BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011924
(475 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.03 PE=4 SV=2
Length = 426
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 176/403 (43%), Gaps = 54/403 (13%)
Query: 64 DIQGIPWERLSI-TREKYRQTRLEQYKNYENIPN-SGEGSGKDCKVTKKGASYYEFRRNS 121
D QGIPW +I R+ +R RL Y N + S E D S+YEF+R
Sbjct: 66 DFQGIPWGNKAIGKRKNFRLYRLHTYSLSCNHSDWSPEELSLDTVQVAAEDSFYEFQRFL 125
Query: 122 RSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPG 181
++ H L V +H V +S+ S+ ++L + Q++++ ++
Sbjct: 126 KNPNCLRNHHHLCKSVKVVGEHSVIYVSNNSIRMENTLHDNSVQIIDLKNNI-------- 177
Query: 182 SLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIY 241
+ +S L + + G G+ C + G SF +R DD+ N ++++
Sbjct: 178 -----LQKKAISCLDTTNAVGCLGTLYGQY-CIFNFKNG-SFSTRKLSDDS--INHIQLF 228
Query: 242 GSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKV 301
F ND V D+ + +R VN
Sbjct: 229 SEKK----FILGCNDGAVYVEDVQRTSPILVYRCSNAVN--------------------- 263
Query: 302 IICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVT 361
C+Q ++P L ++ D+ D +L+D + A L H D +WHPNG
Sbjct: 264 -----CVQLFDETP---LALVCTDSKDAMLIDIRSNSVSAKL-PHSDSVLTGSWHPNGNI 314
Query: 362 FATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421
ATG QD T ++WD+R L +S L + A+ ++ ++ G +A E ADFV ++D K
Sbjct: 315 LATGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL 374
Query: 422 GYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGR 464
+ Q IDFFGEI+G ++S +SLFIGV D G +LE+ R
Sbjct: 375 -FNTSQVIDFFGEIAGTAYSSSGDSLFIGVDDPMLGGILEFRR 416
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 303 ICLLCLQHSSQ------SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWH 356
+ L+C HS+ SPDG++L G + + L G I +L GH F+ A+H
Sbjct: 676 LLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFH 735
Query: 357 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHV 416
P+G T A+ + DKT ++WD+++ + L G+ +R + ++ DG +A++ + +
Sbjct: 736 PDGETLASASGDKTIKLWDIQD-GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKL 794
Query: 417 YDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+DV G G + ++FS D ++L G DRT
Sbjct: 795 WDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRT 833
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG+LL + L D TG+ + L GH + +++ + PNG AT + D+T +I
Sbjct: 1071 SPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKI 1130
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD + + + L G+ + I ++ DG+ +A+A V ++DV +G I
Sbjct: 1131 WDWQQ-GKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTH 1189
Query: 434 EISGISFSPDTESLFIG-------VWDRTYGSLLEYGRCR 466
+S ++FSPD E + G +W+ G L+ R +
Sbjct: 1190 LVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQILRAK 1229
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 315 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 374
PDG+ L + L D G + +L GH D+ A+ P+G T A+ D T ++W
Sbjct: 736 PDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLW 795
Query: 375 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE 434
D+ + + LK + G +RS+ +++DG+ +A+ + +++ +G + I
Sbjct: 796 DVSQ-GKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNS 854
Query: 435 ISGISFSPDTESLFIGVWDRT 455
+ I++SPD++ L G DRT
Sbjct: 855 VYSIAYSPDSKILVSGSGDRT 875
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPD ++L ++ L D TGK I+SL GH DF + A+ P+ T A+ + D + R+
Sbjct: 945 SPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRL 1004
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W++ + + +L + + ++ + G+ +AT V ++++ +G + +
Sbjct: 1005 WNI-STGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSD 1063
Query: 434 EISGISFSPDTESL 447
+I G+++SPD + L
Sbjct: 1064 KILGMAWSPDGQLL 1077
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG+ L V + L + TG+ + + G+ D++ A+ P+ A+G+ DKT ++
Sbjct: 903 SPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKL 962
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD + + ++ L+G+ I I ++ D + +A+A V ++++ +G + ++
Sbjct: 963 WDWQT-GKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTD 1021
Query: 434 EISGISFSPDTESLFIG-------VWDRTYGSLLE 461
+ + F P + + G +W+ + G L+
Sbjct: 1022 WVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK 1056
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPD K+L+ + L D T I +L GH + + A+ P+G T A + D++ R+
Sbjct: 861 SPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRL 920
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY---EKEQEID 430
W+ R + + GN + ++ D + +A+ V ++D ++G E D
Sbjct: 921 WNCRT-GQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTD 979
Query: 431 FFGEISGISFSPDTESL 447
F I GI+FSPD+++L
Sbjct: 980 F---IYGIAFSPDSQTL 993
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG L + L D GK + +L H + + A+ +G T A+G+ D+T +I
Sbjct: 777 SPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKI 836
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W+ E + G+ ++ SI Y+ D + + + + ++D ++ +
Sbjct: 837 WNYHT-GECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTN 895
Query: 434 EISGISFSPDTESL 447
E+ ++FSPD ++L
Sbjct: 896 EVCSVAFSPDGQTL 909
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+G+LL + + + +GK + GH ++ + P+G A+ D+ ++
Sbjct: 651 SPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKL 710
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W +R+ + L G+ + S+ + DG +A+A + ++D++ G +
Sbjct: 711 WSVRD-GVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTD 769
Query: 434 EISGISFSPDTESLF-------IGVWDRTYGSLL 460
+ ++FSPD +L I +WD + G L
Sbjct: 770 WVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCL 803
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 351 FASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP 410
++A+ P G AT + D R+W++++ + + + +G+ +R + ++ DG +A+
Sbjct: 646 LSAAFSPEGQLLATCDTDCHVRVWEVKS-GKLLLICRGHSNWVRFVVFSPDGEILASCGA 704
Query: 411 ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRTYGSLLE-- 461
+ V ++ V+ G + E+ ++F PD E+L I +WD G+ L+
Sbjct: 705 DENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTL 764
Query: 462 -----YGRCRNYS 469
+ RC +S
Sbjct: 765 TGHTDWVRCVAFS 777
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 283 SSYCIILLCRLLNFMTEKVIIC-LLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA 341
S+ C I + R+ +F+ EK ++ L + S S D KL++ D+ + D +G+ +
Sbjct: 126 SADCSIKIWRM-DFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVK 184
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH ++ F ++P+G A+G+ D+T RIW RN ++ + G+ + S+ + D
Sbjct: 185 TLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARN-GNTIFSIPGHEDPVSSVCFNRD 243
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEID-FFGEISGISFSPDTESLFIGVWDRTYGSLL 460
G Y+A+ V ++D +G + ID I+ + FSP+ + + + T L
Sbjct: 244 GAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTL-KLW 302
Query: 461 EYGRCR 466
+Y + R
Sbjct: 303 DYQKLR 308
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 311 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 370
S+ SPDG+ L+ D+ + + +G+ + L GH + + P+G A+ + D +
Sbjct: 32 SAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHS 91
Query: 371 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R+WD+ S+ + VLKG+ ++ ++ ++ D + +A+ V++V+SG +
Sbjct: 92 IRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVG 150
Query: 431 FFGEISGISFSPDTESLFIGVWDRT 455
I FSP ++SL G WD T
Sbjct: 151 HCDSIQSSDFSPTSDSLATGSWDST 175
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 312 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
S SPD K L G + ++ + +G+ + L GH D +S + P + ATG+ D T
Sbjct: 117 SFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTV 176
Query: 372 RIWDLRNLSESVAV--LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 429
IWDLR + V+ L+G+ G I + Y++ G +A+ + V+ + Q
Sbjct: 177 HIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLK 235
Query: 430 DFFGEISGISFSPDTESLF-------IGVWDRTYGSLLE 461
++ ++FSPD L + VWD G LE
Sbjct: 236 GHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLE 274
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG+ + D+ + D+++G +L GH D ++ A+ P+G A+G+ D T +I
Sbjct: 1060 SPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKI 1119
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD + L+G+ G + S+ ++ DG+ +A+ + ++D SG + G
Sbjct: 1120 WDAAS-GTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGG 1178
Query: 434 EISGISFSPDTESLFIGVWDRT 455
+ ++FSPD + + G D+T
Sbjct: 1179 WVQSVAFSPDGQRVASGSSDKT 1200
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 308 LQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 367
+Q + SPDG+ + D+ + D+ +G +L GH + A+ P+G A+G+
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG 987
Query: 368 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 427
DKT +IWD + L+G+ G++ S+ ++ DG+ +A+ + ++D SG +
Sbjct: 988 DKTIKIWDTAS-GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQT 1046
Query: 428 EIDFFGEISGISFSPDTESLFIG-------VWDRTYGS 458
G + + FSPD + + G +WD G+
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGT 1084
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 314 SPDGKLLIIVGDNPDGLLV--DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
SPDG+ + + DG + D+ +G +L GH + + A+ P+G A+G+ D T
Sbjct: 1102 SPDGQR--VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTI 1159
Query: 372 RIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 431
+IWD + L+G+ G ++S+ ++ DG+ +A+ + ++D SG +
Sbjct: 1160 KIWDAAS-GTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGH 1218
Query: 432 FGEISGISFSPDTESLFIG-------VWDRTYGSLLE------YGRCRNYSYLDSLI 475
