BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011921
(475 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60936|ADCK3_MOUSE Chaperone activity of bc1 complex-like, mitochondrial OS=Mus
musculus GN=Adck3 PE=2 SV=2
Length = 645
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/415 (40%), Positives = 242/415 (58%), Gaps = 32/415 (7%)
Query: 64 EFTNPKPKESIVYFNDSSDVAQSAPSTDKDGAVDQFAAS--VRDVSNDG------GKLDG 115
+F+ P+ + + F+ +S + QS + G +A+S R+ G G+++G
Sbjct: 81 QFSTPQAAGTSLDFSAASSLDQSLSPSHSQGPAPAYASSGPFREAGLPGQATSPMGRVNG 140
Query: 116 ----ENEAKVLESSVEKESLVKEFESIDLGDRVDVDIEREATAKRR------------RP 159
++ L + +++ S ++ S+ G DIE+ AK R R
Sbjct: 141 RLFVDHRDLFLANGIQRRSFHQDQSSV--GGLTAEDIEKARQAKARPESKPHKQMLSERA 198
Query: 160 RERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAI--SPFLSDQNA 217
RERKVP T RL F GL GL G + E K+ + + +S K+A + SPFLS+ NA
Sbjct: 199 RERKVPVTRIGRLANFGGLAVGLGIGALAEVAKKSLR-SENSTGKKAVLDSSPFLSEANA 257
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ER+ LC++RGAALK+GQMLSIQD++ + + + VRQ AD MP Q+ + L+++L
Sbjct: 258 ERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMTKTLNSDL 317
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
G W+ KL F+ P AAASIGQVH A K G +VAMKIQYPGVA SI SD+ N+ +L+
Sbjct: 318 GPHWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLN 377
Query: 338 YTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSK 397
+N++P+GL+ + + V R EL+ ECDY+ EAA K+FR++L + FYVP +VD+ S
Sbjct: 378 MSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHPFFYVPEIVDELCSP 437
Query: 398 RVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQ---RWLSFL 449
VLTTEL+SG P+D+ LSQE RN + +L L L ELF F MQ W +F
Sbjct: 438 HVLTTELISGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFF 492
>sp|Q8NI60|ADCK3_HUMAN Chaperone activity of bc1 complex-like, mitochondrial OS=Homo
sapiens GN=ADCK3 PE=1 SV=1
Length = 647
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 197/319 (61%), Gaps = 16/319 (5%)
Query: 147 DIEREATAKRR------------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRI 194
DIE+ AK R RERKVP T RL F GL GL +G + E K+
Sbjct: 177 DIEKARQAKARPENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKS 236
Query: 195 MYGT-PSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAA 253
+ PS + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ + +
Sbjct: 237 LRSEDPSGKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKI 296
Query: 254 LDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVA 313
+ VRQ AD MP Q+ + L+ +LG +W+ KL F+ P AAASIGQVH A K G +VA
Sbjct: 297 FERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVA 356
Query: 314 MKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQK 373
MKIQYPGVA SI SD+ N+ +L+ +N++P+GL+ + + V R EL+ ECDY+ EAA +
Sbjct: 357 MKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACAR 416
Query: 374 RFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTL 433
+FRD+L FYVP +VD+ S VLTTELVSG P+D+ LSQE RN + +L L L
Sbjct: 417 KFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCL 476
Query: 434 MELFVFRFMQ---RWLSFL 449
ELF F FMQ W +F
Sbjct: 477 RELFEFHFMQTDPNWSNFF 495
>sp|Q29RI0|ADCK3_BOVIN Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus
GN=ADCK3 PE=2 SV=1
Length = 648
Score = 285 bits (728), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 201/326 (61%), Gaps = 16/326 (4%)
Query: 140 LGDRVDVDIEREATAKRR------------RPRERKVPSTPFSRLLGFAGLGAGLAWGTV 187
+G DIE+ AK R RERKVP T RL F GL GL +G +
Sbjct: 170 MGGLTAEDIEKARQAKARPESKPHKQALSEHARERKVPVTRIGRLANFGGLAVGLGFGAL 229
Query: 188 QESTKRIMY-GTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLV 246
E K+ + PS + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ +
Sbjct: 230 AEVAKKSLRPDDPSGKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFI 289
Query: 247 PAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVT 306
+ D VRQ AD MP Q+ + L+ +LG +W+ KL F+ P AAASIGQVH A
Sbjct: 290 NPHLAKIFDRVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARL 349
Query: 307 KDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYE 366
K G +VAMKIQYPGVA SI SD+ N+ +L+ +N++P+GL+ + + V R EL+ ECDY+
Sbjct: 350 KGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPEGLFPEHLIDVLRRELALECDYQ 409
Query: 367 MEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGK 426
EAA +RFR++L + FYVP +VD+ S VLTTELVSG P+D+ LSQE RN +
Sbjct: 410 REAACARRFRELLKDHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICY 469
Query: 427 KLLELTLMELFVFRFMQ---RWLSFL 449
+L L L ELF F+FMQ W +F
Sbjct: 470 NILVLCLRELFEFQFMQTDPNWSNFF 495
>sp|Q5BJQ0|ADCK3_RAT Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus
norvegicus GN=Adck3 PE=2 SV=1
Length = 649
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 18/320 (5%)
Query: 147 DIEREATAKRR------------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRI 194
DIE+ AK R R RERKVP T RL F GL GL +G + E K+
Sbjct: 178 DIEKARQAKARPESKPHKQMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKS 237
Query: 195 MYGTPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILA 252
+ + +S K+A + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ + +
Sbjct: 238 LR-SENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLAK 296
Query: 253 ALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQV 312
+ VRQ AD MP Q+ + L+ +LG W+ KL F+ P AAASIGQVH A K G +V
Sbjct: 297 IFERVRQSADFMPLKQMTKTLNNDLGPHWRDKLEYFEERPFAAASIGQVHLARLKGGREV 356
Query: 313 AMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQ 372
AMKIQYPGVA SI SD+ N+ +L+ +N++P+GL+ + + V R EL+ ECDY+ EAA
Sbjct: 357 AMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYA 416
Query: 373 KRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELT 432
K+FR++L + FYVP +VD+ S VLTTEL++G P+D+ LSQE RN + +L L
Sbjct: 417 KKFRELLKDHPFFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVLC 476
Query: 433 LMELFVFRFMQ---RWLSFL 449
L ELF F MQ W +F
Sbjct: 477 LRELFEFHVMQTDPNWSNFF 496
