AmiGO: BLAST Results


BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	1.2e-143
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	7.0e-143
BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	3.9e-99
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	2.8e-66
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	1.1e-64
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	2.9e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	3.7e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	3.7e-64
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	3.7e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	4.7e-64
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	4.7e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	6.0e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	7.6e-64
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	1.2e-63
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	2.0e-63
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	3.3e-63
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	4.2e-63
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	5.4e-62
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	5.4e-62
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-61
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-61
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	5.1e-58
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	5.1e-58
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	2.0e-56
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	3.3e-56
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	1.9e-53
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	1.9e-53
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	1.0e-52
BLAST match view associations BLAST with STRS1 STRS1 STRS1 STRESS RESPONSE SUPPRESSOR 1	protein from Arabidopsis thaliana	1.3e-52
BLAST match view associations BLAST with RVBD_3211 RVBD_3211 RVBD_3211 ATP-dependent RNA helicase rhlE	protein from Mycobacterium tuberculosis H37Rv	2.1e-52
BLAST match view associations BLAST with BAS2301 BAS2301 BAS2301 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	2.1e-52
BLAST match view associations BLAST with BA_2475 BA_2475 BA_2475 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	2.1e-52
BLAST match view associations BLAST with CPS_1125 CPS_1125 CPS_1125 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.1e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	2.7e-52
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	2.7e-52
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	2.7e-52
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	5.6e-52
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	1.2e-51
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	1.5e-51
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	1.9e-51
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.9e-51
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	3.1e-51
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	5.1e-51
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	5.1e-51
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	6.5e-51
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	1.1e-50
BLAST match view associations BLAST with rhlE_2 rhlE_2 rhlE_2 Putative ATP-dependent RNA helicase	protein from Pseudomonas protegens Pf-5	1.1e-50
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.3e-50
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	1.3e-50
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	1.7e-50
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	2.8e-50
BLAST match view associations BLAST with CPS_3401 CPS_3401 CPS_3401 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	7.4e-50
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.0e-49
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	1.1e-48
BLAST match view associations BLAST with DET_0183 DET_0183 DET_0183 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Dehalococcoides ethenogenes 195	1.4e-48
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	2.3e-48
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	2.3e-48
BLAST match view associations BLAST with SO_3783 SO_3783 SO_3783 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.3e-48
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with CPS_1418 CPS_1418 CPS_1418 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.9e-48
BLAST match view associations BLAST with DBP3 DBP3 DBP3	gene_product from Candida albicans	7.7e-48
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	7.7e-48
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	7.7e-48
BLAST match view associations BLAST with SPO_3833 SPO_3833 SPO_3833 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Ruegeria pomeroyi DSS-3	9.8e-48
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	9.8e-48
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	9.8e-48
BLAST match view associations BLAST with GSU_0522 GSU_0522 GSU_0522 ATP-dependent RNA helicase RhlB	protein from Geobacter sulfurreducens PCA	1.2e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 DDX17 protein	protein from Bos taurus	1.6e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	1.6e-47
BLAST match view associations BLAST with Ddx17 Ddx17 Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein from Mus musculus	1.6e-47
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	1.6e-47
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	2.0e-47
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.0e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Gallus gallus	2.3e-47
BLAST match view associations BLAST with CG10077 CG10077 CG10077	protein from Drosophila melanogaster	2.5e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.6e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.7e-47
BLAST match view associations BLAST with CG10777 CG10777 CG10777	protein from Drosophila melanogaster	2.9e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	3.0e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Sus scrofa	3.0e-47
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	3.9e-47
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	4.2e-47
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	4.2e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Probable ATP-dependent RNA helicase DDX46	protein from Homo sapiens	4.9e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Bos taurus	4.9e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Canis lupus familiaris	4.9e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Sus scrofa	4.9e-47
BLAST match view associations BLAST with Ddx46 Ddx46 Ddx46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	protein from Mus musculus	4.9e-47
BLAST match view associations BLAST with Ddx46 Ddx46 Ddx46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	gene from Rattus norvegicus	4.9e-47
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Bos taurus	5.4e-47
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011908
        (475 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ...  1404  1.2e-143  1
TAIR|locus:2087832 - symbol:PMH1 "putative mitochondrial ...  1330  7.0e-143  2
TAIR|locus:504955106 - symbol:emb1138 "embryo defective 1...   984  3.9e-99   1
UNIPROTKB|E1BW15 - symbol:DDX50 "Uncharacterized protein"...   674  2.8e-66   1
ZFIN|ZDB-GENE-031113-10 - symbol:ddx21 "DEAD (Asp-Glu-Ala...   659  1.1e-64   1
MGI|MGI:1860494 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) bo...   655  2.9e-64   1
UNIPROTKB|E2QTT0 - symbol:DDX50 "Uncharacterized protein"...   654  3.7e-64   1
UNIPROTKB|E2RPT4 - symbol:DDX50 "Uncharacterized protein"...   654  3.7e-64   1
RGD|1307306 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box he...   654  3.7e-64   1
UNIPROTKB|F1MMK3 - symbol:DDX50 "Uncharacterized protein"...   653  4.7e-64   1
MGI|MGI:2182303 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) bo...   653  4.7e-64   1
UNIPROTKB|F1SUG8 - symbol:DDX50 "Uncharacterized protein"...   652  6.0e-64   1
UNIPROTKB|Q9BQ39 - symbol:DDX50 "ATP-dependent RNA helica...   651  7.6e-64   1
UNIPROTKB|Q9NR30 - symbol:DDX21 "Nucleolar RNA helicase 2...   649  1.2e-63   1
UNIPROTKB|F1LX16 - symbol:F1LX16 "Uncharacterized protein...   647  2.0e-63   1
TAIR|locus:2167903 - symbol:PRH75 species:3702 "Arabidops...   647  2.0e-63   1
UNIPROTKB|A4FV23 - symbol:DDX21 "DDX21 protein" species:9...   645  3.3e-63   1
UNIPROTKB|F1SUG7 - symbol:DDX21 "Uncharacterized protein"...   644  4.2e-63   1
GENEDB_PFALCIPARUM|PFE0215w - symbol:PFE0215w "ATP-depend...   514  5.4e-62   2
UNIPROTKB|Q8I457 - symbol:PFE0215w "ATP-dependent helicas...   514  5.4e-62   2
UNIPROTKB|E2QTL6 - symbol:DDX21 "Uncharacterized protein"...   630  1.3e-61   1
UNIPROTKB|F6V8G4 - symbol:DDX21 "Uncharacterized protein"...   630  1.3e-61   1
UNIPROTKB|Q9KLE2 - symbol:VC_A0804 "ATP-dependent RNA hel...   596  5.1e-58   1
TIGR_CMR|VC_A0804 - symbol:VC_A0804 "ATP-dependent RNA he...   596  5.1e-58   1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli...   581  2.0e-56   1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN...   579  3.3e-56   1
UNIPROTKB|Q4K8U0 - symbol:deaD "Cold-shock DEAD box prote...   553  1.9e-53   1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he...   553  1.9e-53   1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas...   546  1.0e-52   1
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE...   545  1.3e-52   1
UNIPROTKB|O05855 - symbol:rhlE "PROBABLE ATP-DEPENDENT RN...   543  2.1e-52   1
UNIPROTKB|Q81QF0 - symbol:BAS2301 "ATP-dependent RNA heli...   543  2.1e-52   1
TIGR_CMR|BA_2475 - symbol:BA_2475 "ATP-dependent RNA heli...   543  2.1e-52   1
TIGR_CMR|CPS_1125 - symbol:CPS_1125 "ATP-dependent RNA he...   543  2.1e-52   1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN...   542  2.7e-52   1
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas...   542  2.7e-52   1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN...   542  2.7e-52   1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN...   542  2.7e-52   1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN...   542  2.7e-52   1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN...   542  2.7e-52   1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN...   542  2.7e-52   1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli...   542  2.7e-52   1
UNIPROTKB|Q11039 - symbol:deaD "Cold-shock DEAD box prote...   539  5.6e-52   1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he...   536  1.2e-51   1
TIGR_CMR|CPS_1726 - symbol:CPS_1726 "RNA helicase DeaD" s...   535  1.5e-51   1
UNIPROTKB|Q8ECL2 - symbol:SO_3125 "ATP-dependent RNA heli...   534  1.9e-51   1
TIGR_CMR|SO_3125 - symbol:SO_3125 "ATP-dependent RNA heli...   534  1.9e-51   1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he...   532  3.1e-51   1
UNIPROTKB|P0A9P6 - symbol:deaD "DeaD, DEAD-box RNA helica...   530  5.1e-51   1
UNIPROTKB|Q48PB7 - symbol:PSPPH_0449 "ATP-dependent RNA h...   530  5.1e-51   1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1...   529  6.5e-51   1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN...   527  1.1e-50   1
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ...   527  1.1e-50   1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi...   526  1.3e-50   1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   526  1.3e-50   1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN...   525  1.7e-50   1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie...   523  2.8e-50   1
ASPGD|ASPL0000069536 - symbol:AN7424 species:162425 "Emer...   522  3.6e-50   1
TIGR_CMR|CPS_3401 - symbol:CPS_3401 "ATP-dependent RNA he...   519  7.4e-50   1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he...   377  2.0e-49   2
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi...   518  1.1e-48   1
TIGR_CMR|DET_0183 - symbol:DET_0183 "ATP-dependent RNA he...   507  1.4e-48   1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel...   505  2.3e-48   1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he...   505  2.3e-48   1
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli...   505  2.3e-48   1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"...   504  2.9e-48   1
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he...   504  2.9e-48   1
POMBASE|SPBC17D1.06 - symbol:dbp3 "ATP-dependent RNA heli...   502  4.7e-48   1
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica...   500  7.7e-48   1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p...   500  7.7e-48   1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein...   500  7.7e-48   1
TIGR_CMR|SPO_3833 - symbol:SPO_3833 "ATP-dependent RNA he...   499  9.8e-48   1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...   499  9.8e-48   1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe...   499  9.8e-48   1
TIGR_CMR|GSU_0522 - symbol:GSU_0522 "ATP-dependent RNA he...   498  1.2e-47   1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"...   497  1.6e-47   1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"...   497  1.6e-47   1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo...   497  1.6e-47   1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph...   498  1.6e-47   1
UNIPROTKB|Q8EBV7 - symbol:SO_3388 "ATP-dependent RNA heli...   496  2.0e-47   1
TIGR_CMR|SO_3388 - symbol:SO_3388 "ATP-dependent RNA heli...   496  2.0e-47   1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"...   505  2.3e-47   1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ...   501  2.5e-47   1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R...   497  2.6e-47   1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R...   497  2.7e-47   1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ...   503  2.9e-47   1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"...   497  3.0e-47   1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"...   497  3.0e-47   1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer...   494  3.3e-47   1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795...   404  3.9e-47   2
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas...   493  4.2e-47   1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he...   493  4.2e-47   1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R...   502  4.9e-47   1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"...   502  4.9e-47   1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"...   502  4.9e-47   1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"...   502  4.9e-47   1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo...   502  4.9e-47   1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol...   502  4.9e-47   1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R...   502  4.9e-47   1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ...   492  5.4e-47   1

WARNING:  Descriptions of 759 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2087852 [details] [associations]
            symbol:PMH2 "putative mitochondrial RNA helicase 2"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
            evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
            GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
            UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
            PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
            KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
            HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
            ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
            Uniprot:Q9LUW5
        Length = 616

 Score = 1404 (499.3 bits), Expect = 1.2e-143, P = 1.2e-143
 Identities = 291/416 (69%), Positives = 333/416 (80%)

Query:     2 MSSIILKRSSSFLTSKRALTAALTSVETILHSHLAAAK---SGPVIPRHDDIIKSRFSAG 58
             M + +L+RS     SKR L+A+LTS+ T+L  +LA A    S   +    D+ K+ F  G
Sbjct:     1 MITTVLRRSL-LDASKRNLSASLTSINTVLFHNLAPAATRVSDLALIGSSDV-KAGFPFG 58

Query:    59 T--REFHAISRPLDFKSSIAWQHAQSAVDDY----VAYDDSSKDEGLDISKLDISQDIVA 112
                +  H  S PLDF++S+  Q A  A+ +     V   +S   +GL IS+L IS +IV 
Sbjct:    59 VEAKGIHFQSGPLDFRASMVSQ-AGFAISESSERRVGDSESVGGDGLAISELGISPEIVK 117

Query:   113 ALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGR 172
             AL+ +GI KLFPIQKAVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKIIK+N KHGRGR
Sbjct:   118 ALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGR 177

Query:   173 NPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRV 232
             NPLCLVLAPTRELA+QVEKEF ESAPSLDTIC+YGGTPI  QMR LDYGVD  VGTPGRV
Sbjct:   178 NPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRV 237

Query:   233 IDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRS 292
             IDL+KR ALNLSEVQFVVLDEADQML VGFAEDVE+ILE+LP+ RQSMMFSATMP WIRS
Sbjct:   238 IDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRS 297

Query:   293 LTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQ 352
             LT KYL NPLTVDLVGDSDQKLADGI+ YSI    Y + SIIG L+TEHAKGGKCIVFTQ
Sbjct:   298 LTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQ 357

Query:   353 TKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             TKRDADRL++A+A+S+ CE LHGDISQSQRERTL+ FRDG FNIL+ATDVAARGLD
Sbjct:   358 TKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLD 413


>TAIR|locus:2087832 [details] [associations]
            symbol:PMH1 "putative mitochondrial RNA helicase 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
            GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
            EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
            UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
            STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
            GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
            InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
            Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
        Length = 610

 Score = 1330 (473.2 bits), Expect = 7.0e-143, Sum P(2) = 7.0e-143
 Identities = 266/368 (72%), Positives = 298/368 (80%)

Query:    53 SRFSAGTREFHAISRPLDFKSSI-------AWQHAQS-----AVDDYVAYDDSSKDEGLD 100
             S F    R+FH  S P +F+SSI       A ++A S      + D  +   S   +GL 
Sbjct:    58 SPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLA 117

Query:   101 ISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK 160
             I+ L IS +IV AL  RGI KLFPIQKAVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DK
Sbjct:   118 IADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDK 177

Query:   161 IIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMRALDY 220
             IIKFN KHGRG+NP CLVLAPTRELA+QVEKEF ESAPSLDTIC+YGGTPI  QMR L+Y
Sbjct:   178 IIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNY 237

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G+D  VGTPGR+IDL+KR ALNLSEVQFVVLDEADQML VGFAEDVE+IL++LP  RQSM
Sbjct:   238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSATMP WIRSLT KYL NPLT+DLVGDSDQKLADGI++YSIA   Y + SIIG L+ E
Sbjct:   298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIAT 400
             H KGGKCIVFTQTKRDADRLA  +AKSY CE LHGDISQ+QRERTL+ FRDG F+IL+AT
Sbjct:   358 HGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVAT 417

Query:   401 DVAARGLD 408
             DVAARGLD
Sbjct:   418 DVAARGLD 425

 Score = 88 (36.0 bits), Expect = 7.0e-143, Sum P(2) = 7.0e-143
 Identities = 33/99 (33%), Positives = 50/99 (50%)

Query:     2 MSSIILKRSSSFLTSKRALTAALTSVETILHSHLA-AAKSGPVIPRHDDIIKSR------ 54
             M S +L+RS    TS+R L A++TS+   L  +LA AA +   +      +KS       
Sbjct:     1 MISTVLRRSI-LGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSP 59

Query:    55 FSAGTREFHAISRPLDFKSSIAWQHAQSAVDDYV-AYDD 92
             F    R+FH  S P +F+SSI    A  A  +Y  +Y++
Sbjct:    60 FGVKVRDFHVKSVPSEFRSSIV-SSAGFAAQEYAPSYEN 97


>TAIR|locus:504955106 [details] [associations]
            symbol:emb1138 "embryo defective 1138" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
            GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
            EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
            EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
            EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
            IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
            RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
            SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
            EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
            GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
            PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
            Uniprot:Q8L7S8
        Length = 748

 Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
 Identities = 207/355 (58%), Positives = 258/355 (72%)

Query:    64 AISRPLDFKSSIAWQH-AQSAVDDYVAYDDSSK---DEG--LDISKLDISQDIVAALARR 117
             A++ P    S  A++    S  D+Y    D++    D+G  L ISKL + Q +  +L +R
Sbjct:    61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120

Query:   118 GISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK----FNEKHGRGRN 173
             GI+ LFPIQ+AVL PA+QGRD+I RA+TGTGKTLAFGIPI+ ++ +    +      GR 
Sbjct:   121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL 180

Query:   174 PLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVI 233
             P  LVLAPTRELAKQVEKE  ESAP L T+CVYGG   + Q  AL  GVD VVGTPGR+I
Sbjct:   181 PKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRII 240

Query:   234 DLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSL 293
             DLI+  +L L EV+++VLDEADQML+VGF E VE ILE LP  RQSM+FSATMP W++ L
Sbjct:   241 DLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKL 300

Query:   294 TNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQT 353
               KYL NPL +DLVGD D+KLA+GI LY+IAT+   K +I+  LIT +AKGGK IVFTQT
Sbjct:   301 ARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQT 360

Query:   354 KRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             KRDAD ++ A++ S   E LHGDISQ QRERTL+AFR G+F +L+ATDVA+RGLD
Sbjct:   361 KRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLD 415


>UNIPROTKB|E1BW15 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0043330 GeneTree:ENSGT00680000100003 OMA:EILCVAY
            EMBL:AADN02028009 IPI:IPI00582179 Ensembl:ENSGALT00000006591
            Uniprot:E1BW15
        Length = 693

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 141/319 (44%), Positives = 202/319 (63%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS+  +  L  RG++ LFP+Q     P   G+D+I +ARTGTGKT +F IP
Sbjct:   112 EGA-FSNFPISKGTIQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQARTGTGKTFSFAIP 170

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++K+   +++  RGR+P  LVLAPTRELA QV K+F +    L   C YGGTP + Q+ 
Sbjct:   171 LIEKLQADSQERRRGRSPKVLVLAPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQID 230

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL-----E 271
              +  G+D +VGTPGR+ D ++   L+L++V+ VVLDE DQML +GFAE VE IL     +
Sbjct:   231 LIRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKK 290

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDL+G   QK A  +   +I     ++
Sbjct:   291 DSEDNPQTLLFSATCPNWVYDVAKKYMKSKYEQVDLIGRKTQKAATTVEHLAIECHWSQR 350

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
              ++IG +I  ++   G+ IVF +TK+DA+ LA   +   +C+ LHGDI Q QRE TL  F
Sbjct:   351 AAVIGDVIQVYSGSYGRTIVFCETKKDANELALNASIKQDCQSLHGDIPQKQREITLKGF 410

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   411 RNGAFKVLVATNVAARGLD 429


>ZFIN|ZDB-GENE-031113-10 [details] [associations]
            symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
            ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
            OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
            RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
            STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
            Uniprot:B1H1J4
        Length = 759

 Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
 Identities = 140/319 (43%), Positives = 200/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS + +  L  RG+S LF IQ         G+D+IG+ARTGTGKT +F +P
Sbjct:   165 EGA-FSNFRISPNTIKLLQARGVSYLFDIQVKTFNAVYDGKDLIGQARTGTGKTFSFAVP 223

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++K+   +++  RGR P  LVLAPTRELA QV K+F +    L   C YGG+  + Q+ 
Sbjct:   224 LVEKLQSGDQERRRGRPPKVLVLAPTRELAIQVTKDFKDITRKLSVTCFYGGSSYNPQID 283

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER---- 272
             A+  G+D +VGTPGR+ D ++ N L+LS++Q VVLDE DQML +GFAE VE IL      
Sbjct:   284 AIRSGIDVLVGTPGRIRDHLQNNKLDLSQLQHVVLDEVDQMLDMGFAEQVEEILSASYKK 343

Query:   273 -LPQNRQSMMFSATMPPWIRSLTNKYLKNP-LTVDLVGDSDQKLADGISLYSIATSMYEK 330
                Q  Q+++FSAT P W+  +  KY+++  + VDL+G   QK A  +   +IA    ++
Sbjct:   344 DAEQKPQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQKAATTVEHLAIACHWSQR 403

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
              S+IG +I  ++   G+ IVF +TK++A  L+   +   + + LHGDI Q QRE TL  F
Sbjct:   404 ASVIGDVIQVYSGSHGRTIVFCETKKEATELSLNTSIKQSAQSLHGDIPQKQREVTLKGF 463

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   464 RNGSFEVLVATNVAARGLD 482


>MGI|MGI:1860494 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=ISS] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=ISS] [GO:0009615 "response to virus" evidence=IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043330
            "response to exogenous dsRNA" evidence=IMP] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1860494 GO:GO:0005524 GO:GO:0005730 EMBL:CH466553
            GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:AF220365
            EMBL:AF159131 EMBL:AK160095 EMBL:BC043655 IPI:IPI00120691
            RefSeq:NP_062426.2 UniGene:Mm.413275 ProteinModelPortal:Q9JIK5
            SMR:Q9JIK5 DIP:DIP-48574N IntAct:Q9JIK5 STRING:Q9JIK5
            PhosphoSite:Q9JIK5 PaxDb:Q9JIK5 PRIDE:Q9JIK5
            Ensembl:ENSMUST00000045866 GeneID:56200 KEGG:mmu:56200
            InParanoid:Q3TVJ3 NextBio:312026 Bgee:Q9JIK5 CleanEx:MM_DDX21
            Genevestigator:Q9JIK5 GermOnline:ENSMUSG00000020075 Uniprot:Q9JIK5
        Length = 851

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 142/351 (40%), Positives = 210/351 (59%)

Query:    65 ISRPLDFKSSIAWQHAQSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKLFP 124
             +S+P + KS+ +    + +  +        + EG   S   IS++ V  L  RG++ LFP
Sbjct:   225 LSQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGA-FSNFPISEETVKLLKARGVNFLFP 283

Query:   125 IQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRE 184
             IQ         G+D+I +ARTGTGKT +F IP+++K+    ++  RGR P  LVLAPTRE
Sbjct:   284 IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRE 343

Query:   185 LAKQVEKEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLS 244
             LA QV K+F +    L   C YGGTP   Q+  +  G+D +VGTPGR+ D ++   L+L+
Sbjct:   344 LANQVSKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLDLT 403

Query:   245 EVQFVVLDEADQMLSVGFAEDVEVIL-----ERLPQNRQSMMFSATMPPWIRSLTNKYLK 299
             +++ VVLDE DQML +GFA+ VE IL     +    N Q+++FSAT P W+ ++  KY+K
Sbjct:   404 KLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMK 463

Query:   300 NPLT-VDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA-KGGKCIVFTQTKRDA 357
             +    VDL+G   QK A  +   +I     E+ ++IG +I  ++   G+ I+F +TK+DA
Sbjct:   464 STYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDA 523

Query:   358 DRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               L+       + + LHGDI Q QRE TL  FR+G F +L+AT+VAARGLD
Sbjct:   524 QELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLD 574


>UNIPROTKB|E2QTT0 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
        Length = 738

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 137/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG+S LFPIQ     P  +G+D+I +ARTGTGKT +F IP
Sbjct:   137 EGA-FSNFPISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIP 195

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++++ +  E   + R+P  LVLAPTRELA QV K+F +    L   C YGGT    Q+ 
Sbjct:   196 LIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQIN 255

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL--- 273
              +  G+D +VGTPGR+ D ++   L+LS+++ VVLDE DQML +GFAE VE I+      
Sbjct:   256 HIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT 315

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDLVG   QK A  +   +I     ++
Sbjct:   316 DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQR 375

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
             P++IG ++  ++   G+ I+F +TK++   +A       N + LHGDI+QSQRE TL  F
Sbjct:   376 PAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGF 435

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   436 REGSFKVLVATNVAARGLD 454


>UNIPROTKB|E2RPT4 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            EMBL:AAEX03002786 Ensembl:ENSCAFT00000038045 Uniprot:E2RPT4
        Length = 687

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 137/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG+S LFPIQ     P  +G+D+I +ARTGTGKT +F IP
Sbjct:   138 EGA-FSNFPISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIP 196

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++++ +  E   + R+P  LVLAPTRELA QV K+F +    L   C YGGT    Q+ 
Sbjct:   197 LIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQIN 256

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL--- 273
              +  G+D +VGTPGR+ D ++   L+LS+++ VVLDE DQML +GFAE VE I+      
Sbjct:   257 HIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT 316

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDLVG   QK A  +   +I     ++
Sbjct:   317 DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQR 376

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
             P++IG ++  ++   G+ I+F +TK++   +A       N + LHGDI+QSQRE TL  F
Sbjct:   377 PAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGF 436

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   437 REGSFKVLVATNVAARGLD 455


>RGD|1307306 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
            to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
            RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
            STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
            Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
            UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
            Uniprot:Q3B8Q1
        Length = 782

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 143/353 (40%), Positives = 208/353 (58%)

Query:    63 HAISRPLDFKSSIAWQHAQSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKL 122
             + +S P    SS      +S  +  +  +     EG   S   IS++ V  L  RG++ L
Sbjct:   150 NGLSHPKPDSSSTQAPGEESETEKEIPVEQK---EGA-FSNFPISEETVKLLKARGVNFL 205

Query:   123 FPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPT 182
             FPIQ         G+D+I +ARTGTGKT +F IP+++K+    ++  RGR P  LVLAPT
Sbjct:   206 FPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPT 265

Query:   183 RELAKQVEKEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALN 242
             RELA QV K+F +    L   C YGGTP   Q+  +  G+D +VGTPGR+ D ++   L+
Sbjct:   266 RELANQVSKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLD 325

Query:   243 LSEVQFVVLDEADQMLSVGFAEDVEVIL-----ERLPQNRQSMMFSATMPPWIRSLTNKY 297
             L++++ VVLDE DQML +GFA+ VE IL     +    N Q+++FSAT P W+ ++  KY
Sbjct:   326 LTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKY 385

Query:   298 LKNPLT-VDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA-KGGKCIVFTQTKR 355
             +K+    VDL+G   QK A  +   +I     E+ ++IG +I  ++   G+ I+F +TK+
Sbjct:   386 MKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKK 445

Query:   356 DADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             DA  L+       + + LHGDI Q QRE TL  FR+G F +L+AT+VAARGLD
Sbjct:   446 DAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLD 498


>UNIPROTKB|F1MMK3 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
            UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
            GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
            Uniprot:F1MMK3
        Length = 737

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 137/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ     P  +G+D+I +ARTGTGKT +F IP
Sbjct:   136 EGA-FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIP 194

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++++ +  E   + R+P  LVLAPTRELA QV K+F +    L   C YGGT    Q+ 
Sbjct:   195 LIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDVTRKLSVACFYGGTSYQSQIN 254

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL--- 273
              +  G+D +VGTPGR+ D ++   L+LS+++ VVLDE DQML +GFAE VE IL      
Sbjct:   255 HIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDILHESYKT 314

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDLVG   QK A  +   +I     ++
Sbjct:   315 DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQR 374

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
             P++IG ++  ++   G+ I+F +TK++   +A       N + LHGDI+QSQRE TL  F
Sbjct:   375 PAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGF 434

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   435 REGSFKVLVATNVAARGLD 453


>MGI|MGI:2182303 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
            UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
            PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
            Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
            UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
            CleanEx:MM_DDX50 Genevestigator:Q99MJ9
            GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
        Length = 734

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 136/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ     P  +G+D+I +ARTGTGKT +F IP
Sbjct:   133 EGA-FSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIP 191

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++++ +  E   + R+P  LVLAPTRELA QV K+F +    L   C YGGT    Q+ 
Sbjct:   192 LIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQIN 251

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL--- 273
              +  G+D +VGTPGR+ D ++   L+LS+++ VVLDE DQML +GFAE VE I+      
Sbjct:   252 QIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT 311

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDLVG   QK A  +   +I     ++
Sbjct:   312 DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQR 371

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
             P++IG ++  ++   G+ I+F +TK++   +A       N + LHGDI+QSQRE TL  F
Sbjct:   372 PAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGF 431

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   432 REGSFKVLVATNVAARGLD 450


>UNIPROTKB|F1SUG8 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
            EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
        Length = 737

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 136/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ     P  +G+D+I +ARTGTGKT +F IP
Sbjct:   136 EGA-FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIP 194

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++++ +  E   + R+P  LVLAPTRELA QV K+F +    L   C YGGT    Q+ 
Sbjct:   195 LIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITKKLSVACFYGGTSYQSQIN 254

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL--- 273
              +  G+D +VGTPGR+ D ++   L+LS+++ VVLDE DQML +GFAE VE I+      
Sbjct:   255 HIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT 314

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDLVG   QK A  +   +I     ++
Sbjct:   315 DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQR 374

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
             P++IG ++  ++   G+ I+F +TK++   +A       N + LHGDI+QSQRE TL  F
Sbjct:   375 PAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGF 434

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   435 REGSFKVLVATNVAARGLD 453


>UNIPROTKB|Q9BQ39 [details] [associations]
            symbol:DDX50 "ATP-dependent RNA helicase DDX50"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
            EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
            UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
            SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
            DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
            PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
            KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
            HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
            PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
            PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
            GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
            CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
        Length = 737

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 136/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ     P  +G+D+I +ARTGTGKT +F IP
Sbjct:   136 EGA-FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIP 194

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++++ +  E   + R+P  LVLAPTRELA QV K+F +    L   C YGGT    Q+ 
Sbjct:   195 LIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQIN 254

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL--- 273
              +  G+D +VGTPGR+ D ++   L+LS+++ VVLDE DQML +GFAE VE I+      
Sbjct:   255 HIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT 314

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+  +  KY+K+    VDLVG   QK A  +   +I     ++
Sbjct:   315 DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQR 374

Query:   331 PSIIGQLITEHAKG-GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
             P++IG ++  ++   G+ I+F +TK++   +A       N + LHGDI+QSQRE TL  F
Sbjct:   375 PAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGF 434

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   435 REGSFKVLVATNVAARGLD 453


>UNIPROTKB|Q9NR30 [details] [associations]
            symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
            sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
            "double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
            to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
            EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
            EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
            EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
            EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
            IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
            UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
            IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
            DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
            PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
            KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
            H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
            neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
            PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
            ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
            Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
        Length = 783

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 140/343 (40%), Positives = 205/343 (59%)

Query:    73 SSIAWQHAQSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEP 132
             S  A + + S ++  +  +     EG   S   IS++ +  L  RG++ LFPIQ      
Sbjct:   164 SEAASEESNSEIEQEIPVEQK---EGA-FSNFPISEETIKLLKGRGVTFLFPIQAKTFHH 219

Query:   133 AMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKE 192
                G+D+I +ARTGTGKT +F IP+++K+    +   RGR P  LVLAPTRELA QV K+
Sbjct:   220 VYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKD 279

Query:   193 FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLD 252
             F +    L   C YGGTP   Q   +  G+D +VGTPGR+ D I+   L+L++++ VVLD
Sbjct:   280 FSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLD 339

Query:   253 EADQMLSVGFAEDVEVIL-----ERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDL 306
             E DQML +GFA+ VE IL     +    N Q+++FSAT P W+ ++  KY+K+    VDL
Sbjct:   340 EVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDL 399

Query:   307 VGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA-KGGKCIVFTQTKRDADRLAHAMA 365
             +G   QK A  +   +I     ++ ++IG +I  ++   G+ I+F +TK++A  L+   A
Sbjct:   400 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSA 459

Query:   366 KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
                + + LHGDI Q QRE TL  FR+G F +L+AT+VAARGLD
Sbjct:   460 IKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLD 502


>UNIPROTKB|F1LX16 [details] [associations]
            symbol:F1LX16 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
            Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
        Length = 659

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 142/353 (40%), Positives = 207/353 (58%)

Query:    63 HAISRPLDFKSSIAWQHAQSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKL 122
             + +S P    SS      +S  +  +  +     EG   S   IS++ V  L  RG++ L
Sbjct:    34 NGLSHPKPDSSSTQAPGEESETEKEIPVEQK---EGA-FSNFPISEETVKLLKARGVNFL 89

Query:   123 FPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPT 182
             FPIQ         G+D+I +ARTGTGKT +F IP+++K+    ++  RGR P  LVLAPT
Sbjct:    90 FPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPT 149

Query:   183 RELAKQVEKEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALN 242
             RELA QV K+F +    L   C YGGTP   Q+  +  G+D +VGTPGR+ D ++   L+
Sbjct:   150 RELANQVSKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLD 209

Query:   243 LSEVQFVVLDEADQMLSVGFAEDVEVIL-----ERLPQNRQSMMFSATMPPWIRSLTNKY 297
             L++++ VVLDE DQML +GFA+ VE IL     +    N Q+++FSAT P W+ ++  KY
Sbjct:   210 LTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKY 269

Query:   298 LKNPLT-VDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA-KGGKCIVFTQTKR 355
             +K+    VDL+G   QK A  +   +I     E+ ++IG +I  ++   G+ I+F +TK+
Sbjct:   270 MKSTYKQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKK 329

Query:   356 DADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             DA  L+       + + LHGDI Q QRE TL  FR+  F +L+AT+VAARGLD
Sbjct:   330 DAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNDNFGVLVATNVAARGLD 382


>TAIR|locus:2167903 [details] [associations]
            symbol:PRH75 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IEA;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0001510 "RNA methylation" evidence=RCA] [GO:0051604 "protein
            maturation" evidence=RCA] [GO:0016070 "RNA metabolic process"
            evidence=TAS] [GO:0017151 "DEAD/H-box RNA helicase binding"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
            GO:GO:0003723 GO:GO:0016070 GO:GO:0017151 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB019235 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 EMBL:X99938 EMBL:AY039576 EMBL:AY056137
            EMBL:BT008581 IPI:IPI00520493 RefSeq:NP_201025.1 UniGene:At.22598
            ProteinModelPortal:Q39189 SMR:Q39189 IntAct:Q39189 STRING:Q39189
            PaxDb:Q39189 PRIDE:Q39189 EnsemblPlants:AT5G62190.1 GeneID:836340
            KEGG:ath:AT5G62190 GeneFarm:918 TAIR:At5g62190 InParanoid:Q39189
            OMA:QCEPPRE PhylomeDB:Q39189 ProtClustDB:CLSN2687322
            Genevestigator:Q39189 GermOnline:AT5G62190 Uniprot:Q39189
        Length = 671

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 146/348 (41%), Positives = 213/348 (61%)

Query:    70 DFKSSIAWQHAQSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKLFPIQKAV 129
             + KS  + +  +S+    +  +D   D    +SK  IS  +   L   GI  LFPIQ + 
Sbjct:    67 EVKSDSSSEKKKSSKKVKLGVEDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQAST 126

Query:   130 LEPAMQGRDMIGRARTGTGKTLAFGIPILDKII----KFNEKHGRGRNPLCLVLAPTREL 185
              +  + G D++GRARTG GKTLAF +PIL+ ++    K   K G GR+P  LVL PTREL
Sbjct:   127 FDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTREL 186

Query:   186 AKQVEKEFHESAPSL--DTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNL 243
             AKQV  +F     SL   + C+YGG     Q   L  GVD VVGTPGR+ D I+R  L+ 
Sbjct:   187 AKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDF 246

Query:   244 SEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR--QSMMFSATMPPWIRSLTNKYLK-N 300
             S +QF VLDEAD+ML +GF EDVE+IL ++  +   Q+++FSAT+P W+++++N++LK +
Sbjct:   247 SYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRD 306

Query:   301 PLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRL 360
               T+DLVG+   K ++ +   +I  +      +I  +I+ ++ GG+ I+F +TK     L
Sbjct:   307 QKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSEL 366

Query:   361 AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +  +  S     LHG+I QSQRE TL+ FR+G+F  L+AT+VAARGLD
Sbjct:   367 SGLLDGS---RALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLD 411


>UNIPROTKB|A4FV23 [details] [associations]
            symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
            EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
            UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
            KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
        Length = 784

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 135/319 (42%), Positives = 199/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ         G+D+I +ARTGTGKT +F IP
Sbjct:   186 EGA-FSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIP 244

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++K++   +   RGR P  LVLAPTRELA QV ++F +    L   C YGGTP   Q+ 
Sbjct:   245 LVEKLLGELQDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPYGGQIE 304

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL-----E 271
              +  G+D +VGTPGR+ D ++   L+L++++ VVLDE DQML +GFA+ VE IL     +
Sbjct:   305 RMKNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKK 364

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+ ++  KY+K+    VDL+G   QK A  +   +I     ++
Sbjct:   365 DSEDNPQTLLFSATCPYWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQR 424

Query:   331 PSIIGQLITEHAK-GGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
              ++IG +I  ++   G+ I+F +TK++A  L+  +A   + + LHGDI Q QRE TL  F
Sbjct:   425 AAVIGDVIRVYSGFQGRTIIFCETKKEAQELSQNVAVRQDAQSLHGDIPQKQREITLKGF 484

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   485 RNGDFGVLVATNVAARGLD 503


>UNIPROTKB|F1SUG7 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
            [GO:0009615 "response to virus" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
            OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
            Uniprot:F1SUG7
        Length = 855

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 136/319 (42%), Positives = 198/319 (62%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ         G+D+I +ARTGTGKT +F IP
Sbjct:   257 EGA-FSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIP 315

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             +++K+    +   RGR P  LVLAPTRELA QV ++F +    L   C YGGTP   Q+ 
Sbjct:   316 LIEKLQGELQDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPYGGQID 375

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL-----E 271
              +  G+D +VGTPGR+ D ++ N L+L++++ VVLDE DQML +GFA+ VE IL     +
Sbjct:   376 RMRNGIDILVGTPGRIKDHLQNNKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKK 435

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+ ++  KY+K+    VDL+G   QK A  +   +I     ++
Sbjct:   436 DSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQR 495

