Consensus 131 ~~~vl~~HG~~~~~~~~~---~~~~~l~~~--~~v~~~d~~g~G~s~~~~~-------------~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNWL---FNHAALAAG--RPVIALDLPGHGASSKAVG-------------AGSLDELAAAVLAFLD 192 (371)
T ss_pred CCeEEEECCCCCccchHH---HHHHHHhcC--CEEEEEcCCCCCCCCCCCC-------------CCCHHHHHHHHHHHHH
Confidence 345666666555443221 123345554 6899999999999854222 2355666677777765
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
.+. ..+++++|+|+||.+|.-+-.++|+.+.+.+.-+++
T Consensus 193 ~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 193 ALG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred hcC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 432 237999999999999998889999999888876654
No 39
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.40 E-value=0.00098 Score=67.75 Aligned_cols=118 Identities=16% Similarity=0.144 Sum_probs=90.0
Q ss_pred eEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCC
Q 011907 77 QRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGY 156 (475)
Q Consensus 77 QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~y 156 (475)
-||++-.. + ..+||++|.+=|=-+....+. -.+..+|.+. --+|++.-|.||.|-+-.. -.-
T Consensus 32 I~~h~~e~-g---~~~gP~illlHGfPe~wyswr--~q~~~la~~~-~rviA~DlrGyG~Sd~P~~-----------~~~ 93 (322)
T KOG4178|consen 32 IRLHYVEG-G---PGDGPIVLLLHGFPESWYSWR--HQIPGLASRG-YRVIAPDLRGYGFSDAPPH-----------ISE 93 (322)
T ss_pred EEEEEEee-c---CCCCCEEEEEccCCccchhhh--hhhhhhhhcc-eEEEecCCCCCCCCCCCCC-----------cce
Confidence 47777776 3 258998888776644433332 2245566654 8899999999999865332 224
Q ss_pred CChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 157 LSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 157 Lts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
-|++.-.+|+..++.++. ..+++++|+.||+++|=++++.||+.+.|-+..|.|-.
T Consensus 94 Yt~~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 94 YTIDELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred eeHHHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 567777799999999877 35899999999999999999999999999999887764
No 40
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.40 E-value=9.1e-05 Score=70.44 Aligned_cols=93 Identities=19% Similarity=0.182 Sum_probs=67.8
Q ss_pred hchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHH
Q 011907 116 YDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGML 195 (475)
Q Consensus 116 ~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~L 195 (475)
..+-.+.|-.|+.+..|--+. +++. +. +.++.-.-.+.+.|+...++++.++......++.++|+||||.+
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g---~g~~----~~--~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGG---YGKD----FH--EAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYL 77 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSS---SHHH----HH--HTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCCCc---cchh----HH--HhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccc
Confidence 345556789999999996542 2211 10 12233444678999999999998776545569999999999999
Q ss_pred HHHHHHhCCCeeEEEEeccccc
Q 011907 196 AAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 196 AAW~R~kYP~lv~gavASSAPv 217 (475)
|+++-.++|+++.++++.++++
T Consensus 78 a~~~~~~~~~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 78 ALLAATQHPDRFKAAVAGAGVS 99 (213)
T ss_dssp HHHHHHHTCCGSSEEEEESE-S
T ss_pred cchhhcccceeeeeeeccceec
Confidence 9999999999999999988765
No 41
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.39 E-value=0.00064 Score=67.96 Aligned_cols=103 Identities=14% Similarity=0.127 Sum_probs=67.2
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||+|..|.-..... +. -.+..+++ +--||++++|-||.|..-.+. . .+.+.-.+|++.+++
T Consensus 34 ~~~iv~lHG~~~~~~~-~~--~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~-----------~-~~~~~~~~~~~~~~~ 96 (286)
T PRK03204 34 GPPILLCHGNPTWSFL-YR--DIIVALRD--RFRCVAPDYLGFGLSERPSGF-----------G-YQIDEHARVIGEFVD 96 (286)
T ss_pred CCEEEEECCCCccHHH-HH--HHHHHHhC--CcEEEEECCCCCCCCCCCCcc-----------c-cCHHHHHHHHHHHHH
Confidence 4567777775321111 11 11223443 368999999999998542221 1 244555555666655
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
.+ . ..+++++|+|+||++|..+-.+||+.+.+.+..+++.
T Consensus 97 ~~----~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 97 HL----G--LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred Hh----C--CCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 43 2 2479999999999999999999999999998766554
No 42
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.38 E-value=0.00069 Score=83.20 Aligned_cols=122 Identities=21% Similarity=0.192 Sum_probs=80.0
Q ss_pred EEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCC
Q 011907 78 RYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYL 157 (475)
Q Consensus 78 RY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yL 157 (475)
+||+.-.-+.....+.||+|..|.-++...+ ..++..+++. .-||.+++|.||.|...+..+ ....-..+
T Consensus 1357 ~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w---~~~~~~L~~~--~rVi~~Dl~G~G~S~~~~~~~-----~~~~~~~~ 1426 (1655)
T PLN02980 1357 SCLIKVHEVGQNAEGSVVLFLHGFLGTGEDW---IPIMKAISGS--ARCISIDLPGHGGSKIQNHAK-----ETQTEPTL 1426 (1655)
T ss_pred EEEEEEEecCCCCCCCeEEEECCCCCCHHHH---HHHHHHHhCC--CEEEEEcCCCCCCCCCccccc-----cccccccC
Confidence 5666544443211234677777766554422 1234455553 589999999999996433210 00111245
Q ss_pred ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 158 SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
+.+...+|++.++++++. .|++++|.|+||++|..+-.+||+.+.+.+.-|+
T Consensus 1427 si~~~a~~l~~ll~~l~~------~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1427 SVELVADLLYKLIEHITP------GKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred CHHHHHHHHHHHHHHhCC------CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 777777788888776532 4899999999999999999999999998875443
No 43
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.33 E-value=0.00073 Score=72.99 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=73.1
Q ss_pred CcEEEEeCCCCCccccccccchhhchhh--hcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHH-HH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAP--KFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYA-SL 169 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~--~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a-~F 169 (475)
.||+|..|.-++...+.. -.+..+++ +.+--||+++.|-||+|-...+ ...+.++-.+|+. .+
T Consensus 202 ~~VVLlHG~~~s~~~W~~--~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~------------~~ytl~~~a~~l~~~l 267 (481)
T PLN03087 202 EDVLFIHGFISSSAFWTE--TLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD------------SLYTLREHLEMIERSV 267 (481)
T ss_pred CeEEEECCCCccHHHHHH--HHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC------------CcCCHHHHHHHHHHHH
Confidence 578888887665442211 11233443 3467999999999999853221 1346777777774 55
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++.+. ..|++++|+|+||++|..+-.+||+.+.+.+.-++|.
T Consensus 268 l~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 268 LERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 55432 2489999999999999999999999998888877654
No 44
>PLN02578 hydrolase
Probab=97.32 E-value=0.00076 Score=69.63 Aligned_cols=97 Identities=21% Similarity=0.242 Sum_probs=69.8
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+.||+|..|.-++...+. -.+..++++ -.||++..|-+|.|-.- . ..| +.+...+|++.|++
T Consensus 86 g~~vvliHG~~~~~~~w~---~~~~~l~~~--~~v~~~D~~G~G~S~~~-~-----------~~~-~~~~~a~~l~~~i~ 147 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWR---YNIPELAKK--YKVYALDLLGFGWSDKA-L-----------IEY-DAMVWRDQVADFVK 147 (354)
T ss_pred CCeEEEECCCCCCHHHHH---HHHHHHhcC--CEEEEECCCCCCCCCCc-c-----------ccc-CHHHHHHHHHHHHH
Confidence 567877777544322111 123456653 68999999999998431 1 123 56666788888888
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEe
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALA 212 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavA 212 (475)
.+.. .|++++|+|+||++|..+-.+||+.+.+.+.
T Consensus 148 ~~~~------~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvL 182 (354)
T PLN02578 148 EVVK------EPAVLVGNSLGGFTALSTAVGYPELVAGVAL 182 (354)
T ss_pred Hhcc------CCeEEEEECHHHHHHHHHHHhChHhcceEEE
Confidence 7642 4899999999999999999999999988765
No 45
>PRK10985 putative hydrolase; Provisional
Probab=97.32 E-value=0.0011 Score=67.69 Aligned_cols=108 Identities=22% Similarity=0.210 Sum_probs=70.1
Q ss_pred Cc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 93 AP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 93 gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
.| |++.-|..+....... ..+. +...+.|-.+|.+.+|-+|.|-.... +..+.. .++|++.++.
T Consensus 58 ~p~vll~HG~~g~~~~~~~-~~~~-~~l~~~G~~v~~~d~rG~g~~~~~~~------------~~~~~~-~~~D~~~~i~ 122 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYA-HGLL-EAAQKRGWLGVVMHFRGCSGEPNRLH------------RIYHSG-ETEDARFFLR 122 (324)
T ss_pred CCEEEEeCCCCCCCcCHHH-HHHH-HHHHHCCCEEEEEeCCCCCCCccCCc------------ceECCC-chHHHHHHHH
Confidence 45 5555565554321111 1122 33445688999999999997632110 111112 2589999998
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCe--eEEEEeccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHV--AIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~l--v~gavASSAPv 217 (475)
.+++.+. ..|++++|.|+||.+++.+-.++++- +.++++-|+|.
T Consensus 123 ~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 123 WLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred HHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 8887653 46899999999999888887777654 77777777786
No 46
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.31 E-value=0.0014 Score=65.61 Aligned_cols=80 Identities=15% Similarity=-0.047 Sum_probs=63.9
Q ss_pred cCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHH
Q 011907 122 FKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL 201 (475)
Q Consensus 122 ~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~ 201 (475)
.|-.++.+.+|-||+|.. +. . -.+.++.++|+...++.+++.. ..|++++|.|+||.+|..+-.
T Consensus 55 ~Gy~Vl~~Dl~G~G~S~g--~~------~-----~~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~ 118 (266)
T TIGR03101 55 GGFGVLQIDLYGCGDSAG--DF------A-----AARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAAN 118 (266)
T ss_pred CCCEEEEECCCCCCCCCC--cc------c-----cCCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHH
Confidence 577999999999999853 21 1 1256778899999888887642 358999999999999999999
Q ss_pred hCCCeeEEEEeccccc
Q 011907 202 KYPHVAIGALASSAPI 217 (475)
Q Consensus 202 kYP~lv~gavASSAPv 217 (475)
++|+.+.+.+..+.++
T Consensus 119 ~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 119 PLAAKCNRLVLWQPVV 134 (266)
T ss_pred hCccccceEEEecccc
Confidence 9999998888776443
No 47
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.31 E-value=0.0018 Score=64.61 Aligned_cols=122 Identities=19% Similarity=0.154 Sum_probs=67.4
Q ss_pred CCcEEEEeCCCCC-ccccccccchhhchhhhcCceEEEEeeeeeecCccCCCC-----cccc-ccCC--C--CCCCCChh
Q 011907 92 NAPIFVYTGNEGD-IEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGN-----KEIA-YKNA--S--TTGYLSST 160 (475)
Q Consensus 92 ~gPIfly~GgEg~-~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~-----~~~~-~~st--~--nL~yLts~ 160 (475)
..|+++++-|-+. .+.+ ...+.+..+|.+.|-.||+.+-...|...+-.+. .... |.+. . ...|--.+
T Consensus 41 ~~P~vvllHG~~~~~~~~-~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENF-MIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCccHH-HhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 4686666555443 3322 2223356788888999999985333332221000 0000 0000 0 00111011
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 161 QALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
..+.|+..+ +++.+.....+++++|.|+||.+|.++-.+||+.+.+.++-|+..
T Consensus 120 ~~~~~l~~~---~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 120 YIVQELPAL---VAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHH---HHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 122333333 334444445689999999999999999999999998888766543
No 48
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.28 E-value=0.0012 Score=68.52 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=67.9
Q ss_pred CcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIID 172 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~ 172 (475)
.||+|.-|.-++...+. ..+..+++ +--||++++|-||+|.+..+ .. .+.+...+|+..|++.
T Consensus 89 p~lvllHG~~~~~~~w~---~~~~~L~~--~~~via~Dl~G~G~S~~~~~-----------~~-~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 89 PPVLLVHGFGASIPHWR---RNIGVLAK--NYTVYAIDLLGFGASDKPPG-----------FS-YTMETWAELILDFLEE 151 (360)
T ss_pred CeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCCCC-----------cc-ccHHHHHHHHHHHHHH
Confidence 34655555444332211 12334555 57999999999999964222 12 3666767788888875
Q ss_pred HhhhCCCCCCCEEEEccChhhHHHHHHHH-hCCCeeEEEEecccc
Q 011907 173 LKKNLTATDSPVVVFGGSYGGMLAAWFRL-KYPHVAIGALASSAP 216 (475)
Q Consensus 173 ~k~~~~~~~~pwI~fGGSY~G~LAAW~R~-kYP~lv~gavASSAP 216 (475)
+.. .|++++|.|+||.+|..+-. ++|+.+.+.+.-+++
T Consensus 152 l~~------~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 152 VVQ------KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred hcC------CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 432 48999999999999876654 689999988866554
No 49
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.16 E-value=0.0019 Score=70.93 Aligned_cols=110 Identities=15% Similarity=0.029 Sum_probs=77.3
Q ss_pred CCcEEEEeCCCCCccc--cccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEW--FAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~--~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
..|++|++.|-+.... ..........+| +.|-.||...+|.+|.|-- .. ..++ .+-.+|+..+
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g--~~-----------~~~~-~~~~~D~~~~ 85 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFV-AQGYAVVIQDTRGRGASEG--EF-----------DLLG-SDEAADGYDL 85 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHH-hCCcEEEEEeccccccCCC--ce-----------EecC-cccchHHHHH
Confidence 4688888777653211 000111122333 4599999999999999852 21 1122 5678999999
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
|++++++-- .+.++.++|.||||.++..+-..+|..+.+.++.++..
T Consensus 86 i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 86 VDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 999987632 24599999999999999999999999888888766654
No 50
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.11 E-value=0.0022 Score=62.45 Aligned_cols=117 Identities=24% Similarity=0.264 Sum_probs=77.2
Q ss_pred CCcEEE-EeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFV-YTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfl-y~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
.-|++| +.|.-++.+.+...++ +.++|++.|.+||+.|--.-.. +.. ++.-.+....-...+ .+.++..|
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~-~~~lAd~~GfivvyP~~~~~~~--~~~-----cw~w~~~~~~~g~~d-~~~i~~lv 85 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSG-WNALADREGFIVVYPEQSRRAN--PQG-----CWNWFSDDQQRGGGD-VAFIAALV 85 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcC-HHHHhhcCCeEEEcccccccCC--CCC-----cccccccccccCccc-hhhHHHHH
Confidence 357555 5666666666555444 5789999999999988421110 100 110000001111111 23466778
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+++..+++....+|.+.|-|-||+++.-+-..||++|.|+-..|++.
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 88888888888899999999999999999999999999877767665
No 51
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.11 E-value=0.0015 Score=63.41 Aligned_cols=90 Identities=17% Similarity=0.230 Sum_probs=61.9
Q ss_pred cEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHH
Q 011907 94 PIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDL 173 (475)
Q Consensus 94 PIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~ 173 (475)
||+|..|.-++...+. -++..|+++ --|+++++|-+|.|...+ ..+.++..+|+..+
T Consensus 15 ~ivllHG~~~~~~~w~---~~~~~L~~~--~~vi~~Dl~G~G~S~~~~--------------~~~~~~~~~~l~~~---- 71 (256)
T PRK10349 15 HLVLLHGWGLNAEVWR---CIDEELSSH--FTLHLVDLPGFGRSRGFG--------------ALSLADMAEAVLQQ---- 71 (256)
T ss_pred eEEEECCCCCChhHHH---HHHHHHhcC--CEEEEecCCCCCCCCCCC--------------CCCHHHHHHHHHhc----
Confidence 3888888654443221 234455544 789999999999985211 12455555554321
Q ss_pred hhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEe
Q 011907 174 KKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALA 212 (475)
Q Consensus 174 k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavA 212 (475)
. ..+++++|+|+||.+|..+-.++|+.+.+.+.
T Consensus 72 ----~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil 104 (256)
T PRK10349 72 ----A--PDKAIWLGWSLGGLVASQIALTHPERVQALVT 104 (256)
T ss_pred ----C--CCCeEEEEECHHHHHHHHHHHhChHhhheEEE
Confidence 1 24799999999999999999999999998864
No 52
>PRK07581 hypothetical protein; Validated
Probab=97.03 E-value=0.002 Score=65.77 Aligned_cols=115 Identities=13% Similarity=0.072 Sum_probs=62.6
Q ss_pred CCcEEEEeCCCCCccccccc-cchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQN-TGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~-~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
+.|++|+++|=+.-...+.- -+....++ ..+--||++..|-||.|.+-.+.. ..+ +.+.+...+.. .|++...
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~-~~~-~~~~~~~~~~~---~~~~~~~ 113 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALD-PEKYFIIIPNMFGNGLSSSPSNTP-APF-NAARFPHVTIY---DNVRAQH 113 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccC-cCceEEEEecCCCCCCCCCCCCCC-CCC-CCCCCCceeHH---HHHHHHH
Confidence 45777777765422111100 00001233 235689999999999996422100 000 22222223332 3333322
Q ss_pred HHHhhhCCCCCCC-EEEEccChhhHHHHHHHHhCCCeeEEEEecc
Q 011907 171 IDLKKNLTATDSP-VVVFGGSYGGMLAAWFRLKYPHVAIGALASS 214 (475)
Q Consensus 171 ~~~k~~~~~~~~p-wI~fGGSY~G~LAAW~R~kYP~lv~gavASS 214 (475)
..+...+.. .+ ++++|+|+||++|..+-..||+.+.+.+.-+
T Consensus 114 ~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~ 156 (339)
T PRK07581 114 RLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIA 156 (339)
T ss_pred HHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeee
Confidence 222222221 36 5899999999999999999999988766443
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.95 E-value=0.0062 Score=60.64 Aligned_cols=105 Identities=14% Similarity=0.040 Sum_probs=72.5
Q ss_pred CcEEEEeCCCCCc-cccccccchhhchhh---hcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 93 APIFVYTGNEGDI-EWFAQNTGFMYDVAP---KFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 93 gPIfly~GgEg~~-~~~~~~~g~~~~lA~---~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
.+|+++.||-+.. .... ....+|+ +.|-.++.++.|.+|+|.+ +. .+.++..+|+..
T Consensus 27 ~~vv~i~gg~~~~~g~~~----~~~~la~~l~~~G~~v~~~Dl~G~G~S~~--~~-------------~~~~~~~~d~~~ 87 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHR----QFVLLARRLAEAGFPVLRFDYRGMGDSEG--EN-------------LGFEGIDADIAA 87 (274)
T ss_pred CeEEEEeCCccccCCchh----HHHHHHHHHHHCCCEEEEeCCCCCCCCCC--CC-------------CCHHHHHHHHHH
Confidence 4677777765432 1111 1223444 3578999999999999853 11 244677899999
Q ss_pred HHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 169 LIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 169 Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
++..++++.. ...+++++|.|.||.+|..+... |+.+.|.+.-|+++.
T Consensus 88 ~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 88 AIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 9999987642 12469999999999998888654 467888888887754
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=96.90 E-value=0.0019 Score=70.16 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=67.4
Q ss_pred CcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIID 172 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~ 172 (475)
.||+|+-|.=++... +. .....+++ +-.|+++++|.||.|.+..+. +-.|.++..+|++.+++.
T Consensus 26 ~~ivllHG~~~~~~~-w~--~~~~~L~~--~~~Vi~~D~~G~G~S~~~~~~-----------~~~~~~~~a~dl~~~i~~ 89 (582)
T PRK05855 26 PTVVLVHGYPDNHEV-WD--GVAPLLAD--RFRVVAYDVRGAGRSSAPKRT-----------AAYTLARLADDFAAVIDA 89 (582)
T ss_pred CeEEEEcCCCchHHH-HH--HHHHHhhc--ceEEEEecCCCCCCCCCCCcc-----------cccCHHHHHHHHHHHHHH
Confidence 346666665433322 11 12334543 468999999999999643321 136889999999999987
Q ss_pred HhhhCCCCCCCEEEEccChhhHHHHHH--HHhCCCeeEEEEeccccc
Q 011907 173 LKKNLTATDSPVVVFGGSYGGMLAAWF--RLKYPHVAIGALASSAPI 217 (475)
Q Consensus 173 ~k~~~~~~~~pwI~fGGSY~G~LAAW~--R~kYP~lv~gavASSAPv 217 (475)
++. ..|++++|+|+||+++.-+ +.++|+.+.+..+.++|.
