BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011920
(475 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4I5V3|EPL1_GIBZE Enhancer of polycomb-like protein 1 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=EPL1 PE=3
SV=2
Length = 590
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 31/155 (20%)
Query: 302 RNAQVSVSKVIPIPGVCEV-LGYEDSNTVPFCRPDSYI--SVNVDEVSRALAKRTANYDM 358
+ A S + IP+P E + Y+D VPF +P SYI S V+E L YDM
Sbjct: 58 KEAGTSNDQEIPVPPPQESDINYDDLYPVPFHKPSSYIRFSQTVEECITCL------YDM 111
Query: 359 DSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAF-----EKAYFCSPDDYSNEEAAV 413
+ED+E+LK++N++ L SED FE I++ F E+ F + D N AA
Sbjct: 112 TTEDDEFLKQYNSKPPATGVL----SEDDFEHIMEVFEDTAAEQTPFAAVD---NTVAAY 164
Query: 414 NLCL----ELGQK------EVVLAVYNHWKQKRKQ 438
++ L L Q + VY +WK +R++
Sbjct: 165 DMMLPGLTHLNQSVSTDVLQHAKPVYEYWKSRRQE 199
>sp|Q52LR7|EPC2_HUMAN Enhancer of polycomb homolog 2 OS=Homo sapiens GN=EPC2 PE=1 SV=2
Length = 807
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 28/142 (19%)
Query: 309 SKVIPIPGVCEVLGYEDS-NTVPFCRPDSYISV---NVDEVSRALAKRTANYDMDSEDEE 364
S VIP+P + Y + F +P +I + N+D +YDMDSEDE
Sbjct: 71 SMVIPVPEAESNVNYYNRLYKGEFKQPKQFIHIQPFNLD-------NEQPDYDMDSEDET 123
Query: 365 WLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKE- 423
L + N + + FE+++D EKA SN+ + L ++
Sbjct: 124 LLNRLNRKM--------EIKPLQFEIMIDRLEKA-------SSNQLVTLQEAKLLLNEDD 168
Query: 424 -VVLAVYNHWKQKRKQKRAALL 444
++ AVY++W +KRK R L
Sbjct: 169 YLIKAVYDYWVRKRKNCRGPSL 190
>sp|Q8C0I4|EPC2_MOUSE Enhancer of polycomb homolog 2 OS=Mus musculus GN=Epc2 PE=2 SV=2
Length = 808
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 28/142 (19%)
Query: 309 SKVIPIPGVCEVLGYEDS-NTVPFCRPDSYISV---NVDEVSRALAKRTANYDMDSEDEE 364
S VIP+P + Y + F +P +I + N+D +YDMDSEDE
Sbjct: 71 SMVIPVPEAESNVNYYNRLYKGEFKQPKQFIHIQPFNLD-------NEQPDYDMDSEDET 123
Query: 365 WLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKE- 423
L + N + + FE+++D EKA SN+ + L ++
Sbjct: 124 LLNRLNRKM--------EIKPLQFEIMIDRLEKA-------SSNQLVTLQEAKLLLNEDD 168
Query: 424 -VVLAVYNHWKQKRKQKRAALL 444
++ AVY++W +KRK R L
Sbjct: 169 YLIKAVYDYWVRKRKNCRGPSL 190
>sp|Q6ZPI0|JADE1_MOUSE Protein Jade-1 OS=Mus musculus GN=Phf17 PE=1 SV=2
Length = 834
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 277 DNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSK-VIPIPGVCEVLGYEDSNTVPFCRPD 335
D+++L N D+ D +++ ++ QV VS IP P V V+ E S + F RP
Sbjct: 61 DSYQL---NPDDYYVLADPWRQEWEKGVQVPVSPGTIPQP-VARVVSEEKS--LMFIRPK 114
Query: 336 SYISVNVDEVS-------RALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTF 388
YI+ + E R LA YD++ D WL+ N EF E + E + E T
Sbjct: 115 KYIASSGSEPPALGYVDIRTLADSVCRYDLNDMDAAWLEVTNEEF-KEMGMPE-LDEYTM 172
Query: 389 ELIVDAFEK 397
E +++ FE+
Sbjct: 173 ERVLEEFEQ 181
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 356 YDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYF 400
YDMD ED WL N + + H VS DTFEL+VD EK +