Query:   331 PSIIGQLITEHAK-GGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
              ++IG +I  ++   G+ I+F +TK++A  L+   A   + + LHGDI Q QRE TL  F
Sbjct:   496 AAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNAAVRQDAQSLHGDIPQKQREITLKGF 555

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   556 RNGDFGVLVATNVAARGLD 574


>GENEDB_PFALCIPARUM|PFE0215w [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0020011
            "apicoplast" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 514 (186.0 bits), Expect = 5.4e-62, Sum P(2) = 5.4e-62
 Identities = 110/250 (44%), Positives = 162/250 (64%)

Query:   165 NEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGV 222
             N +H +  +P  LVL PTREL+KQVE  F E +   + + + +YGG   ++Q   L  G+
Sbjct:   251 NREHNK--DPSILVLEPTRELSKQVENTFKEISQFYNFNIMSIYGGESYTYQENKLRKGI 308

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP-QNRQSMM 281
             D + GTPGR+ID I++  L+L  +++VVLDEAD+ML++GF  D+E IL  +  +  Q ++
Sbjct:   309 DILTGTPGRIIDHIEKKNLSLQNIKYVVLDEADEMLNLGFTHDIERILSNINLKEAQVLL 368

Query:   282 FSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT--SMYEKPSIIGQLIT 339
             +SAT P WI+ +++KYLKNP  +D+V DS  K A  I   +I T   + EK  ++  +I 
Sbjct:   369 YSATTPSWIKDISSKYLKNPFCIDVV-DSSNKTAKNIKHIAIKTPYDIKEKALLLEDIIL 427

Query:   340 EHAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
               + GG+ I+FT+TK +AD L +    KS +   LHG+I+QS RE T+  FR G F ILI
Sbjct:   428 VKSNGGQVIIFTRTKLEADILCSEGSFKSLSFAVLHGNIAQSTREYTMQRFRQGMFQILI 487

Query:   399 ATDVAARGLD 408
             ATD+A+RGLD
Sbjct:   488 ATDIASRGLD 497

 Score = 142 (55.0 bits), Expect = 5.4e-62, Sum P(2) = 5.4e-62
 Identities = 34/88 (38%), Positives = 57/88 (64%)

Query:    85 DDYVAY-DDSSKDEGLDISKLDISQDIVAALA-RRGISKLFPIQKAVLEPAMQGRDMIGR 142
             DD  ++ +D  K +  D+S  +I+++IV  L  ++GI  +  IQ    +P  +G+D+IGR
Sbjct:   129 DDSESHLNDQGKCKFSDLS--EINKNIVEFLENKKGIKYMTKIQSQSFKPIYEGKDIIGR 186

Query:   143 ARTGTGKTLAFGIPILDKIIKF---NEK 167
             + TG+GKTLAF +P+++K+ K    NEK
Sbjct:   187 SETGSGKTLAFALPLVEKLYKMKTSNEK 214

 Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query:   445 LDADLLSSQGS 455
             L+AD+L S+GS
Sbjct:   443 LEADILCSEGS 453


>UNIPROTKB|Q8I457 [details] [associations]
            symbol:PFE0215w "ATP-dependent helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
            ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
            GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
            HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
        Length = 755

 Score = 514 (186.0 bits), Expect = 5.4e-62, Sum P(2) = 5.4e-62
 Identities = 110/250 (44%), Positives = 162/250 (64%)

Query:   165 NEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGV 222
             N +H +  +P  LVL PTREL+KQVE  F E +   + + + +YGG   ++Q   L  G+
Sbjct:   251 NREHNK--DPSILVLEPTRELSKQVENTFKEISQFYNFNIMSIYGGESYTYQENKLRKGI 308

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP-QNRQSMM 281
             D + GTPGR+ID I++  L+L  +++VVLDEAD+ML++GF  D+E IL  +  +  Q ++
Sbjct:   309 DILTGTPGRIIDHIEKKNLSLQNIKYVVLDEADEMLNLGFTHDIERILSNINLKEAQVLL 368

Query:   282 FSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT--SMYEKPSIIGQLIT 339
             +SAT P WI+ +++KYLKNP  +D+V DS  K A  I   +I T   + EK  ++  +I 
Sbjct:   369 YSATTPSWIKDISSKYLKNPFCIDVV-DSSNKTAKNIKHIAIKTPYDIKEKALLLEDIIL 427

Query:   340 EHAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
               + GG+ I+FT+TK +AD L +    KS +   LHG+I+QS RE T+  FR G F ILI
Sbjct:   428 VKSNGGQVIIFTRTKLEADILCSEGSFKSLSFAVLHGNIAQSTREYTMQRFRQGMFQILI 487

Query:   399 ATDVAARGLD 408
             ATD+A+RGLD
Sbjct:   488 ATDIASRGLD 497

 Score = 142 (55.0 bits), Expect = 5.4e-62, Sum P(2) = 5.4e-62
 Identities = 34/88 (38%), Positives = 57/88 (64%)

Query:    85 DDYVAY-DDSSKDEGLDISKLDISQDIVAALA-RRGISKLFPIQKAVLEPAMQGRDMIGR 142
             DD  ++ +D  K +  D+S  +I+++IV  L  ++GI  +  IQ    +P  +G+D+IGR
Sbjct:   129 DDSESHLNDQGKCKFSDLS--EINKNIVEFLENKKGIKYMTKIQSQSFKPIYEGKDIIGR 186

Query:   143 ARTGTGKTLAFGIPILDKIIKF---NEK 167
             + TG+GKTLAF +P+++K+ K    NEK
Sbjct:   187 SETGSGKTLAFALPLVEKLYKMKTSNEK 214

 Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query:   445 LDADLLSSQGS 455
             L+AD+L S+GS
Sbjct:   443 LEADILCSEGS 453


>UNIPROTKB|E2QTL6 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
            evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
            RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
            GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
            CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
            Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
            NextBio:20852481 Uniprot:E2QTL6
        Length = 785

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 134/319 (42%), Positives = 197/319 (61%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ         G+D+I +ARTGTGKT +F IP
Sbjct:   187 EGA-FSNFPISEETIKLLKARGVTFLFPIQAKTFYHVYSGKDLIAQARTGTGKTFSFAIP 245

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             ++ K+    +   RGR P  LVLAPTRELA QV ++F +    L   C YGGTP   Q+ 
Sbjct:   246 LIVKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPYGGQIE 305

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL-----E 271
              +  G+D +VGTPGR+ D ++   L+L++++ VVLDE DQML +GFA+ VE IL     +
Sbjct:   306 RMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKK 365

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+ ++  KY+K+    VDL+G   QK A  +   +I     ++
Sbjct:   366 DSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQR 425

Query:   331 PSIIGQLITEHAK-GGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
              ++IG +I  ++   G+ I+F +TK++A  L+  ++   + + LHGDI Q QRE TL  F
Sbjct:   426 AAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGF 485

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   486 RNGDFGVLVATNVAARGLD 504


>UNIPROTKB|F6V8G4 [details] [associations]
            symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
        Length = 786

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 134/319 (42%), Positives = 197/319 (61%)

Query:    97 EGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP 156
             EG   S   IS++ +  L  RG++ LFPIQ         G+D+I +ARTGTGKT +F IP
Sbjct:   187 EGA-FSNFPISEETIKLLKARGVTFLFPIQAKTFYHVYSGKDLIAQARTGTGKTFSFAIP 245

Query:   157 ILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVYGGTPISHQMR 216
             ++ K+    +   RGR P  LVLAPTRELA QV ++F +    L   C YGGTP   Q+ 
Sbjct:   246 LIVKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPYGGQIE 305

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL-----E 271
              +  G+D +VGTPGR+ D ++   L+L++++ VVLDE DQML +GFA+ VE IL     +
Sbjct:   306 RMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKK 365

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLT-VDLVGDSDQKLADGISLYSIATSMYEK 330
                 N Q+++FSAT P W+ ++  KY+K+    VDL+G   QK A  +   +I     ++
Sbjct:   366 DSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQR 425

Query:   331 PSIIGQLITEHAK-GGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAF 389
              ++IG +I  ++   G+ I+F +TK++A  L+  ++   + + LHGDI Q QRE TL  F
Sbjct:   426 AAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGF 485

Query:   390 RDGRFNILIATDVAARGLD 408
             R+G F +L+AT+VAARGLD
Sbjct:   486 RNGDFGVLVATNVAARGLD 504


>UNIPROTKB|Q9KLE2 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 134/318 (42%), Positives = 194/318 (61%)

Query:    95 KDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFG 154
             +D  +  S L ++  I++AL   G     PIQ A +   ++GRD +G+A+TGTGKT AF 
Sbjct:    22 QDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFS 81

Query:   155 IPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFH---ESAPSLDTICVYGGTPI 211
             +P+L+K+     K      P  +V+APTRELA QV  E     ++   L  + +YGG  I
Sbjct:    82 LPLLNKLNLSQYK------PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135

Query:   212 SHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE 271
               QMRAL  G   VVGTPGRV DLI R+ L+L E    +LDEAD+ML +GF +DV  I+E
Sbjct:   136 LDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIME 195

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKP 331
             + P++ Q ++FSATMPP ++ +  ++L+NP  VD+ G S+Q +A     Y +   + EK 
Sbjct:   196 QAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAG-SNQTVAKVEQQYWVVKGV-EKD 253

Query:   332 SIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFR 390
               + +L+ E  +    IVF +T++D +RLA  + A+ +    LHGDI QS RERT+   +
Sbjct:   254 EAMARLL-ETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIK 312

Query:   391 DGRFNILIATDVAARGLD 408
              G  +IL+ATDV ARGLD
Sbjct:   313 QGVIDILVATDVVARGLD 330


>TIGR_CMR|VC_A0804 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 134/318 (42%), Positives = 194/318 (61%)

Query:    95 KDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFG 154
             +D  +  S L ++  I++AL   G     PIQ A +   ++GRD +G+A+TGTGKT AF 
Sbjct:    22 QDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFS 81

Query:   155 IPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFH---ESAPSLDTICVYGGTPI 211
             +P+L+K+     K      P  +V+APTRELA QV  E     ++   L  + +YGG  I
Sbjct:    82 LPLLNKLNLSQYK------PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135

Query:   212 SHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE 271
               QMRAL  G   VVGTPGRV DLI R+ L+L E    +LDEAD+ML +GF +DV  I+E
Sbjct:   136 LDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIME 195

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKP 331
             + P++ Q ++FSATMPP ++ +  ++L+NP  VD+ G S+Q +A     Y +   + EK 
Sbjct:   196 QAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAG-SNQTVAKVEQQYWVVKGV-EKD 253

Query:   332 SIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFR 390
               + +L+ E  +    IVF +T++D +RLA  + A+ +    LHGDI QS RERT+   +
Sbjct:   254 EAMARLL-ETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIK 312

Query:   391 DGRFNILIATDVAARGLD 408
              G  +IL+ATDV ARGLD
Sbjct:   313 QGVIDILVATDVVARGLD 330


>TIGR_CMR|SO_4034 [details] [associations]
            symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
            acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
            ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
            PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
        Length = 623

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 131/320 (40%), Positives = 190/320 (59%)

Query:    94 SKDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAF 153
             S DE     +L +S++++ AL   G  K  PIQ A ++P M G+D++G+A+TGTGKT AF
Sbjct:     2 SSDERT-FRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAF 60

Query:   154 GIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP---SLDTICVYGGTP 210
              +P+L+K+            P  LVLAPTRELA QV + F   A    +   + +YGG  
Sbjct:    61 ALPLLNKVTSQT-------TPQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQS 113

Query:   211 ISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL 270
             +  Q+ AL  G   +VGTPGRV+D ++R  L L  +Q +VLDEAD+ML +GF +D+E IL
Sbjct:   114 MQQQLNALKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWIL 173

Query:   271 ERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEK 330
             E  P  RQ  +FSATMP  I+ + NK+LKN   + +   +     D I    +  S + K
Sbjct:   174 EHTPPQRQLALFSATMPEQIKRVANKHLKNATNISIA--ASHTTVDSIEQRFVQVSQHNK 231

Query:   331 -PSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSA 388
               +++  L  E+ +G   I+F +T+     LA  + A+ Y   PLHGD++Q  RER +  
Sbjct:   232 LEALVRVLEVENTEG--IIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQ 289

Query:   389 FRDGRFNILIATDVAARGLD 408
              ++G+ +ILIATDVAARGLD
Sbjct:   290 LKNGKLDILIATDVAARGLD 309


>UNIPROTKB|Q5L3G9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
            ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
            KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
            BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
        Length = 467

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 130/309 (42%), Positives = 190/309 (61%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +SQ+++ A+ R G  +  PIQ   +  ++Q +D+IG+A+TGTGKT AFGIPI++K+ 
Sbjct:     6 ELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKV- 64

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDY 220
               N K+   +    LV+APTRELA QV +E ++  +   +  + +YGG  I  Q+RAL  
Sbjct:    65 --NVKNSAVQ---ALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR+ID I R  L L  V  VVLDEAD+ML++GF ED+E IL  +P  RQ++
Sbjct:   120 HPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  V +   + +     I  Y +     +K  I+ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMNEPELVKV--KAKEMTVPNIQQYYLEVHEKKKFDILTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              A     IVF +TKR  D LA A+  + Y  E +HGD+SQ++R   L  F++G   IL+A
Sbjct:   238 QAPE-LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q4K8U0 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
            GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
            GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
            ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
            Uniprot:Q4K8U0
        Length = 557

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 127/309 (41%), Positives = 187/309 (60%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L++  +IVAA+   G  +   IQ+  +   + G DMIG+A+TGTGKT AF +PIL +I  
Sbjct:    11 LELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRIDP 70

Query:   164 FNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESA---PSLDTICVYGGTPISHQMRALDY 220
                     R P  L+LAPTRELA QV   F   A   P +  + VYGG P+  Q++A+  
Sbjct:    71 SK------REPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRN 124

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   VV TPGR+ D ++R+   L+ V  +VLDEAD+ML +GF +D+EVI + +P+ RQ++
Sbjct:   125 GAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTV 184

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSAT+P  IR++  ++LK+P  V +   S  +    I    +     +K S +  L+ E
Sbjct:   185 LFSATLPQSIRAIAERHLKDPKHVKI--QSKTQTVTAIEQAHLLVHADQKTSAVLSLL-E 241

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
                    I+F +TK+    LA A+ AK Y    L+GDI+Q+QRER + + +DGR +I++A
Sbjct:   242 VEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVA 301

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   302 TDVAARGLD 310


>TIGR_CMR|SPO_1443 [details] [associations]
            symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
            ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
            PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
        Length = 471

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 123/318 (38%), Positives = 186/318 (58%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S+L+++  ++ A+   G     PIQ   + PA++GRD++G A+TGTGKT +F +P++  +
Sbjct:     5 SELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITLL 64

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEF--HESAPSLDTICVYGGTPISHQMRALD 219
              +      R R P  LVL PTRELA QV + F  +     L    + GG     Q   +D
Sbjct:    65 AR---GRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALID 121

Query:   220 YGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
              GVD ++ TPGR++D  +R  L L+ VQ +V+DEAD+ML +GF  D+E I    P  RQ+
Sbjct:   122 RGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQT 181

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDLV--GDSDQKLADGISLYSIAT---SMYEKPSII 334
             + FSATM P I  +TN +L  P  +++     + + +  G+ L+  +       EK +++
Sbjct:   182 LFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVL 241

Query:   335 GQLITEHAKGGKC---IVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFR 390
               LI   A+G KC   I+F   K D D +A ++ K  Y+  P+HGD+ QSQR RTL  FR
Sbjct:   242 RALID--AEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFR 299

Query:   391 DGRFNILIATDVAARGLD 408
             +G+  +L+A+DVAARGLD
Sbjct:   300 EGKLRLLVASDVAARGLD 317


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 119/316 (37%), Positives = 189/316 (59%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +    L +S DI+ A+A +G  +  PIQ+  +   ++GRD++  A+TGTGKT  F +P+L
Sbjct:     1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query:   159 DKIIKFNEKHGRGRNPL-CLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQM 215
               +I   + H +GR P+  L+L PTRELA Q+ +   + +  L+  ++ V+GG  I+ QM
Sbjct:    61 QHLIT-RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
               L  GVD +V TPGR++DL  +NA+ L +V+ +VLDEAD+ML +GF  D+  +L +LP 
Sbjct:   120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
              RQ+++FSAT    I++L  K L NPL +++   +    +D ++ +        K  ++ 
Sbjct:   180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTA--SDQVTQHVHFVDKKRKRELLS 237

Query:   336 QLITEHAKGG--KCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDG 392
              +I    KG   + +VFT+TK  A+ LA  + K       +HG+ SQ  R R L+ F+ G
Sbjct:   238 HMI---GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294

Query:   393 RFNILIATDVAARGLD 408
                +L+ATD+AARGLD
Sbjct:   295 DIRVLVATDIAARGLD 310


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 127/294 (43%), Positives = 179/294 (60%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGR---NPLCLVLA 180
             PIQ       + GRD+IG A+TG+GKTLAFGIP +  ++K N+K G G    NP CLVL+
Sbjct:   139 PIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLS 198

Query:   181 PTRELAKQVEKEFHESA-P-SLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKR 238
             PTRELA Q+     E+  P  L +ICVYGG+    Q+ A+  GVD V+GTPGR+ DLI+ 
Sbjct:   199 PTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIES 258

Query:   239 NALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYL 298
             N L LS+V FVVLDEAD+ML +GF E V  IL    + RQ +MFSAT P  +  L  +++
Sbjct:   259 NVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFM 318

Query:   299 K-NPLTVDLVGDSDQKLA-DGISLYSIATSMYEKPSIIGQLITEH-AKGGKCIVFTQTKR 355
               NP+ V ++G  D     D + +  +         +I  L   H ++  + +VF   K 
Sbjct:   319 DPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKV 377

Query:   356 DADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +A+RL   +  + +    +HG+ +QS+R R+LS F++G   +L+ATDVAARGLD
Sbjct:   378 EAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLD 431


>UNIPROTKB|O05855 [details] [associations]
            symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
            species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
            wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
            EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
            RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
            EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
            GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
            KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
            TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
            Uniprot:O05855
        Length = 527

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 121/324 (37%), Positives = 181/324 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             +KL +  +IV AL   GI + F IQ+  L  A+ G D+IG+ARTG GKT AFG+P+L +I
Sbjct:    13 AKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGKTFAFGVPLLQRI 72

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKE------FHESAPSLD----------TICV 205
                +        P  LV+ PTREL  QV  +      +  + P  D           + +
Sbjct:    73 TSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSI 132

Query:   206 YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAED 265
             YGG P   Q+ AL  G D VVGTPGR++DL ++  L L  +  +VLDEAD+ML +GF  D
Sbjct:   133 YGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPD 192

Query:   266 VEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT 325
             +E IL ++P +RQSM+FSATMP  I +L   ++  P  +         + D    +    
Sbjct:   193 IERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFVYRA 252

Query:   326 SMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRER 384
                +K  ++ +++    +G   ++FT+TKR A ++A  +  + +    +HGD+ Q  RE+
Sbjct:   253 HALDKVELVSRVLQARDRGAT-MIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREK 311

Query:   385 TLSAFRDGRFNILIATDVAARGLD 408
              L AFR G  ++L+ATDVAARG+D
Sbjct:   312 ALKAFRTGGIDVLVATDVAARGID 335


>UNIPROTKB|Q81QF0 [details] [associations]
            symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 120/310 (38%), Positives = 183/310 (59%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L IS+     L   GI++  PIQ+  +   + G+D+IG+A+TGTGKTLAF +PIL+KI 
Sbjct:     9 ELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKI- 67

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE---SAPSLDTICVYGGTPISHQMRALD 219
                       +   L++APTRELA Q+  E  +       ++ + +YGG  ++ Q+R L 
Sbjct:    68 -----DPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLK 122

Query:   220 YGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
                  VV TPGR++D I+R  ++LS +  +VLDEADQML  GF  D+E IL+  P ++Q+
Sbjct:   123 GNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQT 182

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLIT 339
             M+FSAT+P  I+ L  +Y+  P  + +   S++   D I    I T+   KP  + + + 
Sbjct:   183 MLFSATIPKDIKKLAKRYMDEPQMIQV--QSEEVTVDTIEQRVIETTDRAKPDAL-RFVM 239

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +  +    ++F +TK  A +L   +    YNC  LHGDI Q++RER + +FR+ +   LI
Sbjct:   240 DRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLI 299

Query:   399 ATDVAARGLD 408
             ATDVAARGLD
Sbjct:   300 ATDVAARGLD 309


>TIGR_CMR|BA_2475 [details] [associations]
            symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
            RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
            DNASU:1085525 EnsemblBacteria:EBBACT00000011128
            EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
            GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
            KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
            ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
            BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
        Length = 450

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 120/310 (38%), Positives = 183/310 (59%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L IS+     L   GI++  PIQ+  +   + G+D+IG+A+TGTGKTLAF +PIL+KI 
Sbjct:     9 ELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKI- 67

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE---SAPSLDTICVYGGTPISHQMRALD 219
                       +   L++APTRELA Q+  E  +       ++ + +YGG  ++ Q+R L 
Sbjct:    68 -----DPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLK 122

Query:   220 YGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
                  VV TPGR++D I+R  ++LS +  +VLDEADQML  GF  D+E IL+  P ++Q+
Sbjct:   123 GNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQT 182

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLIT 339
             M+FSAT+P  I+ L  +Y+  P  + +   S++   D I    I T+   KP  + + + 
Sbjct:   183 MLFSATIPKDIKKLAKRYMDEPQMIQV--QSEEVTVDTIEQRVIETTDRAKPDAL-RFVM 239

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +  +    ++F +TK  A +L   +    YNC  LHGDI Q++RER + +FR+ +   LI
Sbjct:   240 DRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLI 299

Query:   399 ATDVAARGLD 408
             ATDVAARGLD
Sbjct:   300 ATDVAARGLD 309


>TIGR_CMR|CPS_1125 [details] [associations]
            symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
            ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
            KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
            BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
        Length = 466

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 113/316 (35%), Positives = 187/316 (59%)

Query:    96 DEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGI 155
             D     + L +S+ ++ A+  +G     PIQ   +   + GRD++  A+TGTGKT  F +
Sbjct:     3 DTPTKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTL 62

Query:   156 PILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISH 213
             P+L ++           N   L+L PTRELA Q+ +  E +    +L ++ V+GG  I+ 
Sbjct:    63 PLLQRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINP 122

Query:   214 QMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL 273
             Q+  L  GVD +V TPGR++DL  + A+  S+++  +LDEAD+ML +GF  D++ ++  L
Sbjct:   123 QIARLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTAL 182

Query:   274 PQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSI 333
             P++RQ+++FSAT  P IR+L    + NPL + +  D++   A+ ++ +  A     KP++
Sbjct:   183 PKDRQNLLFSATFSPEIRALAKGMVNNPLEISV--DAENSTAEKVTQWLTAVDKKRKPAV 240

Query:   334 IGQLITEHAKGGKCIVFTQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDG 392
             +  LI E+    + +VFT+TK  A++L  H  A+      +HG+ SQ  R + L+AF+DG
Sbjct:   241 LTHLIKEN-NWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDG 299

Query:   393 RFNILIATDVAARGLD 408
                IL+ATD+AARG+D
Sbjct:   300 SVKILVATDIAARGID 315


>UNIPROTKB|A0R8U6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
            "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
            ProteinModelPortal:A0R8U6 STRING:A0R8U6
            EnsemblBacteria:EBBACT00000069056 GeneID:4546566
            GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
        Length = 528

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 125/311 (40%), Positives = 186/311 (59%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             D   L ++  I+ +L + G +   PIQ+  +   +QGRD++G A+TGTGKTLAF  PILD
Sbjct:     8 DFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILD 67

Query:   160 KIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEF--HESAPSLDTICVYGGTPISHQMRA 217
             ++ + N      R    LVLAPTRELA Q+   F  + +  +L  + V GG  I  Q+R 
Sbjct:    68 RLSR-NASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQ 126

Query:   218 LDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR 277
             L+ G   +V TPGR+IDL+++ A++L +V+ ++LDEADQML +GF   +  I + +P  R
Sbjct:   127 LERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKR 186

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             Q++ FSATMP  + SL   +L+NP  V +   +    A  I          EK S++ + 
Sbjct:   187 QTLFFSATMPKAVESLAATFLRNPAEVSVAPPATT--AGRIEQRVCFVEQPEKASLLIEK 244

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             I +  +    IVFT+TK  AD +   +AK+  +   +HG+ SQSQRE+ L AF+ GR  I
Sbjct:   245 IRD-PELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPI 303

Query:   397 LIATDVAARGL 407
             L+ATD+AARG+
Sbjct:   304 LVATDIAARGI 314


>UNIPROTKB|Q63GX5 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
            "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
            ProteinModelPortal:Q63GX5 STRING:Q63GX5
            EnsemblBacteria:EBBACT00000041470 GeneID:3022962
            GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
            BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
        Length = 528

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q6HPE6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:281309 "Bacillus thuringiensis serovar konkukian str.
            97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
            ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
            GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
            PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
        Length = 528

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q73EU1 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
            RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
            DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
            GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
            Uniprot:Q73EU1
        Length = 525

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q81IT9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
            STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
            GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
            PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
        Length = 533

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q81VG0 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>TIGR_CMR|BA_0247 [details] [associations]
            symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 119/309 (38%), Positives = 188/309 (60%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S  ++ ++   G  +  PIQ   +  A+QG+D+IG+A+TGTGKT AFG+P+LDK+ 
Sbjct:     6 ELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVD 65

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
                E   +G     +V+APTRELA QV +E ++      +  + +YGG  I+ Q+RAL  
Sbjct:    66 THKESV-QG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
                 +VGTPGR++D I R  L L  V+ VVLDEAD+ML++GF ED+E IL  +P+  Q++
Sbjct:   120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +  +++  P  + +   + +     I  + +     +K  ++ +L+  
Sbjct:   180 LFSATMPDPIRRIAERFMTEPQHIKV--KAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDI 237

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              +     IVF +TKR  D L+ A+  + Y  E +HGD++Q++R   L  F++G   +L+A
Sbjct:   238 QSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVA 296

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   297 TDVAARGLD 305


>UNIPROTKB|Q11039 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A homolog"
            species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
            GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
            RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
            PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
            EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
            GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
            PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
            ProtClustDB:CLSK791051 Uniprot:Q11039
        Length = 563

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 131/309 (42%), Positives = 183/309 (59%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L I   ++ A+   G      IQ A +   M G D++G A+TGTGKT AF IP+L KI  
Sbjct:    18 LQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKI-D 76

Query:   164 FNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP---SLDTICVYGGTPISHQMRALDY 220
                K      P  LVL PTRELA QV + F         L+ + +YGG+  + Q+  L  
Sbjct:    77 ITSKV-----PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRR 131

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   VVGTPGR+ID ++R  L+LS V F+VLDEAD+ML++GFA+DVE IL   P+ +Q  
Sbjct:   132 GAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVA 191

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMPP IR L+ KYL +P  V     +   +A+ IS   I  +   K   + +++ E
Sbjct:   192 LFSATMPPAIRKLSAKYLHDPFEVTCKAKT--AVAENISQSYIQVA--RKMDALTRVL-E 246

Query:   341 HAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
                    IVF +TK+  + +A  + A+ ++   + GD+ Q+QRERT++A RDG  +IL+A
Sbjct:   247 VEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVA 306

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   307 TDVAARGLD 315


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 118/313 (37%), Positives = 191/313 (61%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  ++L ++  I+ A+A  G ++  P+Q A +  A++  D++  A+TGTGKT AF +P L
Sbjct:     1 MTFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPAL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEF--HESAPSLDTICVYGGTPISHQMR 216
              ++   +   G GR P  LVL PTRELA+QV      + +   + +  + GG P   Q+R
Sbjct:    61 QRLS--SPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLR 118

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L   VD +V TPGR++DL+ R +L+LS ++ +VLDEAD+ML +GF++DV+ I    P  
Sbjct:   119 LLSAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPAT 178

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ+++F+ATM   +  L  + L+ P  +D+ G           L+ +A  ++ K  ++  
Sbjct:   179 RQTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLH-VADDLHHKNRLLRH 237

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LIT+ +   + I+F+ TKRDA+ LA  + A+ ++   LHGD+ Q+ R RT++A + GR  
Sbjct:   238 LITDESLR-RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIR 296

Query:   396 ILIATDVAARGLD 408
             +L+ATDVAARGLD
Sbjct:   297 LLVATDVAARGLD 309


>TIGR_CMR|CPS_1726 [details] [associations]
            symbol:CPS_1726 "RNA helicase DeaD" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
            STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
            OMA:WIVKGVE ProtClustDB:CLSK741103
            BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
        Length = 611

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 119/319 (37%), Positives = 191/319 (59%)

Query:    94 SKDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAF 153
             ++ E +  + L + +++++A+   G +    IQ   + P + G+D++G A+TGTGKT AF
Sbjct:    10 TEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAF 69

Query:   154 GIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEK---EFHESAPSLDTICVYGGTP 210
             G+P L KI    +K      P  +VLAPTRELA QV +    F +    L    +YGG  
Sbjct:    70 GLPALAKIDTSIKK------PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQS 123

Query:   211 ISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVIL 270
                Q + L+ G   VVGTPGR++D ++R +L L E++  VLDEAD+ML++GF ED++ IL
Sbjct:   124 YGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWIL 183

Query:   271 ERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEK 330
             + +P+  Q  +FSATMPP IR + N++LK+P  + +   + +K    I+ Y+   S   K
Sbjct:   184 DHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVA--AVKKAKANITQYAWKVSGITK 241

Query:   331 PSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAF 389
              + + + I E  +    I+F +T+ D   +A  + ++ Y    L+GD++Q+QRER +   
Sbjct:   242 MTAL-ERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQM 300

Query:   390 RDGRFNILIATDVAARGLD 408
             + G+ +IL+ATDV ARGLD
Sbjct:   301 KSGKSSILVATDVVARGLD 319


>UNIPROTKB|Q8ECL2 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 115/308 (37%), Positives = 177/308 (57%)

Query:   110 IVAALARR----GISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             I+A L  R    G     P+Q A +   + GRD++  A TG+GKT AF +P+L ++ +  
Sbjct:    16 IIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAK 75

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP----SLDTICVYGGTPISHQMRALDYG 221
                       CLVL PTRELA+QV   F   A      L  +  +GG  ++ QM++L  G
Sbjct:    76 SADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAG 135

Query:   222 VDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMM 281
              D +V TPGR++DL+  NAL L++V   VLDEAD+MLS+GF E++E +L  LP+ +Q+++
Sbjct:   136 ADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLL 195

Query:   282 FSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEH 341
             FSAT P  +R+LT K L  PL   L  + +  +   +    I  +  +K +++  LI +H
Sbjct:   196 FSATFPEEVRALTTKLLHQPLEYHLQSEQESTIEQRV----ITVNREQKTALLAHLIKQH 251

Query:   342 AKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIAT 400
              +  + ++F   K   + LA  ++K   + E  HGD +Q  R R L  F++G  ++LIAT
Sbjct:   252 -QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIAT 310

Query:   401 DVAARGLD 408
             D+AARG+D
Sbjct:   311 DIAARGID 318


>TIGR_CMR|SO_3125 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 115/308 (37%), Positives = 177/308 (57%)

Query:   110 IVAALARR----GISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             I+A L  R    G     P+Q A +   + GRD++  A TG+GKT AF +P+L ++ +  
Sbjct:    16 IIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAK 75

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP----SLDTICVYGGTPISHQMRALDYG 221
                       CLVL PTRELA+QV   F   A      L  +  +GG  ++ QM++L  G
Sbjct:    76 SADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAG 135

Query:   222 VDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMM 281
              D +V TPGR++DL+  NAL L++V   VLDEAD+MLS+GF E++E +L  LP+ +Q+++
Sbjct:   136 ADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLL 195

Query:   282 FSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEH 341
             FSAT P  +R+LT K L  PL   L  + +  +   +    I  +  +K +++  LI +H
Sbjct:   196 FSATFPEEVRALTTKLLHQPLEYHLQSEQESTIEQRV----ITVNREQKTALLAHLIKQH 251

Query:   342 AKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIAT 400
              +  + ++F   K   + LA  ++K   + E  HGD +Q  R R L  F++G  ++LIAT
Sbjct:   252 -QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIAT 310

Query:   401 DVAARGLD 408
             D+AARG+D
Sbjct:   311 DIAARGID 318


>TIGR_CMR|GSU_0914 [details] [associations]
            symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
            ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
            PATRIC:22024603 ProtClustDB:CLSK924451
            BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
        Length = 447

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 127/366 (34%), Positives = 199/366 (54%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +D         +   +A  G     PIQ   +   M GRD++G A+TGTGKT AF +PIL
Sbjct:     1 MDFKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMR 216
              ++ +  E+ GR R    LV+APTRELA+Q+   F        L ++ VYGG  ++ Q++
Sbjct:    61 HRLQQ-GER-GRVR---ALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQ 115

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  G + VV  PGR++D I +  ++LS ++ +VLDEADQM  +GF  D+  +L+ LP  
Sbjct:   116 KLKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPR 175

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ+++FSATMP  IR+L    L +P+TV  VG     +    +LY +   +  K  ++ +
Sbjct:   176 RQTLLFSATMPIDIRTLAQDILVDPVTVQ-VGTVAPAVTVAHALYPVEQHL--KTPLLLE 232

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 395
             L+  H      ++FT+TK  A RL   + K+ Y    L G++SQ++R+  L  FRDG F 
Sbjct:   233 LL-RHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQ 291

Query:   396 ILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEMLDADLLSSQGS 455
             IL+ATD+AARG+D                  ++  +I R G++    +     + S  G+
Sbjct:   292 ILVATDIAARGIDVSQVSHVINYDIPDTAEAYIH-RIGRTGRAARSGDAFTL-VTSDDGA 349

Query:   456 PLKEVE 461
              ++ +E
Sbjct:   350 MVRAIE 355


>UNIPROTKB|P0A9P6 [details] [associations]
            symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0000027 "ribosomal large
            subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
            process" evidence=IGI] [GO:0003724 "RNA helicase activity"
            evidence=IDA] [GO:0070417 "cellular response to cold"
            evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
            GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
            RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
            DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
            PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
            EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
            KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
            EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
            BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
            Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
        Length = 629

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 124/309 (40%), Positives = 182/309 (58%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L +   I+ AL   G  K  PIQ   +   + GRD++G A+TG+GKT AF +P+L  +  
Sbjct:    11 LGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL-- 68

Query:   164 FNEKHGRGRNPLCLVLAPTRELAKQVEK---EFHESAPSLDTICVYGGTPISHQMRALDY 220
                     + P  LVLAPTRELA QV +   +F +    ++ + +YGG     Q+RAL  
Sbjct:    69 ----DPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQ 124

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   VVGTPGR++D +KR  L+LS++  +VLDEAD+ML +GF EDVE I+ ++P+  Q+ 
Sbjct:   125 GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTA 184

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSATMP  IR +T +++K P  V +      +  D    Y     M +  +++  L  E
Sbjct:   185 LFSATMPEAIRRITRRFMKEPQEVRIQSSVTTR-PDISQSYWTVWGMRKNEALVRFLEAE 243

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
                    I+F +TK     +A A+ ++ YN   L+GD++Q+ RE+TL   +DGR +ILIA
Sbjct:   244 DFDAA--IIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIA 301

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   302 TDVAARGLD 310


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 121/318 (38%), Positives = 192/318 (60%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  + L +S+ +V A+   G ++  P+Q+  +   +QGRD++  A+TGTGKT  F +PIL
Sbjct:     1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query:   159 DKIIKF-----NEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTI--CVYGGTPI 211
             +++        +++HG  R P  LVL PTRELA QV + F   A  L  +  C++GG  +
Sbjct:    61 ERLFPNGVPDKSQRHGP-RQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGM 119

Query:   212 SHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE 271
             + Q++A+  GVD +V  PGR++DL  + +++LS V+ +VLDEAD+ML +GF  DV+ +L 
Sbjct:   120 NPQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKP 331
             RLP  RQ+++FSAT    I SL  K L NP  +++   +         ++ +A +   K 
Sbjct:   180 RLPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAAN--HKR 237

Query:   332 SIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFR 390
             S++  LIT  A   + +VFT+TK  A+RLA  + K       +HG+ SQ+ R + L+ F+
Sbjct:   238 SLLAHLITVGA-WEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFK 296

Query:   391 DGRFNILIATDVAARGLD 408
              G   I++ATD+AARGLD
Sbjct:   297 AGDVRIMVATDIAARGLD 314


>TAIR|locus:2084178 [details] [associations]
            symbol:DRH1 "DEAD box RNA helicase 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
            PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
            SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
            EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
            EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
            PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
            RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
            ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
            PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
            EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
            KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
            OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
            Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
        Length = 619

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 114/304 (37%), Positives = 179/304 (58%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++  +   G S   PIQ      AMQGRD++  A+TG+GKTL + IP    + +     
Sbjct:   168 ELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDS 227

Query:   169 GRGRNPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAV 225
               G  P  LVL+PTRELA Q+++E   F  S+  +   C+YGG P   Q+R L+ G D V
Sbjct:   228 RMG--PTILVLSPTRELATQIQEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLERGADIV 284

Query:   226 VGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSAT 285
             V TPGR+ D+++   ++L ++ ++VLDEAD+ML +GF   +  I++ +P  RQ++M++AT
Sbjct:   285 VATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTAT 344