T Consensus 90 l~~-----~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 90 VSP-----DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPS 131 (582)
T ss_pred hCC-----CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 642 3479999999999877433 334566666555555553
No 55
>PLN02442 S-formylglutathione hydrolase
Probab=96.89 E-value=0.011 Score=59.33 Aligned_cols=121 Identities=20% Similarity=0.155 Sum_probs=66.5
Q ss_pred CCCcEEEEeCCCC-CccccccccchhhchhhhcCceEEEEeeeeeecCcc-------CCCCcccccc--CCCC---CCCC
Q 011907 91 NNAPIFVYTGNEG-DIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIP-------YGGNKEIAYK--NAST---TGYL 157 (475)
Q Consensus 91 ~~gPIfly~GgEg-~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P-------~~~~~~~~~~--st~n---L~yL 157 (475)
++-||++++=|.+ .-+.+.. .+-+.+++.+.|..||..+=+..|.-.+ ++.. ..-|. ..+. .+++
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~-~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 122 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQ-KSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVG-AGFYLNATQEKWKNWRMY 122 (283)
T ss_pred CCCCEEEEecCCCcChHHHHH-hhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCC-cceeeccccCCCcccchh
Confidence 3578777655543 3222222 2224566677888999987544441100 0000 00000 0011 2332
Q ss_pred ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 158 SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+ ..++++...+...-..+ ...+++++|.|+||.+|.++-.+||+.+.++++-|++.
T Consensus 123 ~--~~~~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 123 D--YVVKELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred h--hHHHHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 2 23344444443332222 23579999999999999999999999998887777654
No 56
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=96.83 E-value=0.0054 Score=65.14 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=70.0
Q ss_pred CCcEEEEeCCCCCc-cccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDI-EWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly~GgEg~~-~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
..|++|++||-+.. +... ..+.....+.|-.|+.++.|-+|+|..... . ..... ..+++ +
T Consensus 193 ~~P~Vli~gG~~~~~~~~~---~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-------~-~d~~~--~~~av------l 253 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYY---RLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-------T-QDSSL--LHQAV------L 253 (414)
T ss_pred CccEEEEeCCcccchhhhH---HHHHHHHHhCCCEEEEECCCCCCCCCCCCc-------c-ccHHH--HHHHH------H
Confidence 47899999886542 1111 112233345689999999999999864321 0 11100 01222 3
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
..++..-.....++.++|.|+||.+|..+-.++|+.+.|+++-++|+.
T Consensus 254 d~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 254 NALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 333332122346899999999999999999999999999999888763
No 57
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.69 E-value=0.0093 Score=59.57 Aligned_cols=118 Identities=19% Similarity=0.278 Sum_probs=80.5
Q ss_pred eeEEecCCCCCCCCCCCCeeeeEEEEeccccCCCCCCCcEEEEeCCCCC--ccccccccchhhchhhhcCceEEEEeeee
Q 011907 56 KYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGD--IEWFAQNTGFMYDVAPKFKALLVFIEHRY 133 (475)
Q Consensus 56 ~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~--~~~~~~~~g~~~~lA~~~gA~vv~lEHRy 133 (475)
.||+-+.|---.. +..||+--|-... .+.||||+..=|-|. +++ . -+..+|..+...-++++.-|-
T Consensus 45 ~yFdekedv~i~~--~~~t~n~Y~t~~~------~t~gpil~l~HG~G~S~LSf-A---~~a~el~s~~~~r~~a~DlRg 112 (343)
T KOG2564|consen 45 DYFDEKEDVSIDG--SDLTFNVYLTLPS------ATEGPILLLLHGGGSSALSF-A---IFASELKSKIRCRCLALDLRG 112 (343)
T ss_pred HhhccccccccCC--CcceEEEEEecCC------CCCccEEEEeecCcccchhH-H---HHHHHHHhhcceeEEEeeccc
Confidence 4688887764332 2247765444333 247999988655543 222 1 245688888888999999999
Q ss_pred eecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 134 YGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 134 YG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+|+|+--+.. -|+.|--..|+...|+.+ +.....|+|++|+|.||++|+...
T Consensus 113 HGeTk~~~e~------------dlS~eT~~KD~~~~i~~~---fge~~~~iilVGHSmGGaIav~~a 164 (343)
T KOG2564|consen 113 HGETKVENED------------DLSLETMSKDFGAVIKEL---FGELPPQIILVGHSMGGAIAVHTA 164 (343)
T ss_pred cCccccCChh------------hcCHHHHHHHHHHHHHHH---hccCCCceEEEeccccchhhhhhh
Confidence 9998753321 278888888987666543 333456899999999999997654
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=96.65 E-value=0.0042 Score=54.32 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=61.7
Q ss_pred cEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHH
Q 011907 94 PIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDL 173 (475)
Q Consensus 94 PIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~ 173 (475)
||++.-|+=++...+ ..+...+|++ |-.++.+++|+.|.+. .. + ..+++|+++.
T Consensus 1 ~vv~~HG~~~~~~~~---~~~~~~l~~~-G~~v~~~~~~~~~~~~---~~--------~-----~~~~~~~~~~------ 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY---QPLAEALAEQ-GYAVVAFDYPGHGDSD---GA--------D-----AVERVLADIR------ 54 (145)
T ss_dssp EEEEECTTTTTTHHH---HHHHHHHHHT-TEEEEEESCTTSTTSH---HS--------H-----HHHHHHHHHH------
T ss_pred CEEEECCCCCCHHHH---HHHHHHHHHC-CCEEEEEecCCCCccc---hh--------H-----HHHHHHHHHH------
Confidence 567777765543322 2344566776 9999999999999871 11 1 3334444433
Q ss_pred hhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 174 KKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 174 k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
+... ...+++++|.|.||.+++.+-.++ ..+.++++-++
T Consensus 55 -~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 -AGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp -HHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred -hhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 2222 346999999999999999999999 55556666555
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.65 E-value=0.0085 Score=61.72 Aligned_cols=88 Identities=11% Similarity=0.176 Sum_probs=65.6
Q ss_pred cchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHH-HHHHHHHHHHhhhCCCCCCCEEEEccC
Q 011907 112 TGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQAL-ADYASLIIDLKKNLTATDSPVVVFGGS 190 (475)
Q Consensus 112 ~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QAL-aD~a~Fi~~~k~~~~~~~~pwI~fGGS 190 (475)
.+++..+++ .|-.|+.+++|.+|.|.. .++.+.-. .|+...++.+++... ..|++++|+|
T Consensus 84 ~~~~~~L~~-~G~~V~~~D~~g~g~s~~----------------~~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS 144 (350)
T TIGR01836 84 RSLVRGLLE-RGQDVYLIDWGYPDRADR----------------YLTLDDYINGYIDKCVDYICRTSK--LDQISLLGIC 144 (350)
T ss_pred chHHHHHHH-CCCeEEEEeCCCCCHHHh----------------cCCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEEC
Confidence 344445554 578899999998886531 23444444 447777887776643 3589999999
Q ss_pred hhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 191 YGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 191 Y~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
+||++++.+-.++|+.+.+.++.++|+.
T Consensus 145 ~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 145 QGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHHHhCchheeeEEEeccccc
Confidence 9999999999999999998888888873
No 60
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.63 E-value=0.0037 Score=58.92 Aligned_cols=103 Identities=23% Similarity=0.179 Sum_probs=69.5
Q ss_pred EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHh
Q 011907 95 IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLK 174 (475)
Q Consensus 95 Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k 174 (475)
||++.||=.-.........+...+|++.|..|+.++.|-. | +. +..+++.|+...++++.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p--~~--------------~~p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----P--EA--------------PFPAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----T--TS--------------STTHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----c--cc--------------cccccccccccceeeec
Confidence 5666676654322222234566899999999999999943 2 11 23588999999999988
Q ss_pred hh---CCCCCCCEEEEccChhhHHHHHHHHhCCCe----eEEEEeccccc
Q 011907 175 KN---LTATDSPVVVFGGSYGGMLAAWFRLKYPHV----AIGALASSAPI 217 (475)
Q Consensus 175 ~~---~~~~~~pwI~fGGSY~G~LAAW~R~kYP~l----v~gavASSAPv 217 (475)
++ +.....+++++|.|-||.||+.+-++..+. +.+.+..|++.
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 76 444456999999999999999988766654 66777766543
No 61
>PRK10115 protease 2; Provisional
Probab=96.62 E-value=0.0052 Score=69.38 Aligned_cols=114 Identities=21% Similarity=0.225 Sum_probs=73.3
Q ss_pred CCcEEEEe-CCCCCc-cccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 92 NAPIFVYT-GNEGDI-EWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 92 ~gPIfly~-GgEg~~-~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
..|++||+ ||-+.. .+... .....|+. .|..|+..--|-=|+ +|. .|.. .-+.+.-...+.|+..-
T Consensus 444 ~~P~ll~~hGg~~~~~~p~f~--~~~~~l~~-rG~~v~~~n~RGs~g---~G~----~w~~--~g~~~~k~~~~~D~~a~ 511 (686)
T PRK10115 444 HNPLLVYGYGSYGASIDADFS--FSRLSLLD-RGFVYAIVHVRGGGE---LGQ----QWYE--DGKFLKKKNTFNDYLDA 511 (686)
T ss_pred CCCEEEEEECCCCCCCCCCcc--HHHHHHHH-CCcEEEEEEcCCCCc---cCH----HHHH--hhhhhcCCCcHHHHHHH
Confidence 35888875 444322 11111 11234555 477777777775222 221 1111 11233344778898888
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++++.++--....++.+.||||||.|++|+--.+|+++.|+|+..+++
T Consensus 512 ~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 512 CDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred HHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 888876543445699999999999999999999999999999976544
No 62
>PRK11460 putative hydrolase; Provisional
Probab=96.50 E-value=0.016 Score=56.44 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 159 STQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 159 s~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++++++++..+++.+..++.....+++++|.|.||++|.++-.++|+++.++++-|+.+
T Consensus 80 ~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 80 VAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 34556666677777776666556789999999999999999999999988877766543
No 63
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=96.49 E-value=0.013 Score=66.71 Aligned_cols=80 Identities=23% Similarity=0.263 Sum_probs=54.9
Q ss_pred cCceEEEEeeeeeecCccCCCCccc-cccCCCCCCCCC----------hhhHHHHHHHHHHHHh------hhC----CCC
Q 011907 122 FKALLVFIEHRYYGKSIPYGGNKEI-AYKNASTTGYLS----------STQALADYASLIIDLK------KNL----TAT 180 (475)
Q Consensus 122 ~gA~vv~lEHRyYG~S~P~~~~~~~-~~~st~nL~yLt----------s~QALaD~a~Fi~~~k------~~~----~~~ 180 (475)
.|-.+|.++||.||+|.--.+- +. +-++.+-+.|++ .+|++.|+..++..++ .++ ..+
T Consensus 475 ~Gy~VIaiDlpGHG~S~~~~~~-~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~ 553 (792)
T TIGR03502 475 AGVATIAIDHPLHGARSFDANA-SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVID 553 (792)
T ss_pred CCcEEEEeCCCCCCcccccccc-ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 3567999999999999432110 00 000112344543 4999999999999988 221 124
Q ss_pred CCCEEEEccChhhHHHHHHHHh
Q 011907 181 DSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 181 ~~pwI~fGGSY~G~LAAW~R~k 202 (475)
..||.++|+|.||.++.-+-..
T Consensus 554 ~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 554 GSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCcEEEEecCHHHHHHHHHHHh
Confidence 6799999999999999988743
No 64
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.41 E-value=0.0076 Score=62.04 Aligned_cols=89 Identities=20% Similarity=0.198 Sum_probs=60.0
Q ss_pred cCceEEEEeeee--eecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCC-EEEEccChhhHHHHH
Q 011907 122 FKALLVFIEHRY--YGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSP-VVVFGGSYGGMLAAW 198 (475)
Q Consensus 122 ~gA~vv~lEHRy--YG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~p-wI~fGGSY~G~LAAW 198 (475)
-+-.||.+.||- +|.|.|-........ -..+..-.|.++-.+|++.+++.+.. .+ ++++|+|+||++|..
T Consensus 71 ~~~~vi~~D~~G~~~g~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~l~G~S~Gg~ia~~ 143 (351)
T TIGR01392 71 DRYFVVCSNVLGGCYGSTGPSSINPGGRP-YGSDFPLITIRDDVKAQKLLLDHLGI------EQIAAVVGGSMGGMQALE 143 (351)
T ss_pred CceEEEEecCCCCCCCCCCCCCCCCCCCc-CCCCCCCCcHHHHHHHHHHHHHHcCC------CCceEEEEECHHHHHHHH
Confidence 356999999998 777766321100000 00011135677777777777765432 25 999999999999999
Q ss_pred HHHhCCCeeEEEEeccccc
Q 011907 199 FRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 199 ~R~kYP~lv~gavASSAPv 217 (475)
+-.+||+.+.+.+..+++.
T Consensus 144 ~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 144 WAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHChHhhheEEEEccCC
Confidence 9999999998877765543
No 65
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.28 E-value=0.01 Score=54.59 Aligned_cols=100 Identities=23% Similarity=0.266 Sum_probs=68.7
Q ss_pred cEEEEeCCCCCccccccccchhhchhhhcC-ceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHH
Q 011907 94 PIFVYTGNEGDIEWFAQNTGFMYDVAPKFK-ALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIID 172 (475)
Q Consensus 94 PIfly~GgEg~~~~~~~~~g~~~~lA~~~g-A~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~ 172 (475)
||++.-|..+....+.. ....+++... --++++.-|-+|.|.+. .. +..++ .+|+..|+..
T Consensus 23 ~i~~~hg~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~g~g~s~~~-~~------~~~~~--------~~~~~~~~~~ 84 (282)
T COG0596 23 PLVLLHGFPGSSSVWRP---VFKVLPALAARYRVIAPDLRGHGRSDPA-GY------SLSAY--------ADDLAALLDA 84 (282)
T ss_pred eEEEeCCCCCchhhhHH---HHHHhhccccceEEEEecccCCCCCCcc-cc------cHHHH--------HHHHHHHHHH
Confidence 78888888876543321 1122222221 68999999999998611 00 11111 6777777765
Q ss_pred HhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 173 LKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 173 ~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+... +++++|+|+||.++..+-.++|+.+.+.+.-++++
T Consensus 85 ~~~~------~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 85 LGLE------KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred hCCC------ceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 4432 49999999999999999999999888888877665
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.01 E-value=0.021 Score=57.28 Aligned_cols=82 Identities=12% Similarity=0.025 Sum_probs=57.3
Q ss_pred hhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHH
Q 011907 118 VAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAA 197 (475)
Q Consensus 118 lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAA 197 (475)
+.++-+.-||++.-|.++.+. +.. .-.+++..-+|++.+++.+.+.......+++++|+|+||.+|.
T Consensus 61 ll~~~~~nVi~vD~~~~~~~~-y~~------------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg 127 (275)
T cd00707 61 YLSRGDYNVIVVDWGRGANPN-YPQ------------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAG 127 (275)
T ss_pred HHhcCCCEEEEEECccccccC-hHH------------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHH
Confidence 334456788888877653211 111 0124556667889999998776544446899999999999999
Q ss_pred HHHHhCCCeeEEEEe
Q 011907 198 WFRLKYPHVAIGALA 212 (475)
Q Consensus 198 W~R~kYP~lv~gavA 212 (475)
.+-..+|+.+...++
T Consensus 128 ~~a~~~~~~v~~iv~ 142 (275)
T cd00707 128 FAGKRLNGKLGRITG 142 (275)
T ss_pred HHHHHhcCccceeEE
Confidence 999999987655444
No 67
>PRK10162 acetyl esterase; Provisional
Probab=96.01 E-value=0.03 Score=57.20 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=58.7
Q ss_pred CCcEEEE-eCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVY-TGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly-~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
+.|+++| .||=.-.........+...+|++.|..||.++-|-- |-.. | .+++.|....+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrla----pe~~-------------~---p~~~~D~~~a~ 139 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLS----PEAR-------------F---PQAIEEIVAVC 139 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCC----CCCC-------------C---CCcHHHHHHHH
Confidence 4575555 555422221111123466899999999999997721 2111 1 23567766666
Q ss_pred HHHhh---hCCCCCCCEEEEccChhhHHHHHHHHhCC
Q 011907 171 IDLKK---NLTATDSPVVVFGGSYGGMLAAWFRLKYP 204 (475)
Q Consensus 171 ~~~k~---~~~~~~~pwI~fGGSY~G~LAAW~R~kYP 204 (475)
+++.+ +++....++++.|.|.||.||+++-++..
T Consensus 140 ~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~ 176 (318)
T PRK10162 140 CYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLR 176 (318)
T ss_pred HHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHH
Confidence 66654 34444568999999999999999887653
No 68
>PLN00021 chlorophyllase
Probab=95.74 E-value=0.045 Score=56.02 Aligned_cols=37 Identities=30% Similarity=0.303 Sum_probs=29.3
Q ss_pred CCEEEEccChhhHHHHHHHHhCCCee----EEEEecccccc
Q 011907 182 SPVVVFGGSYGGMLAAWFRLKYPHVA----IGALASSAPIL 218 (475)
Q Consensus 182 ~pwI~fGGSY~G~LAAW~R~kYP~lv----~gavASSAPv~ 218 (475)
.+++++|+|+||.+|..+-.++|+.. ..++....|+.
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 58999999999999999999999754 34444455653
No 69
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.69 E-value=0.098 Score=56.06 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=56.7
Q ss_pred CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh
Q 011907 123 KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 123 gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k 202 (475)
..-||++..|-+|.|. +.. .. . +++.+-+|+|.||+.+...+..+-.++.++|+|.||.+|..+-..
T Consensus 73 d~nVI~VDw~g~g~s~-y~~-------a~---~--~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 73 SANVIVVDWLSRAQQH-YPT-------SA---A--YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred CCEEEEEECCCcCCCC-Ccc-------cc---c--cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHh
Confidence 5899999999999763 222 11 1 235666889999998876555445689999999999999999999
Q ss_pred CCCeeEE
Q 011907 203 YPHVAIG 209 (475)
Q Consensus 203 YP~lv~g 209 (475)
+|+.+..
T Consensus 140 ~p~rV~r 146 (442)
T TIGR03230 140 TKHKVNR 146 (442)
T ss_pred CCcceeE
Confidence 9987653
No 70
>PLN02872 triacylglycerol lipase
Probab=95.62 E-value=0.04 Score=58.29 Aligned_cols=106 Identities=16% Similarity=0.066 Sum_probs=69.0
Q ss_pred CCcEEEEeCCCCCcccc-cc--ccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWF-AQ--NTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~-~~--~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
+.||+|+.|..+..+.+ .. +.++...+|+ .|-.|+..+-|-+|.|..-..+. -.+.+-++|---++|+.|+..
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~-~GydV~l~n~RG~~~s~gh~~~~---~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD-HGFDVWVGNVRGTRWSYGHVTLS---EKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHh-CCCCcccccccccccccCCCCCC---ccchhccCCcHHHHHHHHHHH
Confidence 45788888877554322 11 2344445664 57899999999888765422220 001122344444778899999
Q ss_pred HHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCC
Q 011907 169 LIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPH 205 (475)
Q Consensus 169 Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~ 205 (475)
+|+++.+.- ..|++++|+|.||+++. .-..+|+
T Consensus 150 ~id~i~~~~---~~~v~~VGhS~Gg~~~~-~~~~~p~ 182 (395)
T PLN02872 150 MIHYVYSIT---NSKIFIVGHSQGTIMSL-AALTQPN 182 (395)
T ss_pred HHHHHHhcc---CCceEEEEECHHHHHHH-HHhhChH
Confidence 999987531 35899999999998885 5557787
No 71
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.60 E-value=0.025 Score=59.40 Aligned_cols=57 Identities=32% Similarity=0.416 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHhhhCCCC--CCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 161 QALADYASLIIDLKKNLTAT--DSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~~~--~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
||| |+-.=+.++++.+... +-|+|++||||||=||...-+--|+++.|.+=-||-++
T Consensus 162 qAi-D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 162 QAI-DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHH-HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 453 5555566777666543 35999999999999999999999999999999998875
No 72
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=95.50 E-value=0.074 Score=54.94 Aligned_cols=150 Identities=17% Similarity=0.296 Sum_probs=103.5
Q ss_pred CCCcceeeeEEecCCCCCCC--CCCCCeeeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccch-hhchhhhcCce
Q 011907 49 SQGLYKTKYHTQILDHFNYN--PQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGF-MYDVAPKFKAL 125 (475)
Q Consensus 49 ~~~~~~~~~f~Q~lDHF~~~--~~~~~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~-~~~lA~~~gA~ 125 (475)
......++.|.-|++|.=+. +...++=.-+ ++--+-|+. +..||.+.+-|-||..... ...+ -..|+++ |-.