Sbjct: 154 YDMDEEDLAWLDMVNEKRRVDG--HSLVSADTFELLVDRLEKESY 196
>sp|Q66JA8|EPC2_XENLA Enhancer of polycomb homolog 2 OS=Xenopus laevis GN=epc2 PE=2 SV=1
Length = 804
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 311 VIPIP-GVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKF 369
VIP+P V Y F +P +I + L +YDMDSEDE L +
Sbjct: 73 VIPVPEAESNVHYYSRLYKGEFKQPKQFIHI----TPFNLDYEQPDYDMDSEDETLLNRL 128
Query: 370 NNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKE-VVLAV 428
N + + FE+++D EKA S S +EA L L + + ++ +V
Sbjct: 129 NRKM--------EIKPLQFEIMIDRLEKA--SSNQLVSLQEAK----LLLNEDDYLIKSV 174
Query: 429 YNHWKQKRKQKRAALL 444
Y++W +KRK R L
Sbjct: 175 YDYWVRKRKNCRGPCL 190
>sp|Q6GQJ2|JADE1_XENLA Protein Jade-1 OS=Xenopus laevis GN=phf17 PE=2 SV=1
Length = 827
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 285 NRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDE 344
N +D+ D +++ ++ QV V+ IP + E V F RP YI + E
Sbjct: 61 NPEDYYVLADPWRQEWEKGVQVPVNPEF-IPETIARVIAEKDKVVTFTRPRKYIHSSGSE 119
Query: 345 VS-------RALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEK 397
+ LA YD++ D WL+ N EF + + E T E +++ FEK
Sbjct: 120 PPEVGYVDIQTLADAVCRYDLNEMDVAWLQLINEEFKEMG--MQQLDEYTMEQVLEEFEK 177
Query: 398 AYF 400
+
Sbjct: 178 KCY 180
>sp|Q6DJR9|EPC2_XENTR Enhancer of polycomb homolog 2 OS=Xenopus tropicalis GN=epc2 PE=2
SV=1
Length = 804
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 309 SKVIPIPGV-CEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLK 367
S VIP+P V Y F +P +I + L +YDMDSEDE L
Sbjct: 71 SMVIPVPEAESNVHYYSRLYKGEFKQPKQFIHIQ----PFNLDYEQPDYDMDSEDETLLN 126
Query: 368 KFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKE--VV 425
+ N + + FE+++D EKA SN+ + L ++ ++
Sbjct: 127 RLNRKM--------EIKPLQFEIMIDRLEKA-------SSNQLVTLQEAKLLLNEDDYLI 171
Query: 426 LAVYNHWKQKRKQKRAALL 444
+VY++W +KRK R L
Sbjct: 172 KSVYDYWVRKRKNCRGPSL 190
>sp|Q7ZVP1|JADE3_DANRE Protein Jade-3 OS=Danio rerio GN=phf16 PE=2 SV=1
Length = 795
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 287 QDWLDFKDLYKECSDRNAQVSVSK-VIPIPGVCEVLGYEDSNTVPFCRPDSYIS------ 339
+D+ D +K+ ++ QV S IP P V + E V F +P YI
Sbjct: 64 EDYYLLADTWKQEWEKGVQVLASPDTIPQPSVRIIT--EKPKEVLFSKPRKYIQCWSQDS 121
Query: 340 -----VNVDEVSRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDA 394
VN+ E++ A+ + YD+D D WL++ N E + V E T E +++A
Sbjct: 122 TETGYVNIKELAEAMCR----YDLDDMDLYWLQQLNAELGMMGD--GVVDELTMERVMEA 175
Query: 395 FEK 397
E+
Sbjct: 176 LER 178
>sp|Q6IE81|JADE1_HUMAN Protein Jade-1 OS=Homo sapiens GN=PHF17 PE=1 SV=1
Length = 842
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 277 DNWKLEFSNRQDWLDFKDLYKECSDRNAQVSVSK-VIPIPGVCEVLGYEDSNTVPFCRPD 335
D+++L N ++ D +++ ++ QV VS IP P V V+ E S + F RP
Sbjct: 60 DSYQL---NPDEYYVLADPWRQEWEKGVQVPVSPGTIPQP-VARVVSEEKS--LMFIRPK 113
Query: 336 SYISVNVDEVS-------RALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTF 388
YI + E R LA YD++ D WL+ N EF E + E + E T