Query:   286 MPPWIRSLTNKYLKNPLTVDLVGDSDQKLAD-GISLYSIATSMYEKPSIIGQLITEHAKG 344
              P  +R +    L NP  V+ +G+ D+ +A+  I+ +    +  EK   + Q++     G
Sbjct:   345 WPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPG 403

Query:   345 GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAA 404
              K I+F  TKR  D+L   + + +    +HGD SQ +R+  L+ FR GR  +L+ATDVAA
Sbjct:   404 SKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAA 463

Query:   405 RGLD 408
             RGLD
Sbjct:   464 RGLD 467


>UNIPROTKB|P96614 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI] [GO:0010501 "RNA secondary
            structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
            GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
            EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
            ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
            EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
            PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
            GO:GO:0010501 Uniprot:P96614
        Length = 494

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 115/307 (37%), Positives = 182/307 (59%)

Query:   105 DISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKF 164
             ++S D++ A+ R G  +  PIQ   +   +  +D+IG+A+TGTGKT AFGIP+++KI   
Sbjct:     9 NLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKI--- 65

Query:   165 NEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGV 222
                +    N   +V+APTRELA QV +E ++         + +YGG  I  Q+RAL    
Sbjct:    66 ---NPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNP 122

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMF 282
             + +VGTPGR++D I R  + L+ V  VV+DEAD+ML++GF +D+E IL  +P   Q+++F
Sbjct:   123 NIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLF 182

Query:   283 SATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA 342
             SATMP  I+ +  +++  P  V +   + +     I  + +     +K   + +L+   +
Sbjct:   183 SATMPAPIKRIAERFMTEPEHVKV--KAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS 240

Query:   343 KGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATD 401
                  IVF +TKR  D LA A+  + Y  E +HGD++Q++R   L  F++G   +L+ATD
Sbjct:   241 PE-LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATD 299

Query:   402 VAARGLD 408
             VAARGLD
Sbjct:   300 VAARGLD 306


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 120/318 (37%), Positives = 190/318 (59%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  + L +S+ +V A+   G ++  P+Q+  +   +QGRD++  A+TGTGKT  F +PIL
Sbjct:     1 MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query:   159 DKIIKF-----NEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTI--CVYGGTPI 211
             +++        +++HG  R P  LVL PTRELA QV   F   A  L  +  C++GG  +
Sbjct:    61 ERLFPNGHPDKSQRHGP-RQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGM 119

Query:   212 SHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE 271
             + Q++A+  GVD +V  PGR++DL  + +++LS V+ +VLDEAD+ML +GF  DV+ +L 
Sbjct:   120 NPQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179

Query:   272 RLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKP 331
             RLP  RQ+++FSAT    I  L  K L NP  +++   +         ++ +  S   K 
Sbjct:   180 RLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPAS--HKR 237

Query:   332 SIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFR 390
             +++  LIT  A   + +VFT+TK  A+RLA  + K   +   +HG+ SQ+ R + L+ F+
Sbjct:   238 ALLAHLITAGA-WEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFK 296

Query:   391 DGRFNILIATDVAARGLD 408
              G   IL+ATD+AARGLD
Sbjct:   297 AGEVRILVATDIAARGLD 314


>TAIR|locus:2222617 [details] [associations]
            symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
            Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
            ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
            EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
            OMA:YLIPGFM Uniprot:F4K6V1
        Length = 712

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 115/295 (38%), Positives = 178/295 (60%)

Query:   118 GISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCL 177
             G S   PIQ      AMQ RD++  A+TG+GKTL + IP    + + +     G  P  L
Sbjct:   248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG--PTIL 305

Query:   178 VLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVID 234
             VL+PTRELA Q++ E   F +S+  +   C+YGG P   Q++ ++ GVD VV TPGR+ D
Sbjct:   306 VLSPTRELATQIQVEALKFGKSS-KISCACLYGGAPKGPQLKEIERGVDIVVATPGRLND 364

Query:   235 LIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLT 294
             +++   ++L +V ++VLDEAD+ML +GF   +  I+  +P  RQ++M++AT P  +R + 
Sbjct:   365 ILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIA 424

Query:   295 NKYLKNPLTVDLVGDSDQKLADGISLYSIAT-SMYEKPSIIGQLITEHAKGGKCIVFTQT 353
                L NP  V+ +G+ D+ +A+     +I   +  EK S + Q++     G K I+F  T
Sbjct:   425 ADLLVNPAQVN-IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCST 483

Query:   354 KRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             KR  D+LA  + +++    +HGD SQ++R+  L+ FR GR  +L+ATDVAARGLD
Sbjct:   484 KRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLD 538


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 122/341 (35%), Positives = 200/341 (58%)

Query:    81 QSAVDDYVAYDDSSKD---EGLDISK-LDISQD------IVAALARRGISKLFPIQKAVL 130
             Q+  +  VA   + +D   EG D+ K + + QD      I+ A+A+ G ++  PIQ    
Sbjct:   137 QAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGW 196

Query:   131 EPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVE 190
               A++GRD+IG A TG+GKTLA+ +P L  +     + G+   P+ L+LAPTRELA Q++
Sbjct:   197 PMALKGRDLIGIAETGSGKTLAYLLPALVHV-SAQPRLGQDDGPIVLILAPTRELAVQIQ 255

Query:   191 KEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQF 248
             +E  +      + + C+YGG P   Q+R L  GV+ V+ TPGR+ID+++    NL  V +
Sbjct:   256 EESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTY 315

Query:   249 VVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVG 308
             +VLDEAD+ML +GF   +  I+ ++  +RQ++++SAT P  + +L  ++L++P    ++G
Sbjct:   316 LVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKA-IIG 374

Query:   309 DSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS- 367
              +D K    I+         EK + +  L+ +   G K ++F +TKR  D++   +    
Sbjct:   375 STDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDG 434

Query:   368 YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +    +HGD +QS+R+R L+ F+ GR  I+ ATDVAARGLD
Sbjct:   435 WPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475


>UNIPROTKB|Q65N62 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
            EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
            ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
            EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
            GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
            GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
            PATRIC:18946609 ProtClustDB:CLSK886742
            BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
        Length = 487

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 117/306 (38%), Positives = 177/306 (57%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             +S D+  A+ R G  +  PIQ   +   +  +D+IG+A+TGTGKT AFGIP+++KI    
Sbjct:    10 LSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKI---- 65

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVD 223
               +    N   +V+APTRELA QV +E ++         + +YGG  I  Q+RAL     
Sbjct:    66 --NPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPH 123

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
              +VGTPGR++D I R  + L  V  VVLDEAD+ML++GF ED+E IL  +P   Q+++FS
Sbjct:   124 IIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFS 183

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAK 343
             ATMP  I+ +  +++ NP  V +   + +     I  + +     +K   + +L+   + 
Sbjct:   184 ATMPAPIKRIAERFMTNPEHVKV--KAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSP 241

Query:   344 GGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
                 IVF +TKR  D L  A+  + Y  E +HGD++Q++R   L  F+ G   +L+ATDV
Sbjct:   242 E-LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV 300

Query:   403 AARGLD 408
             AARGLD
Sbjct:   301 AARGLD 306


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 119/306 (38%), Positives = 183/306 (59%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK-- 167
             ++  + + G ++  PIQ      AM+GRD+IG A TG+GKTL++ +P    I+  N +  
Sbjct:   110 VLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPA---IVHVNAQPM 166

Query:   168 --HGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVD 223
               HG G  P+ LVLAPTRELA Q+++E  +  S+  + T C+YGG P   Q+R L  GV+
Sbjct:   167 LAHGDG--PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVE 224

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
              V+ TPGR+ID+++ N  NL  V ++VLDEAD+ML +GF   +  I+  +  +RQ++ +S
Sbjct:   225 IVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWS 284

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAK 343
             AT P  +  L+ K+L NP  V ++G SD K    I       S  +K + + +L+ +   
Sbjct:   285 ATWPKEVEQLSKKFLYNPYKV-IIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMD 343

Query:   344 GGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
             G + +VF  TK+  D++   +    +    +HGD SQ++R+  LS FR G+  I+ ATDV
Sbjct:   344 GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403

Query:   403 AARGLD 408
             AARGLD
Sbjct:   404 AARGLD 409


>ASPGD|ASPL0000069536 [details] [associations]
            symbol:AN7424 species:162425 "Emericella nidulans"
            [GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
            from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
            GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
        Length = 488

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 134/376 (35%), Positives = 208/376 (55%)

Query:    52 KSRFSAGTREFHAISRPLDFKSSIAWQHAQSAVDDYVA-----YDDSSKDEG-----LDI 101
             KS+ +  T++   +S P  F+S       Q+ +D +++       D+S D+      +  
Sbjct:    18 KSKGTKDTKKNTEVSPPY-FQSPALDNVPQTEIDKFLSDHSIKITDASADKPSLRPIISF 76

Query:   102 SKLDIS-QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK 160
             S L  S +D+ A L   G +    IQ A       GRD+IG A TG+GKTLAFG+P L K
Sbjct:    77 SFLPPSNKDLYAPLD--GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKK 134

Query:   161 IIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRAL 218
             ++    K    R PL +V++PTRELA Q+  +  + A  +D    C++GG     Q  AL
Sbjct:   135 VLDLKTKQKSCR-PLAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQREAL 193

Query:   219 DYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP-QNR 277
                   VV TPGR+ DL    +L+L  V+++VLDEAD+ML  GF +D++ I+  +P   R
Sbjct:   194 KSAA-VVVATPGRLKDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKR 252

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGD--SDQKLADGISLYSIATSMYEKPSIIG 335
             Q++MF+AT PP +R+L + ++ +P+TV + GD  +D +    I         +EK   + 
Sbjct:   253 QTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLV 312

Query:   336 QLITEHAKG--GKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDG 392
             Q++  H +G   K + F   K++A R+   +  K +    +HGD+SQ +R R+L AF+ G
Sbjct:   313 QILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSG 372

Query:   393 RFNILIATDVAARGLD 408
                +L+ATDVAARGLD
Sbjct:   373 AATVLVATDVAARGLD 388


>TIGR_CMR|CPS_3401 [details] [associations]
            symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
            STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
            OMA:HLIKEHQ ProtClustDB:CLSK907013
            BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
        Length = 432

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 118/315 (37%), Positives = 177/315 (56%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             ++L +   ++A LA     +  PIQ   +     GRD+I  A TG+GKT  F +P+L K+
Sbjct:    11 TELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQKL 70

Query:   162 ---IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP----SLDTICVYGGTPISHQ 214
                I    K+ +G     LVL PTRELAKQV       A      + T+ V+GG  ++ Q
Sbjct:    71 REDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVNIQ 130

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             M AL  GVD +V TPGR++DLI  NA+ L +V+ +VLDEAD+MLS+GF E++  +L   P
Sbjct:   131 MLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLALTP 190

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSII 334
             + +Q+++FSAT P  + +LT + L NP+ + L       L   +  +++     EK +++
Sbjct:   191 KKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTLVQRV--FTVNKG--EKTAVL 246

Query:   335 GQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGR 393
               LI +  +  + ++F   K   + LA  +AK        HGD  QS+R R L  F+ G 
Sbjct:   247 AHLIQQE-QWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGD 305

Query:   394 FNILIATDVAARGLD 408
               +LIATD+AARGLD
Sbjct:   306 IEVLIATDIAARGLD 320


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 377 (137.8 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
 Identities = 89/247 (36%), Positives = 140/247 (56%)

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVE---KEFHESAPSLDTICVYGGTPISHQMRALDYGV 222
             EK   G+    L+L PTRELA QV    K+F +  P    + VYGG  ++ Q + L  G+
Sbjct:    84 EKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGV-VYGGGKMASQTKMLKQGL 142

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMF 282
             D +V TPGR+++ +    ++LS+V+F+VLDEAD+ML +GF  D+E +L  +    Q++MF
Sbjct:   143 DVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTLMF 202

Query:   283 SATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA 342
             SAT    ++SL N+ LK+P T+ +  ++        ++Y +      K  ++ +LI  + 
Sbjct:   203 SATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVYWVTEE--RKRELLSELIGVN- 259

Query:   343 KGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATD 401
                + +VF  TK  A+ LA  +          HGD +Q  R + L  F +G+  +L+ATD
Sbjct:   260 NWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVATD 319

Query:   402 VAARGLD 408
             VAARGLD
Sbjct:   320 VAARGLD 326

 Score = 155 (59.6 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
 Identities = 40/107 (37%), Positives = 55/107 (51%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             + +  + +S D++ A+   G   L PIQ+  +    QG D++  A+TGTGKT AF +PIL
Sbjct:     1 MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60

Query:   159 DKIIKFN----------------EKHGRGRNPLCLVLAPTRELAKQV 189
             D I K N                EK   G+    L+L PTRELA QV
Sbjct:    61 DAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQV 107


>TAIR|locus:2081061 [details] [associations]
            symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
            SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
            UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
            PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
            KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
            HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
            ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
            Uniprot:Q9SQV1
        Length = 1088

 Score = 518 (187.4 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 113/304 (37%), Positives = 176/304 (57%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +I+  L   G     PIQ      A+Q RD++  A+TG+GKTL + IP    I+  + ++
Sbjct:   445 EILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF--ILLRHCRN 502

Query:   169 GRGRNPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAV 225
                  P  L+LAPTRELA Q++ E   F  S+  +   C+YGG P   Q++ L+ G D V
Sbjct:   503 DSRNGPTVLILAPTRELATQIQDEALRFGRSS-RISCTCLYGGAPKGPQLKELERGADIV 561

Query:   226 VGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSAT 285
             V TPGR+ D+++   ++  +V  +VLDEAD+ML +GF   +  I+  +P  RQ++M++AT
Sbjct:   562 VATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 621

Query:   286 MPPWIRSLTNKYLKNPLTVDLVGDSDQKLAD-GISLYSIATSMYEKPSIIGQLITEHAKG 344
              P  +R + +  L NP+ V+ +G  D+  A+  I+ Y       EK   + Q++    +G
Sbjct:   622 WPKEVRKIASDLLVNPVQVN-IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERG 680

Query:   345 GKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAA 404
              K I+F  TKR  D LA ++ + +    +HGD +Q +R+  L+ FR G+  +LIATDVAA
Sbjct:   681 SKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 740

Query:   405 RGLD 408
             RGLD
Sbjct:   741 RGLD 744


>TIGR_CMR|DET_0183 [details] [associations]
            symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:243164 "Dehalococcoides ethenogenes 195"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
            STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
            OMA:NFAPAVM ProtClustDB:CLSK837629
            BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
        Length = 560

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 113/313 (36%), Positives = 181/313 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +     + +  ++A +   G  +  PIQ   + P ++G D+IG A+TGTGKT A+ +P++
Sbjct:     1 MSFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMR 216
              K++  +   GR R    LVLAPTRELA Q+ + F        +    +YGG  +  Q+R
Sbjct:    61 QKML--STPRGRVRT---LVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIR 115

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD VV  PGR++D I R  +++  V+ +++DEAD+M  +GF  D++ IL+ L Q 
Sbjct:   116 RLRSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQP 175

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
              Q+++FSATMPP +R LT +   NP+T+  +G      +   S+Y +     + P +I  
Sbjct:   176 HQTLLFSATMPPEVRKLTLETQTNPVTIQ-IGTQAPASSVSHSVYPVKNHQ-KTPLLIEI 233

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 395
             L T   K    ++F +TK  A+ LA  ++++ +    L G++SQ++R   +  FR G F 
Sbjct:   234 LKTTETKS--VLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFK 291

Query:   396 ILIATDVAARGLD 408
             IL+ATD+AARGLD
Sbjct:   292 ILVATDIAARGLD 304


>UNIPROTKB|Q3AFI3 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 117/313 (37%), Positives = 180/313 (57%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             +  KL +   ++ A+   G     PIQK  +   ++G +++G+A TGTGKT A+ +P+L 
Sbjct:     3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62

Query:   160 KIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDT--ICVYGGTPISHQMRA 217
             +I        RG+    L++ PTRELA QV  E  +    L    + VYGG  I  Q+R 
Sbjct:    63 RI-------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRG 115

Query:   218 LDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR 277
             L  GV+ +VGTPGR++D I R     +E++ V+LDEAD+ML +GF +D+E IL  L   +
Sbjct:   116 LRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQ 175

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             Q+++FSAT+P  I+++  K+L    TV LVG   +K    I    +   + E   I G +
Sbjct:   176 QTLLFSATLPAPIKTIIKKFLGGYKTVKLVGR--EKTVPAIR--QVYYELPETEKIEGLV 231

Query:   338 -ITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFN 395
              I       + IVF +TK+  D +   +  + Y  + LHGD+SQ +R +T+ +F+ G+  
Sbjct:   232 SILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTE 291

Query:   396 ILIATDVAARGLD 408
             +L+ATDVAARGLD
Sbjct:   292 LLVATDVAARGLD 304


>TIGR_CMR|CHY_0229 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 117/313 (37%), Positives = 180/313 (57%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             +  KL +   ++ A+   G     PIQK  +   ++G +++G+A TGTGKT A+ +P+L 
Sbjct:     3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62

Query:   160 KIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDT--ICVYGGTPISHQMRA 217
             +I        RG+    L++ PTRELA QV  E  +    L    + VYGG  I  Q+R 
Sbjct:    63 RI-------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRG 115

Query:   218 LDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR 277
             L  GV+ +VGTPGR++D I R     +E++ V+LDEAD+ML +GF +D+E IL  L   +
Sbjct:   116 LRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQ 175

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             Q+++FSAT+P  I+++  K+L    TV LVG   +K    I    +   + E   I G +
Sbjct:   176 QTLLFSATLPAPIKTIIKKFLGGYKTVKLVGR--EKTVPAIR--QVYYELPETEKIEGLV 231

Query:   338 -ITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFN 395
              I       + IVF +TK+  D +   +  + Y  + LHGD+SQ +R +T+ +F+ G+  
Sbjct:   232 SILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTE 291

Query:   396 ILIATDVAARGLD 408
             +L+ATDVAARGLD
Sbjct:   292 LLVATDVAARGLD 304


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 113/314 (35%), Positives = 188/314 (59%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S L +S  +  A++ +G     PIQ   +   + G+D++  A+TGTGKT  F +P+L
Sbjct:     1 MSFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60

Query:   159 DKIIKFNE-KHGRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQM 215
             + + K ++ K G+ R    LVL PTRELA QV +  E +     L +  V+GG PI+ Q+
Sbjct:    61 ELLAKGHKAKSGQTR---ALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQI 117

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
               L +GVD +V TPGR++DL+++NA+  ++++ +VLDEAD+ML +GF  D++ IL  LP 
Sbjct:   118 NKLRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPA 177

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
              RQ++MFSAT    IR L    + +P+ + +   +    A  +  +       +K +++ 
Sbjct:   178 KRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRN--AAATTVKQWICPVDKTQKSALLI 235

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             QLI +     + +VF++TK  A+RLA ++ ++  +   +HG+ SQ  R + L+ F+ G  
Sbjct:   236 QLIKQE-NWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEV 294

Query:   395 NILIATDVAARGLD 408
              +L+ATD+AARGLD
Sbjct:   295 RVLVATDIAARGLD 308


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 121/309 (39%), Positives = 184/309 (59%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++ AL  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:    99 QYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 155

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   156 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 215

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   216 ICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 275

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++ + ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   276 ATWPKEVRQLAEDFLQDYVQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 333

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   334 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 393

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   394 TDVASRGLD 402


>TIGR_CMR|CPS_1418 [details] [associations]
            symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
            GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
            BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
        Length = 401

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 111/316 (35%), Positives = 182/316 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S L +S  I+ A+A  G +K   IQ+  +   + G+D+I  A+TGTGKT +F +P+L
Sbjct:     1 MSFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLL 60

Query:   159 DKI-IKFNE--KHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISH 213
             +++  ++ E  K  R +    L+L PTRELA QVE    + A  LD  ++ +YGG     
Sbjct:    61 EQLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQE 120

Query:   214 QMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL 273
             Q + L +GVD +V TPGR++D+  +  L+  E+  +VLDEAD+ML +GF +D+  I+ERL
Sbjct:   121 QKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERL 180

Query:   274 PQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSI 333
             P++RQ+++FSATM   +R L  + +  P+ + +  D   K    I  + +      K ++
Sbjct:   181 PEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASK--PKIEQWLVTVDKANKSAL 238

Query:   334 IGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDG 392
             +  +IT      + ++F +TK  A +L   + K     E +H   +Q  RE+ L+ F+ G
Sbjct:   239 LSHIITTQ-NWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSG 297

Query:   393 RFNILIATDVAARGLD 408
             +   L+AT +AARGLD
Sbjct:   298 KIKFLVATAIAARGLD 313


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 124/364 (34%), Positives = 200/364 (54%)

Query:    65 ISRPLDFKSSIAWQHAQSAVDDYV-----AYDDSSKDEGLDISKLDISQDIVAALARRGI 119
             I++P    ++ +  + + A D Y+     ++ D    E L +  L   +  V+A  R G+
Sbjct:   124 IAQPAIGSANASNHNDEEAYDRYIKKHNISFADPKSSENL-LPILQFDELDVSAKLREGL 182

Query:   120 SKL---FPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLC 176
                    PIQ A     + GRD++G A TG+GKT+AFGIP L  +   ++       P  
Sbjct:   183 KNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSV---PRV 239

Query:   177 LVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVID 234
             LV++PTRELA Q  +  +      +L  + VYGG P S Q RA       ++GTPGR++D
Sbjct:   240 LVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAAK-NASVIIGTPGRLLD 298

Query:   235 LIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ-----NRQSMMFSATMPPW 289
             LI   +++ S+V ++VLDEAD+ML  GF +D+  I+   P      +RQ++ FSAT P  
Sbjct:   299 LINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPES 358

Query:   290 IRSLTNKYLKNPLTVDLVGDSDQKLADGIS-LYSIATSMYEKPSIIGQLITEH-AKGGK- 346
             +R+L   +LK+P+ +  +G  +   +  I+ +  I      K  ++  L+ +H + GGK 
Sbjct:   359 VRALAATFLKDPVKIT-IGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKD 417

Query:   347 --CIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAA 404
                ++F   K++A R+   +A+ YN   +HGD+SQ  R + L+ F+ G+  +L+ATDVAA
Sbjct:   418 DKILIFVLYKKEAARVEGTLARKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAA 477

Query:   405 RGLD 408
             RGLD
Sbjct:   478 RGLD 481


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 129/380 (33%), Positives = 213/380 (56%)

Query:    38 AKSGPVIPRHDDIIKSRFSAGTREFHAISRPLDFKSSIAWQHAQSAVDDYVAYDDSSKDE 97
             ++S PV P  +D   S     + +  ++S+  D    ++    +  V+D      SS   
Sbjct:   100 SESSPVEPAANDSSSSTNYTQSSKLSSVSQS-DIDKFLS--DNEITVEDP---SSSSLRP 153

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
              L   ++ ++  I + L++    K  PIQ       + G+D+IG A TG+GKT AFG+P 
Sbjct:   154 ILSFDQVQLTSAITSKLSK--FDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPA 211

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE-SAPS-LDTICVYGGTPISHQM 215
             ++ II      G  +    L ++PTRELA Q+     E +A S ++ + VYGG     Q+
Sbjct:   212 INNIITT----GNTKTLSVLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQI 267

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             R +    + VV TPGR++DLI   A+NL +V ++VLDEAD+ML  GF ED++ I+     
Sbjct:   268 RKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTSN 326

Query:   276 N-RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADG-ISLYSIATSMYEKPSI 333
             + RQ++MF+AT P  +R L N ++ +P+ V  VGD D+  A+  I+      + ++K   
Sbjct:   327 SERQTLMFTATWPKEVRELANNFMNSPVKVT-VGDRDELSANKRITQVVEVINKFDKEKK 385

Query:   334 IGQLITEH----AKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSA 388
             + QL+ ++    +   K ++F   K++A R+ + + ++ ++   +HGD+SQ QR   LSA
Sbjct:   386 LIQLLRKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSA 445

Query:   389 FRDGRFNILIATDVAARGLD 408
             F+ G+ N+L+ATDVAARGLD
Sbjct:   446 FKSGQSNLLLATDVAARGLD 465


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 119/302 (39%), Positives = 171/302 (56%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++ ++ + G  K  PIQ       +QG D+IG A+TGTGKTL++ +P    +       
Sbjct:   234 ELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNSQPVSR 293

Query:   169 GRGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVDAVVG 227
             G+   P  LVL PTRELA QV  E  + S   L ++C+YGG     Q++ +  GVD ++ 
Sbjct:   294 GKRNGPGMLVLTPTRELALQVGAECSKYSYKGLKSVCIYGGGNRKGQIQDIMKGVDIIIA 353

Query:   228 TPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMP 287
             TPGR+ DL   N +NL  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M SAT P
Sbjct:   354 TPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIMTSATWP 413

Query:   288 PWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKC 347
               IR L + YLK P+ V  VG  D    D +    I T+  EK S+  + +   +   K 
Sbjct:   414 DTIRQLAHSYLKEPMLV-YVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKDKV 472

Query:   348 IVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARG 406
             IVF   K  AD L+  ++ +    + LHGD  QS RER L  F+ G+  ILIATD+A+RG
Sbjct:   473 IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRG 532

Query:   407 LD 408
             LD
Sbjct:   533 LD 534


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 119/302 (39%), Positives = 171/302 (56%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++ ++ + G  K  PIQ       +QG D+IG A+TGTGKTL++ +P    +       
Sbjct:   225 ELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNSQPVSR 284

Query:   169 GRGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVDAVVG 227
             G+   P  LVL PTRELA QV  E  + S   L ++C+YGG     Q++ +  GVD ++ 
Sbjct:   285 GKRNGPGMLVLTPTRELALQVGAECSKYSYKGLKSVCIYGGGNRKGQIQDIMKGVDIIIA 344

Query:   228 TPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMP 287
             TPGR+ DL   N +NL  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M SAT P
Sbjct:   345 TPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIMTSATWP 404

Query:   288 PWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKC 347
               IR L + YLK P+ V  VG  D    D +    I T+  EK S+  + +   +   K 
Sbjct:   405 DTIRQLAHSYLKEPMLV-YVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKDKV 463

Query:   348 IVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARG 406
             IVF   K  AD L+  ++ +    + LHGD  QS RER L  F+ G+  ILIATD+A+RG
Sbjct:   464 IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRG 523

Query:   407 LD 408
             LD
Sbjct:   524 LD 525


>TIGR_CMR|SPO_3833 [details] [associations]
            symbol:SPO_3833 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K05592 InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_169021.1
            ProteinModelPortal:Q5LLT8 GeneID:3196362 KEGG:sil:SPO3833
            PATRIC:23381169 HOGENOM:HOG000268794 OMA:MQHRSGR Uniprot:Q5LLT8
        Length = 709

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 131/376 (34%), Positives = 198/376 (52%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             LDI  +  +  ++ ALA RG   L  +Q+AV +P +   D++  ARTG+GKT+ FG+ I 
Sbjct:    23 LDIPLM--TSPLLDALAERGFDTLTDVQQAVTDPELASADLLVSARTGSGKTVGFGLAIA 80

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKE----FHESAPSLDTICVYGGTPISHQ 214
               ++   E  G    PL L++APTRELA QV +E    F ++   + T C+ GG     +
Sbjct:    81 PTLLGEAETLGPPAAPLALIVAPTRELALQVSRELTWLFAKAGGRIAT-CI-GGMDARTE 138

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
              R L+ G   VVGTPGR+ D I R AL+L++++ VVLDEAD+ML +GF ED+E +L   P
Sbjct:   139 RRTLERGAHIVVGTPGRLRDHITRGALDLADIRAVVLDEADEMLDLGFREDLEFMLGEAP 198

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSII 334
             ++R++++FSAT+ P I  L   Y +    +  +G   Q  +D IS  ++  S  +    I
Sbjct:   199 EDRRTLLFSATVSPAIAELAKTYQRQAARISTLGGERQH-SD-ISYQAVQVSGGDGEHAI 256

Query:   335 GQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGR 393
               L+  H      IVF  T+    RL   +A + +    L G++SQ +R   L A RDGR
Sbjct:   257 INLLRFH-DAPTAIVFANTRAAVARLTARLANRGFAVVSLSGELSQDERSHALQAMRDGR 315

Query:   394 FNILIATDVAARGLDXXXXXXXXXXXXXXXXXQFL--STQISRPGKSRVLSEMLDADLLS 451
               + +ATDVAARG+D                   L  S +  R G+  + S ++  D +S
Sbjct:   316 ARVCVATDVAARGIDLPNLDLVIHADLPTNTEGLLHRSGRTGRAGRKGI-SALIVPDKIS 374

Query:   452 SQGSPLKEVETCTMTW 467
              + S L +       W
Sbjct:   375 KKASRLLKWAKIEAEW 390


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 130/344 (37%), Positives = 199/344 (57%)

Query:    86 DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGR 142
             D +  D S KD     LD S   + + ++  +     +K  P+QK  +    +GRD++  
Sbjct:   138 DNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMAC 197

Query:   143 ARTGTGKTLAFGIPILDKIIKFN-----EK----HGRGRNPLCLVLAPTRELAKQVEKEF 193
             A+TG+GKT  F  P+  ++ +       EK    + R   P  LVLAPTRELA Q+ +E 
Sbjct:   198 AQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEA 257

Query:   194 HE-SAPSLDTICV-YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVL 251
              + +  S    CV YGG PI +QMR +D G D +V TPGR+ DL++R  ++L+ ++++VL
Sbjct:   258 RKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVL 317

Query:   252 DEADQMLSVGFAEDVEVILER--LP--QNRQSMMFSATMPPWIRSLTNKYLKNP--LTVD 305
             DEAD+ML +GF   +  I+E   +P  +NRQ++MFSAT P  I+ L   +L N   L+V 
Sbjct:   318 DEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVG 377

Query:   306 LVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA 365
              VG + + +   I LY     M +K +++  L  EH   G  ++F +TKR AD+L   + 
Sbjct:   378 RVGSTSENITQRI-LY--VDDMDKKSALLDLLSAEHK--GLTLIFVETKRMADQLTDFLI 432

Query:   366 -KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
              +++    +HGD +Q++RER LSAF+    +IL+AT VAARGLD
Sbjct:   433 MQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLD 476


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 120/343 (34%), Positives = 196/343 (57%)

Query:    81 QSAVDDYVAYDDSSKDEGLDISKLDI-SQDIVA--ALARRGISKL---FPIQKAVLEPAM 134
             QS +D+Y   ++ + ++ LD++   + S D ++  +  +  ISK     PIQ       +
Sbjct:    88 QSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISKFPKPTPIQAVAWPYLL 147

Query:   135 QGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFH 194
              G+D++G A TG+GKT AFG+P +  ++  N++  RG     LV++PTRELA Q+     
Sbjct:   148 SGKDVVGVAETGSGKTFAFGVPAISHLM--NDQKKRGIQ--VLVISPTRELASQIYDNLI 203

Query:   195 --ESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLD 252
                    +   CVYGG P   Q   L      VV TPGR++DL++  +++LS+V ++VLD
Sbjct:   204 VLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLD 262

Query:   253 EADQMLSVGFAEDVE-VILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSD 311
             EAD+ML  GF ED++ +I E     RQ++MF+AT P  +R L + ++ NP+ V  +G++D
Sbjct:   263 EADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVS-IGNTD 321

Query:   312 QKLADG--ISLYSIATSMYEKPSIIGQLITEHA---KGGKCIVFTQTKRDADRLAHAMA- 365
             Q  A+     +  +     ++  ++  L   H+   K  K ++F   K++A R+   +  
Sbjct:   322 QLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKY 381

Query:   366 KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               YN   +HGD+SQ QR + L+ F+ G+ N+L+ATDVAARGLD
Sbjct:   382 NGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLD 424


>TIGR_CMR|GSU_0522 [details] [associations]
            symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
            RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
            KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
            BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
        Length = 443

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 116/317 (36%), Positives = 184/317 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  + L++ + ++  +A  G S   PIQ+  L  ++ G+D+ G+A+TGTGKT AF I + 
Sbjct:     1 MKFADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLF 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TI-CVYGGTPISHQMR 216
              K+++ + + G  R+P  ++LAPTREL  Q+EK+          TI  +YGG     Q  
Sbjct:    61 TKLLR-SGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKN 119

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP-- 274
             AL  G D VVGTPGR+ID +K+   +L E++ +V+DEAD+M  +GF  D+  IL RLP  
Sbjct:   120 ALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPY 179

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIS--LYSIATSMYEK-P 331
               RQ++MFSAT+   +  L  +++  P  V +    +Q  A+ +   LY +     EK P
Sbjct:   180 DKRQNLMFSATLNQRVMELAYEFMNVPEKVAVT--PEQMTAERVEQVLYHVGRK--EKFP 235

Query:   332 SIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFR 390
              ++G L  E  +  + ++F  TKR+A+ L   + A  + C  + GD+ Q +R + L  F+
Sbjct:   236 LLLGLLRKEGME--RTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFK 293

Query:   391 DGRFNILIATDVAARGL 407
              G+  I+IATDVA+RGL
Sbjct:   294 SGKLPIMIATDVASRGL 310


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 157

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   158 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 217

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   218 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   278 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 335

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   336 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 395

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   396 TDVASRGLD 404


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 157

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   158 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 217

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   218 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   278 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 335

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   336 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 395

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   396 TDVASRGLD 404


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 157

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   158 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 217

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   218 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   278 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 335

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   336 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 395

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   396 TDVASRGLD 404


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 498 (180.4 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 118/319 (36%), Positives = 179/319 (56%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             D S++ +   ++  + R+G      IQ      AM G + +G A+TG+GKTL +   IL 
Sbjct:   282 DFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGY---ILP 338

Query:   160 KIIKFNEKHG--RGRNPLCLVLAPTRELAKQVEK---EFHESAPSLDTICVYGGTPISHQ 214
              I+  N +    RG  P+ LVLAPTRELA+Q+++   EF  S+   +T CV+GG P   Q
Sbjct:   339 AIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNT-CVFGGAPKGGQ 397

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             MR L  G + V+ TPGR+ID +   + NL    ++VLDEAD+ML +GF   +  I+ ++ 
Sbjct:   398 MRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIR 457

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIAT--SMYEK- 330
              +RQ++M+SAT P  ++ L   +L N + ++ +G  +      I  +  +    S  EK 
Sbjct:   458 PDRQTLMWSATWPKEVKQLAEDFLGNYIQIN-IGSLELSANHNIRQVVDVCDEFSKEEKL 516

Query:   331 PSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAF 389
              +++  +       GK I+F +TKR  D L   +      C  +HGD SQS+R+  L  F
Sbjct:   517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576

Query:   390 RDGRFNILIATDVAARGLD 408
             R G+ NIL+ATDVAARGLD
Sbjct:   577 RSGKSNILVATDVAARGLD 595


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 117/368 (31%), Positives = 197/368 (53%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S L ++  +V  LA  G  +  PIQ   +   +  +D++  A+TGTGKT AF +PIL
Sbjct:     1 MSFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMR 216
               ++  N+     +    LVL PTRELA QV++ F + A   D      YGG  I  Q  
Sbjct:    61 QLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQA 120

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
               + G+D ++ TPGR++D +++ ALNL+++  +V DEAD+ML +GF ++++ +L+++P  
Sbjct:   121 VFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQ 180

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ+++FSAT+   I S +   L++P  +++   +         +Y+I +    K   +  
Sbjct:   181 RQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSD--RKTEFVSH 238

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             L+       + ++F++TK+  D+L   + K     +  HGD+SQ  RE+ L  F+ G   
Sbjct:   239 LVRSK-NWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQ 297

Query:   396 ILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEMLDADLLSSQGS 455
             +L+ATDVAARGLD                  ++  +I R G++   S  L   L S + +
Sbjct:   298 VLVATDVAARGLDIAELQYVINFELPFIAEDYIH-RIGRTGRAG--SAGLAITLFSQEDA 354

Query:   456 PL-KEVET 462
              L +EVET
Sbjct:   355 LLLEEVET 362


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 117/368 (31%), Positives = 197/368 (53%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S L ++  +V  LA  G  +  PIQ   +   +  +D++  A+TGTGKT AF +PIL
Sbjct:     1 MSFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMR 216
               ++  N+     +    LVL PTRELA QV++ F + A   D      YGG  I  Q  
Sbjct:    61 QLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQA 120

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
               + G+D ++ TPGR++D +++ ALNL+++  +V DEAD+ML +GF ++++ +L+++P  
Sbjct:   121 VFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQ 180

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ+++FSAT+   I S +   L++P  +++   +         +Y+I +    K   +  
Sbjct:   181 RQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSD--RKTEFVSH 238

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             L+       + ++F++TK+  D+L   + K     +  HGD+SQ  RE+ L  F+ G   
Sbjct:   239 LVRSK-NWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQ 297

Query:   396 ILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEMLDADLLSSQGS 455
             +L+ATDVAARGLD                  ++  +I R G++   S  L   L S + +
Sbjct:   298 VLVATDVAARGLDIAELQYVINFELPFIAEDYIH-RIGRTGRAG--SAGLAITLFSQEDA 354

Query:   456 PL-KEVET 462
              L +EVET
Sbjct:   355 LLLEEVET 362


>UNIPROTKB|E1BSC0 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
            IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
        Length = 1031

 Score = 505 (182.8 bits), Expect = 2.3e-47, P = 2.3e-47
 Identities = 117/309 (37%), Positives = 173/309 (55%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ AL + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   378 ISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 437

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   438 ALE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 496

Query:   224 AVVGTPGRVIDLIKRN---ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N     NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   497 IIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 556