T Consensus 49 ~~~~~~eG~F~SP~~~~~~~~lP~es~~a~~~-~~~P~~~~~--~~rp~~IhLagTGDh~f~r-R~~l~a~pLl~~-gi~ 123 (348)
T PF09752_consen 49 SDCKIREGEFRSPLAFYLPGLLPEESRTARFQ-LLLPKRWDS--PYRPVCIHLAGTGDHGFWR-RRRLMARPLLKE-GIA 123 (348)
T ss_pred CceEEEEeEeCCchhhhccccCChhHhheEEE-EEECCcccc--CCCceEEEecCCCccchhh-hhhhhhhHHHHc-Ccc
Confidence 33457889999998774221 1111222223 344566632 3689999999999965433 3334 4588888 999
Q ss_pred EEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCC
Q 011907 126 LVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPH 205 (475)
Q Consensus 126 vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~ 205 (475)
-+.||.=|||.=+|-... -.++.+.+.| ++=..|.+.+.+.+..+++.+ . ..|+.+.|-|.||.+|+..--.+|.
T Consensus 124 s~~le~Pyyg~RkP~~Q~-~s~l~~VsDl-~~~g~~~i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 124 SLILENPYYGQRKPKDQR-RSSLRNVSDL-FVMGRATILESRALLHWLERE-G--YGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred eEEEecccccccChhHhh-cccccchhHH-HHHHhHHHHHHHHHHHHHHhc-C--CCceEEEEechhHhhHHhhhhcCCC
Confidence 999999999999995542 1112222333 333378889999999999887 3 3599999999999999999999998
Q ss_pred eeE
Q 011907 206 VAI 208 (475)
Q Consensus 206 lv~ 208 (475)
-+.
T Consensus 199 pv~ 201 (348)
T PF09752_consen 199 PVA 201 (348)
T ss_pred cee
Confidence 543
No 73
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=95.36 E-value=0.027 Score=62.88 Aligned_cols=109 Identities=20% Similarity=0.221 Sum_probs=69.5
Q ss_pred cEEE-EeCCCCCccccccccchhhchhhhcCceEEEEeee---eeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 94 PIFV-YTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHR---YYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 94 PIfl-y~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHR---yYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
|++| .-||........ -. .-...-...|..||...=| .||+... +. .-..+.... ++|+-..
T Consensus 395 P~i~~~hGGP~~~~~~~-~~-~~~q~~~~~G~~V~~~n~RGS~GyG~~F~--~~------~~~~~g~~~----~~D~~~~ 460 (620)
T COG1506 395 PLIVYIHGGPSAQVGYS-FN-PEIQVLASAGYAVLAPNYRGSTGYGREFA--DA------IRGDWGGVD----LEDLIAA 460 (620)
T ss_pred CEEEEeCCCCccccccc-cc-hhhHHHhcCCeEEEEeCCCCCCccHHHHH--Hh------hhhccCCcc----HHHHHHH
Confidence 7555 568753322211 11 1223444578899999888 7776543 21 111223333 4555555
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++.+++.-.....++.++||||||-++.|.-.+.| .+.+|++..+++
T Consensus 461 ~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~ 507 (620)
T COG1506 461 VDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV 507 (620)
T ss_pred HHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc
Confidence 66444443334468999999999999999999999 999999988877
No 74
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.20 E-value=0.036 Score=59.66 Aligned_cols=114 Identities=20% Similarity=0.187 Sum_probs=73.5
Q ss_pred CCCcEEEEeCCCCCccccccccchhhchhhhcC-ceEEEEeeee--eecCccCCCCccccccCCCCCCCCChhhHHHHHH
Q 011907 91 NNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFK-ALLVFIEHRY--YGKSIPYGGNKEIAYKNASTTGYLSSTQALADYA 167 (475)
Q Consensus 91 ~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~g-A~vv~lEHRy--YG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a 167 (475)
+..||++++=|-+-...... ......+|.+.+ ..||.+..|- +|- + .+..+ =.....+|.|..
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~-~~~~~~~~~~~~~~~vv~~~yRlg~~g~------~------~~~~~-~~~~n~g~~D~~ 158 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGS-LYPGDGLAREGDNVIVVSINYRLGVLGF------L------STGDI-ELPGNYGLKDQR 158 (493)
T ss_pred CCCCEEEEEcCCccccCCCC-CCChHHHHhcCCCEEEEEeccccccccc------c------cCCCC-CCCcchhHHHHH
Confidence 35798888766442221111 112345666665 8999999992 221 1 00000 112344677877
Q ss_pred HHHHHHhhhC---CCCCCCEEEEccChhhHHHHHHHHh--CCCeeEEEEecccccc
Q 011907 168 SLIIDLKKNL---TATDSPVVVFGGSYGGMLAAWFRLK--YPHVAIGALASSAPIL 218 (475)
Q Consensus 168 ~Fi~~~k~~~---~~~~~pwI~fGGSY~G~LAAW~R~k--YP~lv~gavASSAPv~ 218 (475)
.-+++++++. .....++.++|.|+||.++++.... .+.++.++|+-|++..
T Consensus 159 ~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 159 LALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 7777777653 4455689999999999999998876 4678999999888764
No 75
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.17 E-value=0.52 Score=50.89 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=48.4
Q ss_pred CceEEEEe-eeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCC-CCCCEEEEccChhhHHHH
Q 011907 123 KALLVFIE-HRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTA-TDSPVVVFGGSYGGMLAA 197 (475)
Q Consensus 123 gA~vv~lE-HRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~-~~~pwI~fGGSY~G~LAA 197 (475)
.|.||+++ ++--|.|..-.. + .-.+.+|+.+|+..|++.+-+.+.. .+.|+.++|.||||..+.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~----------~-~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p 186 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA----------D-YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAP 186 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC----------C-CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHH
Confidence 38899999 699999975221 1 1245699999999999987655543 567999999999997553
No 76
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.99 E-value=0.16 Score=51.33 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=74.0
Q ss_pred CCc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCC---------hhh
Q 011907 92 NAP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLS---------STQ 161 (475)
Q Consensus 92 ~gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLt---------s~Q 161 (475)
+.| ||++.|+-++......-+| +-.+|.+.|-+|++. +++|... ..|.+... .+.
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg-~d~lAd~~gFlV~yP------dg~~~~w--------n~~~~~~~~~p~~~~~g~dd 124 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTG-WDALADREGFLVAYP------DGYDRAW--------NANGCGNWFGPADRRRGVDD 124 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccc-hhhhhcccCcEEECc------Ccccccc--------CCCcccccCCcccccCCccH
Confidence 456 4555777776654443344 568999999999998 3333221 12333333 122
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEE--EEeccc
Q 011907 162 ALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIG--ALASSA 215 (475)
Q Consensus 162 ALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~g--avASSA 215 (475)
+.+++.++..++.++.....+|.+.|-|=||.||.|+--.||+++.| .||+..
T Consensus 125 -Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 125 -VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred -HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 34566777778888888888999999999999999999999999874 344443
No 77
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=94.91 E-value=0.049 Score=51.86 Aligned_cols=81 Identities=25% Similarity=0.299 Sum_probs=52.4
Q ss_pred CcEEEEeCCCCCccccccccchhhchhhhcCce---EEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAPKFKAL---LVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~---vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
.|||++-++.|.+..+ ..||+.+... |+.+|+...+...| ..-|.++..++++.-
T Consensus 1 ~~lf~~p~~gG~~~~y-------~~la~~l~~~~~~v~~i~~~~~~~~~~---------------~~~si~~la~~y~~~ 58 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY-------RPLARALPDDVIGVYGIEYPGRGDDEP---------------PPDSIEELASRYAEA 58 (229)
T ss_dssp -EEEEESSTTCSGGGG-------HHHHHHHTTTEEEEEEECSTTSCTTSH---------------EESSHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHH-------HHHHHhCCCCeEEEEEEecCCCCCCCC---------------CCCCHHHHHHHHHHH
Confidence 3899999999866443 4566665554 77777665552111 245667766666655
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
|+... ++.|.+++|.|+||.||--+-
T Consensus 59 I~~~~-----~~gp~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 59 IRARQ-----PEGPYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp HHHHT-----SSSSEEEEEETHHHHHHHHHH
T ss_pred hhhhC-----CCCCeeehccCccHHHHHHHH
Confidence 54322 234999999999999986654
No 78
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.75 E-value=0.46 Score=48.54 Aligned_cols=102 Identities=22% Similarity=0.235 Sum_probs=78.2
Q ss_pred CCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 91 NNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 91 ~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
+..|++++-|==|+.+.+ .++-..|+++.+..+++++-|=.|.| |.-. =++-+-.-+|+..||
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw---~sv~k~Ls~~l~~~v~~vd~RnHG~S-p~~~-------------~h~~~~ma~dv~~Fi 113 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENW---RSVAKNLSRKLGRDVYAVDVRNHGSS-PKIT-------------VHNYEAMAEDVKLFI 113 (315)
T ss_pred CCCceEEecccccCCCCH---HHHHHHhcccccCceEEEecccCCCC-cccc-------------ccCHHHHHHHHHHHH
Confidence 357899998866665432 34667999999999999999999987 3221 223556668999999
Q ss_pred HHHhhhCCCCCCCEEEEccChhh-HHHHHHHHhCCCeeEEEE
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGG-MLAAWFRLKYPHVAIGAL 211 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G-~LAAW~R~kYP~lv~gav 211 (475)
+.++.+. ...|+++.|+|.|| -+++-.-.++|+.+.=+|
T Consensus 114 ~~v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rli 153 (315)
T KOG2382|consen 114 DGVGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLI 153 (315)
T ss_pred HHccccc--ccCCceecccCcchHHHHHHHHHhcCcccceeE
Confidence 9887552 34699999999999 888888999999965444
No 79
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=94.29 E-value=0.051 Score=52.65 Aligned_cols=50 Identities=24% Similarity=0.316 Sum_probs=41.2
Q ss_pred HHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 168 SLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 168 ~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+++..+++++.....++.+.|.|+||..|.++-++||++|.++++-|+.+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 34556667776544449999999999999999999999999999999654
No 80
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.27 E-value=0.19 Score=50.79 Aligned_cols=93 Identities=25% Similarity=0.302 Sum_probs=63.1
Q ss_pred CCcEEEEeCCCCCc-cccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDI-EWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly~GgEg~~-~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
+.|++||+=|=|=+ ........+...++...|+.||.+..|.--+- ||+. ++.|...=+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~-------------------~~~d~~~a~ 137 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PFPA-------------------ALEDAYAAY 137 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCCc-------------------hHHHHHHHH
Confidence 57877776555433 22222335778999999999999999876553 3333 345544444
Q ss_pred HHHhh---hCCCCCCCEEEEccChhhHHHHHHHHhCC
Q 011907 171 IDLKK---NLTATDSPVVVFGGSYGGMLAAWFRLKYP 204 (475)
Q Consensus 171 ~~~k~---~~~~~~~pwI~fGGSY~G~LAAW~R~kYP 204 (475)
+.+.+ +++....++++.|.|-||.||+.+-+.=-
T Consensus 138 ~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~ 174 (312)
T COG0657 138 RWLRANAAELGIDPSRIAVAGDSAGGHLALALALAAR 174 (312)
T ss_pred HHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHH
Confidence 44443 45666679999999999999999865544
No 81
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=94.21 E-value=0.22 Score=51.98 Aligned_cols=87 Identities=23% Similarity=0.243 Sum_probs=56.4
Q ss_pred CceEEEEeeee--eecCccCCCCccccccCC-CCCCCCChhhHHHHHHHHHHHHhhhCCCCCCC-EEEEccChhhHHHHH
Q 011907 123 KALLVFIEHRY--YGKSIPYGGNKEIAYKNA-STTGYLSSTQALADYASLIIDLKKNLTATDSP-VVVFGGSYGGMLAAW 198 (475)
Q Consensus 123 gA~vv~lEHRy--YG~S~P~~~~~~~~~~st-~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~p-wI~fGGSY~G~LAAW 198 (475)
+--||++..|- .|.|.|-..... ..+.. ....-.|.+.-.+|+..|+++++. .+ .+++|.|+||++|..
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~------~~~~~lvG~S~Gg~ia~~ 163 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPD-TGKPYGSDFPVITIRDWVRAQARLLDALGI------TRLAAVVGGSMGGMQALE 163 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCC-CCCcccCCCCcCCHHHHHHHHHHHHHHhCC------CCceEEEEECHHHHHHHH
Confidence 55799999875 344444221000 00000 011125777777888888876543 25 589999999999999
Q ss_pred HHHhCCCeeEEEEecccc
Q 011907 199 FRLKYPHVAIGALASSAP 216 (475)
Q Consensus 199 ~R~kYP~lv~gavASSAP 216 (475)
+-.+||+.+.+.+.-++.
T Consensus 164 ~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 164 WAIDYPDRVRSALVIASS 181 (379)
T ss_pred HHHhChHhhhEEEEECCC
Confidence 999999998887765543
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=93.79 E-value=0.092 Score=50.88 Aligned_cols=157 Identities=19% Similarity=0.281 Sum_probs=96.5
Q ss_pred CCcEEEE-eCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVY-TGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly-~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
..|-+|| .++-|++..+.. .++.+=.+++-.|+..+-|-||+|.=.+. -+-| +|.++-| +
T Consensus 77 S~pTlLyfh~NAGNmGhr~~---i~~~fy~~l~mnv~ivsYRGYG~S~Gsps--------E~GL-~lDs~av-------l 137 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLP---IARVFYVNLKMNVLIVSYRGYGKSEGSPS--------EEGL-KLDSEAV-------L 137 (300)
T ss_pred CCceEEEEccCCCcccchhh---HHHHHHHHcCceEEEEEeeccccCCCCcc--------ccce-eccHHHH-------H
Confidence 4675555 666677654432 24455677899999999999999974332 1122 4555444 3
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEe----cccccccccCCcCchhhhHHHHHhhhcCChhhHH
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALA----SSAPILNFDNIVSPYSFSNIITQDFRSVSENCYK 246 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavA----SSAPv~a~~~~~df~~y~~~V~~~~~~~~~~C~~ 246 (475)
.++-...-..+++.|+||-|-||+.|--...|.-|.+.|++- +|=|-.+..-+.+ |- + +..+.=|++
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p---~~--~----k~i~~lc~k 208 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP---FP--M----KYIPLLCYK 208 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc---ch--h----hHHHHHHHH
Confidence 444444445678999999999999998888888888877764 2333221110000 11 1 223456999
Q ss_pred HHHHHHHHHHHH-----hcC--CC---cHHHHHHHhhhcC
Q 011907 247 VIKGSWKQIEET-----AKK--PG---GLEKLQKAFRICK 276 (475)
Q Consensus 247 ~i~~a~~~i~~~-----~~~--~~---g~~~Lk~~F~lc~ 276 (475)
++-.+...|.+- +.+ .+ -...++++|.+|+
T Consensus 209 n~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~ 248 (300)
T KOG4391|consen 209 NKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCP 248 (300)
T ss_pred hhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCc
Confidence 888888777631 111 01 1245788888886
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=93.55 E-value=0.35 Score=49.68 Aligned_cols=123 Identities=22% Similarity=0.250 Sum_probs=84.4
Q ss_pred eeeeEEEEeccccCCCCCCCc-EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCC
Q 011907 74 TFQQRYLINDTHWGGSKNNAP-IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNAS 152 (475)
Q Consensus 74 TF~QRY~vn~~~~~~~~~~gP-Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~ 152 (475)
-|.-=.|+.+.. .+-.| |++.-|=||+.+.-.. .| +.+.+.+-|=.+|.+--|-.|.+.-.... -|.+
T Consensus 60 ~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~-r~-L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~---~yh~-- 128 (345)
T COG0429 60 GFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYA-RG-LMRALSRRGWLVVVFHFRGCSGEANTSPR---LYHS-- 128 (345)
T ss_pred CEEEEeeccCcc----ccCCceEEEEeccCCCCcCHHH-HH-HHHHHHhcCCeEEEEecccccCCcccCcc---eecc--
Confidence 444446665533 23456 6777888887653222 34 34556667799999999999986431110 0111
Q ss_pred CCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhh-HHHHHHHHhCCCe-eEEEEeccccc
Q 011907 153 TTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGG-MLAAWFRLKYPHV-AIGALASSAPI 217 (475)
Q Consensus 153 nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G-~LAAW~R~kYP~l-v~gavASSAPv 217 (475)
..| +|++.|..++++.. +..|...+|-|.|| |||-|.-++==+. ..+|++.|+|.
T Consensus 129 ---G~t-----~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 129 ---GET-----EDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred ---cch-----hHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 223 99999999999854 35799999999999 9999998765553 46999999997
No 84
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=93.44 E-value=0.92 Score=49.90 Aligned_cols=107 Identities=10% Similarity=0.028 Sum_probs=65.4
Q ss_pred CCcEEEEeCCCCCccccc---cccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFA---QNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~---~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
..||++.-|-= .--+.. -.++++..+++ .|-.|+.+..|-+|.|...- + +. +-+..++..
T Consensus 188 ~~PlLiVp~~i-~k~yilDL~p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~--------~---~d----dY~~~~i~~ 250 (532)
T TIGR01838 188 KTPLLIVPPWI-NKYYILDLRPQNSLVRWLVE-QGHTVFVISWRNPDASQADK--------T---FD----DYIRDGVIA 250 (532)
T ss_pred CCcEEEECccc-ccceeeecccchHHHHHHHH-CCcEEEEEECCCCCcccccC--------C---hh----hhHHHHHHH
Confidence 46777665521 111111 12456666666 48889999999999864211 1 11 233344555
Q ss_pred HHHHHhhhCCCCCCCEEEEccChhhHHH----HHHH-HhCCCeeEEEEeccccc
Q 011907 169 LIIDLKKNLTATDSPVVVFGGSYGGMLA----AWFR-LKYPHVAIGALASSAPI 217 (475)
Q Consensus 169 Fi~~~k~~~~~~~~pwI~fGGSY~G~LA----AW~R-~kYP~lv~gavASSAPv 217 (475)
.+..+.+.. ...|++++|.|.||+++ |++. .++|+.+.+.+.-.+|+
T Consensus 251 al~~v~~~~--g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~ 302 (532)
T TIGR01838 251 ALEVVEAIT--GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLL 302 (532)
T ss_pred HHHHHHHhc--CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCc
Confidence 566655433 23589999999999985 3444 44588888777777776
No 85
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=93.04 E-value=0.17 Score=53.40 Aligned_cols=51 Identities=25% Similarity=0.372 Sum_probs=41.5
Q ss_pred CChhhHHHHHHHHHHHHhhhCCCCCCCE-EEEccChhhHHHHHHHHhCCCeeEEEEec
Q 011907 157 LSSTQALADYASLIIDLKKNLTATDSPV-VVFGGSYGGMLAAWFRLKYPHVAIGALAS 213 (475)
Q Consensus 157 Lts~QALaD~a~Fi~~~k~~~~~~~~pw-I~fGGSY~G~LAAW~R~kYP~lv~gavAS 213 (475)
.|+++-.+|++.+++++.- .++ +++|+|+||+.|-.+-.+||+.+.+.+.-
T Consensus 141 ~t~~d~~~~~~~ll~~lgi------~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 141 VTILDFVRVQKELIKSLGI------ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CcHHHHHHHHHHHHHHcCC------CCceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 6888888888888765432 255 59999999999999999999999876654
No 86
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=92.97 E-value=0.41 Score=49.38 Aligned_cols=98 Identities=21% Similarity=0.204 Sum_probs=69.9
Q ss_pred CCcEEEEeCCCCCcccccc---ccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQ---NTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~---~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
+.=|++..|+-.-.|.... ...-+.++|++.||.|+..-=|-+|.|+ + ..|.++-..|...
T Consensus 137 ~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~--G--------------~~s~~dLv~~~~a 200 (365)
T PF05677_consen 137 QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST--G--------------PPSRKDLVKDYQA 200 (365)
T ss_pred CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC--C--------------CCCHHHHHHHHHH
Confidence 4444444444433454211 1234789999999999999999999984 2 2345777888888
Q ss_pred HHHHHhhhCCC-CCCCEEEEccChhhHHHHHHHHhCCC
Q 011907 169 LIIDLKKNLTA-TDSPVVVFGGSYGGMLAAWFRLKYPH 205 (475)
Q Consensus 169 Fi~~~k~~~~~-~~~pwI~fGGSY~G~LAAW~R~kYP~ 205 (475)
-++++..+... ....+|++|.|-||+.+|-.-++.+.
T Consensus 201 ~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~ 238 (365)
T PF05677_consen 201 CVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVL 238 (365)
T ss_pred HHHHHHhcccCCChheEEEeeccccHHHHHHHHHhccc
Confidence 89999865443 33579999999999999987777654
No 87
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=92.78 E-value=0.63 Score=45.33 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=38.3
Q ss_pred HHHHHHHHhhhC---CCCCCCEEEEccChhhHHHHHHHHhCC---CeeEEEEeccccccc
Q 011907 166 YASLIIDLKKNL---TATDSPVVVFGGSYGGMLAAWFRLKYP---HVAIGALASSAPILN 219 (475)
Q Consensus 166 ~a~Fi~~~k~~~---~~~~~pwI~fGGSY~G~LAAW~R~kYP---~lv~gavASSAPv~a 219 (475)
+++.|+.+...+ ..+..++|++|+|.||.+|-.+-...+ +.+.+-+.=+.|...