G + ++FSPD + + G +WD G+ + C ++ Y ++ I
Sbjct: 1219 GGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTLNVGSTATCLSFDYTNAYI 1275
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S DG+ + D+ + D+ +G +L GH ++ A+ P+ A+G+ DKT +I
Sbjct: 850 SADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKI 909
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD + L+G+ G ++S+ ++ DG+ +A+ + ++D SG +
Sbjct: 910 WDAAS-GTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGS 968
Query: 434 EISGISFSPDTESLFIGVWDRT 455
+ ++FSPD + + G D+T
Sbjct: 969 SVLSVAFSPDGQRVASGSGDKT 990
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH + A+ +G A+G+ DKT +IWD + L+G+ G++ S+ ++ D
Sbjct: 836 TLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTAS-GTGTQTLEGHGGSVWSVAFSPD 894
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
+A+ + ++D SG + G + ++FSPD + + G +WD
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDA 954
Query: 455 TYGS 458
G+
Sbjct: 955 ASGT 958
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 308 LQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 367
+Q + SPDG+ + + + D+ +G +L GH + + A+ P+G A+G+
Sbjct: 1180 VQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS 1239
Query: 368 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS 400
D T +IWD + + + + G+ S YT+
Sbjct: 1240 DNTIKIWDTASGTCTQTLNVGSTATCLSFDYTN 1272
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
GHL +HPN TG+ DKTCR+WD+ SV V G+ + ++ DG
Sbjct: 459 FAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR-GHSVRVFNGHTQPVTAVAIAPDG 517
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 450
MA+A+ +H++D+ +G + G I +SFS ++ L G
Sbjct: 518 HTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSG 565
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
L H + + + P+ + ++D + R+W + + VA KG+ G + + + G
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVA-YKGHTGPVWDVAFGPFG 433
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
Y ATA ++ Y ++ ++F P++ + G D+T
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKT 486
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L D G ++ GH A A P+G T A+ + + +WD+ + ++G+
Sbjct: 489 LWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI-GTGRRIKTMRGHR 547
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDV-KSGYEKEQEIDFFGEI 435
G I S+ ++ + + + V +DV K+ Y G +
Sbjct: 548 GNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSV 593
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG +L + L +GK + +L GH ++ + + P+G A+G+ D+T R+
Sbjct: 1377 SPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRL 1436
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
W++ + E + L G++ ++RS+ ++SDG +A+ + + ++DVK+G
Sbjct: 1437 WNISS-GECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTG 1484
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 307 CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 366
C++ SPDG +L GD+ L D +G + +L G+ + + PNGVT A G+
Sbjct: 1076 CVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGS 1135
Query: 367 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 426
D+ R+WD+ + + + L+G+ + ++ ++ DG +A+ V ++D+ S
Sbjct: 1136 SDQIVRLWDISS-KKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLY 1194
Query: 427 QEIDFFGEISGISFSPDTESLFIGVWDRT 455
++ + F+PD +L G D+T
Sbjct: 1195 ILQGHTSWVNSVVFNPDGSTLASGSSDQT 1223
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 290 LCRLLNFMTEKVIICLLCLQHSSQ-------SPDGKLLIIVGDNPDGLLVDSMTGKTIAS 342
+ RL + ++K CL LQ + SPDG L + L D + K +
Sbjct: 1139 IVRLWDISSKK---CLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYI 1195
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
L GH + + ++P+G T A+G+ D+T R+W++ N S+ + +G+ + S+ + DG
Sbjct: 1196 LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEI-NSSKCLCTFQGHTSWVNSVVFNPDG 1254
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+A+ V ++D+ S ++ ++F+PD L G D+T
Sbjct: 1255 SMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQT 1307
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+ +L + L D +G+ + GH + ++ A++ +G ATG+ D+T R+
Sbjct: 957 SPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRL 1016
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD+ + S+ + +G+ +RS+ ++SDG +A+ V ++D+ SG
Sbjct: 1017 WDISS-SQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS 1075
Query: 434 EISGISFSPDTESL-------FIGVWDRTYGSLL 460
+ + FSPD L + +WD + G+ L
Sbjct: 1076 CVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCL 1109
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 305 LLCLQHSSQ------SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPN 358
L C H+S S DGK+L D+ L D +G+ + + GH + + PN
Sbjct: 900 LTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPN 959
Query: 359 GVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 418
+ A+G+ D+T R+WD+ + E + + +G+ G + S+ + DG +AT V ++D
Sbjct: 960 SLMLASGSSDQTVRLWDISS-GECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWD 1018
Query: 419 VKS 421
+ S
Sbjct: 1019 ISS 1021
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+PDG +L + L D + K + + GH ++ + A++P+G A+G+ D+T R+
Sbjct: 1251 NPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRL 1310
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W++ + S+ + +G+ + S+ ++ DG +A+ V ++ + SG E F G
Sbjct: 1311 WEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG---ECLYTFLG 1366
Query: 434 E---ISGISFSPDTESLFIGVWDRT 455
+ + FSPD L G D+T
Sbjct: 1367 HTNWVGSVIFSPDGAILASGSGDQT 1391
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 307 CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 366
C++ S DG +L D+ L D +G + +L GH + + P+G A+G
Sbjct: 1034 CVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGG 1093
Query: 367 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG---Y 423
D+ R+WD+ + + L+G +R + ++ +G +A V ++D+ S Y
Sbjct: 1094 DDQIVRLWDISS-GNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLY 1152
Query: 424 EKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+ ++ ++ ++FSPD +L G D+T
Sbjct: 1153 TLQGHTNW---VNAVAFSPDGATLASGSGDQT 1181
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 314 SPDGKLLIIVGDNPDGLLV---DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 370
SPDGKL GD+ G +V ++ TGK + + GH + + + +G A+G+ D+T
Sbjct: 873 SPDGKLFA-TGDS--GGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQT 929
Query: 371 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R+WD+ + + + KG+ +RS+ ++ + +A+ V ++D+ SG
Sbjct: 930 VRLWDISS-GQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQG 988
Query: 431 FFGEISGISFSPDTESLFIGVWDRT 455
G + ++F+ D L G D+T
Sbjct: 989 HTGWVYSVAFNLDGSMLATGSGDQT 1013
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG +L D+ L +G+ + + GH ++ + + P+G A+G+ D+T R+
Sbjct: 1335 SPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRL 1394
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
W + + + + L+G+ + SI ++ DG +A+ V ++++ SG
Sbjct: 1395 WSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSG 1442
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 354 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 413
A+ P+G FATG+ R W+ E + KG+ + S+ ++ DG+ +A+
Sbjct: 871 AFSPDGKLFATGDSGGIVRFWEAATGKE-LLTCKGHNSWVNSVGFSQDGKMLASGSDDQT 929
Query: 414 VHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
V ++D+ SG + + + FSP++ L G D+T
Sbjct: 930 VRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQT 971
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 304 CLLCLQHSSQ-------SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWH 356
CL LQ + SPDG LL D+ L + +G+ + +L GH++ + A+
Sbjct: 1402 CLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFS 1461
Query: 357 PNGVTFATGNQDKTCRIWDLRNLSESVAVLK 387
+G+ A+G+ D+T ++WD++ E + LK
Sbjct: 1462 SDGLILASGSDDETIKLWDVKT-GECIKTLK 1491
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L D K + +L GH + +HP G FA+G+ D +IWD+R + KG+
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG-CIHTYKGHT 143
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 450
+ +R+T DGR++ + + V V+D+ +G + G+I + F P L G
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 451 VWDRT 455
DRT
Sbjct: 204 SADRT 208
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+PDG+ ++ G++ + D GK + H + +HP+ ATG+ D+T +
Sbjct: 152 TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKF 211
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM 405
WDL E + +R + + DG+ +
Sbjct: 212 WDLETF-ELIGSGGPETAGVRCLSFNPDGKTV 242
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 340 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYT 399
I SL GH + + + V A G T ++WDL ++ V L G+ S+ +
Sbjct: 52 ILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE-AKIVRTLTGHRSNCISVDFH 110
Query: 400 SDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS---FSPD-------TESLFI 449
G + A+ + ++D++ +K + G G++ F+PD E +
Sbjct: 111 PFGEFFASGSLDTNLKIWDIR---KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 450 GVWDRTYGSLL 460
VWD T G LL
Sbjct: 168 KVWDLTAGKLL 178
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 311 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 370
S+ SPDG++L+ ++ ++ +G+ + L GH + P+G FA+ + D T
Sbjct: 27 SAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCT 86
Query: 371 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R+WD+ ++ + VLKG+ ++ ++ ++ D R +A+ V ++DV+SG +
Sbjct: 87 VRLWDVAR-AKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVG 145
Query: 431 FFGEISGISFSPDTESLFIGVWDRT 455