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +  + I      K   + +L+  
Sbjct:   557 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQHVIVIEEENKFLKLLELLGH 614

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   615 YQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVA 674

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   675 TSVAARGLD 683


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 501 (181.4 bits), Expect = 2.5e-47, P = 2.5e-47
 Identities = 114/305 (37%), Positives = 182/305 (59%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHG 169
             ++  + ++G +K   IQ      AM GRD++G A+TG+GKTLA+ +P +  I     +  
Sbjct:   168 VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINN-QPRLE 226

Query:   170 RGRNPLCLVLAPTRELAKQVEK---EFHESAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
             RG  P+ LVLAPTRELA+Q+++   EF  +    +T C++GG P   Q R L+ GV+ V+
Sbjct:   227 RGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNT-CIFGGAPKGQQARDLERGVEIVI 285

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATM 286
              TPGR+ID ++R   +L    ++VLDEAD+ML +GF   +  I++++  +RQ +M+SAT 
Sbjct:   286 ATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATW 345

Query:   287 PPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGG- 345
             P  +R L  ++L N + V+ +G         I          EK   + +L+T+ +    
Sbjct:   346 PKEVRQLAEEFLNNYIQVN-IGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENE 404

Query:   346 -KCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVA 403
              K I+F +TK+  D +   +++  +    +HGD SQ +R+  LS+FR+GR +IL+ATDVA
Sbjct:   405 TKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVA 464

Query:   404 ARGLD 408
             ARGLD
Sbjct:   465 ARGLD 469


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 497 (180.0 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   180 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 236

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   237 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 296

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   297 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 356

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   357 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 414

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   415 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 474

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   475 TDVASRGLD 483


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 497 (180.0 bits), Expect = 2.7e-47, P = 2.7e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   180 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 236

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   237 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 296

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   297 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 356

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   357 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 414

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   415 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 474

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   475 TDVASRGLD 483


>FB|FBgn0029979 [details] [associations]
            symbol:CG10777 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
            GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
            RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
            MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
            KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
            InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
            NextBio:774939 Uniprot:Q9W3M7
        Length = 945

 Score = 503 (182.1 bits), Expect = 2.9e-47, P = 2.9e-47
 Identities = 117/312 (37%), Positives = 184/312 (58%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHG 169
             ++  + R+G +K   IQ      A+ GRD++G A+TG+GKTLA+ +P +  I        
Sbjct:   248 VIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGN-QPPII 306

Query:   170 RGRNPLCLVLAPTRELAKQVE---KEF-HESAPSLDTICVYGGTPISHQMRALDYGVDAV 225
             RG  P+ LVLAPTRELA+Q++   +++ H   P +   C++GG+    Q R LD GV+ +
Sbjct:   307 RGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVI 366

Query:   226 VGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSAT 285
             + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I+E++  +RQ +M+SAT
Sbjct:   367 IATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSAT 426

Query:   286 MPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSIIGQLITEHA-- 342
              P  +++L   +L + + ++ +G  +      I  +  I T + EKP  +  L+ E +  
Sbjct:   427 WPKEVQALAGDFLNDYIQIN-IGSMNLSANHNIRQIVEICTEI-EKPQRLVCLLNEISPI 484

Query:   343 -----KGGKCIVFTQTK-RDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNI 396
                   G K IVF +TK +  D L    A+ YN   +HGD +Q++R+  L  FR+G+ NI
Sbjct:   485 KNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNI 544

Query:   397 LIATDVAARGLD 408
             LIATDVA+RGLD
Sbjct:   545 LIATDVASRGLD 556


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 497 (180.0 bits), Expect = 3.0e-47, P = 3.0e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   182 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 238

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   239 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 298

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   299 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 358

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   359 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 416

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   417 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 476

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   477 TDVASRGLD 485


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 497 (180.0 bits), Expect = 3.0e-47, P = 3.0e-47
 Identities = 120/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   182 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 238

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   239 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 298

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   299 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 358

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   359 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 416

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   417 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 476

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   477 TDVASRGLD 485


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 115/309 (37%), Positives = 179/309 (57%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q +++ +  +G  K   IQ      A+ GRD++G A TG+GKTL++ +P    I+  N +
Sbjct:   149 QYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPA---IVHINAQ 205

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVD 223
                  G  P+ L+LAPTRELA Q++ E  +   S  +   CVYGG P   Q+R L  GV+
Sbjct:   206 PLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVE 265

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID+++    NL  V ++VLDEAD+ML +GF   +  I+ ++  +RQ+ M+S
Sbjct:   266 VCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWS 325

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPS-IIGQL--ITE 340
             AT P  +R L + +L N + V+ +G  D      I+      S +EK   +I  L  I E
Sbjct:   326 ATWPKEVRQLASDFLNNYIQVN-IGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIME 384

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + +G KC+VFT TKR AD +   + +  +    +HGD  Q +R+  L+ F+ G+  I++A
Sbjct:   385 N-RGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVA 443

Query:   400 TDVAARGLD 408
             TDVA+RG+D
Sbjct:   444 TDVASRGID 452


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 404 (147.3 bits), Expect = 3.9e-47, Sum P(2) = 3.9e-47
 Identities = 102/254 (40%), Positives = 144/254 (56%)

Query:   165 NEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YGGTPISHQMRALDYG 221
             N K+GR +  P+ LVLAPTRELA Q+  E  + S  S    CV YGG  I  Q+R L+ G
Sbjct:   289 NGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERG 348

Query:   222 VDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LPQN--R 277
                +V TPGR++D+++R  + L    ++VLDEAD+ML +GF   +  I+E+  +P    R
Sbjct:   349 CHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLR 408

Query:   278 QSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             Q+MMFSAT P  I+ L   +L++   L V  VG + + +   +    +     +K S + 
Sbjct:   409 QTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKV----VWVEENDKRSFLL 464

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
              L+    K    +VF +TK+ AD L   + +  Y C  +HGD SQ  RE  L  FR GR 
Sbjct:   465 DLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRC 524

Query:   395 NILIATDVAARGLD 408
              IL+AT VAARGLD
Sbjct:   525 PILVATAVAARGLD 538

 Score = 118 (46.6 bits), Expect = 3.9e-47, Sum P(2) = 3.9e-47
 Identities = 35/105 (33%), Positives = 56/105 (53%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII- 162
             L++ + I+  +     ++  P+QK  +      RD++  A+TG+GKT AF +P+L +I  
Sbjct:   213 LEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYT 272

Query:   163 --------------KFNEKHGRGRN-PLCLVLAPTRELAKQVEKE 192
                           + N K+GR +  P+ LVLAPTRELA Q+  E
Sbjct:   273 DGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELALQIYDE 317


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 115/311 (36%), Positives = 183/311 (58%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L +S +++ A+  +G  +  P+Q+  +   +Q RD++  A+TGTGKT  F +P+L ++  
Sbjct:    15 LGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFV 74

Query:   164 FNEKHGRGRNPL--CLVLAPTRELAKQV-E--KEFHESAPSLDTICVYGGTPISHQMRAL 218
                   R   P+   L+L PTRELA QV E  + + +  P   T+ V+GG  I  Q+  L
Sbjct:    75 SRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATV-VHGGVSIKPQINHL 133

Query:   219 DYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQ 278
               GVD +V TPGR++DL+ +  LNLS V+F VLDEAD+ML +GF  D+  IL+ LP++RQ
Sbjct:   134 RRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQ 193

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +++FSAT    I+ LT+K L +P  +++   +    A  I+          K  ++  +I
Sbjct:   194 NLLFSATFSKEIKELTDKLLHSPALIEVARRNTA--AARITHVVHPVDRQRKRELLSFMI 251

Query:   339 TEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
                    + +VFT+TK  A+RL+  + +   +   +HG+ SQ+ R R L+ F+ G+  +L
Sbjct:   252 GSK-NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVL 310

Query:   398 IATDVAARGLD 408
             +ATDVAARGLD
Sbjct:   311 VATDVAARGLD 321


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 115/311 (36%), Positives = 183/311 (58%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L +S +++ A+  +G  +  P+Q+  +   +Q RD++  A+TGTGKT  F +P+L ++  
Sbjct:    15 LGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFV 74

Query:   164 FNEKHGRGRNPL--CLVLAPTRELAKQV-E--KEFHESAPSLDTICVYGGTPISHQMRAL 218
                   R   P+   L+L PTRELA QV E  + + +  P   T+ V+GG  I  Q+  L
Sbjct:    75 SRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATV-VHGGVSIKPQINHL 133

Query:   219 DYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQ 278
               GVD +V TPGR++DL+ +  LNLS V+F VLDEAD+ML +GF  D+  IL+ LP++RQ
Sbjct:   134 RRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQ 193

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +++FSAT    I+ LT+K L +P  +++   +    A  I+          K  ++  +I
Sbjct:   194 NLLFSATFSKEIKELTDKLLHSPALIEVARRNTA--AARITHVVHPVDRQRKRELLSFMI 251

Query:   339 TEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
                    + +VFT+TK  A+RL+  + +   +   +HG+ SQ+ R R L+ F+ G+  +L
Sbjct:   252 GSK-NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVL 310

Query:   398 IATDVAARGLD 408
             +ATDVAARGLD
Sbjct:   311 VATDVAARGLD 321


>UNIPROTKB|Q7L014 [details] [associations]
            symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
            IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
            ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
            MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
            PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
            Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
            KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
            HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
            PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
            NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
            CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
            Uniprot:Q7L014
        Length = 1031

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>UNIPROTKB|F1MX40 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
            EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
            Uniprot:F1MX40
        Length = 1032

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>UNIPROTKB|F1PK90 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
            Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
        Length = 1032

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>UNIPROTKB|I3LR20 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
            Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
        Length = 1032

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>MGI|MGI:1920895 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
            EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
            UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
            STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
            Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
            UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
            Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
            GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
        Length = 1032

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>RGD|708480 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
            HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
            EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
            RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
            STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
            Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
            UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>UNIPROTKB|Q62780 [details] [associations]
            symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
            PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
            ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
            PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
            KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 502 (181.8 bits), Expect = 4.9e-47, P = 4.9e-47
 Identities = 116/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  I+ +L + G  K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                  G  P+ +++ PTRELA Q+ KE  + + +L    +CVYGGT IS Q+  L  G +
Sbjct:   439 SLE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +    I     +K   + +L+  
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGH 615

Query:   341 HAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L    M  SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   676 TSVAARGLD 684


>UNIPROTKB|F1MBQ8 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
            class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IEA] [GO:0036002
            "pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
            GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
            EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
            UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
            Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
            NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
        Length = 614

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>UNIPROTKB|F1PEA6 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] [GO:0003712 "transcription cofactor
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
            Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
        Length = 671

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:   151 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 209

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   210 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 267

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   268 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 327

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   328 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 385

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   386 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 445

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   446 HGKAPILIATDVASRGLD 463


>UNIPROTKB|J3KTA4 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
            Ensembl:ENST00000578804 Uniprot:J3KTA4
        Length = 614

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>UNIPROTKB|P17844 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0045069 "regulation of viral genome replication"
            evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
            [GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IMP] [GO:0072332
            "intrinsic apoptotic signaling pathway by p53 class mediator"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
            "regulation of skeletal muscle cell differentiation" evidence=ISS]
            [GO:0045667 "regulation of osteoblast differentiation"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0050681
            "androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
            of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
            "positive regulation of intracellular estrogen receptor signaling
            pathway" evidence=IDA] [GO:0003713 "transcription coactivator
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
            "pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
            GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
            GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
            GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
            EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
            RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
            PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
            IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
            DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
            PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
            Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
            CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
            HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
            InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
            EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
            ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
            Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
        Length = 614

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>UNIPROTKB|Q0C4B9 [details] [associations]
            symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
            GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
            BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
        Length = 536

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 112/310 (36%), Positives = 181/310 (58%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             ++++I+ A+   G +   PIQ+  +   + G D+ G A+TGTGKT AF +P++ ++   +
Sbjct:    11 LAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQRL---S 67

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TICVY-GGTPISHQMRALDYGVD 223
                 R R P CL+L PTRELA QV + F +    L  T+ +  GG     Q   L  GVD
Sbjct:    68 TGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRGVD 127

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
              ++ TPGR++D   R  L +  V+ +++DEAD+ML +GF  D+E I  +LP NRQ+++FS
Sbjct:   128 VLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLLFS 187

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE---KPSIIGQLI-T 339
             AT P  I+ L   + K+P  +++   +  + A+ IS + +     +   + + + ++I  
Sbjct:   188 ATFPTDIQRLAKTFQKDPKKIEVTRPA--QTAETISQFVVKLPTNDGKARRTALRRVIEA 245

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
              + K G  IVF   K + D +A ++ K  ++  P+HGD+ QS R  TL  FRDG+  +L+
Sbjct:   246 TNVKNG--IVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLV 303

Query:   399 ATDVAARGLD 408
             A+DVAARGLD
Sbjct:   304 ASDVAARGLD 313


>UNIPROTKB|Q5R4I9 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
            GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
            RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
            PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
            Uniprot:Q5R4I9
        Length = 614

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>MGI|MGI:105037 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0060765 "regulation of androgen receptor signaling pathway"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
            p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
            GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
            ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
            UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
            DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
            PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
            Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
        Length = 614

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>RGD|619906 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
            activity" evidence=ISO] [GO:0003713 "transcription coactivator
            activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
            rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
            evidence=IDA] [GO:0030331 "estrogen receptor binding"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
            "pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=IDA] [GO:0050681 "androgen receptor binding"
            evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
            signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
            signaling pathway by p53 class mediator" evidence=IEA;ISO]
            [GO:2001014 "regulation of skeletal muscle cell differentiation"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
            GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
            EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
            UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
            Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
            UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
            Genevestigator:Q6AYI1 Uniprot:Q6AYI1
        Length = 615

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>ZFIN|ZDB-GENE-030131-667 [details] [associations]
            symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
            pancreas development" evidence=IMP] [GO:0007420 "brain development"
            evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
            evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
            GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
            GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
            EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
            ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
        Length = 1035

 Score = 501 (181.4 bits), Expect = 6.4e-47, P = 6.4e-47
 Identities = 115/309 (37%), Positives = 174/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             IS  ++ AL +    K  PIQ   +   M GRD+IG A+TG+GKT+AF +P+   I+   
Sbjct:   364 ISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILD-Q 422

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRALDYGVD 223
                G    PL +++ PTRELA Q+ KE  + + SL    +CVYGGT IS Q+  L  G +
Sbjct:   423 RPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAE 482

Query:   224 AVVGTPGRVIDLIKRN---ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N     NL  V +VV+DEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   483 IIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTV 542

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + L  P+ V + G S   +   +  + I     +K   + +++  
Sbjct:   543 MFSATFPRTMEALARRILSKPVEVQVGGRS--VVCSDVEQHVIVIEEEKKFLKLLEILGH 600

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  I+F   +  AD L   + K SY C  LHG I Q  R+  ++ F++G   +L+A
Sbjct:   601 YQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVA 660

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   661 TSVAARGLD 669


>DICTYBASE|DDB_G0281925 [details] [associations]
            symbol:DDB_G0281925 "DEAD/DEAH box helicase"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
            EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
            ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
            GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
            Uniprot:Q54T87
        Length = 586

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 118/286 (41%), Positives = 170/286 (59%)

Query:   136 GRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE 195
             G D++G A TG+GKTLAF +P L KII   ++   G  PL LV+APTRELA+Q+E+    
Sbjct:   147 GNDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKT 206

Query:   196 S--APSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDE 253
             S    S+  +C YGG     Q R L  GVD V+GTPGR+ DL++++  +LS VQ++VLDE
Sbjct:   207 SIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDE 264

Query:   254 ADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTV-----DLVG 308
             AD+ML +GF   +E +++++P+ RQ++MFSAT P  ++ L +K+LK+P+ +     +L G
Sbjct:   265 ADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTG 324

Query:   309 DSD--QKLA--DGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM 364
               +  Q +   D +S       +Y++   I +++T        IVF   K   D   H +
Sbjct:   325 SINVTQHIVNIDDLSDLQSDDLIYDE---INKILTADPTN-TVIVFCNEKYKCDDFQHYL 380

Query:   365 AKSYNCEP--LHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +   N +   LH    Q  RE  L  FRD R  ILIATDVAARGLD
Sbjct:   381 STQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIATDVAARGLD 426


>UNIPROTKB|C9JMU5 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
            HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
            STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
            ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
        Length = 652

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 119/308 (38%), Positives = 181/308 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L  +  ++  PIQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 157

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++  + +     L + C+YGG P   Q+R L+ GV+
Sbjct:   158 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVE 217

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   218 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++   ++ VG+ +      I L  +   M  EK   + QL+ E  
Sbjct:   278 ATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNI-LQIVDVCMESEKDHKLIQLMEEIM 335

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TKR  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   336 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 395

Query:   400 TDVAARGL 407
             TDVA+RGL
Sbjct:   396 TDVASRGL 403


>UNIPROTKB|A5A6J2 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
            CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
            UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
            GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
            Uniprot:A5A6J2
        Length = 614

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 117/318 (36%), Positives = 186/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>UNIPROTKB|Q8EIE5 [details] [associations]
            symbol:dbpA "ATP-dependent RNA helicase DbpA"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
            OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
            HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
            GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
        Length = 458

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 112/311 (36%), Positives = 180/311 (57%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S L +  +++  L+  G +++ PIQ   L   + G D+IG+ +TG+GKT AFG+ +L+K+
Sbjct:     4 STLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKL 63

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVY---GGTPISHQMRAL 218
                + K  R +    LVL PTRELA QV +E    A  +  + V    GG P+  Q+ +L
Sbjct:    64 ---DVKRFRIQT---LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSL 117

Query:   219 DYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQ 278
             ++G   +VGTPGR++D + RN L+LS +  +VLDEAD+ML +GF   ++ I+E+ P+ RQ
Sbjct:   118 EHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQ 177

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +++FSAT P  I+S+  + + NP+ V      ++   +    Y +      +   +  L+
Sbjct:   178 TLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQ-HFYQLDDDK-SRMQALQLLL 235

Query:   339 TEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
              EH K    +VF  TKR+  ++A  +    ++   LHGD+ Q  R+ TL  F +    +L
Sbjct:   236 LEH-KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVL 294

Query:   398 IATDVAARGLD 408
             +ATDVAARGLD
Sbjct:   295 VATDVAARGLD 305


>TIGR_CMR|SO_0897 [details] [associations]
            symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
            OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
            HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
            GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
        Length = 458

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 112/311 (36%), Positives = 180/311 (57%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S L +  +++  L+  G +++ PIQ   L   + G D+IG+ +TG+GKT AFG+ +L+K+
Sbjct:     4 STLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKL 63

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVY---GGTPISHQMRAL 218
                + K  R +    LVL PTRELA QV +E    A  +  + V    GG P+  Q+ +L
Sbjct:    64 ---DVKRFRIQT---LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSL 117

Query:   219 DYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQ 278
             ++G   +VGTPGR++D + RN L+LS +  +VLDEAD+ML +GF   ++ I+E+ P+ RQ
Sbjct:   118 EHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQ 177

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +++FSAT P  I+S+  + + NP+ V      ++   +    Y +      +   +  L+
Sbjct:   178 TLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQ-HFYQLDDDK-SRMQALQLLL 235

Query:   339 TEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
              EH K    +VF  TKR+  ++A  +    ++   LHGD+ Q  R+ TL  F +    +L
Sbjct:   236 LEH-KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVL 294

Query:   398 IATDVAARGLD 408
             +ATDVAARGLD
Sbjct:   295 VATDVAARGLD 305


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 118/309 (38%), Positives = 182/309 (58%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q ++  L ++   +   IQ      A+ GRDM+G A+TG+GKTLA+ +P    I+  N +
Sbjct:   104 QYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPA---IVHINHQ 160

Query:   168 H--GRGRNPLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDYGVD 223
                 RG  P+CLVLAPTRELA+QV++   +   S  + + CVYGG P   Q+R L+ GV+
Sbjct:   161 PYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVE 220

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
               + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+S
Sbjct:   221 ICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 280

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITE-- 340
             AT P  +R L   +L++ + ++ +G  +      I L  +   M  EK + + QL+ E  
Sbjct:   281 ATWPKEVRQLAEDFLQDYVQIN-IGALELSANHNI-LQIVDVCMENEKDNKLIQLMEEIM 338

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
               K  K I+F +TK+  D L   M +  +    +HGD SQ +R+  L+ FR G+  ILIA
Sbjct:   339 AEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIA 398

Query:   400 TDVAARGLD 408
             TDVA+RGLD
Sbjct:   399 TDVASRGLD 407


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 114/299 (38%), Positives = 179/299 (59%)

Query:   117 RGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE-KHGRGRNPL 175
             +G  K  PIQ      A+ GRDMIG A TG+GKTL++ +P +  I    + ++G G  P+
Sbjct:   145 QGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDG--PI 202

Query:   176 CLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRV 232
              LVLAPTRELA Q++ E   F +S+   +T CVYGG P   Q+R L  GV+  + TPGR+
Sbjct:   203 VLVLAPTRELAVQIQTECSKFGKSSRIRNT-CVYGGAPKGPQIRDLARGVEICIATPGRL 261

Query:   233 IDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRS 292
             ID+++    NL  V ++VLDEAD+ML +GF   +  I++++  +RQ++M+SAT P  ++ 
Sbjct:   262 IDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQ 321

Query:   293 LTNKYLKNPLTVDLVGDSDQKLADGIS-LYSIATSMYEKPSIIGQLITE-HAKGGKCIVF 350
             LT  YL +P+ V  +G  +   +  I+ L  +     ++  ++  L +  + K  K +VF
Sbjct:   322 LTRDYLNDPIQVT-IGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVF 380

Query:   351 TQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               TKR  D +  +  +  +    +HGD  Q++R+  L  FR G+ +I++ATDVAARG+D
Sbjct:   381 ASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGID 439


>UNIPROTKB|Q4R6M5 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
            HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
            Uniprot:Q4R6M5
        Length = 614

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 117/318 (36%), Positives = 185/318 (58%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L+  + +   +++  +AR+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P  
Sbjct:    94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA- 152

Query:   159 DKIIKFNEKH--GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQ 214
               I+  N +    RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q
Sbjct:   153 --IVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210

Query:   215 MRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP 274
             +R L+ GV+  + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++ 
Sbjct:   211 IRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR 270

Query:   275 QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSI 333
              +RQ++M+SAT P  +R L   +LK+ + ++ +G  +      I  +  +   + EK   
Sbjct:   271 PDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVCHDV-EKDEK 328

Query:   334 IGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFR 390
             + +L+ E    K  K IVF +TKR  D L   M +  +    +HGD SQ +R   L+ F+
Sbjct:   329 LIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFK 388

Query:   391 DGRFNILIATDVAARGLD 408
              G+  ILIATDVA+RGLD
Sbjct:   389 HGKAPILIATDVASRGLD 406


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 498 (180.4 bits), Expect = 2.0e-46, P = 2.0e-46
 Identities = 118/309 (38%), Positives = 176/309 (56%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             +S+  +  L R G  K  PIQ   +   M GRD+IG A+TG+GKTLAF +P+   I+   
Sbjct:   517 VSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQP 576

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDT--ICVYGGTPISHQMRALDYGVD 223
                  G   + +++APTREL  Q+ K+  + + SL    +CVYGGT IS Q+  L  G +
Sbjct:   577 SMED-GDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAE 635

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              +V TPGR+ID++  N+    NL  V +VVLDEAD+M  +GF   V  I++ +  +RQ++
Sbjct:   636 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 695

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             MFSAT P  + +L  + LK P+ V + G S   +   +  + +  +   K   + +L+  
Sbjct:   696 MFSATFPRQMEALARRILKKPIEVIVGGRS--VVCKEVEQHVVILNDDAKFFKLLELLGI 753

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             + + G  IVF   + +AD L   + K SY C  LHG I Q  R+ T+  F+ G+  +LIA
Sbjct:   754 YQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIA 813

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   814 TSVAARGLD 822


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 121/303 (39%), Positives = 169/303 (55%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++  + + G  K  PIQ       +QG D+IG A+TGTGKTL++ +P    I       
Sbjct:   251 EVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDS-QPVL 309

Query:   169 GRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
              R RN P  LVL PTRELA QV+ E  E S   L ++C+YGG     Q++ L  G D ++
Sbjct:   310 QRARNGPGMLVLTPTRELALQVDAECSEYSYRGLKSVCIYGGGDRDGQIKDLSKGADIII 369

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATM 286
              TPGR+ DL   N + L  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M SAT 
Sbjct:   370 ATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATW 429

Query:   287 PPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGK 346
             P  +R L   YLK P+ V  VG  D      ++   I T+  EK S I   I   +   K
Sbjct:   430 PYAVRRLAQSYLKEPMIV-YVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFIDSMSPKDK 488

Query:   347 CIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAAR 405
              I+F   K  AD L+  +  +  + E LHG+  QS RER L +F+ G+  ILIATD+A+R
Sbjct:   489 VIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDLASR 548

Query:   406 GLD 408
             GLD
Sbjct:   549 GLD 551


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 121/339 (35%), Positives = 181/339 (53%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +I+ ++ R G  K  PIQ       +QG D+IG A+TGTGKTL++ +P    I       
Sbjct:   211 EIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPVSR 270

Query:   169 GRGRNPLCLVLAPTRELAKQVEKEFHESA-PSLDTICVYGGTPISHQMRALDYGVDAVVG 227
              +   P  LVL PTRELA QVE E  +     L ++C+YGG     Q++ +  GVD ++ 
Sbjct:   271 KQRNGPGMLVLTPTRELALQVEAECSKYLYKGLKSVCIYGGGNRKGQIQDVTKGVDIIIA 330

Query:   228 TPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMP 287
             TPGR+ DL   N +NL  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M +A+ P
Sbjct:   331 TPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMTTASWP 390

Query:   288 PWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKC 347
                R L   YLK P+ V  VG  D    + +    I T+  EK S++ + +   +   K 
Sbjct:   391 DSTRRLAQSYLKQPMIV-YVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSLSPKDKV 449

Query:   348 IVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARG 406
             IVF   K  AD L+  ++ +    + LHGD  QS R++ L  FR GR  ILIATD+AARG
Sbjct:   450 IVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARG 509

Query:   407 LDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEML 445
             LD                 +++  ++ R G++  + E +
Sbjct:   510 LDVSDVTHVYNYNFPRNIEEYVH-RVGRTGRAGKIGESI 547


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 118/302 (39%), Positives = 165/302 (54%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++  + + G  K  PIQ       +QG D+IG A+TGTGKTL + +P    ++      
Sbjct:   252 EVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLK 311

Query:   169 GRGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVDAVVG 227
             G+   P  LVL PTRELA QVE E  + S   L ++CVYGG     Q+  L  GVD ++ 
Sbjct:   312 GQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIA 371

Query:   228 TPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMP 287
             TPGR+ DL   N +NL  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M SAT P
Sbjct:   372 TPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWP 431

Query:   288 PWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKC 347
               +  L   YLK P+ V  VG  D      +    I T+  EK S +   +   +   K 
Sbjct:   432 HSVHRLAQSYLKEPMIV-YVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKV 490

Query:   348 IVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARG 406
             IVF   K  AD L+  +   + + E LHGD  Q  RE+ L  F+ G+  ILIATD+A+RG
Sbjct:   491 IVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRG 550

Query:   407 LD 408
             LD
Sbjct:   551 LD 552


>UNIPROTKB|A4QVP2 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
            RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
            EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
            Uniprot:A4QVP2
        Length = 396

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 115/322 (35%), Positives = 182/322 (56%)

Query:    92 DSSKDEGLD-ISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKT 150
             +S+ DE +D   ++++  +++  +   G  +   IQ+  + P ++G D+I +A++GTGKT
Sbjct:    15 ESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKT 74

Query:   151 LAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGG 208
               F I +L KI   N K  +      L+LAPTRELA+Q++K        ++  C    GG
Sbjct:    75 ATFSISVLQKI-DTNVKQCQA-----LILAPTRELAQQIQKVVVAIGDFMNIECHACIGG 128

Query:   209 TPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEV 268
             T +   M+AL  G   VVGTPGRV D+I+R  L    ++  VLDEAD+MLS GF E +  
Sbjct:   129 TSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYD 188

Query:   269 ILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY 328
             I + LPQ+ Q ++ SATMP  +  +T K++++P+ + LV   D+   +GI  + IA    
Sbjct:   189 IFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LV-KKDELTLEGIKQFYIAVEKE 246

Query:   329 E-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTL 386
             E K   +  L  E     + ++F  T+R  D L   + A+ +    +HGD+ Q+QR+  +
Sbjct:   247 EWKLDTLSDLY-ETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIM 305

Query:   387 SAFRDGRFNILIATDVAARGLD 408
               FR G   +LIATD+ ARG+D
Sbjct:   306 KEFRSGSSRVLIATDLLARGID 327


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 115/307 (37%), Positives = 179/307 (58%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH- 168
             ++  + + G     PIQ+     AM GRDM+G + TG+GKTL++ +P    I+  N +  
Sbjct:   133 VLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA---IVHINAQPL 189

Query:   169 -GRGRNPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDA 224
                G  P+ LVLAPTRELA Q+++E   F +S+   +T CVYGG P   Q+R L  GV+ 
Sbjct:   190 LSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNT-CVYGGVPRGPQIRDLIRGVEI 248

Query:   225 VVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSA 284
              + TPGR++D++  N  NL  V ++VLDEAD+ML +GF   +  I++++  +RQ++MFSA
Sbjct:   249 CIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSA 308

Query:   285 TMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKG 344
             T P  ++ L   YL + + V  VG  D   +  I          +K + +G+ I E  K 
Sbjct:   309 TWPKEVQRLARDYLNDYIQVT-VGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKD 367

Query:   345 --GKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATD 401
                K ++FT TKR AD +   + +  +    +HGD +Q +R+  L+ FR G+  I++ATD
Sbjct:   368 RDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATD 427

Query:   402 VAARGLD 408
             VA+RG+D
Sbjct:   428 VASRGID 434


>TIGR_CMR|CPS_2658 [details] [associations]
            symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
            ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
            PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
            Uniprot:Q480Z7
        Length = 399

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 109/312 (34%), Positives = 179/312 (57%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             +     + + I+  +  +G  +  PIQK  +   + G D++G A+TGTGKT AF +PI++
Sbjct:     3 EFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIIN 62

Query:   160 KIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD--TICVYGGTPISHQMRA 217
             K  + N+   + ++   L+L PTRELA Q+ +   + +  L   T  VYGG     Q+ +
Sbjct:    63 KFGR-NKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDS 121

Query:   218 LDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR 277
             ++ G+D +V TPGR++DLI+   +N   ++  VLDEAD ML +GF +DV+ I+ +LP++R
Sbjct:   122 IELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             Q+++FSATMP  I  L    L +P  + +  ++        S+Y +  S   K  ++  +
Sbjct:   182 QTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKS--NKVPLLFNI 239

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             +T+ A   K ++F +TK  AD +  A+ K S     LH   +Q+ RE  L  F+D    +
Sbjct:   240 LTK-ADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRV 298

Query:   397 LIATDVAARGLD 408
             L+ATDVAARG+D
Sbjct:   299 LVATDVAARGID 310


>UNIPROTKB|F1NM08 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
            ArrayExpress:F1NM08 Uniprot:F1NM08
        Length = 595

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 115/308 (37%), Positives = 180/308 (58%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++  + R+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P    I+  N + 
Sbjct:    92 NVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA---IVHINHQP 148

Query:   169 --GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDA 224
                RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q+R L+ GV+ 
Sbjct:   149 FLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEI 208

Query:   225 VVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSA 284
              + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+SA
Sbjct:   209 CIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 268

Query:   285 TMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSIIGQLITE--H 341
             T P  +R L   +LK  + ++ +G  +      I  +  +   + EK   + +L+ E   
Sbjct:   269 TWPKEVRQLAEDFLKEYVHIN-IGALELSANHNILQIVDVCHDV-EKDDKLIRLMEEIMS 326

Query:   342 AKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIAT 400
              K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+ G+  ILIAT
Sbjct:   327 EKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIAT 386

Query:   401 DVAARGLD 408
             DVA+RGLD
Sbjct:   387 DVASRGLD 394


>UNIPROTKB|F1NXI3 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
            receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
            GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
            ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
            ArrayExpress:F1NXI3 Uniprot:F1NXI3
        Length = 603

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 115/308 (37%), Positives = 180/308 (58%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +++  + R+  ++   IQ      A+ G DM+G A+TG+GKTL++ +P    I+  N + 
Sbjct:   100 NVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA---IVHINHQP 156

Query:   169 --GRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDA 224
                RG  P+CLVLAPTRELA+QV++   E   A  L + C+YGG P   Q+R L+ GV+ 
Sbjct:   157 FLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEI 216

Query:   225 VVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSA 284
              + TPGR+ID ++    NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+SA
Sbjct:   217 CIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 276

Query:   285 TMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSIIGQLITE--H 341
             T P  +R L   +LK  + ++ +G  +      I  +  +   + EK   + +L+ E   
Sbjct:   277 TWPKEVRQLAEDFLKEYVHIN-IGALELSANHNILQIVDVCHDV-EKDDKLIRLMEEIMS 334

Query:   342 AKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIAT 400
              K  K IVF +TKR  D L   M +  +    +HGD SQ +R+  L+ F+ G+  ILIAT
Sbjct:   335 EKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIAT 394

Query:   401 DVAARGLD 408
             DVA+RGLD
Sbjct:   395 DVASRGLD 402


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 120/316 (37%), Positives = 181/316 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             + I+K+     ++ +L    I    PIQ      A+ G+DMIG+A TG+GKTLAF +P  
Sbjct:   113 VSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172

Query:   159 DKII-KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE-SAPS-LDTICVYGGTPISHQM 215
               I+ + N K+G G  P+ LVLAPTRELA+Q+ +E  + S  S +   C YGG P S Q+
Sbjct:   173 VHILAQPNLKYGDG--PIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQI 230

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
              AL  GV  ++  PGR+IDL+++N  NL  V ++VLDEAD+ML +GF   +  I++++  
Sbjct:   231 YALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRP 290

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKN-PLTVDLVGDSDQKLADGISLYSIATSMYEKPSII 334
             +RQ++M+SAT P  +++L     K  P+ V+ VG         I         +EK   +
Sbjct:   291 DRQTLMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTACRSIKQEIYLLEEHEKIGNL 349

Query:   335 GQLITEHAKGG-KCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDG 392
               L+    K   + IVF +TK++AD +  A+         +HGD  Q +R   L+ F+ G
Sbjct:   350 KSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTG 409

Query:   393 RFNILIATDVAARGLD 408
             +  I+IATDVA+RGLD
Sbjct:   410 KSPIMIATDVASRGLD 425


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 120/316 (37%), Positives = 181/316 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             + I+K+     ++ +L    I    PIQ      A+ G+DMIG+A TG+GKTLAF +P  
Sbjct:   113 VSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172

Query:   159 DKII-KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE-SAPS-LDTICVYGGTPISHQM 215
               I+ + N K+G G  P+ LVLAPTRELA+Q+ +E  + S  S +   C YGG P S Q+
Sbjct:   173 VHILAQPNLKYGDG--PIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQI 230

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
              AL  GV  ++  PGR+IDL+++N  NL  V ++VLDEAD+ML +GF   +  I++++  
Sbjct:   231 YALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRP 290

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKN-PLTVDLVGDSDQKLADGISLYSIATSMYEKPSII 334
             +RQ++M+SAT P  +++L     K  P+ V+ VG         I         +EK   +
Sbjct:   291 DRQTLMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTACRSIKQEIYLLEEHEKIGNL 349

Query:   335 GQLITEHAKGG-KCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDG 392
               L+    K   + IVF +TK++AD +  A+         +HGD  Q +R   L+ F+ G
Sbjct:   350 KSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTG 409

Query:   393 RFNILIATDVAARGLD 408
             +  I+IATDVA+RGLD
Sbjct:   410 KSPIMIATDVASRGLD 425


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 121/326 (37%), Positives = 187/326 (57%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             +++D+ + +   + R    K  P+Q+  +     GRD++  A+TG+GKT AF  PI+  I
Sbjct:   149 AEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGI 208

Query:   162 IK---FNEKHG-RGRNPLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQM 215
             +K        G RG  PL ++L+PTRELA Q+  E  + +    +  +  YGGTP++ Q+
Sbjct:   209 MKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQI 268

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL-- 273
             R L+ GVD +V TPGR+ DL++R  ++L  V+F+ LDEAD+ML +GF   +  I++++  
Sbjct:   269 RELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDM 328

Query:   274 --PQNRQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYE 329
               P  RQ+M+FSAT P  I+ L + +L N   L V  VG S   +   +    +  S  +
Sbjct:   329 PPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEF--VHDS--D 384

Query:   330 KPSIIGQLI---TEHAKGGK---CIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQR 382
             K S +  L+    E+   GK    +VF +TK+ AD L + +    +    +HGD SQ +R
Sbjct:   385 KRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQER 444

Query:   383 ERTLSAFRDGRFNILIATDVAARGLD 408
             E  L +F+ GR  IL+ATDVAARGLD
Sbjct:   445 EVALRSFKTGRTPILVATDVAARGLD 470


>ZFIN|ZDB-GENE-030131-925 [details] [associations]
            symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
            ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
        Length = 617

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 115/292 (39%), Positives = 172/292 (58%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK--FNEKHGRGRNPLCLVLAP 181
             PIQ      A+ G+DM+G A+TG+GKTL++ +P +  I    F E HG G  P+CLVLAP
Sbjct:   121 PIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLE-HGDG--PICLVLAP 177