Sbjct: 114 KYIVSSGSEPPELGYVDIRTLADSVCRYDLNDMDAAWLELTNEEF-KEMGMPE-LDEYTM 171
Query: 389 ELIVDAFEK 397
E +++ FE+
Sbjct: 172 ERVLEEFEQ 180
>sp|Q03FS2|RBFA_PEDPA Ribosome-binding factor A OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=rbfA PE=3 SV=1
Length = 116
Score = 37.7 bits (86), Expect = 0.18, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 118 QYRSSLNSRAIQKRRSSLRRRRARNPSLIGSQKASGALVSDLTSCR-KSSIPSSSAVSKS 176
QYRS S+ I+K S + RRR R+P + G + DL + SI S A
Sbjct: 4 QYRSDRLSQEIEKEVSDILRRRVRDPRVEGVTITGVDVTGDLQQAKIYYSILSDKASDDQ 63
Query: 177 KLRSSLQHSSVLSIKEVSS 195
K ++ L+ +S L KE+ S
Sbjct: 64 KTKAGLEKASGLIRKELGS 82
>sp|Q803A0|JADE1_DANRE Protein Jade-1 OS=Danio rerio GN=phf17 PE=2 SV=1
Length = 829
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 285 NRQDWLDFKDLYKECSDRNAQVSVS-KVIPIPGVCEVLGYEDSNTVP-FCRPDSYISVNV 342
N +D+ + D +++ ++ QV VS + IP C V + +T P F +P I +
Sbjct: 59 NPEDYYELADPWRQEWEKGVQVPVSPESIP---QCAVRTVAEKSTAPLFIKPKKLIRSSE 115
Query: 343 DEV-----SRALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEK 397
+ + LA YD++ ED WL+ N EF + + E T E +++ FE+
Sbjct: 116 SSMLGYVGIQTLADGMCRYDLNEEDVAWLQITNEEFSKMG--MQPLDELTMERVMEEFER 173
Query: 398 AYF 400
+
Sbjct: 174 RCY 176
>sp|Q8C9X6|EPC1_MOUSE Enhancer of polycomb homolog 1 OS=Mus musculus GN=Epc1 PE=2 SV=1
Length = 813
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 311 VIPIPGV-CEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKF 369
VIP+P + YE F P I + +L +YD+DSEDE ++ K
Sbjct: 73 VIPVPEAESNIAYYESIYPGEFRMPKQLIHIQ----PFSLDAEQPDYDLDSEDEVFVNKL 128
Query: 370 NNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVY 429
+ + FE ++D EK P S +EA + L + E++ VY
Sbjct: 129 KKKM--------DICPLQFEEMIDRLEKGSGQQP--VSLQEAKLLLKED---DELIREVY 175
Query: 430 NHWKQKRKQKRAALL 444
+W +KRK R + L
Sbjct: 176 EYWIKKRKTCRGSSL 190
>sp|Q5E9T7|JADE1_BOVIN Protein Jade-1 OS=Bos taurus GN=PHF17 PE=2 SV=1
Length = 509
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 285 NRQDWLDFKDLYKECSDRNAQVSVSK-VIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVD 343
N ++ D +++ ++ QV VS IP P V V+ E S + F RP YI +
Sbjct: 65 NPDEYYVLADPWRQEWEKGVQVPVSPGTIPQP-VARVVSEEKS--LMFIRPKKYIVSSGS 121
Query: 344 EVS-------RALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFE 396
E R LA YD++ D WL+ N EF E + E + E T E +++ FE
Sbjct: 122 EPPELGYVDIRTLADSVCRYDLNDMDAAWLELTNEEF-KEMGMPE-LDEYTMERVLEEFE 179
Query: 397 K 397
+
Sbjct: 180 Q 180
>sp|Q9H2F5|EPC1_HUMAN Enhancer of polycomb homolog 1 OS=Homo sapiens GN=EPC1 PE=1 SV=1
Length = 836
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 311 VIPIP-GVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRALAKRTANYDMDSEDEEWLKKF 369
VIP+P + YE F P I + +L +YD+DSEDE ++ K
Sbjct: 73 VIPVPEAESNIAYYESIYPGEFKMPKQLIHIQ----PFSLDAEQPDYDLDSEDEVFVNKL 128
Query: 370 NNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVNLCLELGQKEVVLAVY 429
+ + FE ++D EK P S +EA + L + E++ VY