I FSP L G WD T
Sbjct: 146 HRDSIQSSDFSPTVNCLATGSWDST 170
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPD + L G + +L D +G+ + L GH D +S + P ATG+ D T I
Sbjct: 114 SPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHI 173
Query: 374 WDLRNLSESVA--VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 431
WDLR ++ +V+ L+G+ I + Y++ G +A+ +H++ + Q
Sbjct: 174 WDLRMVTPAVSHQALEGHSANISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGH 232
Query: 432 FGEISGISFSPDTESL-------FIGVWDRTYGSLLE 461
+ I+FSPD L + VWD G LE
Sbjct: 233 VTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLE 269
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 352 ASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA 411
+SA+ P+G TG++D W+ R+ + + L G+ G ++ R++ DG A+A
Sbjct: 26 SSAFSPDGQMLLTGSEDGCVYGWETRS-GQLLWRLGGHTGPVKFCRFSPDGHLFASASCD 84
Query: 412 DFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 454
V ++DV + +SFSPD+ L G WD+
Sbjct: 85 CTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK 127
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 336 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 395
T + L GH+ + + A+ P+ + A+ + ++WD N + + LKG L +
Sbjct: 222 TSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC-NTGKCLETLKGVLDVAHT 280
Query: 396 IRYTSDGRYMATA 408
+T DG+ + +
Sbjct: 281 CAFTPDGKILVSG 293
>sp|Q9USR0|CKN1_SCHPO DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ckn1 PE=1 SV=1
Length = 404
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLK-- 387
L D +G SL GH A W P N A+G+ D TCR+WD+R +S S A +
Sbjct: 173 LCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMDLH 232
Query: 388 -----------GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI 435
+ G + + +TSD RY+A+ D + V++++SG +E FG I
Sbjct: 233 NKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLRE---FGPI 288
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG ++ + L + TG A L GH D+ +A A+ P+G A+G++D T R+
Sbjct: 552 SPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRL 611
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG---YEKEQEID 430
WD+ E VL+ + S+ ++ DG + VH++DV SG + E D
Sbjct: 612 WDVATGKER-DVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASGEALHTFEGHTD 669
Query: 431 FFGEISGISFSPDTESLFIGVWDRT 455
+ + ++FSPD L G DRT
Sbjct: 670 W---VRAVAFSPDGALLASGSDDRT 691
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 333 DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGA 392
D +G + +L GH D+ A A+ P+G A+G+ D T R+WD+ +E AV +G+
Sbjct: 487 DVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDV-AAAEERAVFEGHTHY 545
Query: 393 IRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 452
+ I ++ DG +A+ +++V +G E + ++FSPD + G
Sbjct: 546 VLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSR 605
Query: 453 DRT 455
D T
Sbjct: 606 DGT 608
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG +L+ G + L D +G+ + + GH D+ A A+ P+G A+G+ D+T R+
Sbjct: 636 SPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRL 694
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421
WD+ E L+G+ + S+ + +G +A+A + ++ + +
Sbjct: 695 WDVAAQEEHT-TLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPIAT 741
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 350 SFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE 409
+ A A+ P G A G+ DK +WD+ + E + L+G+ +R++ ++ DG +A+
Sbjct: 462 AVAVAFSPGGSLLAGGSGDKLIHVWDVASGDE-LHTLEGHTDWVRAVAFSPDGALLASGS 520
Query: 410 PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
V ++DV + E+ + I+FSPD + G D T
Sbjct: 521 DDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGT 566
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK++ + L DS +G I SL H D ++ ++P+G A+ + DKT ++
Sbjct: 1497 SPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKL 1556
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W + + G+ + S ++ DGRY+A+A V ++ + G
Sbjct: 1557 WRSHD-GHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAG 1615
Query: 434 EISGISFSPDTESLFIGVWDRT 455
+S I FSPD ++L G D T
Sbjct: 1616 VMSAI-FSPDGKTLISGSLDTT 1636
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 316 DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 375
DG ++ G + + L S G + +L G+ + ++ P G A+ N DKT +IW
Sbjct: 1374 DGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAI-YGISFTPQGDLIASANADKTVKIWR 1432
Query: 376 LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI 435
+R+ +++ L G+ + + ++ DG+ +A+A + V +++V G K+ E+
Sbjct: 1433 VRD-GKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEV 1491
Query: 436 SGISFSPDTESLF-------IGVWDRTYGSLLE 461
+SFSPD + + I +WD G+L++
Sbjct: 1492 FWVSFSPDGKIIASASADKTIRLWDSFSGNLIK 1524
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 334 SMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 393
S G+ +L GH D ++ ++ P+G T A+G DKT ++W + + + G+ +
Sbjct: 1100 SRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSD-GTLLKTITGHEQTV 1158
Query: 394 RSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG--- 450
++ ++ DG+ +A+A + ++D SG + + FSPD +++ G
Sbjct: 1159 NNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSED 1218
Query: 451 ----VWDRTYGSLLE 461
+W R G LL+
Sbjct: 1219 KTVKLWHRQDGKLLK 1233
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L + L D+ +G+ + +L GH + P+G T A G++DKT ++
Sbjct: 1164 SPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKL 1223
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W R + + L G+ + S+ ++ DG+ +A+A + ++ + G +
Sbjct: 1224 WH-RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHND 1282
Query: 434 EISGISFSPDTESLF-------IGVWDR 454
+ ++FS D +++ I +W+R
Sbjct: 1283 SVWDVNFSSDGKAIASASRDNTIKLWNR 1310
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L + L + GK +L GH D F ++ P+G A+ + DKT R+
Sbjct: 1455 SPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRL 1514
Query: 374 WD--LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 431
WD NL +S L + + S+ + DG +A+ V ++ G+
Sbjct: 1515 WDSFSGNLIKS---LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGH 1571
Query: 432 FGEISGISFSPD 443
+ SFSPD
Sbjct: 1572 SNVVYSSSFSPD 1583
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
L GH D + + +G T A+G+ DKT ++W R+ L G+ A+ S+ ++ DG
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWS-RD-GRLFRTLNGHEDAVYSVSFSPDG 1125
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRT 455
+ +A+ + ++ G + ++ + FSPD ++L I +WD T
Sbjct: 1126 QTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTT 1185
Query: 456 YGSLL 460
G LL
Sbjct: 1186 SGQLL 1190
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L + L GK + +L GH D + + +G A+ ++D T ++
Sbjct: 1248 SPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKL 1307
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 417
W+ + + G+ G + ++ + D +A+A + + ++
Sbjct: 1308 WNRHGI--ELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLW 1349
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 320 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
LI+ G + V D K + +L GH + +HP G A+G+QD ++WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
V +G+ A+R +R++ DG+++A+A V ++D+ +G + G ++ +
Sbjct: 137 -KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 439 SFSPDTESLFIGVWDRT 455
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSSDRT 212
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L D+ L D GK ++ GH +HPN A+G+ D+T R
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF 215
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-- 431
WDL + V+ ++G G +RS+ + DG + + D + VY G+E E+ D
Sbjct: 216 WDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCLYSGC-QDSLRVY----GWEPERCFDVVL 269
Query: 432 --FGEISGISFSPDTESLFIGV 451
+G+++ ++ D IGV
Sbjct: 270 VNWGKVADLAICNDQ---LIGV 288
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 320 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
LI+ G + V D K + +L GH + +HP G A+G+QD ++WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
V +G+ A+R +R++ DG+++A+A V ++D+ +G + G ++ +
Sbjct: 137 -KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 439 SFSPDTESLFIGVWDRT 455
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSSDRT 212
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L D+ L D GK ++ GH +HPN A+G+ D+T R
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF 215
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-- 431
WDL + V+ ++G G +RS+ + DG + + D + VY G+E E+ D
Sbjct: 216 WDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCLYSGC-QDSLRVY----GWEPERCFDVVL 269
Query: 432 --FGEISGISFSPDTESLFIGV 451
+G+++ ++ D IGV
Sbjct: 270 VNWGKVADLAICNDQ---LIGV 288
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 320 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
LI+ G L V D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRR 136
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
V KG+ A+R +R++ DG+++A+A V ++D+ +G + + G ++ I
Sbjct: 137 -KGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 439 SFSPDTESLFIGVWDRT 455
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSADRT 212
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L D+ L D GK +A L H +HPN A+G+ D+T R
Sbjct: 156 SPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRF 215
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
WDL + + +G +R+I ++SDG + D + VY G+E +Q D
Sbjct: 216 WDLEKF-QLIGCTEGETIPVRAILFSSDGGCIFCGG-RDALRVY----GWEPDQCFD 266
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 320 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