Query:   182 TRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRN 239
             TRELA+QV++   E   A  + + C+YGG P   Q+R L+ GV+  + TPGR+ID ++  
Sbjct:   178 TRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAG 237

Query:   240 ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLK 299
               NL    ++VLDEAD+ML +GF   +  I++++  +RQ++M+SAT P  +R L   +LK
Sbjct:   238 KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLK 297

Query:   300 NPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDA 357
               + ++ VG         I       +  EK   + +L+ E    K  K I+F +TKR  
Sbjct:   298 EYIQIN-VGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRC 356

Query:   358 DRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             D L   M +  +    +HGD +Q +R+  L+ F+ G+  ILIATDVA+RGLD
Sbjct:   357 DDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLD 408


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 120/306 (39%), Positives = 170/306 (55%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP----ILDKIIKF 164
             +++  + + G  K  PIQ       +QG D+IG A+TGTGKTL++ +P    +  + + F
Sbjct:   251 EVMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQPVVF 310

Query:   165 NEKHGRGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVD 223
             + +  R   P  LVL PTRELA QVE E  + S   L ++CVYGG     Q++ L  GVD
Sbjct:   311 SLQRARN-GPGMLVLTPTRELALQVEAECSKYSYKGLKSVCVYGGGDRDGQIKDLLKGVD 369

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
              ++ TPGR+ DL   N + L  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M S
Sbjct:   370 IIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKILLDIRPDRQTVMTS 429

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAK 343
             AT P  +R L   YLK P+ V  VG  D      +    I T+  EK S I   I   + 
Sbjct:   430 ATWPYAVRRLAQSYLKEPMIV-YVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESMSP 488

Query:   344 GGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
               K I+F   K  AD L+  +  +  + E LHG+  Q  RER L  F+ G+  ILIATD+
Sbjct:   489 KDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILIATDL 548

Query:   403 AARGLD 408
             A+RGLD
Sbjct:   549 ASRGLD 554


>UNIPROTKB|Q485I3 [details] [associations]
            symbol:dbpA "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 110/314 (35%), Positives = 179/314 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L  S L + QD+V  L+  G  ++ PIQ   L   ++G+D+IG A+TG+GKT AFG+ +L
Sbjct:    10 LAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALL 69

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVY---GGTPISHQM 215
             +K+     K  R ++   +V+ PTRELA QV KE  + A  +  I +    GGTP   Q+
Sbjct:    70 NKL---EVKKFRIQS---MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQI 123

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
              +L++G   +VGTPGR+ + + +  L L  +  +VLDEAD+ML +GF   ++ I+ R P 
Sbjct:   124 GSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPL 183

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT P  I+S++   + +P+ V +    DQ        + +        ++  
Sbjct:   184 DRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQ-KFFKVGNDDDRLDALRL 242

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRF 394
              L+    +     +F  TK++  ++A A+    ++   LHGD+ Q  R++TL  F +   
Sbjct:   243 LLLGNQVES--TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSA 300

Query:   395 NILIATDVAARGLD 408
             +IL+ATDVAARGLD
Sbjct:   301 SILVATDVAARGLD 314


>UNIPROTKB|Q9KMW4 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 110/315 (34%), Positives = 180/315 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  + L +S  I+ A+  +G +   PIQ   +   + G+D++  A+TGTGKT  F +PIL
Sbjct:     1 MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQM 215
             + + K  +   R      L+L PTRELA Q++     +    P L +  V+GG  I+ QM
Sbjct:    61 ELLAKGPKV--RANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQM 117

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             + +  G D +V TPGR++DL  +NA+   +++ +VLDEAD+ML +GF  D+  IL+ LP+
Sbjct:   118 QRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPE 177

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLV-GDSDQKLADGISLYSIATSMYEKPSII 334
              RQ+++FSAT    IR L    + NP+ + +   +S  +  +   +Y     + +KP ++
Sbjct:   178 KRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQC-IYP--ADVKKKPDML 234

Query:   335 GQLITEHAKGGKCIVFTQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDGR 393
              +L+ E     + +VF +TK  A+RLA +   +      +HG+ SQ  R R L+ F+ G 
Sbjct:   235 VKLVKE-GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGE 293

Query:   394 FNILIATDVAARGLD 408
               IL+ATD+AARG+D
Sbjct:   294 VRILVATDIAARGID 308


>TIGR_CMR|CPS_1540 [details] [associations]
            symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 110/314 (35%), Positives = 179/314 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             L  S L + QD+V  L+  G  ++ PIQ   L   ++G+D+IG A+TG+GKT AFG+ +L
Sbjct:    10 LAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALL 69

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVY---GGTPISHQM 215
             +K+     K  R ++   +V+ PTRELA QV KE  + A  +  I +    GGTP   Q+
Sbjct:    70 NKL---EVKKFRIQS---MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQI 123

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
              +L++G   +VGTPGR+ + + +  L L  +  +VLDEAD+ML +GF   ++ I+ R P 
Sbjct:   124 GSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPL 183

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT P  I+S++   + +P+ V +    DQ        + +        ++  
Sbjct:   184 DRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQ-KFFKVGNDDDRLDALRL 242

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRF 394
              L+    +     +F  TK++  ++A A+    ++   LHGD+ Q  R++TL  F +   
Sbjct:   243 LLLGNQVES--TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSA 300

Query:   395 NILIATDVAARGLD 408
             +IL+ATDVAARGLD
Sbjct:   301 SILVATDVAARGLD 314


>TIGR_CMR|VC_A0204 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 110/315 (34%), Positives = 180/315 (57%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  + L +S  I+ A+  +G +   PIQ   +   + G+D++  A+TGTGKT  F +PIL
Sbjct:     1 MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQM 215
             + + K  +   R      L+L PTRELA Q++     +    P L +  V+GG  I+ QM
Sbjct:    61 ELLAKGPKV--RANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQM 117

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             + +  G D +V TPGR++DL  +NA+   +++ +VLDEAD+ML +GF  D+  IL+ LP+
Sbjct:   118 QRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPE 177

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLV-GDSDQKLADGISLYSIATSMYEKPSII 334
              RQ+++FSAT    IR L    + NP+ + +   +S  +  +   +Y     + +KP ++
Sbjct:   178 KRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQC-IYP--ADVKKKPDML 234

Query:   335 GQLITEHAKGGKCIVFTQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDGR 393
              +L+ E     + +VF +TK  A+RLA +   +      +HG+ SQ  R R L+ F+ G 
Sbjct:   235 VKLVKE-GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGE 293

Query:   394 FNILIATDVAARGLD 408
               IL+ATD+AARG+D
Sbjct:   294 VRILVATDIAARGID 308


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 120/326 (36%), Positives = 189/326 (57%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             +++D+ + +   + R    K  P+Q+  +   ++GRD++  A+TG+GKT AF  PI+  I
Sbjct:   162 AEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGI 221

Query:   162 IKFNE-KHGRGRN---PLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQM 215
             +K    +  RG     PL ++L+PTRELA Q+  E  + +    +  +  YGGTPI+ Q+
Sbjct:   222 MKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQL 281

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL-- 273
             R L+ GVD +V TPGR+ DL++R  +++  ++F+ LDEAD+ML +GF   +  I+E++  
Sbjct:   282 RELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDM 341

Query:   274 -PQN-RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYE 329
              P+  RQ+++FSAT P  I+ L   +L N   L V  VG S   +   +    +  S  +
Sbjct:   342 PPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEF--VLDS--D 397

Query:   330 KPSIIGQLI-TEHAKG--GK---CIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQR 382
             K S +  L+  +   G  GK    +VF +TKR AD L + +    +    +HGD +Q +R
Sbjct:   398 KRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQER 457

Query:   383 ERTLSAFRDGRFNILIATDVAARGLD 408
             E  L AF+ GR  IL+ATDVAARGLD
Sbjct:   458 EVALKAFKSGRTPILVATDVAARGLD 483


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 107/303 (35%), Positives = 170/303 (56%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH 168
             +I+ A++  G  K+ PIQ+  +    +G+D++  A+TGTGKT AF +PIL K+++ N   
Sbjct:    11 EILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMVE-NPSE 69

Query:   169 GRGRNPLCLVLAPTRELAKQVEK--EFHESAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
                 N   L+L PTRELA QV +  E +    +   + +YGG  +  Q + L  G D +V
Sbjct:    70 TLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIV 129

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATM 286
              TPGR+++ +    L+LS V F+VLDEAD+ML +GF+ D++ IL+ + + RQ+++FSAT 
Sbjct:   130 ATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQNLLFSATF 189

Query:   287 PPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGK 346
                ++ L N+ +  P  +    D     AD +S          K  ++ +LI +     +
Sbjct:   190 SSAVKKLANEMMIKPQVIS--ADKQNTTADTVSQVVYPVEQRRKRELLSELIGKK-NWQQ 246

Query:   347 CIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAAR 405
              +VFT T+  AD L   +       E +HG+ +Q  R R L  F  G+  +L+AT+VAAR
Sbjct:   247 VLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAAR 306

Query:   406 GLD 408
             GLD
Sbjct:   307 GLD 309


>WB|WBGene00002083 [details] [associations]
            symbol:inf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
            GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
            EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
            UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
            DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
            PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
            EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
            UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
            InParanoid:P27639 NextBio:890522 Uniprot:P27639
        Length = 402

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 113/333 (33%), Positives = 185/333 (55%)

Query:    82 SAVDDYVAYDDSSKDEGLD-ISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMI 140
             S+V D     + + D+ ++    +++ ++++  +   G  K   IQK  + P   G+D+I
Sbjct:    11 SSVVDADGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVI 70

Query:   141 GRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSL 200
              +A++GTGKT  F + IL +I    + H +      LV+APTRELA+Q++K        L
Sbjct:    71 AQAQSGTGKTATFSVSILQRI-DHEDPHVQA-----LVMAPTRELAQQIQKVMSALGEYL 124

Query:   201 DTI---CVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQM 257
             +     C+ GGT +    R L+ G+  VVGTPGRV D+I RNAL+ S ++  VLDEAD+M
Sbjct:   125 NVNILPCI-GGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEM 183

Query:   258 LSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADG 317
             LS GF + +  +   +PQ+ Q ++ SATMP  +  +TN++++NP+ + LV   D+   +G
Sbjct:   184 LSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRI-LV-KKDELTLEG 241

Query:   318 ISLYSIATSMYE-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHG 375
             I  + I     E K   +  L        + ++F  T+R  D L   M ++ +    LHG
Sbjct:   242 IRQFYINVQKDEWKFDCLCDLYNV-VNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHG 300

Query:   376 DISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             D+ Q++R+  +  FR G   +LI TD+ ARG+D
Sbjct:   301 DMDQAERDTIMREFRSGSSRVLITTDILARGID 333


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 114/313 (36%), Positives = 170/313 (54%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S   +   ++ A+      +   IQK  +   +   D++ RA+TGTGKT AF +PIL
Sbjct:     5 MTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPIL 64

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TICV-YGGTPISHQMR 216
              ++I         R    LVL PTRELA+QV K F       D TI + YGG     Q+ 
Sbjct:    65 QQLISVQPCKPELR---ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQIS 121

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD ++ TPGR++DL++  +++LS ++ +V DEAD+ML +GF E+++ I + LP+ 
Sbjct:   122 ELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKT 181

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             +Q+++FSAT    I  ++   L  P  V++  D   K AD +           K  +   
Sbjct:   182 KQTLLFSATFADDIYKMSKNILVEPKMVEI--DEKNKAADDVEQLVYGVDADRKRELTSF 239

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LI       + +VFT+TK+ AD LA  M K       +HGD SQ  RE+ L  F++G+  
Sbjct:   240 LIGSR-NWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298

Query:   396 ILIATDVAARGLD 408
              LIATDVAARG+D
Sbjct:   299 ALIATDVAARGID 311


>UNIPROTKB|Q4K4K3 [details] [associations]
            symbol:dbpA "ATP-independent RNA helicase DbpA"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
            ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
            KEGG:pfl:PFL_5772 PATRIC:19881049
            BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
        Length = 461

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 113/309 (36%), Positives = 180/309 (58%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L +S  ++A L   G +++ PIQ   L   ++G D+I +A+TG+GKT AFGI +L+ I  
Sbjct:    11 LPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPI-- 68

Query:   164 FNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVY---GGTPISHQMRALDY 220
              N ++   +    LV+ PTRELA QV KE    A + D I V    GG     Q+ +L++
Sbjct:    69 -NPRYFGCQ---ALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEH 124

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   +VGTPGR+   +++ +L L  +  +VLDEAD+ML +GF + +E I+E+ P  RQ++
Sbjct:   125 GAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTL 184

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSAT P  I+ L +K++++P TV      D    +    Y I+    E+ S + +++  
Sbjct:   185 LFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQ-RFYEISPE--ERMSAVTKVL-H 240

Query:   341 HAKGGKCIVFTQTKRDA-DRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             H +   C+ F  TK+   + + H  AK  +   LHGD+ Q  R++ L+ F +   ++L+A
Sbjct:   241 HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA 300

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   301 TDVAARGLD 309


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 114/313 (36%), Positives = 170/313 (54%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S   +   ++ A+      +   IQK  +   +   D++ RA+TGTGKT AF +PIL
Sbjct:     5 MTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPIL 64

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TICV-YGGTPISHQMR 216
              ++I         R    LVL PTRELA+QV K F       D TI + YGG     Q+ 
Sbjct:    65 QQLISVQPCKPELR---ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQIS 121

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD ++ TPGR++DL++  +++LS ++ +V DEAD+ML +GF E+++ I + LP+ 
Sbjct:   122 ELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKT 181

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             +Q+++FSAT    I  ++   L  P  V++  D   K AD +           K  +   
Sbjct:   182 KQTLLFSATFADDIYKMSKNILVEPKMVEI--DEKNKAADDVEQLVYGVDADRKRELTSF 239

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LI       + +VFT+TK+ AD LA  M K       +HGD SQ  RE+ L  F++G+  
Sbjct:   240 LIGSR-NWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298

Query:   396 ILIATDVAARGLD 408
              LIATDVAARG+D
Sbjct:   299 ALIATDVAARGID 311


>UNIPROTKB|Q81JK1 [details] [associations]
            symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 105/312 (33%), Positives = 180/312 (57%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S   +S+++  AL   G      +Q  V+  A+Q +D++ +++TG+GKT +FGIP+ + +
Sbjct:     7 SNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE-M 65

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALD 219
             +++ E       P  LVL PTRELA QV+++         +    +YG +P + Q   L 
Sbjct:    66 VEWEEN-----KPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK 120

Query:   220 YGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
                  VVGTPGRV+D I++  L+L  ++++V+DEAD+ML++GF + VE I++ LP  R +
Sbjct:   121 QKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT 180

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDL--VGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             M+FSAT+P  +  L+  Y+  P  +++   G +  K+    +L+ +     EK S++   
Sbjct:   181 MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEH--TLFEVREE--EKLSLLKD- 235

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             +T       CI+F +T+ + D +   + + +Y C+ +HG + Q  R   +  FR G+F  
Sbjct:   236 VTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRY 295

Query:   397 LIATDVAARGLD 408
             L+ATDVAARG+D
Sbjct:   296 LVATDVAARGID 307


>TIGR_CMR|BA_5703 [details] [associations]
            symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 105/312 (33%), Positives = 180/312 (57%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S   +S+++  AL   G      +Q  V+  A+Q +D++ +++TG+GKT +FGIP+ + +
Sbjct:     7 SNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE-M 65

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALD 219
             +++ E       P  LVL PTRELA QV+++         +    +YG +P + Q   L 
Sbjct:    66 VEWEEN-----KPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK 120

Query:   220 YGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
                  VVGTPGRV+D I++  L+L  ++++V+DEAD+ML++GF + VE I++ LP  R +
Sbjct:   121 QKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT 180

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDL--VGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             M+FSAT+P  +  L+  Y+  P  +++   G +  K+    +L+ +     EK S++   
Sbjct:   181 MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEH--TLFEVREE--EKLSLLKD- 235

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             +T       CI+F +T+ + D +   + + +Y C+ +HG + Q  R   +  FR G+F  
Sbjct:   236 VTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRY 295

Query:   397 LIATDVAARGLD 408
             L+ATDVAARG+D
Sbjct:   296 LVATDVAARGID 307


>FB|FBgn0036104 [details] [associations]
            symbol:CG6418 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
            GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
            UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
            STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
            KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
            InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
            NextBio:812543 Uniprot:Q9VTC1
        Length = 791

 Score = 481 (174.4 bits), Expect = 3.3e-45, P = 3.3e-45
 Identities = 112/306 (36%), Positives = 177/306 (57%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE- 166
             + ++ A+ +   ++  PIQ   +  A+ GRD+IG A+TG+GKT AF  P+L  ++   + 
Sbjct:   278 EQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQL 337

Query:   167 KHGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGVDA 224
             K G G  P+ L+LAPTREL+ Q+  E  +     +L+ +C YGG     Q +AL+ G + 
Sbjct:   338 KPGDG--PIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEI 395

Query:   225 VVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSA 284
             +V TPGR+ID++K  A NL  V F+VLDEAD+M  +GF   V  I   +  +RQ +MFSA
Sbjct:   396 IVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSA 455

Query:   285 TMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGI-SLYSIATSMYEKPSIIGQLITEHAK 343
             T    I  L    L +P+ + + GD ++   D   S+Y     + +   ++  L+ +   
Sbjct:   456 TFKKRIERLARDVLSDPVRI-VQGDLNEANQDITQSVYVFPNPLQKWNWLLCHLV-KFLS 513

Query:   344 GGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
              G  ++F   K DA+ +++  + K YNC  LHGD+ Q+ R + ++ F+    +IL+ATDV
Sbjct:   514 EGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDV 573

Query:   403 AARGLD 408
             AARGLD
Sbjct:   574 AARGLD 579


>UNIPROTKB|Q9KS53 [details] [associations]
            symbol:VC1407 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
            RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
            GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
            ProtClustDB:CLSK874358 Uniprot:Q9KS53
        Length = 397

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 116/350 (33%), Positives = 187/350 (53%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S+L +S  +V  +A+ G  K   IQ   +   +QGRD+I  A+TGTGKT +F +PIL
Sbjct:     1 MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQV-EK-EFHESAPSLDTICVYGGTPISHQMR 216
             +K+ +   +  R +    L+L PTRELA QV EK E +     L ++ V+GG     Q +
Sbjct:    61 EKLRQGQTQ--RKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQ 118

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD +V TPGR++DL  + A+   E++ VVLDEAD+ML +GF E +  I++ LP  
Sbjct:   119 RLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSE 178

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
              Q ++FSAT+   +R L    +++P  + +  +   K    IS + I      K +++  
Sbjct:   179 VQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASK--SNISQWLITVDKDTKSALLSH 236

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LI E  +  + ++F +TK  A +L   + K   + E  H   SQ+ R + L  F+ G+  
Sbjct:   237 LINEQ-QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIK 295

Query:   396 ILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEML 445
              L+AT VAARG+D                 +++  +I R G++  + E +
Sbjct:   296 YLVATGVAARGIDIDQLSRVVNYDLPFPADEYVH-RIGRTGRAEAVGEAI 344


>TIGR_CMR|VC_1407 [details] [associations]
            symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
            RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
            GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
            ProtClustDB:CLSK874358 Uniprot:Q9KS53
        Length = 397

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 116/350 (33%), Positives = 187/350 (53%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S+L +S  +V  +A+ G  K   IQ   +   +QGRD+I  A+TGTGKT +F +PIL
Sbjct:     1 MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQV-EK-EFHESAPSLDTICVYGGTPISHQMR 216
             +K+ +   +  R +    L+L PTRELA QV EK E +     L ++ V+GG     Q +
Sbjct:    61 EKLRQGQTQ--RKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQ 118

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD +V TPGR++DL  + A+   E++ VVLDEAD+ML +GF E +  I++ LP  
Sbjct:   119 RLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSE 178

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
              Q ++FSAT+   +R L    +++P  + +  +   K    IS + I      K +++  
Sbjct:   179 VQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASK--SNISQWLITVDKDTKSALLSH 236

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LI E  +  + ++F +TK  A +L   + K   + E  H   SQ+ R + L  F+ G+  
Sbjct:   237 LINEQ-QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIK 295

Query:   396 ILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEML 445
              L+AT VAARG+D                 +++  +I R G++  + E +
Sbjct:   296 YLVATGVAARGIDIDQLSRVVNYDLPFPADEYVH-RIGRTGRAEAVGEAI 344


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 113/299 (37%), Positives = 172/299 (57%)

Query:   118 GISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH--GRGRNPL 175
             G  K   IQ      A+ GRDM+G A TG+GKTL++ +P    I+  N +     G  P+
Sbjct:   132 GFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLP---GIVHINAQPLLAPGDGPI 188

Query:   176 CLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRV 232
              LVLAPTRELA Q++ E   F  S+   +T CVYGG P S Q+R L  G + V+ TPGR+
Sbjct:   189 VLVLAPTRELAVQIQTECSKFGHSSRIRNT-CVYGGVPKSQQIRDLSRGSEIVIATPGRL 247

Query:   233 IDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRS 292
             ID+++    NL  V ++VLDEAD+ML +GF   +  I++++  +RQ++M+SAT P  ++ 
Sbjct:   248 IDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQ 307

Query:   293 LTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGG--KCIVF 350
             L   YL +P+ V  VG  +   +  I+      S +EK   + + +   ++    K ++F
Sbjct:   308 LAADYLNDPIQVQ-VGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIF 366

Query:   351 TQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               TKR  D +   + +  +    +HGD  Q +R+  L  FR+GR  I++ATDVAARG+D
Sbjct:   367 ASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGID 425


>UNIPROTKB|Q9KLH6 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
            family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 117/368 (31%), Positives = 195/368 (52%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S+L +   ++  L+  GI+   PIQ+  +   +QG+D++  A+TGTGKT AFG+P++
Sbjct:     6 ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query:   159 DKIIKFN-EKHGRGRNPLCLVLAPTRELAKQV--EKEFHESAPSLDTICVYGGTPISHQM 215
              + I+   ++    +    LVL PTRELA+QV    + +     L  + VYGGT +  Q+
Sbjct:    66 QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
               L  GVD ++ TPGR++D     +L L +V+ +VLDEAD+ML +GF  D++ +L RL  
Sbjct:   126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
              RQ++ FSAT    I+++  + +++P+ V +   +    A+ +           K  ++ 
Sbjct:   186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNST--AETVQQMVYPVDKKRKRELLS 243

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRF 394
              LI       + +VFT+T++ +D LA  +         ++GD SQ  R++ L  F+ G+ 
Sbjct:   244 YLIGSK-NWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKV 302

Query:   395 NILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEMLDADLLSSQG 454
               LIATDVAARGLD                  ++  +I R G++ +    L   LLS   
Sbjct:   303 RALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVH-RIGRTGRAGLAG--LAVSLLSHDE 359

Query:   455 SP-LKEVE 461
              P L+ +E
Sbjct:   360 QPQLEAIE 367


>TIGR_CMR|VC_A0768 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 117/368 (31%), Positives = 195/368 (52%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S+L +   ++  L+  GI+   PIQ+  +   +QG+D++  A+TGTGKT AFG+P++
Sbjct:     6 ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query:   159 DKIIKFN-EKHGRGRNPLCLVLAPTRELAKQV--EKEFHESAPSLDTICVYGGTPISHQM 215
              + I+   ++    +    LVL PTRELA+QV    + +     L  + VYGGT +  Q+
Sbjct:    66 QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
               L  GVD ++ TPGR++D     +L L +V+ +VLDEAD+ML +GF  D++ +L RL  
Sbjct:   126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
              RQ++ FSAT    I+++  + +++P+ V +   +    A+ +           K  ++ 
Sbjct:   186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNST--AETVQQMVYPVDKKRKRELLS 243

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRF 394
              LI       + +VFT+T++ +D LA  +         ++GD SQ  R++ L  F+ G+ 
Sbjct:   244 YLIGSK-NWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKV 302

Query:   395 NILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGKSRVLSEMLDADLLSSQG 454
               LIATDVAARGLD                  ++  +I R G++ +    L   LLS   
Sbjct:   303 RALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVH-RIGRTGRAGLAG--LAVSLLSHDE 359

Query:   455 SP-LKEVE 461
              P L+ +E
Sbjct:   360 QPQLEAIE 367


>TIGR_CMR|VC_2564 [details] [associations]
            symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
            OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
            DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
            Uniprot:Q9KP15
        Length = 460

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 110/309 (35%), Positives = 176/309 (56%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L++  +++A L   G + + PIQ   L   ++G+D+IG+ +TG+GKT AFG+ +L  +  
Sbjct:     9 LNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLSNL-- 66

Query:   164 FNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICVY---GGTPISHQMRALDY 220
              N K  R +    LVL PTRELA QV  +      ++  I V    GG P+  Q+ +L++
Sbjct:    67 -NVKRFRVQ---ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEH 122

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   +VGTPGR++D + ++ ++LSE+  +VLDEAD+ML +GF E +E I+   P  RQ++
Sbjct:   123 GAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTL 182

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSAT P  I  +     +N L + +    D         Y +  S     ++   L+  
Sbjct:   183 LFSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQY-FYKVEGSAARDEALETLLL-- 239

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
             H +    +VF  TKR+   +A A+ +S ++   LHGD+ Q +R++ L  F +   +IL+A
Sbjct:   240 HHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVA 299

Query:   400 TDVAARGLD 408
             TDVAARGLD
Sbjct:   300 TDVAARGLD 308


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 111/282 (39%), Positives = 167/282 (59%)

Query:   133 AMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEK- 191
             AM GRD+I  A+TG+GKTLAF +P L  I K   +  RG  P  LVL PTRELA+QV++ 
Sbjct:   163 AMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQ-RGEGPAVLVLLPTRELAQQVQEV 221

Query:   192 --EFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFV 249
               +F  S   L   C++GG     Q R L+ GVD VV TPGR++D +     N+ +  ++
Sbjct:   222 SIDFCHSL-GLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYL 280

Query:   250 VLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGD 309
             VLDEAD+ML +GF   ++ I+ ++  +RQ++MFSAT P  +R+L + + K+   ++ VG 
Sbjct:   281 VLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLN-VGS 339

Query:   310 SDQKLADGISLYSIATSMYEKPSIIGQLITE--HAKGGKCIVFTQTKRDADRLAHAMAKS 367
              +      I+        + K + + +L+    + K  K I+F +TKR AD L  AM + 
Sbjct:   340 LELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRD 399

Query:   368 -YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
              +    +HGD +Q +R+  L  F+ G+  I++ATDVAARGLD
Sbjct:   400 GWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLD 441


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 475 (172.3 bits), Expect = 7.7e-45, P = 7.7e-45
 Identities = 115/302 (38%), Positives = 165/302 (54%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHG 169
             I+  + R G  K  PIQ       + G D+IG A+TGTGKTLA+ +P    +        
Sbjct:   289 IMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHMDGQPMPRD 348

Query:   170 RGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVDAVVGT 228
             +   P  LVL PTRELA Q+E E ++ S     +IC+YGG   + Q++ +  GVD V+ T
Sbjct:   349 KRNGPGMLVLTPTRELALQIEAECNKYSYKGFKSICIYGGGDRNAQIKVVTSGVDIVIAT 408

Query:   229 PGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDV-EVILERLPQNRQSMMFSATMP 287
             PGR+ DL     +NL  + ++VLDEAD+ML +GF   + ++IL+  P +RQ++M SAT P
Sbjct:   409 PGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRP-DRQTVMTSATWP 467

Query:   288 PWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKC 347
             P +R L   YLK+P+ V  VG  D    + +    +     EK   +   I       K 
Sbjct:   468 PGVRRLAKSYLKDPMMV-YVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRMEPLDKV 526

Query:   348 IVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARG 406
             ++F   K  AD L+  +  +    + LHGD  Q  RE  L  F+DGR  IL+ATD+A+RG
Sbjct:   527 LIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRILVATDLASRG 586

Query:   407 LD 408
             LD
Sbjct:   587 LD 588


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 474 (171.9 bits), Expect = 7.8e-45, P = 7.8e-45
 Identities = 111/304 (36%), Positives = 172/304 (56%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP-ILDKIIKFNEK 167
             D++  + + G SK  PIQ       +QG DMIG A+TGTGKTLAF +P ++    +   +
Sbjct:   293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPR 352

Query:   168 HGRGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
               RG   + LVLAPTRELA Q+E E  + S   +  +CVYGG   + Q+  L+ G + ++
Sbjct:   353 GTRGGANV-LVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIII 411

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATM 286
              TPGR+ DLI  N +++S + ++VLDEAD+ML +GF   +  ++  +  +RQ++M SAT 
Sbjct:   412 CTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATW 471

Query:   287 PPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIS-LYSIATSMYEKPSIIGQLITEHAKGG 345
             PP +R L   Y+KNP+ V  VG  D      +  +  +     +K + I   +   +   
Sbjct:   472 PPGVRRLAQSYMKNPIQV-CVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD 530

Query:   346 KCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAA 404
             K I+F   K  AD L+  +    +  + +HG+  Q  RE+ ++  + G   IL+ATDVA+
Sbjct:   531 KIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVAS 590

Query:   405 RGLD 408
             RGLD
Sbjct:   591 RGLD 594


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 117/303 (38%), Positives = 165/303 (54%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP-ILDKIIKFNEK 167
             DI+A + + G  K  PIQ       +QG D+IG A+TGTGKTLA+ +P  +    +   K
Sbjct:   250 DIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPK 309

Query:   168 HGRGRNPLCLVLAPTRELAKQVEKE-FHESAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
               RG  P  LVLAPTRELA QVE E    +     +IC+YGG     Q+  +  GVD V+
Sbjct:   310 DKRG-GPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVI 368

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATM 286
              TPGR+ DL   N +NL  + ++  +EAD+ML +GF   +  IL  +  +RQ++M SAT 
Sbjct:   369 ATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQIMKILIDVRPDRQTVMMSATW 427

Query:   287 PPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGK 346
             P  +R L   YL+NP+ V  VG  D    + +    I  +  EK + +   I       K
Sbjct:   428 PDGVRRLAKSYLRNPMIV-YVGTLDLAAVNTVEQKVIVINEEEKKAFMENFIDSMKPKDK 486

Query:   347 CIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAAR 405
              I+F   K  AD +A  +  +    + LHGD  Q  RE+ L  F+ G+  IL+ATD+A+R
Sbjct:   487 AIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASR 546

Query:   406 GLD 408
             GLD
Sbjct:   547 GLD 549


>TIGR_CMR|GSU_0189 [details] [associations]
            symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
            ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
            PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
            Uniprot:Q74GQ7
        Length = 460

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 115/317 (36%), Positives = 180/317 (56%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S L +   ++  LA  G +++ PIQ   L   + G+D+I RA+TG+GKT AFGI +L ++
Sbjct:     7 SSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRL 66

Query:   162 IKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTI---CVYGGTPISHQMRAL 218
                + +         LVL PTRELA QV KE    A   D I    + GG P   Q+ +L
Sbjct:    67 DALSFR------VQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSL 120

Query:   219 DYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQ 278
             ++G   V+GTPGR++D ++R +L+LS ++ +VLDEAD+ML +GF +D+  ++   P  RQ
Sbjct:   121 EHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQ 180

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +++FSAT P  I +++    + P+ V +    D+   +G    +I    YE  S  GQ I
Sbjct:   181 TLLFSATYPDSIAAMSAGVQREPVEVSV----DEVHGEG----AIEQVFYEVDS--GQRI 230

Query:   339 TE------HAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRD 391
                     H +    ++F  TK +   +A+A+A + Y    +HGD+ Q +R+R L  F +
Sbjct:   231 EAVERILGHYRPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFAN 290

Query:   392 GRFNILIATDVAARGLD 408
                ++L+ATDVAARGLD
Sbjct:   291 RSASVLVATDVAARGLD 307


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 124/307 (40%), Positives = 183/307 (59%)

Query:   120 SKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL-DKIIK----FNEKHGRGRN- 173
             +K  P+QK  +     GRD++  A+TG+GKT  F  P+L +  +K      E +G   + 
Sbjct:   207 TKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSH 266

Query:   174 ---PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YGGTPISHQMRALDYGVDAVVGT 228
                P  LV+APTREL  Q+ +E  + S  S    CV YGG  I  QMR +D G D +V T
Sbjct:   267 KVYPTILVMAPTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVAT 326

Query:   229 PGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LP--QNRQSMMFSA 284
             PGR+ DL+ R  ++L+ ++++VLDEAD+ML +GF   +  I+E   +P  ++RQ++MFSA
Sbjct:   327 PGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSA 386

Query:   285 TMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHA 342
             T P  I+ L   +LK+   L+V  VG + + +   I LY       EK S+I  L++ + 
Sbjct:   387 TFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKI-LY---VEDDEKKSVILDLLSAN- 441

Query:   343 KGGKCIVFTQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATD 401
             + G  IVFT+TKR AD LA +   + +    +HGD SQ +RE+ L+AF++G   IL+AT 
Sbjct:   442 ENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATA 501

Query:   402 VAARGLD 408
             VAARGLD
Sbjct:   502 VAARGLD 508


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 116/305 (38%), Positives = 175/305 (57%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE---------KHGRGRN- 173
             P+QK  +   M GRD++  A+TG+GKT  F  PIL +  +            + GR R  
Sbjct:   211 PVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKA 270

Query:   174 -PLCLVLAPTRELAKQVEKEFHESA-PSLDTICV-YGGTPISHQMRALDYGVDAVVGTPG 230
              P  L+LAPTREL  Q+  E  + A  S    CV YGG  I  Q+R ++ G D +V TPG
Sbjct:   271 YPTSLILAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPG 330

Query:   231 RVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LPQ--NRQSMMFSATM 286
             R++DLI+R  ++L  +++++LDEAD+ML +GF   +  I+E   +P   +RQ++MFSAT 
Sbjct:   331 RLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATF 390

Query:   287 PPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKG 344
             P  I+ L   +LK+   L+V  VG + + +   +  Y      ++K S++  ++  H   
Sbjct:   391 PRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVE-Y---VEDHDKRSVLLDILHTHGTT 446

Query:   345 GKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVA 403
             G  ++F +TKR AD L+  +    +    +HGD +Q +RER L  FR GR+ IL+AT VA
Sbjct:   447 GLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVA 506

Query:   404 ARGLD 408
             ARGLD
Sbjct:   507 ARGLD 511


>UNIPROTKB|F1NJ40 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
        Length = 946

 Score = 466 (169.1 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
 Identities = 112/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  AM GRDMIG A+TG+GKT AF  P+
Sbjct:   254 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPM 313

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   314 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQA 372

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   373 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRP 432

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   433 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEIFPSGPSKWNWLT 491

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   492 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGI 551

Query:   395 NILIATDVAARGLD 408
              IL+ATDVAARGLD
Sbjct:   552 PILVATDVAARGLD 565

 Score = 37 (18.1 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
 Identities = 11/56 (19%), Positives = 28/56 (50%)

Query:    42 PVIPRHDDIIKSRFSAGTREFHAISRPLDFKSSIAWQHAQSAVDDYVAYDDSSKDE 97
             P IP  +   + +F++ + +  +   PL+   + + ++ Q+A  D    +D  K++
Sbjct:    89 PYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAESVENDQAA-RDMKRLEDKDKEK 143


>TAIR|locus:2037416 [details] [associations]
            symbol:RCF1 "regulator of CBF gene expression 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
            RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
            ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
            EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
            KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
            TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
            ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
            Uniprot:Q8H0U8
        Length = 1166

 Score = 478 (173.3 bits), Expect = 2.6e-44, P = 2.6e-44
 Identities = 115/309 (37%), Positives = 173/309 (55%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             ++  I+  + +    K  PIQ   L   M GRD IG A+TG+GKTL F +P+L + IK  
Sbjct:   536 LTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML-RHIKDQ 594

Query:   166 EKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTICV--YGGTPISHQMRALDYGVD 223
                  G  P+ LV+APTREL +Q+  +  + +  L   CV  YGG+ ++ Q+  L  G +
Sbjct:   595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654

Query:   224 AVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
              VV TPGR+ID++  ++    NL  V F+V+DEAD+M  +GF   +  I++ +   RQ++
Sbjct:   655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSAT P  + +L  K L  P+ + + G S     D   L  +         ++ +L+ E
Sbjct:   715 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVN-KDITQLVEVRPESDRFLRLL-ELLGE 772

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
              ++ GK +VF Q++   D L   M KS Y C  LHG   Q+ RE T+S F++   N+LIA
Sbjct:   773 WSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIA 832

Query:   400 TDVAARGLD 408
             T VAARGLD
Sbjct:   833 TSVAARGLD 841


>UNIPROTKB|Q9KV52 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 109/308 (35%), Positives = 168/308 (54%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             +   ++  L ++G     PIQ   L   + G+D+ G+A+TGTGKTLAF     + ++   
Sbjct:    16 LQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTP 75

Query:   166 EKHGRGRN-PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGV 222
                GR    P  +++APTRELA Q+  +     ++  L     YGG     Q+  L  GV
Sbjct:    76 AAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGV 135

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ--NRQSM 280
             D ++GT GR+ID  K+   NL+ +Q VVLDEAD+M  +GF +D+  +  R+P+  +R +M
Sbjct:   136 DILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNM 195

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSAT+   ++ L  +++ NP  V  V + +QK    I       S   K +++  LI E
Sbjct:   196 LFSATLSYRVQELAFEHMNNPEHV--VVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEE 253

Query:   341 HAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
                  + I+F  TK   +++ AH  A ++    L GD+ Q +RER L  F  G  +IL+A
Sbjct:   254 EWPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVA 312