>sp|Q18486|COQ8_CAEEL Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans
GN=coq-8 PE=3 SV=2
Length = 755
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 196/314 (62%), Gaps = 3/314 (0%)
Query: 139 DLGDRVDVDIEREATAKRRRPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGT 198
+L +V++E R E VP+T RL F L GL G E T+R
Sbjct: 281 ELPKNFEVNLEMGNVHTLTRSNESSVPATRIGRLATFGQLAFGLLGGATAEVTRRTFGIG 340
Query: 199 PSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVR 258
Q++ +PFLS+ NA+R+ LCR+RGAALK+GQMLSIQD S VP +L + VR
Sbjct: 341 KRLQEEGIPKNPFLSEANADRIVATLCRVRGAALKLGQMLSIQDSSTVPPALLQIFERVR 400
Query: 259 QGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQY 318
Q AD MP Q+++ + G DW+ K FD +P A ASIGQVH+AV KDG VA+K+QY
Sbjct: 401 QSADFMPIKQVHRQMKDAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQY 460
Query: 319 PGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDV 378
PGVA+ I+SDI N+ +L + PKG++LD+ + VAR EL +ECDYE EA K+FR++
Sbjct: 461 PGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFREL 520
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFV 438
+++ + YVP V+D+ SS RVLTTELV G P+D + Q R+Y+ K +EL L E+F+
Sbjct: 521 IADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFL 580
Query: 439 FRFMQ---RWLSFL 449
+RFMQ W +F
Sbjct: 581 WRFMQTDPNWSNFF 594
>sp|Q6AY19|ADCK4_RAT Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus
norvegicus GN=Adck4 PE=2 SV=1
Length = 528
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/295 (49%), Positives = 197/295 (66%), Gaps = 6/295 (2%)
Query: 158 RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNA 217
R RERKVP++ SRL F GL GL G + E TK+ + P + SPFL++ NA
Sbjct: 79 RSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSL---PGGSLQHEGSSPFLTEANA 135
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ER+ LC +RGAALKIGQMLSIQD SL+ + + VRQ AD MPRWQ+ +VL+ EL
Sbjct: 136 ERIVQTLCTVRGAALKIGQMLSIQDNSLISPQLQRVFERVRQSADFMPRWQMMKVLEEEL 195
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
G DWQ K+ S + P AAASIGQVH+ V KDG +VA+KIQYPGVA+SI+SD+QN+ LL
Sbjct: 196 GKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQNLLALLK 255
Query: 338 YTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSK 397
+ +P+GL+ + +++ ++EL+ ECDY EAA + F+ +L++ F VP VV++ +
Sbjct: 256 MSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAVVEELCTT 315
Query: 398 RVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQ---RWLSFL 449
RVL EL GIP+D+ LSQ+ RN + +LL L L ELF FRFMQ W +FL
Sbjct: 316 RVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFL 370
>sp|Q566J8|ADCK4_MOUSE Uncharacterized aarF domain-containing protein kinase 4 OS=Mus
musculus GN=Adck4 PE=2 SV=1
Length = 533
Score = 268 bits (686), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/317 (47%), Positives = 202/317 (63%), Gaps = 14/317 (4%)
Query: 147 DIEREATAKRR---------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYG 197
DI R A+ R R RERKVP++ SRL F GL GL G + E TK+ + G
Sbjct: 59 DIRRAREARLRKAPRPQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLPG 118
Query: 198 TPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALD 255
+ + + SPFLS+ NAER+ LC +RGAALKIGQMLSIQD S + + +
Sbjct: 119 GSLQHEGVSGLGSSPFLSEANAERIVQTLCTVRGAALKIGQMLSIQDNSFISPQLQRIFE 178
Query: 256 IVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMK 315
VRQ AD MPRWQ+ +VL+ ELG DWQ K+ S + P AAASIGQVH+ + KDG +VA+K
Sbjct: 179 RVRQSADFMPRWQMMRVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGLLKDGTEVAVK 238
Query: 316 IQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRF 375
IQYPGVA SI+SD++N+ LL + +P+GL+ + +++ ++EL+ ECDY EAA + F
Sbjct: 239 IQYPGVAQSIQSDVENLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTF 298
Query: 376 RDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLME 435
R +L++ F VP VV + + RVL EL GIP+D+ LSQ+ RN + +LL L L E
Sbjct: 299 RKLLADDPFFRVPAVVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRE 358
Query: 436 LFVFRFMQ---RWLSFL 449
LF FRFMQ W +FL
Sbjct: 359 LFEFRFMQTDPNWANFL 375
>sp|Q96D53|ADCK4_HUMAN Uncharacterized aarF domain-containing protein kinase 4 OS=Homo
sapiens GN=ADCK4 PE=1 SV=2
Length = 544
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 201/317 (63%), Gaps = 14/317 (4%)
Query: 147 DIEREATAKRR---------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYG 197
DI R A+ R R RERKVP++ SRL F GL GL G + E K+ M G
Sbjct: 58 DIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPG 117
Query: 198 TPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALD 255
+ + + SPFLS+ NAER+ LC +RGAALK+GQMLSIQD S + + +
Sbjct: 118 GRLQSEGGSGLDSSPFLSEANAERIVQTLCTVRGAALKVGQMLSIQDNSFISPQLQHIFE 177
Query: 256 IVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMK 315
VRQ AD MPRWQ+ +VL+ ELG DWQ+K+ S + P AAASIGQVH+ + +DG +VA+K
Sbjct: 178 RVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVK 237
Query: 316 IQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRF 375
IQYPG+A SI+SD+QN+ +L + +P GL+ + +++ ++EL+ ECDY EAA + F
Sbjct: 238 IQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNF 297
Query: 376 RDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLME 435
R +L+N F VP VV + + RVL EL G+P+D+ LSQ+ RN + +LL L L E
Sbjct: 298 RQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRE 357
Query: 436 LFVFRFMQ---RWLSFL 449
LF FRFMQ W +FL
Sbjct: 358 LFEFRFMQTDPNWANFL 374
>sp|Q54IH6|ABKA_DICDI Probable serine/threonine-protein kinase abkA OS=Dictyostelium
discoideum GN=abkA PE=3 SV=1
Length = 565
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 201/332 (60%), Gaps = 24/332 (7%)
Query: 158 RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNA 217
+ + K+PS+ SR F L G+ G + E TKR + + SS ++ S +D NA
Sbjct: 102 KSKGHKIPSSQTSRFWEFTKLAVGVGAGFLGEKTKRTIDSSSSSSSPSSSYSAIFTDTNA 161
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ER+A + RMRGAALKIGQ+LSIQDES +P + LD VR+ A+ +P QL + EL
Sbjct: 162 ERMAESFSRMRGAALKIGQVLSIQDESFLPPKFVEILDRVRKNANPIPLEQLYNTMSNEL 221
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