LI+ G L + D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRR 136
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
V KG+ A+R +R++ DG+++A+A V ++D+ +G + + G ++ I
Sbjct: 137 -KGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 439 SFSPDTESLFIGVWDRT 455
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSADRT 212
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L D+ L D GK +A L H +HPN A+G+ D+T R
Sbjct: 156 SPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRF 215
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-- 431
WDL + V +G +R+I +++DG + D + VY G+E +Q D
Sbjct: 216 WDLEKF-QLVGCTEGETIPVRAILFSNDGGCIFCGG-KDSLRVY----GWEPDQCFDTVP 269
Query: 432 --FGEISGISF 440
+G++S ++
Sbjct: 270 VGWGKVSDLAI 280
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
GHL+ ++HPNG TG+ DKTCR+WD+ + +SV + G+ + SI DG
Sbjct: 605 FAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV-STGDSVRLFLGHTAPVISIAVCPDG 663
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGE--ISGISFSPDTESLFIGVWDRT 455
R+++T ++V+D+ +G ++ +++ G+ I +S+S + L G D T
Sbjct: 664 RWLSTGSEDGIINVWDIGTG-KRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHT 717
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 311 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 370
+S SPD K L+ ++ L T + S GH + ++ P G FAT + D+T
Sbjct: 531 TSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQT 590
Query: 371 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R+W ++ + + G+L + + + +G Y+ T ++DV +G +
Sbjct: 591 ARLWSCDHIY-PLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLG 649
Query: 431 FFGEISGISFSPD-------TESLFIGVWDRTYGSLLEYGRCRNYSYLDSL 474
+ I+ PD +E I VWD G L+ R + + SL
Sbjct: 650 HTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSL 700
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 339 TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRY 398
T +L GH +++++ P+ +G++DKT R+W + + ++ KG+ + + +
Sbjct: 517 TCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSM-DTHTALVSYKGHNHPVWDVSF 575
Query: 399 TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+ G Y ATA ++ Y ++ +SF P+ +F G D+T
Sbjct: 576 SPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKT 632
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+G L+ V + L D +GKT+A L GH W P+G T + D T R+
Sbjct: 1556 SPEGNLIATVSADHTARLWDR-SGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARL 1614
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421
WDL + L+G+ +RS ++ DGR++ T+ ++ VK+
Sbjct: 1615 WDLS--GRELLTLEGHGNWVRSAEFSPDGRWVLTSSADGTAKLWPVKT 1660
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+P G L+ V + L + G+ +A L H + + P+G TG+ DKT ++
Sbjct: 1351 NPKGDRLLTVSRDKTARLW-TTEGECVAVLADHQGWVREGQFSPDGQWIVTGSADKTAQL 1409
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W++ L + + VL+G+ A+ ++R++ D +Y+ TA V++ +G E +
Sbjct: 1410 WNV--LGKKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWN-NTGRELAVLRHYEK 1466
Query: 434 EISGISFSPDTESLFIGVWDRTYGSL----LEYGRCRNY 468
I FS D + + D T G E G CR +
Sbjct: 1467 NIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGICRGH 1505
Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 396
G+ + +L GH + + + P G AT + D T R+WD ++VAVL G+ G + ++
Sbjct: 1537 GRPLLTLAGHQSIVYQARFSPEGNLIATVSADHTARLWD--RSGKTVAVLYGHQGLVGTV 1594
Query: 397 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443
++ DG+ + TA ++D+ SG E + FSPD
Sbjct: 1595 DWSPDGQMLVTASNDGTARLWDL-SGRELLTLEGHGNWVRSAEFSPD 1640
Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 306 LCLQHSSQ------SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG 359
LC H+S SPDG+ ++ + L D ++ + A L GH ++ + W P+G
Sbjct: 1173 LCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWD-LSSQCFAVLKGHQNWVNNALWSPDG 1231
Query: 360 VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT 407
T + D T R+W + + L+G+ I R++ DG+ + T
Sbjct: 1232 QHIITSSSDGTARVWSRH--GKCLGTLRGHDHNIHGARFSLDGQKIVT 1277
Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S DG+ + V + D ++ K +L GH + + ++P G T ++DKT R+
Sbjct: 1310 SADGRFVFTVSADQTARQWD-ISQKDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARL 1368
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W E VAVL + G +R +++ DG+++ T +++V G +
Sbjct: 1369 WTTE--GECVAVLADHQGWVREGQFSPDGQWIVTGSADKTAQLWNV-LGKKLTVLRGHQD 1425
Query: 434 EISGISFSPDTESLFIGVWDRT 455
+ + FSPD++ + D T
Sbjct: 1426 AVLNVRFSPDSQYIVTASKDGT 1447
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 334 SMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 393
S G+ I L GH + A W +G FAT + D T ++W + E VA L+G+ +
Sbjct: 1042 SFHGELINVLRGHQEAITALDWSADGQYFATASADHTVKLW--QRHGEEVATLRGHEDWV 1099
Query: 394 RSIRYTSDGRYMATA 408
RS+ ++ +++ T+
Sbjct: 1100 RSVHFSPHHQFLVTS 1114
Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP + L+ G + + + + G+ + GH D+ + ++ +G T ++D T R+
Sbjct: 1105 SPHHQFLVTSGQD-NTARIWNFAGEQLTLCQGHADWVRNAEFNCHGQILLTASRDGTARL 1163
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS-------GYEKE 426
WDL + + +G+ +R+ +++ DG+++ T ++D+ S G++
Sbjct: 1164 WDLE--GREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQN- 1220
Query: 427 QEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRC 465
++ +SPD + + D T +G+C
Sbjct: 1221 -------WVNNALWSPDGQHIITSSSDGTARVWSRHGKC 1252
Score = 42.4 bits (98), Expect = 0.008, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 314 SPDGKLLIIVGDNPDGLL-VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 372
SPD + IV + DG V + TG+ +A L + FA+ + +G T + D T
Sbjct: 1433 SPDSQY--IVTASKDGTARVWNNTGRELAVLRHYEKNIFAAEFSADGQFIVTASDDNTAG 1490
Query: 373 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 418
IW++ + V + +G+ G + ++++D RY+ TA + ++D
Sbjct: 1491 IWEI--VGREVGICRGHEGPVYFAQFSADSRYILTASVDNTARIWD 1534
Score = 40.0 bits (92), Expect = 0.043, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 396
G+ +A+L GH D+ + + P+ T QD T RIW+ E + + +G+ +R+
Sbjct: 1086 GEEVATLRGHEDWVRSVHFSPHHQFLVTSGQDNTARIWNFA--GEQLTLCQGHADWVRNA 1143
Query: 397 RYTSDGRYMATAEPADFVHVYDVK 420
+ G+ + TA ++D++
Sbjct: 1144 EFNCHGQILLTASRDGTARLWDLE 1167
Score = 40.0 bits (92), Expect = 0.044, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG++L+ ++ L D ++G+ + +L GH ++ ++ + P+G T + D T ++
Sbjct: 1597 SPDGQMLVTASNDGTARLWD-LSGRELLTLEGHGNWVRSAEFSPDGRWVLTSSADGTAKL 1655
Query: 374 WDLRNLSE 381
W ++ L +
Sbjct: 1656 WPVKTLPQ 1663
Score = 37.4 bits (85), Expect = 0.29, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 314 SPDGKLLIIVGDNPDGLL-VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 372
SPDG+ I+ + DG V S GK + +L GH + + +G T + D T R
Sbjct: 1228 SPDGQH--IITSSSDGTARVWSRHGKCLGTLRGHDHNIHGARFSLDGQKIVTYSTDNTAR 1285
Query: 373 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 432
+W + +L+G+ + +++DGR++ T +D+ ++ I
Sbjct: 1286 LWTKE--GTLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDI----SQKDTITLT 1339
Query: 433 GE---ISGISFSPDTESLFIGVWDRTYGSLLEYGRC 465
G + F+P + L D+T G C
Sbjct: 1340 GHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTEGEC 1375
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 315 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 374
PDG L+ G++ G + D +GK+I L H+ A AW PNG AT + D T +IW
Sbjct: 317 PDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
Query: 375 DLRNLSESVAVLKGNLGAIRSIRYTSDG--RYMATA 408
DLR +S + + + + +RY G R++AT+
Sbjct: 377 DLRKVSLA-HTIPAHSSLVSDVRYIESGVNRFIATS 411
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 315 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 374
P G L+ + L D TG + GH + F+ A P+G ++G D RIW
Sbjct: 275 PSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIW 334
Query: 375 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420
DLR+ +S+ VL ++ I ++ ++ +G +AT+ D V ++D++
Sbjct: 335 DLRS-GKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR 379
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
L GHL A+HP+G + + D T R+WD+ E + + +G+ I SI DG
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVE-LLMQEGHSEGIFSIACQPDG 319
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWD 453
+++ ++D++SG + +I +++SP+ L + +WD
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWD 377
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 345 GHLDFSFASAWHP---------NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 395
GH D W+P +T ATG D T +W S + L+G+L +
Sbjct: 212 GHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQ-STPLLRLEGHLARVGR 270
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443
+ + G Y+ +A ++DV +G E + I I+ PD
Sbjct: 271 VAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPD 318
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG+L++ D+ L D + + I S C H F +HP+G A D T ++
Sbjct: 153 SPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKV 212
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD+R +++ + + + G + S+ + G Y+ TA + V D+ G G
Sbjct: 213 WDIR-MNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQG 271
Query: 434 EISGISFSPDTESLFIG-------VWDR-----TYGSLLEY 462
++ + FS + E G VW +Y LL+Y
Sbjct: 272 PVTSVKFSREGEFFASGGSDEQVMVWKTNFDSASYADLLKY 312
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
GH D + + P+G A+ ++DKT R+W ES V K + G +RS+ ++ DG
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGEST-VFKAHTGTVRSVSFSGDG 114
Query: 403 RYMATAEPADFVHVYDV---KSGYEKEQEIDFFGEISGISFSPD-------TESLFIGVW 452
+ + TA + V+ V K + Q I++ + FSPD ++ I +W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 453 DRT----YGSLLEYGRCRNY 468
D+T S E+G N+
Sbjct: 172 DKTSRECIHSFCEHGGFVNF 191