Query:   400 TDVAARGL 407
             TDVAARGL
Sbjct:   313 TDVAARGL 320


>TIGR_CMR|VC_0305 [details] [associations]
            symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 109/308 (35%), Positives = 168/308 (54%)

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 165
             +   ++  L ++G     PIQ   L   + G+D+ G+A+TGTGKTLAF     + ++   
Sbjct:    16 LQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTP 75

Query:   166 EKHGRGRN-PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGV 222
                GR    P  +++APTRELA Q+  +     ++  L     YGG     Q+  L  GV
Sbjct:    76 AAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGV 135

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ--NRQSM 280
             D ++GT GR+ID  K+   NL+ +Q VVLDEAD+M  +GF +D+  +  R+P+  +R +M
Sbjct:   136 DILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNM 195

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITE 340
             +FSAT+   ++ L  +++ NP  V  V + +QK    I       S   K +++  LI E
Sbjct:   196 LFSATLSYRVQELAFEHMNNPEHV--VVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEE 253

Query:   341 HAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIA 399
                  + I+F  TK   +++ AH  A ++    L GD+ Q +RER L  F  G  +IL+A
Sbjct:   254 EWPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVA 312

Query:   400 TDVAARGL 407
             TDVAARGL
Sbjct:   313 TDVAARGL 320


>UNIPROTKB|F1NQ09 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
            IPI:IPI00819782 ProteinModelPortal:F1NQ09
            Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
        Length = 451

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 119/306 (38%), Positives = 171/306 (55%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP-ILDKIIKFNEK 167
             DI+A + + G  K  PIQ       +QG D+IG A+TGTGKTLA+ +P  +    +   K
Sbjct:    63 DIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPK 122

Query:   168 HGRGRNPLCLVLAPTRELAKQVEKE-FHESAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
               RG  P  LVLAPTRELA QVE E    +     +IC+YGG     Q+  +  GVD V+
Sbjct:   123 DKRG-GPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVI 181

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATM 286
              TPGR+ DL   N +NL  + ++VLDEAD+ML +GF   +  IL  +  +RQ++M SAT 
Sbjct:   182 ATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMMSATW 241

Query:   287 PPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKG-- 344
             P  +R L   YL+NP+ V  VG  D  ++ G+ L  +    ++K     + +  +A+   
Sbjct:   242 PDGVRRLAKSYLRNPMIV-YVGTLDLAVS-GVVLKYL---QFDKDIFTWKYMQVNAQSFC 296

Query:   345 -GKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
                 +VF Q    AD +A  +  +    + LHGD  Q  RE+ L  F+ G+  IL+ATD+
Sbjct:   297 TDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDL 356

Query:   403 AARGLD 408
             A+RGLD
Sbjct:   357 ASRGLD 362


>UNIPROTKB|Q8EJQ5 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 111/310 (35%), Positives = 172/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L +  ++  ALA  G     PIQ   L   +Q +D+ G+A+TGTGKT+AF +   + ++ 
Sbjct:    14 LPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLS 73

Query:   164 FNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
              +   GR  N P  +++APTRELA Q+ K+    A    L    VYGG     Q + LD 
Sbjct:    74 SSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQ 133

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ--NRQ 278
             GVD ++GT GR+ID +++  +NL+ +Q VVLDEAD+M  +GF +D+  +  R+P    R 
Sbjct:   134 GVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMPNADQRL 193

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +M+FSAT+   ++ L   ++ +P+ V++    ++K +  I       S  +K  ++  LI
Sbjct:   194 NMLFSATLSMKVQELAYDHMNDPVKVEIA--PEEKTSKNIKEEIFYPSQEDKMRLLLTLI 251

Query:   339 TEHAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
              E     K IVF+ TK   + L +      +    L GD+ Q +R R L  F  G+ +IL
Sbjct:   252 EEDWPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDIL 310

Query:   398 IATDVAARGL 407
             +ATDVAARGL
Sbjct:   311 VATDVAARGL 320


>TIGR_CMR|SO_0407 [details] [associations]
            symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 111/310 (35%), Positives = 172/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             L +  ++  ALA  G     PIQ   L   +Q +D+ G+A+TGTGKT+AF +   + ++ 
Sbjct:    14 LPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLS 73

Query:   164 FNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHESAPS--LDTICVYGGTPISHQMRALDY 220
              +   GR  N P  +++APTRELA Q+ K+    A    L    VYGG     Q + LD 
Sbjct:    74 SSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQ 133

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ--NRQ 278
             GVD ++GT GR+ID +++  +NL+ +Q VVLDEAD+M  +GF +D+  +  R+P    R 
Sbjct:   134 GVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMPNADQRL 193

Query:   279 SMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLI 338
             +M+FSAT+   ++ L   ++ +P+ V++    ++K +  I       S  +K  ++  LI
Sbjct:   194 NMLFSATLSMKVQELAYDHMNDPVKVEIA--PEEKTSKNIKEEIFYPSQEDKMRLLLTLI 251

Query:   339 TEHAKGGKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
              E     K IVF+ TK   + L +      +    L GD+ Q +R R L  F  G+ +IL
Sbjct:   252 EEDWPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDIL 310

Query:   398 IATDVAARGL 407
             +ATDVAARGL
Sbjct:   311 VATDVAARGL 320


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 112/346 (32%), Positives = 194/346 (56%)

Query:    81 QSAVDDYVAYDDSSKD-EGLD-------ISKLDISQDIVAALARRGISKLFPIQKAVLEP 132
             QS ++ +  YD+ + +  GLD         + + +Q +   +++ G SKL P+QK  +  
Sbjct:   142 QSGIN-FDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPV 200

Query:   133 AMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN---EKHGRGRNPLCLVLAPTRELAKQV 189
                GRD++  A+TG+GKT AF +PI+D+++K         + + P C+++APTREL  Q+
Sbjct:   201 IQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQI 260

Query:   190 EKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQ 247
               E  +      +  + +YGGT   H +R +  G + +  TPGR++D+I++  ++L EV+
Sbjct:   261 FLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVK 320

Query:   248 FVVLDEADQMLSVGFAEDVEVILE--RLPQN--RQSMMFSATMPPWIRSLTNKYLKNPLT 303
             ++VLDEAD+ML +GF  D++ ++    +P    RQ++MFSAT P  ++ L  ++LK    
Sbjct:   321 YLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYI 380

Query:   304 VDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHA 363
               ++G++    +D          + ++  +I   I +   G + +VF  TK+ AD LA  
Sbjct:   381 FLVIGNTCGACSDVQQNILQVPRLSKRDKLIE--ILQSTGGERTMVFVDTKKKADYLAAF 438

Query:   364 MAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             + + +     +HGD  Q +RE  L  FR G+  IL+AT VA+RGLD
Sbjct:   439 LCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLD 484


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 112/346 (32%), Positives = 194/346 (56%)

Query:    81 QSAVDDYVAYDDSSKD-EGLD-------ISKLDISQDIVAALARRGISKLFPIQKAVLEP 132
             QS ++ +  YD+ + +  GLD         + + +Q +   +++ G SKL P+QK  +  
Sbjct:   142 QSGIN-FDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPV 200

Query:   133 AMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN---EKHGRGRNPLCLVLAPTRELAKQV 189
                GRD++  A+TG+GKT AF +PI+D+++K         + + P C+++APTREL  Q+
Sbjct:   201 IQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQI 260

Query:   190 EKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQ 247
               E  +      +  + +YGGT   H +R +  G + +  TPGR++D+I++  ++L EV+
Sbjct:   261 FLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVK 320

Query:   248 FVVLDEADQMLSVGFAEDVEVILE--RLPQN--RQSMMFSATMPPWIRSLTNKYLKNPLT 303
             ++VLDEAD+ML +GF  D++ ++    +P    RQ++MFSAT P  ++ L  ++LK    
Sbjct:   321 YLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYI 380

Query:   304 VDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHA 363
               ++G++    +D          + ++  +I   I +   G + +VF  TK+ AD LA  
Sbjct:   381 FLVIGNTCGACSDVQQNILQVPRLSKRDKLIE--ILQSTGGERTMVFVDTKKKADYLAAF 438

Query:   364 MAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             + + +     +HGD  Q +RE  L  FR G+  IL+AT VA+RGLD
Sbjct:   439 LCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLD 484


>UNIPROTKB|Q86TM3 [details] [associations]
            symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
            EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
            UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
            SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
            PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
            KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
            HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
            PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
            EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
            Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
            GermOnline:ENSG00000184735 Uniprot:Q86TM3
        Length = 631

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 115/306 (37%), Positives = 174/306 (56%)

Query:   109 DIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIP--I-LD-KIIKF 164
             D++ ++ R GI K  PIQ       +QG D+I  A+TGTGKTL++ +P  I LD + I  
Sbjct:   232 DLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISR 291

Query:   165 NEKHGRGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVD 223
              +++G G     LVL PTRELA  VE E  + S   L +IC+YGG   + Q+  +  GVD
Sbjct:   292 EQRNGPGM----LVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVD 347

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
              ++ TPGR+ DL   N++NL  + ++V+DEAD+ML + F   +  IL  +  +RQ++M S
Sbjct:   348 IIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTS 407

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAK 343
             AT P  +R L   YLK+P+ V  VG+ +    + +    I T+  EK ++  + +   + 
Sbjct:   408 ATWPDTVRQLALSYLKDPMIV-YVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSP 466

Query:   344 GGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
               K I+F   K  AD L+     +  + E LHG+  QS +ER +  F+ G   ILI TD+
Sbjct:   467 NDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDI 526

Query:   403 AARGLD 408
              +RGLD
Sbjct:   527 VSRGLD 532


>UNIPROTKB|F1P0H1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
            Uniprot:F1P0H1
        Length = 703

 Score = 466 (169.1 bits), Expect = 6.5e-44, P = 6.5e-44
 Identities = 112/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  AM GRDMIG A+TG+GKT AF  P+
Sbjct:   247 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPM 306

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   307 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQA 365

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   366 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRP 425

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   426 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEIFPSGPSKWNWLT 484

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   485 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGI 544

Query:   395 NILIATDVAARGLD 408
              IL+ATDVAARGLD
Sbjct:   545 PILVATDVAARGLD 558


>ASPGD|ASPL0000037981 [details] [associations]
            symbol:AN2932 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
            PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
            Uniprot:Q5B948
        Length = 398

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 111/322 (34%), Positives = 179/322 (55%)

Query:    92 DSSKDEGLD-ISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKT 150
             +S+ DE  D    +++  +++  +   G  +   IQ+  + P ++G D+I +A++GTGKT
Sbjct:    17 ESNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKT 76

Query:   151 LAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGG 208
               F I  L K+   N K  +      L++APTRELA+Q++K        ++  C    GG
Sbjct:    77 ATFSISALQKLDP-NVKACQA-----LIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGG 130

Query:   209 TPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEV 268
             T +   M AL  G   VVGTPGR+ D+I+R  L   +++  +LDEAD+MLS GF E +  
Sbjct:   131 TAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYD 190

Query:   269 ILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY 328
             I + LPQ+ Q ++ SATMP  +  +T K++++P+ + LV   +  L +GI  + IA    
Sbjct:   191 IFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LVKKQELTL-EGIKQFYIAVEKE 248

Query:   329 E-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTL 386
             E K   +  L  E     + ++F  T+R  D L   + A+ +    +HGD+ Q+QR+  +
Sbjct:   249 EWKLDTLSDLY-ETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIM 307

Query:   387 SAFRDGRFNILIATDVAARGLD 408
               FR G   +LIATD+ ARG+D
Sbjct:   308 KEFRSGSSRVLIATDLLARGID 329


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 120/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +D+ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   161 SDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 220

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHESA-PSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + A  S    CV YG
Sbjct:   221 YADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYG 280

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   281 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 340

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   341 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 397

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   398 -VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQR 456

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   457 DREEALHQFRSGKSPILVATAVAARGLD 484


>UNIPROTKB|Q5F485 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
            localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
            UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
            GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
            HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
            NextBio:20822943 Uniprot:Q5F485
        Length = 944

 Score = 469 (170.2 bits), Expect = 1.4e-43, P = 1.4e-43
 Identities = 112/314 (35%), Positives = 173/314 (55%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   ++    + ++  + +   ++  PIQ   +  AM GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEIFPSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGI 549

Query:   395 NILIATDVAARGLD 408
              IL+ATDVAARGLD
Sbjct:   550 PILVATDVAARGLD 563


>DICTYBASE|DDB_G0293168 [details] [associations]
            symbol:ddx17 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
            RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
            PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
            KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
        Length = 785

 Score = 466 (169.1 bits), Expect = 1.4e-43, P = 1.4e-43
 Identities = 107/290 (36%), Positives = 168/290 (57%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKH--GRGRNPLCLVLAP 181
             PIQ      A++GRD+IG A+TG+GKTLAF +P    I+  N +        P+ LVLAP
Sbjct:   409 PIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLP---SIVHINAQPVLREDDGPIVLVLAP 465

Query:   182 TRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRN 239
             TRELA Q+++E ++      +   CVYGG     Q+ AL  GV+ V+ TPGR+ID+++  
Sbjct:   466 TRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESG 525

Query:   240 ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLK 299
               NL  V ++VLDEAD+ML +GF   +  I+ ++  +RQ++MFSAT P  +++L + +L 
Sbjct:   526 KTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLT 585

Query:   300 NPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADR 359
             + + V  +G ++      +         +EK   +   +    +  K IVF +T++  D 
Sbjct:   586 DHIQVH-IGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDD 644

Query:   360 LAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             L   +  S +    +HG+ SQ +R+  LS F++G   I+IATDVA+RGLD
Sbjct:   645 LQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLD 694


>POMBASE|SPAC1006.07 [details] [associations]
            symbol:SPAC1006.07 "translation initiation factor eIF4A
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
            "cytoplasmic translational initiation" evidence=NAS] [GO:0003743
            "translation initiation factor activity" evidence=ISO] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
            EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
            ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
            EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
            OMA:PILEMED NextBio:20803983 Uniprot:P47943
        Length = 392

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 112/322 (34%), Positives = 177/322 (54%)

Query:    92 DSSKDEGLD-ISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKT 150
             +++ DE +D    +++  +++  +   G  +   IQ+  + P +  RD++ +A++GTGKT
Sbjct:    11 ETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKT 70

Query:   151 LAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGG 208
               F I +L KI   + K  +      L+LAPTRELA+Q++K        ++  C    GG
Sbjct:    71 ATFSISVLQKI-DTSLKQCQA-----LILAPTRELAQQIQKVVVALGDLMNVECHACIGG 124

Query:   209 TPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEV 268
             T +   M AL  GV  VVGTPGRV D+I+R AL    VQ  VLDEAD+MLS GF + +  
Sbjct:   125 TLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYD 184

Query:   269 ILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY 328
             I + LP   Q ++ SATMP  +  +T K++++P+ + LV   D+   +GI  + +A    
Sbjct:   185 IFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRI-LV-KKDELTLEGIKQFYVAVEKE 242

Query:   329 E-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTL 386
             E K   +  L  E     + ++F  T+R  D L   +  + +    +HGD+ Q+QR+  +
Sbjct:   243 EWKLDTLCDLY-ETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLM 301

Query:   387 SAFRDGRFNILIATDVAARGLD 408
               FR G   ILI TD+ ARG+D
Sbjct:   302 HEFRTGSSRILITTDLLARGID 323


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 118/313 (37%), Positives = 181/313 (57%)

Query:   114 LARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN-----EKH 168
             LAR   +K  P+QK  +     GRD++  A+TG+GKT  F  P+L +  K       E  
Sbjct:   159 LAR--FTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQ 216

Query:   169 G----RGRNPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YGGTPISHQMRALDYGV 222
             G    R   P  +++APTRELA Q+  E  + +  S    CV YGG+PI +Q+R ++ G 
Sbjct:   217 GSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGC 276

Query:   223 DAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN----RQ 278
             D +V TPGR+ DL++R  ++L+ V+++VLDEAD+ML +GF   +  I+E         RQ
Sbjct:   277 DLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQ 336

Query:   279 SMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             ++MFSAT P  I+ L   +L +   L+V  VG + + +   + LY       +K S +  
Sbjct:   337 TLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKV-LY---VENQDKKSALLD 392

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             L++  +  G  ++F +TKR AD+L   +  +++    +HGD +QS+RER L+AFR G   
Sbjct:   393 LLSA-STDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAAT 451

Query:   396 ILIATDVAARGLD 408
             +L+AT VAARGLD
Sbjct:   452 LLVATAVAARGLD 464


>ASPGD|ASPL0000055571 [details] [associations]
            symbol:AN1266 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
            EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
            RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
            EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
            Uniprot:Q5BDW4
        Length = 1173

 Score = 470 (170.5 bits), Expect = 1.9e-43, P = 1.9e-43
 Identities = 117/320 (36%), Positives = 171/320 (53%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             GL I  LD+       + + G + L  IQ   +   M GRD+IG A+TG+GKT+AF IP+
Sbjct:   547 GLGIQTLDV-------IDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPM 599

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
               + IK          P+ L++ PTRELA Q+ K+      A +L  +C YGG PI  Q+
Sbjct:   600 F-RHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQI 658

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILER 272
               L  G + +V TPGR+IDL+  NA    NL  V +VVLDEAD+M  +GF   V  IL  
Sbjct:   659 AELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSN 718

Query:   273 LPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDS--DQKLADGISLYSIATSMYEK 330
             +  +RQ+++FSAT P  + +L  K L  P+ + + G S    ++   + + +        
Sbjct:   719 VRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRL 778

Query:   331 PSIIGQLI-TEHAKGGKCIVFTQTKRDADRLAHA-MAKSYNCEPLHGDISQSQRERTLSA 388
               ++G L  T+  +  + ++F   +  AD L    M K Y C  +HG   Q  R+ T+  
Sbjct:   779 LELLGNLYSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIED 838

Query:   389 FRDGRFNILIATDVAARGLD 408
             F+ G F +LIAT VAARGLD
Sbjct:   839 FKAGIFPVLIATSVAARGLD 858


>UNIPROTKB|Q5ZM36 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
            RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
            SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
            InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
        Length = 412

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 108/310 (34%), Positives = 171/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F I +L  + I
Sbjct:    44 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 103

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:   104 QVRETQA-------LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 156

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q +
Sbjct:   157 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 216

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   217 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 273

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   274 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 333

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   334 STDVWARGLD 343


>UNIPROTKB|Q2NL22 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
            GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
            GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
            GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
            IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
            ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
            Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
            InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
            Uniprot:Q2NL22
        Length = 411

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 108/310 (34%), Positives = 171/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F I +L  + I
Sbjct:    43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:   103 QVRETQA-------LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q +
Sbjct:   156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   216 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 272

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   333 STDVWARGLD 342


>UNIPROTKB|E2RDZ4 [details] [associations]
            symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
            "negative regulation of translation" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
            EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
            GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
        Length = 411

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 108/310 (34%), Positives = 171/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F I +L  + I
Sbjct:    43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:   103 QVRETQA-------LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q +
Sbjct:   156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   216 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 272

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   333 STDVWARGLD 342


>UNIPROTKB|P38919 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IDA] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
            "cytokine-mediated signaling pathway" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
            GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
            GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
            PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
            PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
            OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
            EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
            EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
            UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
            SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
            STRING:P38919 PhosphoSite:P38919 DMDM:20532400
            REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
            PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
            KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
            HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
            InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
            EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
            CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
            Uniprot:P38919
        Length = 411

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 108/310 (34%), Positives = 171/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F I +L  + I
Sbjct:    43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:   103 QVRETQA-------LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q +
Sbjct:   156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   216 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 272

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   333 STDVWARGLD 342


>UNIPROTKB|A6M931 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
            "regulation of translation" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
            UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
            GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
        Length = 411

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 108/310 (34%), Positives = 171/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F I +L  + I
Sbjct:    43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:   103 QVRETQA-------LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q +
Sbjct:   156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   216 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 272

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   333 STDVWARGLD 342


>RGD|1591139 [details] [associations]
            symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
            isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
            IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
            ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
            KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
        Length = 411

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 108/310 (34%), Positives = 171/310 (55%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F I +L  + I
Sbjct:    43 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:   103 QVRETQA-------LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q +
Sbjct:   156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   216 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 272

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   333 STDVWARGLD 342


>DICTYBASE|DDB_G0275443 [details] [associations]
            symbol:helB1 "putative RNA splicing factor"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
            reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
            GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
            EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
            ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
            GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
            ProtClustDB:CLSZ2500419 Uniprot:Q553B1
        Length = 1151

 Score = 469 (170.2 bits), Expect = 2.3e-43, P = 2.3e-43
 Identities = 111/290 (38%), Positives = 161/290 (55%)

Query:   125 IQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRE 184
             IQ   +   M GRD+IG ARTG+GKTLAF +P+   I+    K   G   + L+++PTRE
Sbjct:   535 IQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILA-QPKSAPGEGMIALIMSPTRE 593

Query:   185 LAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLI---KRN 239
             LA Q+  E  + +    L T CVYGG  IS Q+  L  G D VV TPGR+ID++    R 
Sbjct:   594 LALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRR 653

Query:   240 ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLK 299
               NL  V F+VLDEAD+M  +GF   +  I++ +  +RQ++MFSAT PP + ++  K L 
Sbjct:   654 ITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILN 713

Query:   300 NPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADR 359
              PL + + G      +D      +  +      +I  L   + KG + ++FT  +   D 
Sbjct:   714 KPLEI-IAGGRSIVSSDIEQFVEVRPTETRFRRLIELLSIWYHKG-QILIFTNRQETTDN 771

Query:   360 LAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             L   ++ S Y C  LHG   Q+ R+ T+S F++    ILIAT +A+RGLD
Sbjct:   772 LYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLD 821


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 458 (166.3 bits), Expect = 2.5e-43, P = 2.5e-43
 Identities = 121/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   181 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 240

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N K+GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   241 YTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 300

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   301 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 360

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   361 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 420

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
               A    +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   421 EEA----DKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 476

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   477 DREEALHQFRSGKSPILVATAVAARGLD 504


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 458 (166.3 bits), Expect = 2.5e-43, P = 2.5e-43
 Identities = 121/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   182 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 241

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N K+GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   242 YTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 301

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   302 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 361

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   362 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 421

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
               A    +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   422 EEA----DKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 477

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   478 DREEALHQFRSGKSPILVATAVAARGLD 505


>TAIR|locus:2065215 [details] [associations]
            symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
            HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
            IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
            ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
            PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
            KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
            OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
            Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
        Length = 760

 Score = 462 (167.7 bits), Expect = 3.2e-43, P = 3.2e-43
 Identities = 112/305 (36%), Positives = 165/305 (54%)

Query:   107 SQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE 166
             S  I++A+ ++   K   IQ   L   + GRD+IG A+TG+GKT AF +P++  I+   E
Sbjct:   236 SSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPE 295

Query:   167 KHGRGRNPLCLVLAPTRELAKQV--EKEFHESAPSLDTICVYGGTPISHQMRALDYGVDA 224
                R   P+ ++ APTRELA Q+  E +    A  L    VYGG     Q + L  G + 
Sbjct:   296 LQ-RDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEI 354

Query:   225 VVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSA 284
             VV TPGR+ID++K  AL +    ++VLDEAD+M  +GF   V  I+ ++  +RQ+++FSA
Sbjct:   355 VVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSA 414

Query:   285 TMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKG 344
             TMP  +  L  + L +P+ V  VG+      D   + ++  S  EK   + + +      
Sbjct:   415 TMPWKVEKLAREILSDPIRVT-VGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDE 473

Query:   345 GKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVA 403
             G  +VF   K   D + A     S+    LHGD  Q+ R  TL  F+ G  ++LIATDVA
Sbjct:   474 GDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVA 533

Query:   404 ARGLD 408
             ARGLD
Sbjct:   534 ARGLD 538


>FB|FBgn0037573 [details] [associations]
            symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
            melanogaster" [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=ISS] [GO:0006413 "translational
            initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
            oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
            DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
            GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
            EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
            STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
            InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
        Length = 399

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 113/339 (33%), Positives = 184/339 (54%)

Query:    75 IAWQHAQSAVDDYVAYDDSSKDEGLD-ISKLDISQDIVAALARRGISKLFPIQKAVLEPA 133
             +A ++AQ+     V ++ S   E +   + +++ ++++  +   G  K   IQ+  + P 
Sbjct:     1 MARKNAQAEDLSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPI 60

Query:   134 MQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEF 193
             ++GRD+I +A++GTGKT  F I IL  +    +   R    LCL  +PTRELA Q++K  
Sbjct:    61 VKGRDVIAQAQSGTGKTATFSISILQSL----DTTLRETQVLCL--SPTRELAVQIQKVI 114

Query:   194 HESAPSLDTIC--VYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVL 251
                   ++  C    GGT +   +R LDYG   V GTPGRV D+IKR  L    ++ +VL
Sbjct:   115 LALGDMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVL 174

Query:   252 DEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSD 311
             DEAD+ML+ GF E +  +   LP   Q ++ SAT+P  I  +T+K++ +P+ + LV   D
Sbjct:   175 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI-LV-KRD 232

Query:   312 QKLADGISLYSIATSMYE-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YN 369
             +   +GI  + +A    E K   +  L  +     + ++F  TKR  D L   M ++ + 
Sbjct:   233 ELTLEGIKQFFVAVEREEWKFDTLCDLY-DTLTITQAVIFCNTKRKVDWLTEKMREANFT 291

Query:   370 CEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
                +HGD+ Q +R+  +  FR G+  +LI TDV ARG+D
Sbjct:   292 VSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGID 330


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 457 (165.9 bits), Expect = 3.9e-43, P = 3.9e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   184 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 243

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   244 YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 303

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   304 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 363

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   364 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 420

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   421 -VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 479

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   480 DREEALHQFRSGKSPILVATAVAARGLD 507


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 465 (168.7 bits), Expect = 4.0e-43, P = 4.0e-43
 Identities = 112/296 (37%), Positives = 170/296 (57%)

Query:   120 SKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVL 179
             SK   IQ   +   M GRD+IG A+TG+GKTLAF +P+   I+   E    G  P+ ++L
Sbjct:   325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELE-EGDGPIAVIL 383

Query:   180 APTRELAKQVEKEFHESA-P-SLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIK 237
             APTRELA Q  KE ++ A P  L   C YGG  IS Q+  L  G + VV TPGR+ID++ 
Sbjct:   384 APTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLA 443

Query:   238 RNA---LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLT 294
              N+    NL  V ++VLDEAD+M   GF   +  ++  +  ++Q+++FSAT P  + +L 
Sbjct:   444 ANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALA 503

Query:   295 NKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTK 354
              K L  P+ + LVG      +D I+  ++  + ++K   + +L+  + + G  IVF   +
Sbjct:   504 RKVLDKPVEI-LVGGKSVVCSD-ITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQ 561

Query:   355 RDADRLAHAMAKS-YNC-EPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               AD +   + ++ YN   PLHG I Q  R+ +++ F+ G   +L+AT VAARGLD
Sbjct:   562 EKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLD 617


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 456 (165.6 bits), Expect = 4.0e-43, P = 4.0e-43
 Identities = 120/331 (36%), Positives = 184/331 (55%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQG-RDMIGRARTGTGKTLAFGIPIL 158
             + S +D+ + I+  +     ++  P+QK  + P ++G RD++  A+TG+GKT AF +PIL
Sbjct:   176 NFSDIDMGEIIMGNIELTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKTAAFLLPIL 234

Query:   159 DKI-----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV 205
              +I           +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV
Sbjct:   235 SQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 294

Query:   206 -YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAE 264
              YGG  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF  
Sbjct:   295 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEP 354

Query:   265 DVEVILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGI 318
              +  I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +
Sbjct:   355 QIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV 414

Query:   319 SLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDI 377
                 +     +K S +  ++         +VF +TK+ AD L   +  + Y C  +HGD 
Sbjct:   415 ----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR 470

Query:   378 SQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             SQ  RE  L  FR G+  IL+AT VAARGLD
Sbjct:   471 SQRDREEALHQFRSGKSPILVATAVAARGLD 501


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 456 (165.6 bits), Expect = 4.1e-43, P = 4.1e-43
 Identities = 119/330 (36%), Positives = 182/330 (55%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             + S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL 
Sbjct:   180 NFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 239

Query:   160 KI-----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV- 205
             +I           +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV 
Sbjct:   240 QIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 299

Query:   206 YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAED 265
             YGG     Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   
Sbjct:   300 YGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 359

Query:   266 VEVILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIS 319
             +  I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   + 
Sbjct:   360 IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV- 418

Query:   320 LYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDIS 378
                +     +K S +  L+    K    +VF +TK+ AD L + + +  Y C  +HGD S
Sbjct:   419 ---VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRS 475

Query:   379 QSQRERTLSAFRDGRFNILIATDVAARGLD 408
             Q  RE  L  FR GR  IL+AT VAARGLD
Sbjct:   476 QKDREEALHQFRSGRKPILVATAVAARGLD 505


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 456 (165.6 bits), Expect = 4.3e-43, P = 4.3e-43
 Identities = 120/331 (36%), Positives = 184/331 (55%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQG-RDMIGRARTGTGKTLAFGIPIL 158
             + S +D+ + I+  +     ++  P+QK  + P ++G RD++  A+TG+GKT AF +PIL
Sbjct:   179 NFSDIDMGEIIMGNIELTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKTAAFLLPIL 237

Query:   159 DKI-----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV 205
              +I           +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV
Sbjct:   238 SQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 297

Query:   206 -YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAE 264
              YGG  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF  
Sbjct:   298 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEP 357

Query:   265 DVEVILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGI 318
              +  I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +
Sbjct:   358 QIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV 417

Query:   319 SLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDI 377
                 +     +K S +  ++         +VF +TK+ AD L   +  + Y C  +HGD 
Sbjct:   418 ----VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDR 473

Query:   378 SQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             SQ  RE  L  FR G+  IL+AT VAARGLD
Sbjct:   474 SQRDREEALHQFRSGKSPILVATAVAARGLD 504


>DICTYBASE|DDB_G0283661 [details] [associations]
            symbol:ddx3 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
            SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
            KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
        Length = 712

 Score = 459 (166.6 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 113/323 (34%), Positives = 185/323 (57%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 163
             +D+   ++  +     +K  P+QK+ L   ++ RD++  A+TG+GKT AF  PI+  I+ 
Sbjct:   252 VDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILL 311

Query:   164 FNE-------KHG--RGRNPLCLVLAPTRELAKQVEKE---FHESAPSLDTICVYGGTPI 211
                       K G  R   P  LVLAPTRELA+Q+  E   F   +P + ++ +YGG  +
Sbjct:   312 DGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSP-VSSVVIYGGAEV 370

Query:   212 SHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE 271
              HQ+  LD G D +V T GR++DL+ R  ++LS+++++VLDEAD+ML +GF   +  I+ 
Sbjct:   371 FHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIIS 430

Query:   272 R--LP--QNRQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIAT 325
                +P  ++RQ++MFSAT P  I++L   +L N   L V +VG + Q +   I  Y +  
Sbjct:   431 EFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT-QNITQRIE-YVVEE 488

Query:   326 SMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRER 384
                +K S +   ++     G C++F +TKR  D L + +  +++    +HGD++Q +RE 
Sbjct:   489 ---DKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPEREN 545

Query:   385 TLSAFRDGRFNILIATDVAARGL 407
              L +FR      L+ATD+A+RGL
Sbjct:   546 ALQSFRSFATPFLVATDIASRGL 568


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 456 (165.6 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   183 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 242

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   243 YADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 302

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   303 GAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 419

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   420 -VWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   479 DREEALHQFRSGKSPILVATAVAARGLD 506


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 456 (165.6 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   183 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 242

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   243 YADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 302

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   303 GAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 419

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   420 -VWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   479 DREEALHQFRSGKSPILVATAVAARGLD 506


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 455 (165.2 bits), Expect = 5.9e-43, P = 5.9e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   182 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 241

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   242 YSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 301

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   302 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 361

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   362 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 418

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   419 -VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 477

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   478 DREEALHQFRSGKSPILVATAVAARGLD 505


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 455 (165.2 bits), Expect = 5.9e-43, P = 5.9e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   183 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 242

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   243 YSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 302

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   303 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 419

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   420 -VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   479 DREEALHQFRSGKSPILVATAVAARGLD 506


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 455 (165.2 bits), Expect = 6.1e-43, P = 6.1e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   183 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 242

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   243 YSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 302

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   303 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 419

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   420 -VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   479 DREEALHQFRSGKSPILVATAVAARGLD 506


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 455 (165.2 bits), Expect = 6.1e-43, P = 6.1e-43
 Identities = 119/328 (36%), Positives = 181/328 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   183 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 242

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   243 YSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 302

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   303 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 419

Query:   322 SIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQS 380
              +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ 
Sbjct:   420 -VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478

Query:   381 QRERTLSAFRDGRFNILIATDVAARGLD 408
              RE  L  FR G+  IL+AT VAARGLD
Sbjct:   479 DREEALHQFRSGKSPILVATAVAARGLD 506


>CGD|CAL0005725 [details] [associations]
            symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
            EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
            ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
            KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
        Length = 884

 Score = 462 (167.7 bits), Expect = 6.3e-43, P = 6.3e-43
 Identities = 115/304 (37%), Positives = 176/304 (57%)

Query:   125 IQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRE 184
             IQ   L   + GRD+IG A+TG+GKTL++ +P+L + I+  +     + P+ L+L+PTRE
Sbjct:   320 IQSQALPTILSGRDVIGIAKTGSGKTLSYVLPML-RHIQDQQFSKDNQGPIGLILSPTRE 378

Query:   185 LAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNA- 240
             LA Q+EKE   F +   +L   C YGG+ I +Q+  L  GV+ +VGTPGRVIDL+  N+ 
Sbjct:   379 LALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSG 438

Query:   241 --LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYL 298
               LNL    FVVLDEAD+M  +GF   V  IL ++  +RQ+++FSAT P  + +L  + L
Sbjct:   439 RVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQIL 498

Query:   299 KNPLTVDLVGDS--DQKLADGISLYSIATS---MYEKPSI--IGQLIT----EHAKGGKC 347
              +P+ + + G S    ++   + L+  +      Y++  +  +  ++T    EH    K 
Sbjct:   499 TDPVVIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDS-KI 557

Query:   348 IVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFR--DGRFNILIATDVAA 404
             +VFT+ + DAD L A+ ++  Y    +HG   Q  R+  +  F   D   NILIAT +AA
Sbjct:   558 LVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAA 617

Query:   405 RGLD 408
             RGLD
Sbjct:   618 RGLD 621


>UNIPROTKB|Q5ADL0 [details] [associations]
            symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
            PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
            EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
            ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
            KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
        Length = 884

 Score = 462 (167.7 bits), Expect = 6.3e-43, P = 6.3e-43
 Identities = 115/304 (37%), Positives = 176/304 (57%)

Query:   125 IQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRE 184
             IQ   L   + GRD+IG A+TG+GKTL++ +P+L + I+  +     + P+ L+L+PTRE
Sbjct:   320 IQSQALPTILSGRDVIGIAKTGSGKTLSYVLPML-RHIQDQQFSKDNQGPIGLILSPTRE 378

Query:   185 LAKQVEKE---FHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNA- 240
             LA Q+EKE   F +   +L   C YGG+ I +Q+  L  GV+ +VGTPGRVIDL+  N+ 
Sbjct:   379 LALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSG 438

Query:   241 --LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYL 298
               LNL    FVVLDEAD+M  +GF   V  IL ++  +RQ+++FSAT P  + +L  + L
Sbjct:   439 RVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQIL 498

Query:   299 KNPLTVDLVGDS--DQKLADGISLYSIATS---MYEKPSI--IGQLIT----EHAKGGKC 347
              +P+ + + G S    ++   + L+  +      Y++  +  +  ++T    EH    K 
Sbjct:   499 TDPVVIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDS-KI 557

Query:   348 IVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFR--DGRFNILIATDVAA 404
             +VFT+ + DAD L A+ ++  Y    +HG   Q  R+  +  F   D   NILIAT +AA
Sbjct:   558 LVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAA 617

Query:   405 RGLD 408
             RGLD
Sbjct:   618 RGLD 621


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 456 (165.6 bits), Expect = 9.2e-43, P = 9.2e-43
 Identities = 121/330 (36%), Positives = 183/330 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   225 SDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 284

Query:   162 -----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YG 207
                        +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV YG
Sbjct:   285 YSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 344

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVE 267
             G  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   + 
Sbjct:   345 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 404

Query:   268 VILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLY 321
              I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +   
Sbjct:   405 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV--- 461

Query:   322 SIATSMYEKPSIIGQLI--TEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDIS 378
              +     +K S +  L+  TE  K    +VF +TK+ AD L   +  + Y C  +HGD S
Sbjct:   462 -VWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 520

Query:   379 QSQRERTLSAFRDGRFNILIATDVAARGLD 408
             Q  RE  L  FR G+  IL+AT VAARGLD
Sbjct:   521 QRDREEALHQFRSGKSPILVATAVAARGLD 550


>UNIPROTKB|P0A8J8 [details] [associations]
            symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
            catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
            PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
            ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
            PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
            EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
            KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
            EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
            ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
            BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
            Uniprot:P0A8J8
        Length = 421

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 111/304 (36%), Positives = 163/304 (53%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHG 169
             +V AL ++G     PIQ   L   + GRD+ G+A+TGTGKT+AF       ++       
Sbjct:    20 VVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIAD 79

Query:   170 RGRN-PLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVV 226
             R  N P  L++APTRELA Q+  +      A  L     YGG     Q++ L+ GVD ++
Sbjct:    80 RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILI 139