G +W+SK F +P+AAASIGQVHRA+T DG +VA+K+QYPGVADSI SDI+N+ LL
Sbjct: 222 GENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIKNLSSLLK 281
Query: 338 YTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNA------------KGF 385
++P+ Y++ +++ AR EL E DY EA+NQ +F+ +L ++ K
Sbjct: 282 M--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSINSGTNGSFKYLKDL 339
Query: 386 YVPYVVDDTSSKRVLTTELVSGIPIDKVA--QLSQETRNYVGKKLLELTLMELFVFRFMQ 443
YVP V+ + ++KR+LTTE V G IDK+ +QETR+++ K +L L L ELF F FMQ
Sbjct: 340 YVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNILSLCLAELFEFNFMQ 399
Query: 444 ---RWLSFL-----PWIYILIEGRCSNLFPEL 467
W +F+ I +L G C N E
Sbjct: 400 VDPNWTNFVVDFENKRINLLDFGACRNYKSEF 431
>sp|Q5RGU1|ADCK3_DANRE Chaperone activity of bc1 complex-like, mitochondrial OS=Danio
rerio GN=adck3 PE=2 SV=1
Length = 602
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 186/319 (58%), Gaps = 31/319 (9%)
Query: 145 DVDIEREATAKRRRP---------RERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIM 195
D++ REA +P RERKVP T RL F GL GL G + E K+ +
Sbjct: 146 DIEKAREAKQNGSKPHKQMLSERARERKVPVTRLGRLANFGGLAVGLGIGALAEVAKKSL 205
Query: 196 YGTPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAA 253
+ +K+A + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ + +
Sbjct: 206 RSEDKNGNKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPQLAKI 265
Query: 254 LDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVA 313
+ VRQ AD MP Q+ + L +LG +W+ KL F+ P AAASIGQ
Sbjct: 266 FERVRQSADFMPIKQMTKALSNDLGPNWRDKLEMFEERPFAAASIGQ------------- 312
Query: 314 MKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQK 373
YPGVA SI SD+ N+ +L +N +P+GL+ + + V R EL+ ECDY EA +
Sbjct: 313 ----YPGVAQSINSDVNNLMTVLSMSNALPEGLFPEHLIDVMRRELALECDYIREAKCAR 368
Query: 374 RFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTL 433
+F+++L + FYVP V+ + SS+ VLTTELV G P+D+ L+QE +N + K +L L L
Sbjct: 369 KFKELLKDHPFFYVPDVISELSSQHVLTTELVPGFPLDQAEALTQELKNEICKNILNLCL 428
Query: 434 MELFVFRFMQ---RWLSFL 449
ELF FR+MQ W +F
Sbjct: 429 RELFEFRYMQTDPNWSNFF 447
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc1 PE=2 SV=1
Length = 610
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 181/291 (62%), Gaps = 11/291 (3%)
Query: 163 KVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNAERLAY 222
KVPS+ +SRL + GL L+ G + E KR M+G S+D A + L+++N E L
Sbjct: 178 KVPSSQWSRLWHYGGLATSLSVGAIGEKMKR-MWGI--SKDDGALL---LNERNVEILVN 231
Query: 223 ALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQ 282
L +MRGAALK+GQMLS QD L+ + L+ VR GA MP QL QV+ LG +W
Sbjct: 232 KLTQMRGAALKMGQMLSFQDSKLIDPRVSQILERVRDGAHSMPEKQLEQVMVKNLGKNWM 291
Query: 283 SKLTSFDYEPMAAASIGQVHRA-VTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNL 341
+ + FD +PMAAASIGQVHRA + + M+V +K+QYPGV SI+SD+ N+ LL + +
Sbjct: 292 THYSEFDRKPMAAASIGQVHRARLASNHMEVVVKVQYPGVMSSIDSDLNNLAYLLKASRI 351
Query: 342 IPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLT 401
+PKGL+L++++ AR+EL ECDYE EAA +RF +L N F VP V + S V+T
Sbjct: 352 LPKGLFLENSLAAARKELKWECDYEREAAFAERFGSLLKNDSDFKVPMVFREASGPSVIT 411
Query: 402 TELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQ---RWLSFL 449
E + GI + K + SQ TRN++G L + L E+ + FMQ W +FL
Sbjct: 412 LEYLHGIALGK-QKYSQATRNHIGYLLTKQCLREISEYHFMQTDPNWSNFL 461
>sp|P27697|COQ8_YEAST Probable serine/threonine-protein kinase COQ8, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ8 PE=1 SV=1
Length = 501
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 181/311 (58%), Gaps = 15/311 (4%)
Query: 149 EREATAKRRRPRERK-------VPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSS 201
E E +R+ E+K VP++ SRL + L AG+ + + G +
Sbjct: 48 EGEENVERKHEEEKKDTLKSSSVPTSRISRLFHYGSLAAGVGMNAAAKGISEVAKGNSPT 107
Query: 202 QDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
S LSD N +R+ +MRG ALKIGQ+LS QDE ++P + L V+ A
Sbjct: 108 WK-----SLILSDSNIDRITNKFSKMRGVALKIGQLLSFQDEKVLPKELYEILSRVQNSA 162
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ MP+ QL +V+ ELG++W++K + FD PMAAASIGQVH A G +V +KIQYPGV
Sbjct: 163 NHMPQRQLEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQYPGV 222
Query: 322 ADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSN 381
+SI+SD+ ++ +LL ++L+PKGL+LD + AR EL ECDY EA ++F +L +
Sbjct: 223 KESIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQKFEALLKD 282
Query: 382 AKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRF 441
F VP+V + ++ ++T + G I K+ + SQET+N++ + ++ L L E+ F++
Sbjct: 283 DPAFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCLEEIATFKY 342
Query: 442 MQ---RWLSFL 449
MQ W +FL
Sbjct: 343 MQTDPNWANFL 353
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 193 RIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGA-ALKIGQMLSIQDESLVPAPIL 251
+I+ TP + S ++A+ L LC G +K GQ ++ + ++P
Sbjct: 224 KILSYTPEKSSEYLEKSKICHQESAD-LILDLCLTNGGLYIKAGQYIASLNH-ILPIQYT 281
Query: 252 AALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQ 311
L +++ A +++ V +LG+ + FD P+AAAS+ QVHRA+TK+G +
Sbjct: 282 KTLSVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEE 341
Query: 312 VAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAAN 371
VA+K+QY + + + DI +LL N+ + + + L +E D+ EA N
Sbjct: 342 VAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFEFNWMAEEMKNVLIKELDFSQEADN 401
Query: 372 QKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQ-----LSQETRNYVGK 426
+R LS+ Y+P V SSKR+LTTE + G I+ V LS++T V +
Sbjct: 402 AERAAQDLSSNNNAYIPKVFRPYSSKRILTTEFIHGCKINNVQAIRSMGLSEKT---VSQ 458
Query: 427 KLLELTLMELFVFRFMQ 443
+ +E+ ++F+ F+
Sbjct: 459 RFMEIMCEQIFIHAFVH 475
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 8/266 (3%)
Query: 180 AGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLS 239
A + W + E + + GT ++ +I + ++A RL C RG +K+GQ L
Sbjct: 47 AAITWDYLTE-LRHVKAGT----EEYESIKSQVHFRSAHRLLDLCCANRGTFIKVGQHLG 101
Query: 240 IQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIG 299
E LVP L ++ A P + QV+ +LG + F+ +P+ AAS+