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S DG+ L+ D+ + K + SL H+++ + + P+G + + DKT ++
Sbjct: 111 SGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKL 170
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD + E + + G + + + G +A A + V V+D++ + G
Sbjct: 171 WD-KTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSG 229
Query: 434 EISGISFSPDTESLFIGVWDRTYGSL 459
++ +SF P L D T L
Sbjct: 230 VVNSLSFHPSGNYLITASNDSTLKVL 255
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404
GH D ++PN A+G+ D IW+++ + + G+ AI S+ ++ G
Sbjct: 16 GHRDTVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFV-GHKDAILSVDFSPSGHL 74
Query: 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+A+A V ++ E G + +SFS D +SL D+T
Sbjct: 75 IASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKT 125
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
GHL + +HPN ATG+ D+T R+WD+ N V + G+ G I S+ ++ +G
Sbjct: 624 FAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSPNG 682
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
R++AT V ++D+ G + + + FS D E L G D T
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 735
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L D + G + GH + + PNG ATG D +WD+ + V LKG+
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH-GLMVGELKGHT 712
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 450
+ S+R++ DG +A+ + V ++D +E + DF I+ +++ L +G
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLG 772
Query: 451 VW 452
+
Sbjct: 773 TY 774
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Query: 311 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 370
+S SPD L+ ++ L T + GH + + + P G F +G D+
Sbjct: 550 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 609
Query: 371 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R+W + + + + G+L + RY + Y+AT V ++DV +G
Sbjct: 610 ARLWATDHY-QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 668
Query: 431 FFGEISGISFSPDTESLFIG-------VWDRTYGSLL 460
G I ++FSP+ L G +WD +G ++
Sbjct: 669 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMV 705
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+G+ L + LL D G + L GH D + + +G A+G+ D T R+
Sbjct: 679 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 738
Query: 374 WDLRNLSESV-----AVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 415
WD E + G++ + + G YM + P +H
Sbjct: 739 WDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLH 785
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404
GHL +HPN ATG+ DKT R+W + SV + G+ G + S+ ++ +G+Y
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 444
+A+A + ++D+ SG ++ I+ ++FSPD+
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS 522
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+GK L G++ L D +G L GH D + + P+ A+ + D + R+
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRV 536
Query: 374 WDLRNL----------SESVAVLKGNLGAIRSIRYTSDGRYMAT 407
WD+RN SE V V G + + S+++ + + T
Sbjct: 537 WDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVT 580
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L + G ++ GH + A+ PNG A+ +D+ ++WDL + L+G+
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS-GTLYKELRGHT 510
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423
I S+ ++ D +A+A + V V+D+++ Y
Sbjct: 511 DNITSLTFSPDSGLIASASMDNSVRVWDIRNTY 543
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 357 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHV 416
P + FA+G+ D+T R+W + + + + G+L + +++ + Y+AT V +
Sbjct: 394 PYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 417 YDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRTYGSL 459
+ + G G + ++FSP+ + L + +WD G+L
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
GHL + +HPN ATG+ D+T R+WD+ N V + G+ G I S+ ++ +G
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSPNG 681
Query: 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
R++AT V ++D+ G + + + FS D E L G D T
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 734
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L D + G + GH + + PNG ATG D +WD+ + V LKG+
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH-GLMVGELKGHT 711
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 450
+ S+R++ DG +A+ + V ++D +E + DF I+ +++ L +G
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLG 771
Query: 451 VW 452
+
Sbjct: 772 TY 773
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Query: 311 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 370
+S SPD L+ ++ L T + GH + + + P G F +G D+
Sbjct: 549 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 371 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R+W + + + + G+L + R+ + Y+AT V ++DV +G
Sbjct: 609 ARLWATDHY-QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 667
Query: 431 FFGEISGISFSPDTESLFIG-------VWDRTYGSLL 460
G I ++FSP+ L G +WD +G ++
Sbjct: 668 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMV 704
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+G+ L + LL D G + L GH D + + +G A+G+ D T R+
Sbjct: 678 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 737
Query: 374 WDLRNLSESV-----AVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 415
WD E + G++ + + G YM + P +H
Sbjct: 738 WDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLH 784
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 27/247 (10%)
Query: 242 GSPSGAVHFTASNND-----CGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLC----- 291
G ++H +S N+ G ++ + K L H R + V++S IL C
Sbjct: 367 GCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGF 426
Query: 292 -RLLNFMTEKVIICLLCLQHSSQ------SPDGKLLIIVGDNPDGLLVDSMTGKTIASLC 344
RL + T+ I+ H++ SP G + L D +
Sbjct: 427 TRLWSKDTKSTIVKYAG--HNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFV 484
Query: 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404
GH + ++HPN ATG+ D T R+WD+R +V V + + ++ ++DG
Sbjct: 485 GHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRT-GGTVRVFNAHHSPVSALCMSADGLS 543
Query: 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDRTYG 457
+A+A+ + + V+D++S + + + +SFS D + L G WD TY
Sbjct: 544 LASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTYR 603
Query: 458 SLLEYGR 464
+ L G
Sbjct: 604 NNLSDGE 610
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404
GHL +HPN ATG+ DKT R+W + SV + G+ G + S+ ++ +G+Y
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLSFSPNGKY 482
Query: 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 444
+A+A + ++D+ SG ++ I+ ++FSPD+
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDS 522
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 357 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHV 416
P + FA+G+ D+T R+W + + + + G+L + +++ + Y+AT V +
Sbjct: 394 PFSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 417 YDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRTYGSLLEYGR 464
+ + G G + +SFSP+ + L + +WD G+L + R
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+GK L G++ L D +G L GH D + A+ P+ A+ + D + R+
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRV 536
Query: 374 WDLRNL----------SESVAVLKGNLGAIRSIRYTSDGRYMAT 407
WD+R+ E V V G + + S+++ + + T
Sbjct: 537 WDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVT 580
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L + G ++ GH + ++ PNG A+ +D+ ++WDL + L+G+
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS-GTLFKELRGHT 510
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
+I S+ ++ D +A+A + V V+D++S GE+ G+
Sbjct: 511 DSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 558
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 320 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
L++ G + + D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 73 LVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRR 132
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
+ KG+ + I+++ DG+++ TA + ++D+ G ++ + G ++GI
Sbjct: 133 KG-CIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGI 191
Query: 439 SFSPDTESLFIGVWDRT 455
F P+ L G DRT
Sbjct: 192 EFHPNEFLLASGSSDRT 208
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L+ ++ L D GK H +HPN A+G+ D+T +
Sbjct: 152 SPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQF 211
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 432
WDL + V+ A+RSI + DG Y+ + D +H + G+E + D F
Sbjct: 212 WDLETF-QLVSSTSPGASAVRSISFHPDGSYLFCSS-QDMLHAF----GWEPIRCFDTF 264
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S DG+++ + L DS TG+ + L GH +A +++P A+G+ D+T RI
Sbjct: 474 SKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRI 533
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
W++ + + V L+G+ GAI + Y S G + +A V V+ + SG
Sbjct: 534 WNV-DTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 396
G I++LC F H N A+G D R+WDL N S S+AV +G+ IR +
Sbjct: 145 GGVISALC------FGK--HQNTWVLASGADDSRVRLWDL-NSSRSMAVFEGHSSVIRGL 195
Query: 397 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF---SPDTESLF----- 448
+ G ++ + V V+++K + I F + I + P+ + L+
Sbjct: 196 TFEPTGSFLLSGSRDKTVQVWNIKK-RSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEG 254
Query: 449 --IGVWDRTYGSLLEYGRCRNYSYLDSLI 475
I WD GS L+ G +S +++I
Sbjct: 255 NLILAWDWKSGSRLDPGVDTTHSETNAII 283
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS--ESVAVLKG 388
L D + +++A GH + P G +G++DKT ++W+++ S ++ V
Sbjct: 173 LWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFH- 231
Query: 389 NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