Query:   227 GTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP--QNRQSMMFSA 284
             GT GR+ID  K+N +NL  +Q VVLDEAD+M  +GF +D+  +  R+P    R +M+FSA
Sbjct:   140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSA 199

Query:   285 TMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKG 344
             T+   +R L  + + N   +++  + +QK    I       S  EK  ++  LI E    
Sbjct:   200 TLSYRVRELAFEQMNNAEYIEV--EPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPD 257

Query:   345 GKCIVFTQTKRDADRL-AHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVA 403
              + I+F  TK   + +  H  A  +    L GD++Q +R R L  F  G  +IL+ATDVA
Sbjct:   258 -RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVA 316

Query:   404 ARGL 407
             ARGL
Sbjct:   317 ARGL 320


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 120/329 (36%), Positives = 181/329 (55%)

Query:   102 SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             S +D+ + I+  +     ++  P+QK  +    + RD++  A+TG+GKT AF +PIL +I
Sbjct:   159 SDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 218

Query:   162 -----------IKF-NEKHGRGRN-PLCLVLAPTRELAKQVEKEFHESA-PSLDTICV-Y 206
                        +K  N ++GR +  P+ LVLAPTRELA Q+ +E  + A  S    CV Y
Sbjct:   219 YADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVY 278

Query:   207 GGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDV 266
             GG  I  Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   +
Sbjct:   279 GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI 338

Query:   267 EVILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISL 320
               I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   +  
Sbjct:   339 RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV-- 396

Query:   321 YSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQ 379
               +     +K S +  L+    K    +VF +TK+ AD L   +  + Y C  +HGD SQ
Sbjct:   397 --VWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQ 454

Query:   380 SQRERTLSAFRDGRFNILIATDVAARGLD 408
               RE  L  FR G+  IL+AT VAARGLD
Sbjct:   455 RDREEALHQFRSGKSPILVATAVAARGLD 483


>ZFIN|ZDB-GENE-040426-915 [details] [associations]
            symbol:eif4a3 "eukaryotic translation initiation
            factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
            GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
            UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
            PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
            NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
        Length = 406

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 107/310 (34%), Positives = 170/310 (54%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-I 162
             + + +D++  +   G  K   IQ+  ++  ++GRD+I ++++GTGKT  F + +L  + I
Sbjct:    38 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDI 97

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDTIC--VYGGTPISHQMRALDY 220
             +  E          L+LAPTRELA Q++K        ++  C    GGT +   +R LDY
Sbjct:    98 QVRETQA-------LILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDY 150

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSM 280
             G   V GTPGRV D+I+R +L    ++ +VLDEAD+ML+ GF E +  +   LP   Q  
Sbjct:   151 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVC 210

Query:   281 MFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYE-KPSIIGQLIT 339
             + SAT+P  I  +TNK++ +P+ + LV   D+   +GI  + +A    E K   +  L  
Sbjct:   211 LISATLPHEILEMTNKFMTDPIRI-LV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLY- 267

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             +     + ++F  TKR  D L   M ++ +    +HGD+ Q +RE  +  FR G   +LI
Sbjct:   268 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 327

Query:   399 ATDVAARGLD 408
             +TDV ARGLD
Sbjct:   328 STDVWARGLD 337


>UNIPROTKB|E2RFF1 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
            Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
        Length = 933

 Score = 461 (167.3 bits), Expect = 9.6e-43, P = 9.6e-43
 Identities = 110/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   550 PVLVATDVAARGLD 563


>UNIPROTKB|Q86XP3 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
            localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
            EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
            EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
            PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
            ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
            MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
            PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
            Ensembl:ENST00000389924 Ensembl:ENST00000457800
            Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
            KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
            HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
            MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
            InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
            NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
            Genevestigator:Q86XP3 Uniprot:Q86XP3
        Length = 938

 Score = 461 (167.3 bits), Expect = 9.8e-43, P = 9.8e-43
 Identities = 110/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   550 PVLVATDVAARGLD 563


>UNIPROTKB|F1RSJ7 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
            Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
        Length = 941

 Score = 461 (167.3 bits), Expect = 9.8e-43, P = 9.8e-43
 Identities = 110/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   550 PVLVATDVAARGLD 563


>DICTYBASE|DDB_G0288501 [details] [associations]
            symbol:ddx42 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
            STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
            KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
        Length = 986

 Score = 461 (167.3 bits), Expect = 1.1e-42, P = 1.1e-42
 Identities = 109/304 (35%), Positives = 168/304 (55%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK--FNEK 167
             ++ A+A++ I    PIQK  +  A+ GRD+I  A+TG+GKT  F  P +  I+   + EK
Sbjct:   316 LLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEK 375

Query:   168 HGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGVDAV 225
                G  P+ L LAPTRELA Q+  E  + +    L T  +YGG     Q + L  G + +
Sbjct:   376 ---GDGPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEII 432

Query:   226 VGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSAT 285
             V TPGR+ID+IK  A  L+ V ++VLDEAD+M   GF   V  I+  +  +RQ+++FSAT
Sbjct:   433 VATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSAT 492

Query:   286 MPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGG 345
               P +       L +P+ +  +G      +D   +  +  S  +K + +   +      G
Sbjct:   493 FKPNVEEFARTILSDPIKIS-IGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQG 551

Query:   346 KCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAA 404
               ++F  TK   ++L+  + K  +    LHGD +Q +R +T+  F++G+ NILIATDVAA
Sbjct:   552 SVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAA 611

Query:   405 RGLD 408
             RGLD
Sbjct:   612 RGLD 615


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 458 (166.3 bits), Expect = 1.1e-42, P = 1.1e-42
 Identities = 127/335 (37%), Positives = 189/335 (56%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             D+   +I ++ VA LAR    K  P+QK  +   + GRD++  A+TG+GKT AF +PIL+
Sbjct:   299 DVQLTEIIRNNVA-LAR--YDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILN 355

Query:   160 KIIKFNE--------KHGRGRN-PLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGG 208
             ++ +           ++ R +  PL LVLAPTRELA Q+ +E  + A    +    +YGG
Sbjct:   356 QMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGG 415

Query:   209 TPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEV 268
                S QMR LD G   +V TPGR+ D+I R  + L  ++F+VLDEAD+ML +GF   +  
Sbjct:   416 NNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRR 475

Query:   269 ILERL---PQN-RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYS 322
             I+E+L   P   RQ++MFSAT P  I+ L + +L N   L V  VG + + +   I L+ 
Sbjct:   476 IVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTI-LW- 533

Query:   323 IATSMYE--KPSIIGQLIT------EHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPL 373
                 +YE  K S +  L++      E+ K    ++F +TK+ AD L   + + ++    +
Sbjct:   534 ----VYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSI 589

Query:   374 HGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             HGD +Q +RE  L  FR G   IL+AT VAARGLD
Sbjct:   590 HGDRTQKEREEALRCFRSGDCPILVATAVAARGLD 624


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 107/298 (35%), Positives = 167/298 (56%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE-KHGRGRN---PLCLVL 179
             P+Q+  +   +  RD++  A+TG+GKT AF  PI+  I+K    +  RG     P  ++L
Sbjct:   176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235

Query:   180 APTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIK 237
             +PTRELA Q+  E  + +    +  +  YGGTPI  Q+R L+ G D +V TPGR+ DL++
Sbjct:   236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295

Query:   238 RNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERL---PQN-RQSMMFSATMPPWIRSL 293
             R  +++  ++F+ LDEAD+ML +GF   +  I+E++   P+  RQ+M+FSAT P  I+ L
Sbjct:   296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355

Query:   294 TNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFT 351
                ++ N   L V  VG S   +   +     +        ++        K    +VF 
Sbjct:   356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFV 415

Query:   352 QTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +TKR AD L + +  + +    +HGD +Q +RE  L +F+ GR  IL+ATDVAARGLD
Sbjct:   416 ETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLD 473


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 396 (144.5 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
 Identities = 100/254 (39%), Positives = 144/254 (56%)

Query:   165 NEKHGRGRN-PLCLVLAPTRELAKQVEKEFHESA-PSLDTICV-YGGTPISHQMRALDYG 221
             N K+ R +  P+ LVLAPTRELA Q+  E  + A  S    CV YGG  I  Q+R L+ G
Sbjct:   305 NGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERG 364

Query:   222 VDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LPQ--NR 277
                +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   +  I+E+  +P   +R
Sbjct:   365 CHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSR 424

Query:   278 QSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             Q+MMFSAT P  I+ L   +L+    L V  VG + + +   +    +     +K S + 
Sbjct:   425 QTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKV----VWVEENDKRSFLL 480

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
              L+    K    +VF +TK+ AD L   + +  Y C  +HGD SQ  RE  L  FR GR 
Sbjct:   481 DLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRC 540

Query:   395 NILIATDVAARGLD 408
              I++AT VAARGLD
Sbjct:   541 PIMVATAVAARGLD 554

 Score = 85 (35.0 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
 Identities = 18/58 (31%), Positives = 34/58 (58%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI 161
             +D+ + I+  +     ++  P+QK  +      RD++  A+TG+GKT AF +P+L +I
Sbjct:   228 VDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQI 285


>UNIPROTKB|Q5R7D1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
            localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
            RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
            GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
        Length = 942

 Score = 460 (167.0 bits), Expect = 1.3e-42, P = 1.3e-42
 Identities = 110/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   550 PVLVATDVAARGLD 563


>UNIPROTKB|A4RN46 [details] [associations]
            symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
            PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
            "mycelium development" evidence=IEP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
            ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
            KEGG:mgr:MGG_15532 Uniprot:A4RN46
        Length = 1012

 Score = 460 (167.0 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 115/330 (34%), Positives = 176/330 (53%)

Query:    93 SSKDEGLDISKLDI---SQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGK 149
             S KD    + K  +   ++ I+  +A+    K   IQ   L   M GRD++G A+TG+GK
Sbjct:   369 SGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGK 428

Query:   150 TLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLDT-----IC 204
             T+AF +P+  + IK  E       P+ L+L PTRELA Q+   F +  P L T     +C
Sbjct:   429 TMAFLLPMF-RHIKDQEPVKDNEGPIGLILTPTRELAVQI---FRDCKPFLKTLGLRAVC 484

Query:   205 VYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRN---ALNLSEVQFVVLDEADQMLSVG 261
              YGG PI  Q+  L  G + VV T GR+IDL+  N    ++L    ++VLDEAD+M  +G
Sbjct:   485 AYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMG 544

Query:   262 FAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDS--DQKLADGIS 319
             F   V  I   +  +RQ+++FSATMP  + +L  K LKNP+ +++ G S    ++   + 
Sbjct:   545 FEPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVE 604

Query:   320 LYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDIS 378
             +    +       ++G+L  +     + ++F + +  AD L   +  K Y C  LHG   
Sbjct:   605 IRDEKSKFNRLLELLGELYKDD-DDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKD 663

Query:   379 QSQRERTLSAFRDGRFNILIATDVAARGLD 408
             Q  R+ T+S F+ G   ++IAT VAARGLD
Sbjct:   664 QVDRDSTISDFKSGVCPVMIATSVAARGLD 693


>MGI|MGI:1919297 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
            CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
            EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
            IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
            ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
            PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
            Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
            UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
            InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
            Genevestigator:Q810A7 Uniprot:Q810A7
        Length = 929

 Score = 459 (166.6 bits), Expect = 1.6e-42, P = 1.6e-42
 Identities = 110/314 (35%), Positives = 171/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA  + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 549

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   550 PVLVATDVAARGLD 563


>UNIPROTKB|Q91372 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
            "mitochondrial cloud" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
            GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
            UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
            KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
        Length = 700

 Score = 453 (164.5 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 118/361 (32%), Positives = 203/361 (56%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P D + +I  Q+ QS ++    D +  D + KD     L   + ++ + +   +AR G  
Sbjct:   237 PPDGEDNIFRQY-QSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYV 295

Query:   121 KLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN---EKHGRGRNPLCL 177
             KL P+QK  +   M GRD++  A+TG+GKT AF +PIL  ++       ++ + + P  +
Sbjct:   296 KLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQLQEPEAI 355

Query:   178 VLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDL 235
             ++APTREL  Q+  +  + +    +  + VYGG    H MR ++ G + +  TPGR++D+
Sbjct:   356 IIAPTRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDI 415

Query:   236 IKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LP--QNRQSMMFSATMPPWIR 291
             + +  + LS+++++VLDEAD+ML +GFA ++E ++ +  +P  + RQ++MFSAT P  IR
Sbjct:   416 VSKEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIR 475

Query:   292 SLTNKYLKNP---LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCI 348
              L + YLK+    + V LVG +   +A  + L        EK   + +++    K  + +
Sbjct:   476 RLASNYLKSEHLFVVVGLVGGACSDVAQTV-LEMRENGKMEK---LLEILKSSEKE-RTM 530

Query:   349 VFTQTKRDADRLA-HAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGL 407
             +F  TK+ AD +A +   + ++   +HGD  Q QRE  L  FR G+  +++ T VAARGL
Sbjct:   531 IFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGL 590

Query:   408 D 408
             D
Sbjct:   591 D 591


>CGD|CAL0000056 [details] [associations]
            symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
            ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
            KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
        Length = 539

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 113/310 (36%), Positives = 174/310 (56%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L++  D++ ++     +K  PIQ   +  A++G+D+IG A+TG+GKT AF IPIL  + 
Sbjct:   127 ELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLW 186

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDY 220
                + +        LVLAPTREL  Q++  F    S+  L + C+ GG  +  Q R L  
Sbjct:   187 HAQQPY------FALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMR 240

Query:   221 GVDAVVGTPGRVIDLIKRN-ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
                 +V TPGR++D ++     +L  ++++V+DEAD++L + F   ++ IL+ +P  R +
Sbjct:   241 KPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKRTT 300

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLIT 339
              +FSATM   I  L    L NP+ V +   S  + AD +    +  +   K +I+  L+ 
Sbjct:   301 YLFSATMTNKIEKLQRASLHNPVRVAV--SSKYQTADNLVQSMMLVNDGYKNTILIHLLN 358

Query:   340 EHAKGGKCIVFTQTKRDADRLAH-AMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
             E   G   IVFT+T   A R A  A    +N  PLHG +SQSQR  +L+ F+  + NIL+
Sbjct:   359 EFM-GKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILV 417

Query:   399 ATDVAARGLD 408
             ATDVAARGLD
Sbjct:   418 ATDVAARGLD 427


>WB|WBGene00012059 [details] [associations]
            symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
            GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
            OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
            ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
            EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
            UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
            NextBio:892086 Uniprot:P34580
        Length = 489

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 112/332 (33%), Positives = 178/332 (53%)

Query:    81 QSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMI 140
             +  V + +  DD    +    ++L +SQ +  A  R G  K   IQ+A L  A+QG+D+I
Sbjct:    26 KKVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVI 85

Query:   141 GRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSL 200
             G A TG+GKT AF IP+L  ++   +         CLVL PTRELA Q+ ++F      +
Sbjct:    86 GLAETGSGKTGAFAIPVLQSLLDHPQAF------FCLVLTPTRELAFQIGQQFEALGSGI 139

Query:   201 DTIC--VYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRN-ALNLSEVQFVVLDEADQM 257
               I   + GG  ++ Q  AL      +V TPGR++D ++     NL  ++F+++DEAD++
Sbjct:   140 GLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRI 199

Query:   258 LSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADG 317
             L++ F  +++ IL+ +P+ R++ +FSATM   +  L    L++P  V +   S  K  D 
Sbjct:   200 LNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSV--SSRYKTVDN 257

Query:   318 ISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGD 376
             +  + I      K + +  L+ EHA G   IVF  T     ++A  + +      PLHG 
Sbjct:   258 LKQHYIFVPNKYKETYLVYLLNEHA-GNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQ 316

Query:   377 ISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +SQ +R  +L+ F+     IL+ TDVAARGLD
Sbjct:   317 MSQEKRLGSLNKFKSKAREILVCTDVAARGLD 348


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 452 (164.2 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 124/430 (28%), Positives = 220/430 (51%)

Query:    52 KSRFSAGTREFHAISRPLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKL 104
             +S  S G +  +    P + + SI + H Q+ ++    D +  + S  D     L   + 
Sbjct:   208 ESSDSQGPKVTYIPPPPPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEA 266

Query:   105 DISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKF 164
             ++ Q +   +A+ G +KL P+QK  +   + GRD++  A+TG+GKT AF +PIL  +++ 
Sbjct:   267 NLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRD 326

Query:   165 NEKHGRGRN---PLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALD 219
                  R +    P C+++APTREL  Q+  E  + +    +  + +YGGT   H +R + 
Sbjct:   327 GITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIV 386

Query:   220 YGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--Q 275
              G + +  TPGR++D+I +  + L +V+++VLDEAD+ML +GF  +++ ++    +P  +
Sbjct:   387 QGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKE 446

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
              RQ+++FSAT P  I+ L   +LK+      VG       D +    +    Y K   + 
Sbjct:   447 QRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRD-VQQTILQVGQYSKREKLV 505

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             +++  +    + +VF +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+ 
Sbjct:   506 EIL-RNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 564

Query:   395 NILIATDVAARGLDXXXXXXXXXXXXXXXXXQFLSTQISRPGK----SRVLSEMLDADLL 450
              +L+AT VAARGLD                 +++  +I R G+     R +S   D D  
Sbjct:   565 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH-RIGRTGRCGNTGRAIS-FFDTDSD 622

Query:   451 SSQGSPLKEV 460
             +    PL +V
Sbjct:   623 NHLAQPLVKV 632


>DICTYBASE|DDB_G0293064 [details] [associations]
            symbol:DDB_G0293064 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
            RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
            EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
            InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
        Length = 573

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 101/311 (32%), Positives = 172/311 (55%)

Query:   108 QDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEK 167
             Q  +     +   K  P+Q      A+ G DM+G ++TG+GKTL+F +P ++ I+    +
Sbjct:   148 QSTIKNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILA-QPR 206

Query:   168 HGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAV 225
                   P  LV+APTRELA Q+ +E  +     +++   +YGG P   Q   L      V
Sbjct:   207 QSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIV 266

Query:   226 VGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSAT 285
             VGTPGR+ID ++   L+L  + F+V+DEAD+++ +GF + ++ I   +  +RQ + +SAT
Sbjct:   267 VGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSAT 326

Query:   286 MPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISL-YSIATSMYEKPSII----GQLITE 340
              P  + S   K+++ P+ +  +G S       IS  + I  +  +K   +    G++ + 
Sbjct:   327 WPKKVSSFAEKHIRTPIRLQ-IGSSQLTANKNISQKFKIVPTDADKVDALMDTLGEIYSA 385

Query:   341 HAKGGKCIVFTQTKRDADRLAHAMAKS---YNCEPLHGDISQSQRERTLSAFRDGRFNIL 397
               K  + ++FT TK+ AD L H +  +      + LHGD+ Q++RER +  F++ R +I+
Sbjct:   386 DEKA-QTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQDFKNKRLDIV 444

Query:   398 IATDVAARGLD 408
             +ATDVA+RGLD
Sbjct:   445 VATDVASRGLD 455


>UNIPROTKB|Q8EGU0 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 108/312 (34%), Positives = 179/312 (57%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII- 162
             L +S  ++ A+   G  +L  +Q+ V+  A+ G+D++  A+TGTGKT AF +P+L+++  
Sbjct:     6 LGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQLAA 65

Query:   163 KFNEKHGRGRNPL--CLVLAPTRELAKQV---EKEFHESAPSLDTICVYGGTPISHQMRA 217
             K  +K      PL   LV+ PTRELA QV    +++ +  P L T+ VYGG  ++ Q + 
Sbjct:    66 KPADK------PLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKG 118

Query:   218 LDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR 277
             ++ GVD +V TPGR+ D+I +  L+LS V  +V+DEAD+ML +GF  D+E +   +    
Sbjct:   119 VEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVH 178

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             Q+M+FSAT    ++ L++K L  P  V++  ++     + + +Y +      K  ++ +L
Sbjct:   179 QTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQL-VYRV--DKRRKAELLSEL 235

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             +  +    + +VF  TK  A+ L   +     +    HGD +Q  R R L  F+ G+  +
Sbjct:   236 VGRN-NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRV 294

Query:   397 LIATDVAARGLD 408
             L+ATDVAARGLD
Sbjct:   295 LVATDVAARGLD 306


>TIGR_CMR|SO_1501 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 108/312 (34%), Positives = 179/312 (57%)

Query:   104 LDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII- 162
             L +S  ++ A+   G  +L  +Q+ V+  A+ G+D++  A+TGTGKT AF +P+L+++  
Sbjct:     6 LGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQLAA 65

Query:   163 KFNEKHGRGRNPL--CLVLAPTRELAKQV---EKEFHESAPSLDTICVYGGTPISHQMRA 217
             K  +K      PL   LV+ PTRELA QV    +++ +  P L T+ VYGG  ++ Q + 
Sbjct:    66 KPADK------PLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKG 118

Query:   218 LDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNR 277
             ++ GVD +V TPGR+ D+I +  L+LS V  +V+DEAD+ML +GF  D+E +   +    
Sbjct:   119 VEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVH 178

Query:   278 QSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             Q+M+FSAT    ++ L++K L  P  V++  ++     + + +Y +      K  ++ +L
Sbjct:   179 QTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQL-VYRV--DKRRKAELLSEL 235

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             +  +    + +VF  TK  A+ L   +     +    HGD +Q  R R L  F+ G+  +
Sbjct:   236 VGRN-NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRV 294

Query:   397 LIATDVAARGLD 408
             L+ATDVAARGLD
Sbjct:   295 LVATDVAARGLD 306


>SGD|S000001107 [details] [associations]
            symbol:RRP3 "Protein involved in rRNA processing"
            species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
            SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
            LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
            GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
            OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
            RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
            DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
            PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
            KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
            GermOnline:YHR065C Uniprot:P38712
        Length = 501

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 112/324 (34%), Positives = 187/324 (57%)

Query:    91 DDSSKDEGLD-ISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGK 149
             +++++DE  +  S+L++  +++ A      SK  PIQ   + PA++G D+IG A+TG+GK
Sbjct:    72 ENTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131

Query:   150 TLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYG 207
             T AF IPIL+++    E +       C +LAPTRELA+Q+++ F    S   + + C+ G
Sbjct:   132 TAAFAIPILNRLWHDQEPYYA-----C-ILAPTRELAQQIKETFDSLGSLMGVRSTCIVG 185

Query:   208 GTPISHQMRALDYGVDAVVGTPGRVIDLIKRN-ALNLSEVQFVVLDEADQMLSVGFAEDV 266
             G  +  Q R L      ++ TPGR++D ++     +L +++F+V+DEAD++L + F   +
Sbjct:   186 GMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVL 245

Query:   267 EVILERLP-QNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT 325
             + IL+ +P Q R + +FSATM   I  L    L NP+    V +  Q +   +    +  
Sbjct:   246 DRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKC-AVSNKYQTVDTLVQTLMVVP 304

Query:   326 SMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRER 384
                +   +I  L+ E   G   I+FT+TK +A+RL+       ++   LHGD++Q+QR  
Sbjct:   305 GGLKNTYLI-YLLNEFI-GKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMG 362

Query:   385 TLSAFRDGRFNILIATDVAARGLD 408
             +L  F+ G+ +IL+ATDVAARGLD
Sbjct:   363 SLDLFKAGKRSILVATDVAARGLD 386


>POMBASE|SPCC10H11.01 [details] [associations]
            symbol:prp11 "ATP-dependent RNA helicase Prp11"
            species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
            "spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
            RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
            IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
            GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
            NextBio:20800113 Uniprot:Q9P7C7
        Length = 1014

 Score = 446 (162.1 bits), Expect = 3.3e-42, Sum P(2) = 3.3e-42
 Identities = 115/343 (33%), Positives = 176/343 (51%)

Query:    84 VDDYVAYDDSSKDEGLDI-------SKLDISQDIVAALARRGISKLFPIQKAVLEPAMQG 136
             VD+  A  D  K  G+D        S+  +S   ++ +   G  K   IQ   +     G
Sbjct:   396 VDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSG 455

Query:   137 RDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHES 196
             RD+IG A+TG+GKT+AF +P+  + IK       G  P+ +++ PTRELA Q+   F E 
Sbjct:   456 RDVIGVAKTGSGKTIAFLLPMF-RHIKDQRPLKTGEGPIAIIMTPTRELAVQI---FREC 511

Query:   197 APSLDTI-----CVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNA---LNLSEVQF 248
              P L  +     C YGG PI  Q+  L  G + VV TPGR+ID++  NA    NL    +
Sbjct:   512 KPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTY 571

Query:   249 VVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVG 308
             +VLDEAD+M  +GF   V  I+  +  +RQ+++FSAT P  + +L  K LK P+ + + G
Sbjct:   572 LVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGG 631

Query:   309 DS--DQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRL-AHAMA 365
              S    ++   + +    +       ++G+L        + +VF   +  AD L +  M 
Sbjct:   632 RSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDV-RTLVFVDRQESADALLSDLMK 690

Query:   366 KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             + Y    +HG   Q  R+ T+S ++ G F++LIAT V ARGLD
Sbjct:   691 RGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLD 733

 Score = 38 (18.4 bits), Expect = 3.3e-42, Sum P(2) = 3.3e-42
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query:    86 DYVAYDDSSKDEG 98
             DY  YDDS   +G
Sbjct:    21 DYRKYDDSEDQKG 33


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 449 (163.1 bits), Expect = 3.8e-42, P = 3.8e-42
 Identities = 111/358 (31%), Positives = 197/358 (55%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P + + SI + H Q+ ++    D +  + S  D     L   + ++ Q +   +A+ G +
Sbjct:   225 PPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYT 283

Query:   121 KLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRN---PLCL 177
             KL P+QK  +   + GRD++  A+TG+GKT AF +PIL  +++      R +    P C+
Sbjct:   284 KLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECI 343

Query:   178 VLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDL 235
             ++APTREL  Q+  E  + +    +  + +YGGT   H +R +  G + +  TPGR++D+
Sbjct:   344 IVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDI 403

Query:   236 IKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--QNRQSMMFSATMPPWIR 291
             I +  + L +V+++VLDEAD+ML +GF  +++ ++    +P  + RQ+++FSAT P  I+
Sbjct:   404 IGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQ 463

Query:   292 SLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFT 351
              L  ++LK+      VG       D +    +    Y K   + +++  +    + +VF 
Sbjct:   464 RLAGEFLKSNYLFVAVGQVGGACRD-VQQSILQVGQYSKREKLVEIL-RNIGDERTMVFV 521

Query:   352 QTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+  +L+AT VAARGLD
Sbjct:   522 ETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLD 579


>ZFIN|ZDB-GENE-050706-53 [details] [associations]
            symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
            Uniprot:E7F401
        Length = 910

 Score = 455 (165.2 bits), Expect = 3.9e-42, P = 3.9e-42
 Identities = 107/288 (37%), Positives = 160/288 (55%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTR 183
             PIQ   +  A+ GRD IG A+TG+GKT AF  PIL  I+   E    G  P+ +++ PTR
Sbjct:   282 PIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEP-GEGPIAVIVCPTR 340

Query:   184 ELAKQVEKEFHE--SAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNAL 241
             EL +Q+  E      A  L ++ VYGG  +  Q +AL  G + VV TPGR+ID +K+ A 
Sbjct:   341 ELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKAT 400

Query:   242 NLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNP 301
             +L  V F+V DEAD+M  +GF   V  I   +  +RQ+++FSAT    I  L    L +P
Sbjct:   401 SLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDP 460

Query:   302 LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLA 361
             + V + GD  +   D   +  +  S  +K   + + + E    G  +VF   K + + LA
Sbjct:   461 IRV-VQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCEELA 519

Query:   362 -HAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
              + + + Y+   LHGD+ QS+R + ++ F+     +L+ATDVAARGLD
Sbjct:   520 TNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLD 567


>WB|WBGene00013214 [details] [associations]
            symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
            SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
            GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
            WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
            Uniprot:Q9XVZ6
        Length = 504

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 113/310 (36%), Positives = 170/310 (54%)

Query:   110 IVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL---DKIIKFNE 166
             I+  + + G  K  PIQ  +    + G+D IG ++TG+GKTLAF +P L   D  +   E
Sbjct:    95 IMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYE 154

Query:   167 KHGRGR--NPLCLVLAPTRELAKQVEKEFHE-SAPSLDTICVYGGTPISHQMRALDYGVD 223
             K+   +  +P  LVL+PTRELA+Q+E E  + S     ++C+YGG     Q+ A   GV+
Sbjct:   155 KNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEACRGGVE 214

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
              V+ TPGR+ DL     ++L+ V +VVLDEAD+ML +GF   +  IL  +  +R   + S
Sbjct:   215 IVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTS 274

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIS-LYSIAT--SMYEKP-SIIGQLIT 339
             AT P  +R LT+KY K  +   + G  D      ++  +      S + +   I+  L  
Sbjct:   275 ATWPEGVRKLTDKYTKEAVMA-VNGSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFLTA 333

Query:   340 EHAKGGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILI 398
              H +  K I+F ++K  AD L+     K  N + LHG  SQS RE +L+  R G   IL+
Sbjct:   334 AHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILV 393

Query:   399 ATDVAARGLD 408
             ATD+A+RG+D
Sbjct:   394 ATDLASRGID 403


>RGD|1304909 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
            IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
            Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
            UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
        Length = 929

 Score = 455 (165.2 bits), Expect = 4.2e-42, P = 4.2e-42
 Identities = 109/314 (34%), Positives = 171/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSGPSKWNWLT 489

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +  F+    
Sbjct:   490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDI 549

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   550 PVLVATDVAARGLD 563


>UNIPROTKB|E1BJD2 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
            Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
        Length = 946

 Score = 455 (165.2 bits), Expect = 4.4e-42, P = 4.4e-42
 Identities = 110/314 (35%), Positives = 172/314 (54%)

Query:    98 GLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 157
             G   +     + ++  + +   ++  PIQ   +  A+ GRDMIG A+TG+GKT AF  P+
Sbjct:   252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311

Query:   158 LDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGGTPISHQM 215
             L  I+   E    G  P+ +++ PTREL +Q+  E      A +L ++ VYGG  +  Q 
Sbjct:   312 LIHIMDQKELEP-GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query:   216 RALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQ 275
             +AL  G + VV TPGR+ID +K+ A NL  V ++V DEAD+M  +GF   V  I   +  
Sbjct:   371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430

Query:   276 NRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIG 335
             +RQ+++FSAT    I  L    L +P+ V + GD  +   D   +  I  S   K + + 
Sbjct:   431 DRQTLLFSATFRKKIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEILHSG-SKWNWLT 488

Query:   336 QLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRF 394
             + + E    G  ++F   K +A+ LA+ + +  +N   LHGD+ QS+R + +S F+    
Sbjct:   489 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDI 548

Query:   395 NILIATDVAARGLD 408
              +L+ATDVAARGLD
Sbjct:   549 PVLVATDVAARGLD 562


>UNIPROTKB|F1MYC6 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
            GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
            OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
            EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
            Uniprot:F1MYC6
        Length = 729

 Score = 450 (163.5 bits), Expect = 5.4e-42, P = 5.4e-42
 Identities = 124/415 (29%), Positives = 218/415 (52%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P + + SI + H Q+ ++    D +  + S  D     L   + ++ Q +   +A+ G +
Sbjct:   253 PPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYT 311

Query:   121 KLFPIQKAVLEPAMQG-RDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRN---PLC 176
             KL P+QK  + P +QG RD++  A+TG+GKT AF +PIL  +++      R +    P C
Sbjct:   312 KLTPVQKYSI-PIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPEC 370

Query:   177 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVID 234
             +++APTREL  Q+  E  + +    +  + +YGGT + H +R +  G + +  TPGR++D
Sbjct:   371 IIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMD 430

Query:   235 LIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--QNRQSMMFSATMPPWI 290
             +I +  + L +V+++VLDEAD+ML +GF  +++ ++    +P  + RQ++MFSAT P  I
Sbjct:   431 VIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEI 490

Query:   291 RSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVF 350
             + L  ++LK+      VG       D +    +    Y K   + +++  +    + +VF
Sbjct:   491 QRLAGEFLKSNYLFVAVGQVGGACRD-VQQTILQVGQYSKREKLVEIL-RNIGDERTMVF 548

Query:   351 TQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLDX 409
              +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+  +L+AT VAARGLD 
Sbjct:   549 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 608

Query:   410 XXXXXXXXXXXXXXXXQFLSTQISRPGK----SRVLSEMLDADLLSSQGSPLKEV 460
                             +++  +I R G+     R +S   D +  S    PL +V
Sbjct:   609 ENVQHVINFDLPSTIDEYVH-RIGRTGRCGNTGRAIS-FFDLESDSQLAQPLVKV 661


>UNIPROTKB|Q5W5U4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
            IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
            ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
            GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
            OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
        Length = 729

 Score = 450 (163.5 bits), Expect = 5.4e-42, P = 5.4e-42
 Identities = 124/415 (29%), Positives = 218/415 (52%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P + + SI + H Q+ ++    D +  + S  D     L   + ++ Q +   +A+ G +
Sbjct:   253 PPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYT 311

Query:   121 KLFPIQKAVLEPAMQG-RDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRN---PLC 176
             KL P+QK  + P +QG RD++  A+TG+GKT AF +PIL  +++      R +    P C
Sbjct:   312 KLTPVQKYSI-PIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPEC 370

Query:   177 LVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVID 234
             +++APTREL  Q+  E  + +    +  + +YGGT + H +R +  G + +  TPGR++D
Sbjct:   371 IIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMD 430

Query:   235 LIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--QNRQSMMFSATMPPWI 290
             +I +  + L +V+++VLDEAD+ML +GF  +++ ++    +P  + RQ++MFSAT P  I
Sbjct:   431 VIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEI 490

Query:   291 RSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVF 350
             + L  ++LK+      VG       D +    +    Y K   + +++  +    + +VF
Sbjct:   491 QRLAGEFLKSNYLFVAVGQVGGACRD-VQQTILQVGQYSKREKLVEIL-RNIGDERTMVF 548

Query:   351 TQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLDX 409
              +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+  +L+AT VAARGLD 
Sbjct:   549 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 608

Query:   410 XXXXXXXXXXXXXXXXQFLSTQISRPGK----SRVLSEMLDADLLSSQGSPLKEV 460
                             +++  +I R G+     R +S   D +  S    PL +V
Sbjct:   609 ENVQHVINFDLPSTIDEYVH-RIGRTGRCGNTGRAIS-FFDLESDSQLAQPLVKV 661


>UNIPROTKB|Q6GWX0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
            ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
            KEGG:ssc:431672 Uniprot:Q6GWX0
        Length = 722

 Score = 449 (163.1 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 111/358 (31%), Positives = 197/358 (55%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P + + SI + H Q+ ++    D +  + S  D     L   + ++ Q +   +A+ G +
Sbjct:   249 PPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYT 307

Query:   121 KLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRN---PLCL 177
             KL P+QK  +   + GRD++  A+TG+GKT AF +PIL  ++       R +    P C+
Sbjct:   308 KLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECI 367

Query:   178 VLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDL 235
             ++APTREL  Q+  E  + +    +  + +YGGT + H +R +  G + +  TPGR++D+
Sbjct:   368 IVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDI 427

Query:   236 IKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--QNRQSMMFSATMPPWIR 291
             I +  + L +++++VLDEAD+ML +GF  +++ ++    +P  + RQ++MFSAT P  I+
Sbjct:   428 IGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQ 487

Query:   292 SLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFT 351
              L  ++LK+      VG       D +    +    Y K   + +++  +    + +VF 
Sbjct:   488 RLAAEFLKSNYLFVAVGQVGGACRD-VQQADLQVGQYSKREKLLEIL-RNIGDERTMVFV 545

Query:   352 QTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+  +L+AT VAARGLD
Sbjct:   546 ETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLD 603


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 449 (163.1 bits), Expect = 6.7e-42, P = 6.7e-42
 Identities = 117/373 (31%), Positives = 203/373 (54%)

Query:    54 RFSAGTREFHAISRPLDFKSSIAWQHAQSAVDDYVAYDDSSKD-EGLDI-------SKLD 105
             R   G R  + I  P   + S  ++H Q+ ++ +  YDD   +  G D+        + +
Sbjct:   235 RSEQGPRVTY-IPPPPPAEESDIFKHYQTGIN-FDKYDDIVVEVSGSDVPPAILTFEEAN 292

Query:   106 ISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-IKF 164
             +   +   + + G  KL PIQK  +   + GRD++  A+TG+GKT AF +PIL  + +K 
Sbjct:   293 LCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKG 352

Query:   165 NEKHGRG--RNPLCLVLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDY 220
              E       + P  +++APTREL  Q+  +  + +    +  + +YGGT + H ++ +  
Sbjct:   353 VESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISE 412

Query:   221 GVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LP--QN 276
             G + +  TPGR++D+I++  + L++++++VLDEAD+ML +GF ED+E +L+   +P  + 
Sbjct:   413 GCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEE 472

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ++MFSAT P  I+SL  + LK      +VG      +D +    I    + K   + +
Sbjct:   473 RQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSD-VEQMVIEVDEFGKKDKLME 531

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 395
             ++ E     + +VF +TK+ AD +A  + +       +HGD  Q +RE  L  FR G+  
Sbjct:   532 ILQEIGSE-RTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCP 590

Query:   396 ILIATDVAARGLD 408
             +++AT VAARGLD
Sbjct:   591 VIVATSVAARGLD 603


>DICTYBASE|DDB_G0281711 [details] [associations]
            symbol:ddx27 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
            EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
            STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
            KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
        Length = 783