Sbjct: 102 AL-EYLVPPEYTKTLSVLHSQAPCTPFPDVVQVIREDLGKEISEVFVEFEEKPLGAASLA 160
Query: 300 QVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREEL 359
QVHRAV +DG +VA+K+Q+P V DI +++LL I ++ A++ L
Sbjct: 161 QVHRAVLQDGRKVAVKVQHPKVQAQSARDILLMEVLLHAVKKIFPQFEFMWLIEEAKKNL 220
Query: 360 SRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPID--KVAQLS 417
E D+E E N ++ ++S+ +P + + S+KRVL E + G ++ + + +
Sbjct: 221 PLELDFENEGRNAEKMSAIVSSFSFLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRN 280
Query: 418 QETRNYVGKKLLELTLMELFVFRFMQ 443
Q N V + L +L +FV F+
Sbjct: 281 QIDINQVARALGQLYSEMIFVHGFVH 306
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 3/231 (1%)
Query: 215 QNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLD 274
++A RL C RG +K+GQ L+ E LVP L ++ A P + QV+
Sbjct: 77 RSAHRLLDLCCFNRGTFIKVGQHLAAL-EYLVPPEYTKTLSVLHSQAPCTPFTDVVQVIR 135
Query: 275 AELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKI 334
+LG + F+ P+ AAS+ QVHRAV +DG +VA+K+Q+P V DI +++
Sbjct: 136 EDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILIMEV 195
Query: 335 LLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
LL I ++ A++ L E D++ E N ++ ++S+ +P + +
Sbjct: 196 LLHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFSFLRIPRIYWEL 255
Query: 395 SSKRVLTTELVSGIPID--KVAQLSQETRNYVGKKLLELTLMELFVFRFMQ 443
S+KRVL E + G ++ + + +Q N V L +L +FV F+
Sbjct: 256 STKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVH 306
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 9/231 (3%)
Query: 215 QNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLD 274
++AERL C RG +K+GQ L D L+P L ++ A R ++ QV+
Sbjct: 74 RSAERLRELCCANRGTFIKVGQHLGALD-YLLPEEYTRTLKVLHSQAPQSTRQEIEQVIR 132
Query: 275 AELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKI 334
+LG + + SF+ P+ AAS+ QVH+AV +DG VA+KIQ+P V DI +++
Sbjct: 133 EDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEV 192
Query: 335 LLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
LL I ++ A++ L E D+ E N ++ +L N + VP + +
Sbjct: 193 LLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQMLKNFEFLKVPRIYWEL 252
Query: 395 SSKRVLTTELVSGIPIDKVAQLSQE-------TRNYVGKKLLELTLMELFV 438
S++RVL E + G ++ A + + +RN +GK E+ + FV
Sbjct: 253 STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRN-LGKLYSEMIFVNGFV 302
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 215 QNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLD 274
++ E L A + +KIGQ+LS + + L+P P + L ++ + +
Sbjct: 31 KSPENLRKAFEELGPTFIKIGQILSTRPD-LLPLPYIKELSKLQNNVPPENFIDIENLFF 89
Query: 275 AELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKI 334
EL S + FD P+ +ASI QVH A+ KDG V +KIQ PG+A+ +++D+ +K
Sbjct: 90 EELSSTIDNTFLYFDKTPIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSIIKK 149
Query: 335 LLDYTNLIPKGLYLDSAM--KVAREEL----SRECDYEMEAANQKRFRDVLSNAKGFYVP 388
LL+ T K + D+ + K A +EL ++E D+ E N K+F+ + + K P
Sbjct: 150 LLNIT----KTKFTDALIDPKEAIDELFISTTQELDFINEINNIKKFKKLNEDVKFVRTP 205
Query: 389 YVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKL 428
Y +D +++++ E + GI ID + +L E + +GKKL
Sbjct: 206 YTIDKLCTEKIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKL 247
>sp|B3PH50|UBIB_CELJU Probable ubiquinone biosynthesis protein UbiB OS=Cellvibrio
japonicus (strain Ueda107) GN=ubiB PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ERL A + +K GQ+LS + + LVPA I+ L+ ++ + + +++++ L
Sbjct: 50 ERLRRACEDLGPIFVKFGQLLSTRPD-LVPADIVLELNHLQDNVTPFSKGEFQRIVESSL 108
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQ---NVKI 334
G+ SF+ EP+A+AS+ QVH AV KDG +V +K+ PG+ I DI V
Sbjct: 109 GASVAEVFASFNIEPLASASVAQVHTAVLKDGREVVIKVIRPGIDKVIAQDIALLLRVAR 168
Query: 335 LLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
++ L K L+ ++ R + E D + EAAN + R N+ YVP V +
Sbjct: 169 WVENNTLDGKRLHPVEIVEDYRTTIFDELDLQREAANGSQLRRNFLNSPLLYVPEVYWEY 228
Query: 395 SSKRVLTTELVSGIPIDKVAQLS--QETRNYVGKKLLELTLMELFVFRFMQ 443
+ VL E + GIP+ +A L+ Q + ++ +E+ ++F F
Sbjct: 229 TRTNVLVMERIYGIPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFFH 279
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 190 STKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAP 249
S + + YG+ +++ + ++A RL C RG +K+GQ L D L+P
Sbjct: 56 SLRSVPYGSEEYLQRRSQVHL----RSARRLFELCCANRGTFIKVGQHLGALD-YLLPEE 110
Query: 250 ILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDG 309
+ L ++ A ++ QV+ +LG + SFD P+ AAS+ QVH+AV DG
Sbjct: 111 YTSTLKVLHSQAPQSSMQEVRQVIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDG 170
Query: 310 MQVAMKIQYPGVADSIESDIQNVKIL-LDYTNLIPKGLYLDSAMKVAREELSRECDYEME 368
VA+K+Q+P V DI +++L L L P ++ + A++ L E D+ E
Sbjct: 171 RTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPDFEFM-WLVDEAKKNLPLELDFLNE 229
Query: 369 AANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQ------ETRN 422
N ++ +L + VP + + S+KRVL E V G ++ A + + E
Sbjct: 230 GRNAEKVAHMLRHFDFLKVPQIHWELSTKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISC 289
Query: 423 YVGKKLLELTLMELFV 438
++GK E+ + FV
Sbjct: 290 HLGKMYSEMIFVNGFV 305
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 215 QNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLD 274
++A RL C RG +K+GQ L D L+P + L ++ A ++ QV+
Sbjct: 84 RSARRLCELCCANRGTFIKVGQHLGALD-YLLPEEYTSTLKVLHSQAPQSSMQEIRQVIR 142
Query: 275 AELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKI 334
+LG + SFD P+ AS+ QVH+AV DG VA+K+Q+P V DI +++
Sbjct: 143 EDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEV 202
Query: 335 L-LDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDD 393
L L L P+ ++ + A++ L E D+ E N ++ +L + VP + D
Sbjct: 203 LVLAVKQLFPEFEFM-WLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWD 261
Query: 394 TSSKRVLTTELVSGIPIDKVAQLSQ------ETRNYVGKKLLELTLMELFV 438
S++RVL E V G ++ + + E ++GK E+ + FV
Sbjct: 262 LSTERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFV 312
>sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus
musculus GN=Adck5 PE=2 SV=2