++ AI + + + + TA + + +D KSG + +D
Sbjct: 232 SVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVD 273
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR---NLSESVAVLKGNLGAIRSI 396
L GH D +GV ATG +D T R+W+L N+ + + V G+ ++ ++
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAV 416
>sp|Q7PS24|CIAO1_ANOGA Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3
Length = 341
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 340 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVA---VLKGNLGAIRSI 396
+ +L GH +++AWHP G FA+ +DKT R+W+ + VA + G+ IR +
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIREL 66
Query: 397 RYTSDGRYMATAEPADFVHVYDVKSG 422
++ G Y+A+A V V+D KSG
Sbjct: 67 AWSCCGHYLASASFDTTVAVWDKKSG 92
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG+L++ D+ L D + + I S C H F +HP+G A D T ++
Sbjct: 153 SPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKV 212
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
WD+R +++ + + + G + S+ + G Y+ TA + V D+ G
Sbjct: 213 WDIR-MNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEG 260
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402
GH D + + P+G A+ ++DKT R+W ES A K + G +RS+ ++ DG
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTA-FKAHTGTVRSVSFSGDG 114
Query: 403 RYMATAEPADFVHVYDV---KSGYEKEQEIDFFGEISGISFSPD-------TESLFIGVW 452
+ + TA + V+ V K + Q I++ + FSPD ++ I +W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 453 DRT----YGSLLEYGRCRNY 468
D+T S E+G N+
Sbjct: 172 DKTSRECIQSFCEHGGFVNF 191
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S DG+ L+ D+ + K + SL H+++ + + P+G + + DKT ++
Sbjct: 111 SGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKL 170
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD + E + + G + + + G +A A + V V+D++ + G
Sbjct: 171 WD-KTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSG 229
Query: 434 EISGISFSPDTESLFIGVWDRTYGSL-LEYGR 464
++ +SF P L D T L L GR
Sbjct: 230 VVNSLSFHPSGNYLITASNDSTLKVLDLLEGR 261
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404
GH D A ++ N A+G+ D +W+++ + + G+ AI S+ ++ G
Sbjct: 16 GHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFV-GHKDAILSVDFSPSGHL 74
Query: 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+A+A V ++ E G + +SFS D +SL D+T
Sbjct: 75 IASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKT 125
>sp|A8IZG4|CIAO1_CHLRE Probable cytosolic iron-sulfur protein assembly protein CIAO1
homolog OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_130093 PE=3 SV=1
Length = 352
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 332 VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES-----VAVL 386
+D T + I +L GH D + AW P G A+ + DKT RIW R S A+L
Sbjct: 1 MDPFTLEPIGALSGHDDRVWNVAWSPQGDMLASCSGDKTVRIWSRRQPRPSEQWYCSAIL 60
Query: 387 -KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG-YEKEQEIDFF-GEISGISFSPD 443
+ + IRS+ ++ GR +ATA V V+++ SG +E+ E++ E+ ++++PD
Sbjct: 61 DQCHTRTIRSVAWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPD 120
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 354 AWHPNGVTFATGNQDKTCRIWDLRN-LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 412
AW P G AT + D T +W+L + + E VA L+G+ ++ + + DGR +AT
Sbjct: 72 AWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIATCGRDR 131
Query: 413 FVHVYDVKSGYEKE 426
V +++ G E E
Sbjct: 132 SVWIWESMPGREFE 145
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 308 LQHSSQSPDGKLLIIVGDNPDGLLVDSMTG--KTIASLCGHLDFSFASAWHPNGVTFATG 365
++ + SP G+ L + + + +G + +A L GH + AW+P+G AT
Sbjct: 68 IRSVAWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIATC 127
Query: 366 NQDKTCRIWDL---RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 417
+D++ IW+ R E V V +G+ ++++ + G + +A D + ++
Sbjct: 128 GRDRSVWIWESMPGREF-ECVDVKQGHSQDVKAVTWHPSGELLVSAGYDDTIKLW 181
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L D+ L D + GK I H +HPN A+G+ D+T ++
Sbjct: 156 SPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKL 215
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-- 431
WDL + + +G G +RS+ + DG + + + + VY G+E ++ D
Sbjct: 216 WDLEKFN-MIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY----GWEPDRCFDVVH 269
Query: 432 --FGEISGISFS 441
+G++S ++ S
Sbjct: 270 VGWGKVSDLAIS 281
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
L D K + +L GH + +HP G A+G+ D ++WD+R V KG+
Sbjct: 89 LWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR-KGCVFRYKGHT 147
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 450
A+R + ++ DG+++A+A V ++D+ +G + ++ + F P+ L G
Sbjct: 148 QAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASG 207
Query: 451 VWDRT 455
DRT
Sbjct: 208 SADRT 212
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 336 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 395
TGK + GH +++P ATG+ D T ++WD+++ E V L G+L I S
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS-GEEVVTLTGHLAEIIS 224
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+ + + G + T V V+D +G + I EIS FS D + G D+T
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKT 284
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 321 IIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL 379
II G ++V D+ TG+ + +L GH ++ + + TG+ DKTC +WD +
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS- 292
Query: 380 SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 439
+ VA L G+ I + G+ +ATA VY+ + + GEIS IS
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 440 FSPDTESLFIG-------VWDRTYGSLLE 461
F+P L G +WD G L+
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 333 DSMTGKTIASLCGHLDFSFASAWH-PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLG 391
D+ +G+ + +L GH + +A A++ P G ATG+ DKTC++W + +G+
Sbjct: 120 DTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAET-GKCYHTFRGHTA 178
Query: 392 AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV 451
I + + +AT ++D++SG E EI +SF + + G
Sbjct: 179 EIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGS 238
Query: 452 WDRT 455
+D T
Sbjct: 239 FDHT 242
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 320 LIIVGD-NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
LI+ G + +L D+ +GK +A+L GH D S + G AT + D T R+++
Sbjct: 275 LILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATT 334
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
+ + L+G+ G I I + G + T ++DV++G
Sbjct: 335 -RKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTG 377
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 317 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 376
GKL+ + + ++ T K I L GH +++P G TG+ DKT RIWD+
Sbjct: 315 GKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Query: 377 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 417
+ + + VL+G+ I S + G + T + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 312 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
S +P G L+ + + D TG+ + L GH D F+ A++ G TG++D +C
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSC 411
Query: 372 RIW 374
RIW
Sbjct: 412 RIW 414
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 354 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD-GRYMATAEPAD 412
A + G F TG+ D+TC++WD + E + L+G+ + +I + + G +AT
Sbjct: 99 ALNKAGSCFITGSYDRTCKVWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 413 FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
++ ++G EI +SF+P + + G D T
Sbjct: 158 TCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTT 200
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 355 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFV 414
+HP+G+ F TG D +IWDL+N + + A G+ A+RSI ++ +G Y+AT V
Sbjct: 346 FHPDGLIFGTGAADAVVKIWDLKNQTVA-AAFPGHTAAVRSIAFSENGYYLATGSEDGEV 404
Query: 415 HVYDVKS-------GYEKEQEIDFFGEISGISFSPDTESLFIGV 451
++D++ E++Q I+ S S D F+G+
Sbjct: 405 KLWDLRKLKNLKTFANEEKQPIN--------SLSFDMTGTFLGI 440
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 310 HSSQSP-------DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTF 362
HS+ +P G L + G + +L D + + + GH A HP+ +T
Sbjct: 207 HSTGTPGITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITA 266
Query: 363 ATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
+ + D R+W + S S A++ + + I + G Y+ +A + D++SG
Sbjct: 267 ISASADSHIRVWSATD-SSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSG 325
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 316 DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 375
DG L G + + D TG++I GH+ F+ + PNG A+G +D CRIWD
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 376 LRNLSESVAVLKGNLGAIRSIRY-TSDGRYMATA 408
LR + +S+ ++ + + ++Y +G ++ATA
Sbjct: 452 LR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATA 484
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 396
G + + GHLD A+HP+G T + DKT R+WD+ N + + +G+ ++ I
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGAELLLQEGHSRSVYGI 387
Query: 397 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS---GISFSPDTESLFIG--- 450
+ DG A+ V+D+++G + F G I ++FSP+ L G
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTG---RSILVFQGHIKPVFSVNFSPNGYHLASGGED 444
Query: 451 ----VWD 453
+WD
Sbjct: 445 NQCRIWD 451
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 315 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 374
P GK L + L D TG + GH + A+ +G A+ D R+W
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVW 408
Query: 375 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420
DLR S+ V +G++ + S+ ++ +G ++A+ + ++D++