 Score = 450 (163.5 bits), Expect = 7.9e-42, P = 7.9e-42
 Identities = 107/313 (34%), Positives = 179/313 (57%)

Query:   103 KLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKII 162
             +L +S+ ++ A+ + G S+  PIQ   +  A+ G+D++  A TG+GKT AF +P+L++++
Sbjct:   194 ELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLL 253

Query:   163 KFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP-SLDTIC-VYGGTPISHQMRALDY 220
              F +   R      L+L PTRELA Q +      A  S  T C + GG     Q   L  
Sbjct:   254 -FRDSEYRAIR--VLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRK 310

Query:   221 GVDAVVGTPGRVID-LIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQS 279
               D V+ TPGR+ID L+  + + L +++ ++LDEAD++L +GF +++  I+E  P NRQ+
Sbjct:   311 SPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQT 370

Query:   280 MMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATS---MYEKPSIIGQ 336
             M+FSAT+   +++L    L+ P+ V +  D+  ++   +    +      + ++P+I+  
Sbjct:   371 MLFSATLNDEVKTLAKLSLQQPIRVQV--DALMQVTSTLEQEFVKIKPQHLSDRPAILLS 428

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFN 395
             L T     G  I+F ++K++  RL      S      LHG++SQ QR  +L  FRDG+ N
Sbjct:   429 LCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVN 488

Query:   396 ILIATDVAARGLD 408
              L+A+DVA+RGLD
Sbjct:   489 YLLASDVASRGLD 501


>ZFIN|ZDB-GENE-050208-665 [details] [associations]
            symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
            IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
            Uniprot:F1R8P9
        Length = 584

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 97/290 (33%), Positives = 164/290 (56%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTR 183
             P+Q  ++   + GRD+I  A TG+GKT+AF +P++ + ++   +      P CL+L PTR
Sbjct:   195 PVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRALQ--SESASPSCPACLILTPTR 252

Query:   184 ELAKQVE---KEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNA 240
             ELA Q+E   KE     P++ T  + GG P+  Q+  L + +  V+GTPGR+++++K+ A
Sbjct:   253 ELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKA 312

Query:   241 LNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKN 300
             + L  V+ VV+DEAD ML +GF + V  ILE++P++ Q+++ SAT+P   + L  +   +
Sbjct:   313 VQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAERLTHD 372

Query:   301 PLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRL 360
             P+T+  +G  +Q  A+   +        +K  +   L  E       +VF   K  AD L
Sbjct:   373 PVTIT-IGQKNQPCANVRQIVLWVEEPSKKKKLFEILNDEKLYQPPVVVFVDCKLGADLL 431

Query:   361 AHAMAK--SYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               A+ K  S N   +H D  Q +R + +    +G+F+++I+T +  RGLD
Sbjct:   432 CEAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLD 481


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 445 (161.7 bits), Expect = 8.8e-42, P = 8.8e-42
 Identities = 116/306 (37%), Positives = 170/306 (55%)

Query:   124 PIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKI-----------IKFNEKHGRGR 172
             P+QK  +    + RD++  A+TG+GKT AF +PIL +I           +K + ++GR +
Sbjct:   205 PVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRK 264

Query:   173 N-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV-YGGTPISHQMRALDYGVDAVVGTP 229
               P+ LVLAPTRELA Q+ +E  + S  S    CV YGG  I  Q+R L+ G   +V TP
Sbjct:   265 QYPISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATP 324

Query:   230 GRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILER--LPQN--RQSMMFSAT 285
             GR++D+++R  + L   +++VLDEAD+ML +GF   +  I+E+  +P    R +MMFSAT
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSAT 384

Query:   286 MPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAK 343
              P  I+ L   +L     L V  VG + + +   +     A    +K S +  L+     
Sbjct:   385 FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEA----DKRSFLLDLLNATGT 440

Query:   344 GGKCIVFTQTKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDV 402
                 +VF +TK+ AD L   +  + Y C  +HGD SQ  RE  L  FR G+  IL+AT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   403 AARGLD 408
             AARGLD
Sbjct:   501 AARGLD 506


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 444 (161.4 bits), Expect = 9.9e-42, P = 9.9e-42
 Identities = 117/330 (35%), Positives = 181/330 (54%)

Query:   100 DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILD 159
             + S +++ + I+  +     ++  P+QK  +    + RD++  A+TG+G T AF +PIL 
Sbjct:   174 NFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILS 233

Query:   160 KI-----------IKFNEKHGRGRN-PLCLVLAPTRELAKQVEKEFHE-SAPSLDTICV- 205
             +I           +K N ++GR +  P+ LVLAPTRELA Q+ +E  + S  S    CV 
Sbjct:   234 QIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 293

Query:   206 YGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAED 265
             YGG     Q+R L+ G   +V TPGR++D+++R  + L   +++VLDEAD+ML +GF   
Sbjct:   294 YGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 353

Query:   266 VEVILER--LPQN--RQSMMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGIS 319
             +  I+E+  +P    R +MMFSAT P  I+ L   +L     L V  VG + + +   + 
Sbjct:   354 IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV- 412

Query:   320 LYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDIS 378
                +     +K S +  L+    +    +VF +TK+ AD L + + +  Y C  +HGD S
Sbjct:   413 ---VWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRS 469

Query:   379 QSQRERTLSAFRDGRFNILIATDVAARGLD 408
             Q  RE  L  FR GR  IL+AT VAARGLD
Sbjct:   470 QKDREEALHQFRSGRKPILVATAVAARGLD 499


>UNIPROTKB|Q8EE19 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 100/313 (31%), Positives = 171/313 (54%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S+L +   +V A+   G     PIQ   +   + G++++  A+TGTGKT +F +P+L
Sbjct:     1 MPFSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMR 216
              +    +    R +    ++L PTRELA QVE+  ++ A    L  + +YGG   + Q +
Sbjct:    61 HRFA--DAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKK 118

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD +V TPGR++D+  + A+   EV  +VLDEAD+ML +GF ED+  I+E+LP+ 
Sbjct:   119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQ 178

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ+++FSAT+   +++L    + + + +++        +  I  +        K +++  
Sbjct:   179 RQNLLFSATLSKQVKALAKTAIPDAIEIEI--SRKNAASTQIDQWLTTVDKDRKSALLSH 236

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LI E+    + ++F QTK  A +L   + K     E  H   SQ+ RE+ L  F+ G+  
Sbjct:   237 LIKEN-NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVP 295

Query:   396 ILIATDVAARGLD 408
              L+AT V +RG+D
Sbjct:   296 FLVATGVVSRGID 308


>TIGR_CMR|SO_2571 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 100/313 (31%), Positives = 171/313 (54%)

Query:    99 LDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL 158
             +  S+L +   +V A+   G     PIQ   +   + G++++  A+TGTGKT +F +P+L
Sbjct:     1 MPFSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60

Query:   159 DKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMR 216
              +    +    R +    ++L PTRELA QVE+  ++ A    L  + +YGG   + Q +
Sbjct:    61 HRFA--DAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKK 118

Query:   217 ALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQN 276
              L  GVD +V TPGR++D+  + A+   EV  +VLDEAD+ML +GF ED+  I+E+LP+ 
Sbjct:   119 RLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQ 178

Query:   277 RQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQ 336
             RQ+++FSAT+   +++L    + + + +++        +  I  +        K +++  
Sbjct:   179 RQNLLFSATLSKQVKALAKTAIPDAIEIEI--SRKNAASTQIDQWLTTVDKDRKSALLSH 236

Query:   337 LITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTLSAFRDGRFN 395
             LI E+    + ++F QTK  A +L   + K     E  H   SQ+ RE+ L  F+ G+  
Sbjct:   237 LIKEN-NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVP 295

Query:   396 ILIATDVAARGLD 408
              L+AT V +RG+D
Sbjct:   296 FLVATGVVSRGID 308


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 442 (160.7 bits), Expect = 1.2e-41, P = 1.2e-41
 Identities = 115/312 (36%), Positives = 172/312 (55%)

Query:   118 GISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIL----DK---IIKFNEKHGR 170
             G ++  P+QK  +     GRD++  A+TG+GKT  F  PIL    DK    +  ++  G 
Sbjct:   188 GYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGM 247

Query:   171 GRNP-----LCLVLAPTRELAKQVEKEFHESA-PSLDTIC-VYGGTPISHQMRALDYGVD 223
             G  P       L+LAPTREL  Q+ +E  +    S    C VYGG  I  Q+R +D G D
Sbjct:   248 GYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCD 307

Query:   224 AVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLP----QNRQS 279
              +  TPGR++DLI R  ++L+ ++F+VLDEAD+ML +GF   +  I+E       + RQ+
Sbjct:   308 LLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQT 367

Query:   280 MMFSATMPPWIRSLTNKYLKNP--LTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQL 337
             +MFSAT P  I+ L   +LK+   L+V  VG + + +   +    +     EK S +  +
Sbjct:   368 LMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKV----VHVEDSEKRSYLLDI 423

Query:   338 ITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNI 396
             +      G  ++F +TKR AD L   +  S +    +HGD +Q +RER L  FR GR +I
Sbjct:   424 LHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSI 483

Query:   397 LIATDVAARGLD 408
             ++AT VA+RGLD
Sbjct:   484 MVATAVASRGLD 495


>ZFIN|ZDB-GENE-031001-8 [details] [associations]
            symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
            RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
            PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
            NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
        Length = 776

 Score = 448 (162.8 bits), Expect = 1.2e-41, P = 1.2e-41
 Identities = 119/368 (32%), Positives = 197/368 (53%)

Query:    48 DDIIKSRFSAGTREFHAISRPLDFKSSIAWQHAQSAVDDYVAYDDSSK-DEGLDISKLDI 106
             DD  +  FS+   E    +  L  K     +      + +  ++D+S+ DE L    +++
Sbjct:   151 DDDDEDEFSSADEEVLKKADTLREKQKKGKRKMADTTEGF--FEDASQYDENLTFHDMNL 208

Query:   107 SQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE 166
             S+ ++ A++  G  +  PIQKA +   + G+D+   A TGTGKT AF +P+L+++I    
Sbjct:   209 SRPLLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVLERLIY--- 265

Query:   167 KHGRGRNPLCLVLAPTRELAKQVEKEFHESAP--SLDTICVYGGTPISHQMRALDYGVDA 224
             K    +    LVL PTREL  QV     + A   ++ T    GG  +  Q  AL  G D 
Sbjct:   266 KPRETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEAALRAGPDV 325

Query:   225 VVGTPGRVIDLIKRN-ALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFS 283
             ++ TPGR+ID +    +  LS+++ ++LDEAD+ML   F E ++ I+      RQ+M+FS
Sbjct:   326 LIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRMCAYQRQTMLFS 385

Query:   284 ATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMY-EKPSIIGQLITEHA 342
             ATM   ++ L +  LK P+ + +  ++D           I  +   ++ +I+  L+T   
Sbjct:   386 ATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALLTRTF 445

Query:   343 KGGKCIVFTQTKRDADRLAHAMAKSYNCE--PLHGDISQSQRERTLSAFRDGRFNILIAT 400
             +    ++FTQTK+ A R+ H +      +   LHG++SQ+QR  +L  F+D + +IL+AT
Sbjct:   446 QD-HVMLFTQTKKQAHRM-HILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVAT 503

Query:   401 DVAARGLD 408
             DVAARGLD
Sbjct:   504 DVAARGLD 511


>UNIPROTKB|G3N2S5 [details] [associations]
            symbol:Bt.75622 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 EMBL:DAAA02039547
            Ensembl:ENSBTAT00000065964 Uniprot:G3N2S5
        Length = 546

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 116/351 (33%), Positives = 181/351 (51%)

Query:    67 RPLDFKSSIAWQHAQSAVDDYVAYDDSSKDEGLDISKLDISQDIVAALARRGISKLFPIQ 126
             +P   +   A +  +  +   V    + K EG   S   IS++ V  L  +G++ LFPIQ
Sbjct:     4 KPKSHQIEEAAEEKEEMISPKVKKVKNKKKEGA-FSNFPISEETVKLLKAQGVTFLFPIQ 62

Query:   127 KAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELA 186
                      G+D+I +A  GT KT +F  P+++K+    +   RG  P  LVL P RELA
Sbjct:    63 AKTFHQVYSGKDLISQAWAGTRKTFSFAFPLVEKLQGDLQDRKRGGTPQVLVLEP-RELA 121

Query:   187 KQVEKEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVID---LIKRNALNL 243
              QV ++F +    L T C YGGT    Q+  +  G D ++GT GR+ D   +++   L+L
Sbjct:   122 SQVSRDFSDITKKLTTACFYGGTSYRGQIECMRNGTDILIGTSGRIKDHLPVLQNGKLDL 181

Query:   244 SEVQFVVLDEADQMLSVGFAEDVEVILERL-----PQNRQSMMFSATMPPWIRSLTNKYL 298
             ++++ VVLD  DQML  GFA+ V+ IL          N +   FSAT   W+ ++  KY+
Sbjct:   182 TKLKHVVLD-VDQMLDKGFADQVKEILSMACKNDSEDNLKHYFFSATCFHWLCNVAKKYM 240

Query:   299 KNPLT-VDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQTKRDA 357
             K+    +DL+    QK+A  +   +I      K ++IG    +    G  IVF + K++ 
Sbjct:   241 KSAYEQMDLM----QKMAITVEHLAIKCHRTRKAAVIG----DSGFQGPTIVFCEMKKET 292

Query:   358 DRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
               L+  +A  Y+ + LH    + QR+ T   FR+G F + + T+VAARGLD
Sbjct:   293 QELSQNVAVRYDAQSLH----RKQRQITRKGFRNGDFGVWVPTNVAARGLD 339


>WB|WBGene00022029 [details] [associations]
            symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0018996 "molting cycle, collagen and
            cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
            cell development" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
            GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
            GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
            RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
            STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
            KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
            InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
        Length = 399

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 109/331 (32%), Positives = 176/331 (53%)

Query:    85 DDYVAYD-DSSKDEGL--DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIG 141
             DD    + +SS++  +     K+ + +D++  +   G  K   IQ+  +   ++ RD+I 
Sbjct:     9 DDMATVEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIA 68

Query:   142 RARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD 201
             +A++GTGKT  F I +L  +        + R    L+L+PTRELA Q++K        ++
Sbjct:    69 QAQSGTGKTATFSISVLQSL------DTQVRETQALILSPTRELAVQIQKVVLALGDYMN 122

Query:   202 TIC--VYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLS 259
               C    GGT +   +R LDYG   V GTPGRV D+I+R  L    ++ +VLDEAD+ML+
Sbjct:   123 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182

Query:   260 VGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIS 319
              GF E +  I   LP   Q ++ SAT+P  I  +T+K++ +P+ + LV   D+   +GI 
Sbjct:   183 KGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI-LV-KRDELTLEGIK 240

Query:   320 LYSIATSMYE-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDI 377
              + +A    E K   +  L  +     + ++F  T+R  D L   M ++ +    +HGD+
Sbjct:   241 QFFVAVDREEWKFDTLIDLY-DTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDM 299

Query:   378 SQSQRERTLSAFRDGRFNILIATDVAARGLD 408
              Q  R+  +  FR G   +LI+TDV ARGLD
Sbjct:   300 EQKDRDEVMKEFRAGTTRVLISTDVWARGLD 330


>UNIPROTKB|Q96GQ7 [details] [associations]
            symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
            EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
            EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
            EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
            EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
            UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
            MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
            SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
            DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
            UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
            neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
            OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
            NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
            Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
        Length = 796

 Score = 448 (162.8 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 113/326 (34%), Positives = 183/326 (56%)

Query:    90 YDDSSK-DEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTG 148
             ++D+S+ DE L    +++S+ ++ A+   G  +  PIQKA +   + G+D+   A TGTG
Sbjct:   208 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTG 267

Query:   149 KTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TICV-Y 206
             KT AF +P+L+++I    K  +      LVL PTREL  QV     + A   + T C+  
Sbjct:   268 KTAAFALPVLERLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAV 324

Query:   207 GGTPISHQMRALDYGVDAVVGTPGRVIDLIKR-NALNLSEVQFVVLDEADQMLSVGFAED 265
             GG  +  Q  AL    D ++ TPGR+ID +    + +LS ++ ++LDEAD+ML   F E 
Sbjct:   325 GGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 384

Query:   266 VEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT 325
             ++ I+     +RQ+M+FSATM   ++ L +  LKNP+ + +  ++D           I  
Sbjct:   385 MKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRP 444

Query:   326 SMY-EKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKSYNCE--PLHGDISQSQR 382
             +   ++ +I+  L+T        ++FTQTK+ A R+ H +      +   LHG++SQ+QR
Sbjct:   445 NREGDREAIVAALLTRTFTD-HVMLFTQTKKQAHRM-HILLGLMGLQVGELHGNLSQTQR 502

Query:   383 ERTLSAFRDGRFNILIATDVAARGLD 408
                L  F+D + +IL+ATDVAARGLD
Sbjct:   503 LEALRRFKDEQIDILVATDVAARGLD 528


>UNIPROTKB|F1Q073 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
            Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
        Length = 767

 Score = 447 (162.4 bits), Expect = 1.5e-41, P = 1.5e-41
 Identities = 113/326 (34%), Positives = 183/326 (56%)

Query:    90 YDDSSK-DEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTG 148
             ++D+S+ DE L    +++S+ ++ A+   G  +  PIQKA +   + G+D+   A TGTG
Sbjct:   177 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTG 236

Query:   149 KTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TICV-Y 206
             KT AF +P+L+++I    K  +      LVL PTREL  QV     + A   + T C+  
Sbjct:   237 KTAAFALPVLERLIY---KPRQSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAV 293

Query:   207 GGTPISHQMRALDYGVDAVVGTPGRVIDLIKR-NALNLSEVQFVVLDEADQMLSVGFAED 265
             GG  +  Q  AL    D ++ TPGR+ID +    + +LS ++ ++LDEAD+ML   F E 
Sbjct:   294 GGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353

Query:   266 VEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT 325
             ++ I+     +RQ+M+FSATM   ++ L +  LKNP+ + +  ++D           I  
Sbjct:   354 MKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRP 413

Query:   326 SMY-EKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKSYNCE--PLHGDISQSQR 382
             +   ++ +I+  L+T        ++FTQTK+ A R+ H +      +   LHG++SQ+QR
Sbjct:   414 NREGDREAIVAALLTRTFTD-HVMLFTQTKKQAHRM-HILLGLMGLQVGELHGNLSQTQR 471

Query:   383 ERTLSAFRDGRFNILIATDVAARGLD 408
                L  F+D + +IL+ATDVAARGLD
Sbjct:   472 LEALRRFKDEQIDILVATDVAARGLD 497


>UNIPROTKB|J9P9C6 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
            Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
        Length = 788

 Score = 447 (162.4 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 113/326 (34%), Positives = 183/326 (56%)

Query:    90 YDDSSK-DEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTG 148
             ++D+S+ DE L    +++S+ ++ A+   G  +  PIQKA +   + G+D+   A TGTG
Sbjct:   198 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTG 257

Query:   149 KTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD-TICV-Y 206
             KT AF +P+L+++I    K  +      LVL PTREL  QV     + A   + T C+  
Sbjct:   258 KTAAFALPVLERLIY---KPRQSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAV 314

Query:   207 GGTPISHQMRALDYGVDAVVGTPGRVIDLIKR-NALNLSEVQFVVLDEADQMLSVGFAED 265
             GG  +  Q  AL    D ++ TPGR+ID +    + +LS ++ ++LDEAD+ML   F E 
Sbjct:   315 GGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 374

Query:   266 VEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIAT 325
             ++ I+     +RQ+M+FSATM   ++ L +  LKNP+ + +  ++D           I  
Sbjct:   375 MKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRP 434

Query:   326 SMY-EKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKSYNCE--PLHGDISQSQR 382
             +   ++ +I+  L+T        ++FTQTK+ A R+ H +      +   LHG++SQ+QR
Sbjct:   435 NREGDREAIVAALLTRTFTD-HVMLFTQTKKQAHRM-HILLGLMGLQVGELHGNLSQTQR 492

Query:   383 ERTLSAFRDGRFNILIATDVAARGLD 408
                L  F+D + +IL+ATDVAARGLD
Sbjct:   493 LEALRRFKDEQIDILVATDVAARGLD 518


>TAIR|locus:2091191 [details] [associations]
            symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
            hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0035145 "exon-exon junction complex" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
            GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
            EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
            OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
            IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
            ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
            PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
            KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
            PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
            GermOnline:AT3G19760 Uniprot:Q94A52
        Length = 408

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 104/329 (31%), Positives = 177/329 (53%)

Query:    85 DDYVAYDDSSKDEGL-DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRA 143
             DD + ++ +   E +   + + I +D++  +   G  K   IQ+  + P +QGRD+I +A
Sbjct:    20 DDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQA 79

Query:   144 RTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESA--PSLD 201
             ++GTGKT    + +  +++  +      R    L+L+PTRELA Q EK         ++ 
Sbjct:    80 QSGTGKTSMIALSVC-QVVDTSS-----REVQALILSPTRELATQTEKTIQAIGLHANIQ 133

Query:   202 TICVYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLSVG 261
                  GG  +   +R L++GV  V GTPGRV D+IKR +L    ++ ++LDE+D+MLS G
Sbjct:   134 AHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRG 193

Query:   262 FAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLY 321
             F + +  +   LP + Q  + SAT+P  I  +T+K++  P+ + LV   D+   +GI  +
Sbjct:   194 FKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKI-LV-KRDELTLEGIKQF 251

Query:   322 SIATSMYE-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQ 379
              +A    E K   +  L  +     + ++F  TKR  D L+  M + ++    +HGD+ Q
Sbjct:   252 FVAVEKEEWKFDTLCDLY-DTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQ 310

Query:   380 SQRERTLSAFRDGRFNILIATDVAARGLD 408
              +R+  ++ FR G   +LI TDV ARG+D
Sbjct:   311 KERDAIMNEFRSGDSRVLITTDVWARGID 339


>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
            symbol:PFL1310c "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
            ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
            EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
            EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
            Uniprot:Q8I5E7
        Length = 742

 Score = 374 (136.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
 Identities = 82/237 (34%), Positives = 137/237 (57%)

Query:   177 LVLAPTRELAKQV--E-KEFHESAPSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVI 233
             L+L PTREL  QV  E K F ++ P + ++ VYGG P  +Q+  L  G D +V TPGR++
Sbjct:   431 LILLPTRELCLQVLDEIKSFEKNLP-IKSVAVYGGVPKYYQINNLKKGADIIVATPGRLL 489

Query:   234 DLIKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILERLPQNRQSMMFSATMPPWIRSL 293
             D ++   +NL +  +VV+DEAD++L +GF + +  I+ ++ +N+Q +  +AT P  +R L
Sbjct:   490 DFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKL 549

Query:   294 TNKYLK-NPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFTQ 352
                +   +P+ +  +G ++      I    I +S  +    +   + E+ +  K ++F  
Sbjct:   550 AYDFCSYDPVKIQ-IGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYENNKILIFCD 608

Query:   353 TKRDADRLAHAMA-KSYNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             TKR+ D L   +    YN   +HGD  Q +R+R L+ ++  R NIL+ATDVA+RGLD
Sbjct:   609 TKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRGLD 665

 Score = 98 (39.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
 Identities = 21/42 (50%), Positives = 27/42 (64%)

Query:   125 IQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNE 166
             IQK     A+ G+D+IG A TG+GKTLAF +P    I+K  E
Sbjct:   313 IQKITWPIALSGKDLIGVAETGSGKTLAFVLPCFMHILKHKE 354


>UNIPROTKB|D6RDK4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
            UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
            GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
            Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
            Bgee:D6RDK4 Uniprot:D6RDK4
        Length = 704

 Score = 444 (161.4 bits), Expect = 2.0e-41, P = 2.0e-41
 Identities = 110/358 (30%), Positives = 197/358 (55%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P + + SI + H Q+ ++    D +  + S  D     L   + ++ Q +   +A+ G +
Sbjct:   231 PPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYT 289

Query:   121 KLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRN---PLCL 177
             KL P+QK  +   + GRD++  A+TG+GKT AF +PIL  ++       R +    P C+
Sbjct:   290 KLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECI 349

Query:   178 VLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDL 235
             ++APTREL  Q+  E  + +    +  + +YGGT + H +R +  G + +  TPGR++D+
Sbjct:   350 IVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDI 409

Query:   236 IKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--QNRQSMMFSATMPPWIR 291
             I +  + L +++++VLDEAD+ML +GF  +++ ++    +P  + RQ++MFSAT P  I+
Sbjct:   410 IGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQ 469

Query:   292 SLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFT 351
              L  ++LK+      VG       D +    +    + K   + +++  +    + +VF 
Sbjct:   470 RLAAEFLKSNYLFVAVGQVGGACRD-VQQTVLQVGQFSKREKLVEIL-RNIGDERTMVFV 527

Query:   352 QTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+  +L+AT VAARGLD
Sbjct:   528 ETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLD 585


>DICTYBASE|DDB_G0280147 [details] [associations]
            symbol:ddx47 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
            GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
            EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
            EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
            Uniprot:Q54VT4
        Length = 546

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 111/322 (34%), Positives = 174/322 (54%)

Query:    91 DDSSKDEGLDISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIGRARTGTGKT 150
             ++  K E +    L +   I+ A  + G +K   IQ+  +  A++GRD+IG A+TG+GKT
Sbjct:   111 EEEKKYENVTFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKT 170

Query:   151 LAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHE--SAPSLDTICVYGG 208
              AF IP+L K+++  +  G      CL LAPTRELA Q+  +F+   S   + T  + GG
Sbjct:   171 AAFVIPVLQKLLEAPQ--GL----FCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGG 224

Query:   209 TPISHQMRALDYGVDAVVGTPGRVIDLIKRN-ALNLSEVQFVVLDEADQMLSVGFAEDVE 267
                  Q  AL      VVG+PGRV+  ++     NL  +++ ++DEAD++ S  F E+V 
Sbjct:   225 IDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVN 284

Query:   268 VILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSM 327
              IL+ +P+ R + +FSATM   +  L    L NP+ V  V    Q +   +  Y      
Sbjct:   285 NILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKVQ-VASKYQTVDTLLQQYLFVPFK 343

Query:   328 YEKPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAK-SYNCEPLHGDISQSQRERTL 386
             Y K   +  ++ E A G   I+FT T   + ++A  +    +   P++GD+ Q +R  +L
Sbjct:   344 Y-KDCYLAYILNELA-GNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASL 401

Query:   387 SAFRDGRFNILIATDVAARGLD 408
             + F+ G  +IL+ATDVAARGLD
Sbjct:   402 NKFKQGTKSILVATDVAARGLD 423


>WB|WBGene00018007 [details] [associations]
            symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
            "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018996 "molting
            cycle, collagen and cuticulin-based cuticle" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
            GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
            EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
            ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
            MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
            EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
            KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
            WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
        Length = 399

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 109/331 (32%), Positives = 176/331 (53%)

Query:    85 DDYVAYD-DSSKDEGL--DISKLDISQDIVAALARRGISKLFPIQKAVLEPAMQGRDMIG 141
             DD    + +SS++  +     K+ + +D++  +   G  K   IQ+  +   ++ RD+I 
Sbjct:     9 DDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIA 68

Query:   142 RARTGTGKTLAFGIPILDKIIKFNEKHGRGRNPLCLVLAPTRELAKQVEKEFHESAPSLD 201
             +A++GTGKT  F I +L  +        + R    L+L+PTRELA Q++K        ++
Sbjct:    69 QAQSGTGKTATFSISVLQSL------DTQVRETQALILSPTRELAVQIQKVVLALGDYMN 122

Query:   202 TIC--VYGGTPISHQMRALDYGVDAVVGTPGRVIDLIKRNALNLSEVQFVVLDEADQMLS 259
               C    GGT +   +R LDYG   V GTPGRV D+I+R  L    ++ +VLDEAD+ML+
Sbjct:   123 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182

Query:   260 VGFAEDVEVILERLPQNRQSMMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGIS 319
              GF E +  I   LP   Q ++ SAT+P  I  +T+K++ +P+ + LV   D+   +GI 
Sbjct:   183 KGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI-LV-KRDELTLEGIK 240

Query:   320 LYSIATSMYE-KPSIIGQLITEHAKGGKCIVFTQTKRDADRLAHAMAKS-YNCEPLHGDI 377
              + +A    E K   +  L  +     + ++F  T+R  D L   M ++ +    +HGD+
Sbjct:   241 QFFVAVDREEWKFDTLIDLY-DTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDM 299

Query:   378 SQSQRERTLSAFRDGRFNILIATDVAARGLD 408
              Q  R+  +  FR G   +LI+TDV ARGLD
Sbjct:   300 EQKDRDEVMKEFRAGTTRVLISTDVWARGLD 330


>UNIPROTKB|Q9NQI0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
            localization" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
            [GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
            EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
            IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
            RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
            ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
            PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
            PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
            Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
            KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
            GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
            HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
            InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
            NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
            Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
            Uniprot:Q9NQI0
        Length = 724

 Score = 444 (161.4 bits), Expect = 2.4e-41, P = 2.4e-41
 Identities = 110/358 (30%), Positives = 197/358 (55%)

Query:    68 PLDFKSSIAWQHAQSAVD----DYVAYDDSSKDEG---LDISKLDISQDIVAALARRGIS 120
             P + + SI + H Q+ ++    D +  + S  D     L   + ++ Q +   +A+ G +
Sbjct:   251 PPEDEDSI-FAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYT 309

Query:   121 KLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNEKHGRGRN---PLCL 177
             KL P+QK  +   + GRD++  A+TG+GKT AF +PIL  ++       R +    P C+
Sbjct:   310 KLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECI 369

Query:   178 VLAPTRELAKQVEKEFHESA--PSLDTICVYGGTPISHQMRALDYGVDAVVGTPGRVIDL 235
             ++APTREL  Q+  E  + +    +  + +YGGT + H +R +  G + +  TPGR++D+
Sbjct:   370 IVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDI 429

Query:   236 IKRNALNLSEVQFVVLDEADQMLSVGFAEDVEVILE--RLP--QNRQSMMFSATMPPWIR 291
             I +  + L +++++VLDEAD+ML +GF  +++ ++    +P  + RQ++MFSAT P  I+
Sbjct:   430 IGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQ 489

Query:   292 SLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLITEHAKGGKCIVFT 351
              L  ++LK+      VG       D +    +    + K   + +++  +    + +VF 
Sbjct:   490 RLAAEFLKSNYLFVAVGQVGGACRD-VQQTVLQVGQFSKREKLVEIL-RNIGDERTMVFV 547

Query:   352 QTKRDADRLAHAMAKS-YNCEPLHGDISQSQRERTLSAFRDGRFNILIATDVAARGLD 408
             +TK+ AD +A  + +   +   +HGD  Q +RE+ L  FR G+  +L+AT VAARGLD
Sbjct:   548 ETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLD 605

WARNING:  HSPs involving 609 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      475       458   0.00095  118 3  11 22  0.39    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  859
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  241 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.27u 0.09s 35.36t   Elapsed:  00:00:02
  Total cpu time:  35.32u 0.09s 35.41t   Elapsed:  00:00:02
  Start:  Mon May 20 20:58:17 2013   End:  Mon May 20 20:58:19 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with PMH2 PMH2 PMH2 putative mitochondrial RNA helicase 2	protein from Arabidopsis thaliana	1.2e-143
BLAST match view associations BLAST with PMH1 PMH1 PMH1 putative mitochondrial RNA helicase 1	protein from Arabidopsis thaliana	7.0e-143
BLAST match view associations BLAST with emb1138 emb1138 emb1138 AT5G26742	protein from Arabidopsis thaliana	3.9e-99
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Gallus gallus	2.8e-66
BLAST match view associations BLAST with ddx21 ddx21 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	gene_product from Danio rerio	1.1e-64
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein from Mus musculus	2.9e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	3.7e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Canis lupus familiaris	3.7e-64
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	3.7e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Bos taurus	4.7e-64
BLAST match view associations BLAST with Ddx50 Ddx50 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein from Mus musculus	4.7e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 Uncharacterized protein	protein from Sus scrofa	6.0e-64
BLAST match view associations BLAST with DDX50 DDX50 DDX50 ATP-dependent RNA helicase DDX50	protein from Homo sapiens	7.6e-64
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Nucleolar RNA helicase 2	protein from Homo sapiens	1.2e-63
BLAST match view associations BLAST with PRH75 PRH75 PRH75	protein from Arabidopsis thaliana	2.0e-63
BLAST match view associations BLAST with DDX21 DDX21 DDX21 DDX21 protein	protein from Bos taurus	3.3e-63
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Sus scrofa	4.2e-63
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	gene from Plasmodium falciparum	5.4e-62
BLAST match view associations BLAST with PFE0215w PFE0215w PFE0215w ATP-dependent helicase, putative	protein from Plasmodium falciparum 3D7	5.4e-62
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-61
BLAST match view associations BLAST with DDX21 DDX21 DDX21 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-61
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	5.1e-58
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	5.1e-58
BLAST match view associations BLAST with SO_4034 SO_4034 SO_4034 ATP-dependent RNA helicase DeaD	protein from Shewanella oneidensis MR-1	2.0e-56
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	3.3e-56
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A	protein from Pseudomonas protegens Pf-5	1.9e-53
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	1.9e-53
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	1.0e-52
BLAST match view associations BLAST with STRS1 STRS1 STRS1 STRESS RESPONSE SUPPRESSOR 1	protein from Arabidopsis thaliana	1.3e-52
BLAST match view associations BLAST with RVBD_3211 RVBD_3211 RVBD_3211 ATP-dependent RNA helicase rhlE	protein from Mycobacterium tuberculosis H37Rv	2.1e-52
BLAST match view associations BLAST with BAS2301 BAS2301 BAS2301 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	2.1e-52
BLAST match view associations BLAST with BA_2475 BA_2475 BA_2475 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	2.1e-52
BLAST match view associations BLAST with CPS_1125 CPS_1125 CPS_1125 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.1e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	2.7e-52
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	2.7e-52
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	2.7e-52
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	2.7e-52
BLAST match view associations BLAST with deaD deaD deaD Cold-shock DEAD box protein A homolog	protein from Mycobacterium tuberculosis	5.6e-52
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	1.2e-51
BLAST match view associations BLAST with CPS_1726 CPS_1726 CPS_1726 RNA helicase DeaD	protein from Colwellia psychrerythraea 34H	1.5e-51
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	1.9e-51
BLAST match view associations BLAST with SO_3125 SO_3125 SO_3125 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.9e-51
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	3.1e-51
BLAST match view associations BLAST with deaD deaD deaD DeaD, DEAD-box RNA helicase	protein from Escherichia coli K-12	5.1e-51
BLAST match view associations BLAST with PSPPH_0449 PSPPH_0449 PSPPH_0449 ATP-dependent RNA helicase RhlE, putative	protein from Pseudomonas syringae pv. phaseolicola 1448A	5.1e-51
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	6.5e-51
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	1.1e-50
BLAST match view associations BLAST with rhlE_2 rhlE_2 rhlE_2 Putative ATP-dependent RNA helicase	protein from Pseudomonas protegens Pf-5	1.1e-50
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.3e-50
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	1.3e-50
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	1.7e-50
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	2.8e-50
BLAST match view associations BLAST with CPS_3401 CPS_3401 CPS_3401 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	7.4e-50
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.0e-49
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	1.1e-48
BLAST match view associations BLAST with DET_0183 DET_0183 DET_0183 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Dehalococcoides ethenogenes 195	1.4e-48
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	2.3e-48
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	2.3e-48
BLAST match view associations BLAST with SO_3783 SO_3783 SO_3783 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.3e-48
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with CPS_1418 CPS_1418 CPS_1418 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	2.9e-48
BLAST match view associations BLAST with DBP3 DBP3 DBP3	gene_product from Candida albicans	7.7e-48
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	7.7e-48
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	7.7e-48
BLAST match view associations BLAST with SPO_3833 SPO_3833 SPO_3833 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Ruegeria pomeroyi DSS-3	9.8e-48
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	9.8e-48
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	9.8e-48
BLAST match view associations BLAST with GSU_0522 GSU_0522 GSU_0522 ATP-dependent RNA helicase RhlB	protein from Geobacter sulfurreducens PCA	1.2e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 DDX17 protein	protein from Bos taurus	1.6e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	1.6e-47
BLAST match view associations BLAST with Ddx17 Ddx17 Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein from Mus musculus	1.6e-47
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	1.6e-47
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	2.0e-47
BLAST match view associations BLAST with SO_3388 SO_3388 SO_3388 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.0e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Gallus gallus	2.3e-47
BLAST match view associations BLAST with CG10077 CG10077 CG10077	protein from Drosophila melanogaster	2.5e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.6e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.7e-47
BLAST match view associations BLAST with CG10777 CG10777 CG10777	protein from Drosophila melanogaster	2.9e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	3.0e-47
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Sus scrofa	3.0e-47
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	3.9e-47
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	4.2e-47
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	4.2e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Probable ATP-dependent RNA helicase DDX46	protein from Homo sapiens	4.9e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Bos taurus	4.9e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Canis lupus familiaris	4.9e-47
BLAST match view associations BLAST with DDX46 DDX46 DDX46 Uncharacterized protein	protein from Sus scrofa	4.9e-47
BLAST match view associations BLAST with Ddx46 Ddx46 Ddx46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	protein from Mus musculus	4.9e-47
BLAST match view associations BLAST with Ddx46 Ddx46 Ddx46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	gene from Rattus norvegicus	4.9e-47
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Bos taurus	5.4e-47