Length = 582
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 190 STKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAP 249
T ++ G + K I + A+ L R G +K+GQ L + L+P
Sbjct: 104 CTNVVLRGVEENSPKYVEIMSACHQRAADALVAGAIRNGGLYVKLGQGLCSFNH-LLPTE 162
Query: 250 ILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDG 309
+ L ++ A +++++ + + FDYEPMAAAS+ QVHRA DG
Sbjct: 163 YIQTLRVLEDKALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDG 222
Query: 310 MQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEA 369
VA+K+QY + D + D+Q +++LL L+ ++ + L +E D+E E
Sbjct: 223 TDVAVKVQYIDLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEG 282
Query: 370 ANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKK 427
N +R L + +P V D SSKRVLT + +G ++ + + + V KK
Sbjct: 283 RNAERCAQELKHFHYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKK 342
Query: 428 LLELTLMELFVFRFMQ 443
L++ ++F F+
Sbjct: 343 LIQTFAEQIFHTGFIH 358
>sp|B2VG47|UBIB_ERWT9 Probable ubiquinone biosynthesis protein UbiB OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=ubiB PE=3
SV=1
Length = 545
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 219 RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELG 278
RL AL ++ +K GQM+S + + L P I L +++ Q ++++ LG
Sbjct: 56 RLRLALEQLGPVWIKFGQMMSTRRD-LFPPHIADQLAMLQDKVAPFDGAQAKKLIEHSLG 114
Query: 279 SDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQNVKILLD 337
+ +S+ FD P+A+ASI QVH A K +G +V +K+ P + I++D++ + L
Sbjct: 115 APVESQFDDFDIVPLASASIAQVHTATLKENGREVVIKVIRPDILPVIKADMKLIYRLAR 174
Query: 338 YT-NLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
+ L+P G L VA E L E + EAAN + R ++ + YVP + D
Sbjct: 175 WVPRLLPDGRRLRPQEVVADYEKTLLDELNLLREAANAIQLRRNFADGQMLYVPEIYSDY 234
Query: 395 SSKRVLTTELVSGIPIDKVAQLSQETRN 422
S+ +L E + GIPI VA L Q N
Sbjct: 235 CSENMLVMERIYGIPISDVATLEQHGVN 262
>sp|A1RP80|UBIB_SHESW Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain W3-18-1) GN=ubiB PE=3 SV=1
Length = 549
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)
Query: 213 SDQNAERLAYALCRMRGAALKIGQMLS-----IQDESLVPAPILAALDIVRQGADVMPRW 267
S ERL A+ + +K+GQMLS + DE + +L D V V+ R
Sbjct: 50 SKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWAIELAMLQ--DKVPPFDGVLAR- 106
Query: 268 QLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIE 326
+ ++AEL + +S FD P+A+ASI QVH A K +G V +K+ P V I
Sbjct: 107 ---KAIEAELKASIESLFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIL 163
Query: 327 SDIQ---NVKILLDYTNLIPKGLYLDSAMKV--AREELSRECDYEMEAANQKRFRDVLSN 381
+D+Q LL+Y + +G L A + R + E + ++EA N + R+ N
Sbjct: 164 ADLQLMSQTANLLEY--FLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAIKLRNNFLN 221
Query: 382 AKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---V 438
+ YVPYV ++ R++ E + GIP+ +A L + N+ KLL +ELF V
Sbjct: 222 SDALYVPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNF---KLLAERGVELFFTQV 278
Query: 439 FR 440
FR
Sbjct: 279 FR 280
>sp|A4Y2Q3|UBIB_SHEPC Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=ubiB PE=3
SV=1
Length = 549
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)
Query: 213 SDQNAERLAYALCRMRGAALKIGQMLS-----IQDESLVPAPILAALDIVRQGADVMPRW 267
S ERL A+ + +K+GQMLS + DE + +L D V V+ R
Sbjct: 50 SKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWAIELAMLQ--DKVPPFDGVLAR- 106
Query: 268 QLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIE 326
+ ++AEL + +S FD P+A+ASI QVH A K +G V +K+ P V I
Sbjct: 107 ---KAIEAELKASIESLFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIL 163
Query: 327 SDIQ---NVKILLDYTNLIPKGLYLDSAMKV--AREELSRECDYEMEAANQKRFRDVLSN 381
+D+Q LL+Y + +G L A + R + E + ++EA N + R+ N
Sbjct: 164 ADLQLMSQTANLLEY--FLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAIKLRNNFLN 221
Query: 382 AKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---V 438
+ YVPYV ++ R++ E + GIP+ +A L + N+ KLL +ELF V
Sbjct: 222 SDALYVPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNF---KLLAERGVELFFTQV 278
Query: 439 FR 440
FR
Sbjct: 279 FR 280
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 115/232 (49%), Gaps = 18/232 (7%)
Query: 224 LC-RMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQ 282
LC + +G +K+ Q+++ D ++P + +L I + A + ++ ++ E G
Sbjct: 251 LCYQNKGIFIKVAQIIASLDH-ILPQEYIKSLSIFQDHAPFVTFEEVEKLFKIETGKHPD 309
Query: 283 SKLTSFDYEPMAAASIGQVHRAVTK----DGMQVAMKIQYPGVADSIESDIQNVKILLDY 338
F+ P+ +AS+ QVH+A K + ++VA+K+QYPG+ + + D+ ++ +L Y
Sbjct: 310 DMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQKDMDSLDNVLTY 369
Query: 339 TNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKR 398
L + A LS+E D+ EA N ++ + + + +P V + ++KR
Sbjct: 370 ITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQLFIGNQQLSIPKVYWNHTTKR 429
Query: 399 VLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLM-------ELFVFRFMQ 443
+LT E + G+ ID ++E + +G L EL + ++FV F+
Sbjct: 430 ILTMEFIHGVRID-----NREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLH 476
>sp|C3LPS7|UBIB_VIBCM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1
Length = 544
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 211 FLSDQNAE-----RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMP 265
+L +Q+A+ RL AL + +K GQM+S + + L P I L +++
Sbjct: 43 WLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRD-LFPPHIADPLAMLQDKVAPFD 101
Query: 266 RWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADS 324
Q Q+++ ELG+ ++ FD +P+A+ASI QVH A K +G V +K+ P +
Sbjct: 102 GLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQ 161
Query: 325 IESDIQNVKILLDYTNLIPKGLYLDSAMK---VARE---ELSRECDYEMEAANQKRFRDV 378
I++DI K++ ++ K L +K V RE L E D EAAN + R
Sbjct: 162 IDADI---KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRN 218
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
N++ YVP V+ D ++ V+ +E + GI + +A L N
Sbjct: 219 FENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
>sp|Q9KVQ4|UBIB_VIBCH Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=ubiB PE=3 SV=1