Sbjct: 129 KKKM--------DICPLQFEEMIDRLEKGSGQQP--VSLQEAKLLLKED---DELIREVY 175
Query: 430 NHWKQKRKQKRAALL 444
+W +KRK R L
Sbjct: 176 EYWIKKRKNCRGPSL 190
>sp|Q9FLS0|FB253_ARATH F-box protein At5g07610 OS=Arabidopsis thaliana GN=At5g07610 PE=2
SV=1
Length = 420
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 30/159 (18%)
Query: 221 CCRVEGANVILEMSHSKEWHLVVKKDGETRYSFKAQRIMRPSSFNRFTHAILWAGDDNWK 280
C R N S S+ +H+ V E + PS+F F++++ W G NW
Sbjct: 188 CLRGRSNNSFSSASDSELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW- 246
Query: 281 LEFSNRQDWLDFKDLYKECSDRNAQVSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSYISV 340
FS+R D L F D N Q K++P+P +ED PD I +
Sbjct: 247 YGFSSR-DCLSF--------DINTQ--EIKILPLPD----HEHEDEPL-----PDPRILM 286
Query: 341 NVDEVSRALAKRTAN---------YDMDSEDEEWLKKFN 370
+DE L N Y+M+S W K+N
Sbjct: 287 FLDESQGNLYYIEVNNQSSSNLRVYEMESNSSSWSVKYN 325
>sp|Q29EQ3|RNO_DROPS PHD finger protein rhinoceros OS=Drosophila pseudoobscura
pseudoobscura GN=rno PE=3 SV=2
Length = 3313
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 348 ALAKRTANYDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFE 396
ALA+ T YD+D DE WL+ +N++ H++E FE +++ E
Sbjct: 253 ALAENTCAYDIDPIDEAWLRLYNSDRAQCGAF--HINETQFERVIEELE 299
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 356 YDMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEKAYFCSPDDYSNEEAAVN 414
YDMD ED WL+ N + + + VS+ FE ++D FEK C +++ ++
Sbjct: 156 YDMDEEDYAWLEIVNEK--RKGDCVPAVSQSMFEFLMDRFEKESHCENQKQGEQQSLID 212
>sp|Q6CEV5|EPL1_YARLI Enhancer of polycomb-like protein 1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=EPL1 PE=3 SV=1
Length = 839
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 23/100 (23%)
Query: 304 AQVSVSKV----IPIPGVCEVLG-YEDSNTVPFCRPDSYI--SVNVDEVSRALAKRTANY 356
AQ + +KV IP P +V Y+ + F P SYI SV V+E S L Y
Sbjct: 70 AQSTGAKVEKIYIPTPDASQVWKEYDRFYSSSFHEPASYIRTSVTVEETSGCL------Y 123
Query: 357 DMDSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFE 396
+MD ED E+LK +SED FE ++ FE
Sbjct: 124 NMDDEDAEFLKT----------CKPPISEDDFEEVMHRFE 153
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 306 VSVSKVIPIPGVCEVLGYEDSNTVPFCRPDSY---ISVNVDEVSRALAKRTANYDMDSED 362
VS S +P V +D+ P RP SY I + +E+ + YDMD ED
Sbjct: 168 VSASTTPKLPEVVYRELEQDTPDAP-PRPTSYYRYIEKSAEELDEEV-----EYDMDEED 221
Query: 363 EEWLKKFNNEFVTENELHEHVSEDTFELIVDAFEK-AYFCS-----PDDYSNEEAAVNLC 416
WL N TE + ++ FE ++D EK +YF S P+ +E+A +C
Sbjct: 222 YIWLDIMNERRKTEGV--SPIPQEIFEYLMDRLEKESYFESHNKGDPNALVDEDAVCCIC 279
>sp|Q7S747|EPL1_NEUCR Enhancer of polycomb-like protein 1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=epl-1 PE=3 SV=1
Length = 589
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 302 RNAQVSVSKVIPIPGVCEV-LGYEDSNTVPFCRPDSYI--SVNVDEVSRALAKRTANYDM 358
+ A V+ + IP+P + L Y+ + +YI S V+E L YDM
Sbjct: 58 KGAGVAADQEIPVPPPQQSELDYDQFYPQKVAKTSTYIRFSQTVEECISCL------YDM 111
Query: 359 DSEDEEWLKKFNNEFVTENELHEHVSEDTFELIVDAFE 396