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 333444444444 235679999999999998887776554 478899988999864
No 88
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.05 E-value=0.33 Score=50.18 Aligned_cols=93 Identities=22% Similarity=0.381 Sum_probs=57.8
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCc-c-CCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSI-P-YGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~-P-~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
.-|++|+.| -|.-..++..+ +-.||+ .=.|.++.-=-||.|. | |+.- .+ +.+- .|
T Consensus 90 ~~plVliHG-yGAg~g~f~~N--f~~La~--~~~vyaiDllG~G~SSRP~F~~d------~~------~~e~------~f 146 (365)
T KOG4409|consen 90 KTPLVLIHG-YGAGLGLFFRN--FDDLAK--IRNVYAIDLLGFGRSSRPKFSID------PT------TAEK------EF 146 (365)
T ss_pred CCcEEEEec-cchhHHHHHHh--hhhhhh--cCceEEecccCCCCCCCCCCCCC------cc------cchH------HH
Confidence 356655555 44322222111 457788 5678888888899754 5 4331 11 1111 66
Q ss_pred HHHHhh---hCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEE
Q 011907 170 IIDLKK---NLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIG 209 (475)
Q Consensus 170 i~~~k~---~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~g 209 (475)
++.+.+ ..+. .+-|++|+|+||-|||-..+|||+-|.=
T Consensus 147 vesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~k 187 (365)
T KOG4409|consen 147 VESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEK 187 (365)
T ss_pred HHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhce
Confidence 665542 2222 3899999999999999999999997653
No 89
>PRK11071 esterase YqiA; Provisional
Probab=92.04 E-value=0.6 Score=44.01 Aligned_cols=39 Identities=26% Similarity=0.480 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCC
Q 011907 161 QALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPH 205 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~ 205 (475)
++.+++..+++... ..+++++|.|.||.+|..+-.++|.
T Consensus 46 ~~~~~l~~l~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~ 84 (190)
T PRK11071 46 DAAELLESLVLEHG------GDPLGLVGSSLGGYYATWLSQCFML 84 (190)
T ss_pred HHHHHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHHcCC
Confidence 34555555554322 2489999999999999999999994
No 90
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=91.75 E-value=0.26 Score=51.20 Aligned_cols=103 Identities=21% Similarity=0.245 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCE-EEEccChhhHHHHHHHHhCCCeeE--EEEecccccccccCCcCchhhhHHHHHhhhc
Q 011907 163 LADYASLIIDLKKNLTATDSPV-VVFGGSYGGMLAAWFRLKYPHVAI--GALASSAPILNFDNIVSPYSFSNIITQDFRS 239 (475)
Q Consensus 163 LaD~a~Fi~~~k~~~~~~~~pw-I~fGGSY~G~LAAW~R~kYP~lv~--gavASSAPv~a~~~~~df~~y~~~V~~~~~~ 239 (475)
+.|.++..+.+-..+.- .++ .++|||+|||.|--.-..||+.+. ..+|+|+.+.+. --.|.++..+++..
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~-----~ia~~~~~r~AI~~ 201 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ-----NIAFNEVQRQAIEA 201 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH-----HHHHHHHHHHHHHh
Confidence 45666665555444442 245 489999999999888889999987 566777776542 23566666665542
Q ss_pred CC--------hhhHHHHHHHHHHHHHHh-cCCCcHHHHHHHhhh
Q 011907 240 VS--------ENCYKVIKGSWKQIEETA-KKPGGLEKLQKAFRI 274 (475)
Q Consensus 240 ~~--------~~C~~~i~~a~~~i~~~~-~~~~g~~~Lk~~F~l 274 (475)
-+ ..|.. .++......+. .+-...+++.+.|+-
T Consensus 202 DP~~n~G~Y~~~~~P--~~GL~~AR~l~~ltYrS~~~~~~rF~r 243 (368)
T COG2021 202 DPDWNGGDYYEGTQP--ERGLRLARMLAHLTYRSEEELDERFGR 243 (368)
T ss_pred CCCccCCCccCCCCc--chhHHHHHHHHHHHccCHHHHHHHhcc
Confidence 11 12332 22333333221 123345678888886
No 91
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.06 E-value=0.29 Score=53.96 Aligned_cols=88 Identities=22% Similarity=0.281 Sum_probs=57.0
Q ss_pred hhhcCceEEEEeeeeeec-CccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCC-CCCCEEEEccChhhHHH
Q 011907 119 APKFKALLVFIEHRYYGK-SIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTA-TDSPVVVFGGSYGGMLA 196 (475)
Q Consensus 119 A~~~gA~vv~lEHRyYG~-S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~-~~~pwI~fGGSY~G~LA 196 (475)
-...|-.||.+..|-=-. -.-|. ...+ .++.+.-+|.-++- .+.+..++.. .-.+|.+.|-||||-||
T Consensus 672 LaslGy~Vv~IDnRGS~hRGlkFE----~~ik--~kmGqVE~eDQVeg----lq~Laeq~gfidmdrV~vhGWSYGGYLS 741 (867)
T KOG2281|consen 672 LASLGYVVVFIDNRGSAHRGLKFE----SHIK--KKMGQVEVEDQVEG----LQMLAEQTGFIDMDRVGVHGWSYGGYLS 741 (867)
T ss_pred hhhcceEEEEEcCCCccccchhhH----HHHh--hccCeeeehhhHHH----HHHHHHhcCcccchheeEeccccccHHH
Confidence 345899999999884221 01121 1122 24555555433333 3333344433 23589999999999999
Q ss_pred HHHHHhCCCeeEEEEecccc
Q 011907 197 AWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 197 AW~R~kYP~lv~gavASSAP 216 (475)
+-+-.+||+++..|||+.++
T Consensus 742 lm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 742 LMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred HHHhhcCcceeeEEeccCcc
Confidence 99999999999999997544
No 92
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=91.02 E-value=0.28 Score=54.34 Aligned_cols=143 Identities=19% Similarity=0.254 Sum_probs=90.8
Q ss_pred eEEecCCC-CCCCCCCCCeeeeEEEEecc---------ccCC---CCCCCcEEEEeCCCCCccccccccchh-hchhhhc
Q 011907 57 YHTQILDH-FNYNPQSYQTFQQRYLINDT---------HWGG---SKNNAPIFVYTGNEGDIEWFAQNTGFM-YDVAPKF 122 (475)
Q Consensus 57 ~f~Q~lDH-F~~~~~~~~TF~QRY~vn~~---------~~~~---~~~~gPIfly~GgEg~~~~~~~~~g~~-~~lA~~~ 122 (475)
-.+|+|=- ||+. ..+.+|-|+..+ .|+. -.+.+|++||-=|--.+.. +.+|. ..|.=-=
T Consensus 403 LkqqeV~~g~dp~----~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~---~p~Fs~~~lSLlD 475 (682)
T COG1770 403 LKQQEVPGGFDPE----DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISM---DPSFSIARLSLLD 475 (682)
T ss_pred EEeccCCCCCChh----HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccC---CcCcccceeeeec
Confidence 35676644 7754 489999999822 2220 0246788888666543321 12222 2333333
Q ss_pred CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh
Q 011907 123 KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 123 gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k 202 (475)
.|.|+++-|===|.-+= ..-| ++=|.|+-.....|+-.=.+++.++--.....+++.|||-||||..-.--.
T Consensus 476 RGfiyAIAHVRGGgelG-----~~WY---e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~ 547 (682)
T COG1770 476 RGFVYAIAHVRGGGELG-----RAWY---EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANM 547 (682)
T ss_pred CceEEEEEEeecccccC-----hHHH---HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhh
Confidence 58899998854343221 1111 233677777888886666666655433334579999999999999999999
Q ss_pred CCCeeEEEEecc
Q 011907 203 YPHVAIGALASS 214 (475)
Q Consensus 203 YP~lv~gavASS 214 (475)
-|+++.|+||-+
T Consensus 548 ~P~lf~~iiA~V 559 (682)
T COG1770 548 APDLFAGIIAQV 559 (682)
T ss_pred ChhhhhheeecC
Confidence 999999999855
No 93
>PRK13604 luxD acyl transferase; Provisional
Probab=90.73 E-value=1.4 Score=45.16 Aligned_cols=99 Identities=7% Similarity=-0.080 Sum_probs=63.9
Q ss_pred CcEEEEeCCCCCccccccccchhhchhh---hcCceEEEEeeeee-ecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAP---KFKALLVFIEHRYY-GKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~---~~gA~vv~lEHRyY-G~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
.|+++..-|=+.-. ..+..+|+ +.|-.++...+|-. |+|- ++. +..|+.-...|+..
T Consensus 37 ~~~vIi~HGf~~~~------~~~~~~A~~La~~G~~vLrfD~rg~~GeS~--G~~-----------~~~t~s~g~~Dl~a 97 (307)
T PRK13604 37 NNTILIASGFARRM------DHFAGLAEYLSSNGFHVIRYDSLHHVGLSS--GTI-----------DEFTMSIGKNSLLT 97 (307)
T ss_pred CCEEEEeCCCCCCh------HHHHHHHHHHHHCCCEEEEecCCCCCCCCC--Ccc-----------ccCcccccHHHHHH
Confidence 35566666655421 12333333 67999999999986 9993 332 12222224689988
Q ss_pred HHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 169 LIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 169 Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
-|.++|.+. ..+++++|.|.||+.|.-.....| +.+.++-|+
T Consensus 98 aid~lk~~~---~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp 139 (307)
T PRK13604 98 VVDWLNTRG---INNLGLIAASLSARIAYEVINEID--LSFLITAVG 139 (307)
T ss_pred HHHHHHhcC---CCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCC
Confidence 888888752 247999999999999866655555 555555443
No 94
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=90.59 E-value=0.59 Score=46.34 Aligned_cols=111 Identities=17% Similarity=0.070 Sum_probs=69.2
Q ss_pred CCcEEEEeCCCCCcc-ccccccc------hhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHH
Q 011907 92 NAPIFVYTGNEGDIE-WFAQNTG------FMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALA 164 (475)
Q Consensus 92 ~gPIfly~GgEg~~~-~~~~~~g------~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALa 164 (475)
.-|++|...+-+.-. ....... ...+..-+.|-.+|....|-.|.|- +.. ..+ .++-.+
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~--G~~-----------~~~-~~~e~~ 84 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE--GEF-----------DPM-SPNEAQ 84 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS---S-B------------TT-SHHHHH
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC--Ccc-----------ccC-ChhHHH
Confidence 467888877665311 0010000 1111255689999999999999985 322 111 777789
Q ss_pred HHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 165 DYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 165 D~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
|.+.-|+.+.++ .-.+.+|-++|.||+|..+-..-..-|.-..+.+..+++.
T Consensus 85 D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 85 DGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp HHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred HHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 999999999987 3345589999999999988888774444445555555443
No 95
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=90.23 E-value=0.52 Score=50.12 Aligned_cols=48 Identities=23% Similarity=0.334 Sum_probs=38.3
Q ss_pred HHHHhhhCCC--CCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 170 IIDLKKNLTA--TDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~--~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
+-.+++++.. ....+++.|.||||..|.++-++||++|.++++=|+-+
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3445555543 33578999999999999999999999999888888754
No 96
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=90.10 E-value=0.95 Score=47.87 Aligned_cols=109 Identities=19% Similarity=0.146 Sum_probs=73.3
Q ss_pred CCcEEEEeCCCCCcc-ccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIE-WFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 92 ~gPIfly~GgEg~~~-~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
..|+++.+-|=..-+ .... . .+...|.+-|--+|.+-||--|-|.-+..- -| .+-. -.|+..++
T Consensus 124 ~~P~vvilpGltg~S~~~YV-r-~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr---~f------~ag~----t~Dl~~~v 188 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYV-R-HLVHEAQRKGYRVVVFNHRGLGGSKLTTPR---LF------TAGW----TEDLREVV 188 (409)
T ss_pred CCcEEEEecCCCCCChhHHH-H-HHHHHHHhCCcEEEEECCCCCCCCccCCCc---ee------ecCC----HHHHHHHH
Confidence 458888777653221 1111 1 256789999999999999998887653321 01 1111 17999999
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHH-HhCCCe-eEEEEeccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFR-LKYPHV-AIGALASSAPI 217 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R-~kYP~l-v~gavASSAPv 217 (475)
+++++++ +.+|-..+|-|+||++-.=.- +.=.+. ..||+|=|.|.
T Consensus 189 ~~i~~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 189 NHIKKRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred HHHHHhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 9999987 467999999999998766433 333333 56777767676
No 97
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.99 E-value=0.26 Score=48.47 Aligned_cols=59 Identities=32% Similarity=0.411 Sum_probs=38.7
Q ss_pred CCCCCChhhHHHHHHHHHHHHhhhCC--CCCCCEEEEccChhhHHHHHHH-----HhCCCeeEEEEeccccc
Q 011907 153 TTGYLSSTQALADYASLIIDLKKNLT--ATDSPVVVFGGSYGGMLAAWFR-----LKYPHVAIGALASSAPI 217 (475)
Q Consensus 153 nL~yLts~QALaD~a~Fi~~~k~~~~--~~~~pwI~fGGSY~G~LAAW~R-----~kYP~lv~gavASSAPv 217 (475)
++-.+|.-++|+| .+...+. ..+.||.+||+|+||+||=-.- ...|=...-..+++||.
T Consensus 49 ~ep~~~di~~Lad------~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~ 114 (244)
T COG3208 49 GEPLLTDIESLAD------ELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPH 114 (244)
T ss_pred CCcccccHHHHHH------HHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCC
Confidence 4457777777777 2333332 3678999999999999986543 44553334455667884
No 98
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=89.65 E-value=2.8 Score=41.84 Aligned_cols=101 Identities=19% Similarity=0.283 Sum_probs=72.3
Q ss_pred cEEE-EeCCCCCccccccccchhhchhhhc--CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 94 PIFV-YTGNEGDIEWFAQNTGFMYDVAPKF--KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 94 PIfl-y~GgEg~~~~~~~~~g~~~~lA~~~--gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
++|+ .-||-|-++.+. -|+..|-+.+ +..|+.+-|.-+-.+...... + .+-+..+.++=++=-..|+
T Consensus 3 ~li~~IPGNPGlv~fY~---~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~------~-~~~~~~sL~~QI~hk~~~i 72 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYE---EFLSALYEKLNPQFEILGISHAGHSTSPSNSKF------S-PNGRLFSLQDQIEHKIDFI 72 (266)
T ss_pred EEEEEECCCCChHHHHH---HHHHHHHHhCCCCCeeEEecCCCCcCCcccccc------c-CCCCccCHHHHHHHHHHHH
Confidence 4444 455556555442 3677777774 678888888866554433221 1 4567888888888888888
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCC
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYP 204 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP 204 (475)
+.+..+...++.|+|++|+|-|.-++.-+-.++|
T Consensus 73 ~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 73 KELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred HHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc
Confidence 7776655446789999999999999999999999
No 99
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=89.13 E-value=0.52 Score=49.61 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=23.1
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeee
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYY 134 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyY 134 (475)
.-||+++.=|=+.... ..+.+..+||.+ |..|+++|||+-
T Consensus 99 ~~PvvIFSHGlgg~R~--~yS~~~~eLAS~-GyVV~aieHrDg 138 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRT--SYSAICGELASH-GYVVAAIEHRDG 138 (379)
T ss_dssp -EEEEEEE--TT--TT--TTHHHHHHHHHT-T-EEEEE---SS
T ss_pred CCCEEEEeCCCCcchh--hHHHHHHHHHhC-CeEEEEeccCCC
Confidence 3588888777765432 235577899984 999999999974
No 100
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=88.46 E-value=0.87 Score=48.93 Aligned_cols=58 Identities=19% Similarity=0.193 Sum_probs=44.8
Q ss_pred hhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCee----EEEEecccccc
Q 011907 159 STQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVA----IGALASSAPIL 218 (475)
Q Consensus 159 s~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv----~gavASSAPv~ 218 (475)
.++.++|++.+|+.+.+... ..|++++|+|.||.++..+-.++|+.+ ..-|+=++|..
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 46778999999998876543 469999999999999999999999743 34444455653
No 101
>COG4099 Predicted peptidase [General function prediction only]
Probab=87.81 E-value=3.2 Score=42.30 Aligned_cols=124 Identities=15% Similarity=0.178 Sum_probs=72.8
Q ss_pred CeeeeEEEEeccccCCCCCCCcEEEE--eCCCCCcc---ccccccchhhchhhhcCceEEEEeeeeeecCccCCCCcccc
Q 011907 73 QTFQQRYLINDTHWGGSKNNAPIFVY--TGNEGDIE---WFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIA 147 (475)
Q Consensus 73 ~TF~QRY~vn~~~~~~~~~~gPIfly--~GgEg~~~---~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~ 147 (475)
..-+=|.|+-+.|-. .++--|+.|+ -+|++.-. ....+.|-+....++.+-.|++.. | +--|.+.
T Consensus 172 neLkYrly~Pkdy~p-dkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQ---y--~~if~d~---- 241 (387)
T COG4099 172 NELKYRLYTPKDYAP-DKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQ---Y--NPIFADS---- 241 (387)
T ss_pred ceeeEEEecccccCC-CCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccc---c--ccccccc----
Confidence 356667777666632 2222374444 44454322 222334555566677775555533 1 1113332
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEec
Q 011907 148 YKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALAS 213 (475)
Q Consensus 148 ~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavAS 213 (475)
|+ +=+.--|++-|+.. +.+..+++-..+++-+.|-|.||+.+--+-+||||.|.||+-=
T Consensus 242 ----e~-~t~~~l~~~idli~--~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~i 300 (387)
T COG4099 242 ----EE-KTLLYLIEKIDLIL--EVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPI 300 (387)
T ss_pred ----cc-ccchhHHHHHHHHH--HHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeee
Confidence 23 22233345555332 2455677888889999999999999888889999999998743
No 102
>COG0400 Predicted esterase [General function prediction only]
Probab=87.81 E-value=0.91 Score=43.82 Aligned_cols=56 Identities=21% Similarity=0.297 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 162 ALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 162 ALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
..+.++.|++....++..+..+.|++|-|=|+++|+-.-+++|+++.||++=|+-+
T Consensus 79 ~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 79 ETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 33446667777777777777899999999999999999999999999999877544
No 103
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=87.56 E-value=2.7 Score=43.51 Aligned_cols=120 Identities=20% Similarity=0.386 Sum_probs=75.1
Q ss_pred EEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCc--cCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHh
Q 011907 97 VYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSI--PYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLK 174 (475)
Q Consensus 97 ly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~--P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k 174 (475)
|.|+-||+...+ +-|.| .---+.|-.++-+.|--|+.|. |++-. ...|+.-+..|..+
T Consensus 245 LvIC~EGNAGFY--EvG~m-~tP~~lgYsvLGwNhPGFagSTG~P~p~n---------------~~nA~DaVvQfAI~-- 304 (517)
T KOG1553|consen 245 LVICFEGNAGFY--EVGVM-NTPAQLGYSVLGWNHPGFAGSTGLPYPVN---------------TLNAADAVVQFAIQ-- 304 (517)
T ss_pred EEEEecCCccce--Eeeee-cChHHhCceeeccCCCCccccCCCCCccc---------------chHHHHHHHHHHHH--
Confidence 344446654422 12433 3344688999999999999986 44432 12344445556543
Q ss_pred hhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccccccCCcCchhhhHHHHHhhhcCChhhHHHHHHH
Q 011907 175 KNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGS 251 (475)
Q Consensus 175 ~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~a 251 (475)
.+..+-.-+|++|-|-||--++|+..-||++ +|+|+- + .|.+.+--++..++..-...++.+
T Consensus 305 -~Lgf~~edIilygWSIGGF~~~waAs~YPdV-------kavvLD--A-----tFDDllpLAl~rMP~~~~giV~~a 366 (517)
T KOG1553|consen 305 -VLGFRQEDIILYGWSIGGFPVAWAASNYPDV-------KAVVLD--A-----TFDDLLPLALFRMPTFFSGIVEHA 366 (517)
T ss_pred -HcCCCccceEEEEeecCCchHHHHhhcCCCc-------eEEEee--c-----chhhhhhHHhhhchHHHHHHHHHH
Confidence 3444445699999999999999999999997 566651 2 356666555555654444444433
No 104
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.47 E-value=2.8 Score=41.64 Aligned_cols=100 Identities=17% Similarity=0.284 Sum_probs=75.4
Q ss_pred CcEEEEeCCC-CCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 93 APIFVYTGNE-GDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 93 gPIfly~GgE-g~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
.+++||..|- .++. ...-+...++..++-.++...=|-||.|.=.+.. . .-.||+..--+
T Consensus 60 ~~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE--------~--------n~y~Di~avye 120 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE--------R--------NLYADIKAVYE 120 (258)
T ss_pred ceEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCccc--------c--------cchhhHHHHHH
Confidence 4788888777 4444 2223455788888999999999999999643321 1 33589999899
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASS 214 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASS 214 (475)
.++..++ ++.++|++|.|-|-.-+--.-.++| ..|.|-=|
T Consensus 121 ~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~S 160 (258)
T KOG1552|consen 121 WLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHS 160 (258)
T ss_pred HHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEec
Confidence 9999987 7889999999999887777778899 55555444
No 105
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=87.36 E-value=1.5 Score=47.21 Aligned_cols=115 Identities=21% Similarity=0.230 Sum_probs=65.1
Q ss_pred CCcEEEEeCCCCCcccccc-ccchhhchhhhcCceEEEEeeee--eecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQ-NTGFMYDVAPKFKALLVFIEHRY--YGKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~-~~g~~~~lA~~~gA~vv~lEHRy--YG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
.-||+++|=|-+-...... .......++.+.+..+|.+-.|= +|-- ..++. ..+ +.-.+|-|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl-~~~~~------~~~-----~gN~Gl~Dq~~ 191 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFL-SLGDL------DAP-----SGNYGLLDQRL 191 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH--BSSST------TSH-----BSTHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccc-ccccc------ccC-----chhhhhhhhHH
Confidence 3599999854443322211 11223467788899999999993 2310 01111 100 33456777666
Q ss_pred HHHHHhhhCC---CCCCCEEEEccChhhHHHHHHHHhCCC---eeEEEEeccccccc
Q 011907 169 LIIDLKKNLT---ATDSPVVVFGGSYGGMLAAWFRLKYPH---VAIGALASSAPILN 219 (475)
Q Consensus 169 Fi~~~k~~~~---~~~~pwI~fGGSY~G~LAAW~R~kYP~---lv~gavASSAPv~a 219 (475)
=+++++++.. ....+|.++|.|-||+.+...-.- |. +|..||+-|++...