Length = 544
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 211 FLSDQNAE-----RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMP 265
+L +Q+A+ RL AL + +K GQM+S + + L P I L +++
Sbjct: 43 WLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRD-LFPPHIADPLAMLQDKVAPFD 101
Query: 266 RWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADS 324
Q Q+++ ELG+ ++ FD +P+A+ASI QVH A K +G V +K+ P +
Sbjct: 102 GLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQ 161
Query: 325 IESDIQNVKILLDYTNLIPKGLYLDSAMK---VARE---ELSRECDYEMEAANQKRFRDV 378
I++DI K++ ++ K L +K V RE L E D EAAN + R
Sbjct: 162 IDADI---KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRN 218
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
N++ YVP V+ D ++ V+ +E + GI + +A L N
Sbjct: 219 FENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
>sp|A0L1M6|UBIB_SHESA Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain ANA-3) GN=ubiB PE=3 SV=1
Length = 549
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 23/237 (9%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDI--- 329
+AEL + +S FD P+A+ASI QVH A K +G V +K+ P V I++D+
Sbjct: 110 EAELKAPIESYFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVETKIQADLLLM 169
Query: 330 -QNVKILLDYTNLIPKG--LYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFY 386
Q K++ DY L+ +G L ++ R + E + ++EA N + R+ ++ Y
Sbjct: 170 SQTAKVI-DY--LLGEGNRLRPSEVIEDYRVTILGELNLKLEALNAIKLRNNFLDSDALY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
+PYV ++ R++ E + GIP+ +A L + N+ KLL +ELF VFR
Sbjct: 227 IPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|A5F4G3|UBIB_VIBC3 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=ubiB PE=3 SV=1
Length = 544
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 211 FLSDQNAE-----RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMP 265
+L +Q+A+ RL AL + +K GQM+S + + L P I L +++
Sbjct: 43 WLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRD-LFPPYIADPLAMLQDKVAPFD 101
Query: 266 RWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADS 324
Q Q+++ ELG+ ++ FD +P+A+ASI QVH A K +G V +K+ P +
Sbjct: 102 GLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQ 161
Query: 325 IESDIQNVKILLDYTNLIPKGLYLDSAMK---VARE---ELSRECDYEMEAANQKRFRDV 378
I++DI K++ ++ K L +K V RE L E D EAAN + R
Sbjct: 162 IDADI---KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRN 218
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
N++ YVP V+ D ++ V+ +E + GI + +A L N
Sbjct: 219 FENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
+RL AL + +K GQ+LS + + L+P + +L ++ P Q +++
Sbjct: 52 GDRLRLALEELGPVFVKFGQILSTRRD-LLPDDMAESLKQLQDRVPPFPSEQARGIIEKS 110
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILL 336
LG+ F +PMA+AS+ QVH A +G +V +K+ PG+ I D+ + ++
Sbjct: 111 LGAPVSELFAEFSPDPMASASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDLGLMYLM- 169
Query: 337 DYTNLIPK----GLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYV 390
L+ K G L VA + + E D + EAAN + R N+ Y+P++
Sbjct: 170 --AGLLEKYWSEGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSPLIYIPFI 227
Query: 391 VDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELF 437
D + K VL E + GIPI V L + N + +K +E+ ++F
Sbjct: 228 DWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVF 276
>sp|Q5E8V3|UBIB_VIBF1 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1
Length = 544
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
ERL AL + +K GQM+S + + L P + L +++ ++ E
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTRRD-LFPPHLADQLALLQDQVAPFDGQLAKDQMEME 112
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTKD-GMQVAMKIQYPGVADSIESDIQNVKIL 335
LG + T FD +P+A+ASI QVH A KD G ++ +K+ P + IESDI +++
Sbjct: 113 LGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDI---RLM 169
Query: 336 LDYTNL----IPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPY 389
L IP+ L + E L E D EA+N + R ++ YVP
Sbjct: 170 YRMARLVEQHIPEARRLKPVKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPE 229
Query: 390 VVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLL 429
V+ D SS+ ++ +E + GI + + QL RN KLL
Sbjct: 230 VILDLSSEHLMVSERIYGIQVSDIEQLE---RNGTNMKLL 266
>sp|Q0HZP9|UBIB_SHESR Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain MR-7) GN=ubiB PE=3 SV=1
Length = 549
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 23/237 (9%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDI--- 329
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+
Sbjct: 110 EAELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLM 169
Query: 330 -QNVKILLDYTNLIPKG--LYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFY 386
Q K++ DY L+ +G L ++ R + E + ++EA N + R+ ++ Y
Sbjct: 170 SQTAKVI-DY--LLGEGNRLRPSEVIEDYRVTILGELNLKLEALNAIKLRNNFLDSDALY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
+PYV ++ R++ E + GIP+ +A L + N+ KLL +ELF VFR
Sbjct: 227 IPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A DG +V +K+ P +
Sbjct: 96 EPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDGREVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPCEIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL 416
+ YVP V+ ++++VLT E + GIP D +A L
Sbjct: 214 RFWEASDDIYVPEVIWSHTAEQVLTLERMYGIPSDDIALL 253
>sp|P96936|Y647_MYCTU Uncharacterized protein Rv0647c/MT0675 OS=Mycobacterium
tuberculosis GN=Rv0647c PE=3 SV=1
Length = 488
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 268 QLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIES 327
+++++ ELG + SF+ EP A+ASI QVH A + G +V +KIQ PG+ + +
Sbjct: 143 EVHKLFVEELGDEPARLFASFEEEPFASASIAQVHYATLRSGEEVVVKIQRPGIRRRVAA 202
Query: 328 DIQNVKILLDYTNLIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSNA--- 382
D+Q +K L G L + VA + L+ E D+ +EA + + + L +
Sbjct: 203 DLQILKRFAQTVELAKLGRRLSAQDVVADFADNLAEELDFRLEAQSMEAWVSHLHASPLG 262
Query: 383 KGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF 437
K VP V D +++RVLT E V GI ID A + + + G +L++ L +F