Sbjct: 409 DLRT-GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 339 TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRY 398
TIA L H + + + P AT + D+T ++W + + +G+L + + +
Sbjct: 290 TIAVLKDHKERATDVVFSPVDDCLATASADRTAKLW--KTDGTLLQTFEGHLDRLARVAF 347
Query: 399 TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443
G+Y+ T ++D+ +G E + + GI+F D
Sbjct: 348 HPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 336 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 395
TGK + GH +++P ATG+ D T ++WD++N E V L+G+ I S
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN-GEEVYTLRGHSAEIIS 224
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
+ + + G + T V V+D +G + I EIS SF+ D + G D+T
Sbjct: 225 LSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKT 284
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 321 IIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL 379
II G ++V D+ TG+ + L GH +++++ + TG+ DKTC++WD N
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN- 292
Query: 380 SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 439
+ VA L G+ I + G+ +ATA ++ + + GEIS IS
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352
Query: 440 FSPDTESLFIG-------VWDRTYGSLLE 461
F+P L G +WD G L+
Sbjct: 353 FNPQGNHLLTGSSDKTARIWDAQTGQCLQ 381
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 312 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
S +P G L+ + + D+ TG+ + L GH D F+ A++ G TG++D TC
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTC 411
Query: 372 RIW 374
RIW
Sbjct: 412 RIW 414
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 317 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 376
GKL+ + + + T K IA L GH +++P G TG+ DKT RIWD
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA 374
Query: 377 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 417
+ + + VL+G+ I S + G + T + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 39.3 bits (90), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 354 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD-GRYMATAEPAD 412
A + +G F TG+ D+TC++WD + E + L+G+ + +I + + G +AT
Sbjct: 99 ALNKSGSCFITGSYDRTCKLWDTAS-GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 413 FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455
++ V++G EI +SF+P + + G D T
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTT 200
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
+ D ++G + ++ GH ++ F +++P A+ D+T R+WD + V + +
Sbjct: 281 IFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKT-GLCVKCIPAHS 339
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLF- 448
I SI Y DG MAT+ + V+D SG + +D ++ + FSP+ + L
Sbjct: 340 DPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLS 399
Query: 449 ------IGVWDRTYGSLLEY 462
+ +WD L+Y
Sbjct: 400 AQLDSSLKLWDPKKAKPLKY 419
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+P L+ G + + D TG + + H D + +++ +G T AT + D R+
Sbjct: 306 NPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRV 365
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420
WD + S ++ + + + ++ +G+Y+ +A+ + ++D K
Sbjct: 366 WDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPK 412
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
LV +++G T + + FS+ G TG+ DK ++W+ +++ + L
Sbjct: 205 LVKTISGHTKS--VSVIKFSYC------GKYLGTGSADKQIKVWNTVDMTYLQTLASHQL 256
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
G I ++S+ +++A+A V ++DV SG
Sbjct: 257 G-INDFSWSSNSQFIASASDDTTVKIFDVISG 287
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+P G + + L + + + + GHL +HPN ATG+ D+T R+
Sbjct: 501 APHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRL 560
Query: 374 WDLRNLS-ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 432
WD N++ +SV ++ G+ G++ S+ +++ GRY+A+ + ++D+ +G +
Sbjct: 561 WD--NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHT 618
Query: 433 GEISGISFSPD 443
++ I+FS D
Sbjct: 619 STVTTITFSRD 629
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+P+ LL+ ++ L +T + + GH+ + + P+G F + + DKT R+
Sbjct: 459 APEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARL 518
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W + ++++ V G+L + +++ + Y+AT V ++D +G G
Sbjct: 519 W-ATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKG 577
Query: 434 EISGISFSPDTESLFIG-------VWDRTYGSLL 460
+S ++FS L G +WD + GSL+
Sbjct: 578 SVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLV 611
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Query: 331 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390
++D +G+ SL GH + A+ P + ++D T R+W L S V +G++
Sbjct: 434 MLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWS-CVVTYRGHV 492
Query: 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 450
+ +R+ G Y + ++ S + ++ + F P++ + G
Sbjct: 493 YPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATG 552
Query: 451 VWDRT 455
DRT
Sbjct: 553 SSDRT 557
>sp|P36408|GBB_DICDI Guanine nucleotide-binding protein subunit beta OS=Dictyostelium
discoideum GN=gpbA PE=1 SV=1
Length = 347
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 312 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
S SPD I + L D +GK + + GH A + PNG++F TG+ D +C
Sbjct: 198 SVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASC 257
Query: 372 RIWDLRNLSESVAVLKGN-LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
R++D+R E + N L I S+ ++ GR++ +V+D G
Sbjct: 258 RLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTG 317
Query: 431 FFGEISGISFSPDTESLFIGVWD 453
+S + D +L G WD
Sbjct: 318 HGNRVSCLGVPTDGMALCTGSWD 340
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 312 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
S S DGKLL+ DGL + + + S + A+ P A G D C
Sbjct: 79 SASQDGKLLVW-----DGLTTNKVHAIPLRS-----SWVMTCAYSPTANFVACGGLDNIC 128
Query: 372 RIWDLRNLSESVAV---LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 428
I++LR+ + + V L + G + R+ +D R + T+ ++DV++G + +
Sbjct: 129 SIYNLRSREQPIRVCRELNSHTGYLSCCRFLND-RQIVTSSGDMTCILWDVENGTKITEF 187
Query: 429 IDFFGEISGISFSPDTESLFIGVWDRTYGSL-LEYGRC 465
D G++ +S SPD G D T L G+C
Sbjct: 188 SDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKC 225
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 18/187 (9%)
Query: 280 NVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT 339
N+ S I +CR LN T + C + G + I L D G
Sbjct: 132 NLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSGDMTCI--------LWDVENGTK 183
Query: 340 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYT 399
I H + + P+ F +G D T ++WDLR+ + V G+ I +++Y
Sbjct: 184 ITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRS-GKCVQTFTGHEADINAVQYF 242
Query: 400 SDGRYMATAEPADFVHVYDVKSGYEKEQEI--DFFGEISGISFSPDTESLFIG------- 450
+G T ++D+++ E Q + I+ + FS LF G
Sbjct: 243 PNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCN 302
Query: 451 VWDRTYG 457
VWD G
Sbjct: 303 VWDTLKG 309
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D LL+ D+ + D +GK + +L GH ++ F ++P +G+ D++ RI
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD++ + + L + + ++ + DG + ++ ++D SG + ID
Sbjct: 156 WDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 434 -EISGISFSPDTESLF-------IGVWDRTYGSLLEYGRC-RNYSY 470
+S + FSP+ + + + +WD + G L+ C +N Y
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY 260
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 455 TYGSLLE 461
G L+
Sbjct: 159 KTGKCLK 165
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 320 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378
LI+ G + V D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Query: 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 438
+ K + A+R +R++ DG+++A+A V ++D+ +G + G ++ +
Sbjct: 137 -KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVV 195
Query: 439 SFSPDTESLFIGVWDRT 455
F P L G DRT
Sbjct: 196 EFHPSEYLLASGSSDRT 212
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L D+ L D GK + GH +HP+ A+G+ D+T R
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRF 215
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-- 431
WDL V+ ++ +R I + DG + D + VY G+E E+ D
Sbjct: 216 WDLEKF-HVVSCIEEEATPVRCILFNPDGCCLYGGF-QDSLRVY----GWEPERCFDVVV 269
Query: 432 --FGEIS----------GISFSPDTESLFIGVWDR-TYGSLLEYGRCRNYSYL 471
+G+++ G+SF+ T S F+ R T + +G RN L
Sbjct: 270 VNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELL 322
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D KL+ D+ + D +GK + +L GH ++ F +++P +G+ D+ RI
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD+ N E ++ + + + + DG + + V ++D +G Q ++
Sbjct: 157 WDV-NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG----QLLNTIS 211
Query: 434 -----EISGISFSPDTESLFIGVWDRT 455
E+S + FSP+ + + G D T
Sbjct: 212 TEDGKEVSFVKFSPNGKFVLAGTLDNT 238
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDGK L + + + GK +L GH + AW + + + DKT +I
Sbjct: 55 SPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKI 114
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD+ + + V LKG+ + + + + + + V ++DV +G +
Sbjct: 115 WDVES-GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSD 173
Query: 434 EISGISFSPDTESLFIG-------VWDRTYGSLL 460
++G+ F+ D + G +WD T G LL
Sbjct: 174 PVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GHL + + P+G A+ + DKT +IW + + L+G+ I I ++ D
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD-GKFERTLEGHKEGISDIAWSQD 99
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 454
+ + +A + ++DV+SG + + G+SF+P + + G +D
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDE 152