T Consensus 192 AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 192 ALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--TTS
T ss_pred HHHHHHhhhhhcccCCcceeeeeecccccccceeeec-ccccccccccccccccccc
Confidence 6777777653 334589999999666665555544 64 99999999996543
No 106
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=86.93 E-value=1 Score=42.94 Aligned_cols=57 Identities=23% Similarity=0.269 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 161 QALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
++++=+..||....+. ..+..++++.|-|=||++|.-+-+++|+.+.|+++=|+.+.
T Consensus 85 ~s~~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 3444455566554433 24556899999999999999999999999999999888763
No 107
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=86.78 E-value=2.6 Score=48.46 Aligned_cols=85 Identities=16% Similarity=0.010 Sum_probs=61.3
Q ss_pred hhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCC------------C--CCCC
Q 011907 118 VAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT------------A--TDSP 183 (475)
Q Consensus 118 lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~------------~--~~~p 183 (475)
+--+.|-.||....|-.|.|--.-+ .-..+-.+|...-|+++..+.. + .+.+
T Consensus 274 ~~~~rGYaVV~~D~RGtg~SeG~~~--------------~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGk 339 (767)
T PRK05371 274 YFLPRGFAVVYVSGIGTRGSDGCPT--------------TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGK 339 (767)
T ss_pred HHHhCCeEEEEEcCCCCCCCCCcCc--------------cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCe
Confidence 3334599999999999999853211 1124566788888888874321 1 2469
Q ss_pred EEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 184 VVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 184 wI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
|.++|.||+|.++.+.....|.-..+.++.+|.
T Consensus 340 VGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 340 VAMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred eEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 999999999999999988888777777775543
No 108
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=86.33 E-value=0.89 Score=45.41 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=37.3
Q ss_pred hhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 175 KNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 175 ~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
+++.....+-.++|+||||.++-..-++||+.|.-.++.|.-+.
T Consensus 130 ~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 130 ARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred cccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 34555556799999999999999999999999999998886664
No 109
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.30 E-value=3.4 Score=42.54 Aligned_cols=106 Identities=20% Similarity=0.250 Sum_probs=60.3
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
..||++..| =++-...+.. .+..+++..|-.|+++.==-+|.|.|-+.. ++ -| +.|...-|+
T Consensus 58 ~~pvlllHG-F~~~~~~w~~--~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~---------~~-----y~-~~~~v~~i~ 119 (326)
T KOG1454|consen 58 KPPVLLLHG-FGASSFSWRR--VVPLLSKAKGLRVLAIDLPGHGYSSPLPRG---------PL-----YT-LRELVELIR 119 (326)
T ss_pred CCcEEEecc-ccCCcccHhh--hccccccccceEEEEEecCCCCcCCCCCCC---------Cc-----ee-hhHHHHHHH
Confidence 456666655 3332222222 255777777555666543333322332221 11 12 233333343
Q ss_pred HHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEE---eccccc
Q 011907 172 DLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGAL---ASSAPI 217 (475)
Q Consensus 172 ~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gav---ASSAPv 217 (475)
.+-.++. ..|++++|.||||.+|--+-.+||+.|.+-+ .-..|+
T Consensus 120 ~~~~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~ 166 (326)
T KOG1454|consen 120 RFVKEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPV 166 (326)
T ss_pred HHHHhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccccc
Confidence 3322322 2479999999999999999999999999887 555554
No 110
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=85.86 E-value=1.9 Score=40.65 Aligned_cols=57 Identities=16% Similarity=0.205 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 159 STQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 159 s~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
.+.+-.+|+.|..-+.... .++.+..++|+|||...+...-+.-+..+.-.+.-.+|
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 4666778999999988766 56789999999999999999987745555544333333
No 111
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=85.15 E-value=1 Score=51.57 Aligned_cols=115 Identities=18% Similarity=0.170 Sum_probs=71.7
Q ss_pred CCcEEEE-eCCCCCccccc-cccchhhchhhhcCceEEEEeeeeee---cCccCCCCccccccCCCCCCCCChhhHHHHH
Q 011907 92 NAPIFVY-TGNEGDIEWFA-QNTGFMYDVAPKFKALLVFIEHRYYG---KSIPYGGNKEIAYKNASTTGYLSSTQALADY 166 (475)
Q Consensus 92 ~gPIfly-~GgEg~~~~~~-~~~g~~~~lA~~~gA~vv~lEHRyYG---~S~P~~~~~~~~~~st~nL~yLts~QALaD~ 166 (475)
.=|+++. -||.+...... ...++...++-..|..|+.+.=|.=| ......- ..+|..- =+.|.
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~--------~~~lG~~----ev~D~ 592 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSAL--------PRNLGDV----EVKDQ 592 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHh--------hhhcCCc----chHHH
Confidence 4575554 56665322111 12345566899999999999999543 3322111 1223222 23454
Q ss_pred HHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 167 ASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 167 a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
-.-++.+.+.......++.++|+||||-+++++-.++|.-+.++=++=|||.
T Consensus 593 ~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 593 IEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred HHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 4555555555544567999999999999999999999944444444577873
No 112
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=84.36 E-value=1.5 Score=41.69 Aligned_cols=43 Identities=33% Similarity=0.516 Sum_probs=32.8
Q ss_pred CChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCC
Q 011907 157 LSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPH 205 (475)
Q Consensus 157 Lts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~ 205 (475)
...++|++.+...|...+.+ .|+++|-|.||..|+|+..+|+-
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~------~~~liGSSlGG~~A~~La~~~~~ 82 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPE------NVVLIGSSLGGFYATYLAERYGL 82 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCC------CeEEEEEChHHHHHHHHHHHhCC
Confidence 34677777766666544322 39999999999999999999964
No 113
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=83.20 E-value=1.7 Score=37.93 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=24.3
Q ss_pred CCCEEEEccChhhHHHHHHHHhCCC------eeEEEEeccccc
Q 011907 181 DSPVVVFGGSYGGMLAAWFRLKYPH------VAIGALASSAPI 217 (475)
Q Consensus 181 ~~pwI~fGGSY~G~LAAW~R~kYP~------lv~gavASSAPv 217 (475)
+.++++.|+|-||+||+-+-..+-+ ...-.++-.+|-
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 4689999999999988766544322 345555655554
No 114
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=81.19 E-value=2.6 Score=37.78 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=26.4
Q ss_pred CCCCEEEEccChhhHHHHHHHHhCCC----eeEEEEecccc
Q 011907 180 TDSPVVVFGGSYGGMLAAWFRLKYPH----VAIGALASSAP 216 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R~kYP~----lv~gavASSAP 216 (475)
++.++++.|+|.||++|..+-..++. .....++=.+|
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 56799999999999999887666654 34444444444
No 115
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=80.25 E-value=3.1 Score=44.20 Aligned_cols=111 Identities=17% Similarity=0.147 Sum_probs=65.5
Q ss_pred CCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 91 NNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 91 ~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
+.-|+++++||-..+.... .....+.....|-.++.+|.=--|.|.-.+ + +. + +=...|++-|.
T Consensus 188 ~p~P~VIv~gGlDs~qeD~--~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l------~~-D--~~~l~~aVLd~---- 251 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDL--YRLFRDYLAPRGIAMLTVDMPGQGESPKWP-L------TQ-D--SSRLHQAVLDY---- 251 (411)
T ss_dssp S-EEEEEEE--TTS-GGGG--HHHHHCCCHHCT-EEEEE--TTSGGGTTT--S-------S----CCHHHHHHHHH----
T ss_pred CCCCEEEEeCCcchhHHHH--HHHHHHHHHhCCCEEEEEccCCCcccccCC-C------Cc-C--HHHHHHHHHHH----
Confidence 3579999999986653221 122346667789999999998888873111 1 11 1 11234666552
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILN 219 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~a 219 (475)
+...--....++.++|-|.||..|.=+-...|+-+.|.++-.|||..
T Consensus 252 --L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 252 --LASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH 298 (411)
T ss_dssp --HHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SC
T ss_pred --HhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhh
Confidence 32211113458999999999999998888899999999999999864
No 116
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=79.83 E-value=3.3 Score=39.81 Aligned_cols=46 Identities=22% Similarity=0.196 Sum_probs=32.0
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++++.+......++.++|.|.||-||-.+--+|| .+.+.||.|++.
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 3444443333468999999999999999999999 566666655544
No 117
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=79.09 E-value=3.5 Score=43.51 Aligned_cols=58 Identities=21% Similarity=0.287 Sum_probs=45.3
Q ss_pred ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCe------eEEEEecccccc
Q 011907 158 SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHV------AIGALASSAPIL 218 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~l------v~gavASSAPv~ 218 (475)
..++....+...|+.+.+.. +.|++++|+|+||.++-.|-+..+.- |.+-|+=++|..
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 44566777888887766532 57999999999999999999888653 777777788874
No 118
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=78.96 E-value=4.5 Score=38.84 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHH
Q 011907 164 ADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL 201 (475)
Q Consensus 164 aD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~ 201 (475)
.++...+..++++ .++.++++.|+|.||++|+.+-.
T Consensus 112 ~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 112 NQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLAL 147 (229)
T ss_pred HHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHH
Confidence 3444444444444 25678999999999998876443
No 119
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=78.81 E-value=48 Score=35.88 Aligned_cols=113 Identities=18% Similarity=0.297 Sum_probs=64.4
Q ss_pred EEEeccccCCCCCCCcEEEE-eCCCC--Cccccccccchhh-----------chhhhcCceEEEEeeeeeecCccCCCCc
Q 011907 79 YLINDTHWGGSKNNAPIFVY-TGNEG--DIEWFAQNTGFMY-----------DVAPKFKALLVFIEHRYYGKSIPYGGNK 144 (475)
Q Consensus 79 Y~vn~~~~~~~~~~gPIfly-~GgEg--~~~~~~~~~g~~~-----------~lA~~~gA~vv~lEHRyYG~S~P~~~~~ 144 (475)
||.-..= +.| ...|++|- -||-| .+.....+.|+.. ..+=.--|-|++||. |.+.-
T Consensus 61 Ywf~eS~-~~P-~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~-------PvGvG- 130 (454)
T KOG1282|consen 61 YWFFESE-NNP-ETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ-------PVGVG- 130 (454)
T ss_pred EEEEEcc-CCC-CCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEec-------CCcCC-
Confidence 6665543 332 46897775 67775 1212222222211 112222367788873 65532
Q ss_pred cccccCCC-CCCCCChhhHHHHHHHHHHH-HhhhCCCCCCCEEEEccChhh----HHHHHHHHhC
Q 011907 145 EIAYKNAS-TTGYLSSTQALADYASLIID-LKKNLTATDSPVVVFGGSYGG----MLAAWFRLKY 203 (475)
Q Consensus 145 ~~~~~st~-nL~yLts~QALaD~a~Fi~~-~k~~~~~~~~pwI~fGGSY~G----~LAAW~R~kY 203 (475)
=||++++ .++ .+-++.-.|.-.|... +++--.....++.+.|-||+| +||.-.-...
T Consensus 131 -FSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N 193 (454)
T KOG1282|consen 131 -FSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGN 193 (454)
T ss_pred -ccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcc
Confidence 1343332 233 4557777888777654 554333356799999999999 8888888754
No 120
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=78.72 E-value=4.8 Score=37.45 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=42.5
Q ss_pred HHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH-HhCCCeeEEEEeccccc
Q 011907 165 DYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR-LKYPHVAIGALASSAPI 217 (475)
Q Consensus 165 D~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R-~kYP~lv~gavASSAPv 217 (475)
|+...+..+.+.+...+.++|++|+|.|...++.+- ...+.-+.|++.=|+|-
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--S
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCC
Confidence 566788888888777677999999999999888888 88999999999877764
No 121
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=78.53 E-value=4 Score=33.02 Aligned_cols=72 Identities=17% Similarity=0.122 Sum_probs=43.0
Q ss_pred cccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCC-ChhhH
Q 011907 84 THWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYL-SSTQA 162 (475)
Q Consensus 84 ~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yL-ts~QA 162 (475)
..|.++++...+++++=|=++-..... -+...|| +.|-.|+...||-+|+|.+-. .+. +.++-
T Consensus 7 ~~w~p~~~~k~~v~i~HG~~eh~~ry~--~~a~~L~-~~G~~V~~~D~rGhG~S~g~r-------------g~~~~~~~~ 70 (79)
T PF12146_consen 7 RRWKPENPPKAVVVIVHGFGEHSGRYA--HLAEFLA-EQGYAVFAYDHRGHGRSEGKR-------------GHIDSFDDY 70 (79)
T ss_pred EEecCCCCCCEEEEEeCCcHHHHHHHH--HHHHHHH-hCCCEEEEECCCcCCCCCCcc-------------cccCCHHHH
Confidence 345543222456666665543222211 1233343 478899999999999997411 133 44788
Q ss_pred HHHHHHHHH
Q 011907 163 LADYASLII 171 (475)
Q Consensus 163 LaD~a~Fi~ 171 (475)
+.|+..|++
T Consensus 71 v~D~~~~~~ 79 (79)
T PF12146_consen 71 VDDLHQFIQ 79 (79)
T ss_pred HHHHHHHhC
Confidence 999998873
No 122
>PRK07868 acyl-CoA synthetase; Validated
Probab=78.36 E-value=20 Score=42.51 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=60.3
Q ss_pred CCcEEEEeCCCCCcc-ccc-cccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIE-WFA-QNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 92 ~gPIfly~GgEg~~~-~~~-~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
+-||+|.-|--.... |-. ..++++..|+++ |--++++. +|.|.+-.. . ...+.++-+.++..+
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~-g~~v~~~d---~G~~~~~~~----------~-~~~~l~~~i~~l~~~ 131 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHRA-GLDPWVID---FGSPDKVEG----------G-MERNLADHVVALSEA 131 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHHC-CCEEEEEc---CCCCChhHc----------C-ccCCHHHHHHHHHHH
Confidence 457777776432221 111 123344445443 55788888 465433111 0 124444444444555
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHH-hCCCeeEEEEeccccc
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL-KYPHVAIGALASSAPI 217 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~-kYP~lv~gavASSAPv 217 (475)
+..++.. . ..++.++|.|.||+++.-+-. +.|+.+.+.+.-.+|+
T Consensus 132 l~~v~~~-~--~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 132 IDTVKDV-T--GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred HHHHHHh-h--CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 4444432 2 248999999999999966654 5566787777666665
No 123
>PLN02454 triacylglycerol lipase
Probab=78.07 E-value=6.9 Score=41.70 Aligned_cols=40 Identities=23% Similarity=0.261 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHH
Q 011907 162 ALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL 201 (475)
Q Consensus 162 ALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~ 201 (475)
+-.++-..|+.+++++.....++++.|+|.||+||..+-.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 4444445566666666433346999999999999988753
No 124
>PLN02571 triacylglycerol lipase
Probab=77.59 E-value=3 Score=44.41 Aligned_cols=38 Identities=24% Similarity=0.361 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL 201 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~ 201 (475)
+|.++++..+++..+ ..+.++++.|+|.||+||+.+-.
T Consensus 208 ~qvl~eV~~L~~~y~----~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 208 DQVLNEVGRLVEKYK----DEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHhcC----cccccEEEeccchHHHHHHHHHH
Confidence 788888777765433 23458999999999999988664
No 125
>PLN02310 triacylglycerol lipase
Probab=77.58 E-value=5.4 Score=42.37 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH----HhCCCeeEEEEeccccc
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR----LKYPHVAIGALASSAPI 217 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R----~kYP~lv~gavASSAPv 217 (475)
+|+++.+..++...+. ..++.++++.|+|.||+||..+- ...|..-..++.-.+|-
T Consensus 189 ~qVl~eV~~L~~~y~~--~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPR 248 (405)
T PLN02310 189 EQVMQEVKRLVNFYRG--KGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHhhcc--cCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCC
Confidence 7888776666554432 12456899999999999997665 33565544566666664
No 126
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=77.17 E-value=2.3 Score=40.42 Aligned_cols=94 Identities=18% Similarity=0.208 Sum_probs=57.5
Q ss_pred hhhchhhhcCceEEEEeeeeeecC-ccCCCCccccccCCCCCCCC---ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEcc
Q 011907 114 FMYDVAPKFKALLVFIEHRYYGKS-IPYGGNKEIAYKNASTTGYL---SSTQALADYASLIIDLKKNLTATDSPVVVFGG 189 (475)
Q Consensus 114 ~~~~lA~~~gA~vv~lEHRyYG~S-~P~~~~~~~~~~st~nL~yL---ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGG 189 (475)
....||++ |-.+++..- |.|.. .|.... +.. ..++.+ ..+++.+|+...+..++.+......++.++|-
T Consensus 33 ~ad~lA~~-Gy~v~~pD~-f~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGf 105 (218)
T PF01738_consen 33 LADRLAEE-GYVVLAPDL-FGGRGAPPSDPE--EAF---AAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGF 105 (218)
T ss_dssp HHHHHHHT-T-EEEEE-C-CCCTS--CCCHH--CHH---HHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEE
T ss_pred HHHHHHhc-CCCEEeccc-ccCCCCCccchh--hHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEE
Confidence 34466654 755555443 66665 333221 111 122211 15789999999999998775444569999999
Q ss_pred ChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 190 SYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 190 SY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
|+||.+|..+-...| .+.|+++--+
T Consensus 106 c~GG~~a~~~a~~~~-~~~a~v~~yg 130 (218)
T PF01738_consen 106 CWGGKLALLLAARDP-RVDAAVSFYG 130 (218)
T ss_dssp THHHHHHHHHHCCTT-TSSEEEEES-
T ss_pred ecchHHhhhhhhhcc-ccceEEEEcC
Confidence 999999998888774 4555555443
No 127
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=76.64 E-value=3.7 Score=42.73 Aligned_cols=85 Identities=24% Similarity=0.275 Sum_probs=53.3
Q ss_pred CceEEEEee-eeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCC-CCCCEEEEccChhhH----HH
Q 011907 123 KALLVFIEH-RYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTA-TDSPVVVFGGSYGGM----LA 196 (475)
Q Consensus 123 gA~vv~lEH-RyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~-~~~pwI~fGGSY~G~----LA 196 (475)
.|.||+++. =--|-|.. +..+...-+.+|+..|+..|++.+-..+.. ...|+.++|-||||. +|
T Consensus 85 ~an~l~iD~PvGtGfS~~----------~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a 154 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYG----------NDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALA 154 (415)
T ss_dssp TSEEEEE--STTSTT-EE----------SSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHH
T ss_pred ccceEEEeecCceEEeec----------cccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhH
Confidence 378888873 22333333 222335678899999999999887655543 456999999999995 45
Q ss_pred HHHHHhCC------CeeEEEEeccccc
Q 011907 197 AWFRLKYP------HVAIGALASSAPI 217 (475)
Q Consensus 197 AW~R~kYP------~lv~gavASSAPv 217 (475)
..+...-. =-..|.+-.++-+
T Consensus 155 ~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 155 SYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HhhhhccccccccccccccceecCccc
Confidence 55554442 2355766667655
No 128
>PLN03037 lipase class 3 family protein; Provisional
Probab=75.79 E-value=6.2 Score=43.11 Aligned_cols=56 Identities=23% Similarity=0.340 Sum_probs=38.4
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH----HhCCCe-eEEEEeccccc
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR----LKYPHV-AIGALASSAPI 217 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R----~kYP~l-v~gavASSAPv 217 (475)
+|.++++..++...+.. .++.++++.|+|.||+||...- ...|++ -..++.-.+|-
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPR 358 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPR 358 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCC
Confidence 78999988887665531 2356899999999999998766 345665 23344444553
No 129
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=75.67 E-value=5.8 Score=38.86 Aligned_cols=55 Identities=24% Similarity=0.247 Sum_probs=45.1
Q ss_pred CChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEe
Q 011907 157 LSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALA 212 (475)
Q Consensus 157 Lts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavA 212 (475)
.+..+.++|+...+.+++.+-.....++.++|=|+||.+|--+--+.| .+.|+++
T Consensus 87 ~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~ 141 (236)
T COG0412 87 VDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVA 141 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEE
Confidence 334899999999999999876444568999999999999999999988 5555554
No 130
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=74.76 E-value=6.7 Score=38.25 Aligned_cols=50 Identities=18% Similarity=0.217 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCC----CeeEEEEecccc
Q 011907 164 ADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYP----HVAIGALASSAP 216 (475)
Q Consensus 164 aD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP----~lv~gavASSAP 216 (475)
...+.+.+.+.+.+. .++++.|+|-||+||..+-..-+ +-+..+++--||
T Consensus 69 ~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 344566666665553 26999999999999999887743 456667666666
No 131
>COG0627 Predicted esterase [General function prediction only]
Probab=74.61 E-value=8.6 Score=39.54 Aligned_cols=118 Identities=19% Similarity=0.133 Sum_probs=73.5
Q ss_pred CCCcEEEEeCCCCCccccccccchhhchhhhcCceEEE--EeeeeeecCcc----CCCCccccccCCCCCCCCChhhH--
Q 011907 91 NNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVF--IEHRYYGKSIP----YGGNKEIAYKNASTTGYLSSTQA-- 162 (475)
Q Consensus 91 ~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~--lEHRyYG~S~P----~~~~~~~~~~st~nL~yLts~QA-- 162 (475)
++=||.++.+|++.-++-....+-+...|.+.|..++. .+-||+|+-.+ .+.. .+| |+...|.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~--~sf-------Y~d~~~~~~ 122 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGG--ASF-------YSDWTQPPW 122 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCc--cce-------ecccccCcc
Confidence 35789999999975432222234577899999999999 78899987554 2321 111 3333332
Q ss_pred ---HHHHHHHHH-----HHhhhCCCCC--CCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 163 ---LADYASLII-----DLKKNLTATD--SPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 163 ---LaD~a~Fi~-----~~k~~~~~~~--~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
--+.-.||. .+.+.+.... ..--++|.|+||.=|--+-.|+|+.+..+.|=|+.+
T Consensus 123 ~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 123 ASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred ccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 112222221 1122222222 267889999999999889999998887776667655
No 132
>PLN02761 lipase class 3 family protein
Probab=74.56 E-value=4.1 Score=44.50 Aligned_cols=41 Identities=24% Similarity=0.220 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+|.++.+..++.........++.++++.|+|.||+||...-
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 56776655554433211123456899999999999998765
No 133
>PLN02324 triacylglycerol lipase
Probab=74.47 E-value=4 Score=43.40 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL 201 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~ 201 (475)
+|.++.+..+++ ++...+..+++.|+|.||+||+.+-.