Sbjct: 263 KNIRVPQVHWDFTTERVLTMERVHGIRIDNAAAIRKA--GFDGVELVKALLFSVF 315
>sp|Q0HE99|UBIB_SHESM Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain MR-4) GN=ubiB PE=3 SV=1
Length = 549
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 23/237 (9%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDI--- 329
+ EL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+
Sbjct: 110 ETELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLM 169
Query: 330 -QNVKILLDYTNLIPKG--LYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFY 386
Q KI+ DY L+ +G L ++ R + E + ++EA N + R+ ++ Y
Sbjct: 170 SQTAKII-DY--LLGEGNRLRPSEVIEDYRVTILGELNLKLEALNAIKLRNNFLDSDALY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
+PYV ++ R++ E + GIP+ +A L + N+ KLL +ELF VFR
Sbjct: 227 IPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|Q2NWT9|UBIB_SODGM Probable ubiquinone biosynthesis protein UbiB OS=Sodalis
glossinidius (strain morsitans) GN=ubiB PE=3 SV=1
Length = 544
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPI--LAAL-DIVRQGADVMPRWQLNQVL 273
ERL AL + +K GQMLS + + PA LA L D V+ + R + +
Sbjct: 54 GERLRLALQELGPVWIKFGQMLSTRRDLFPPAIADQLAMLQDRVQPFDGALARAHIER-- 111
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVK 333
+G ++ F EP+A+ASI QVH A K+G +V +K+ P + I++D++ +
Sbjct: 112 --SMGQPLETWFDDFQQEPLASASIAQVHTARLKNGQEVVIKVIRPDILPMIKADMRLMY 169
Query: 334 ILLDYT-NLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYV 390
L + +L+P G L V E L E + EAAN + R + Y+P V
Sbjct: 170 RLASWVPHLLPDGRRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNFDGSPMLYIPEV 229
Query: 391 VDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
D S+ ++ E + G+P++ VA L ++ N
Sbjct: 230 YPDYCSETMMVMERIYGVPVNDVAALEKQGTN 261
>sp|B5FF80|UBIB_VIBFM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain MJ11) GN=ubiB PE=3 SV=1
Length = 544
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
ERL AL + +K GQM+S + + L P + L +++ ++ E
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTRRD-LFPPHLADQLALLQDQVAPFDGQLAKDQMEME 112
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTKD-GMQVAMKIQYPGVADSIESDIQNVKIL 335
LG + T FD +P+A+ASI QVH A KD G ++ +K+ P + IESDI +++
Sbjct: 113 LGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDI---RLM 169
Query: 336 LDYTNL----IPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPY 389
L IP+ L + E L E D EA+N + R ++ YVP
Sbjct: 170 YRMARLVEQHIPEARRLKPVEVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPE 229
Query: 390 VVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
V+ D SS+ ++ +E + GI + + QL + N
Sbjct: 230 VILDLSSEHLMVSERIYGIQVSDIEQLEKNGTN 262
>sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo
sapiens GN=ADCK5 PE=2 SV=2
Length = 580
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 288 FDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLY 347
FDY+P+AAAS+ QVHRA DG VA+K+QY + D + DI +++LL ++
Sbjct: 201 FDYQPIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFG 260
Query: 348 LDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSG 407
++ + L++E D+E E N +R L++ VP V D SSKRVLT + +G
Sbjct: 261 FSWVLQDLKGTLAQELDFENEGRNAERCARELAHFPYVVVPRVHWDKSSKRVLTADFCAG 320
Query: 408 IPIDKVAQLSQE--TRNYVGKKLLELTLMELFVFRFMQ 443
++ V + + + + +KL++ ++F F+
Sbjct: 321 CKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIFYTGFIH 358
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 219 RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELG 278
RL AL R+ +K GQ+LS + + L+P I L ++ P + LG
Sbjct: 52 RLRMALERLGPIFVKFGQVLSTRRD-LIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLG 110
Query: 279 SDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDY 338
+ SFD +P+A+ASI QVH V DG +VA+K+ P V + IE+D+ +++ +
Sbjct: 111 RPIEEVFASFDADPVASASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADLALLRVAAAW 170
Query: 339 T-NLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTS 395
L P G L VA + L E D EAAN + R + +P ++ D S
Sbjct: 171 LERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIWDLS 230
Query: 396 SKRVLTTELVSGIPIDKVAQL 416
S VL E + G+PI ++ L
Sbjct: 231 SAEVLVMERMHGVPISQIETL 251
>sp|A1SAK0|UBIB_SHEAM Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiB PE=3
SV=1
Length = 549
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
ERL A+ + +K GQMLS + + L+ L +++ + ++AE
Sbjct: 54 GERLKLAMQELGPVYIKFGQMLSTRRD-LLSDEWAQELSMLQDRVPAFDSALAREAIEAE 112
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQNVKIL 335
L + S FD P+A+ASI QVH A K +G QV +K+ P V +I++D++ + +
Sbjct: 113 LKAPIDSLFDDFDDTPLASASISQVHTATLKSNGQQVVLKVLRPNVEANIKADLELMLQV 172
Query: 336 LDYTN-LIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVD 392
+ N L+ +G L V + + E + ++EA N + R+ ++ Y+PYV +
Sbjct: 173 ATWVNRLLGEGNRLRPVEVVEDYQNTILGELNLKLEALNATKLRNNFLDSDALYIPYVYE 232
Query: 393 DTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
+ R++ E + GIP+ + L+ + N KLL +ELF VFR
Sbjct: 233 ELCHPRLMVMERIDGIPVSDIEALNAQGTNL---KLLAERGVELFFTQVFR 280
>sp|A9KYL6|UBIB_SHEB9 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS195) GN=ubiB PE=3 SV=1
Length = 549
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQ-- 330
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+Q
Sbjct: 110 EAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLM 169
Query: 331 -NVKILLDYTNLIPKGLYLDSAMKV--AREELSRECDYEMEAANQKRFRDVLSNAKGFYV 387
L++Y L+ +G L A + R + E + ++EA N + R+ ++ YV
Sbjct: 170 SQTAKLIEY--LLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAVKLRNNFLDSDALYV 227
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
PYV ++ R++ E + GI + +A L + N+ KLL +ELF VFR
Sbjct: 228 PYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|A6WIE7|UBIB_SHEB8 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS185) GN=ubiB PE=3 SV=1
Length = 549
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQ-- 330
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+Q
Sbjct: 110 EAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLM 169