+DE +LK +N + L SED FE I+D +E
Sbjct: 112 TEDDETFLKSYNMKLTPSARL----SEDDFERIMDVYE 145
>sp|A4XB95|MSHB_SALTO 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Salinispora tropica (strain ATCC BAA-916
/ DSM 44818 / CNB-440) GN=mshB PE=3 SV=1
Length = 314
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 322 GYEDSNTVPFCRPDSYISVNVDEVSRALAKRTA--NYDMDSEDEEWLKKFNNEFVTE 376
G +++ +PFC PD I+ +D + +AK A + D WL F +E
Sbjct: 201 GIQEAVELPFCTPDERIAARIDATGQHVAKEAAMRAHATQIPDNSWLYSIAGNFGSE 257
>sp|Q92613|JADE3_HUMAN Protein Jade-3 OS=Homo sapiens GN=PHF16 PE=1 SV=1
Length = 823
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 292 FKDLYKECSDRNAQVSVSK-VIPIPGVCEVLGYEDSNTVPFCRPDSYISVNVDEVSRA-- 348
F D +KE ++ QV S +P P + + E V F RP YI + + +
Sbjct: 68 FADTWKEEWEKGVQVPASPDTVPQPSL--RIIAEKVKDVLFIRPRKYIHCSSPDTTEPGY 125
Query: 349 -----LAKRTANYDMDSEDEEWLKKFNNEFVTE--NELHEHVSEDTFELI 391
LA YD+D D WL++ N + + E++ E T E++
Sbjct: 126 INIMELAASVCRYDLDDMDIFWLQELNEDLAEMGCGPVDENLMEKTVEVL 175
>sp|A4GYP8|RPOC2_POPTR DNA-directed RNA polymerase subunit beta'' OS=Populus trichocarpa
GN=rpoC2 PE=3 SV=1
Length = 1390
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 128 IQKRRSSLRRRRARNPSLIGSQKASGALVSDLTSCRKSSIPSSSAVSKSKLRSSL-QHSS 186
+ K R S R+ +PS +G L+SD R + P S SK+++ SL Q+
Sbjct: 869 LGKSRISYISRKRNDPSGLG-------LISDNGPDRTNINPFYSIYSKTRIPQSLKQNQG 921
Query: 187 VLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGAN 228
+SI + L+R+ C S++++ S C R++ +N
Sbjct: 922 TISISTL----------LNRNMECQSLIILSSSNCFRMDPSN 953
>sp|Q14FG7|RPOC2_POPAL DNA-directed RNA polymerase subunit beta'' OS=Populus alba GN=rpoC2
PE=3 SV=1
Length = 1390
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 128 IQKRRSSLRRRRARNPSLIGSQKASGALVSDLTSCRKSSIPSSSAVSKSKLRSSL-QHSS 186
+ K R S R+ +PS +G L+SD R + P S SK+++ SL Q+
Sbjct: 869 LGKSRISYISRKRNDPSGLG-------LISDNGPDRTNINPFYSIYSKTRIPQSLKQNQG 921
Query: 187 VLSIKEVSSTVDSLMLDLDRSCCCVSILVMESDRCCRVEGAN 228
+SI + L+R+ C S++++ S C R++ +N
Sbjct: 922 TISISTL----------LNRNMECQSLIILSSSNCFRMDPSN 953
>sp|Q9ZCZ8|IF2_RICPR Translation initiation factor IF-2 OS=Rickettsia prowazekii (strain
Madrid E) GN=infB PE=3 SV=1
Length = 831
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 144 SLIGSQKASGALVSDLTSCRKSSIPSSSAVSKSKLRSSLQHSSVLSIKE 192
SL G+Q A L RKSSI S++ +S +K R+SL S + S KE
Sbjct: 27 SLTGAQSFVNAKSKTLVEVRKSSIGSTTTISLNKERNSLDQSVIDSNKE 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,990,425
Number of Sequences: 539616
Number of extensions: 6513561
Number of successful extensions: 22462
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 22330
Number of HSP's gapped (non-prelim): 162
length of query: 475
length of database: 191,569,459
effective HSP length: 121
effective length of query: 354
effective length of database: 126,275,923
effective search space: 44701676742
effective search space used: 44701676742
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)