T Consensus 197 eqVl~eV~~L~~----~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLE----LYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHH----HCCCCCceEEEecCcHHHHHHHHHHH
Confidence 677777666554 34333457999999999999987753
No 134
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=73.59 E-value=9.1 Score=38.23 Aligned_cols=40 Identities=28% Similarity=0.378 Sum_probs=26.5
Q ss_pred ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh
Q 011907 158 SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k 202 (475)
|.++..+.+..=|+.+. +..|+++.|-|+||++|--+-.+
T Consensus 46 ~l~~~a~~yv~~Ir~~Q-----P~GPy~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 46 SLDDMAAAYVAAIRRVQ-----PEGPYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CHHHHHHHHHHHHHHhC-----CCCCEEEEeeccccHHHHHHHHH
Confidence 34555555544444322 45699999999999998766543
No 135
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=73.19 E-value=17 Score=43.86 Aligned_cols=93 Identities=12% Similarity=0.055 Sum_probs=58.1
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhc--CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKF--KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~--gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
+.|+|++.|.-|.... +..+++.+ +..++.++-+..|.+.| .--+.++..+|++..
T Consensus 1068 ~~~l~~lh~~~g~~~~-------~~~l~~~l~~~~~v~~~~~~g~~~~~~---------------~~~~l~~la~~~~~~ 1125 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-------FSVLSRYLDPQWSIYGIQSPRPDGPMQ---------------TATSLDEVCEAHLAT 1125 (1296)
T ss_pred CCCeEEecCCCCchHH-------HHHHHHhcCCCCcEEEEECCCCCCCCC---------------CCCCHHHHHHHHHHH
Confidence 3568877776664321 22344444 35566666665554321 112667777777777
Q ss_pred HHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh---CCCeeEEEE
Q 011907 170 IIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK---YPHVAIGAL 211 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k---YP~lv~gav 211 (475)
+..+. +..|.+++|.|+||++|..+..+ .|+.+..-+
T Consensus 1126 i~~~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~ 1165 (1296)
T PRK10252 1126 LLEQQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLG 1165 (1296)
T ss_pred HHhhC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEE
Confidence 66432 24599999999999999988775 566665443
No 136
>PLN02408 phospholipase A1
Probab=73.12 E-value=4.5 Score=42.39 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+|.++.+.++++ ++.....++++.|+|.||+||+.+-
T Consensus 182 ~qVl~eI~~ll~----~y~~~~~sI~vTGHSLGGALAtLaA 218 (365)
T PLN02408 182 EMVREEIARLLQ----SYGDEPLSLTITGHSLGAALATLTA 218 (365)
T ss_pred HHHHHHHHHHHH----hcCCCCceEEEeccchHHHHHHHHH
Confidence 566677665554 3332334799999999999987544
No 137
>PLN02753 triacylglycerol lipase
Probab=72.72 E-value=4.6 Score=44.11 Aligned_cols=40 Identities=28% Similarity=0.369 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+|.++.+..++...+.+ ..++.++++.|+|.||+||..+-
T Consensus 291 eQVl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 291 EQILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGALAILSA 330 (531)
T ss_pred HHHHHHHHHHHHHcccc-cCCCceEEEEccCHHHHHHHHHH
Confidence 67777776666544321 12457899999999999998775
No 138
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=71.92 E-value=7.3 Score=38.48 Aligned_cols=90 Identities=27% Similarity=0.292 Sum_probs=65.3
Q ss_pred hhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhH
Q 011907 115 MYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGM 194 (475)
Q Consensus 115 ~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~ 194 (475)
..+.|.+-|-.|+..|=|--|+|.|... +-...+|+ +=|-.|++.-+..+++-. +..|-..+|+|+||-
T Consensus 49 fA~~a~~~Gf~Vlt~dyRG~g~S~p~~~-------~~~~~~~~--DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGq 117 (281)
T COG4757 49 FAAAAAKAGFEVLTFDYRGIGQSRPASL-------SGSQWRYL--DWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQ 117 (281)
T ss_pred HHHHhhccCceEEEEecccccCCCcccc-------ccCccchh--hhhhcchHHHHHHHHhhC--CCCceEEeeccccce
Confidence 4477888899999999999999999654 22344554 667888888888888754 567999999999997
Q ss_pred HHHHHHHhCCCeeEEEEecccc
Q 011907 195 LAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 195 LAAW~R~kYP~lv~gavASSAP 216 (475)
+...+-+ .|.....++.+|.+
T Consensus 118 a~gL~~~-~~k~~a~~vfG~ga 138 (281)
T COG4757 118 ALGLLGQ-HPKYAAFAVFGSGA 138 (281)
T ss_pred eeccccc-CcccceeeEecccc
Confidence 6554432 33445555555554
No 139
>PLN02802 triacylglycerol lipase
Probab=71.04 E-value=9.4 Score=41.63 Aligned_cols=53 Identities=17% Similarity=0.303 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHH----HHHhCCCe-eEEEEecccc
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAW----FRLKYPHV-AIGALASSAP 216 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW----~R~kYP~l-v~gavASSAP 216 (475)
+|.++++..+++ ++...+..+++.|+|.||+||.. ++...|+. -...+.-.+|
T Consensus 312 eqVl~eV~~Ll~----~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsP 369 (509)
T PLN02802 312 ESVVGEVRRLME----KYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGP 369 (509)
T ss_pred HHHHHHHHHHHH----hCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCC
Confidence 566666555543 34334457999999999999874 44455542 1234444444
No 140
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=71.02 E-value=13 Score=37.51 Aligned_cols=86 Identities=26% Similarity=0.270 Sum_probs=56.4
Q ss_pred chhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCC-CCCCEEEEccChhhHH
Q 011907 117 DVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTA-TDSPVVVFGGSYGGML 195 (475)
Q Consensus 117 ~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~-~~~pwI~fGGSY~G~L 195 (475)
.-+=+.|-.||+-.|--.|. ||.+- -+.-+++-|..+=.+++....+. .+.||+++|.|=||.=
T Consensus 20 ~~~L~~GyaVv~pDY~Glg~--~y~~~-------------~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~A 84 (290)
T PF03583_consen 20 AAWLARGYAVVAPDYEGLGT--PYLNG-------------RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQA 84 (290)
T ss_pred HHHHHCCCEEEecCCCCCCC--cccCc-------------HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHH
Confidence 33446788899988876665 54431 13345566665555555443333 4679999999999988
Q ss_pred HHHHHH----hCCCe---eEEEEeccccc
Q 011907 196 AAWFRL----KYPHV---AIGALASSAPI 217 (475)
Q Consensus 196 AAW~R~----kYP~l---v~gavASSAPv 217 (475)
+.|... --|++ +.|+.+.+.|.
T Consensus 85 a~~AA~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 85 ALWAAELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHHHHHhHHhCcccccceeEEeccCCcc
Confidence 877663 35888 57777766554
No 141
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=69.82 E-value=9.3 Score=38.68 Aligned_cols=59 Identities=22% Similarity=0.275 Sum_probs=45.1
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 151 ASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 151 t~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
.+..+|.|.+|--+++..-..+++-+ .||-+|-.-|+.+=+-|-++||+.+.|-+.=+-
T Consensus 74 p~~y~yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~ 132 (283)
T PF03096_consen 74 PEGYQYPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVNP 132 (283)
T ss_dssp -TT-----HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-
T ss_pred cccccccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEec
Confidence 45778999999999999988888864 599999999999999999999999999987553
No 142
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=67.57 E-value=6.6 Score=40.36 Aligned_cols=87 Identities=20% Similarity=0.106 Sum_probs=51.2
Q ss_pred hcCceEEEEeeeeeecCccCCCCccccccCCCCCCCC-----------ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEcc
Q 011907 121 KFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYL-----------SSTQALADYASLIIDLKKNLTATDSPVVVFGG 189 (475)
Q Consensus 121 ~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yL-----------ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGG 189 (475)
..|..++.++=|-.|...+-... ......-.|+ =-...+.|..+-+..++..-.-...++.+.|+
T Consensus 107 ~~G~~vl~~d~rGqg~~~~d~~~----~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~ 182 (320)
T PF05448_consen 107 AAGYAVLAMDVRGQGGRSPDYRG----SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGG 182 (320)
T ss_dssp HTT-EEEEE--TTTSSSS-B-SS----BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred cCCeEEEEecCCCCCCCCCCccc----cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEee
Confidence 57889999999988832221100 0000111111 11346678777777777542223458999999
Q ss_pred ChhhHHHHHHHHhCCCeeEEEEe
Q 011907 190 SYGGMLAAWFRLKYPHVAIGALA 212 (475)
Q Consensus 190 SY~G~LAAW~R~kYP~lv~gavA 212 (475)
|-||.||++.--..|. |.++++
T Consensus 183 SqGG~lal~~aaLd~r-v~~~~~ 204 (320)
T PF05448_consen 183 SQGGGLALAAAALDPR-VKAAAA 204 (320)
T ss_dssp THHHHHHHHHHHHSST--SEEEE
T ss_pred cCchHHHHHHHHhCcc-ccEEEe
Confidence 9999999999999998 444444
No 143
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=67.20 E-value=11 Score=36.67 Aligned_cols=103 Identities=19% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCCcEEEEe-CCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHH
Q 011907 91 NNAPIFVYT-GNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASL 169 (475)
Q Consensus 91 ~~gPIfly~-GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~F 169 (475)
...|+|++| ||-+-+.... .+--+..-|.+.|-.++..- ||-+ + +--|.+|.+.|+.++
T Consensus 65 ~~~klfIfIHGGYW~~g~rk-~clsiv~~a~~~gY~vasvg---Y~l~-------------~---q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRK-MCLSIVGPAVRRGYRVASVG---YNLC-------------P---QVHTLEQTMTQFTHG 124 (270)
T ss_pred CCccEEEEEecchhhcCchh-cccchhhhhhhcCeEEEEec---cCcC-------------c---ccccHHHHHHHHHHH
Confidence 457877764 6655332211 12234566777776665531 2221 1 345778999999999
Q ss_pred HHHHhhhCCCCCCCEEEEcc-ChhhHHHH--HHHHhCCCeeEEEEecccc
Q 011907 170 IIDLKKNLTATDSPVVVFGG-SYGGMLAA--WFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 170 i~~~k~~~~~~~~pwI~fGG-SY~G~LAA--W~R~kYP~lv~gavASSAP 216 (475)
+.++-+.+ +++++|+||| |-|.-||+ -+|++-|- ++|++-+++.
T Consensus 125 v~filk~~--~n~k~l~~gGHSaGAHLa~qav~R~r~pr-I~gl~l~~Gv 171 (270)
T KOG4627|consen 125 VNFILKYT--ENTKVLTFGGHSAGAHLAAQAVMRQRSPR-IWGLILLCGV 171 (270)
T ss_pred HHHHHHhc--ccceeEEEcccchHHHHHHHHHHHhcCch-HHHHHHHhhH
Confidence 88765543 3567888877 88887775 56777664 4566655553
No 144
>COG1647 Esterase/lipase [General function prediction only]
Probab=65.88 E-value=59 Score=32.02 Aligned_cols=111 Identities=19% Similarity=0.140 Sum_probs=64.2
Q ss_pred CCcEEEEeCCCCCc--cccccccchhhchhh---hcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHH
Q 011907 92 NAPIFVYTGNEGDI--EWFAQNTGFMYDVAP---KFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADY 166 (475)
Q Consensus 92 ~gPIfly~GgEg~~--~~~~~~~g~~~~lA~---~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~ 166 (475)
..|.+|.-|+++-+ ..|..++--+..||+ +.|-.+.+. ||=|.-.|-.++ -=-|.+-=+.|+
T Consensus 6 p~pf~f~~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP--~ypGHG~~~e~f-----------l~t~~~DW~~~v 72 (243)
T COG1647 6 PKPFTFEGGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAP--RYPGHGTLPEDF-----------LKTTPRDWWEDV 72 (243)
T ss_pred CCCeeeccCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecC--CCCCCCCCHHHH-----------hcCCHHHHHHHH
Confidence 45666666665422 233322222333333 336666663 444443332221 122334445554
Q ss_pred HHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccccc
Q 011907 167 ASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNF 220 (475)
Q Consensus 167 a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~a~ 220 (475)
-.=-++++.. ....+.+.|-|.||-+|.|+-..|| ..+.+.=|||+..+
T Consensus 73 ~d~Y~~L~~~---gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k 121 (243)
T COG1647 73 EDGYRDLKEA---GYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVK 121 (243)
T ss_pred HHHHHHHHHc---CCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccc
Confidence 4444455522 2236888899999999999999999 88999999999754
No 145
>PRK04940 hypothetical protein; Provisional
Probab=62.47 E-value=15 Score=34.69 Aligned_cols=54 Identities=9% Similarity=0.120 Sum_probs=35.0
Q ss_pred ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccc
Q 011907 158 SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSA 215 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSA 215 (475)
+.++|++=+...|..+... + ...|++++|-|.||.-|.|+-.+|- ..+.+..-|
T Consensus 38 ~P~~a~~~l~~~i~~~~~~-~-~~~~~~liGSSLGGyyA~~La~~~g--~~aVLiNPA 91 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL-S-DDERPLICGVGLGGYWAERIGFLCG--IRQVIFNPN 91 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc-c-CCCCcEEEEeChHHHHHHHHHHHHC--CCEEEECCC
Confidence 4566766555555432221 1 1247999999999999999999986 355554443
No 146
>PLN02209 serine carboxypeptidase
Probab=61.07 E-value=45 Score=35.91 Aligned_cols=62 Identities=19% Similarity=0.196 Sum_probs=40.8
Q ss_pred CCChhhHHHHHHHHHHHHhhhCC-CCCCCEEEEccChhhH----HHHHHHHhC-----CC-eeEEEEeccccc
Q 011907 156 YLSSTQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGM----LAAWFRLKY-----PH-VAIGALASSAPI 217 (475)
Q Consensus 156 yLts~QALaD~a~Fi~~~k~~~~-~~~~pwI~fGGSY~G~----LAAW~R~kY-----P~-lv~gavASSAPv 217 (475)
+-+.+++.+|+..|++.+=+.+. ..+.|+.++|-||||. +|+.+.+.. |. -..|..-+++-+
T Consensus 140 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 140 RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 34455666999999887544443 2457999999999995 777776543 11 234555566544
No 147
>PLN00413 triacylglycerol lipase
Probab=60.88 E-value=7.5 Score=42.04 Aligned_cols=21 Identities=38% Similarity=0.564 Sum_probs=18.5
Q ss_pred CCCCEEEEccChhhHHHHHHH
Q 011907 180 TDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R 200 (475)
++.++++.|+|.||+||+.+-
T Consensus 282 p~~kliVTGHSLGGALAtLaA 302 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFT 302 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHH
Confidence 467899999999999999865
No 148
>PLN02719 triacylglycerol lipase
Probab=60.60 E-value=11 Score=41.20 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+|.++.+..+++..+. ...++.++++.|+|.||+||+.+-
T Consensus 277 eQVl~eV~rL~~~Ypd-~~ge~~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 277 EQVLTEVKRLVERYGD-EEGEELSITVTGHSLGGALAVLSA 316 (518)
T ss_pred HHHHHHHHHHHHHCCc-ccCCcceEEEecCcHHHHHHHHHH
Confidence 6666665554432221 012345899999999999998755
No 149
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=59.84 E-value=13 Score=38.12 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHHHhhhCC-CCCCCEEEEccChhhH----HHHHHHHh
Q 011907 160 TQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGM----LAAWFRLK 202 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~-~~~~pwI~fGGSY~G~----LAAW~R~k 202 (475)
++| .|+-.|++.+=+.+. ..+.|+-++|-||||. ||...-+.
T Consensus 29 ~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~ 75 (319)
T PLN02213 29 SEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQG 75 (319)
T ss_pred HHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhh
Confidence 455 999998877544443 3678999999999995 66666443
No 150
>PLN02934 triacylglycerol lipase
Probab=59.66 E-value=12 Score=40.76 Aligned_cols=21 Identities=43% Similarity=0.610 Sum_probs=18.7
Q ss_pred CCCCEEEEccChhhHHHHHHH
Q 011907 180 TDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R 200 (475)
++.++++.|+|.||+||+.+-
T Consensus 319 p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred CCCeEEEeccccHHHHHHHHH
Confidence 567999999999999999874
No 151
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=59.15 E-value=13 Score=40.45 Aligned_cols=63 Identities=24% Similarity=0.267 Sum_probs=45.7
Q ss_pred CCCChhhHHHHHHHHHHH--------Hhhh-CCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 155 GYLSSTQALADYASLIID--------LKKN-LTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 155 ~yLts~QALaD~a~Fi~~--------~k~~-~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
.+..-.|+|.|+++=..+ +.+. |..+-..=-..|+|=||-.+--.-++||+.++|.+|+...+
T Consensus 79 ~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 79 SFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred cccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 344667788887665433 2223 33334467789999999999999999999999999976443
No 152
>PLN02162 triacylglycerol lipase
Probab=58.17 E-value=9.9 Score=41.07 Aligned_cols=20 Identities=40% Similarity=0.604 Sum_probs=17.7
Q ss_pred CCCCEEEEccChhhHHHHHH
Q 011907 180 TDSPVVVFGGSYGGMLAAWF 199 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~ 199 (475)
++.++++.|+|.||+||+.+
T Consensus 276 p~~kliVTGHSLGGALAtLa 295 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALF 295 (475)
T ss_pred CCceEEEEecChHHHHHHHH
Confidence 46789999999999999875
No 153
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=58.15 E-value=38 Score=36.87 Aligned_cols=102 Identities=22% Similarity=0.160 Sum_probs=56.7
Q ss_pred CCCcEEEEeCCCC-CccccccccchhhchhhhcCceEEEEeeee--ee---cCccCCCCccccccCCCCCCCCChhhHHH
Q 011907 91 NNAPIFVYTGNEG-DIEWFAQNTGFMYDVAPKFKALLVFIEHRY--YG---KSIPYGGNKEIAYKNASTTGYLSSTQALA 164 (475)
Q Consensus 91 ~~gPIfly~GgEg-~~~~~~~~~g~~~~lA~~~gA~vv~lEHRy--YG---~S~P~~~~~~~~~~st~nL~yLts~QALa 164 (475)
.+.||++||=|=+ .+..-....--...||++-+..+|.+-||= +| -|.=.. +++ ..+| -.|-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~---~~~--~~~n-------~Gl~ 159 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDT---EDA--FASN-------LGLL 159 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccc---ccc--cccc-------ccHH
Confidence 4579999864432 221111111114578999999999999993 12 111000 000 1123 3456
Q ss_pred HHHHHHHHHhhhC---CCCCCCEEEEccChhhHHHHHHHHhCCC
Q 011907 165 DYASLIIDLKKNL---TATDSPVVVFGGSYGGMLAAWFRLKYPH 205 (475)
Q Consensus 165 D~a~Fi~~~k~~~---~~~~~pwI~fGGSY~G~LAAW~R~kYP~ 205 (475)
|...=+++++++. .....-|-+||-|-|++-++++. ..|+
T Consensus 160 DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Ll-a~P~ 202 (491)
T COG2272 160 DQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLL-AVPS 202 (491)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhh-cCcc
Confidence 6555566776653 33334699999998887776654 4454
No 154
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=56.68 E-value=17 Score=39.17 Aligned_cols=46 Identities=22% Similarity=0.193 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCee
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVA 207 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv 207 (475)
+|-|..++.+|+.+-+... ..|+|++++|+||.+.-.|.+.+|...