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 386 LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG-YEKEQEIDFFGEISGISFSPDT 444
LKG+L +I S++++ DG+++A+A + ++ G +E+ E G IS I++S D+
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEG-ISDIAWSQDS 100
Query: 445 ESL-------FIGVWDRTYGSLLE 461
+ + I +WD G +++
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVK 124
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 312 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 371
+ SPDG+L+ + L D+ TG + GHLD ++ A+ P+G + A+G+ DK+
Sbjct: 422 AMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSL 481
Query: 372 RIWDL---RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422
++WDL R+ S A G+ + S+ ++ DG ++ + V +D ++G
Sbjct: 482 KLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG L ++ + D T K + GH ++ + +G +G+ DK +I
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 374 WDLRNLSESVAVLKGNLG---AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430
WD+ + + +G + S+ + DGR +A + V ++D ++GY E+
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 431 FFGEISGISFSPDTESLFIGVWDRT 455
+ ++FSPD +SL G D++
Sbjct: 456 HLDSVYSVAFSPDGKSLASGSLDKS 480
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGY-------EKEQEIDFFGEISGISFSPDTESLF 448
+ +++DG+Y+AT +YDV +G E E++ D + I + FSPD L
Sbjct: 287 VNFSNDGKYLATGCNRS-AQIYDVDTGKKVHAFVDESEKDGDLY--IRSVCFSPDGNYLA 343
Query: 449 IGVWDRT 455
G D+T
Sbjct: 344 TGAEDKT 350
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D +LL+ D+ + + TGK++ +L GH ++ F ++P +G+ D++ RI
Sbjct: 123 SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI-DFF 432
WD+R + + L + + ++ + DG + ++ ++D SG + I D
Sbjct: 183 WDVRT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 241
Query: 433 GEISGISFSPDTESLFIGVWDRTYGSLLEY--GRC 465
+S + FSP+ + + D T L +Y G+C
Sbjct: 242 PPVSFVKFSPNGKYILAATLDNTL-KLWDYSKGKC 275
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH A + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 125
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
R + + + V+++ +G + + +F+P + + G +WD
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 455 TYGSLLE 461
G L+
Sbjct: 186 RTGKCLK 192
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D LL+ D+ + D +GK + +L GH ++ F ++P +G+ D++ RI
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD++ + + L + + ++ + DG + ++ ++D SG + ID
Sbjct: 156 WDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 434 -EISGISFSPDTESLFIGVWDRTYGSLLEY--GRC 465
+S + FSP+ + + D T L +Y G+C
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTL-KLWDYSKGKC 248
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 455 TYGSLLE 461
G L+
Sbjct: 159 KTGKCLK 165
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D LL+ D+ + D +GK + +L GH ++ F ++P +G+ D++ RI
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD++ + + L + + ++ + DG + ++ ++D SG + ID
Sbjct: 156 WDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 434 -EISGISFSPDTESLFIGVWDRTYGSLLEY--GRC 465
+S + FSP+ + + D T L +Y G+C
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTL-KLWDYSKGKC 248
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 455 TYGSLLE 461
G L+
Sbjct: 159 KTGKCLK 165
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D LL+ D+ + D +GK + +L GH ++ F ++P +G+ D++ RI
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD++ + + L + + ++ + DG + ++ ++D SG + ID
Sbjct: 156 WDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 434 -EISGISFSPDTESLFIGVWDRTYGSLLEY--GRC 465
+S + FSP+ + + D T L +Y G+C
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTL-KLWDYSKGKC 248
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 455 TYGSLLE 461
G L+
Sbjct: 159 KTGKCLK 165
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
S D LL+ D+ + D +GK + +L GH ++ F ++P +G+ D++ RI
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
WD++ + + L + + ++ + DG + ++ ++D SG + ID
Sbjct: 156 WDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 434 -EISGISFSPDTESLFIGVWDRTYGSLLEY--GRC 465
+S + FSP+ + + D T L +Y G+C
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTL-KLWDYSKGKC 248
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 401
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 402 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 454
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 455 TYGSLLE 461
G L+
Sbjct: 159 KTGKCLK 165
>sp|Q8CGF6|WDR47_MOUSE WD repeat-containing protein 47 OS=Mus musculus GN=Wdr47 PE=1 SV=2
Length = 920
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 317 GKLLIIVGDNPDGL-LVDSMTGKTIASLCGHLDFSFAS-AWHPNGVTFATGNQDKTCRIW 374
G +LI G + D G+ + +L GH A W +G A+G+QDKT R W
Sbjct: 725 GAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTW--SGWMIASGSQDKTVRFW 782
Query: 375 DLRNLSESVAV---LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 431
DLR S V G A+ S+ GR +AT + +YD++ G +
Sbjct: 783 DLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPH 842
Query: 432 FGEISGISFSPDTESLFIGVWD 453
++ + FSP L G +D
Sbjct: 843 SSDVRSVRFSPGAHYLLTGSYD 864
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 336 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 395
TG +AS+ A P+G ATG +D +C ++D+R V + +RS
Sbjct: 800 TGSAVASV----------AVDPSGRLLATGQEDSSCMLYDIRG-GRMVQSYHPHSSDVRS 848
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE 434
+R++ Y+ T + V D++ K+ + GE
Sbjct: 849 VRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPLMVVGE 887
>sp|O94967|WDR47_HUMAN WD repeat-containing protein 47 OS=Homo sapiens GN=WDR47 PE=1 SV=1
Length = 919
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 317 GKLLIIVGDNPDGL-LVDSMTGKTIASLCGHLDFSFAS-AWHPNGVTFATGNQDKTCRIW 374
G +LI G + D G+ + +L GH A W +G A+G+QDKT R W
Sbjct: 724 GAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTW--SGWMIASGSQDKTVRFW 781
Query: 375 DLRNLSESVAV---LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 431
DLR S V G A+ S+ GR +AT + +YD++ G +
Sbjct: 782 DLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPH 841
Query: 432 FGEISGISFSPDTESLFIGVWD 453
++ + FSP L G +D
Sbjct: 842 SSDVRSVRFSPGAHYLLTGSYD 863
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 336 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 395
TG +AS+ A P+G ATG +D +C ++D+R V + +RS
Sbjct: 799 TGSAVASV----------AVDPSGRLLATGQEDSSCMLYDIRG-GRMVQSYHPHSSDVRS 847
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE 434
+R++ Y+ T + V D++ K+ I GE
Sbjct: 848 VRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGE 886
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SP+GK+ G + + D + G + +L GH D ++ ++ P+G A+ ++D+T R+
Sbjct: 610 SPNGKIFATAGQDQTVKIWD-LDGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRL 668
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE---QEID 430
W R+ +++AVL G+ ++ +++ DG+ + + + ++D+ ++ E+
Sbjct: 669 WHWRS-GKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQFGLPEVA 727
Query: 431 FFGEISGISFSPDTESLFIGVWDRT 455
FF G+++ P+ L + D T
Sbjct: 728 FF----GVNWHPNGNLLAVAADDGT 748
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR-NLSESVAVLKGNLGAIRS 395
G+ + GH + + PNG FAT QD+T +IWDL NL ++ LKG+ ++ S
Sbjct: 591 GEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQT---LKGHQDSVYS 647
Query: 396 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF------- 448
+ ++ DG +A+ V ++ +SG + FSPD ++L
Sbjct: 648 VSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQ 707
Query: 449 IGVWDRTYGSLLEYG 463
I +WD + ++G
Sbjct: 708 IRLWDLDGNLIRQFG 722
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 11/147 (7%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
SPDG+ L+ V + L D + G I F WHPNG A D T R+
Sbjct: 693 SPDGQTLVSVCRDGQIRLWD-LDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRL 751
Query: 374 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433
W + E A L G+ + + +T DG+ + ++ V ++ SG ++ +
Sbjct: 752 WTPQG--EIKATLSGHDEFVTRVVFTPDGKQLFSSSSNGSV-IHWSTSGKMLKKYQGYPE 808
Query: 434 EISGISFSPDTESLFIG-------VWD 453
I G++ + + L IG VWD
Sbjct: 809 AIFGLALASNGALLAIGAENNLVKVWD 835
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 321 IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS 380
+ GD L + + G I S+ H D + PNG + ++ T +IW +
Sbjct: 1012 LAAGDEQGNLTLWNFDGTLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVEG-- 1069
Query: 381 ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440
+ + LK + I I + D +++ATA V ++D + G + + G + G+ F
Sbjct: 1070 QLLHTLKSDPLPIDQIAISPDSQWIATAASDGMVRLWD-QQGNLRGEFTSTSGSLLGLDF 1128
Query: 441 SPDTESLF 448
+ + L
Sbjct: 1129 NRQGQWLL 1136
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 314 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 373
+PDGK L N ++ S +GK + G+ + F A NG A G ++ ++
Sbjct: 775 TPDGKQLFSSSSN-GSVIHWSTSGKMLKKYQGYPEAIFGLALASNGALLAIGAENNLVKV 833
Query: 374 WDLRNLSESVAV-LKGNLGAI 393
WD+ S+ V + L LGA+
Sbjct: 834 WDMSPKSDLVNLNLPAVLGAV 854
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,445,075
Number of Sequences: 539616
Number of extensions: 7868229
Number of successful extensions: 30307
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 471
Number of HSP's that attempted gapping in prelim test: 26613
Number of HSP's gapped (non-prelim): 3279
length of query: 475
length of database: 191,569,459
effective HSP length: 121
effective length of query: 354
effective length of database: 126,275,923
effective search space: 44701676742
effective search space used: 44701676742
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)