Query: 331 -NVKILLDYTNLIPKGLYLDSAMKV--AREELSRECDYEMEAANQKRFRDVLSNAKGFYV 387
L++Y L+ +G L A + R + E + ++EA N + R+ ++ YV
Sbjct: 170 SQTAKLIEY--LLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAVKLRNNFLDSDALYV 227
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
PYV ++ R++ E + GI + +A L + N+ KLL +ELF VFR
Sbjct: 228 PYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 8/236 (3%)
Query: 212 LSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQ 271
L + A+RL + + G +K+GQ++++Q +L P A + A + +L
Sbjct: 105 LHQRVAQRLFKTIYKNGGLYIKMGQIIAMQSNNL-PEAYGKAFQGMFDNAPQVEWEELQD 163
Query: 272 VLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQN 331
+ + G + S + A+ASI QVHRAV G +VA+KIQ P VA + D+
Sbjct: 164 IFKEQYGRPVEEVFASIEKRAAASASIAQVHRAVLPSGEKVAVKIQKPDVAKQMSWDLLV 223
Query: 332 VKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNA----KGFYV 387
K ++ + + L + E L E D+ EA N + R+ + Y+
Sbjct: 224 YKYMMYVYDKWIFHIPLYFTVDYVSERLRSEVDFTTEANNSEHAREGVEETDYLRDKIYI 283
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQ 443
P V + S KRV+ TE GIP+ LS+ + KK + L F+
Sbjct: 284 PKVYKEISGKRVMVTEWADGIPLYDQTALSEAG---MSKKEILTNLFRFLAFQMFH 336
>sp|A3D9F4|UBIB_SHEB5 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=ubiB PE=3 SV=1
Length = 549
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQ-- 330
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+Q
Sbjct: 110 EAELKAPIESLFDDFNEIPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLM 169
Query: 331 -NVKILLDYTNLIPKGLYLDSAMKV--AREELSRECDYEMEAANQKRFRDVLSNAKGFYV 387
L++Y L+ +G L A + R + E + ++EA N + R+ ++ YV
Sbjct: 170 SQTAKLIEY--LLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAVKLRNNFLDSDALYV 227
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
PYV ++ R++ E + GI + +A L + N+ KLL +ELF VFR
Sbjct: 228 PYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|B8E6B4|UBIB_SHEB2 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS223) GN=ubiB PE=3 SV=1
Length = 549
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQ-- 330
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+Q
Sbjct: 110 EAELKAPIESLFDDFNEIPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLM 169
Query: 331 -NVKILLDYTNLIPKGLYLDSAMKV--AREELSRECDYEMEAANQKRFRDVLSNAKGFYV 387
L++Y L+ +G L A + R + E + ++EA N + R+ ++ YV
Sbjct: 170 SQTAKLIEY--LLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAVKLRNNFLDSDALYV 227
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
PYV ++ R++ E + GI + +A L + N+ KLL +ELF VFR
Sbjct: 228 PYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNF---KLLAERGVELFFTQVFR 280
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 204 KQAAISPFLSDQNA---ERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAALDIVR 258
K + P D +A +R+ AL + +K GQ+LS + + L P A LA L
Sbjct: 33 KLFGLCPVRRDTSAPLPQRVRLALESLGPIFVKFGQVLSTRRDLLPPEYADELALLQ--- 89
Query: 259 QGADVMPRWQ---LNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKD-----GM 310
D +P + QV++ LG + FD +P+A+AS+ QVH+A + G
Sbjct: 90 ---DRVPPFDGDIARQVVERSLGRKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGR 146
Query: 311 QVAMKIQYPGVADSIESDIQNVKILLDYT-NLIPKGLYLDSAMKVAR--EELSRECDYEM 367
+VA+K+ PG+ IE D+ ++ L + L G L VA + L E D
Sbjct: 147 EVAVKVLRPGILPVIEQDLSLMRTLAGWVEKLFADGKRLKPREVVAEFDKYLHDELDMMH 206
Query: 368 EAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQ 418
EAAN + R + VP V D SS+ VLT E + GIP+ ++ +L +
Sbjct: 207 EAANASQLRRNFKGSDMLIVPEVFYDYSSREVLTLEWMHGIPVGQIERLRE 257
>sp|Q088I0|UBIB_SHEFN Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
frigidimarina (strain NCIMB 400) GN=ubiB PE=3 SV=1
Length = 549
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 23/237 (9%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
AERL A+ + +K+GQMLS + + L A LA L D V + R + +
Sbjct: 54 AERLKLAMQDLGPVYIKLGQMLSTRRDLLDDEWAYQLAMLQDRVPPFDSALAR----EAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQNV 332
+AELG+ + F+ P+A+ASI QVH A K +G V +K+ P V I +D+Q
Sbjct: 110 EAELGAPIATYFDDFNDTPLASASISQVHTATLKSNGKAVVLKVLRPNVEQQILADLQ-- 167
Query: 333 KILLDYTNLIPKGLYLDSAMKVA------REELSRECDYEMEAANQKRFRDVLSNAKGFY 386
++ NL+ L + ++ A R + E + ++EA N + R+ + Y
Sbjct: 168 -LMTQTANLLETLLGDGNRLRPAEVIEDYRTTILGELNLKLEALNAIKLRNNFLGSNSLY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR 440
VP+V ++ S +R++ E + GIP+ L + N+ KLL +ELF VFR
Sbjct: 227 VPFVYEEHSYQRLMVMERIYGIPVSDTEALRAQGTNF---KLLAERGVELFFTQVFR 280
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A D +V +K+ P +
Sbjct: 96 EPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRREVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPREIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL 416
+ YVP V+ +++RVLT E + GIP D +A L
Sbjct: 214 RFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALL 253
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A D V +K+ P +
Sbjct: 96 EPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPREIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL 416
+ YVP V+ +++RVLT E + GIP D +A L
Sbjct: 214 RFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALL 253
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A D V +K+ P +
Sbjct: 96 EPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPREIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL 416
+ YVP V+ +++RVLT E + GIP D +A L
Sbjct: 214 RFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALL 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,049,584
Number of Sequences: 539616
Number of extensions: 6470010
Number of successful extensions: 22523
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 22036
Number of HSP's gapped (non-prelim): 233
length of query: 475
length of database: 191,569,459
effective HSP length: 121
effective length of query: 354
effective length of database: 126,275,923
effective search space: 44701676742
effective search space used: 44701676742
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)