T Consensus 162 d~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~~~~ 207 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVEAEG 207 (473)
T ss_pred HHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcccccc
Confidence 5677888888876654332 369999999999999999999999975
No 155
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=55.79 E-value=20 Score=34.22 Aligned_cols=53 Identities=23% Similarity=0.329 Sum_probs=40.2
Q ss_pred ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEe
Q 011907 158 SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALA 212 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavA 212 (475)
|.+|.-+|++..|++..++-+ ..++|++|-|+|.-+.-..-.+-|.-...-|+
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~ 98 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRLPAALRARVA 98 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhCCHHHHhhee
Confidence 678999999999999887654 35899999999997666665556654444443
No 156
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=54.92 E-value=51 Score=33.00 Aligned_cols=102 Identities=21% Similarity=0.171 Sum_probs=60.8
Q ss_pred CCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHH
Q 011907 92 NAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLII 171 (475)
Q Consensus 92 ~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~ 171 (475)
+=||+++.+|-.....+ -+.++..+|. +|-.||..+ .|.-.. ....--+++++..|.
T Consensus 16 ~yPVv~f~~G~~~~~s~--Ys~ll~hvAS-hGyIVV~~d--~~~~~~------------------~~~~~~~~~~~~vi~ 72 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSW--YSQLLEHVAS-HGYIVVAPD--LYSIGG------------------PDDTDEVASAAEVID 72 (259)
T ss_pred CcCEEEEeCCcCCCHHH--HHHHHHHHHh-CceEEEEec--ccccCC------------------CCcchhHHHHHHHHH
Confidence 46899999998733322 2334455554 788888877 222111 111122345555555
Q ss_pred HHhhhC----C----CCCCCEEEEccChhhHHHHHHHHhC-----CCeeEEEEeccccc
Q 011907 172 DLKKNL----T----ATDSPVVVFGGSYGGMLAAWFRLKY-----PHVAIGALASSAPI 217 (475)
Q Consensus 172 ~~k~~~----~----~~~~pwI~fGGSY~G~LAAW~R~kY-----P~lv~gavASSAPv 217 (475)
++.+.+ . ..-+++-+.|+|-||=+|.-+-+.. +..+.++++= -||
T Consensus 73 Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~l-DPV 130 (259)
T PF12740_consen 73 WLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILL-DPV 130 (259)
T ss_pred HHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEe-ccc
Confidence 544322 1 2235899999999999998777777 5567666653 355
No 157
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=51.27 E-value=56 Score=33.98 Aligned_cols=128 Identities=19% Similarity=0.235 Sum_probs=67.8
Q ss_pred EEecCCCCCCCCCCCCeeeeEEEEeccccCCCCCCCcEEE-EeCCCCCccc--cccccchhhchhhhcCceEEEEeeeee
Q 011907 58 HTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFV-YTGNEGDIEW--FAQNTGFMYDVAPKFKALLVFIEHRYY 134 (475)
Q Consensus 58 f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~gPIfl-y~GgEg~~~~--~~~~~g~~~~lA~~~gA~vv~lEHRyY 134 (475)
.+-.++.++.-.. +-|...---.. ..-|+++ |.||=.-+.. .....++...+|++.++.+|+.+=|==
T Consensus 64 ~dv~~~~~~~l~v--Rly~P~~~~~~-------~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA 134 (336)
T KOG1515|consen 64 KDVTIDPFTNLPV--RLYRPTSSSSE-------TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA 134 (336)
T ss_pred eeeEecCCCCeEE--EEEcCCCCCcc-------cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC
Confidence 4556677764333 34433322211 2456554 5676654431 222346788999999999998743321
Q ss_pred ecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhh----hCCCCCCCEEEEccChhhHHHHHHHHhC------C
Q 011907 135 GKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKK----NLTATDSPVVVFGGSYGGMLAAWFRLKY------P 204 (475)
Q Consensus 135 G~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~----~~~~~~~pwI~fGGSY~G~LAAW~R~kY------P 204 (475)
=|. ||+- |..|--.=+.++.+ ++...-+++++.|-|-||++|+-.-++- |
T Consensus 135 PEh-~~Pa-------------------~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~ 194 (336)
T KOG1515|consen 135 PEH-PFPA-------------------AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSK 194 (336)
T ss_pred CCC-CCCc-------------------cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCC
Confidence 110 1121 11222111222222 2233345799999999999998775542 3
Q ss_pred CeeEEEEecc
Q 011907 205 HVAIGALASS 214 (475)
Q Consensus 205 ~lv~gavASS 214 (475)
.-+.|.|.=.
T Consensus 195 ~ki~g~ili~ 204 (336)
T KOG1515|consen 195 PKIKGQILIY 204 (336)
T ss_pred cceEEEEEEe
Confidence 4555665544
No 158
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=50.78 E-value=22 Score=34.61 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhC
Q 011907 161 QALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKY 203 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kY 203 (475)
+..+.++.||..+.+.-. .||=++|+|.||++|-|.-+.-
T Consensus 57 ~~~~~l~~fI~~Vl~~TG---akVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 57 ESAKQLRAFIDAVLAYTG---AKVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhhC---CEEEEEEcCCcCHHHHHHHHHc
Confidence 444899999998875432 3999999999999999997644
No 159
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.80 E-value=20 Score=41.05 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=23.9
Q ss_pred EEEEccChhhHHHHHHHHhCCCeeEEEEe----ccccccc
Q 011907 184 VVVFGGSYGGMLAAWFRLKYPHVAIGALA----SSAPILN 219 (475)
Q Consensus 184 wI~fGGSY~G~LAAW~R~kYP~lv~gavA----SSAPv~a 219 (475)
||++|+||||+.|- +-..+|+.+.|+|. =|+|..+
T Consensus 184 VILVGHSMGGiVAr-a~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 184 VILVGHSMGGIVAR-ATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred EEEEeccchhHHHH-HHHhhhhhccchhhhhhhhcCcccC
Confidence 99999999997653 44566766666653 3555543
No 160
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=49.45 E-value=27 Score=37.57 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHhhhCC-CCCCCEEEEccChhhH----HHHHHHHhC-----C-CeeEEEEeccccc
Q 011907 161 QALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGM----LAAWFRLKY-----P-HVAIGALASSAPI 217 (475)
Q Consensus 161 QALaD~a~Fi~~~k~~~~-~~~~pwI~fGGSY~G~----LAAW~R~kY-----P-~lv~gavASSAPv 217 (475)
++.+|+..|++.+=+.+. ....|+.++|-||||. ||..+-..- | =-..|..-+.+.+
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 444899998877543333 2567999999999996 555554332 1 1344656666544
No 161
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=48.26 E-value=24 Score=36.51 Aligned_cols=35 Identities=29% Similarity=0.254 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR 200 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R 200 (475)
+|-.+|+..++...+ +-.+++.|+|.||+||.-+.
T Consensus 155 ~~~~~~~~~L~~~~~------~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP------NYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred HHHHHHHHHHHHhcC------CcEEEEecCChHHHHHHHHH
Confidence 455555444443322 56899999999999998765
No 162
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=43.81 E-value=36 Score=32.69 Aligned_cols=45 Identities=18% Similarity=0.169 Sum_probs=29.5
Q ss_pred CChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHH
Q 011907 157 LSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRL 201 (475)
Q Consensus 157 Lts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~ 201 (475)
-.+++.-..++..|....+.......|++.+|+|.||.++..+-.
T Consensus 53 ~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 53 DGIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hhhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 345554455555555544444433469999999999998876654
No 163
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=41.93 E-value=66 Score=35.09 Aligned_cols=114 Identities=23% Similarity=0.195 Sum_probs=63.9
Q ss_pred CcEEEEeCCCCCcccccc--ccchhhchhhhcCceEEEEeeee--eecCccCCCCccccccCCCCCCCCChhhHHHHHHH
Q 011907 93 APIFVYTGNEGDIEWFAQ--NTGFMYDVAPKFKALLVFIEHRY--YGKSIPYGGNKEIAYKNASTTGYLSSTQALADYAS 168 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~--~~g~~~~lA~~~gA~vv~lEHRy--YG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~ 168 (475)
-||++|+=|.+-...... +......++.+-+..||.+..|= +|- ..+++. . ...|+......+||
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF-~st~d~---~--~~gN~gl~Dq~~AL----- 180 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGF-LSTGDS---A--APGNLGLFDQLLAL----- 180 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceecee-eecCCC---C--CCCcccHHHHHHHH-----
Confidence 699998755542221110 11223345666677788888883 230 011121 0 13577776555554
Q ss_pred HHHHHhh---hCCCCCCCEEEEccChhhHHHHHHHHhCC---CeeEEEEecccccccc
Q 011907 169 LIIDLKK---NLTATDSPVVVFGGSYGGMLAAWFRLKYP---HVAIGALASSAPILNF 220 (475)
Q Consensus 169 Fi~~~k~---~~~~~~~pwI~fGGSY~G~LAAW~R~kYP---~lv~gavASSAPv~a~ 220 (475)
+++++ +++....++.++|+|.||+.+..+-. -| +++..|+.=|+..+..
T Consensus 181 --~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~-Sp~s~~LF~~aI~~SG~~~~~ 235 (545)
T KOG1516|consen 181 --RWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL-SPHSRGLFHKAISMSGNALSP 235 (545)
T ss_pred --HHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc-CHhhHHHHHHHHhhccccccc
Confidence 33443 34444568999999999988765432 12 6777777777776543
No 164
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=40.49 E-value=21 Score=36.36 Aligned_cols=49 Identities=20% Similarity=0.310 Sum_probs=37.3
Q ss_pred HHHHHhhhCCC--CCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 169 LIIDLKKNLTA--TDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 169 Fi~~~k~~~~~--~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++-+++..+.- ....=++.|-|+||..|-|.-+.||+.|-=.++.|+-+
T Consensus 162 LlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 162 LLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred hhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 34455555543 22357899999999999999999999998777777665
No 165
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=40.00 E-value=1.3e+02 Score=30.89 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=58.3
Q ss_pred cEEEEeCCCCCccccccccchhhchhhhc---CceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 94 PIFVYTGNEGDIEWFAQNTGFMYDVAPKF---KALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 94 PIfly~GgEg~~~~~~~~~g~~~~lA~~~---gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
.++|+|||=++-- . ..-++..||+.. +=.||.+.-|- +-.-+.+=+.+|=.+|++.+|
T Consensus 34 ~~llfIGGLtDGl--~-tvpY~~~La~aL~~~~wsl~q~~LsS----------------Sy~G~G~~SL~~D~~eI~~~v 94 (303)
T PF08538_consen 34 NALLFIGGLTDGL--L-TVPYLPDLAEALEETGWSLFQVQLSS----------------SYSGWGTSSLDRDVEEIAQLV 94 (303)
T ss_dssp SEEEEE--TT--T--T--STCHHHHHHHHT-TT-EEEEE--GG----------------GBTTS-S--HHHHHHHHHHHH
T ss_pred cEEEEECCCCCCC--C-CCchHHHHHHHhccCCeEEEEEEecC----------------ccCCcCcchhhhHHHHHHHHH
Confidence 4799999987631 1 122355666655 33455544331 122445677889999999999
Q ss_pred HHHhhhCCC--CCCCEEEEccChhhHHHHHHHHhC-C----CeeEEEEecccccc
Q 011907 171 IDLKKNLTA--TDSPVVVFGGSYGGMLAAWFRLKY-P----HVAIGALASSAPIL 218 (475)
Q Consensus 171 ~~~k~~~~~--~~~pwI~fGGSY~G~LAAW~R~kY-P----~lv~gavASSAPv~ 218 (475)
++++..... ...++|++|+|=|==-...+-.+. | ..+.|+|- =|||-
T Consensus 95 ~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~IL-QApVS 148 (303)
T PF08538_consen 95 EYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAIL-QAPVS 148 (303)
T ss_dssp HHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEE-EEE--
T ss_pred HHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEE-eCCCC
Confidence 999977433 456999999999865555444443 2 56889888 45664
No 166
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.98 E-value=9.4 Score=36.05 Aligned_cols=114 Identities=18% Similarity=0.207 Sum_probs=69.2
Q ss_pred CCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHH
Q 011907 91 NNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLI 170 (475)
Q Consensus 91 ~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi 170 (475)
.|.||+++-...|....+. +.|.+..+|...-+-.|.| |-- +.+..+||-.+ ---+.+||=.--|++.
T Consensus 25 aG~pVvvFpts~Grf~eye-d~G~v~ala~fie~G~vQl----ft~----~gldsESf~a~---h~~~adr~~rH~Ayer 92 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYE-DFGMVDALASFIEEGLVQL----FTL----SGLDSESFLAT---HKNAADRAERHRAYER 92 (227)
T ss_pred CCCcEEEEecCCCcchhhh-hcccHHHHHHHHhcCcEEE----EEe----cccchHhHhhh---cCCHHHHHHHHHHHHH
Confidence 5899999977666554333 4677888888776655553 211 12211222110 0112233333233332
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILN 219 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~a 219 (475)
++..+.- +. .-|+-|+|.||-.|+=|-.++||++.+.||=|++--+
T Consensus 93 -Yv~eEal-pg-s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 93 -YVIEEAL-PG-STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred -HHHHhhc-CC-CccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 2222221 22 3788999999999999999999999999999998643
No 167
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=39.87 E-value=27 Score=37.12 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=31.9
Q ss_pred CCCCCC----ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChh
Q 011907 152 STTGYL----SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYG 192 (475)
Q Consensus 152 ~nL~yL----ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~ 192 (475)
++|||. |.||.-+|+.+.|++..+.-+ ..+++++|-|.|
T Consensus 294 dsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfG 336 (456)
T COG3946 294 DSLRYFWSERTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFG 336 (456)
T ss_pred ehhhhhhccCCHHHHHHHHHHHHHHHHHhhC--cceEEEEeeccc
Confidence 466664 789999999999999887544 358999999998
No 168
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=39.57 E-value=53 Score=36.18 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=42.0
Q ss_pred HHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccc
Q 011907 166 YASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPIL 218 (475)
Q Consensus 166 ~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~ 218 (475)
.+.|++.+..-..... |.+++|--=||=.++-+-..+|+++--.+...||+-
T Consensus 125 e~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 125 EAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred HHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 4567777776543223 899999999999999999999999988888888883
No 169
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=38.98 E-value=30 Score=29.27 Aligned_cols=20 Identities=45% Similarity=0.519 Sum_probs=11.5
Q ss_pred CchhhHHHHHHHHHHHHHHHh
Q 011907 1 MATRFIFLSFCLLFSSTLTIS 21 (475)
Q Consensus 1 ~~~~~~~~~~~l~~~~~~~~~ 21 (475)
|| +=++|||.|+|.++|.||
T Consensus 1 Ma-SK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAALLLIS 20 (95)
T ss_pred Cc-hhHHHHHHHHHHHHHHHH
Confidence 77 444555555555555555
No 170
>KOG3111 consensus D-ribulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism]
Probab=37.96 E-value=39 Score=32.43 Aligned_cols=13 Identities=46% Similarity=1.114 Sum_probs=10.2
Q ss_pred HHHHHHhCCCeeE
Q 011907 196 AAWFRLKYPHVAI 208 (475)
Q Consensus 196 AAW~R~kYP~lv~ 208 (475)
.-|.|.|||++..
T Consensus 160 V~~lR~kyp~l~i 172 (224)
T KOG3111|consen 160 VEWLREKYPNLDI 172 (224)
T ss_pred HHHHHHhCCCceE
Confidence 5688888888765
No 171
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=37.53 E-value=1.4e+02 Score=33.18 Aligned_cols=85 Identities=9% Similarity=0.033 Sum_probs=57.2
Q ss_pred hhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhH
Q 011907 115 MYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGM 194 (475)
Q Consensus 115 ~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~ 194 (475)
+.+.+-+.|-.|+.+.-|. |.. ..++++.+.=+..+..-++.+++.-. ..++.++|.+.||.
T Consensus 239 lVr~lv~qG~~VflIsW~n-----P~~-----------~~r~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGt 300 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRN-----PDK-----------AHREWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGL 300 (560)
T ss_pred HHHHHHHcCCeEEEEeCCC-----CCh-----------hhcCCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchH
Confidence 4566667899999999887 322 23567766666555555555554322 34799999999999
Q ss_pred HHHH----HHHhCCC-eeEEEEeccccc
Q 011907 195 LAAW----FRLKYPH-VAIGALASSAPI 217 (475)
Q Consensus 195 LAAW----~R~kYP~-lv~gavASSAPv 217 (475)
|++- +..++|+ -+...+-=-+|+
T Consensus 301 l~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 301 TCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred HHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 8885 8888996 466555444455
No 172
>PF03283 PAE: Pectinacetylesterase
Probab=37.36 E-value=1.4e+02 Score=31.26 Aligned_cols=47 Identities=32% Similarity=0.449 Sum_probs=28.8
Q ss_pred HHHhhhCCCCCC-CEEEEccChhhH----HHHHHHHhCC-CeeEEEEecccccc
Q 011907 171 IDLKKNLTATDS-PVVVFGGSYGGM----LAAWFRLKYP-HVAIGALASSAPIL 218 (475)
Q Consensus 171 ~~~k~~~~~~~~-pwI~fGGSY~G~----LAAW~R~kYP-~lv~gavASSAPv~ 218 (475)
.+++.+ ..++. .+|+.|+|-||. .+-++|..+| ..-.-.++-|+..+
T Consensus 145 ~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 145 DDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred HHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 334444 33333 566666666652 2446789999 56667777788775
No 173
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=36.29 E-value=1.8e+02 Score=26.07 Aligned_cols=23 Identities=35% Similarity=0.543 Sum_probs=19.0
Q ss_pred CCCEEEEccChhhHHHHHHHHhC
Q 011907 181 DSPVVVFGGSYGGMLAAWFRLKY 203 (475)
Q Consensus 181 ~~pwI~fGGSY~G~LAAW~R~kY 203 (475)
..|++++|.|+||.+|..+-.+.
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHH
Confidence 46899999999999996666653
No 174
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus (Caulobacter vibrioides) (Q9AAT9 from SWISSPROT). These proteins may be related to IPR001910 from INTERPRO.; PDB: 2YHG_A.
Probab=36.27 E-value=50 Score=33.05 Aligned_cols=50 Identities=22% Similarity=0.198 Sum_probs=25.7
Q ss_pred ChhhHHHHHHHHHHHHh-hhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEE
Q 011907 158 SSTQALADYASLIIDLK-KNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGA 210 (475)
Q Consensus 158 ts~QALaD~a~Fi~~~k-~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~ga 210 (475)
|..|||-|+..=...-. +.+ -.|..++.-|-.=.-.+|+|..||+++.=.
T Consensus 127 tlAqAL~~i~~~~~~~~~~~~---~~Klrvy~I~dQDdtg~wIr~~fP~l~yI~ 177 (260)
T PF07632_consen 127 TLAQALWDIKETRSPEEAARF---VSKLRVYSISDQDDTGAWIRKNFPDLFYIE 177 (260)
T ss_dssp HHHHHHHHHHHHS-HHHHHHH---HHTEEEEEES--SHHHHHHHHH-TTSEEEE
T ss_pred HHHHHHHHHHHhcCHHHHHHH---HhhEEEEeccCCcchhhHHHHhCCCeEEEE
Confidence 56888888332111100 000 014444444444345999999999998654
No 175
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=34.87 E-value=68 Score=30.37 Aligned_cols=52 Identities=27% Similarity=0.318 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHH-HhCCCeeEEEEeccccc
Q 011907 165 DYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR-LKYPHVAIGALASSAPI 217 (475)
Q Consensus 165 D~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R-~kYP~lv~gavASSAPv 217 (475)
+++..+..+.+.++....|+|++++|.|..+++-+- ++-+ -+.||+.=+.|=
T Consensus 42 ~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~-~V~GalLVAppd 94 (181)
T COG3545 42 VLDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQR-QVAGALLVAPPD 94 (181)
T ss_pred CHHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHHhhhh-ccceEEEecCCC
Confidence 345566667777666677999999999998877544 4444 777887755543
No 176
>PLN02847 triacylglycerol lipase
Probab=34.51 E-value=44 Score=37.33 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=24.1
Q ss_pred CCCCEEEEccChhhHHHHHHHH------hCCCeeEEEEe
Q 011907 180 TDSPVVVFGGSYGGMLAAWFRL------KYPHVAIGALA 212 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R~------kYP~lv~gavA 212 (475)
++-++|+.|+|.||++||.+-. .+|.+..=+.|
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFg 287 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFA 287 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEec
Confidence 5679999999999999887543 36765544444
No 177
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.25 E-value=29 Score=35.05 Aligned_cols=118 Identities=15% Similarity=0.147 Sum_probs=68.4
Q ss_pred CeeeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCC
Q 011907 73 QTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNAS 152 (475)
Q Consensus 73 ~TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~ 152 (475)
+|=.-|.++- ++-+|+=|.+.|-|+-.++. .-....--.+-|-.-+.||.-|||+-+|+... -.
T Consensus 100 ~~A~~~~liP-------QK~~~KOG~~a~tgdh~y~r--r~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~-------~~ 163 (371)
T KOG1551|consen 100 RTARVAWLIP-------QKMADLCLSWALTGDHVYTR--RLVLSKPINKREIATMVLEKPFYGQRVPEEQI-------IH 163 (371)
T ss_pred cceeeeeecc-------cCcCCeeEEEeecCCceeEe--eeeecCchhhhcchheeeecccccccCCHHHH-------HH
Confidence 5666666653 34689888888887765432 11112222233444567899999999997642 12
Q ss_pred CCCCCChh--hHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCe
Q 011907 153 TTGYLSST--QALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHV 206 (475)
Q Consensus 153 nL~yLts~--QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~l 206 (475)
.|.|.|-- ---|-+++|.+.+.-.-...-.|.-+.|-|.||-+|.-.--.+|.-
T Consensus 164 ~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P 219 (371)
T KOG1551|consen 164 MLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP 219 (371)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC
Confidence 44454211 1112245555544431111235899999999999998776655543
No 178
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=31.13 E-value=56 Score=33.34 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=27.7
Q ss_pred CCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 180 TDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++..+++.|+|.||++|+.+-..|- .-+||-++|=
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPG 308 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPG 308 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC---CceEEecCch
Confidence 6889999999999999999988773 3345556664
No 179
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=31.13 E-value=56 Score=33.34 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=27.7
Q ss_pred CCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 180 TDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
++..+++.|+|.||++|+.+-..|- .-+||-++|=
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPG 308 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPG 308 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC---CceEEecCch
Confidence 6889999999999999999988773 3345556664
No 180
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=29.70 E-value=79 Score=35.51 Aligned_cols=41 Identities=24% Similarity=0.097 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh
Q 011907 160 TQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 160 ~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k 202 (475)
+|-...+...|+.+.+.. .+.|||++|+|+||.++-.|-.+
T Consensus 193 d~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 193 DQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred hHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHh
Confidence 566666777777665432 14699999999999998887654
No 181
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=28.12 E-value=38 Score=30.98 Aligned_cols=20 Identities=35% Similarity=0.468 Sum_probs=17.1
Q ss_pred CEEEEccChhhHHHHHHHHh
Q 011907 183 PVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 183 pwI~fGGSY~G~LAAW~R~k 202 (475)
++|++||+++|+.||..-.+
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~ 20 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELAR 20 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHH
T ss_pred CEEEEecHHHHHHHHHHHhc
Confidence 47999999999999987763
No 182
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=27.87 E-value=44 Score=37.55 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=45.1
Q ss_pred CCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccc
Q 011907 156 YLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP 216 (475)
Q Consensus 156 yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAP 216 (475)
.+.-...++|+-.=++++-.+--....+--+.|||-||.|+|-.--..|+|+-+|+|--+.
T Consensus 523 lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 523 LAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred hhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 4445566777665555554332224458899999999999999999999999999885543
No 183
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=27.74 E-value=2.1e+02 Score=29.22 Aligned_cols=97 Identities=15% Similarity=0.271 Sum_probs=58.9
Q ss_pred EEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCcc-CCCCccccccCCCCCCCCChhhHHHHHHHHHHHH
Q 011907 95 IFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIP-YGGNKEIAYKNASTTGYLSSTQALADYASLIIDL 173 (475)
Q Consensus 95 Ifly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P-~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~ 173 (475)
|+-+.|-.|.=..|- ++...-.+.| =|+-|--.| |+-. ..-+.++|-+. +-+.|...+
T Consensus 38 Vv~~hGsPGSH~DFk----Yi~~~l~~~~-------iR~I~iN~PGf~~t-----~~~~~~~~~n~-----er~~~~~~l 96 (297)
T PF06342_consen 38 VVAFHGSPGSHNDFK----YIRPPLDEAG-------IRFIGINYPGFGFT-----PGYPDQQYTNE-----ERQNFVNAL 96 (297)
T ss_pred EEEecCCCCCccchh----hhhhHHHHcC-------eEEEEeCCCCCCCC-----CCCcccccChH-----HHHHHHHHH
Confidence 666788777533221 1222223333 377787777 4432 02234555554 445666666
Q ss_pred hhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEec
Q 011907 174 KKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALAS 213 (475)
Q Consensus 174 k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavAS 213 (475)
-.++... .+.|.+|+|.|+--|.-+-...|-...+-++|
T Consensus 97 l~~l~i~-~~~i~~gHSrGcenal~la~~~~~~g~~lin~ 135 (297)
T PF06342_consen 97 LDELGIK-GKLIFLGHSRGCENALQLAVTHPLHGLVLINP 135 (297)
T ss_pred HHHcCCC-CceEEEEeccchHHHHHHHhcCccceEEEecC
Confidence 6666554 58999999999999999999998554444443
No 184
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=27.13 E-value=1e+02 Score=28.81 Aligned_cols=88 Identities=16% Similarity=0.139 Sum_probs=57.7
Q ss_pred hchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCC-ChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhH
Q 011907 116 YDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYL-SSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGM 194 (475)
Q Consensus 116 ~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yL-ts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~ 194 (475)
..++++.|+..+.++ |--.|-.- ....|. +..+..+++...|+....+ .+++++|+.|-|=|++
T Consensus 29 ~~l~~~~g~~~~~~~----~V~YpA~~---------~~~~y~~S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~ 93 (179)
T PF01083_consen 29 DALQAQPGGTSVAVQ----GVEYPASL---------GPNSYGDSVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAM 93 (179)
T ss_dssp HHHHHHCTTCEEEEE----E--S---S---------CGGSCHHHHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHH
T ss_pred HHHHhhcCCCeeEEE----ecCCCCCC---------CcccccccHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccH
Confidence 467788887766544 33233221 111344 4588889999988877665 4678999999999999
Q ss_pred HHHHHHHh------CCCeeEEEEecccccc
Q 011907 195 LAAWFRLK------YPHVAIGALASSAPIL 218 (475)
Q Consensus 195 LAAW~R~k------YP~lv~gavASSAPv~ 218 (475)
.+..+... ..+-+.|++.=.-|..
T Consensus 94 V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 94 VVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 99888655 4556666666666654
No 185
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=25.44 E-value=2.1e+02 Score=29.22 Aligned_cols=35 Identities=11% Similarity=0.245 Sum_probs=26.4
Q ss_pred CcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeee
Q 011907 93 APIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHR 132 (475)
Q Consensus 93 gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHR 132 (475)
.+|++.+|.-|.- .+.+...||+++|+.+|....+
T Consensus 4 ~~~i~i~GptgsG-----Kt~la~~la~~~~~~iis~Ds~ 38 (307)
T PRK00091 4 PKVIVIVGPTASG-----KTALAIELAKRLNGEIISADSM 38 (307)
T ss_pred ceEEEEECCCCcC-----HHHHHHHHHHhCCCcEEecccc
Confidence 4678888866532 3446679999999999998886
No 186
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=25.40 E-value=1.8e+02 Score=28.82 Aligned_cols=70 Identities=19% Similarity=0.129 Sum_probs=50.4
Q ss_pred hhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHH
Q 011907 120 PKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWF 199 (475)
Q Consensus 120 ~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~ 199 (475)
+++|-.++-+.-|-=|+|.- +. .--|.+++- +|+...++++... ...==|++|+|-||..+--+
T Consensus 59 e~~gis~fRfDF~GnGeS~g--sf------~~Gn~~~ea-----dDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~y 122 (269)
T KOG4667|consen 59 EKEGISAFRFDFSGNGESEG--SF------YYGNYNTEA-----DDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLY 122 (269)
T ss_pred HhcCceEEEEEecCCCCcCC--cc------ccCcccchH-----HHHHHHHHHhccC---ceEEEEEEeecCccHHHHHH
Confidence 45788888888888888863 21 112333432 8999999888752 11223678999999999999
Q ss_pred HHhCCC
Q 011907 200 RLKYPH 205 (475)
Q Consensus 200 R~kYP~ 205 (475)
..||++
T Consensus 123 a~K~~d 128 (269)
T KOG4667|consen 123 ASKYHD 128 (269)
T ss_pred HHhhcC
Confidence 999999
No 187
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=25.07 E-value=1.7e+02 Score=30.14 Aligned_cols=78 Identities=13% Similarity=0.191 Sum_probs=56.9
Q ss_pred CCCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccccccCCcCchhhhH
Q 011907 152 STTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSN 231 (475)
Q Consensus 152 ~nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~a~~~~~df~~y~~ 231 (475)
+...|-|.||--+|+..-..+++-+ -+|-+|-.-|..+-|-|.+++|+.|.|-|-=+.--.+. ..+ -|.|..
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~-gwi-ew~~~K 169 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK-GWI-EWAYNK 169 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc-hHH-HHHHHH
Confidence 5678999999888877777776644 59999999999999999999999999988654332221 122 255666
Q ss_pred HHHHhh
Q 011907 232 IITQDF 237 (475)
Q Consensus 232 ~V~~~~ 237 (475)
.+++-+
T Consensus 170 ~~s~~l 175 (326)
T KOG2931|consen 170 VSSNLL 175 (326)
T ss_pred HHHHHH
Confidence 554433
No 188
>PRK14758 hypothetical protein; Provisional
Probab=24.85 E-value=1e+02 Score=19.86 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHHHHHHhh
Q 011907 4 RFIFLSFCLLFSSTLTISN 22 (475)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~ 22 (475)
.|-++|+.|.+|++.+.++
T Consensus 6 rFEliLivlIlCalia~~f 24 (27)
T PRK14758 6 RFEFILIILILCALIAARF 24 (27)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3556777777888877764
No 189
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=24.42 E-value=4.2e+02 Score=27.81 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=61.2
Q ss_pred ChhhHHHHHHHHHHH-HhhhCCCC-CCCEEEEccChhhHHHHHHHHhCCCeeEEEEecccccccccCCcCchhhhHHHHH
Q 011907 158 SSTQALADYASLIID-LKKNLTAT-DSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQ 235 (475)
Q Consensus 158 ts~QALaD~a~Fi~~-~k~~~~~~-~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv~a~~~~~df~~y~~~V~~ 235 (475)
|.+||- +...+|+. +...+... +.-=|++|||=--..+.-+. .=|+ ++|.+-++|-+ |...|.+++..
T Consensus 188 s~~~~~-~~~~~Ir~~l~~~~~~~~~~v~ILYGGSV~~~N~~~l~-~~~~-iDG~LVG~asl-------~~~~f~~Ii~~ 257 (355)
T PRK14905 188 SAEYAD-EKHAIIKQCLFELFAEESKKIPVLYGGSVNLENANELI-MKPH-IDGLFIGRSAW-------DAQCFHALIAD 257 (355)
T ss_pred CHHHHH-HHHHHHHHHHHHHhccccCceeEEEeCcCCHHHHHHHh-cCCC-CCEEEechhhc-------cHHHHHHHHHH
Confidence 445554 44445554 45444322 11248899988766666553 2344 68999999987 34467776654
Q ss_pred hhhcCCh-hhHHHHHHHHHHHHHHhcCCCcHHHHHHHhhhcC
Q 011907 236 DFRSVSE-NCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK 276 (475)
Q Consensus 236 ~~~~~~~-~C~~~i~~a~~~i~~~~~~~~g~~~Lk~~F~lc~ 276 (475)
..+.... .---.|++--+...+++..-+|.+.|++.-+ |-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~a~~ii~~lGG~~NI~~v~~-C~ 298 (355)
T PRK14905 258 ALKALAGSKIDPIIHKFSEIAIQLIDHLGGKDNISALTH-CA 298 (355)
T ss_pred HHHhccCCcccHHHHhHHHHHHHHHHHhCCHHhhccchh-hh
Confidence 4333332 2333444433344555656678888888766 53
No 190
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=23.42 E-value=1e+02 Score=30.71 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHhC
Q 011907 164 ADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKY 203 (475)
Q Consensus 164 aD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kY 203 (475)
+=+..-++.+++++.. ..+=++|+|+||+.+..+-.+|
T Consensus 87 ~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~ 124 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENY 124 (255)
T ss_dssp HHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHh
Confidence 3355556667777653 4688999999999999887774
No 191
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=23.16 E-value=85 Score=30.66 Aligned_cols=104 Identities=20% Similarity=0.166 Sum_probs=62.6
Q ss_pred cEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHHH---HHHH
Q 011907 94 PIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALADY---ASLI 170 (475)
Q Consensus 94 PIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD~---a~Fi 170 (475)
-|+++.|.=|.-+...- -.+..+-+...-.||++.-|-||.|+|-+-- | - ++--..|. ..+.
T Consensus 44 ~iLlipGalGs~~tDf~--pql~~l~k~l~~TivawDPpGYG~SrPP~Rk----f----~-----~~ff~~Da~~avdLM 108 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDFP--PQLLSLFKPLQVTIVAWDPPGYGTSRPPERK----F----E-----VQFFMKDAEYAVDLM 108 (277)
T ss_pred eeEecccccccccccCC--HHHHhcCCCCceEEEEECCCCCCCCCCCccc----c----h-----HHHHHHhHHHHHHHH
Confidence 36666665554321110 0134555666688999999999999994421 1 1 11112222 2233
Q ss_pred HHHhhhCCCCCCCEEEEccChhhHHHHHHHHhCCCeeE--EEEecccccc
Q 011907 171 IDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAI--GALASSAPIL 218 (475)
Q Consensus 171 ~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~kYP~lv~--gavASSAPv~ 218 (475)
+.+|. .|+-+.|-|=||.-|....-|||+-|. ..|+..|-|.
T Consensus 109 ~aLk~------~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn 152 (277)
T KOG2984|consen 109 EALKL------EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN 152 (277)
T ss_pred HHhCC------CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceec
Confidence 33332 489999999999988888888988665 4455555553
No 192
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=22.22 E-value=2.5e+02 Score=29.91 Aligned_cols=91 Identities=19% Similarity=0.120 Sum_probs=49.4
Q ss_pred hchhhhcCceEEEEeeeeeecCccCCCCccccccCCCCCCCCChhhHHHH----------------HHHHHHHHhhhCCC
Q 011907 116 YDVAPKFKALLVFIEHRYYGKSIPYGGNKEIAYKNASTTGYLSSTQALAD----------------YASLIIDLKKNLTA 179 (475)
Q Consensus 116 ~~lA~~~gA~vv~lEHRyYG~S~P~~~~~~~~~~st~nL~yLts~QALaD----------------~a~Fi~~~k~~~~~ 179 (475)
.++| +.|-.++++.-+.+|+..+-... ..++-..-|+|+= .-.-+.+++..-..
T Consensus 154 ~~LA-k~GYVvla~D~~g~GER~~~e~~---------~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeV 223 (390)
T PF12715_consen 154 DQLA-KRGYVVLAPDALGFGERGDMEGA---------AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEV 223 (390)
T ss_dssp HHHH-TTTSEEEEE--TTSGGG-SSCCC---------TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTE
T ss_pred HHHH-hCCCEEEEEcccccccccccccc---------ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCccc
Confidence 3555 57999999999999997764321 0011111233322 11123333322222
Q ss_pred CCCCEEEEccChhhHHHHHHHHhCCCeeEEEEeccccc
Q 011907 180 TDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPI 217 (475)
Q Consensus 180 ~~~pwI~fGGSY~G~LAAW~R~kYP~lv~gavASSAPv 217 (475)
...++.++|-|.||..+-|+-..-|.+ .++++++...
T Consensus 224 D~~RIG~~GfSmGg~~a~~LaALDdRI-ka~v~~~~l~ 260 (390)
T PF12715_consen 224 DPDRIGCMGFSMGGYRAWWLAALDDRI-KATVANGYLC 260 (390)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHH-TT---EEEEES-B-
T ss_pred CccceEEEeecccHHHHHHHHHcchhh-HhHhhhhhhh
Confidence 345899999999999988888888877 6666666554
No 193
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.99 E-value=5.5e+02 Score=26.02 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=51.5
Q ss_pred eeeeEEEEeccccCCCCCCCcEEEEeCCCCCccccccccchhhchhhhcCceEEEEeeeeeecCccC-CCCccccccCCC
Q 011907 74 TFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSIPY-GGNKEIAYKNAS 152 (475)
Q Consensus 74 TF~QRY~vn~~~~~~~~~~gPIfly~GgEg~~~~~~~~~g~~~~lA~~~gA~vv~lEHRyYG~S~P~-~~~~~~~~~st~ 152 (475)
-|.-.+|+.... ...|+|+.|.|.-..+ ||..+.|++.--.++.= -|+|=-|.-- ..+ -.+.+...
T Consensus 15 i~~~~~~v~~~~-----~~~~li~~IpGNPG~~------gFY~~F~~~L~~~l~~r-~~~wtIsh~~H~~~-P~sl~~~~ 81 (301)
T KOG3975|consen 15 ILTLKPWVTKSG-----EDKPLIVWIPGNPGLL------GFYTEFARHLHLNLIDR-LPVWTISHAGHALM-PASLREDH 81 (301)
T ss_pred ceeeeeeeccCC-----CCceEEEEecCCCCch------hHHHHHHHHHHHhcccc-cceeEEeccccccC-Cccccccc
Confidence 567778876544 3689888887764443 33443333322222110 1233333210 000 00111222
Q ss_pred CCCCCChhhHHHHHHHHHHHHhhhCCCCCCCEEEEccChhhHHHHHHHHh
Q 011907 153 TTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLK 202 (475)
Q Consensus 153 nL~yLts~QALaD~a~Fi~~~k~~~~~~~~pwI~fGGSY~G~LAAW~R~k 202 (475)
+.+ -.-.=.|+|=..=.-.+-+++.+.+.+++++|+|-| |||-++
T Consensus 82 s~~-~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiG----aYm~Lq 126 (301)
T KOG3975|consen 82 SHT-NEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIG----AYMVLQ 126 (301)
T ss_pred ccc-cccccchhhHHHHHHHHHHHhCCCCCEEEEEecchh----HHHHHH
Confidence 222 111223444222111222356667889999999966 676644
No 194
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=21.50 E-value=67 Score=26.38 Aligned_cols=28 Identities=25% Similarity=0.429 Sum_probs=18.2
Q ss_pred HHHHHHHHH-HhhhCCCCCCCE-EEEccChhhH
Q 011907 164 ADYASLIID-LKKNLTATDSPV-VVFGGSYGGM 194 (475)
Q Consensus 164 aD~a~Fi~~-~k~~~~~~~~pw-I~fGGSY~G~ 194 (475)
.|+|.+|+. +.+++. ..| +++|+|||..
T Consensus 36 ~eiA~~iK~~lD~~yG---~~Wh~IVG~~Fg~~ 65 (89)
T PF01221_consen 36 KEIAEFIKQELDKKYG---PTWHCIVGKSFGSS 65 (89)
T ss_dssp HHHHHHHHHHHHHHHS---S-EEEEEESEEEEE
T ss_pred HHHHHHHHHHHhcccC---CceEEEECCcEEEE
Confidence 667777653 555554 467 7789999853
No 195
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=20.48 E-value=66 Score=32.90 Aligned_cols=17 Identities=24% Similarity=0.261 Sum_probs=14.6
Q ss_pred CEEEEccChhhHHHHHH
Q 011907 183 PVVVFGGSYGGMLAAWF 199 (475)
Q Consensus 183 pwI~fGGSY~G~LAAW~ 199 (475)
++|++||+++|+.+|--
T Consensus 1 ~vvIiGgG~aG~~~a~~ 17 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRR 17 (364)
T ss_pred CEEEECCcHHHHHHHHH
Confidence 48999999999888754
Done!